Amniota	ANCESTRAL SPECIES	12	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00440000033970	ENSGT00390000014969
Mammalia	ANCESTRAL SPECIES	22	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000154755	ENSGT00950000183147.B	ENSGT00940000160277
Theria	ANCESTRAL SPECIES	13	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000163249	ENSGT00940000154755	ENSGT00950000183147.B
Eutheria	ANCESTRAL SPECIES	11	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Primates	ANCESTRAL SPECIES	17	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00940000164207.g.b	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000014861.c ##12	ENSGT00940000164207.g.b	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00550000074823.a.i.b	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Macaca	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.d #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b.g.a #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.b.b.a.a.b.a.a.a #17	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35
Rhesus	MODERN SPECIES	1	KAT14 (ENSMMUG00000023140) #7	ZNF133 (ENSMMUG00000014453) #8	ENSMMUG00000044359 #9	DZANK1 (ENSMMUG00000004139) #10	POLR3F (ENSMMUG00000004143) #11	RBBP9 (ENSMMUG00000004146) #12	SEC23B (ENSMMUG00000012878) #13	DTD1 (ENSMMUG00000012880) #14	SCP2D1 (ENSMMUG00000050690) #15	SLC24A3 (ENSMMUG00000002321) #16	ENSMMUG00000051129 #17	RIN2 (ENSMMUG00000010114) #18	NAA20 (ENSMMUG00000007708) #19	CRNKL1 (ENSMMUG00000007709) #20	CFAP61 (ENSMMUG00000042668) #21	INSM1 (ENSMMUG00000039294) #22	RALGAPA2 (ENSMMUG00000018371) #23	KIZ (ENSMMUG00000002060) #24	XRN2 (ENSMMUG00000011405) #25	NKX2-4 (ENSMMUG00000011409) #26	ENSMMUG00000056728 #27	PAX1 (ENSMMUG00000019409) #28	FOXA2 (ENSMMUG00000010410) #29	SSTR4 (ENSMMUG00000016815) #30	THBD (ENSMMUG00000016814) #31	CD93 (ENSMMUG00000016813) #32	NXT1 (ENSMMUG00000022386) #33	GZF1 (ENSMMUG00000022387) #34	NAPB (ENSMMUG00000022388) #35	CSTL1 (ENSMMUG00000055975) #36	CST11 (ENSMMUG00000022393) #37
Pig-tailed macaque	MODERN SPECIES	130	KAT14 (ENSMNEG00000032919) #7	ZNF133 (ENSMNEG00000042900) #8	ENSMNEG00000038877 #9	DZANK1 (ENSMNEG00000039315) #10	POLR3F (ENSMNEG00000033404) #11	ENSMNEG00000031436 #12	ENSMNEG00000028082	SEC23B (ENSMNEG00000030931) #13	ENSMNEG00000040178 ##14	ENSMNEG00000043133	SLC24A3 (ENSMNEG00000029022) #16	RIN2 (ENSMNEG00000005068) #18	NAA20 (ENSMNEG00000033202) #19	CRNKL1 (ENSMNEG00000037490) #20	CFAP61 (ENSMNEG00000036910) #21	INSM1 (ENSMNEG00000029140) #22	RALGAPA2 (ENSMNEG00000033398) #23	ENSMNEG00000039122	KIZ (ENSMNEG00000028617) #24	XRN2 (ENSMNEG00000040626) #25	NKX2-4 (ENSMNEG00000028280) #26	NKX2-2 (ENSMNEG00000045238) #27	PAX1 (ENSMNEG00000040896) #28	ENSMNEG00000028347	FOXA2 (ENSMNEG00000011763) #29	SSTR4 (ENSMNEG00000038323) #30	CD93 (ENSMNEG00000042460) #32	ENSMNEG00000024687	NXT1 (ENSMNEG00000027745) #33	GZF1 (ENSMNEG00000033117) #34	NAPB (ENSMNEG00000036841) #35
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00940000154327.b.e.b #15	ENSGT00550000074823.a.i.b	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.c ##12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00940000153431.b.h ##14	ENSGT00550000074823.a.i.b	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00950000183105.A.m.b	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000156996 #32	ENSGT00950000183087.A.a.b.b.g.e.b.a.b	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35
Sooty mangabey	MODERN SPECIES	602	KAT14 (ENSCATG00000044790) #7	ZNF133 (ENSCATG00000044755) #8	ENSCATG00000040967 #9	DZANK1 (ENSCATG00000040828) #10	POLR3F (ENSCATG00000019507) #11	ENSCATG00000035522 ##12	ENSCATG00000003757	SEC23B (ENSCATG00000026216) #13	DTD1 (ENSCATG00000039340) ##14	ENSCATG00000037045	SLC24A3 (ENSCATG00000034515) #16	RIN2 (ENSCATG00000042503) #18	NAA20 (ENSCATG00000027935) #19	CRNKL1 (ENSCATG00000034247) #20	CFAP61 (ENSCATG00000043610) #21	INSM1 (ENSCATG00000037816) #22	RALGAPA2 (ENSCATG00000035357) #23	ENSCATG00000043761	KIZ (ENSCATG00000042535) #24	XRN2 (ENSCATG00000040350) #25	NKX2-4 (ENSCATG00000023019) #26	NKX2-2 (ENSCATG00000041599) #27	PAX1 (ENSCATG00000029185) #28	ENSCATG00000022190	FOXA2 (ENSCATG00000033454) #29	SSTR4 (ENSCATG00000019242) #30	CD93 (ENSCATG00000009216) #32	ENSCATG00000019258	NXT1 (ENSCATG00000019026) #33	GZF1 (ENSCATG00000039279) #34	NAPB (ENSCATG00000042262) #35
Vervet Monkey	MODERN SPECIES	11	KAT14 (ENSCSAG00000011539) #7	ENSCSAG00000018673	ZNF133 (ENSCSAG00000011532) #8	DZANK1 (ENSCSAG00000011523) #10	POLR3F (ENSCSAG00000011513) #11	RBBP9 (ENSCSAG00000011497) ##12	SEC23B (ENSCSAG00000011476) #13	DTD1 (ENSCSAG00000011466) ##14	SCP2D1 (ENSCSAG00000018674) #15	SLC24A3 (ENSCSAG00000011456) #16	ENSCSAG00000011450	RIN2 (ENSCSAG00000011446) #18	NAA20 (ENSCSAG00000011440) #19	CRNKL1 (ENSCSAG00000011434) #20	CFAP61 (ENSCSAG00000011382) #21	INSM1 (ENSCSAG00000018675) #22	RALGAPA2 (ENSCSAG00000011248) #23	KIZ (ENSCSAG00000011135) #24	XRN2 (ENSCSAG00000011094) #25	NKX2-4 (ENSCSAG00000011080) #26	NKX2-2 (ENSCSAG00000011072) #27	PAX1 (ENSCSAG00000011068) #28	FOXA2 (ENSCSAG00000011062) #29	SSTR4 (ENSCSAG00000018676) #30	THBD (ENSCSAG00000018677) #31	CD93 (ENSCSAG00000011058) #32	NXT1 (ENSCSAG00000018678) #33	GZF1 (ENSCSAG00000011054) #34	ENSCSAG00000011037	ENSCSAG00000011032	CST3 (ENSCSAG00000011027)
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00940000162260 #8	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Orangutan	MODERN SPECIES	11	OVOL2 (ENSPPYG00000010732)	KAT14 (ENSPPYG00000010733) #7	ZNF133 (ENSPPYG00000010734) #8	DZANK1 (ENSPPYG00000010736) #10	POLR3F (ENSPPYG00000010737) #11	RBBP9 (ENSPPYG00000036673) #12	SEC23B (ENSPPYG00000010739) #13	SMIM26 (ENSPPYG00000033260)	ENSPPYG00000010740 #14	SCP2D1 (ENSPPYG00000010741) #15	SLC24A3 (ENSPPYG00000010743) #16	RIN2 (ENSPPYG00000010745) #18	NAA20 (ENSPPYG00000010746) #19	CRNKL1 (ENSPPYG00000010747) #20	CFAP61 (ENSPPYG00000010748) #21	INSM1 (ENSPPYG00000010750) #22	RALGAPA2 (ENSPPYG00000010751) #23	KIZ (ENSPPYG00000010754) #24	XRN2 (ENSPPYG00000010755) #25	NKX2-4 (ENSPPYG00000010756) #26	NKX2-2 (ENSPPYG00000010757) #27	PAX1 (ENSPPYG00000010758) #28	FOXA2 (ENSPPYG00000040463) #29	SSTR4 (ENSPPYG00000010761) #30	THBD (ENSPPYG00000010762) #31	CD93 (ENSPPYG00000010763) #32	ENSPPYG00000010764	NXT1 (ENSPPYG00000010765) #33	GZF1 (ENSPPYG00000010766) #34	NAPB (ENSPPYG00000010767) #35	CSTL1 (ENSPPYG00000010768) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n.m.a	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00910000147760	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00910000148254	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00910000146844.a.b	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041.g #33
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00860000136156 #9	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000013102.e.a.n.m.a	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00910000147760	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00910000148254	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00910000146941	ENSGT00910000146844.a.b	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00910000147439	ENSGT00940000162041.g #33
Human	MODERN SPECIES	12	PET117 (ENSG00000232838)	ZNF133 (ENSG00000125846) #8	DZANK1 (ENSG00000089091) #10	POLR3F (ENSG00000132664) #11	RBBP9 (ENSG00000089050) #12	SEC23B (ENSG00000101310) #13	SMIM26 (ENSG00000232388)	ENSG00000284776	DTD1 (ENSG00000125821) #14	SCP2D1 (ENSG00000132631) #15	SLC24A3 (ENSG00000185052) #16	RIN2 (ENSG00000132669) #18	NAA20 (ENSG00000173418) #19	CRNKL1 (ENSG00000101343) #20	CFAP61 (ENSG00000089101) #21	INSM1 (ENSG00000173404) #22	RALGAPA2 (ENSG00000188559) #23	KIZ (ENSG00000088970) #24	XRN2 (ENSG00000088930) #25	NKX2-4 (ENSG00000125816) #26	NKX2-2 (ENSG00000125820) #27	PAX1 (ENSG00000125813) #28	FOXA2 (ENSG00000125798) #29	SSTR4 (ENSG00000132671) #30	THBD (ENSG00000178726) #31	CD93 (ENSG00000125810) #32	NXT1 (ENSG00000132661) #33	GZF1 (ENSG00000125812) #34	NAPB (ENSG00000125814) #35	CSTL1 (ENSG00000125823) #36	CST11 (ENSG00000125831) #37
