Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Primates	ANCESTRAL SPECIES	17	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00940000164207.g.b	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000014861.c ##12	ENSGT00940000164207.g.b	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00550000074823.a.i.b	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Macaca	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.b.b.a.a.b.a.a.a #17	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35
Rhesus	MODERN SPECIES	1	KAT14 (ENSMMUG00000023140) #7	ZNF133 (ENSMMUG00000014453) #8	ENSMMUG00000044359 #9	DZANK1 (ENSMMUG00000004139) #10	POLR3F (ENSMMUG00000004143) #11	RBBP9 (ENSMMUG00000004146) #12	SEC23B (ENSMMUG00000012878) #13	DTD1 (ENSMMUG00000012880) #14	SCP2D1 (ENSMMUG00000050690) #15	SLC24A3 (ENSMMUG00000002321) #16	ENSMMUG00000051129 #17	RIN2 (ENSMMUG00000010114) #18	NAA20 (ENSMMUG00000007708) #19	CRNKL1 (ENSMMUG00000007709) #20	CFAP61 (ENSMMUG00000042668) #21	INSM1 (ENSMMUG00000039294) #22	RALGAPA2 (ENSMMUG00000018371) #23	KIZ (ENSMMUG00000002060) #24	XRN2 (ENSMMUG00000011405) #25	NKX2-4 (ENSMMUG00000011409) #26	ENSMMUG00000056728 #27	PAX1 (ENSMMUG00000019409) #28	FOXA2 (ENSMMUG00000010410) #29	SSTR4 (ENSMMUG00000016815) #30	THBD (ENSMMUG00000016814) #31	CD93 (ENSMMUG00000016813) #32	NXT1 (ENSMMUG00000022386) #33	GZF1 (ENSMMUG00000022387) #34	NAPB (ENSMMUG00000022388) #35	CSTL1 (ENSMMUG00000055975) #36	CST11 (ENSMMUG00000022393) #37
Pig-tailed macaque	MODERN SPECIES	130	KAT14 (ENSMNEG00000032919) #7	ZNF133 (ENSMNEG00000042900) #8	ENSMNEG00000038877 #9	DZANK1 (ENSMNEG00000039315) #10	POLR3F (ENSMNEG00000033404) #11	ENSMNEG00000031436 #12	ENSMNEG00000028082	SEC23B (ENSMNEG00000030931) #13	ENSMNEG00000040178 ##14	ENSMNEG00000043133	SLC24A3 (ENSMNEG00000029022) #16	RIN2 (ENSMNEG00000005068) #18	NAA20 (ENSMNEG00000033202) #19	CRNKL1 (ENSMNEG00000037490) #20	CFAP61 (ENSMNEG00000036910) #21	INSM1 (ENSMNEG00000029140) #22	RALGAPA2 (ENSMNEG00000033398) #23	ENSMNEG00000039122	KIZ (ENSMNEG00000028617) #24	XRN2 (ENSMNEG00000040626) #25	NKX2-4 (ENSMNEG00000028280) #26	NKX2-2 (ENSMNEG00000045238) #27	PAX1 (ENSMNEG00000040896) #28	ENSMNEG00000028347	FOXA2 (ENSMNEG00000011763) #29	SSTR4 (ENSMNEG00000038323) #30	CD93 (ENSMNEG00000042460) #32	ENSMNEG00000024687	NXT1 (ENSMNEG00000027745) #33	GZF1 (ENSMNEG00000033117) #34	NAPB (ENSMNEG00000036841) #35
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00940000154327.b.e.b #15	ENSGT00550000074823.a.i.b	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00550000074823.a.i.b	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35
Sooty mangabey	MODERN SPECIES	602	KAT14 (ENSCATG00000044790) #7	ZNF133 (ENSCATG00000044755) #8	ENSCATG00000040967 #9	DZANK1 (ENSCATG00000040828) #10	POLR3F (ENSCATG00000019507) #11	ENSCATG00000035522 ##12	ENSCATG00000003757	SEC23B (ENSCATG00000026216) #13	DTD1 (ENSCATG00000039340) ##14	ENSCATG00000037045	SLC24A3 (ENSCATG00000034515) #16	RIN2 (ENSCATG00000042503) #18	NAA20 (ENSCATG00000027935) #19	CRNKL1 (ENSCATG00000034247) #20	CFAP61 (ENSCATG00000043610) #21	INSM1 (ENSCATG00000037816) #22	RALGAPA2 (ENSCATG00000035357) #23	ENSCATG00000043761	KIZ (ENSCATG00000042535) #24	XRN2 (ENSCATG00000040350) #25	NKX2-4 (ENSCATG00000023019) #26	NKX2-2 (ENSCATG00000041599) #27	PAX1 (ENSCATG00000029185) #28	ENSCATG00000022190	FOXA2 (ENSCATG00000033454) #29	SSTR4 (ENSCATG00000019242) #30	CD93 (ENSCATG00000009216) #32	ENSCATG00000019258	NXT1 (ENSCATG00000019026) #33	GZF1 (ENSCATG00000039279) #34	NAPB (ENSCATG00000042262) #35
