Bilateria	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Chordata	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Gnathostomata	ANCESTRAL SPECIES	286																ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Euteleostomi	ANCESTRAL SPECIES	12	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01040000240375.D	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00940000166281	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Sarcopterygii	ANCESTRAL SPECIES	11	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01040000240375.D	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00940000166281	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Tetrapoda	ANCESTRAL SPECIES		ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01040000240375.D	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Amniota	ANCESTRAL SPECIES		ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Mammalia	ANCESTRAL SPECIES		ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Theria	ANCESTRAL SPECIES	1	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Eutheria	ANCESTRAL SPECIES	17	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.C ##25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Primates	ANCESTRAL SPECIES	26	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Haplorrhini	ANCESTRAL SPECIES	28	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Hominoidea	ANCESTRAL SPECIES	21	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907
Hominidae	ANCESTRAL SPECIES	23	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907
Gorilla	MODERN SPECIES	4	TRPC4 (ENSGGOG00000007142) #7	ENSGGOG00000026214 #8	ENSGGOG00000023208 #9	STOML3 (ENSGGOG00000011813) #10	PROSER1 (ENSGGOG00000003830) #11	ENSGGOG00000043703 #12	ENSGGOG00000022722 #13	LHFPL6 (ENSGGOG00000011641) #14	COG6 (ENSGGOG00000034837) #15	ENSGGOG00000040044 #16	FOXO1 (ENSGGOG00000008104) #17	ENSGGOG00000037880 #18	MRPS31 (ENSGGOG00000006468) #19	SLC25A15 (ENSGGOG00000025261) #20	ELF1 (ENSGGOG00000010760) #21	WBP4 (ENSGGOG00000026935) #22	KBTBD6 (ENSGGOG00000028568) #23	ENSGGOG00000044180 #24	KBTBD7 (ENSGGOG00000008962) #25	MTRF1 (ENSGGOG00000002529) #26	ENSGGOG00000015823 #27	ENSGGOG00000043860 #28	ENSGGOG00000023196 #29	ENSGGOG00000042092 #30	RGCC (ENSGGOG00000002722) #31	VWA8 (ENSGGOG00000009902) #32	DGKH (ENSGGOG00000000410) #33	AKAP11 (ENSGGOG00000013285) #34	TNFSF11 (ENSGGOG00000011190) #35	FAM216B (ENSGGOG00000042846) #36	ENSGGOG00000000804 #37
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907
Human	MODERN SPECIES	4	SUPT20H (ENSG00000102710)	CSNK1A1L (ENSG00000180138)	POSTN (ENSG00000133110)	TRPC4 (ENSG00000133107) #7	UFM1 (ENSG00000120686) ##8	FREM2 (ENSG00000150893)	STOML3 (ENSG00000133115) #10	PROSER1 (ENSG00000120685) #11	NHLRC3 (ENSG00000188811)	LHFPL6 (ENSG00000183722) #14	COG6 (ENSG00000133103) #15	FOXO1 (ENSG00000150907) #17	MRPS31 (ENSG00000102738) #19	SLC25A15 (ENSG00000102743) #20	ELF1 (ENSG00000120690) #21	WBP4 (ENSG00000120688) #22	KBTBD6 (ENSG00000165572) #23	KBTBD7 (ENSG00000120696) #25	MTRF1 (ENSG00000120662) #26	NAA16 (ENSG00000172766) #29	RGCC (ENSG00000102760) #31	VWA8 (ENSG00000102763) #32	DGKH (ENSG00000102780) #33	AKAP11 (ENSG00000023516) #34	TNFSF11 (ENSG00000120659) #35	FAM216B (ENSG00000179813) #36	EPSTI1 (ENSG00000133106) #37	DNAJC15 (ENSG00000120675)	ENOX1 (ENSG00000120658)	CCDC122 (ENSG00000151773)	LACC1 (ENSG00000179630)
Pan	ANCESTRAL SPECIES	22	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907
Chimpanzee	MODERN SPECIES	4	TRPC4 (ENSPTRG00000005795) #7	UFM1 (ENSPTRG00000043532) #8	ENSPTRG00000050237 #9	FREM2 (ENSPTRG00000005800)	STOML3 (ENSPTRG00000005801) #10	PROSER1 (ENSPTRG00000005802) #11	NHLRC3 (ENSPTRG00000048931)	LHFPL6 (ENSPTRG00000005804) #14	COG6 (ENSPTRG00000005805) #15	ENSPTRG00000044132 #16	FOXO1 (ENSPTRG00000005806) #17	ENSPTRG00000044978 #18	MRPS31 (ENSPTRG00000005808) #19	SLC25A15 (ENSPTRG00000044827) #20	ELF1 (ENSPTRG00000005811) #21	WBP4 (ENSPTRG00000005812) #22	KBTBD6 (ENSPTRG00000044355) #23	ENSPTRG00000050292	KBTBD7 (ENSPTRG00000045760) #25	MTRF1 (ENSPTRG00000005815) #26	NAA16 (ENSPTRG00000005816) #29	ENSPTRG00000048809 #30	RGCC (ENSPTRG00000005819) #31	VWA8 (ENSPTRG00000005820) #32	DGKH (ENSPTRG00000005823) #33	ENSPTRG00000042691	AKAP11 (ENSPTRG00000005824) #34	ENSPTRG00000050423	TNFSF11 (ENSPTRG00000005827) #35	FAM216B (ENSPTRG00000050984) #36	EPSTI1 (ENSPTRG00000045006) #37
Bonobo	MODERN SPECIES	4	ENSPPAG00000032590 #9	FREM2 (ENSPPAG00000033536)	STOML3 (ENSPPAG00000036339) #10	PROSER1 (ENSPPAG00000041489) #11	NHLRC3 (ENSPPAG00000035417)	LHFPL6 (ENSPPAG00000037607) #14	ENSPPAG00000037842	COG6 (ENSPPAG00000038745) #15	ENSPPAG00000030477 #16	ENSPPAG00000030762	ENSPPAG00000031131 #18	MRPS31 (ENSPPAG00000031430) #19	SLC25A15 (ENSPPAG00000031947) #20	ENSPPAG00000032364	ELF1 (ENSPPAG00000032943) #21	WBP4 (ENSPPAG00000034971) #22	KBTBD6 (ENSPPAG00000005767) #23	ENSPPAG00000010953	KBTBD7 (ENSPPAG00000033088) #25	MTRF1 (ENSPPAG00000000050) #26	NAA16 (ENSPPAG00000027330) #29	ENSPPAG00000019737 #30	RGCC (ENSPPAG00000034498) #31	VWA8 (ENSPPAG00000004808) #32	ENSPPAG00000027262	ENSPPAG00000036752	LRCH1 (ENSPPAG00000041174)	ESD (ENSPPAG00000029798)	HTR2A (ENSPPAG00000000160)	ENSPPAG00000035492	ENSPPAG00000039901