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cebidae	ANCESTRAL SPECIES	13	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000081177	PET117 (ENSCJAG00000040178)	KAT14 (ENSCJAG00000005057) #7	ZNF133 (ENSCJAG00000005089) #8	DZANK1 (ENSCJAG00000005123) #10	POLR3F (ENSCJAG00000005159) #11	RBBP9 (ENSCJAG00000005170) #12	SEC23B (ENSCJAG00000005179) #13	ENSCJAG00000086632	DTD1 (ENSCJAG00000005306) #14	SLC24A3 (ENSCJAG00000005325) #16	RIN2 (ENSCJAG00000005342) #18	ENSCJAG00000005377 #19	CRNKL1 (ENSCJAG00000005393) #20	CFAP61 (ENSCJAG00000005444) #21	INSM1 (ENSCJAG00000040556) #22	RALGAPA2 (ENSCJAG00000005471) #23	KIZ (ENSCJAG00000005568) #24	XRN2 (ENSCJAG00000005611) #25	NKX2-4 (ENSCJAG00000040336) #26	ENSCJAG00000081459	ENSCJAG00000051781 #27	ENSCJAG00000076879	ENSCJAG00000070559	PAX1 (ENSCJAG00000005773) #28	ENSCJAG00000075555	ENSCJAG00000070048	FOXA2 (ENSCJAG00000005785) #29	THBD (ENSCJAG00000005795) #31	CD93 (ENSCJAG00000005796) #32	NXT1 (ENSCJAG00000044836) #33
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861.a #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Capuchin	MODERN SPECIES	134													NAA20 (ENSCCAG00000028274) #19	CRNKL1 (ENSCCAG00000027037) #20	CFAP61 (ENSCCAG00000026777) #21	INSM1 (ENSCCAG00000023181) #22	RALGAPA2 (ENSCCAG00000028362) #23	KIZ (ENSCCAG00000031682) #24	ENSCCAG00000036857 #25	NKX2-4 (ENSCCAG00000032197) #26	NKX2-2 (ENSCCAG00000035862) #27	PAX1 (ENSCCAG00000025569) #28	FOXA2 (ENSCCAG00000027576) #29	SSTR4 (ENSCCAG00000019059) #30	THBD (ENSCCAG00000020711) #31	CD93 (ENSCCAG00000034013) #32	NXT1 (ENSCCAG00000015478) #33	GZF1 (ENSCCAG00000035601) #34	NAPB (ENSCCAG00000029344) #35	CSTL1 (ENSCCAG00000033212) #36	CST11 (ENSCCAG00000035766) #37
Mas night monkey	MODERN SPECIES	720									SLC24A3 (ENSANAG00000022086) #16	RIN2 (ENSANAG00000033313) #18	ENSANAG00000021111 #19	CRNKL1 (ENSANAG00000024889) #20	ENSANAG00000023984	ENSANAG00000033104 #21	ENSANAG00000026688 #21	INSM1 (ENSANAG00000021754) #22	ENSANAG00000025204	RALGAPA2 (ENSANAG00000035297) #23	KIZ (ENSANAG00000030324) #24	XRN2 (ENSANAG00000020126) #25	NKX2-4 (ENSANAG00000025954) #26	NKX2-2 (ENSANAG00000031496) #27	PAX1 (ENSANAG00000031911) #28	FOXA2 (ENSANAG00000000151) #29	SSTR4 (ENSANAG00000031033) #30	CD93 (ENSANAG00000031974) #32
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.b #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mouse lemur	MODERN SPECIES	9	ENSMICG00000014350	OVOL2 (ENSMICG00000032455)	KAT14 (ENSMICG00000014378) #7	ZNF133 (ENSMICG00000010713) #8	DZANK1 (ENSMICG00000010726) #10	POLR3F (ENSMICG00000044519) #11	RBBP9 (ENSMICG00000047808) #12	ENSMICG00000042283 #13	ENSMICG00000010750 #13	DTD1 (ENSMICG00000010771) #14	SLC24A3 (ENSMICG00000006014) #16	RIN2 (ENSMICG00000006035) #18	ENSMICG00000006044 #19	CRNKL1 (ENSMICG00000006048) #20	CFAP61 (ENSMICG00000006057) #21	INSM1 (ENSMICG00000037992) #22	RALGAPA2 (ENSMICG00000006077) #23	KIZ (ENSMICG00000008114) #24	XRN2 (ENSMICG00000008126) #25	NKX2-4 (ENSMICG00000032695) #26	NKX2-2 (ENSMICG00000045009) #27	PAX1 (ENSMICG00000016968) #28	FOXA2 (ENSMICG00000030588) #29	CD93 (ENSMICG00000017898) #32	NXT1 (ENSMICG00000044853) #33	GZF1 (ENSMICG00000046070) #34	NAPB (ENSMICG00000017902) #35	CSTL1 (ENSMICG00000017903) #36	CST11 (ENSMICG00000017904) #37	CST8 (ENSMICG00000017905)	CST9 (ENSMICG00000047052)
Lemuriformes_a	ANCESTRAL SPECIES	137				ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.b #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Coquerels sifaka	MODERN SPECIES	693				ZNF133 (ENSPCOG00000015139) #8	DZANK1 (ENSPCOG00000022697) #10	POLR3F (ENSPCOG00000004543) #11	RBBP9 (ENSPCOG00000007470) #12	ENSPCOG00000022506 #13	SMIM26 (ENSPCOG00000010457)	DTD1 (ENSPCOG00000028695) #14	SLC24A3 (ENSPCOG00000012072) #16	RIN2 (ENSPCOG00000022892) #18	NAA20 (ENSPCOG00000014450) #19	CRNKL1 (ENSPCOG00000017608) #20	CFAP61 (ENSPCOG00000025735) #21	INSM1 (ENSPCOG00000013399) #22	RALGAPA2 (ENSPCOG00000016336) #23	KIZ (ENSPCOG00000007399) #24	XRN2 (ENSPCOG00000016468) #25	NKX2-4 (ENSPCOG00000023067) #26
Greater bamboo lemur	MODERN SPECIES	878																INSM1 (ENSPSMG00000008427) #22	RALGAPA2 (ENSPSMG00000008474) #23	ENSPSMG00000008491	KIZ (ENSPSMG00000008514) #24	XRN2 (ENSPSMG00000008572) #25	NKX2-4 (ENSPSMG00000008590) #26	NKX2-2 (ENSPSMG00000008596) #27	PAX1 (ENSPSMG00000008610) #28	FOXA2 (ENSPSMG00000008622) #29	SSTR4 (ENSPSMG00000008634) #30	THBD (ENSPSMG00000008649) #31	CD93 (ENSPSMG00000008660) #32	NXT1 (ENSPSMG00000008668) #33	GZF1 (ENSPSMG00000008681) #34	NAPB (ENSPSMG00000008819) #35	CSTL1 (ENSPSMG00000008917) #36
Bushbaby	MODERN SPECIES	251		ENSOGAG00000002908 #8	DZANK1 (ENSOGAG00000002912) #10	POLR3F (ENSOGAG00000002916) #11	RBBP9 (ENSOGAG00000002919) #12	SEC23B (ENSOGAG00000004546) #13	ENSOGAG00000031912	DTD1 (ENSOGAG00000007972) #14	SCP2D1 (ENSOGAG00000004222) #15	SLC24A3 (ENSOGAG00000026410) #16	RIN2 (ENSOGAG00000011531) #18	NAA20 (ENSOGAG00000011542) #19	CRNKL1 (ENSOGAG00000011544) #20	CFAP61 (ENSOGAG00000011546) #21	ENSOGAG00000031837	INSM1 (ENSOGAG00000034802) #22	RALGAPA2 (ENSOGAG00000011557) #23	KIZ (ENSOGAG00000010591) #24	XRN2 (ENSOGAG00000001068) #25	NKX2-4 (ENSOGAG00000024342) #26	ENSOGAG00000025951	NKX2-2 (ENSOGAG00000029474) #27	PAX1 (ENSOGAG00000033162) #28	FOXA2 (ENSOGAG00000033297) #29	ENSOGAG00000025509	SSTR4 (ENSOGAG00000017105) #30	THBD (ENSOGAG00000026061) #31	CD93 (ENSOGAG00000017109) #32	NXT1 (ENSOGAG00000000717) #33	GZF1 (ENSOGAG00000028389) #34	NAPB (ENSOGAG00000012607) #35
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Glires	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Marmotini	ANCESTRAL SPECIES	5	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000007696.e.a.a.a	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Marmotini_b	ANCESTRAL SPECIES	18	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23
Squirrel	MODERN SPECIES	85	OVOL2 (ENSSTOG00000024979)	PET117 (ENSSTOG00000026528)	KAT14 (ENSSTOG00000010238) #7	ZNF133 (ENSSTOG00000013576) #8	DZANK1 (ENSSTOG00000013579) #10	POLR3F (ENSSTOG00000013588) #11	RBBP9 (ENSSTOG00000000821) #12	SEC23B (ENSSTOG00000025438) #13	SMIM26 (ENSSTOG00000033106)	DTD1 (ENSSTOG00000016282) #14	SLC24A3 (ENSSTOG00000009809) #16	RIN2 (ENSSTOG00000014712) #18	NAA20 (ENSSTOG00000014733) #19	CRNKL1 (ENSSTOG00000014747) #20	CFAP61 (ENSSTOG00000014765) #21	INSM1 (ENSSTOG00000022353) #22
Arctic ground squirrel	MODERN SPECIES	233	ZNF133 (ENSUPAG00010003916) #8	DZANK1 (ENSUPAG00010003927) #10	POLR3F (ENSUPAG00010003952) #11	RBBP9 (ENSUPAG00010003965) #12	SEC23B (ENSUPAG00010003976) #13	SMIM26 (ENSUPAG00010004005)	DTD1 (ENSUPAG00010004007) #14	SCP2D1 (ENSUPAG00010004009) #15	SLC24A3 (ENSUPAG00010004015) #16	RIN2 (ENSUPAG00010004049) #18	NAA20 (ENSUPAG00010004110) #19	CRNKL1 (ENSUPAG00010004128) #20	ENSUPAG00010004164 #21	ENSUPAG00010004266 #21	ENSUPAG00010004279	INSM1 (ENSUPAG00010004284) #22	RALGAPA2 (ENSUPAG00010004307) #23
Eurasian red squirrel	MODERN SPECIES	11	ZNF133 (ENSSVLG00005001176) #8	DZANK1 (ENSSVLG00005001106) #10	POLR3F (ENSSVLG00005001072) #11	RBBP9 (ENSSVLG00005001054) #12	SEC23B (ENSSVLG00005001018) #13	SMIM26 (ENSSVLG00005000999)	ENSSVLG00005000978	DTD1 (ENSSVLG00005000962) #14	SCP2D1 (ENSSVLG00005000950) #15	SLC24A3 (ENSSVLG00005000927) #16	RIN2 (ENSSVLG00005000879) #18	NAA20 (ENSSVLG00005000837) #19	CRNKL1 (ENSSVLG00005000792) #20	ENSSVLG00005000777	CFAP61 (ENSSVLG00005000731) #21	INSM1 (ENSSVLG00005000689) #22	RALGAPA2 (ENSSVLG00005000611) #23	ENSSVLG00005000546	KIZ (ENSSVLG00005000513) #24	XRN2 (ENSSVLG00005000470) #25	NKX2-4 (ENSSVLG00005000455) #26	NKX2-2 (ENSSVLG00005000441) #27	PAX1 (ENSSVLG00005000421) #28	ENSSVLG00005000403	FOXA2 (ENSSVLG00005000389) #29	ENSSVLG00005000368	SSTR4 (ENSSVLG00005000359) #30	THBD (ENSSVLG00005000349) #31	CD93 (ENSSVLG00005000330) #32	ENSSVLG00005000317 #33	ENSSVLG00005000304 #33
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987.n.a #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.A
Degu	MODERN SPECIES	114	PET117 (ENSODEG00000011978)	ENSODEG00000012384	KAT14 (ENSODEG00000013036) #7	DZANK1 (ENSODEG00000011655) #10	POLR3F (ENSODEG00000011521) #11	RBBP9 (ENSODEG00000011960) #12	SEC23B (ENSODEG00000011313) #13	DTD1 (ENSODEG00000012785) #14	SLC24A3 (ENSODEG00000012016) #16	RIN2 (ENSODEG00000012000) #18	NAA20 (ENSODEG00000011704) #19	CRNKL1 (ENSODEG00000012175) #20	ENSODEG00000012675 #21	ENSODEG00000012124 #21	ENSODEG00000011346	INSM1 (ENSODEG00000020028) #22	RALGAPA2 (ENSODEG00000011023) #23	KIZ (ENSODEG00000011491) #24	ENSODEG00000011188	ENSODEG00000010745 #25	NKX2-4 (ENSODEG00000010842) #26	ENSODEG00000012687	NKX2-2 (ENSODEG00000012371) #27	ENSODEG00000019885	ENSODEG00000019878	PAX1 (ENSODEG00000012427) #28	FOXA2 (ENSODEG00000011162) #29	THBD (ENSODEG00000010709) #31	CD93 (ENSODEG00000012518) #32	NXT1 (ENSODEG00000019900) #33	GZF1 (ENSODEG00000013020) #34