Vervet Monkey	MODERN SPECIES	11	KAT14 (ENSCSAG00000011539) #7	ENSCSAG00000018673	ZNF133 (ENSCSAG00000011532) #8	DZANK1 (ENSCSAG00000011523) #10	POLR3F (ENSCSAG00000011513) #11	RBBP9 (ENSCSAG00000011497) ##12	SEC23B (ENSCSAG00000011476) #13	DTD1 (ENSCSAG00000011466) ##14	SCP2D1 (ENSCSAG00000018674) #15	SLC24A3 (ENSCSAG00000011456) #16	ENSCSAG00000011450	RIN2 (ENSCSAG00000011446) #18	NAA20 (ENSCSAG00000011440) #19	CRNKL1 (ENSCSAG00000011434) #20	CFAP61 (ENSCSAG00000011382) #21	INSM1 (ENSCSAG00000018675) #22	RALGAPA2 (ENSCSAG00000011248) #23	KIZ (ENSCSAG00000011135) #24	XRN2 (ENSCSAG00000011094) #25	NKX2-4 (ENSCSAG00000011080) #26	NKX2-2 (ENSCSAG00000011072) #27	PAX1 (ENSCSAG00000011068) #28	FOXA2 (ENSCSAG00000011062) #29	SSTR4 (ENSCSAG00000018676) #30	THBD (ENSCSAG00000018677) #31	CD93 (ENSCSAG00000011058) #32	NXT1 (ENSCSAG00000018678) #33	GZF1 (ENSCSAG00000011054) #34	ENSCSAG00000011037	ENSCSAG00000011032	CST3 (ENSCSAG00000011027)
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Orangutan	MODERN SPECIES	11	OVOL2 (ENSPPYG00000010732)	KAT14 (ENSPPYG00000010733) #7	ZNF133 (ENSPPYG00000010734) #8	DZANK1 (ENSPPYG00000010736) #10	POLR3F (ENSPPYG00000010737) #11	RBBP9 (ENSPPYG00000036673) #12	SEC23B (ENSPPYG00000010739) #13	SMIM26 (ENSPPYG00000033260)	ENSPPYG00000010740 #14	SCP2D1 (ENSPPYG00000010741) #15	SLC24A3 (ENSPPYG00000010743) #16	RIN2 (ENSPPYG00000010745) #18	NAA20 (ENSPPYG00000010746) #19	CRNKL1 (ENSPPYG00000010747) #20	CFAP61 (ENSPPYG00000010748) #21	INSM1 (ENSPPYG00000010750) #22	RALGAPA2 (ENSPPYG00000010751) #23	KIZ (ENSPPYG00000010754) #24	XRN2 (ENSPPYG00000010755) #25	NKX2-4 (ENSPPYG00000010756) #26	NKX2-2 (ENSPPYG00000010757) #27	PAX1 (ENSPPYG00000010758) #28	FOXA2 (ENSPPYG00000040463) #29	SSTR4 (ENSPPYG00000010761) #30	THBD (ENSPPYG00000010762) #31	CD93 (ENSPPYG00000010763) #32	ENSPPYG00000010764	NXT1 (ENSPPYG00000010765) #33	GZF1 (ENSPPYG00000010766) #34	NAPB (ENSPPYG00000010767) #35	CSTL1 (ENSPPYG00000010768) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n.m.a	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00910000147760	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00910000148254	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00910000146844.a.b	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041.g #33
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n.m.a	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00910000147760	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00910000148254	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00910000146844.a.b	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041.g #33
Human	MODERN SPECIES	12	PET117 (ENSG00000232838)	ZNF133 (ENSG00000125846) #8	DZANK1 (ENSG00000089091) #10	POLR3F (ENSG00000132664) #11	RBBP9 (ENSG00000089050) #12	SEC23B (ENSG00000101310) #13	SMIM26 (ENSG00000232388)	ENSG00000284776	DTD1 (ENSG00000125821) #14	SCP2D1 (ENSG00000132631) #15	SLC24A3 (ENSG00000185052) #16	RIN2 (ENSG00000132669) #18	NAA20 (ENSG00000173418) #19	CRNKL1 (ENSG00000101343) #20	CFAP61 (ENSG00000089101) #21	INSM1 (ENSG00000173404) #22	RALGAPA2 (ENSG00000188559) #23	KIZ (ENSG00000088970) #24	XRN2 (ENSG00000088930) #25	NKX2-4 (ENSG00000125816) #26	NKX2-2 (ENSG00000125820) #27	PAX1 (ENSG00000125813) #28	FOXA2 (ENSG00000125798) #29	SSTR4 (ENSG00000132671) #30	THBD (ENSG00000178726) #31	CD93 (ENSG00000125810) #32	NXT1 (ENSG00000132661) #33	GZF1 (ENSG00000125812) #34	NAPB (ENSG00000125814) #35	CSTL1 (ENSG00000125823) #36	CST11 (ENSG00000125831) #37