Orangutan	MODERN SPECIES	4	CSNK1A1L (ENSPPYG00000005290)	POSTN (ENSPPYG00000005291)	TRPC4 (ENSPPYG00000005292) #7	UFM1 (ENSPPYG00000040474) #8	FREM2 (ENSPPYG00000005296)	STOML3 (ENSPPYG00000005297) #10	PROSER1 (ENSPPYG00000005298) #11	NHLRC3 (ENSPPYG00000005299)	LHFPL6 (ENSPPYG00000005300) #14	COG6 (ENSPPYG00000005301) #15	ENSPPYG00000005302 #16	FOXO1 (ENSPPYG00000005304) #17	MRPS31 (ENSPPYG00000005306) #19	SLC25A15 (ENSPPYG00000005307) #20	ELF1 (ENSPPYG00000005309) #21	WBP4 (ENSPPYG00000005310) #22	KBTBD6 (ENSPPYG00000037658) #23	KBTBD7 (ENSPPYG00000032922) #25	MTRF1 (ENSPPYG00000005313) #26	NAA16 (ENSPPYG00000005314) #29	RGCC (ENSPPYG00000005316) #31	VWA8 (ENSPPYG00000005317) #32	DGKH (ENSPPYG00000005318) #33	AKAP11 (ENSPPYG00000005319) #34	ENSPPYG00000034024	TNFSF11 (ENSPPYG00000005320) #35	FAM216B (ENSPPYG00000005321) #36	ENSPPYG00000005322 #37	DNAJC15 (ENSPPYG00000005323)	ENOX1 (ENSPPYG00000005324)	CCDC122 (ENSPPYG00000005326)
Gibbon	MODERN SPECIES	20	ZMYM2 (ENSNLEG00000001400)	ZMYM5 (ENSNLEG00000001352)	PSPC1 (ENSNLEG00000001294)	MPHOSPH8 (ENSNLEG00000001235)	ENSNLEG00000027511	ENSNLEG00000001229	ENSNLEG00000010547	ENSNLEG00000001175	ENSNLEG00000034558	COG6 (ENSNLEG00000001136) #15	ENSNLEG00000031647 #16	FOXO1 (ENSNLEG00000001156) #17	MRPS31 (ENSNLEG00000001164) #19	SLC25A15 (ENSNLEG00000001185) #20	ELF1 (ENSNLEG00000001197) #21	WBP4 (ENSNLEG00000001220) #22	KBTBD6 (ENSNLEG00000030487) #23	ENSNLEG00000028817	KBTBD7 (ENSNLEG00000028454) #25	MTRF1 (ENSNLEG00000001236) #26	NAA16 (ENSNLEG00000001282) #29	ENSNLEG00000018204 #30	RGCC (ENSNLEG00000001295) #31	VWA8 (ENSNLEG00000001302) #32	DGKH (ENSNLEG00000001525) #33	ENSNLEG00000033442	AKAP11 (ENSNLEG00000001589) #34	TNFSF11 (ENSNLEG00000031302) #35	FAM216B (ENSNLEG00000033194) #36	ENSNLEG00000001705 #37	ENSNLEG00000018241
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Rhinopithecus	ANCESTRAL SPECIES	315											ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000166676 #24	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00940000153294.m.a.c.b.p.c.a	ENSGT00390000014818.g.b.b	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34
Golden snub-nosed monkey	MODERN SPECIES	1793										ENSRROG00000032615 #16	FOXO1 (ENSRROG00000041784) #17	MRPS31 (ENSRROG00000040313) #19	SLC25A15 (ENSRROG00000041123) #20	ENSRROG00000043031	ELF1 (ENSRROG00000037511) #21	WBP4 (ENSRROG00000044405) #22	KBTBD6 (ENSRROG00000026268) #23	ENSRROG00000037292 #24	KBTBD7 (ENSRROG00000028641) #25	MTRF1 (ENSRROG00000035345) #26	ENSRROG00000015827	ENSRROG00000024797	NAA16 (ENSRROG00000031116) #29	RGCC (ENSRROG00000029679) #31	VWA8 (ENSRROG00000043191) #32	DGKH (ENSRROG00000030004) #33	AKAP11 (ENSRROG00000030390) #34	ENSRROG00000025518	TNFSF11 (ENSRROG00000028662) #35	FAM216B (ENSRROG00000003798) #36	ENSRROG00000034426
Black snub-nosed monkey	MODERN SPECIES	1507										ENSRBIG00000000400 #16	FOXO1 (ENSRBIG00000026765) #17	MRPS31 (ENSRBIG00000034673) #19	SLC25A15 (ENSRBIG00000037546) #20	ENSRBIG00000000771	ELF1 (ENSRBIG00000028865) #21	WBP4 (ENSRBIG00000041962) #22	KBTBD6 (ENSRBIG00000037297) #23	ENSRBIG00000035054 #24	ENSRBIG00000030206 #25	MTRF1 (ENSRBIG00000007069) #26	ENSRBIG00000043748	ENSRBIG00000026954	NAA16 (ENSRBIG00000037675) #29	RGCC (ENSRBIG00000031991) #31	VWA8 (ENSRBIG00000034278) #32	DGKH (ENSRBIG00000030309) #33	AKAP11 (ENSRBIG00000036023) #34	ENSRBIG00000037894	TNFSF11 (ENSRBIG00000036386) #35	NDN (ENSRBIG00000009280)	MAGEL2 (ENSRBIG00000007801)
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Vervet Monkey	MODERN SPECIES	22	SUPT20H (ENSCSAG00000017865)	CSNK1A1L (ENSCSAG00000018597)	POSTN (ENSCSAG00000017861)	ENSCSAG00000017857 #7	UFM1 (ENSCSAG00000017856) ##8	FREM2 (ENSCSAG00000017855)	STOML3 (ENSCSAG00000017851) #10	PROSER1 (ENSCSAG00000017848) #11	NHLRC3 (ENSCSAG00000017845)	LHFPL6 (ENSCSAG00000018599) #14	COG6 (ENSCSAG00000017844) #15	FOXO1 (ENSCSAG00000017842) #17	MRPS31 (ENSCSAG00000017841) #19	SLC25A15 (ENSCSAG00000017838) #20	ELF1 (ENSCSAG00000017837) #21	WBP4 (ENSCSAG00000017836) #22	KBTBD6 (ENSCSAG00000018601) #23	KBTBD7 (ENSCSAG00000018604) #25	MTRF1 (ENSCSAG00000017835) #26	NAA16 (ENSCSAG00000017833) #29	RGCC (ENSCSAG00000017831) #31	VWA8 (ENSCSAG00000017823) #32	DGKH (ENSCSAG00000017813) #33	AKAP11 (ENSCSAG00000017811) #34	TNFSF11 (ENSCSAG00000017803) #35	FAM216B (ENSCSAG00000017800) #36	EPSTI1 (ENSCSAG00000017797) #37	DNAJC15 (ENSCSAG00000017791)	ENOX1 (ENSCSAG00000017789)	CCDC122 (ENSCSAG00000017787)	LACC1 (ENSCSAG00000017785)