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Mouse	MODERN SPECIES	11	Ovol2 (ENSMUSG00000037279)	Kat14 (ENSMUSG00000027425) #7	Pet117 (ENSMUSG00000098387)	Dzank1 (ENSMUSG00000037259) #10	Polr3f (ENSMUSG00000027427) #11	Rbbp9 (ENSMUSG00000027428) #12	Sec23b (ENSMUSG00000027429) #13	Smim26 (ENSMUSG00000074754)	Dtd1 (ENSMUSG00000027430) #14	Scp2d1 (ENSMUSG00000027431) #15	Slc24a3 (ENSMUSG00000063873) #16	Rin2 (ENSMUSG00000001768) #18	Naa20 (ENSMUSG00000002728) #19	Crnkl1 (ENSMUSG00000001767) #20	Cfap61 (ENSMUSG00000037143) #21	Insm1 (ENSMUSG00000068154) #22	Ralgapa2 (ENSMUSG00000037110) #23	Kiz (ENSMUSG00000074749) #24	Xrn2 (ENSMUSG00000027433) #25	Nkx2-4 (ENSMUSG00000054160) #26	Nkx2-2 (ENSMUSG00000027434) #27	Pax1 (ENSMUSG00000037034) #28	Foxa2 (ENSMUSG00000037025) #29	Sstr4 (ENSMUSG00000037014) #30	Thbd (ENSMUSG00000074743) #31	Cd93 (ENSMUSG00000027435) #32	Nxt1 (ENSMUSG00000036992) #33	Gzf1 (ENSMUSG00000027439) #34	Napb (ENSMUSG00000027438) #35	Cstl1 (ENSMUSG00000055177) #36	Cst11 (ENSMUSG00000036958) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000003349	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.m #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00970000195442	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
spretus	MODERN SPECIES	11	Mgme1 (MGP_SPRETEiJ_G0025299)	Ovol2 (MGP_SPRETEiJ_G0025300)	Kat14 (MGP_SPRETEiJ_G0025301) #7	Pet117 (MGP_SPRETEiJ_G0025302)	Dzank1 (MGP_SPRETEiJ_G0025303) #10	Polr3f (MGP_SPRETEiJ_G0025304) #11	Rbbp9 (MGP_SPRETEiJ_G0025305) #12	Sec23b (MGP_SPRETEiJ_G0025306) #13	Smim26 (MGP_SPRETEiJ_G0025307)	Dtd1 (MGP_SPRETEiJ_G0025308) #14	Slc24a3 (MGP_SPRETEiJ_G0025309) #16	Rin2 (MGP_SPRETEiJ_G0025310) #18	Naa20 (MGP_SPRETEiJ_G0025311) #19	Crnkl1 (MGP_SPRETEiJ_G0025312) #20	Cfap61 (MGP_SPRETEiJ_G0025313) #21	Insm1 (MGP_SPRETEiJ_G0025314) #22	Ralgapa2 (MGP_SPRETEiJ_G0025315) #23	Kiz (MGP_SPRETEiJ_G0025316) #24	MGP_SPRETEiJ_G0025317	Xrn2 (MGP_SPRETEiJ_G0025318) #25	Nkx2-4 (MGP_SPRETEiJ_G0025319) #26	Nkx2-2 (MGP_SPRETEiJ_G0025320) #27	Pax1 (MGP_SPRETEiJ_G0025321) #28	Foxa2 (MGP_SPRETEiJ_G0025322) #29	Sstr4 (MGP_SPRETEiJ_G0025323) #30	Thbd (MGP_SPRETEiJ_G0025324) #31	Cd93 (MGP_SPRETEiJ_G0025325) #32	Nxt1 (MGP_SPRETEiJ_G0025326) #33	Gzf1 (MGP_SPRETEiJ_G0025327) #34	Napb (MGP_SPRETEiJ_G0025328) #35	Cstl1 (MGP_SPRETEiJ_G0025329) #36
Steppe mouse	MODERN SPECIES	17									ENSMSIG00000013826	Slc24a3 (ENSMSIG00000013851) #16	ENSMSIG00000014037	Rin2 (ENSMSIG00000014047) #18	Naa20 (ENSMSIG00000014125) #19	Crnkl1 (ENSMSIG00000014156) #20	Cfap61 (ENSMSIG00000014190) #21	ENSMSIG00000014314 #22	Ralgapa2 (ENSMSIG00000014327) #23	Kiz (ENSMSIG00000014848) #24	Xrn2 (ENSMSIG00000014908) #25	Nkx2-4 (ENSMSIG00000015047) #26	ENSMSIG00000015060 #27	ENSMSIG00000015077	Pax1 (ENSMSIG00000015104) #28
Ryukyu mouse	MODERN SPECIES	11	Ovol2 (MGP_CAROLIEiJ_G0024381)	Kat14 (MGP_CAROLIEiJ_G0024382) #7	Pet117 (MGP_CAROLIEiJ_G0024383)	Dzank1 (MGP_CAROLIEiJ_G0024384) #10	Polr3f (MGP_CAROLIEiJ_G0024385) #11	Rbbp9 (MGP_CAROLIEiJ_G0024386) #12	Sec23b (MGP_CAROLIEiJ_G0024387) #13	Smim26 (MGP_CAROLIEiJ_G0024388)	Dtd1 (MGP_CAROLIEiJ_G0024389) #14	Scp2d1 (MGP_CAROLIEiJ_G0024390) #15	MGP_CAROLIEiJ_G0024391 #16	Rin2 (MGP_CAROLIEiJ_G0024392) #18	Naa20 (MGP_CAROLIEiJ_G0024393) #19	Crnkl1 (MGP_CAROLIEiJ_G0024394) #20	Cfap61 (MGP_CAROLIEiJ_G0024395) #21	Insm1 (MGP_CAROLIEiJ_G0024396) #22	Ralgapa2 (MGP_CAROLIEiJ_G0024397) #23	Kiz (MGP_CAROLIEiJ_G0024398) #24	MGP_CAROLIEiJ_G0024399	Xrn2 (MGP_CAROLIEiJ_G0024400) #25	Nkx2-4 (MGP_CAROLIEiJ_G0024401) #26	Nkx2-2 (MGP_CAROLIEiJ_G0024402) #27	Pax1 (MGP_CAROLIEiJ_G0024403) #28	Foxa2 (MGP_CAROLIEiJ_G0024404) #29	Sstr4 (MGP_CAROLIEiJ_G0024405) #30	Thbd (MGP_CAROLIEiJ_G0024406) #31	Cd93 (MGP_CAROLIEiJ_G0024407) #32	Nxt1 (MGP_CAROLIEiJ_G0024408) #33	Gzf1 (MGP_CAROLIEiJ_G0024409) #34	Napb (MGP_CAROLIEiJ_G0024410) #35	Cstl1 (MGP_CAROLIEiJ_G0024411) #36
Shrew mouse	MODERN SPECIES	16	Ovol2 (MGP_PahariEiJ_G0025825)	Kat14 (MGP_PahariEiJ_G0025826) #7	Pet117 (MGP_PahariEiJ_G0025827)	Dzank1 (MGP_PahariEiJ_G0025828) #10	Polr3f (MGP_PahariEiJ_G0025829) #11	Rbbp9 (MGP_PahariEiJ_G0025830) #12	Sec23b (MGP_PahariEiJ_G0025831) #13	Smim26 (MGP_PahariEiJ_G0025832)	Dtd1 (MGP_PahariEiJ_G0025833) #14	Scp2d1 (MGP_PahariEiJ_G0025834) #15	MGP_PahariEiJ_G0025835 #16	Rin2 (MGP_PahariEiJ_G0025836) #18	Naa20 (MGP_PahariEiJ_G0025837) #19	Crnkl1 (MGP_PahariEiJ_G0025838) #20	Cfap61 (MGP_PahariEiJ_G0025839) #21	Insm1 (MGP_PahariEiJ_G0025840) #22	Ralgapa2 (MGP_PahariEiJ_G0025841) #23	Kiz (MGP_PahariEiJ_G0025842) #24	Xrn2 (MGP_PahariEiJ_G0025843) #25	Nkx2-4 (MGP_PahariEiJ_G0025844) #26	Nkx2-2 (MGP_PahariEiJ_G0025845) #27	Pax1 (MGP_PahariEiJ_G0025846) #28	Foxa2 (MGP_PahariEiJ_G0025847) #29	Sstr4 (MGP_PahariEiJ_G0025848) #30	Thbd (MGP_PahariEiJ_G0025849) #31	Cd93 (MGP_PahariEiJ_G0025850) #32	Nxt1 (MGP_PahariEiJ_G0025851) #33	Gzf1 (MGP_PahariEiJ_G0025852) #34	Napb (MGP_PahariEiJ_G0025853) #35	Cstl1 (MGP_PahariEiJ_G0025854) #36	Cst11 (MGP_PahariEiJ_G0025855) #37
Rat	MODERN SPECIES	13	Ovol2 (ENSRNOG00000006850)	Kat14 (ENSRNOG00000007160) #7	Zfp133 (ENSRNOG00000027955) #8	Dzank1 (ENSRNOG00000007440) #10	Polr3f (ENSRNOG00000007548) #11	Rbbp9 (ENSRNOG00000007972) #12	Sec23b (ENSRNOG00000008411) #13	Smim26 (ENSRNOG00000036971)	Dtd1 (ENSRNOG00000008746) #14	Scp2d1 (ENSRNOG00000009461) #15	Slc24a3 (ENSRNOG00000060687) #16	Rin2 (ENSRNOG00000010131) #18	Naa20 (ENSRNOG00000010523) #19	Crnkl1 (ENSRNOG00000010587) #20	AABR07054096.1 (ENSRNOG00000011028) #21	Insm1 (ENSRNOG00000068937) #22	Ralgapa2 (ENSRNOG00000036964) #23	ENSRNOG00000070752	Kiz (ENSRNOG00000025141) #24	Xrn2 (ENSRNOG00000011785) #25	Nkx2-4 (ENSRNOG00000012647) #26	Nkx2-2 (ENSRNOG00000012728) #27	Pax1 (ENSRNOG00000024882) #28	Foxa2 (ENSRNOG00000013133) #29	Sstr4 (ENSRNOG00000004641) #30	Thbd (ENSRNOG00000004687) #31	Cd93 (ENSRNOG00000024799) #32	Nxt1 (ENSRNOG00000004700) #33	Gzf1 (ENSRNOG00000004735) #34	Napb (ENSRNOG00000004753) #35	Cstl1 (ENSRNOG00000004779) #36
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Golden Hamster	MODERN SPECIES	650		ENSMAUG00000002240 #10	Polr3f (ENSMAUG00000020176) #11	Rbbp9 (ENSMAUG00000009061) #12	ENSMAUG00000009451 #13	Smim26 (ENSMAUG00000021093)	Dtd1 (ENSMAUG00000021240) #14	Scp2d1 (ENSMAUG00000008663) #15	Slc24a3 (ENSMAUG00000014182) #16	Rin2 (ENSMAUG00000010319) #18	Naa20 (ENSMAUG00000016403) #19	Crnkl1 (ENSMAUG00000020764) #20	ENSMAUG00000014865	ENSMAUG00000018263	Cfap61 (ENSMAUG00000021388) #21	Insm1 (ENSMAUG00000008643) #22	Ralgapa2 (ENSMAUG00000000917) #23	Kiz (ENSMAUG00000012933) #24	Xrn2 (ENSMAUG00000021842) #25	Nkx2-4 (ENSMAUG00000013928) #26	Nkx2-2 (ENSMAUG00000004347) #27	Pax1 (ENSMAUG00000019674) #28	Foxa2 (ENSMAUG00000016457) #29	Sstr4 (ENSMAUG00000008430) #30	Cd93 (ENSMAUG00000019441) #32	Nxt1 (ENSMAUG00000004141) #33	Gzf1 (ENSMAUG00000019656) #34	Napb (ENSMAUG00000018004) #35	Cst12 (ENSMAUG00000010970)	Cst13 (ENSMAUG00000021851)	Cst9 (ENSMAUG00000012174)
Chinese hamster chok1gshd	MODERN SPECIES	188	Snx5 (ENSCGRG00001013269)	MGME1 (ENSCGRG00001019490)	Ovol2 (ENSCGRG00001018332)	Pet117 (ENSCGRG00001015197)	Kat14 (ENSCGRG00001013086) #7	ENSCGRG00001012031 #8	Dzank1 (ENSCGRG00001019385) #10	Polr3f (ENSCGRG00001002032) #11	Rbbp9 (ENSCGRG00001022430) #12	Sec23b (ENSCGRG00001020368) #13	Smim26 (ENSCGRG00001010844)	Dtd1 (ENSCGRG00001008221) #14	Scp2d1 (ENSCGRG00001008412) #15	Slc24a3 (ENSCGRG00001004364) #16	Cfap61 (ENSCGRG00001022702) #21	Insm1 (ENSCGRG00001011430) #22	Ralgapa2 (ENSCGRG00001024249) #23	Kiz (ENSCGRG00001020800) #24	Xrn2 (ENSCGRG00001010676) #25	Nkx2-4 (ENSCGRG00001002742) #26	ENSCGRG00001016394	Nkx2-2 (ENSCGRG00001013924) #27	Pax1 (ENSCGRG00001009223) #28	Foxa2 (ENSCGRG00001000494) #29	Sstr4 (ENSCGRG00001010896) #30	Thbd (ENSCGRG00001010215) #31	Cd93 (ENSCGRG00001016628) #32	ENSCGRG00001007062 #33	Gzf1 (ENSCGRG00001003944) #34	Napb (ENSCGRG00001015884) #35	Cstl1 (ENSCGRG00001006313) #36
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Northern American deer mouse	MODERN SPECIES	17	ENSPEMG00000012956	ENSPEMG00000019835 #8	Dzank1 (ENSPEMG00000019969) #10	Polr3f (ENSPEMG00000006966) #11	Rbbp9 (ENSPEMG00000027962) #12	Sec23b (ENSPEMG00000019699) #13	Smim26 (ENSPEMG00000025969)	Dtd1 (ENSPEMG00000019439) #14	Scp2d1 (ENSPEMG00000012681) #15	ENSPEMG00000027872	Slc24a3 (ENSPEMG00000019985) #16	Rin2 (ENSPEMG00000007218) #18	Naa20 (ENSPEMG00000019944) #19	Crnkl1 (ENSPEMG00000000073) #20	Cfap61 (ENSPEMG00000019999) #21	Insm1 (ENSPEMG00000011704) #22	Ralgapa2 (ENSPEMG00000015207) #23	ENSPEMG00000018301	Kiz (ENSPEMG00000019926) #24	Xrn2 (ENSPEMG00000000111) #25	Nkx2-2 (ENSPEMG00000031205) #27	Pax1 (ENSPEMG00000013032) #28	ENSPEMG00000013352	Foxa2 (ENSPEMG00000018383) #29	Sstr4 (ENSPEMG00000013404) #30	Thbd (ENSPEMG00000013258) #31	Cd93 (ENSPEMG00000009909) #32	Nxt1 (ENSPEMG00000010397) #33	Gzf1 (ENSPEMG00000011285) #34	Napb (ENSPEMG00000014658) #35	Cstl1 (ENSPEMG00000015396) #36