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cebidae	ANCESTRAL SPECIES	13	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000081177	PET117 (ENSCJAG00000040178)	KAT14 (ENSCJAG00000005057) #7	ZNF133 (ENSCJAG00000005089) #8	DZANK1 (ENSCJAG00000005123) #10	POLR3F (ENSCJAG00000005159) #11	RBBP9 (ENSCJAG00000005170) #12	SEC23B (ENSCJAG00000005179) #13	ENSCJAG00000086632	DTD1 (ENSCJAG00000005306) #14	SLC24A3 (ENSCJAG00000005325) #16	RIN2 (ENSCJAG00000005342) #18	ENSCJAG00000005377 #19	CRNKL1 (ENSCJAG00000005393) #20	CFAP61 (ENSCJAG00000005444) #21	INSM1 (ENSCJAG00000040556) #22	RALGAPA2 (ENSCJAG00000005471) #23	KIZ (ENSCJAG00000005568) #24	XRN2 (ENSCJAG00000005611) #25	NKX2-4 (ENSCJAG00000040336) #26	ENSCJAG00000081459	ENSCJAG00000051781 #27	ENSCJAG00000076879	ENSCJAG00000070559	PAX1 (ENSCJAG00000005773) #28	ENSCJAG00000075555	ENSCJAG00000070048	FOXA2 (ENSCJAG00000005785) #29	THBD (ENSCJAG00000005795) #31	CD93 (ENSCJAG00000005796) #32	NXT1 (ENSCJAG00000044836) #33
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Capuchin	MODERN SPECIES	134													NAA20 (ENSCCAG00000028274) #19	CRNKL1 (ENSCCAG00000027037) #20	CFAP61 (ENSCCAG00000026777) #21	INSM1 (ENSCCAG00000023181) #22	RALGAPA2 (ENSCCAG00000028362) #23	KIZ (ENSCCAG00000031682) #24	ENSCCAG00000036857 #25	NKX2-4 (ENSCCAG00000032197) #26	NKX2-2 (ENSCCAG00000035862) #27	PAX1 (ENSCCAG00000025569) #28	FOXA2 (ENSCCAG00000027576) #29	SSTR4 (ENSCCAG00000019059) #30	THBD (ENSCCAG00000020711) #31	CD93 (ENSCCAG00000034013) #32	NXT1 (ENSCCAG00000015478) #33	GZF1 (ENSCCAG00000035601) #34	NAPB (ENSCCAG00000029344) #35	CSTL1 (ENSCCAG00000033212) #36	CST11 (ENSCCAG00000035766) #37
Mas night monkey	MODERN SPECIES	720									SLC24A3 (ENSANAG00000022086) #16	RIN2 (ENSANAG00000033313) #18	ENSANAG00000021111 #19	CRNKL1 (ENSANAG00000024889) #20	ENSANAG00000023984	ENSANAG00000033104 #21	ENSANAG00000026688 #21	INSM1 (ENSANAG00000021754) #22	ENSANAG00000025204	RALGAPA2 (ENSANAG00000035297) #23	KIZ (ENSANAG00000030324) #24	XRN2 (ENSANAG00000020126) #25	NKX2-4 (ENSANAG00000025954) #26	NKX2-2 (ENSANAG00000031496) #27	PAX1 (ENSANAG00000031911) #28	FOXA2 (ENSANAG00000000151) #29	SSTR4 (ENSANAG00000031033) #30	CD93 (ENSANAG00000031974) #32
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.b #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mouse lemur	MODERN SPECIES	9	ENSMICG00000014350	OVOL2 (ENSMICG00000032455)	KAT14 (ENSMICG00000014378) #7	ZNF133 (ENSMICG00000010713) #8	DZANK1 (ENSMICG00000010726) #10	POLR3F (ENSMICG00000044519) #11	RBBP9 (ENSMICG00000047808) #12	ENSMICG00000042283 #13	ENSMICG00000010750 #13	DTD1 (ENSMICG00000010771) #14	SLC24A3 (ENSMICG00000006014) #16	RIN2 (ENSMICG00000006035) #18	ENSMICG00000006044 #19	CRNKL1 (ENSMICG00000006048) #20	CFAP61 (ENSMICG00000006057) #21	INSM1 (ENSMICG00000037992) #22	RALGAPA2 (ENSMICG00000006077) #23	KIZ (ENSMICG00000008114) #24	XRN2 (ENSMICG00000008126) #25	NKX2-4 (ENSMICG00000032695) #26	NKX2-2 (ENSMICG00000045009) #27	PAX1 (ENSMICG00000016968) #28	FOXA2 (ENSMICG00000030588) #29	CD93 (ENSMICG00000017898) #32	NXT1 (ENSMICG00000044853) #33	GZF1 (ENSMICG00000046070) #34	NAPB (ENSMICG00000017902) #35	CSTL1 (ENSMICG00000017903) #36	CST11 (ENSMICG00000017904) #37	CST8 (ENSMICG00000017905)	CST9 (ENSMICG00000047052)
