Bovidae	ANCESTRAL SPECIES	20	ENSGT00940000169193	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00950000183254	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00900000143426 #24	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00940000162599	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT00730000111477
Caprinae	ANCESTRAL SPECIES	22	ENSGT00390000002237 #8	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00950000183254	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00900000143426 #24	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00940000162599	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT00940000158296
Rambouillet Sheep	MODERN SPECIES	9	GPR68 (ENSOARG00020011709) #7	DGLUCY (ENSOARG00020011574) #8	FRMD5 (ENSOARG00020010914) #9	WDR76 (ENSOARG00020010574) #10	MFAP1 (ENSOARG00020010495) #11	HYPK (ENSOARG00020010442) #12	SERINC4 (ENSOARG00020010035) #13	ENSOARG00020009854 #14	ELL3 (ENSOARG00020009785) #15	PDIA3 (ENSOARG00020009659) #16	CATSPER2 (ENSOARG00020009538) #17	STRC (ENSOARG00020009359) #18	ENSOARG00020009302 #19	PPIP5K1 (ENSOARG00020008782) #20	MAP1A (ENSOARG00020008724) #21	TP53BP1 (ENSOARG00020008490) #22	TUBGCP4 (ENSOARG00020008164) #23	ENSOARG00020008109 #24	ZSCAN29 (ENSOARG00020008048) #25	ADAL (ENSOARG00020007792) #26	ENSOARG00020007742 #27	TGM7 (ENSOARG00020007680) #28	TGM5 (ENSOARG00020007474) #29	ENSOARG00020007227 #30	ENSOARG00020007130 #31	ENSOARG00020007061 #32	PRPF39 (ENSOARG00020006969) #33	TOGARAM1 (ENSOARG00020006719) #34	KLHL28 (ENSOARG00020006637) #35	C14orf28 (ENSOARG00020006502) #36	ENSOARG00020006348 #37
Goat	MODERN SPECIES	13	FRMD5 (ENSCHIG00000026506) #9	ENSCHIG00000017483	WDR76 (ENSCHIG00000012212) #10	MFAP1 (ENSCHIG00000013829) #11	HYPK (ENSCHIG00000007815) #12	SERINC4 (ENSCHIG00000020878) #13	SERF2 (ENSCHIG00000016434)	ELL3 (ENSCHIG00000015271) #15	PDIA3 (ENSCHIG00000024672) #16	CATSPER2 (ENSCHIG00000017322) #17	STRC (ENSCHIG00000022061) #18	ENSCHIG00000018489 #19	ENSCHIG00000014087	PPIP5K1 (ENSCHIG00000007418) #20	MAP1A (ENSCHIG00000016473) #21	TP53BP1 (ENSCHIG00000010194) #22	TUBGCP4 (ENSCHIG00000015668) #23	ZSCAN29 (ENSCHIG00000020973) #25	ADAL (ENSCHIG00000004934) #26	LCMT2 (ENSCHIG00000004003)	TGM7 (ENSCHIG00000018370) #28	TGM5 (ENSCHIG00000015160) #29	MIS18BP1 (ENSCHIG00000023697)	FANCM (ENSCHIG00000015176) #30	FKBP3 (ENSCHIG00000018893) #32	PRPF39 (ENSCHIG00000010118) #33	TOGARAM1 (ENSCHIG00000015767) #34	KLHL28 (ENSCHIG00000023507) #35	C14orf28 (ENSCHIG00000008954) #36	ENSCHIG00000012257	ENSCHIG00000017232
Bovinae	ANCESTRAL SPECIES	19	ENSGT00940000169193	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00950000183254	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00900000143426 #24	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00940000162599	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT00730000111477