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558 #17	ENSGT00390000016119.q.b	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Macaca	ANCESTRAL SPECIES	19	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00940000161558 #17	ENSGT00390000016119.q.b	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00390000010391.x #8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT01100000263509.a.a.a.c.a.b	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT01100000263493.a.b.a.b.a.b.a.b.a.a.b	ENSGT01100000263539.b.a.a.a.b.b.a.b.b.a.a.a.a.b.a	ENSGT00940000161558 #17	ENSGT00390000016119.q.b	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Rhesus	MODERN SPECIES	8	FREM2 (ENSMMUG00000002702)	NHLRC3 (ENSMMUG00000002113)	STOML3 (ENSMMUG00000002107) #10	PROSER1 (ENSMMUG00000002109) #11	ENSMMUG00000052735	LHFPL6 (ENSMMUG00000004485) #14	COG6 (ENSMMUG00000004486) #15	ENSMMUG00000055317	ENSMMUG00000052676	ENSMMUG00000050501	FOXO1 (ENSMMUG00000030780) #17	MRPS31 (ENSMMUG00000001899) #19	ENSMMUG00000045155	ENSMMUG00000063249	ELF1 (ENSMMUG00000007880) #21	WBP4 (ENSMMUG00000007881) #22	KBTBD7 (ENSMMUG00000004799) #25	MTRF1 (ENSMMUG00000017978) #26	NAA16 (ENSMMUG00000011590) #29	RGCC (ENSMMUG00000011593) #31	VWA8 (ENSMMUG00000011594) #32	ENSMMUG00000055578	DGKH (ENSMMUG00000023076) #33	AKAP11 (ENSMMUG00000023083) #34	TNFSF11 (ENSMMUG00000017876) #35	FAM216B (ENSMMUG00000014925) #36	EPSTI1 (ENSMMUG00000014926) #37	ENSMMUG00000056651	DNAJC15 (ENSMMUG00000052269)	ENOX1 (ENSMMUG00000002330)	CCDC122 (ENSMMUG00000007070)
Crab-eating macaque	MODERN SPECIES	8	FREM2 (ENSMFAG00000002618)	STOML3 (ENSMFAG00000037302) #10	PROSER1 (ENSMFAG00000003151) #11	NHLRC3 (ENSMFAG00000001573)	ENSMFAG00000055940	LHFPL6 (ENSMFAG00000039258) #14	COG6 (ENSMFAG00000030834) #15	ENSMFAG00000051233	ENSMFAG00000049371	ENSMFAG00000058598	FOXO1 (ENSMFAG00000044565) #17	ENSMFAG00000003025	MRPS31 (ENSMFAG00000003515) #19	SLC25A15 (ENSMFAG00000044042) #20	ELF1 (ENSMFAG00000040587) #21	WBP4 (ENSMFAG00000034268) #22	KBTBD6 (ENSMFAG00000056684) #23	KBTBD7 (ENSMFAG00000002271) #25	MTRF1 (ENSMFAG00000037972) #26	NAA16 (ENSMFAG00000043606) #29	RGCC (ENSMFAG00000043030) #31	VWA8 (ENSMFAG00000036408) #32	DGKH (ENSMFAG00000038026) #33	AKAP11 (ENSMFAG00000003034) #34	ENSMFAG00000047641	TNFSF11 (ENSMFAG00000057769) #35	FAM216B (ENSMFAG00000045377) #36	EPSTI1 (ENSMFAG00000040540) #37	DNAJC15 (ENSMFAG00000011195)	ENOX1 (ENSMFAG00000025611)	CCDC122 (ENSMFAG00000032197)
Pig-tailed macaque	MODERN SPECIES	180					FREM2 (ENSMNEG00000030699)	STOML3 (ENSMNEG00000036735) #10	PROSER1 (ENSMNEG00000032422) #11	NHLRC3 (ENSMNEG00000040342)	LHFPL6 (ENSMNEG00000039244) #14	COG6 (ENSMNEG00000042440) #15	FOXO1 (ENSMNEG00000031472) #17	ENSMNEG00000030680	MRPS31 (ENSMNEG00000031161) #19	SLC25A15 (ENSMNEG00000042783) #20	ELF1 (ENSMNEG00000044466) #21	WBP4 (ENSMNEG00000039992) #22	KBTBD6 (ENSMNEG00000038336) #23	KBTBD7 (ENSMNEG00000018279) #25	MTRF1 (ENSMNEG00000035487) #26	NAA16 (ENSMNEG00000036159) #29	RGCC (ENSMNEG00000036862) #31	VWA8 (ENSMNEG00000039926) #32	DGKH (ENSMNEG00000038131) #33	AKAP11 (ENSMNEG00000045160) #34	ENSMNEG00000036293	TNFSF11 (ENSMNEG00000031662) #35	FAM216B (ENSMNEG00000040597) #36	EPSTI1 (ENSMNEG00000027227) #37	DNAJC15 (ENSMNEG00000039087)	ENOX1 (ENSMNEG00000040967)	CCDC122 (ENSMNEG00000039888)
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00390000010391.w.a ##8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558.h #17	ENSGT00390000016119.q.b	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601.k #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Olive baboon	MODERN SPECIES	6	POSTN (ENSPANG00000009523)	TRPC4 (ENSPANG00000023049) #7	UFM1 (ENSPANG00000050784) ##8	FREM2 (ENSPANG00000006217)	STOML3 (ENSPANG00000012476) #10	PROSER1 (ENSPANG00000000887) #11	ENSPANG00000007574	LHFPL6 (ENSPANG00000018802) #14	COG6 (ENSPANG00000021628) #15	ENSPANG00000050895	FOXO1 (ENSPANG00000016677) #17	ENSPANG00000033371	MRPS31 (ENSPANG00000012316) #19	SLC25A15 (ENSPANG00000002941) #20	ELF1 (ENSPANG00000005718) #21	WBP4 (ENSPANG00000016720) #22	KBTBD6 (ENSPANG00000016775) #23	KBTBD7 (ENSPANG00000023472) #25	MTRF1 (ENSPANG00000010809) #26	NAA16 (ENSPANG00000012072) #29	ENSPANG00000050408 #30	RGCC (ENSPANG00000007573) #31	VWA8 (ENSPANG00000024519) #32	DGKH (ENSPANG00000002940) #33	AKAP11 (ENSPANG00000012071) #34	TNFSF11 (ENSPANG00000032369) #35	FAM216B (ENSPANG00000016866) #36	EPSTI1 (ENSPANG00000012981) #37	ENSPANG00000047876	DNAJC15 (ENSPANG00000016508)	ENSPANG00000039549