Lemuriformes_a	ANCESTRAL SPECIES	137				ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.b #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Coquerels sifaka	MODERN SPECIES	693				ZNF133 (ENSPCOG00000015139) #8	DZANK1 (ENSPCOG00000022697) #10	POLR3F (ENSPCOG00000004543) #11	RBBP9 (ENSPCOG00000007470) #12	ENSPCOG00000022506 #13	SMIM26 (ENSPCOG00000010457)	DTD1 (ENSPCOG00000028695) #14	SLC24A3 (ENSPCOG00000012072) #16	RIN2 (ENSPCOG00000022892) #18	NAA20 (ENSPCOG00000014450) #19	CRNKL1 (ENSPCOG00000017608) #20	CFAP61 (ENSPCOG00000025735) #21	INSM1 (ENSPCOG00000013399) #22	RALGAPA2 (ENSPCOG00000016336) #23	KIZ (ENSPCOG00000007399) #24	XRN2 (ENSPCOG00000016468) #25	NKX2-4 (ENSPCOG00000023067) #26
Greater bamboo lemur	MODERN SPECIES	878																INSM1 (ENSPSMG00000008427) #22	RALGAPA2 (ENSPSMG00000008474) #23	ENSPSMG00000008491	KIZ (ENSPSMG00000008514) #24	XRN2 (ENSPSMG00000008572) #25	NKX2-4 (ENSPSMG00000008590) #26	NKX2-2 (ENSPSMG00000008596) #27	PAX1 (ENSPSMG00000008610) #28	FOXA2 (ENSPSMG00000008622) #29	SSTR4 (ENSPSMG00000008634) #30	THBD (ENSPSMG00000008649) #31	CD93 (ENSPSMG00000008660) #32	NXT1 (ENSPSMG00000008668) #33	GZF1 (ENSPSMG00000008681) #34	NAPB (ENSPSMG00000008819) #35	CSTL1 (ENSPSMG00000008917) #36
Bushbaby	MODERN SPECIES	251		ENSOGAG00000002908 #8	DZANK1 (ENSOGAG00000002912) #10	POLR3F (ENSOGAG00000002916) #11	RBBP9 (ENSOGAG00000002919) #12	SEC23B (ENSOGAG00000004546) #13	ENSOGAG00000031912	DTD1 (ENSOGAG00000007972) #14	SCP2D1 (ENSOGAG00000004222) #15	SLC24A3 (ENSOGAG00000026410) #16	RIN2 (ENSOGAG00000011531) #18	NAA20 (ENSOGAG00000011542) #19	CRNKL1 (ENSOGAG00000011544) #20	CFAP61 (ENSOGAG00000011546) #21	ENSOGAG00000031837	INSM1 (ENSOGAG00000034802) #22	RALGAPA2 (ENSOGAG00000011557) #23	KIZ (ENSOGAG00000010591) #24	XRN2 (ENSOGAG00000001068) #25	NKX2-4 (ENSOGAG00000024342) #26	ENSOGAG00000025951	NKX2-2 (ENSOGAG00000029474) #27	PAX1 (ENSOGAG00000033162) #28	FOXA2 (ENSOGAG00000033297) #29	ENSOGAG00000025509	SSTR4 (ENSOGAG00000017105) #30	THBD (ENSOGAG00000026061) #31	CD93 (ENSOGAG00000017109) #32	NXT1 (ENSOGAG00000000717) #33	GZF1 (ENSOGAG00000028389) #34	NAPB (ENSOGAG00000012607) #35
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Glires	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Marmotini	ANCESTRAL SPECIES	5	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000007696.e.a.a.a	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Marmotini_b	ANCESTRAL SPECIES	18	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23
Squirrel	MODERN SPECIES	85	OVOL2 (ENSSTOG00000024979)	PET117 (ENSSTOG00000026528)	KAT14 (ENSSTOG00000010238) #7	ZNF133 (ENSSTOG00000013576) #8	DZANK1 (ENSSTOG00000013579) #10	POLR3F (ENSSTOG00000013588) #11	RBBP9 (ENSSTOG00000000821) #12	SEC23B (ENSSTOG00000025438) #13	SMIM26 (ENSSTOG00000033106)	DTD1 (ENSSTOG00000016282) #14	SLC24A3 (ENSSTOG00000009809) #16	RIN2 (ENSSTOG00000014712) #18	NAA20 (ENSSTOG00000014733) #19	CRNKL1 (ENSSTOG00000014747) #20	CFAP61 (ENSSTOG00000014765) #21	INSM1 (ENSSTOG00000022353) #22
Arctic ground squirrel	MODERN SPECIES	233	ZNF133 (ENSUPAG00010003916) #8	DZANK1 (ENSUPAG00010003927) #10	POLR3F (ENSUPAG00010003952) #11	RBBP9 (ENSUPAG00010003965) #12	SEC23B (ENSUPAG00010003976) #13	SMIM26 (ENSUPAG00010004005)	DTD1 (ENSUPAG00010004007) #14	SCP2D1 (ENSUPAG00010004009) #15	SLC24A3 (ENSUPAG00010004015) #16	RIN2 (ENSUPAG00010004049) #18	NAA20 (ENSUPAG00010004110) #19	CRNKL1 (ENSUPAG00010004128) #20	ENSUPAG00010004164 #21	ENSUPAG00010004266 #21	ENSUPAG00010004279	INSM1 (ENSUPAG00010004284) #22	RALGAPA2 (ENSUPAG00010004307) #23