Bos	ANCESTRAL SPECIES	18	ENSGT00940000169193	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00950000183254	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00900000143426 #24	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00940000162599	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT00730000111477
Bos_a	ANCESTRAL SPECIES	10	ENSGT00940000169193	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00950000183254	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00900000143426 #24	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00970000197113 #27	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT00730000111477
Wild yak	MODERN SPECIES	499	FRMD5 (ENSBMUG00000020708) #9	WDR76 (ENSBMUG00000020622) #10	MFAP1 (ENSBMUG00000020605) #11	HYPK (ENSBMUG00000020591) #12	SERINC4 (ENSBMUG00000020582) #13	ENSBMUG00000020556 #14	ELL3 (ENSBMUG00000020545) #15	PDIA3 (ENSBMUG00000020521) #16	ENSBMUG00000020513 #17	ENSBMUG00000020503 #17	STRC (ENSBMUG00000020489) #18	ENSBMUG00000020471 #19	ENSBMUG00000020451	PPIP5K1 (ENSBMUG00000020411) #20	MAP1A (ENSBMUG00000020290) #21	TP53BP1 (ENSBMUG00000020213) #22	TUBGCP4 (ENSBMUG00000020133) #23	ENSBMUG00000020113 #24	ZSCAN29 (ENSBMUG00000020104) #25	ADAL (ENSBMUG00000020057) #26	ENSBMUG00000020037 #27	TGM7 (ENSBMUG00000020022) #28	TGM5 (ENSBMUG00000020000) #29	MIS18BP1 (ENSBMUG00000019945)	FANCM (ENSBMUG00000019916) #30	FKBP3 (ENSBMUG00000019888) #32	PRPF39 (ENSBMUG00000019878) #33	TOGARAM1 (ENSBMUG00000019822) #34	KLHL28 (ENSBMUG00000019751) #35	C14orf28 (ENSBMUG00000019737) #36	ENSBMUG00000019713
Domestic yak	MODERN SPECIES	8	DGLUCY (ENSBGRG00000014639) #8	FRMD5 (ENSBGRG00000014015) #9	WDR76 (ENSBGRG00000013717) #10	MFAP1 (ENSBGRG00000013656) #11	HYPK (ENSBGRG00000013604) #12	SERINC4 (ENSBGRG00000013278) #13	ENSBGRG00000013122 #14	ELL3 (ENSBGRG00000012975) #15	PDIA3 (ENSBGRG00000012583) #16	CATSPER2 (ENSBGRG00000012305) #17	STRC (ENSBGRG00000011966) #18	ENSBGRG00000011804 #19	PPIP5K1 (ENSBGRG00000010551) #20	MAP1A (ENSBGRG00000010433) #21	ENSBGRG00000010389	TP53BP1 (ENSBGRG00000010090) #22	TUBGCP4 (ENSBGRG00000009788) #23	ENSBGRG00000009739 #24	ZSCAN29 (ENSBGRG00000009662) #25	ADAL (ENSBGRG00000009499) #26	ENSBGRG00000009447 #27	TGM7 (ENSBGRG00000009342) #28	TGM5 (ENSBGRG00000009069) #29	MIS18BP1 (ENSBGRG00000008879)	FANCM (ENSBGRG00000008250) #30	FKBP3 (ENSBGRG00000008123) #32	PRPF39 (ENSBGRG00000007961) #33	TOGARAM1 (ENSBGRG00000007492) #34	KLHL28 (ENSBGRG00000007451) #35	C14orf28 (ENSBGRG00000007396) #36	ENSBGRG00000007337
Bos_b	ANCESTRAL SPECIES	18	ENSGT00950000183136.a.a #7	ENSGT00940000169193	ENSGT00940000156346 #9	ENSGT00510000048144 #10	ENSGT00690000102225 #11	ENSGT00390000008502 #12	ENSGT01030000234623.a.b.b #13	ENSGT00910000144347.b #14	ENSGT00940000161615 #15	ENSGT00940000155425 #16	ENSGT00910000144338 #17	ENSGT00950000182957.a.a.b #18	ENSGT00950000182772.B.a.b #19	ENSGT00390000009048.a.a #20	ENSGT00940000158701 #21	ENSGT00390000011891 #22	ENSGT00940000156677 #23	ENSGT00940000161523 #25	ENSGT00950000183113.b.a #26	ENSGT00940000162599	ENSGT01050000244866.A.a.b.b #28	ENSGT01050000244866.A.a.b.a #29	ENSGT00390000007395	ENSGT00940000156480 #30	ENSGT00940000154514 #32	ENSGT00390000005033 #33	ENSGT00940000158712 #34	ENSGT00940000158586 #35	ENSGT00390000012377 #36	ENSGT01000000214694.A.a.b	ENSGT00530000063085.A.b.h