Cercopithecinae_d	ANCESTRAL SPECIES	54	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00910000147020 #9	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00490000043976 #16	ENSGT00940000161558.h #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000164310.e	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601.k #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Sooty mangabey	MODERN SPECIES	125	POSTN (ENSCATG00000008419)	TRPC4 (ENSCATG00000045261) #7	ENSCATG00000042038	UFM1 (ENSCATG00000044815) #8	FREM2 (ENSCATG00000040998)	STOML3 (ENSCATG00000034392) #10	PROSER1 (ENSCATG00000033393) #11	NHLRC3 (ENSCATG00000041715)	LHFPL6 (ENSCATG00000040767) #14	COG6 (ENSCATG00000039958) #15	ENSCATG00000040158 #16	FOXO1 (ENSCATG00000036830) #17	MRPS31 (ENSCATG00000030049) #19	SLC25A15 (ENSCATG00000045116) #20	ELF1 (ENSCATG00000034525) #21	WBP4 (ENSCATG00000035168) #22	KBTBD6 (ENSCATG00000011867) #23	KBTBD7 (ENSCATG00000011239) #25	MTRF1 (ENSCATG00000009909) #26	NAA16 (ENSCATG00000041542) #29	RGCC (ENSCATG00000045340) #31	VWA8 (ENSCATG00000033144) #32	DGKH (ENSCATG00000033157) #33	AKAP11 (ENSCATG00000033496) #34	TNFSF11 (ENSCATG00000025191) #35	FAM216B (ENSCATG00000043583) #36	EPSTI1 (ENSCATG00000015725) #37	DNAJC15 (ENSCATG00000042886)	ENOX1 (ENSCATG00000023824)	CCDC122 (ENSCATG00000017564)	LACC1 (ENSCATG00000038160)
Drill	MODERN SPECIES	1037								LHFPL6 (ENSMLEG00000006146) #14	COG6 (ENSMLEG00000029962) #15	ENSMLEG00000012276 #16	ENSMLEG00000031876	ENSMLEG00000030043	MRPS31 (ENSMLEG00000031037) #19	SLC25A15 (ENSMLEG00000028505) #20	ELF1 (ENSMLEG00000011515) #21	WBP4 (ENSMLEG00000036795) #22	KBTBD6 (ENSMLEG00000004429) #23	ENSMLEG00000039164	KBTBD7 (ENSMLEG00000021884) #25	MTRF1 (ENSMLEG00000033582) #26	NAA16 (ENSMLEG00000030571) #29	RGCC (ENSMLEG00000037303) #31	ENSMLEG00000031528 #32
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000154335.a	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877.n #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Cebidae	ANCESTRAL SPECIES	26	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000154335.a	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877.m #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Marmoset	MODERN SPECIES	17	FREM2 (ENSCJAG00000017883)	STOML3 (ENSCJAG00000017876) #10	PROSER1 (ENSCJAG00000017859) #11	NHLRC3 (ENSCJAG00000017851)	ENSCJAG00000085988	LHFPL6 (ENSCJAG00000017847) #14	ENSCJAG00000079540	COG6 (ENSCJAG00000017833) #15	ENSCJAG00000076162	ENSCJAG00000084413	FOXO1 (ENSCJAG00000068966) #17	MRPS31 (ENSCJAG00000017805) #19	SLC25A15 (ENSCJAG00000069518) #20	ENSCJAG00000017791	ELF1 (ENSCJAG00000017782) #21	WBP4 (ENSCJAG00000017768) #22	KBTBD6 (ENSCJAG00000017764) #23	MTRF1 (ENSCJAG00000017739) #26	NAA16 (ENSCJAG00000017696) #29	ENSCJAG00000017692 #31	VWA8 (ENSCJAG00000017682) #32	ENSCJAG00000071641	DGKH (ENSCJAG00000017656) #33	AKAP11 (ENSCJAG00000017644) #34	ENSCJAG00000072205	TNFSF11 (ENSCJAG00000083138) #35	FAM216B (ENSCJAG00000079498) #36	EPSTI1 (ENSCJAG00000017594) #37	ENSCJAG00000071289	ENOX1 (ENSCJAG00000017557)	CCDC122 (ENSCJAG00000017551)
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b #7	ENSGT00390000010391.x #8	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b #10	ENSGT00730000111188 #11	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a #14	ENSGT00390000013518 #15	ENSGT00940000161558 #17	ENSGT00390000010017 #19	ENSGT00730000110966 #20	ENSGT00940000154335.a	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877.m #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00950000183098.b.a.a.a.a	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Bolivian squirrel monkey	MODERN SPECIES	106	POSTN (ENSSBOG00000020359)	TRPC4 (ENSSBOG00000024580) #7	ENSSBOG00000033160 #8	FREM2 (ENSSBOG00000029178)	STOML3 (ENSSBOG00000025427) #10	PROSER1 (ENSSBOG00000004637) #11	NHLRC3 (ENSSBOG00000022898)	ENSSBOG00000020284	LHFPL6 (ENSSBOG00000032581) #14	COG6 (ENSSBOG00000028313) #15	ENSSBOG00000019220	MRPS31 (ENSSBOG00000034159) #19	SLC25A15 (ENSSBOG00000003370) #20	ENSSBOG00000024617	ELF1 (ENSSBOG00000024356) #21	WBP4 (ENSSBOG00000026978) #22	KBTBD6 (ENSSBOG00000008935) #23	KBTBD7 (ENSSBOG00000011075) #25	ENSSBOG00000025048	MTRF1 (ENSSBOG00000004572) #26	NAA16 (ENSSBOG00000030176) #29	RGCC (ENSSBOG00000034616) #31	ENSSBOG00000016579	VWA8 (ENSSBOG00000031026) #32	DGKH (ENSSBOG00000019023) #33	AKAP11 (ENSSBOG00000013175) #34	ENSSBOG00000024102	ENSSBOG00000033805	TNFSF11 (ENSSBOG00000027654) #35	FAM216B (ENSSBOG00000028998) #36	ENSSBOG00000031675
Capuchin	MODERN SPECIES	314										ENSCCAG00000027012	SNX7 (ENSCCAG00000030230)	PLPPR5 (ENSCCAG00000037863)	PLPPR4 (ENSCCAG00000028873)	ENSCCAG00000018207	ELF1 (ENSCCAG00000036811) #21	WBP4 (ENSCCAG00000024682) #22	KBTBD6 (ENSCCAG00000023579) #23	ENSCCAG00000031713	MTRF1 (ENSCCAG00000035116) #26	NAA16 (ENSCCAG00000027828) #29	RGCC (ENSCCAG00000032569) #31	ENSCCAG00000037264	VWA8 (ENSCCAG00000033369) #32
Mas night monkey	MODERN SPECIES	1365											ENSANAG00000028492	ELF1 (ENSANAG00000027987) #21	ENSANAG00000030196	ENSANAG00000028273	ENSANAG00000031445	WBP4 (ENSANAG00000028222) #22	KBTBD6 (ENSANAG00000009761) #23	KBTBD7 (ENSANAG00000019743) #25	ENSANAG00000023063 #26	NAA16 (ENSANAG00000027984) #29	RGCC (ENSANAG00000025873) #31	ENSANAG00000025939	VWA8 (ENSANAG00000026149) #32	DGKH (ENSANAG00000031866) #33	AKAP11 (ENSANAG00000029720) #34
Tarsier	MODERN SPECIES	6888															EIF4H (ENSTSYG00000006807)	WBP4 (ENSTSYG00000000055) #22	KLRB1 (ENSTSYG00000013018)