Eurasian red squirrel	MODERN SPECIES	11	ZNF133 (ENSSVLG00005001176) #8	DZANK1 (ENSSVLG00005001106) #10	POLR3F (ENSSVLG00005001072) #11	RBBP9 (ENSSVLG00005001054) #12	SEC23B (ENSSVLG00005001018) #13	SMIM26 (ENSSVLG00005000999)	ENSSVLG00005000978	DTD1 (ENSSVLG00005000962) #14	SCP2D1 (ENSSVLG00005000950) #15	SLC24A3 (ENSSVLG00005000927) #16	RIN2 (ENSSVLG00005000879) #18	NAA20 (ENSSVLG00005000837) #19	CRNKL1 (ENSSVLG00005000792) #20	ENSSVLG00005000777	CFAP61 (ENSSVLG00005000731) #21	INSM1 (ENSSVLG00005000689) #22	RALGAPA2 (ENSSVLG00005000611) #23	ENSSVLG00005000546	KIZ (ENSSVLG00005000513) #24	XRN2 (ENSSVLG00005000470) #25	NKX2-4 (ENSSVLG00005000455) #26	NKX2-2 (ENSSVLG00005000441) #27	PAX1 (ENSSVLG00005000421) #28	ENSSVLG00005000403	FOXA2 (ENSSVLG00005000389) #29	ENSSVLG00005000368	SSTR4 (ENSSVLG00005000359) #30	THBD (ENSSVLG00005000349) #31	CD93 (ENSSVLG00005000330) #32	ENSSVLG00005000317 #33	ENSSVLG00005000304 #33
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Degu	MODERN SPECIES	114	PET117 (ENSODEG00000011978)	ENSODEG00000012384	KAT14 (ENSODEG00000013036) #7	DZANK1 (ENSODEG00000011655) #10	POLR3F (ENSODEG00000011521) #11	RBBP9 (ENSODEG00000011960) #12	SEC23B (ENSODEG00000011313) #13	DTD1 (ENSODEG00000012785) #14	SLC24A3 (ENSODEG00000012016) #16	RIN2 (ENSODEG00000012000) #18	NAA20 (ENSODEG00000011704) #19	CRNKL1 (ENSODEG00000012175) #20	ENSODEG00000012675 #21	ENSODEG00000012124 #21	ENSODEG00000011346	INSM1 (ENSODEG00000020028) #22	RALGAPA2 (ENSODEG00000011023) #23	KIZ (ENSODEG00000011491) #24	ENSODEG00000011188	ENSODEG00000010745 #25	NKX2-4 (ENSODEG00000010842) #26	ENSODEG00000012687	NKX2-2 (ENSODEG00000012371) #27	ENSODEG00000019885	ENSODEG00000019878	PAX1 (ENSODEG00000012427) #28	FOXA2 (ENSODEG00000011162) #29	THBD (ENSODEG00000010709) #31	CD93 (ENSODEG00000012518) #32	NXT1 (ENSODEG00000019900) #33	GZF1 (ENSODEG00000013020) #34
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Mouse	MODERN SPECIES	11	Ovol2 (ENSMUSG00000037279)	Kat14 (ENSMUSG00000027425) #7	Pet117 (ENSMUSG00000098387)	Dzank1 (ENSMUSG00000037259) #10	Polr3f (ENSMUSG00000027427) #11	Rbbp9 (ENSMUSG00000027428) #12	Sec23b (ENSMUSG00000027429) #13	Smim26 (ENSMUSG00000074754)	Dtd1 (ENSMUSG00000027430) #14	Scp2d1 (ENSMUSG00000027431) #15	Slc24a3 (ENSMUSG00000063873) #16	Rin2 (ENSMUSG00000001768) #18	Naa20 (ENSMUSG00000002728) #19	Crnkl1 (ENSMUSG00000001767) #20	Cfap61 (ENSMUSG00000037143) #21	Insm1 (ENSMUSG00000068154) #22	Ralgapa2 (ENSMUSG00000037110) #23	Kiz (ENSMUSG00000074749) #24	Xrn2 (ENSMUSG00000027433) #25	Nkx2-4 (ENSMUSG00000054160) #26	Nkx2-2 (ENSMUSG00000027434) #27	Pax1 (ENSMUSG00000037034) #28	Foxa2 (ENSMUSG00000037025) #29	Sstr4 (ENSMUSG00000037014) #30	Thbd (ENSMUSG00000074743) #31	Cd93 (ENSMUSG00000027435) #32	Nxt1 (ENSMUSG00000036992) #33	Gzf1 (ENSMUSG00000027439) #34	Napb (ENSMUSG00000027438) #35	Cstl1 (ENSMUSG00000055177) #36	Cst11 (ENSMUSG00000036958) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