Hybrid Bos Indicus	MODERN SPECIES	13	MFAP1 (ENSBIXG00005003496) #11	HYPK (ENSBIXG00005020714) #12	SERINC4 (ENSBIXG00005020795) #13	ENSBIXG00005020847 #14	ENSBIXG00005020851	ELL3 (ENSBIXG00005020863) #15	PDIA3 (ENSBIXG00005020936) #16	ENSBIXG00005020986 #17	ENSBIXG00005021004 #17	STRC (ENSBIXG00005003564) #18	ENSBIXG00005021187 #19	PPIP5K1 (ENSBIXG00005021355) #20	MAP1A (ENSBIXG00005006603) #21	ENSBIXG00005021468	ENSBIXG00005021480	TP53BP1 (ENSBIXG00005003683) #22	TUBGCP4 (ENSBIXG00005021952) #23	ZSCAN29 (ENSBIXG00005003716) #25	ADAL (ENSBIXG00005003738) #26	ENSBIXG00005022081 #27	TGM7 (ENSBIXG00005007684) #28	TGM5 (ENSBIXG00005022351) #29	MIS18BP1 (ENSBIXG00005022453)	FANCM (ENSBIXG00005003848) #30	FKBP3 (ENSBIXG00005022615) #32	PRPF39 (ENSBIXG00005003875) #33	TOGARAM1 (ENSBIXG00005006670) #34	KLHL28 (ENSBIXG00005022884) #35	C14orf28 (ENSBIXG00005003913) #36	ENSBIXG00005006165	ENSBIXG00005003918
Cow	MODERN SPECIES	13	GPR68 (ENSBTAG00000006738) #7	ENSBTAG00000050803	FRMD5 (ENSBTAG00000017216) #9	WDR76 (ENSBTAG00000017215) #10	MFAP1 (ENSBTAG00000017213) #11	HYPK (ENSBTAG00000017212) #12	SERF2 (ENSBTAG00000047694) #14	SERINC4 (ENSBTAG00000017211) #13	ELL3 (ENSBTAG00000032132) #15	PDIA3 (ENSBTAG00000017196) #16	CATSPER2 (ENSBTAG00000032130) #17	STRC (ENSBTAG00000007503) #18	CKMT1A (ENSBTAG00000007502) #19	PPIP5K1 (ENSBTAG00000014005) #20	MAP1A (ENSBTAG00000014001) #21	TP53BP1 (ENSBTAG00000021304) #22	TUBGCP4 (ENSBTAG00000014479) #23	ZSCAN29 (ENSBTAG00000014478) #25	ADAL (ENSBTAG00000014476) #26	LCMT2 (ENSBTAG00000014472)	TGM7 (ENSBTAG00000015412) #28	TGM5 (ENSBTAG00000032059) #29	MIS18BP1 (ENSBTAG00000002613)	FANCM (ENSBTAG00000002612) #30	FKBP3 (ENSBTAG00000002610) #32	PRPF39 (ENSBTAG00000002603) #33	TOGARAM1 (ENSBTAG00000039117) #34	KLHL28 (ENSBTAG00000020042) #35	C21H14orf28 (ENSBTAG00000016062) #36	ENSBTAG00000052854	FSCB (ENSBTAG00000031934)
American bison	MODERN SPECIES	2995	ENSBBBG00000009869	FRMD5 (ENSBBBG00000009894) #9	WDR76 (ENSBBBG00000009914) #10	MFAP1 (ENSBBBG00000009922) #11	HYPK (ENSBBBG00000009932) #12	SERINC4 (ENSBBBG00000001662) #13	ENSBBBG00000007160 #14	ELL3 (ENSBBBG00000009951) #15	PDIA3 (ENSBBBG00000008276) #16	ENSBBBG00000009961 #17	STRC (ENSBBBG00000009976) #18	ENSBBBG00000009994 #19	ENSBBBG00000009999	PPIP5K1 (ENSBBBG00000010069) #20	MAP1A (ENSBBBG00000010096) #21	TP53BP1 (ENSBBBG00000007206) #22	TUBGCP4 (ENSBBBG00000001730) #23	ZSCAN29 (ENSBBBG00000010223) #25	ADAL (ENSBBBG00000010250) #26	ENSBBBG00000010254 #27	TGM7 (ENSBBBG00000000134) #28	TGM5 (ENSBBBG00000000107) #29	MIS18BP1 (ENSBBBG00000000076)	FANCM (ENSBBBG00000010273) #30	FKBP3 (ENSBBBG00000001759) #32	PRPF39 (ENSBBBG00000001768) #33	TOGARAM1 (ENSBBBG00000010314) #34	KLHL28 (ENSBBBG00000010324) #35	C14orf28 (ENSBBBG00000007490) #36	ENSBBBG00000010339	ENSBBBG00000001793