Prairie vole	MODERN SPECIES	86	Pet117 (ENSMOCG00000015322)	Kat14 (ENSMOCG00000013699) #7	ENSMOCG00000009849 #8	Dzank1 (ENSMOCG00000011252) #10	Polr3f (ENSMOCG00000018352) #11	Rbbp9 (ENSMOCG00000014462) #12	Sec23b (ENSMOCG00000003908) #13	ENSMOCG00000016611	Dtd1 (ENSMOCG00000001062) #14	Scp2d1 (ENSMOCG00000005227) #15	Slc24a3 (ENSMOCG00000014059) #16	Rin2 (ENSMOCG00000011014) #18	ENSMOCG00000021892 #19	ENSMOCG00000000681 #20	Cfap61 (ENSMOCG00000001829) #21	Insm1 (ENSMOCG00000010418) #22	Ralgapa2 (ENSMOCG00000015663) #23	ENSMOCG00000020632	Kiz (ENSMOCG00000022509) #24	Xrn2 (ENSMOCG00000012588) #25	Nkx2-4 (ENSMOCG00000012451) #26	Nkx2-2 (ENSMOCG00000016851) #27	Pax1 (ENSMOCG00000000474) #28	Foxa2 (ENSMOCG00000017025) #29	Sstr4 (ENSMOCG00000004743) #30	Thbd (ENSMOCG00000004558) #31	Cd93 (ENSMOCG00000008988) #32	ENSMOCG00000014565	Nxt1 (ENSMOCG00000018712) #33	Gzf1 (ENSMOCG00000017816) #34	Napb (ENSMOCG00000000502) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	450											Slc24a3 (ENSNGAG00000011154) #16	Rin2 (ENSNGAG00000009777) #18	Naa20 (ENSNGAG00000014784) #19	Crnkl1 (ENSNGAG00000023097) #20	Cfap61 (ENSNGAG00000020907) #21	Insm1 (ENSNGAG00000020652) #22	ENSNGAG00000011107 #23	ENSNGAG00000015751 #23	Kiz (ENSNGAG00000013505) #24	Xrn2 (ENSNGAG00000018138) #25	Nkx2-4 (ENSNGAG00000009374) #26	Nkx2-2 (ENSNGAG00000015181) #27	Pax1 (ENSNGAG00000011690) #28
Lesser Egyptian jerboa	MODERN SPECIES	159	ENSJJAG00000014561	Mgme1 (ENSJJAG00000014663)	Ovol2 (ENSJJAG00000014942)	Kat14 (ENSJJAG00000015569) #7	ENSJJAG00000015853	Dzank1 (ENSJJAG00000016670) #10	Polr3f (ENSJJAG00000017513) #11	Rbbp9 (ENSJJAG00000017816) #12	Sec23b (ENSJJAG00000018722) #13	Dtd1 (ENSJJAG00000014379) #14	Slc24a3 (ENSJJAG00000015385) #16	ENSJJAG00000015745 #18	Naa20 (ENSJJAG00000016004) #19	Crnkl1 (ENSJJAG00000016926) #20	Cfap61 (ENSJJAG00000018922) #21	Insm1 (ENSJJAG00000020276) #22	ENSJJAG00000020467 #23	ENSJJAG00000020710 #23	ENSJJAG00000020834	Kiz (ENSJJAG00000021546) #24	Xrn2 (ENSJJAG00000022128) #25	Nkx2-4 (ENSJJAG00000022335) #26	Nkx2-2 (ENSJJAG00000022426) #27	Pax1 (ENSJJAG00000023177) #28	Foxa2 (ENSJJAG00000023228) #29	Sstr4 (ENSJJAG00000023336) #30	Cd93 (ENSJJAG00000007591) #32	ENSJJAG00000012022 #33	Gzf1 (ENSJJAG00000008172) #34	Napb (ENSJJAG00000010872) #35	Cstl1 (ENSJJAG00000011653) #36
Kangaroo rat	MODERN SPECIES	418	Pet117 (ENSDORG00000027184)	Kat14 (ENSDORG00000013195) #7	ENSDORG00000009747 #8	Dzank1 (ENSDORG00000016349) #10	Polr3f (ENSDORG00000016352) #11	Sec23b (ENSDORG00000014203) #13	Dtd1 (ENSDORG00000006940) #14	Scp2d1 (ENSDORG00000002960) #15	Slc24a3 (ENSDORG00000008187) #16	Rin2 (ENSDORG00000000392) #18	Naa20 (ENSDORG00000028339) #19	ENSDORG00000000394 #20	ENSDORG00000024717 #21	ENSDORG00000029623 #21	ENSDORG00000000395	Insm1 (ENSDORG00000009864) #22	ENSDORG00000025962 #23	ENSDORG00000024554 #23	Xrn2 (ENSDORG00000005434) #25	Nkx2-4 (ENSDORG00000023542) #26	Nkx2-2 (ENSDORG00000007972) #27	Pax1 (ENSDORG00000016051) #28	Foxa2 (ENSDORG00000027269) #29	Sstr4 (ENSDORG00000010486) #30	Cd93 (ENSDORG00000028704) #32	Nxt1 (ENSDORG00000024690) #33	Gzf1 (ENSDORG00000011855) #34	Napb (ENSDORG00000011856) #35	Cst12 (ENSDORG00000023744)	Cst8 (ENSDORG00000011859)	Cst13 (ENSDORG00000027228)
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Felidae	ANCESTRAL SPECIES	3	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00520000059926.a.a	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00520000059926.a.a	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046.k #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
lion	MODERN SPECIES	3	OVOL2 (ENSPLOG00000001826)	ENSPLOG00000001815	KAT14 (ENSPLOG00000001794) #7	ZNF133 (ENSPLOG00000001772) #8	DZANK1 (ENSPLOG00000001729) #10	POLR3F (ENSPLOG00000001687) #11	RBBP9 (ENSPLOG00000001658) #12	SEC23B (ENSPLOG00000001608) #13	SMIM26 (ENSPLOG00000001583)	DTD1 (ENSPLOG00000001574) #14	SLC24A3 (ENSPLOG00000001538) #16	RIN2 (ENSPLOG00000001490) #18	NAA20 (ENSPLOG00000001447) #19	CRNKL1 (ENSPLOG00000001416) #20	CFAP61 (ENSPLOG00000001356) #21	INSM1 (ENSPLOG00000001312) #22	RALGAPA2 (ENSPLOG00000001266) #23	KIZ (ENSPLOG00000001155) #24	XRN2 (ENSPLOG00000001042) #25	NKX2-4 (ENSPLOG00000001002) #26	NKX2-2 (ENSPLOG00000000985) #27	PAX1 (ENSPLOG00000000971) #28	FOXA2 (ENSPLOG00000000959) #29	SSTR4 (ENSPLOG00000000946) #30	THBD (ENSPLOG00000000869) #31	CD93 (ENSPLOG00000000855) #32	NXT1 (ENSPLOG00000000844) #33	GZF1 (ENSPLOG00000000839) #34	NAPB (ENSPLOG00000000809) #35	CSTL1 (ENSPLOG00000000776) #36	CST11 (ENSPLOG00000000758) #37
leopard	MODERN SPECIES	39	OVOL2 (ENSPPRG00000006276)	ENSPPRG00000006693	KAT14 (ENSPPRG00000008577) #7	ZNF133 (ENSPPRG00000010030) #8	DZANK1 (ENSPPRG00000021983) #10	POLR3F (ENSPPRG00000024604) #11	RBBP9 (ENSPPRG00000024506) #12	SEC23B (ENSPPRG00000024318) #13	DTD1 (ENSPPRG00000023943) #14	SCP2D1 (ENSPPRG00000021046) #15	SLC24A3 (ENSPPRG00000022720) #16	ENSPPRG00000000577 #18	ENSPPRG00000001197 #19	CRNKL1 (ENSPPRG00000001955) #20	CFAP61 (ENSPPRG00000004321) #21	INSM1 (ENSPPRG00000021271) #22	RALGAPA2 (ENSPPRG00000006401) #23	KIZ (ENSPPRG00000007745) #24	XRN2 (ENSPPRG00000008732) #25	NKX2-4 (ENSPPRG00000008761) #26	NKX2-2 (ENSPPRG00000008916) #27	PAX1 (ENSPPRG00000009070) #28	FOXA2 (ENSPPRG00000009206) #29	SSTR4 (ENSPPRG00000021367) #30	THBD (ENSPPRG00000021378) #31	CD93 (ENSPPRG00000009570) #32	NXT1 (ENSPPRG00000021392) #33	GZF1 (ENSPPRG00000010040) #34	NAPB (ENSPPRG00000010805) #35	ENSPPRG00000011394	CST11 (ENSPPRG00000011764) #37
Cat	MODERN SPECIES	2	KAT14 (ENSFCAG00000005811) #7	ZNF133 (ENSFCAG00000014251) #8	DZANK1 (ENSFCAG00000025812) #10	POLR3F (ENSFCAG00000013828) #11	RBBP9 (ENSFCAG00000040375) #12	SEC23B (ENSFCAG00000013833) #13	SMIM26 (ENSFCAG00000048664)	DTD1 (ENSFCAG00000013835) #14	ENSFCAG00000051916	SCP2D1 (ENSFCAG00000003254) #15	SLC24A3 (ENSFCAG00000008015) #16	RIN2 (ENSFCAG00000014527) #18	NAA20 (ENSFCAG00000028113) #19	CRNKL1 (ENSFCAG00000000714) #20	CFAP61 (ENSFCAG00000000715) #21	INSM1 (ENSFCAG00000040680) #22	RALGAPA2 (ENSFCAG00000028385) #23	KIZ (ENSFCAG00000007966) #24	XRN2 (ENSFCAG00000007970) #25	NKX2-4 (ENSFCAG00000045261) #26	NKX2-2 (ENSFCAG00000008740) #27	PAX1 (ENSFCAG00000004293) #28	FOXA2 (ENSFCAG00000012368) #29	SSTR4 (ENSFCAG00000022777) #30	THBD (ENSFCAG00000011513) #31	CD93 (ENSFCAG00000025238) #32	NXT1 (ENSFCAG00000006482) #33	GZF1 (ENSFCAG00000006484) #34	NAPB (ENSFCAG00000037279) #35	CSTL1 (ENSFCAG00000041684) #36	CST11 (ENSFCAG00000003949) #37
Caniformia	ANCESTRAL SPECIES		ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Mustelinae	ANCESTRAL SPECIES	43	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
American mink	MODERN SPECIES	430										RIN2 (ENSNVIG00000007999) #18	NAA20 (ENSNVIG00000007901) #19	CRNKL1 (ENSNVIG00000007860) #20	ENSNVIG00000007840 #21	ENSNVIG00000007820 #21	ENSNVIG00000007818	INSM1 (ENSNVIG00000007814) #22	RALGAPA2 (ENSNVIG00000007727) #23
Ferret	MODERN SPECIES	204	ZNF133 (ENSMPUG00000001287) #8	DZANK1 (ENSMPUG00000001282) #10	ENSMPUG00000001252 #11	RBBP9 (ENSMPUG00000001244) #12	SEC23B (ENSMPUG00000001242) #13	SMIM26 (ENSMPUG00000001239)	DTD1 (ENSMPUG00000001238) #14	SCP2D1 (ENSMPUG00000019276) #15	ENSMPUG00000001236	SLC24A3 (ENSMPUG00000001234) #16	ENSMPUG00000001233	RIN2 (ENSMPUG00000001230) #18	NAA20 (ENSMPUG00000001228) #19	CRNKL1 (ENSMPUG00000001226) #20	CFAP61 (ENSMPUG00000001219) #21	INSM1 (ENSMPUG00000001216) #22	RALGAPA2 (ENSMPUG00000001210) #23	ENSMPUG00000001204	ENSMPUG00000019274	KIZ (ENSMPUG00000001201) #24	XRN2 (ENSMPUG00000001198) #25	NKX2-2 (ENSMPUG00000001196) #27	PAX1 (ENSMPUG00000001187) #28	ENSMPUG00000001167	FOXA2 (ENSMPUG00000001166) #29	SSTR4 (ENSMPUG00000019271) #30	THBD (ENSMPUG00000019265) #31	CD93 (ENSMPUG00000001163) #32	NXT1 (ENSMPUG00000019260) #33	GZF1 (ENSMPUG00000001160) #34	NAPB (ENSMPUG00000001158) #35