spretus	MODERN SPECIES	11	Mgme1 (MGP_SPRETEiJ_G0025299)	Ovol2 (MGP_SPRETEiJ_G0025300)	Kat14 (MGP_SPRETEiJ_G0025301) #7	Pet117 (MGP_SPRETEiJ_G0025302)	Dzank1 (MGP_SPRETEiJ_G0025303) #10	Polr3f (MGP_SPRETEiJ_G0025304) #11	Rbbp9 (MGP_SPRETEiJ_G0025305) #12	Sec23b (MGP_SPRETEiJ_G0025306) #13	Smim26 (MGP_SPRETEiJ_G0025307)	Dtd1 (MGP_SPRETEiJ_G0025308) #14	Slc24a3 (MGP_SPRETEiJ_G0025309) #16	Rin2 (MGP_SPRETEiJ_G0025310) #18	Naa20 (MGP_SPRETEiJ_G0025311) #19	Crnkl1 (MGP_SPRETEiJ_G0025312) #20	Cfap61 (MGP_SPRETEiJ_G0025313) #21	Insm1 (MGP_SPRETEiJ_G0025314) #22	Ralgapa2 (MGP_SPRETEiJ_G0025315) #23	Kiz (MGP_SPRETEiJ_G0025316) #24	MGP_SPRETEiJ_G0025317	Xrn2 (MGP_SPRETEiJ_G0025318) #25	Nkx2-4 (MGP_SPRETEiJ_G0025319) #26	Nkx2-2 (MGP_SPRETEiJ_G0025320) #27	Pax1 (MGP_SPRETEiJ_G0025321) #28	Foxa2 (MGP_SPRETEiJ_G0025322) #29	Sstr4 (MGP_SPRETEiJ_G0025323) #30	Thbd (MGP_SPRETEiJ_G0025324) #31	Cd93 (MGP_SPRETEiJ_G0025325) #32	Nxt1 (MGP_SPRETEiJ_G0025326) #33	Gzf1 (MGP_SPRETEiJ_G0025327) #34	Napb (MGP_SPRETEiJ_G0025328) #35	Cstl1 (MGP_SPRETEiJ_G0025329) #36
Steppe mouse	MODERN SPECIES	17									ENSMSIG00000013826	Slc24a3 (ENSMSIG00000013851) #16	ENSMSIG00000014037	Rin2 (ENSMSIG00000014047) #18	Naa20 (ENSMSIG00000014125) #19	Crnkl1 (ENSMSIG00000014156) #20	Cfap61 (ENSMSIG00000014190) #21	ENSMSIG00000014314 #22	Ralgapa2 (ENSMSIG00000014327) #23	Kiz (ENSMSIG00000014848) #24	Xrn2 (ENSMSIG00000014908) #25	Nkx2-4 (ENSMSIG00000015047) #26	ENSMSIG00000015060 #27	ENSMSIG00000015077	Pax1 (ENSMSIG00000015104) #28
Ryukyu mouse	MODERN SPECIES	11	Ovol2 (MGP_CAROLIEiJ_G0024381)	Kat14 (MGP_CAROLIEiJ_G0024382) #7	Pet117 (MGP_CAROLIEiJ_G0024383)	Dzank1 (MGP_CAROLIEiJ_G0024384) #10	Polr3f (MGP_CAROLIEiJ_G0024385) #11	Rbbp9 (MGP_CAROLIEiJ_G0024386) #12	Sec23b (MGP_CAROLIEiJ_G0024387) #13	Smim26 (MGP_CAROLIEiJ_G0024388)	Dtd1 (MGP_CAROLIEiJ_G0024389) #14	Scp2d1 (MGP_CAROLIEiJ_G0024390) #15	MGP_CAROLIEiJ_G0024391 #16	Rin2 (MGP_CAROLIEiJ_G0024392) #18	Naa20 (MGP_CAROLIEiJ_G0024393) #19	Crnkl1 (MGP_CAROLIEiJ_G0024394) #20	Cfap61 (MGP_CAROLIEiJ_G0024395) #21	Insm1 (MGP_CAROLIEiJ_G0024396) #22	Ralgapa2 (MGP_CAROLIEiJ_G0024397) #23	Kiz (MGP_CAROLIEiJ_G0024398) #24	MGP_CAROLIEiJ_G0024399	Xrn2 (MGP_CAROLIEiJ_G0024400) #25	Nkx2-4 (MGP_CAROLIEiJ_G0024401) #26	Nkx2-2 (MGP_CAROLIEiJ_G0024402) #27	Pax1 (MGP_CAROLIEiJ_G0024403) #28	Foxa2 (MGP_CAROLIEiJ_G0024404) #29	Sstr4 (MGP_CAROLIEiJ_G0024405) #30	Thbd (MGP_CAROLIEiJ_G0024406) #31	Cd93 (MGP_CAROLIEiJ_G0024407) #32	Nxt1 (MGP_CAROLIEiJ_G0024408) #33	Gzf1 (MGP_CAROLIEiJ_G0024409) #34	Napb (MGP_CAROLIEiJ_G0024410) #35	Cstl1 (MGP_CAROLIEiJ_G0024411) #36
Shrew mouse	MODERN SPECIES	16	Ovol2 (MGP_PahariEiJ_G0025825)	Kat14 (MGP_PahariEiJ_G0025826) #7	Pet117 (MGP_PahariEiJ_G0025827)	Dzank1 (MGP_PahariEiJ_G0025828) #10	Polr3f (MGP_PahariEiJ_G0025829) #11	Rbbp9 (MGP_PahariEiJ_G0025830) #12	Sec23b (MGP_PahariEiJ_G0025831) #13	Smim26 (MGP_PahariEiJ_G0025832)	Dtd1 (MGP_PahariEiJ_G0025833) #14	Scp2d1 (MGP_PahariEiJ_G0025834) #15	MGP_PahariEiJ_G0025835 #16	Rin2 (MGP_PahariEiJ_G0025836) #18	Naa20 (MGP_PahariEiJ_G0025837) #19	Crnkl1 (MGP_PahariEiJ_G0025838) #20	Cfap61 (MGP_PahariEiJ_G0025839) #21	Insm1 (MGP_PahariEiJ_G0025840) #22	Ralgapa2 (MGP_PahariEiJ_G0025841) #23	Kiz (MGP_PahariEiJ_G0025842) #24	Xrn2 (MGP_PahariEiJ_G0025843) #25	Nkx2-4 (MGP_PahariEiJ_G0025844) #26	Nkx2-2 (MGP_PahariEiJ_G0025845) #27	Pax1 (MGP_PahariEiJ_G0025846) #28	Foxa2 (MGP_PahariEiJ_G0025847) #29	Sstr4 (MGP_PahariEiJ_G0025848) #30	Thbd (MGP_PahariEiJ_G0025849) #31	Cd93 (MGP_PahariEiJ_G0025850) #32	Nxt1 (MGP_PahariEiJ_G0025851) #33	Gzf1 (MGP_PahariEiJ_G0025852) #34	Napb (MGP_PahariEiJ_G0025853) #35	Cstl1 (MGP_PahariEiJ_G0025854) #36	Cst11 (MGP_PahariEiJ_G0025855) #37