Strepsirrhini	ANCESTRAL SPECIES	27	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700.i	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Mouse lemur	MODERN SPECIES	4	PCDH9 (ENSMICG00000002338)	ENSMICG00000045460	ENSMICG00000038136	PCDH20 (ENSMICG00000032560)	TDRD3 (ENSMICG00000009982)	ENSMICG00000043260	DIAPH3 (ENSMICG00000011388)	PCDH17 (ENSMICG00000008032)	ENSMICG00000028372	OLFM4 (ENSMICG00000001798)	ENSMICG00000036582	PCDH8 (ENSMICG00000014653)	CNMD (ENSMICG00000038059)	SUGT1 (ENSMICG00000014614)	ELF1 (ENSMICG00000035688) #21	WBP4 (ENSMICG00000047481) #22	KBTBD7 (ENSMICG00000014566) #25	MTRF1 (ENSMICG00000033131) #26	NAA16 (ENSMICG00000017489) #29	RGCC (ENSMICG00000027653) #31	VWA8 (ENSMICG00000017491) #32	ENSMICG00000030374	ENSMICG00000043956	DGKH (ENSMICG00000017492) #33	AKAP11 (ENSMICG00000027504) #34	TNFSF11 (ENSMICG00000028647) #35	FAM216B (ENSMICG00000007430) #36	EPSTI1 (ENSMICG00000007681) #37	DNAJC15 (ENSMICG00000036429)	ENOX1 (ENSMICG00000007704)	ENSMICG00000030056
Lemuriformes_a	ANCESTRAL SPECIES	41											ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700.i	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Greater bamboo lemur	MODERN SPECIES	453											OLFM4 (ENSPSMG00000005755)	PCDH8 (ENSPSMG00000005751)	CNMD (ENSPSMG00000005737)	SUGT1 (ENSPSMG00000005716)	ELF1 (ENSPSMG00000005676) #21	WBP4 (ENSPSMG00000005653) #22
Bushbaby	MODERN SPECIES	155			ENSOGAG00000030862	PCDH9 (ENSOGAG00000011570)	PCDH20 (ENSOGAG00000004914)	TDRD3 (ENSOGAG00000005898)	DIAPH3 (ENSOGAG00000001667)	ENSOGAG00000028793	PCDH17 (ENSOGAG00000034022)	ENSOGAG00000030682	OLFM4 (ENSOGAG00000010443)	PCDH8 (ENSOGAG00000000829)	CNMD (ENSOGAG00000015188)	ENSOGAG00000008220	ELF1 (ENSOGAG00000006754) #21	WBP4 (ENSOGAG00000015224) #22	ENSOGAG00000024163	KBTBD7 (ENSOGAG00000024425) #25	ENSOGAG00000009719 #26	NAA16 (ENSOGAG00000007188) #29	RGCC (ENSOGAG00000014070) #31	VWA8 (ENSOGAG00000014073) #32
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Tree shrew	MODERN SPECIES	896															ELF1 (ENSTBEG00000013824) #21	WBP4 (ENSTBEG00000014242) #22
Glires	ANCESTRAL SPECIES	22	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Lagomorpha	ANCESTRAL SPECIES	56	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00390000014262	ENSGT00940000162467.b
Rabbit	MODERN SPECIES	19	PCDH20 (ENSOCUG00000016877)	ENSOCUG00000030963	TDRD3 (ENSOCUG00000014261)	DIAPH3 (ENSOCUG00000001719)	ENSOCUG00000037923	PCDH17 (ENSOCUG00000005237)	ENSOCUG00000024464	ENSOCUG00000023238	ENSOCUG00000026932	ENSOCUG00000006349	ENSOCUG00000034427	PCDH8 (ENSOCUG00000008197)	CNMD (ENSOCUG00000005852)	ENSOCUG00000036807	ELF1 (ENSOCUG00000010580) #21	WBP4 (ENSOCUG00000004256) #22	ENSOCUG00000014016 #25	MTRF1 (ENSOCUG00000025207) #26	NAA16 (ENSOCUG00000013024) #29	ENSOCUG00000032894	ENSOCUG00000021190	ENSOCUG00000014903 #31	ENSOCUG00000039664	VWA8 (ENSOCUG00000014909) #32	DGKH (ENSOCUG00000015981) #33	AKAP11 (ENSOCUG00000016016) #34	ENSOCUG00000006608	TNFSF11 (ENSOCUG00000011051) #35	EPSTI1 (ENSOCUG00000000716) #37	DNAJC15 (ENSOCUG00000001696)	ENOX1 (ENSOCUG00000006639)
Pika	MODERN SPECIES	646																ENSOPRG00000015589 #22
Rodentia	ANCESTRAL SPECIES	22	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154415.`b.f	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Marmotini	ANCESTRAL SPECIES	29									ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00940000155157.l	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647	ENSGT00940000159144.B
Marmotini_b	ANCESTRAL SPECIES	240										ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00940000155157.l	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31
Squirrel	MODERN SPECIES	267										OLFM4 (ENSSTOG00000019753)	PCDH8 (ENSSTOG00000022966)	CNMD (ENSSTOG00000004192)	SUGT1 (ENSSTOG00000004159)	ELF1 (ENSSTOG00000007700) #21	ENSSTOG00000006234	WBP4 (ENSSTOG00000024976) #22	KBTBD7 (ENSSTOG00000029195) #25	MTRF1 (ENSSTOG00000021682) #26	NAA16 (ENSSTOG00000002798) #29	RGCC (ENSSTOG00000025358) #31
Arctic ground squirrel	MODERN SPECIES	216										OLFM4 (ENSUPAG00010022208)	PCDH8 (ENSUPAG00010022211)	CNMD (ENSUPAG00010022215)	SUGT1 (ENSUPAG00010022218)	ELF1 (ENSUPAG00010022223) #21	ENSUPAG00010022225	WBP4 (ENSUPAG00010022226) #22	KBTBD7 (ENSUPAG00010022229) #25	MTRF1 (ENSUPAG00010022231) #26	NAA16 (ENSUPAG00010022237) #29	RGCC (ENSUPAG00010022251) #31