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Equus	ANCESTRAL SPECIES	8	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00510000047812.l	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Horse	MODERN SPECIES	14	OVOL2 (ENSECAG00000007899)	PET117 (ENSECAG00000035710)	KAT14 (ENSECAG00000017543) #7	ZNF133 (ENSECAG00000015243) #8	ENSECAG00000053292	DZANK1 (ENSECAG00000017081) #10	POLR3F (ENSECAG00000009920) #11	RBBP9 (ENSECAG00000001333) #12	SEC23B (ENSECAG00000025087) #13	DTD1 (ENSECAG00000025075) #14	SLC24A3 (ENSECAG00000019334) #16	RIN2 (ENSECAG00000015381) #18	NAA20 (ENSECAG00000012609) #19	CRNKL1 (ENSECAG00000022215) #20	CFAP61 (ENSECAG00000004364) #21	INSM1 (ENSECAG00000037552) #22	RALGAPA2 (ENSECAG00000019950) #23	ENSECAG00000036437	KIZ (ENSECAG00000016626) #24	XRN2 (ENSECAG00000018988) #25	NKX2-4 (ENSECAG00000037105) #26	NKX2-2 (ENSECAG00000018977) #27	PAX1 (ENSECAG00000016945) #28	FOXA2 (ENSECAG00000032004) #29	THBD (ENSECAG00000005241) #31	CD93 (ENSECAG00000016324) #32	NXT1 (ENSECAG00000035032) #33	GZF1 (ENSECAG00000011343) #34	NAPB (ENSECAG00000022016) #35	CSTL1 (ENSECAG00000019672) #36	CST11 (ENSECAG00000016342) #37
Donkey	MODERN SPECIES	6	OVOL2 (ENSEASG00005028180)	PET117 (ENSEASG00005029225)	KAT14 (ENSEASG00005001999) #7	ZNF133 (ENSEASG00005002007) #8	DZANK1 (ENSEASG00005002015) #10	POLR3F (ENSEASG00005002022) #11	RBBP9 (ENSEASG00005023627) #12	SEC23B (ENSEASG00005002036) #13	DTD1 (ENSEASG00005002041) #14	SCP2D1 (ENSEASG00005037273) #15	SLC24A3 (ENSEASG00005002055) #16	RIN2 (ENSEASG00005002067) #18	NAA20 (ENSEASG00005002069) #19	CRNKL1 (ENSEASG00005002072) #20	CFAP61 (ENSEASG00005002079) #21	INSM1 (ENSEASG00005002118) #22	RALGAPA2 (ENSEASG00005002224) #23	ENSEASG00005002454	KIZ (ENSEASG00005002467) #24	XRN2 (ENSEASG00005002484) #25	NKX2-4 (ENSEASG00005002501) #26	NKX2-2 (ENSEASG00005038540) #27	PAX1 (ENSEASG00005002521) #28	FOXA2 (ENSEASG00005002535) #29	SSTR4 (ENSEASG00005002540) #30	THBD (ENSEASG00005027531) #31	CD93 (ENSEASG00005002547) #32	NXT1 (ENSEASG00005033641) #33	GZF1 (ENSEASG00005002557) #34	NAPB (ENSEASG00005002564) #35	CSTL1 (ENSEASG00005002572) #36
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000165454
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000165454
Greater horseshoe bat	MODERN SPECIES	15	ZNF133 (ENSRFEG00010008595) #8	ENSRFEG00010008604	DZANK1 (ENSRFEG00010008657) #10	POLR3F (ENSRFEG00010008934) #11	RBBP9 (ENSRFEG00010008976) #12	SEC23B (ENSRFEG00010009046) #13	SMIM26 (ENSRFEG00010009139)	DTD1 (ENSRFEG00010009168) #14	ENSRFEG00010009202	SLC24A3 (ENSRFEG00010009266) #16	ENSRFEG00010009294	RIN2 (ENSRFEG00010009330) #18	NAA20 (ENSRFEG00010009410) #19	CRNKL1 (ENSRFEG00010009485) #20	CFAP61 (ENSRFEG00010009533) #21	INSM1 (ENSRFEG00010009617) #22	RALGAPA2 (ENSRFEG00010009655) #23	ENSRFEG00010009788	KIZ (ENSRFEG00010009832) #24	ENSRFEG00010010021	XRN2 (ENSRFEG00010010058) #25	NKX2-4 (ENSRFEG00010010146) #26	NKX2-2 (ENSRFEG00010010185) #27	PAX1 (ENSRFEG00010010205) #28	ENSRFEG00010010271	FOXA2 (ENSRFEG00010010354) #29	ENSRFEG00010010431	ENSRFEG00010010499	THBD (ENSRFEG00010010533) #31	CD93 (ENSRFEG00010010553) #32	NXT1 (ENSRFEG00010010600) #33
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Suina	ANCESTRAL SPECIES	9	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000165454
Pig	MODERN SPECIES	8	PET117 (ENSSSCG00000052391)	KAT14 (ENSSSCG00000007092) #7	ZNF133 (ENSSSCG00000007093) #8	DZANK1 (ENSSSCG00000007094) #10	POLR3F (ENSSSCG00000007095) #11	RBBP9 (ENSSSCG00000029494) #12	SEC23B (ENSSSCG00000007097) #13	SMIM26 (ENSSSCG00000025589)	DTD1 (ENSSSCG00000007098) #14	SCP2D1 (ENSSSCG00000007099) #15	SLC24A3 (ENSSSCG00000007100) #16	ENSSSCG00000028004 #18	NAA20 (ENSSSCG00000028132) #19	CRNKL1 (ENSSSCG00000038587) #20	CFAP61 (ENSSSCG00000038858) #21	INSM1 (ENSSSCG00000062159) #22	RALGAPA2 (ENSSSCG00000026506) #23	ENSSSCG00000048962	KIZ (ENSSSCG00000007108) #24	XRN2 (ENSSSCG00000007109) #25	NKX2-4 (ENSSSCG00000007110) #26	NKX2-2 (ENSSSCG00000040017) #27	PAX1 (ENSSSCG00000007112) #28	FOXA2 (ENSSSCG00000007114) #29	THBD (ENSSSCG00000053422) #31	CD93 (ENSSSCG00000007116) #32	NXT1 (ENSSSCG00000007119) #33	GZF1 (ENSSSCG00000007117) #34	NAPB (ENSSSCG00000031219) #35	CSTL1 (ENSSSCG00000007121) #36	CST11 (ENSSSCG00000007122) #37
Chacoan peccary	MODERN SPECIES	801	OVOL2 (ENSCWAG00000010521)	KAT14 (ENSCWAG00000010453) #7	ZNF133 (ENSCWAG00000010383) #8	DZANK1 (ENSCWAG00000010266) #10	ENSCWAG00000010194 #11	RBBP9 (ENSCWAG00000010152) #12	SEC23B (ENSCWAG00000010080) #13	SMIM26 (ENSCWAG00000010058)	DTD1 (ENSCWAG00000010021) #14	SCP2D1 (ENSCWAG00000010002) #15	SLC24A3 (ENSCWAG00000009885) #16	ENSCWAG00000009830 #18	NAA20 (ENSCWAG00000009645) #19	CRNKL1 (ENSCWAG00000009575) #20	CFAP61 (ENSCWAG00000009261) #21	INSM1 (ENSCWAG00000009223) #22	RALGAPA2 (ENSCWAG00000008863) #23	KIZ (ENSCWAG00000008351) #24	XRN2 (ENSCWAG00000008201) #25	NKX2-4 (ENSCWAG00000008162) #26	NKX2-2 (ENSCWAG00000008122) #27	PAX1 (ENSCWAG00000008052) #28	FOXA2 (ENSCWAG00000007985) #29	THBD (ENSCWAG00000017996) #31	CD93 (ENSCWAG00000017965) #32	NXT1 (ENSCWAG00000017956) #33	GZF1 (ENSCWAG00000017910) #34	NAPB (ENSCWAG00000017225) #35	CSTL1 (ENSCWAG00000017189) #36	CST11 (ENSCWAG00000017158) #37	ENSCWAG00000017127
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000162260 #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000162260.h #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000162260.g.a #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000162260.g.a #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000162260.g.a #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00940000155255.q.b	ENSGT00390000014105.n	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Vaquita	MODERN SPECIES	6	POLR3F (ENSPSNG00000005760) #11	RBBP9 (ENSPSNG00000005733) #12	SEC23B (ENSPSNG00000005676) #13	SMIM26 (ENSPSNG00000005643)	DTD1 (ENSPSNG00000005619) #14	SCP2D1 (ENSPSNG00000005607) #15	SLC24A3 (ENSPSNG00000005554) #16	RIN2 (ENSPSNG00000005508) #18	NAA20 (ENSPSNG00000005428) #19	CRNKL1 (ENSPSNG00000005386) #20	ENSPSNG00000005363	BLCAP (ENSPSNG00000005346)	ENSPSNG00000005292 #21	ENSPSNG00000005250 #21	ENSPSNG00000005235	INSM1 (ENSPSNG00000005223) #22	ENSPSNG00000005197 #23	ENSPSNG00000005168 #23	KIZ (ENSPSNG00000005041) #24	XRN2 (ENSPSNG00000004918) #25	NKX2-4 (ENSPSNG00000004868) #26	NKX2-2 (ENSPSNG00000004832) #27	PAX1 (ENSPSNG00000004773) #28	FOXA2 (ENSPSNG00000004696) #29	SSTR4 (ENSPSNG00000011467) #30	THBD (ENSPSNG00000011441) #31	CD93 (ENSPSNG00000011407) #32	NXT1 (ENSPSNG00000011355) #33	GZF1 (ENSPSNG00000011314) #34	ENSPSNG00000011208 #35	ENSPSNG00000011147
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01000000221541	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00940000155255.q.b	ENSGT00390000014105.n	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Narwhal	MODERN SPECIES	299	ENSMMNG00015014525 #8	DZANK1 (ENSMMNG00015014485) #10	POLR3F (ENSMMNG00015014457) #11	RBBP9 (ENSMMNG00015014446) #12	SEC23B (ENSMMNG00015014406) #13	SMIM26 (ENSMMNG00015014382)	DTD1 (ENSMMNG00015014368) #14	SCP2D1 (ENSMMNG00015014357) #15	SLC24A3 (ENSMMNG00015014333) #16	RIN2 (ENSMMNG00015014306) #18	NAA20 (ENSMMNG00015014274) #19	CRNKL1 (ENSMMNG00015014256) #20	ENSMMNG00015014247	ENSMMNG00015014237	CFAP61 (ENSMMNG00015014206) #21	INSM1 (ENSMMNG00015014194) #22	RALGAPA2 (ENSMMNG00015014137) #23	KIZ (ENSMMNG00015014032) #24	XRN2 (ENSMMNG00015013954) #25	NKX2-4 (ENSMMNG00015013943) #26	NKX2-2 (ENSMMNG00015013937) #27	PAX1 (ENSMMNG00015013924) #28	FOXA2 (ENSMMNG00015013909) #29	SSTR4 (ENSMMNG00015013888) #30	THBD (ENSMMNG00015013881) #31	CD93 (ENSMMNG00015013869) #32	NXT1 (ENSMMNG00015013866) #33	GZF1 (ENSMMNG00015013857) #34	ENSMMNG00015013840 #35	CSTL1 (ENSMMNG00015013827) #36	CST11 (ENSMMNG00015013816) #37
Sperm whale	MODERN SPECIES	5	PET117 (ENSPCTG00005012368)	KAT14 (ENSPCTG00005012290) #7	ENSPCTG00005012165 #8	DZANK1 (ENSPCTG00005011932) #10	POLR3F (ENSPCTG00005011873) #11	RBBP9 (ENSPCTG00005011839) #12	SEC23B (ENSPCTG00005011745) #13	SMIM26 (ENSPCTG00005011687)	DTD1 (ENSPCTG00005011639) #14	SCP2D1 (ENSPCTG00005011622) #15	SLC24A3 (ENSPCTG00005011433) #16	ENSPCTG00005011375 #18	NAA20 (ENSPCTG00005011278) #19	CRNKL1 (ENSPCTG00005011230) #20	CFAP61 (ENSPCTG00005011086) #21	INSM1 (ENSPCTG00005011042) #22	RALGAPA2 (ENSPCTG00005010848) #23	KIZ (ENSPCTG00005010162) #24	XRN2 (ENSPCTG00005010006) #25	NKX2-4 (ENSPCTG00005009959) #26	NKX2-2 (ENSPCTG00005009931) #27	PAX1 (ENSPCTG00005009858) #28	FOXA2 (ENSPCTG00005009780) #29	SSTR4 (ENSPCTG00005009716) #30	CD93 (ENSPCTG00005009671) #32	CST3 (ENSPCTG00005009637)	ENSPCTG00005009585	ENSPCTG00005009530	ENSPCTG00005009487	ENSPCTG00005009442	CST11 (ENSPCTG00005009381) #37