Rat	MODERN SPECIES	13	Ovol2 (ENSRNOG00000006850)	Kat14 (ENSRNOG00000007160) #7	Zfp133 (ENSRNOG00000027955) #8	Dzank1 (ENSRNOG00000007440) #10	Polr3f (ENSRNOG00000007548) #11	Rbbp9 (ENSRNOG00000007972) #12	Sec23b (ENSRNOG00000008411) #13	Smim26 (ENSRNOG00000036971)	Dtd1 (ENSRNOG00000008746) #14	Scp2d1 (ENSRNOG00000009461) #15	Slc24a3 (ENSRNOG00000060687) #16	Rin2 (ENSRNOG00000010131) #18	Naa20 (ENSRNOG00000010523) #19	Crnkl1 (ENSRNOG00000010587) #20	AABR07054096.1 (ENSRNOG00000011028) #21	Insm1 (ENSRNOG00000068937) #22	Ralgapa2 (ENSRNOG00000036964) #23	ENSRNOG00000070752	Kiz (ENSRNOG00000025141) #24	Xrn2 (ENSRNOG00000011785) #25	Nkx2-4 (ENSRNOG00000012647) #26	Nkx2-2 (ENSRNOG00000012728) #27	Pax1 (ENSRNOG00000024882) #28	Foxa2 (ENSRNOG00000013133) #29	Sstr4 (ENSRNOG00000004641) #30	Thbd (ENSRNOG00000004687) #31	Cd93 (ENSRNOG00000024799) #32	Nxt1 (ENSRNOG00000004700) #33	Gzf1 (ENSRNOG00000004735) #34	Napb (ENSRNOG00000004753) #35	Cstl1 (ENSRNOG00000004779) #36
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Golden Hamster	MODERN SPECIES	650		ENSMAUG00000002240 #10	Polr3f (ENSMAUG00000020176) #11	Rbbp9 (ENSMAUG00000009061) #12	ENSMAUG00000009451 #13	Smim26 (ENSMAUG00000021093)	Dtd1 (ENSMAUG00000021240) #14	Scp2d1 (ENSMAUG00000008663) #15	Slc24a3 (ENSMAUG00000014182) #16	Rin2 (ENSMAUG00000010319) #18	Naa20 (ENSMAUG00000016403) #19	Crnkl1 (ENSMAUG00000020764) #20	ENSMAUG00000014865	ENSMAUG00000018263	Cfap61 (ENSMAUG00000021388) #21	Insm1 (ENSMAUG00000008643) #22	Ralgapa2 (ENSMAUG00000000917) #23	Kiz (ENSMAUG00000012933) #24	Xrn2 (ENSMAUG00000021842) #25	Nkx2-4 (ENSMAUG00000013928) #26	Nkx2-2 (ENSMAUG00000004347) #27	Pax1 (ENSMAUG00000019674) #28	Foxa2 (ENSMAUG00000016457) #29	Sstr4 (ENSMAUG00000008430) #30	Cd93 (ENSMAUG00000019441) #32	Nxt1 (ENSMAUG00000004141) #33	Gzf1 (ENSMAUG00000019656) #34	Napb (ENSMAUG00000018004) #35	Cst12 (ENSMAUG00000010970)	Cst13 (ENSMAUG00000021851)	Cst9 (ENSMAUG00000012174)
Chinese hamster chok1gshd	MODERN SPECIES	188	Snx5 (ENSCGRG00001013269)	MGME1 (ENSCGRG00001019490)	Ovol2 (ENSCGRG00001018332)	Pet117 (ENSCGRG00001015197)	Kat14 (ENSCGRG00001013086) #7	ENSCGRG00001012031 #8	Dzank1 (ENSCGRG00001019385) #10	Polr3f (ENSCGRG00001002032) #11	Rbbp9 (ENSCGRG00001022430) #12	Sec23b (ENSCGRG00001020368) #13	Smim26 (ENSCGRG00001010844)	Dtd1 (ENSCGRG00001008221) #14	Scp2d1 (ENSCGRG00001008412) #15	Slc24a3 (ENSCGRG00001004364) #16	Cfap61 (ENSCGRG00001022702) #21	Insm1 (ENSCGRG00001011430) #22	Ralgapa2 (ENSCGRG00001024249) #23	Kiz (ENSCGRG00001020800) #24	Xrn2 (ENSCGRG00001010676) #25	Nkx2-4 (ENSCGRG00001002742) #26	ENSCGRG00001016394	Nkx2-2 (ENSCGRG00001013924) #27	Pax1 (ENSCGRG00001009223) #28	Foxa2 (ENSCGRG00001000494) #29	Sstr4 (ENSCGRG00001010896) #30	Thbd (ENSCGRG00001010215) #31	Cd93 (ENSCGRG00001016628) #32	ENSCGRG00001007062 #33	Gzf1 (ENSCGRG00001003944) #34	Napb (ENSCGRG00001015884) #35	Cstl1 (ENSCGRG00001006313) #36
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Northern American deer mouse	MODERN SPECIES	17	ENSPEMG00000012956	ENSPEMG00000019835 #8	Dzank1 (ENSPEMG00000019969) #10	Polr3f (ENSPEMG00000006966) #11	Rbbp9 (ENSPEMG00000027962) #12	Sec23b (ENSPEMG00000019699) #13	Smim26 (ENSPEMG00000025969)	Dtd1 (ENSPEMG00000019439) #14	Scp2d1 (ENSPEMG00000012681) #15	ENSPEMG00000027872	Slc24a3 (ENSPEMG00000019985) #16	Rin2 (ENSPEMG00000007218) #18	Naa20 (ENSPEMG00000019944) #19	Crnkl1 (ENSPEMG00000000073) #20	Cfap61 (ENSPEMG00000019999) #21	Insm1 (ENSPEMG00000011704) #22	Ralgapa2 (ENSPEMG00000015207) #23	ENSPEMG00000018301	Kiz (ENSPEMG00000019926) #24	Xrn2 (ENSPEMG00000000111) #25	Nkx2-2 (ENSPEMG00000031205) #27	Pax1 (ENSPEMG00000013032) #28	ENSPEMG00000013352	Foxa2 (ENSPEMG00000018383) #29	Sstr4 (ENSPEMG00000013404) #30	Thbd (ENSPEMG00000013258) #31	Cd93 (ENSPEMG00000009909) #32	Nxt1 (ENSPEMG00000010397) #33	Gzf1 (ENSPEMG00000011285) #34	Napb (ENSPEMG00000014658) #35	Cstl1 (ENSPEMG00000015396) #36