Alpin marmot	MODERN SPECIES	13									OLFM4 (ENSMMMG00000000484)	PCDH8 (ENSMMMG00000000439)	CNMD (ENSMMMG00000000405)	SUGT1 (ENSMMMG00000000341)	ENSMMMG00000000315	ELF1 (ENSMMMG00000000224) #21	ENSMMMG00000000196	WBP4 (ENSMMMG00000000179) #22	KBTBD7 (ENSMMMG00000000126) #25	MTRF1 (ENSMMMG00000000091) #26	NAA16 (ENSMMMG00000000060) #29	RGCC (ENSMMMG00000023619) #31	VWA8 (ENSMMMG00000023535) #32	DGKH (ENSMMMG00000023481) #33	AKAP11 (ENSMMMG00000023475) #34	TNFSF11 (ENSMMMG00000023474) #35	ENSMMMG00000023473	EPSTI1 (ENSMMMG00000023471) #37	ENOX1 (ENSMMMG00000023468)	ENSMMMG00000023467	CCDC122 (ENSMMMG00000023465)	LACC1 (ENSMMMG00000023463)	TSC22D1 (ENSMMMG00000023448)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005003513	PCDH20 (ENSSVLG00005003533)	ENSSVLG00005003547	DIAPH3 (ENSSVLG00005003826)	ENSSVLG00005004190	ENSSVLG00005004213	PCDH17 (ENSSVLG00005004228)	ENSSVLG00005004248	ENSSVLG00005004273	OLFM4 (ENSSVLG00005004306)	PCDH8 (ENSSVLG00005004344)	CNMD (ENSSVLG00005004380)	SUGT1 (ENSSVLG00005004421)	ENSSVLG00005004459	ELF1 (ENSSVLG00005004493) #21	WBP4 (ENSSVLG00005004520) #22	ENSSVLG00005004557	ENSSVLG00005004565 #26	NAA16 (ENSSVLG00005004585) #29	RGCC (ENSSVLG00005004637) #31	VWA8 (ENSSVLG00005004690) #32	DGKH (ENSSVLG00005000391) #33	AKAP11 (ENSSVLG00005000468) #34	TNFSF11 (ENSSVLG00005000540) #35	ENSSVLG00005000585	FAM216B (ENSSVLG00005000610) #36	EPSTI1 (ENSSVLG00005000671) #37	DNAJC15 (ENSSVLG00005000749)	ENOX1 (ENSSVLG00005000776)	CCDC122 (ENSSVLG00005000800)	LACC1 (ENSSVLG00005000824)
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000013790	ENSGT00390000005954.k.a	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954.k.a	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT01060000249039
Hystricomorpha_b	ANCESTRAL SPECIES	44	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954.k.a	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a	ENSGT00390000015682	ENSGT00940000158961
Long-tailed chinchilla	MODERN SPECIES	111	MZT1 (ENSCLAG00000001929)	DACH1 (ENSCLAG00000002015)	KLHL1 (ENSCLAG00000002153)	PCDH9 (ENSCLAG00000002374)	PCDH20 (ENSCLAG00000002449)	TDRD3 (ENSCLAG00000002654)	DIAPH3 (ENSCLAG00000003120)	PCDH17 (ENSCLAG00000007232)	ENSCLAG00000017686	ENSCLAG00000007530	OLFM4 (ENSCLAG00000007743)	PCDH8 (ENSCLAG00000007947)	CNMD (ENSCLAG00000008378)	SUGT1 (ENSCLAG00000002389)	ELF1 (ENSCLAG00000002453) #21	WBP4 (ENSCLAG00000002494) #22
Degu	MODERN SPECIES	163												ENSODEG00000005825	ENSODEG00000005242	ELF1 (ENSODEG00000005272) #21	ENSODEG00000005378	WBP4 (ENSODEG00000005811) #22	ENSODEG00000004948	KBTBD7 (ENSODEG00000019293) #25	MTRF1 (ENSODEG00000005782) #26	ENSODEG00000006513	RGCC (ENSODEG00000005723) #31	VWA8 (ENSODEG00000006290) #32	ENSODEG00000005696	ENSODEG00000019364	ENSODEG00000019318	ENSODEG00000006776	DGKH (ENSODEG00000006365) #33	AKAP11 (ENSODEG00000006558) #34	ENSODEG00000007562	CPB2 (ENSODEG00000005426)	ZC3H13 (ENSODEG00000005178)
Guinea pig	MODERN SPECIES	6	ALG11 (ENSCPOG00000021015)	ATP7B (ENSCPOG00000001644)	WDFY2 (ENSCPOG00000003222)	INTS6 (ENSCPOG00000000077)	SERPINE3 (ENSCPOG00000026248)	FAM124A (ENSCPOG00000032191)	PCDH20 (ENSCPOG00000010664)	TDRD3 (ENSCPOG00000010437)	DIAPH3 (ENSCPOG00000007425)	ENSCPOG00000032565	OLFM4 (ENSCPOG00000032792)	PCDH8 (ENSCPOG00000014873)	CNMD (ENSCPOG00000038512)	SUGT1 (ENSCPOG00000003374)	ELF1 (ENSCPOG00000004342) #21	WBP4 (ENSCPOG00000013860) #22	KBTBD7 (ENSCPOG00000008898) #25	MTRF1 (ENSCPOG00000005264) #26	RGCC (ENSCPOG00000035101) #31	VWA8 (ENSCPOG00000006076) #32	DGKH (ENSCPOG00000006087) #33	AKAP11 (ENSCPOG00000006094) #34	TNFSF11 (ENSCPOG00000031600) #35	ENSCPOG00000040476 #37	DNAJC15 (ENSCPOG00000003485)	ENOX1 (ENSCPOG00000020461)	CCDC122 (ENSCPOG00000003514)	LACC1 (ENSCPOG00000011253)	ENSCPOG00000031530	TSC22D1 (ENSCPOG00000000560)	NUFIP1 (ENSCPOG00000005828)
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000032376	ENSHGLG00000045977	ENSHGLG00000051018	PCDH17 (ENSHGLG00000006849)	ENSHGLG00000033401	ENSHGLG00000034074	ENSHGLG00000042301	ENSHGLG00000047426	ENSHGLG00000036656	ENSHGLG00000003692	PCDH8 (ENSHGLG00000003306)	ENSHGLG00000034939	ENSHGLG00000008247	ENSHGLG00000005329 #21	ENSHGLG00000045934	WBP4 (ENSHGLG00000004585) #22	KBTBD7 (ENSHGLG00000020078) #25	MTRF1 (ENSHGLG00000003210) #26	ENSHGLG00000003000	ENSHGLG00000040621	ENSHGLG00000039892	NAA16 (ENSHGLG00000008702) #29	ENSHGLG00000035169	RGCC (ENSHGLG00000006185) #31	VWA8 (ENSHGLG00000007298) #32	DGKH (ENSHGLG00000018938) #33	ENSHGLG00000007054 #34	ENSHGLG00000046376	ENSHGLG00000036055	ENSHGLG00000043143 #35	FAM216B (ENSHGLG00000004363) #36
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Kangaroo rat	MODERN SPECIES	320	Dis3 (ENSDORG00000007295)	Mzt1 (ENSDORG00000007292)	Klhl1 (ENSDORG00000014310)	Pcdh9 (ENSDORG00000000735)	ENSDORG00000027613	ENSDORG00000001884	Tdrd3 (ENSDORG00000008714)	Diaph3 (ENSDORG00000000055)	Pcdh17 (ENSDORG00000025566)	ENSDORG00000013874	Olfm4 (ENSDORG00000012987)	Pcdh8 (ENSDORG00000009041)	Cnmd (ENSDORG00000013065)	Sugt1 (ENSDORG00000013064)	Elf1 (ENSDORG00000026436) #21	Wbp4 (ENSDORG00000007755) #22	Kbtbd7 (ENSDORG00000023750) #25	Mtrf1 (ENSDORG00000016429) #26	Naa16 (ENSDORG00000012584) #29	Rgcc (ENSDORG00000015195) #31	Vwa8 (ENSDORG00000011298) #32	Dgkh (ENSDORG00000005024) #33	Tnfsf11 (ENSDORG00000026136) #35	Fam216b (ENSDORG00000007655) #36	Epsti1 (ENSDORG00000004992) #37	Dnajc15 (ENSDORG00000013550)	Enox1 (ENSDORG00000001328)	Ccdc122 (ENSDORG00000015236)	Lacc1 (ENSDORG00000015240)	Serp2 (ENSDORG00000028153)	ENSDORG00000025839