Blue whale	MODERN SPECIES	6	OVOL2 (ENSBMSG00010015464)	PET117 (ENSBMSG00010015436)	KAT14 (ENSBMSG00010015393) #7	ZNF133 (ENSBMSG00010015302) #8	DZANK1 (ENSBMSG00010015220) #10	POLR3F (ENSBMSG00010015197) #11	RBBP9 (ENSBMSG00010015177) #12	SEC23B (ENSBMSG00010015074) #13	SMIM26 (ENSBMSG00010015007)	DTD1 (ENSBMSG00010014971) #14	SLC24A3 (ENSBMSG00010014883) #16	RIN2 (ENSBMSG00010014833) #18	NAA20 (ENSBMSG00010014762) #19	CRNKL1 (ENSBMSG00010014711) #20	CFAP61 (ENSBMSG00010014638) #21	INSM1 (ENSBMSG00010014572) #22	RALGAPA2 (ENSBMSG00010014396) #23	KIZ (ENSBMSG00010014281) #24	XRN2 (ENSBMSG00010014058) #25	NKX2-4 (ENSBMSG00010013938) #26	NKX2-2 (ENSBMSG00010013921) #27	PAX1 (ENSBMSG00010013891) #28	FOXA2 (ENSBMSG00010013859) #29	SSTR4 (ENSBMSG00010013828) #30	THBD (ENSBMSG00010012612) #31	CD93 (ENSBMSG00010012595) #32	NXT1 (ENSBMSG00010012589) #33	ENSBMSG00010012580 #34	ENSBMSG00010012568 #34	NAPB (ENSBMSG00010012544) #35	CSTL1 (ENSBMSG00010012521) #36
Pecora	ANCESTRAL SPECIES	9	ENSGT00390000001146 #7	ENSGT00940000162260.h #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.B
Percora_a	ANCESTRAL SPECIES	10	ENSGT00390000001146 #7	ENSGT00940000162260.h #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.B
Bovidae	ANCESTRAL SPECIES	10	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37	ENSGT00940000162636.B
Caprinae	ANCESTRAL SPECIES	23	ENSGT00390000001146 #7	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b.b #14	ENSGT00860000134050	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00390000001138.a.g	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000155114.wb.b	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00950000183014.f.a.h.u.a.a.b.a	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36
Goat	MODERN SPECIES	4	KAT14 (ENSCHIG00000023963) #7	ENSCHIG00000015086 #8	DZANK1 (ENSCHIG00000023950) #10	POLR3F (ENSCHIG00000014743) #11	RBBP9 (ENSCHIG00000024182) #12	SEC23B (ENSCHIG00000016382) #13	ENSCHIG00000024743 #14	SCP2D1 (ENSCHIG00000007792) #15	SLC24A3 (ENSCHIG00000010684) #16	ENSCHIG00000008840	ENSCHIG00000020114	RIN2 (ENSCHIG00000009997) #18	NAA20 (ENSCHIG00000021922) #19	CRNKL1 (ENSCHIG00000013171) #20	CFAP61 (ENSCHIG00000022048) #21	INSM1 (ENSCHIG00000002944) #22	RALGAPA2 (ENSCHIG00000023081) #23	ENSCHIG00000005268	ENSCHIG00000001410	KIZ (ENSCHIG00000020496) #24	XRN2 (ENSCHIG00000006921) #25	ENSCHIG00000009213	NKX2-4 (ENSCHIG00000017092) #26	NKX2-2 (ENSCHIG00000025252) #27	PAX1 (ENSCHIG00000025250) #28	FOXA2 (ENSCHIG00000013879) #29	ENSCHIG00000022438	THBD (ENSCHIG00000010975) #31	CD93 (ENSCHIG00000009092) #32	ENSCHIG00000021979	GZF1 (ENSCHIG00000008882) #34
Rambouillet Sheep	MODERN SPECIES	4	ENSOARG00020022530 #8	ENSOARG00020022555 #8	DZANK1 (ENSOARG00020022592) #10	POLR3F (ENSOARG00020022881) #11	RBBP9 (ENSOARG00020022901) #12	SEC23B (ENSOARG00020022920) #13	SMIM26 (ENSOARG00020022969)	ENSOARG00020023011 #14	SCP2D1 (ENSOARG00020023032) #15	SLC24A3 (ENSOARG00020023051) #16	ENSOARG00020023127	RIN2 (ENSOARG00020003240) #18	NAA20 (ENSOARG00020003499) #19	CRNKL1 (ENSOARG00020003543) #20	CFAP61 (ENSOARG00020003632) #21	INSM1 (ENSOARG00020003800) #22	RALGAPA2 (ENSOARG00020003837) #23	KIZ (ENSOARG00020004321) #24	XRN2 (ENSOARG00020004498) #25	NKX2-4 (ENSOARG00020004533) #26	NKX2-2 (ENSOARG00020004554) #27	PAX1 (ENSOARG00020004579) #28	ENSOARG00020004631	FOXA2 (ENSOARG00020004643) #29	ENSOARG00020004667	CD93 (ENSOARG00020004706) #32	ENSOARG00020004719	NXT1 (ENSOARG00020004744) #33	GZF1 (ENSOARG00020004766) #34	NAPB (ENSOARG00020004860) #35	CSTL1 (ENSOARG00020005157) #36
Bovinae	ANCESTRAL SPECIES	20	ENSGT00390000001146 #7	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00390000001138.a.g.b	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Bos	ANCESTRAL SPECIES	22	ENSGT00940000162260.h.a.a #8	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00390000001138.a.g.b	ENSGT00940000154866.B.d #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159137.d #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554.jb #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00950000183210.d.a.c.a.a.b.f.a.b	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00390000001138.a.g.b	ENSGT00940000154866.B.d #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000153362.a.bb.b.a	ENSGT00940000159137.d #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554.jb #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Hybrid Bos Indicus	MODERN SPECIES	4	ENSBIXG00005009868 #8	DZANK1 (ENSBIXG00005009929) #10	POLR3F (ENSBIXG00005009958) #11	RBBP9 (ENSBIXG00005009978) #12	SEC23B (ENSBIXG00005010022) #13	SMIM26 (ENSBIXG00005000771)	ENSBIXG00005010061	DTD1 (ENSBIXG00005010081) #14	SCP2D1 (ENSBIXG00005000779) #15	SLC24A3 (ENSBIXG00005010121) #16	ENSBIXG00005010143	RIN2 (ENSBIXG00005010179) #18	NAA20 (ENSBIXG00005010224) #19	CRNKL1 (ENSBIXG00005010247) #20	CFAP61 (ENSBIXG00005010280) #21	INSM1 (ENSBIXG00005010299) #22	RALGAPA2 (ENSBIXG00005010322) #23	ENSBIXG00005010385 #24	XRN2 (ENSBIXG00005006105) #25	ENSBIXG00005000714 #26	ENSBIXG00005000694	PAX1 (ENSBIXG00005010606) #28	FOXA2 (ENSBIXG00005000913) #29	THBD (ENSBIXG00005010640) #31	ENSBIXG00005000916	CD93 (ENSBIXG00005010666) #32	NXT1 (ENSBIXG00005010690) #33	GZF1 (ENSBIXG00005010698) #34	NAPB (ENSBIXG00005000942) #35	ENSBIXG00005000943 #36	ENSBIXG00005010800 #37
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000162260.h.a.b #8	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00950000183210.d.a.c.a.a.b.f.a.b	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00960000190537	ENSGT00940000154866.B.d #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159137.d #28	ENSGT00940000155999 #29	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041 #33	ENSGT00870000136554.jb #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Domestic yak	MODERN SPECIES	3	KAT14 (ENSBGRG00000005198) #7	ZNF133 (ENSBGRG00000005240) #8	DZANK1 (ENSBGRG00000005266) #10	POLR3F (ENSBGRG00000005416) #11	RBBP9 (ENSBGRG00000005523) #12	SEC23B (ENSBGRG00000005623) #13	SMIM26 (ENSBGRG00000005700)	DTD1 (ENSBGRG00000005731) #14	ENSBGRG00000005768	SLC24A3 (ENSBGRG00000005785) #16	ENSBGRG00000005832 #18	ENSBGRG00000005870 #18	NAA20 (ENSBGRG00000005893) #19	CRNKL1 (ENSBGRG00000006006) #20	CFAP61 (ENSBGRG00000006111) #21	INSM1 (ENSBGRG00000006219) #22	ENSBGRG00000006247 #23	ENSBGRG00000006333 #23	KIZ (ENSBGRG00000006486) #24	XRN2 (ENSBGRG00000006633) #25	NKX2-4 (ENSBGRG00000006760) #26	NKX2-2 (ENSBGRG00000006790) #27	ENSBGRG00000006808	ENSBGRG00000006824 #28	PAX1 (ENSBGRG00000006855) #28	FOXA2 (ENSBGRG00000006927) #29	THBD (ENSBGRG00000006963) #31	CD93 (ENSBGRG00000006986) #32	ENSBGRG00000007043	NXT1 (ENSBGRG00000007076) #33	ENSBGRG00000007097 #34
American bison	MODERN SPECIES	2997			DZANK1 (ENSBBBG00000006112) #10	POLR3F (ENSBBBG00000023256) #11	RBBP9 (ENSBBBG00000006080) #12	SEC23B (ENSBBBG00000023236) #13	SMIM26 (ENSBBBG00000000399)	DTD1 (ENSBBBG00000000410) #14	SCP2D1 (ENSBBBG00000000425) #15	SLC24A3 (ENSBBBG00000000461) #16	ENSBBBG00000023147	RIN2 (ENSBBBG00000023140) #18	NAA20 (ENSBBBG00000023097) #19	CRNKL1 (ENSBBBG00000008793) #20	CFAP61 (ENSBBBG00000006046) #21	ENSBBBG00000022996 #22	RALGAPA2 (ENSBBBG00000022984) #23	KIZ (ENSBBBG00000022908) #24	XRN2 (ENSBBBG00000022814) #25	ENSBBBG00000022786 #27	ENSBBBG00000022780	PAX1 (ENSBBBG00000022763) #28	FOXA2 (ENSBBBG00000022700) #29	THBD (ENSBBBG00000022684) #31	CD93 (ENSBBBG00000005967) #32	GZF1 (ENSBBBG00000022655) #34	NAPB (ENSBBBG00000022632) #35	CSTL1 (ENSBBBG00000022543) #36	ENSBBBG00000022535 #37	ENSBBBG00000022528	ENSBBBG00000005942
Siberian musk deer	MODERN SPECIES	1194	ZNF133 (ENSMMSG00000020117) #8	DZANK1 (ENSMMSG00000020027) #10	POLR3F (ENSMMSG00000019988) #11	RBBP9 (ENSMMSG00000019965) #12	SEC23B (ENSMMSG00000019873) #13	ENSMMSG00000019846	DTD1 (ENSMMSG00000019829) #14	SCP2D1 (ENSMMSG00000019818) #15	SLC24A3 (ENSMMSG00000019736) #16	RIN2 (ENSMMSG00000019665) #18	NAA20 (ENSMMSG00000019613) #19	CRNKL1 (ENSMMSG00000019594) #20	ENSMMSG00000019564 #21	ENSMMSG00000019535 #21	ENSMMSG00000019522	INSM1 (ENSMMSG00000019511) #22	RALGAPA2 (ENSMMSG00000019313) #23	KIZ (ENSMMSG00000019151) #24	XRN2 (ENSMMSG00000019064) #25	NKX2-4 (ENSMMSG00000019032) #26	ENSMMSG00000019016	ENSMMSG00000018994	NKX2-2 (ENSMMSG00000018973) #27	PAX1 (ENSMMSG00000018943) #28	FOXA2 (ENSMMSG00000018910) #29	THBD (ENSMMSG00000018897) #31	CD93 (ENSMMSG00000018871) #32	NXT1 (ENSMMSG00000018866) #33	GZF1 (ENSMMSG00000018836) #34	NAPB (ENSMMSG00000018763) #35	CSTL1 (ENSMMSG00000018731) #36