Prairie vole	MODERN SPECIES	86	Pet117 (ENSMOCG00000015322)	Kat14 (ENSMOCG00000013699) #7	ENSMOCG00000009849 #8	Dzank1 (ENSMOCG00000011252) #10	Polr3f (ENSMOCG00000018352) #11	Rbbp9 (ENSMOCG00000014462) #12	Sec23b (ENSMOCG00000003908) #13	ENSMOCG00000016611	Dtd1 (ENSMOCG00000001062) #14	Scp2d1 (ENSMOCG00000005227) #15	Slc24a3 (ENSMOCG00000014059) #16	Rin2 (ENSMOCG00000011014) #18	ENSMOCG00000021892 #19	ENSMOCG00000000681 #20	Cfap61 (ENSMOCG00000001829) #21	Insm1 (ENSMOCG00000010418) #22	Ralgapa2 (ENSMOCG00000015663) #23	ENSMOCG00000020632	Kiz (ENSMOCG00000022509) #24	Xrn2 (ENSMOCG00000012588) #25	Nkx2-4 (ENSMOCG00000012451) #26	Nkx2-2 (ENSMOCG00000016851) #27	Pax1 (ENSMOCG00000000474) #28	Foxa2 (ENSMOCG00000017025) #29	Sstr4 (ENSMOCG00000004743) #30	Thbd (ENSMOCG00000004558) #31	Cd93 (ENSMOCG00000008988) #32	ENSMOCG00000014565	Nxt1 (ENSMOCG00000018712) #33	Gzf1 (ENSMOCG00000017816) #34	Napb (ENSMOCG00000000502) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	450											Slc24a3 (ENSNGAG00000011154) #16	Rin2 (ENSNGAG00000009777) #18	Naa20 (ENSNGAG00000014784) #19	Crnkl1 (ENSNGAG00000023097) #20	Cfap61 (ENSNGAG00000020907) #21	Insm1 (ENSNGAG00000020652) #22	ENSNGAG00000011107 #23	ENSNGAG00000015751 #23	Kiz (ENSNGAG00000013505) #24	Xrn2 (ENSNGAG00000018138) #25	Nkx2-4 (ENSNGAG00000009374) #26	Nkx2-2 (ENSNGAG00000015181) #27	Pax1 (ENSNGAG00000011690) #28
Lesser Egyptian jerboa	MODERN SPECIES	159	ENSJJAG00000014561	Mgme1 (ENSJJAG00000014663)	Ovol2 (ENSJJAG00000014942)	Kat14 (ENSJJAG00000015569) #7	ENSJJAG00000015853	Dzank1 (ENSJJAG00000016670) #10	Polr3f (ENSJJAG00000017513) #11	Rbbp9 (ENSJJAG00000017816) #12	Sec23b (ENSJJAG00000018722) #13	Dtd1 (ENSJJAG00000014379) #14	Slc24a3 (ENSJJAG00000015385) #16	ENSJJAG00000015745 #18	Naa20 (ENSJJAG00000016004) #19	Crnkl1 (ENSJJAG00000016926) #20	Cfap61 (ENSJJAG00000018922) #21	Insm1 (ENSJJAG00000020276) #22	ENSJJAG00000020467 #23	ENSJJAG00000020710 #23	ENSJJAG00000020834	Kiz (ENSJJAG00000021546) #24	Xrn2 (ENSJJAG00000022128) #25	Nkx2-4 (ENSJJAG00000022335) #26	Nkx2-2 (ENSJJAG00000022426) #27	Pax1 (ENSJJAG00000023177) #28	Foxa2 (ENSJJAG00000023228) #29	Sstr4 (ENSJJAG00000023336) #30	Cd93 (ENSJJAG00000007591) #32	ENSJJAG00000012022 #33	Gzf1 (ENSJJAG00000008172) #34	Napb (ENSJJAG00000010872) #35	Cstl1 (ENSJJAG00000011653) #36
Kangaroo rat	MODERN SPECIES	418	Pet117 (ENSDORG00000027184)	Kat14 (ENSDORG00000013195) #7	ENSDORG00000009747 #8	Dzank1 (ENSDORG00000016349) #10	Polr3f (ENSDORG00000016352) #11	Sec23b (ENSDORG00000014203) #13	Dtd1 (ENSDORG00000006940) #14	Scp2d1 (ENSDORG00000002960) #15	Slc24a3 (ENSDORG00000008187) #16	Rin2 (ENSDORG00000000392) #18	Naa20 (ENSDORG00000028339) #19	ENSDORG00000000394 #20	ENSDORG00000024717 #21	ENSDORG00000029623 #21	ENSDORG00000000395	Insm1 (ENSDORG00000009864) #22	ENSDORG00000025962 #23	ENSDORG00000024554 #23	Xrn2 (ENSDORG00000005434) #25	Nkx2-4 (ENSDORG00000023542) #26	Nkx2-2 (ENSDORG00000007972) #27	Pax1 (ENSDORG00000016051) #28	Foxa2 (ENSDORG00000027269) #29	Sstr4 (ENSDORG00000010486) #30	Cd93 (ENSDORG00000028704) #32	Nxt1 (ENSDORG00000024690) #33	Gzf1 (ENSDORG00000011855) #34	Napb (ENSDORG00000011856) #35	Cst12 (ENSDORG00000023744)	Cst8 (ENSDORG00000011859)	Cst13 (ENSDORG00000027228)