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Lesser Egyptian jerboa	MODERN SPECIES	43	Tdrd3 (ENSJJAG00000023665)	Diaph3 (ENSJJAG00000000502)	ENSJJAG00000016423	ENSJJAG00000023292	ENSJJAG00000017379	Pcdh17 (ENSJJAG00000015973)	ENSJJAG00000021490	ENSJJAG00000009571	ENSJJAG00000024366	ENSJJAG00000022681	Olfm4 (ENSJJAG00000018241)	Pcdh8 (ENSJJAG00000017606)	Cnmd (ENSJJAG00000011534)	Sugt1 (ENSJJAG00000017869)	Elf1 (ENSJJAG00000018266) #21	Wbp4 (ENSJJAG00000014406) #22	ENSJJAG00000001187 #25	Mtrf1 (ENSJJAG00000017590) #26	Rgcc (ENSJJAG00000020348) #31	Vwa8 (ENSJJAG00000021301) #32	Dgkh (ENSJJAG00000015395) #33	Akap11 (ENSJJAG00000005221) #34	Tnfsf11 (ENSJJAG00000000831) #35	Fam216b (ENSJJAG00000018229) #36	ENSJJAG00000009640	Dnajc15 (ENSJJAG00000003576)	Enox1 (ENSJJAG00000022161)	Clpb (ENSJJAG00000010825)	Phox2a (ENSJJAG00000011355)	Inppl1 (ENSJJAG00000013756)	Folr1 (ENSJJAG00000019600)
Muroidea	ANCESTRAL SPECIES	25	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Upper Galilee mountains blind mole rat	MODERN SPECIES	1698								ENSNGAG00000023820	ENSNGAG00000022145	Olfm4 (ENSNGAG00000013517)	Pcdh8 (ENSNGAG00000000936)	ENSNGAG00000023431	Cnmd (ENSNGAG00000022665)	Sugt1 (ENSNGAG00000021964)	Elf1 (ENSNGAG00000023108) #21	Wbp4 (ENSNGAG00000024369) #22	Kbtbd6 (ENSNGAG00000012119) #23	Kbtbd7 (ENSNGAG00000011545) #25	Mtrf1 (ENSNGAG00000014460) #26	Naa16 (ENSNGAG00000004140) #29	Rgcc (ENSNGAG00000022423) #31	Vwa8 (ENSNGAG00000010244) #32	Dgkh (ENSNGAG00000024075) #33	Akap11 (ENSNGAG00000010398) #34	Tnfsf11 (ENSNGAG00000023783) #35	ENSNGAG00000009242	Fam216b (ENSNGAG00000008030) #36	Epsti1 (ENSNGAG00000020070) #37	Dnajc15 (ENSNGAG00000012778)	Enox1 (ENSNGAG00000024175)	ENSNGAG00000010951
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Chinese hamster chok1gshd	MODERN SPECIES	3	Pcdh9 (ENSCGRG00001013105)	ENSCGRG00001017222	ENSCGRG00001021714	ENSCGRG00001009641	Pcdh20 (ENSCGRG00001021707)	Tdrd3 (ENSCGRG00001011297)	Diaph3 (ENSCGRG00001019022)	Pcdh17 (ENSCGRG00001009409)	ENSCGRG00001017435 #24	ENSCGRG00001014173	Olfm4 (ENSCGRG00001022304)	Pcdh8 (ENSCGRG00001015602)	Cnmd (ENSCGRG00001001658)	ENSCGRG00001022636	Elf1 (ENSCGRG00001016200) #21	Wbp4 (ENSCGRG00001002031) #22	ENSCGRG00001009361	ENSCGRG00001000650 #23	Kbtbd7 (ENSCGRG00001022213) #25	Mtrf1 (ENSCGRG00001003065) #26	ENSCGRG00001008906	Naa16 (ENSCGRG00001023139) #29	Rgcc (ENSCGRG00001010708) #31	ENSCGRG00001011992	ENSCGRG00001017855	Vwa8 (ENSCGRG00001023461) #32	Dgkh (ENSCGRG00001012161) #33	Akap11 (ENSCGRG00001020906) #34	Tnfsf11 (ENSCGRG00001013327) #35	Fam216b (ENSCGRG00001000086) #36	Epsti1 (ENSCGRG00001009306) #37
Golden Hamster	MODERN SPECIES	642					ENSMAUG00000007990	Pcdh20 (ENSMAUG00000011323)	Tdrd3 (ENSMAUG00000012562)	Diaph3 (ENSMAUG00000015519)	Pcdh17 (ENSMAUG00000008572)	ENSMAUG00000010405	Olfm4 (ENSMAUG00000013134)	Pcdh8 (ENSMAUG00000017769)	Cnmd (ENSMAUG00000021944)	Sugt1 (ENSMAUG00000011244)	Elf1 (ENSMAUG00000012901) #21	Wbp4 (ENSMAUG00000018253) #22	Kbtbd6 (ENSMAUG00000000372) #23	Kbtbd7 (ENSMAUG00000004183) #25	Mtrf1 (ENSMAUG00000011661) #26	Rgcc (ENSMAUG00000020733) #31	Vwa8 (ENSMAUG00000020740) #32	Dgkh (ENSMAUG00000017457) #33	Akap11 (ENSMAUG00000016985) #34	Tnfsf11 (ENSMAUG00000001005) #35	Fam216b (ENSMAUG00000014549) #36	Epsti1 (ENSMAUG00000018985) #37	Dnajc15 (ENSMAUG00000009642)	Enox1 (ENSMAUG00000019233)	ENSMAUG00000013996	Lacc1 (ENSMAUG00000018912)	Serp2 (ENSMAUG00000019897)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00990000212586	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Prairie vole	MODERN SPECIES	89	Nelfa (ENSMOCG00000000669)	Gm1673 (ENSMOCG00000020620)	Nat8l (ENSMOCG00000017447)	Poln (ENSMOCG00000009309)	Pcdh20 (ENSMOCG00000008392)	Tdrd3 (ENSMOCG00000012962)	Diaph3 (ENSMOCG00000012431)	ENSMOCG00000011873	Pcdh17 (ENSMOCG00000004856)	ENSMOCG00000019804	Olfm4 (ENSMOCG00000016963)	Pcdh8 (ENSMOCG00000020531)	Cnmd (ENSMOCG00000001113)	Sugt1 (ENSMOCG00000002097)	Elf1 (ENSMOCG00000000165) #21	Wbp4 (ENSMOCG00000012721) #22	Kbtbd7 (ENSMOCG00000004494) #25	Mtrf1 (ENSMOCG00000011945) #26	Naa16 (ENSMOCG00000013086) #29
Northern American deer mouse	MODERN SPECIES	22	Spertl (ENSPEMG00000020149)	ENSPEMG00000028743	Pcdh9 (ENSPEMG00000019867)	Pcdh20 (ENSPEMG00000000491)	Tdrd3 (ENSPEMG00000004287)	Diaph3 (ENSPEMG00000013687)	ENSPEMG00000008782	ENSPEMG00000012614	Pcdh17 (ENSPEMG00000029088)	ENSPEMG00000008810	Olfm4 (ENSPEMG00000018107)	Pcdh8 (ENSPEMG00000002218)	Cnmd (ENSPEMG00000001366)	ENSPEMG00000001486	Elf1 (ENSPEMG00000021551) #21	Wbp4 (ENSPEMG00000021764) #22	Kbtbd7 (ENSPEMG00000015250) #25	Mtrf1 (ENSPEMG00000020982) #26	Naa16 (ENSPEMG00000021265) #29	Rgcc (ENSPEMG00000013380) #31	Vwa8 (ENSPEMG00000016456) #32	Dgkh (ENSPEMG00000020442) #33	Akap11 (ENSPEMG00000017768) #34	Tnfsf11 (ENSPEMG00000026330) #35	Fam216b (ENSPEMG00000010168) #36	Epsti1 (ENSPEMG00000012785) #37	Dnajc15 (ENSPEMG00000017585)	Enox1 (ENSPEMG00000009188)	Ccdc122 (ENSPEMG00000013832)	Lacc1 (ENSPEMG00000011166)	ENSPEMG00000024909