Yarkand deer	MODERN SPECIES	15	ENSCHYG00000018765	ZNF133 (ENSCHYG00000018818) #8	DZANK1 (ENSCHYG00000018900) #10	POLR3F (ENSCHYG00000019333) #11	RBBP9 (ENSCHYG00000019457) #12	SEC23B (ENSCHYG00000019541) #13	SMIM26 (ENSCHYG00000019910)	DTD1 (ENSCHYG00000019989) #14	SCP2D1 (ENSCHYG00000020102) #15	SLC24A3 (ENSCHYG00000020129) #16	ENSCHYG00000020275	RIN2 (ENSCHYG00000020319) #18	NAA20 (ENSCHYG00000020635) #19	CRNKL1 (ENSCHYG00000020782) #20	CFAP61 (ENSCHYG00000020914) #21	INSM1 (ENSCHYG00000021030) #22	RALGAPA2 (ENSCHYG00000021147) #23	KIZ (ENSCHYG00000022176) #24	ENSCHYG00000022734	ENSCHYG00000022761	XRN2 (ENSCHYG00000022819) #25	NKX2-4 (ENSCHYG00000023282) #26	NKX2-2 (ENSCHYG00000023304) #27	ENSCHYG00000023344	PAX1 (ENSCHYG00000023364) #28	FOXA2 (ENSCHYG00000023420) #29	ENSCHYG00000023462	ENSCHYG00000023501	THBD (ENSCHYG00000023542) #31	CD93 (ENSCHYG00000023556) #32	NXT1 (ENSCHYG00000023576) #33
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041.l #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Xenarthra	ANCESTRAL SPECIES	347											ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28
Armadillo	MODERN SPECIES	425										ENSDNOG00000004039	SLC24A3 (ENSDNOG00000016125) #16	RIN2 (ENSDNOG00000016218) #18	NAA20 (ENSDNOG00000034715) #19	CRNKL1 (ENSDNOG00000016226) #20	CFAP61 (ENSDNOG00000016231) #21	INSM1 (ENSDNOG00000033318) #22	RALGAPA2 (ENSDNOG00000016236) #23	KIZ (ENSDNOG00000046969) #24	XRN2 (ENSDNOG00000001895) #25	NKX2-4 (ENSDNOG00000040998) #26	ENSDNOG00000025932	NKX2-2 (ENSDNOG00000038407) #27	PAX1 (ENSDNOG00000033546) #28
Afrotheria	ANCESTRAL SPECIES	3	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041.l #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Afrotheria_a	ANCESTRAL SPECIES	3	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00940000162041.l #33	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00900000141212 #36	ENSGT00910000144356 #37
Elephant	MODERN SPECIES	180	KAT14 (ENSLAFG00000005652) #7	DZANK1 (ENSLAFG00000010369) #10	POLR3F (ENSLAFG00000004929) #11	RBBP9 (ENSLAFG00000001273) #12	SEC23B (ENSLAFG00000004934) #13	ENSLAFG00000032592	DTD1 (ENSLAFG00000003645) #14	SCP2D1 (ENSLAFG00000007035) #15	SLC24A3 (ENSLAFG00000012423) #16	RIN2 (ENSLAFG00000015169) #18	NAA20 (ENSLAFG00000004510) #19	CRNKL1 (ENSLAFG00000004512) #20	ENSLAFG00000004520 #21	ENSLAFG00000028424 #21	ENSLAFG00000029531	INSM1 (ENSLAFG00000011594) #22	ENSLAFG00000011596 #23	ENSLAFG00000032497 #23	KIZ (ENSLAFG00000002389) #24	XRN2 (ENSLAFG00000014624) #25	ENSLAFG00000014638 #26	NKX2-2 (ENSLAFG00000002379) #27	PAX1 (ENSLAFG00000008908) #28	ENSLAFG00000031871	FOXA2 (ENSLAFG00000026345) #29	ENSLAFG00000032254 #30	THBD (ENSLAFG00000012832) #31	CD93 (ENSLAFG00000027545) #32	NXT1 (ENSLAFG00000029098) #33	GZF1 (ENSLAFG00000002458) #34	NAPB (ENSLAFG00000002461) #35
Marsupialia	ANCESTRAL SPECIES	19	ENSGT00940000159359	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.g #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000163249	ENSGT00940000154755.b	ENSGT00950000183147.B
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.g #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000163249	ENSGT00940000154755.b	ENSGT00950000183147.B
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.g #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000163249	ENSGT00940000154755.b	ENSGT00950000183147.B
Wallaby	MODERN SPECIES	8211																ENSMEUG00000003157 #22
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00860000134050	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931.g #20	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000163276 #31	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000163249	ENSGT00940000154755.b	ENSGT00950000183147.B
Common wonbat	MODERN SPECIES	1073	SEC23B (ENSVURG00010006298) #13	ENSVURG00010006286	DTD1 (ENSVURG00010006268) #14	SCP2D1 (ENSVURG00010006243) #15	ENSVURG00010006221	SLC24A3 (ENSVURG00010006055) #16	RIN2 (ENSVURG00010005982) #18	ENSVURG00010005965	NAA20 (ENSVURG00010005948) #19	ENSVURG00010005903 #20	ENSVURG00010005888 #21	ENSVURG00010005874 #21	ENSVURG00010005844 #21	ENSVURG00010005838	ENSVURG00010005834	INSM1 (ENSVURG00010005820) #22	RALGAPA2 (ENSVURG00010005756) #23	ENSVURG00010005678	KIZ (ENSVURG00010005599) #24	XRN2 (ENSVURG00010005531) #25	NKX2-4 (ENSVURG00010005513) #26	NKX2-2 (ENSVURG00010005501) #27	PAX1 (ENSVURG00010005488) #28	FOXA2 (ENSVURG00010005464) #29	SSTR4 (ENSVURG00010005456) #30	THBD (ENSVURG00010005445) #31	CD93 (ENSVURG00010005436) #32
koala	MODERN SPECIES	1	KAT14 (ENSPCIG00000000838) #7	DZANK1 (ENSPCIG00000000872) #10	POLR3F (ENSPCIG00000000908) #11	RBBP9 (ENSPCIG00000000922) #12	SEC23B (ENSPCIG00000000942) #13	ENSPCIG00000036206	DTD1 (ENSPCIG00000000993) #14	ENSPCIG00000001009	SCP2D1 (ENSPCIG00000019128) #15	SLC24A3 (ENSPCIG00000018234) #16	RIN2 (ENSPCIG00000020994) #18	NAA20 (ENSPCIG00000025955) #19	CRNKL1 (ENSPCIG00000025825) #20	CFAP61 (ENSPCIG00000025813) #21	ENSPCIG00000034193	INSM1 (ENSPCIG00000025810) #22	ENSPCIG00000008868 #23	ENSPCIG00000001346 #23	XRN2 (ENSPCIG00000001237) #25	NKX2-4 (ENSPCIG00000024538) #26	ENSPCIG00000031596	NKX2-2 (ENSPCIG00000034162) #27	PAX1 (ENSPCIG00000031385) #28	FOXA2 (ENSPCIG00000025918) #29	SSTR4 (ENSPCIG00000015498) #30	ENSPCIG00000015494	CD93 (ENSPCIG00000015492) #32	ENSPCIG00000013801	ENSPCIG00000013803 #34	ENSPCIG00000031294 #34	NAPB (ENSPCIG00000013805) #35
Opossum	MODERN SPECIES		PET117 (ENSMODG00000048522)	KAT14 (ENSMODG00000005543) #7	ENSMODG00000048005	DZANK1 (ENSMODG00000005606) #10	ENSMODG00000005624 #11	RBBP9 (ENSMODG00000005642) #12	SEC23B (ENSMODG00000005687) #13	DTD1 (ENSMODG00000005696) #14	ENSMODG00000042009	SLC24A3 (ENSMODG00000005890) #16	RIN2 (ENSMODG00000005916) #18	ENSMODG00000028620	NAA20 (ENSMODG00000005931) #19	ENSMODG00000005961 #20	CFAP61 (ENSMODG00000005981) #21	INSM1 (ENSMODG00000006031) #22	ENSMODG00000043419 #23	ENSMODG00000050875	ENSMODG00000036552	ENSMODG00000006089 #23	KIZ (ENSMODG00000006125) #24	ENSMODG00000040034	XRN2 (ENSMODG00000006163) #25	NKX2-4 (ENSMODG00000006170) #26	NKX2-2 (ENSMODG00000006177) #27	PAX1 (ENSMODG00000006198) #28	FOXA2 (ENSMODG00000006213) #29	SSTR4 (ENSMODG00000023138) #30	ENSMODG00000023139 #31	CD93 (ENSMODG00000006221) #32	ENSMODG00000044175 #34
Platypus	MODERN SPECIES		ENSOANG00000005451	ENSOANG00000019728	SLC19A3 (ENSOANG00000001882)	ENSOANG00000021949	MTLN (ENSOANG00000050517)	ENSOANG00000020618	SEC23B (ENSOANG00000008750) #13	ENSOANG00000039827	DTD1 (ENSOANG00000038993) #14	SCP2D1 (ENSOANG00000003673) #15	SLC24A3 (ENSOANG00000015699) #16	RIN2 (ENSOANG00000002281) #18	NAA20 (ENSOANG00000036301) #19	CRNKL1 (ENSOANG00000031667) #20	CFAP61 (ENSOANG00000046492) #21	INSM1 (ENSOANG00000038669) #22	RALGAPA2 (ENSOANG00000002499) #23	ENSOANG00000002851 #24	XRN2 (ENSOANG00000015673) #25	NKX2-4 (ENSOANG00000048651) #26	ENSOANG00000047729 #27	PAX1 (ENSOANG00000002008) #28	FOXA2 (ENSOANG00000015108) #29	SSTR4 (ENSOANG00000037977) #30	ENSOANG00000015171	ENSOANG00000041257 #32	ENSOANG00000022376 #34	GZF1 (ENSOANG00000038746) #34	ENSOANG00000045902	NAPB (ENSOANG00000000251) #35	ENSOANG00000051113
Sauria	ANCESTRAL SPECIES	1	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00440000033970	ENSGT00390000014969
Lepidosauria	ANCESTRAL SPECIES	123						ENSGT00950000183147.B	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247.b #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156996 #32
tuatara	MODERN SPECIES	1774													NAA20 (ENSSPUG00000005245) #19	CRNKL1 (ENSSPUG00000005254) #20	CFAP61 (ENSSPUG00000005289) #21	INSM1 (ENSSPUG00000005332) #22	ENSSPUG00000005359 #23	ENSSPUG00000005371	ENSSPUG00000005379 #23	ENSSPUG00000005392	ENSSPUG00000005413 #23	ENSSPUG00000005462	ENSSPUG00000005471 #24	ENSSPUG00000005474 #24	XRN2 (ENSSPUG00000005485) #25	NKX2-4 (ENSSPUG00000005535) #26	NKX2-2 (ENSSPUG00000005539) #27	PAX1 (ENSSPUG00000005561) #28
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00440000033970	ENSGT00390000014969
Archosauria	ANCESTRAL SPECIES	45	ENSGT00520000059926	ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396
Aves	ANCESTRAL SPECIES	56										ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Neognathae	ANCESTRAL SPECIES	32										ENSGT00550000075046 #19	ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Galloanserae	ANCESTRAL SPECIES	29												ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Phasianidae	ANCESTRAL SPECIES	29	ENSGT00940000164764	ENSGT00940000153244.A	ENSGT00940000153954.d	ENSGT00950000183209.b.a.a	ENSGT00390000003866.a.a	ENSGT00530000064165.b	ENSGT00940000157952	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Japanese quail	MODERN SPECIES	21	ENSCJPG00005015284	MRPL2 (ENSCJPG00005015441)	ENSCJPG00005015443	ENSCJPG00005015447	ENSCJPG00005015448	KLHDC3 (ENSCJPG00005015449)	ENSCJPG00005015450	PPP2R5D (ENSCJPG00005015454)	MEA1 (ENSCJPG00005015586)	ABHD12 (ENSCJPG00005015587)	PYGB (ENSCJPG00005015588)	RIN2 (ENSCJPG00005015589) #18	SLC24A3 (ENSCJPG00005015590) #16	CRNKL1 (ENSCJPG00005015591) #20	CFAP61 (ENSCJPG00005015592) #21	INSM1 (ENSCJPG00005015593) #22	RALGAPA2 (ENSCJPG00005015594) #23	KIZ (ENSCJPG00005015757) #24	XRN2 (ENSCJPG00005015783) #25	NKX2-4 (ENSCJPG00005015785) #26	ENSCJPG00005015788 #27	FOXA2 (ENSCJPG00005015793) #29	SSTR4 (ENSCJPG00005015795) #30	ENSCJPG00005015797	CD93 (ENSCJPG00005015799) #32	ENSCJPG00005015825 #34	GZF1 (ENSCJPG00005015826) #34	NAPB (ENSCJPG00005015828) #35	ZC3H6 (ENSCJPG00005015830)	FBLN7 (ENSCJPG00005015831)	MERTK (ENSCJPG00005015833)
Phasianidae_b	ANCESTRAL SPECIES	28	ENSGT00940000164764	ENSGT00940000153244.A	ENSGT00940000153954.d	ENSGT00950000183209.b.a.a	ENSGT00390000003866.a.a	ENSGT00530000064165.b	ENSGT00940000157952	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Chicken	MODERN SPECIES	22	ENSGALG00010018566	ENSGALG00010018560	MRPL2 (ENSGALG00010018556)	ENSGALG00010018520	ENSGALG00010018509	ENSGALG00010018492	ENSGALG00010018476	KLHDC3 (ENSGALG00010018448)	MEA1 (ENSGALG00010018440)	PPP2R5D (ENSGALG00010018428)	ABHD12 (ENSGALG00010018399)	PYGB (ENSGALG00010018376)	RIN2 (ENSGALG00010018351) #18	SLC24A3 (ENSGALG00010018314) #16	CRNKL1 (ENSGALG00010018288) #20	INSM1 (ENSGALG00010018279) #22	CFAP61 (ENSGALG00010018264) #21	RALGAPA2 (ENSGALG00010018241) #23	KIZ (ENSGALG00010018206) #24	XRN2 (ENSGALG00010018148) #25	NKX2-4 (ENSGALG00010018125) #26	NKX2-2 (ENSGALG00010018111) #27	PAX1 (ENSGALG00010018083) #28	FOXA2 (ENSGALG00010018076) #29	ENSGALG00010018067	SSTR4 (ENSGALG00010018057) #30	CD248 (ENSGALG00010019399) #32	GZF1 (ENSGALG00010018037) #34	ENSGALG00010018028	NAPB (ENSGALG00010018019) #35	ZC3H8 (ENSGALG00010018002)
Anatidae	ANCESTRAL SPECIES	45												ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000155669
Pink-footed goose	MODERN SPECIES	117												RIN2 (ENSABRG00000006510) #18	SLC24A3 (ENSABRG00000006519) #16	CRNKL1 (ENSABRG00000006550) #20	CFAP61 (ENSABRG00000006636) #21	INSM1 (ENSABRG00000006785) #22	RALGAPA2 (ENSABRG00000007031) #23	ENSABRG00000011461 #24	XRN2 (ENSABRG00000011465) #25	NKX2-4 (ENSABRG00000011475) #26	NKX2-2 (ENSABRG00000011480) #27	PAX1 (ENSABRG00000011485) #28	FOXA2 (ENSABRG00000011501) #29	SSTR4 (ENSABRG00000011516) #30	ENSABRG00000011520	CD93 (ENSABRG00000011523) #32	GZF1 (ENSABRG00000011534) #34	NAPB (ENSABRG00000011550) #35	ZC3H6 (ENSABRG00000011566)	FBLN7 (ENSABRG00000011583)	MERTK (ENSABRG00000011592)
Neognathae_b	ANCESTRAL SPECIES	32										ENSGT00550000075046 #19	ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a
Passeriformes	ANCESTRAL SPECIES	31												ENSGT00940000154866.B #18	ENSGT01030000234532.A.a.a.b #16	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000156819.a.a #30	ENSGT00940000166261	ENSGT00940000156996 #32	ENSGT00870000136554 #34	ENSGT00390000005826.a.b #35	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000155669
Great tit	MODERN SPECIES	22										ENSPMJG00000013501	KCNK16 (ENSPMJG00000013502)	RIN2 (ENSPMJG00000013504) #18	SLC24A3 (ENSPMJG00000013508) #16	CRNKL1 (ENSPMJG00000013532) #20	CFAP61 (ENSPMJG00000013533) #21	INSM1 (ENSPMJG00000013534) #22	RALGAPA2 (ENSPMJG00000013536) #23	XRN2 (ENSPMJG00000013729) #25	ENSPMJG00000013730	PAX1 (ENSPMJG00000013744) #28	FOXA2 (ENSPMJG00000013745) #29	SSTR4 (ENSPMJG00000013747) #30	ENSPMJG00000013748	CD93 (ENSPMJG00000013751) #32	ENSPMJG00000013755 #34	GZF1 (ENSPMJG00000013756) #34	NAPB (ENSPMJG00000013758) #35	ENSPMJG00000013842	ZC3H6 (ENSPMJG00000013843)	ENSPMJG00000013844	MERTK (ENSPMJG00000013845)
Cryptodira	ANCESTRAL SPECIES	44	ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000161444	ENSGT00390000007701	ENSGT00390000007551	ENSGT00940000162755	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483	ENSGT00940000155423
Testudinoidea	ANCESTRAL SPECIES		ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000161444	ENSGT00390000007701	ENSGT00390000007551	ENSGT00940000162755	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483	ENSGT00940000155423
Emydidae	ANCESTRAL SPECIES	41	ENSGT00940000159359	ENSGT00960000189392	ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT00390000004987 #21	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00400000024959	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000161444	ENSGT00390000007701	ENSGT00390000007551	ENSGT00940000162755	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483	ENSGT00940000155423
Three-toed box turtle	MODERN SPECIES	62	OVOL2 (ENSTMTG00000014204)	ENSTMTG00000014188	ENSTMTG00000014174	KAT14 (ENSTMTG00000014155) #7	BIRC5 (ENSTMTG00000014090)	DZANK1 (ENSTMTG00000013988) #10	POLR3F (ENSTMTG00000013956) #11	RBBP9 (ENSTMTG00000013948) #12	SEC23B (ENSTMTG00000013927) #13	SCP2D1 (ENSTMTG00000013925) #15	SLC24A3 (ENSTMTG00000013883) #16	RIN2 (ENSTMTG00000013852) #18	NAA20 (ENSTMTG00000013839) #19	CRNKL1 (ENSTMTG00000013822) #20	CFAP61 (ENSTMTG00000013481) #21	INSM1 (ENSTMTG00000013443) #22	RALGAPA2 (ENSTMTG00000013368) #23	ENSTMTG00000013351	KIZ (ENSTMTG00000013304) #24	XRN2 (ENSTMTG00000013258) #25	NKX2-4 (ENSTMTG00000013245) #26	NKX2-2 (ENSTMTG00000013238) #27	PAX1 (ENSTMTG00000013220) #28	FOXA2 (ENSTMTG00000013199) #29	MALL (ENSTMTG00000013173)	NPHP1 (ENSTMTG00000013032)	ENSTMTG00000013008	MTLN (ENSTMTG00000012999)	ENSTMTG00000012974	TMEM178A (ENSTMTG00000012943)	MAP4K3 (ENSTMTG00000012813)
painted turtle	MODERN SPECIES	12	SNX5 (ENSCPBG00000023448)	MGME1 (ENSCPBG00000023450)	OVOL2 (ENSCPBG00000023454)	KAT14 (ENSCPBG00000023466) #7	BIRC5 (ENSCPBG00000023468)	DZANK1 (ENSCPBG00000023469) #10	POLR3F (ENSCPBG00000023473) #11	RBBP9 (ENSCPBG00000023475) #12	SEC23B (ENSCPBG00000023477) #13	DTD1 (ENSCPBG00000023483) #14	SCP2D1 (ENSCPBG00000023485) #15	RIN2 (ENSCPBG00000023491) #18	NAA20 (ENSCPBG00000023498) #19	CRNKL1 (ENSCPBG00000023501) #20	CFAP61 (ENSCPBG00000023506) #21	INSM1 (ENSCPBG00000023510) #22	RALGAPA2 (ENSCPBG00000023514) #23	ENSCPBG00000023521	KIZ (ENSCPBG00000023528) #24	XRN2 (ENSCPBG00000023533) #25	NKX2-4 (ENSCPBG00000023539) #26	NKX2-2 (ENSCPBG00000023541) #27	PAX1 (ENSCPBG00000023543) #28	FOXA2 (ENSCPBG00000023545) #29	MALL (ENSCPBG00000023547)	NPHP1 (ENSCPBG00000023552)	MTLN (ENSCPBG00000023558)	ENSCPBG00000023559	TMEM178A (ENSCPBG00000023565)	MAP4K3 (ENSCPBG00000023569)	SOS1 (ENSCPBG00000023579)
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00390000001146 #7	ENSGT00510000047537	ENSGT00390000000549 #10	ENSGT00390000009679 #11	ENSGT00390000014861 #12	ENSGT00390000006916.c #13	ENSGT00940000153431.b #14	ENSGT00940000154327.b.e.b #15	ENSGT01030000234532.A.a.a.b #16	ENSGT00940000154866.B #18	ENSGT00550000075046 #19	ENSGT00550000074931 #20	ENSGT01000000215777	ENSGT00390000004987 #21	ENSGT00940000167996	ENSGT00940000162552 #22	ENSGT00950000183139.A #23	ENSGT00390000010121 #24	ENSGT00670000098098 #25	ENSGT00940000162247 #26	ENSGT00940000159727 #27	ENSGT00940000159137 #28	ENSGT00940000155999 #29	ENSGT00940000161444	ENSGT00390000007701	ENSGT00390000007551	ENSGT00940000162755	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483.g	ENSGT00940000155423	ENSGT00940000162759
Abingdon island giant tortoise	MODERN SPECIES	1558															ENSCABG00000020514	INSM1 (ENSCABG00000020513) #22	ENSCABG00000020512	RALGAPA2 (ENSCABG00000020498) #23	ENSCABG00000020497 #24	XRN2 (ENSCABG00000020495) #25	NKX2-4 (ENSCABG00000020494) #26	NKX2-2 (ENSCABG00000020493) #27	PAX1 (ENSCABG00000020492) #28	FOXA2 (ENSCABG00000020491) #29	MALL (ENSCABG00000020487)	NPHP1 (ENSCABG00000020484)	MTLN (ENSCABG00000020482)	ENSCABG00000020480	TMEM178A (ENSCABG00000020479)	ENSCABG00000020476	ENSCABG00000020469
Goode s thornscrub tortoise	MODERN SPECIES	17	KAT14 (ENSGEVG00005016139) #7	BIRC5 (ENSGEVG00005016248)	DZANK1 (ENSGEVG00005016298) #10	POLR3F (ENSGEVG00005016411) #11	RBBP9 (ENSGEVG00005016438) #12	SEC23B (ENSGEVG00005016472) #13	DTD1 (ENSGEVG00005016506) #14	SCP2D1 (ENSGEVG00005016532) #15	SLC24A3 (ENSGEVG00005016547) #16	RIN2 (ENSGEVG00005016686) #18	NAA20 (ENSGEVG00005016744) #19	CRNKL1 (ENSGEVG00005016766) #20	ENSGEVG00005016799	CFAP61 (ENSGEVG00005016813) #21	ENSGEVG00005016856	INSM1 (ENSGEVG00005016876) #22	RALGAPA2 (ENSGEVG00005016920) #23	KIZ (ENSGEVG00005017056) #24	XRN2 (ENSGEVG00005017099) #25	NKX2-4 (ENSGEVG00005017157) #26	NKX2-2 (ENSGEVG00005017179) #27	PAX1 (ENSGEVG00005017194) #28	FOXA2 (ENSGEVG00005017225) #29	MALL (ENSGEVG00005017245)	NPHP1 (ENSGEVG00005017269)	MTLN (ENSGEVG00005017304)	ENSGEVG00005017333	TMEM178A (ENSGEVG00005017432)	MAP4K3 (ENSGEVG00005017502)	SOS1 (ENSGEVG00005017656)	ARHGEF33 (ENSGEVG00005017726)