Murinae	ANCESTRAL SPECIES	16	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Rat	MODERN SPECIES	6	AABR07018556.1 (ENSRNOG00000049650)	AABR07018132.1 (ENSRNOG00000045597)	Pcdh17 (ENSRNOG00000008970)	AABR07018646.1 (ENSRNOG00000033366)	AABR07018627.1 (ENSRNOG00000038122)	Calm2 (ENSRNOG00000030871)	LOC100361180 (ENSRNOG00000048927)	LOC306079 (ENSRNOG00000031061)	Olfm4 (ENSRNOG00000013280)	Pcdh8 (ENSRNOG00000013101)	Cnmd (ENSRNOG00000012821)	AC123280.1 (ENSRNOG00000033141)	ENSRNOG00000029808	Sugt1 (ENSRNOG00000012594)	Elf1 (ENSRNOG00000011762) #21	Wbp4 (ENSRNOG00000011678) #22	Kbtbd6 (ENSRNOG00000011657) #23	Kbtbd7 (ENSRNOG00000064764) #25	Mtrf1 (ENSRNOG00000047106) #26	Naa16 (ENSRNOG00000045863) #29	ENSRNOG00000067430	Rgcc (ENSRNOG00000042960) #31	ENSRNOG00000064147	Vwa8 (ENSRNOG00000053145) #32	Dgkh (ENSRNOG00000010065) #33	Akap11 (ENSRNOG00000009987) #34	Tnfsf11 (ENSRNOG00000071047) #35	Fam216b (ENSRNOG00000021943) #36	Epsti1 (ENSRNOG00000009471) #37	Dnajc15 (ENSRNOG00000009063)	Enox1 (ENSRNOG00000047817)
Mus	ANCESTRAL SPECIES	8	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00860000135986	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b	ENSGT00390000005130
Shrew mouse	MODERN SPECIES	21	Mzt1 (MGP_PahariEiJ_G0030575)	Dach1 (MGP_PahariEiJ_G0030574)	Klhl1 (MGP_PahariEiJ_G0030573)	Spertl (MGP_PahariEiJ_G0030572)	Pcdh9 (MGP_PahariEiJ_G0030571)	Pcdh20 (MGP_PahariEiJ_G0030570)	Tdrd3 (MGP_PahariEiJ_G0030569)	Diaph3 (MGP_PahariEiJ_G0030568)	Pcdh17 (MGP_PahariEiJ_G0030567)	Olfm4 (MGP_PahariEiJ_G0030566)	MGP_PahariEiJ_G0030565	Pcdh8 (MGP_PahariEiJ_G0030564)	Cnmd (MGP_PahariEiJ_G0030563)	Sugt1 (MGP_PahariEiJ_G0030562)	Elf1 (MGP_PahariEiJ_G0030561) #21	MGP_PahariEiJ_G0030560 #22	MGP_PahariEiJ_G0030559 #23	Kbtbd7 (MGP_PahariEiJ_G0030558) #25	Mtrf1 (MGP_PahariEiJ_G0030557) #26	Naa16 (MGP_PahariEiJ_G0030556) #29	Rgcc (MGP_PahariEiJ_G0030555) #31	Vwa8 (MGP_PahariEiJ_G0030553) #32	Dgkh (MGP_PahariEiJ_G0030552) #33	Akap11 (MGP_PahariEiJ_G0030551) #34	Tnfsf11 (MGP_PahariEiJ_G0030550) #35	Fam216b (MGP_PahariEiJ_G0030549) #36	Epsti1 (MGP_PahariEiJ_G0030548) #37	Dnajc15 (MGP_PahariEiJ_G0030547)	MGP_PahariEiJ_G0030546	Enox1 (MGP_PahariEiJ_G0030545)	Ccdc122 (MGP_PahariEiJ_G0030544)
Mus_A	ANCESTRAL SPECIES	12	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00860000135986	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00940000157896.f	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00860000135986	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00940000157896.f	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000155454	ENSGT00860000135986	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00940000157896.f	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b
Steppe mouse	MODERN SPECIES	2976																Wbp4 (ENSMSIG00000004742) #22	Kbtbd6 (ENSMSIG00000004735) #23	Kbtbd7 (ENSMSIG00000004721) #25	Mtrf1 (ENSMSIG00000004689) #26	Naa16 (ENSMSIG00000004556) #29	Rgcc (ENSMSIG00000004519) #31	ENSMSIG00000004513	Vwa8 (ENSMSIG00000004400) #32	Dgkh (ENSMSIG00000004016) #33	Akap11 (ENSMSIG00000003844) #34	Tnfsf11 (ENSMSIG00000003809) #35	Fam216b (ENSMSIG00000003781) #36	Epsti1 (ENSMSIG00000003651) #37
spretus	MODERN SPECIES	5	Klhl1 (MGP_SPRETEiJ_G0020452)	Spertl (MGP_SPRETEiJ_G0020451)	Pcdh9 (MGP_SPRETEiJ_G0020450)	Pcdh20 (MGP_SPRETEiJ_G0020449)	Tdrd3 (MGP_SPRETEiJ_G0020448)	Diaph3 (MGP_SPRETEiJ_G0020447)	MGP_SPRETEiJ_G0020446	Pcdh17 (MGP_SPRETEiJ_G0020445)	MGP_SPRETEiJ_G0020444	Olfm4 (MGP_SPRETEiJ_G0020443)	MGP_SPRETEiJ_G0020442	Pcdh8 (MGP_SPRETEiJ_G0020441)	Cnmd (MGP_SPRETEiJ_G0020440)	Sugt1 (MGP_SPRETEiJ_G0020439)	Elf1 (MGP_SPRETEiJ_G0020438) #21	Wbp4 (MGP_SPRETEiJ_G0020437) #22	MGP_SPRETEiJ_G0020436 #25	Mtrf1 (MGP_SPRETEiJ_G0020435) #26	Naa16 (MGP_SPRETEiJ_G0020434) #29	Rgcc (MGP_SPRETEiJ_G0020433) #31	Zfp957 (MGP_SPRETEiJ_G0020432)	Vwa8 (MGP_SPRETEiJ_G0020431) #32	Dgkh (MGP_SPRETEiJ_G0020430) #33	Akap11 (MGP_SPRETEiJ_G0020429) #34	Tnfsf11 (MGP_SPRETEiJ_G0020428) #35	Fam216b (MGP_SPRETEiJ_G0020427) #36	Epsti1 (MGP_SPRETEiJ_G0020426) #37	Dnajc15 (MGP_SPRETEiJ_G0020425)	MGP_SPRETEiJ_G0020424	Enox1 (MGP_SPRETEiJ_G0020423)	Ccdc122 (MGP_SPRETEiJ_G0020422)
Mouse	MODERN SPECIES	5	Bora (ENSMUSG00000022070)	Mzt1 (ENSMUSG00000033186)	Dach1 (ENSMUSG00000055639)	Klhl1 (ENSMUSG00000022076)	Spertl (ENSMUSG00000034689)	Pcdh9 (ENSMUSG00000055421)	Pcdh20 (ENSMUSG00000050505)	Tdrd3 (ENSMUSG00000022019)	Diaph3 (ENSMUSG00000022021)	Pcdh17 (ENSMUSG00000035566)	Olfm4 (ENSMUSG00000022026)	Pcdh8 (ENSMUSG00000036422)	Cnmd (ENSMUSG00000022025)	Sugt1 (ENSMUSG00000022024)	Elf1 (ENSMUSG00000036461) #21	Wbp4 (ENSMUSG00000022023) #22	Kbtbd6 (ENSMUSG00000075502) #23	Kbtbd7 (ENSMUSG00000043881) #25	Mtrf1 (ENSMUSG00000022022) #26	Naa16 (ENSMUSG00000022020) #29	Rgcc (ENSMUSG00000022018) #31	Zfp957 (ENSMUSG00000071262)	Vwa8 (ENSMUSG00000058997) #32	Dgkh (ENSMUSG00000034731) #33	Akap11 (ENSMUSG00000022016) #34	Tnfsf11 (ENSMUSG00000022015) #35	Fam216b (ENSMUSG00000045655) #36	Epsti1 (ENSMUSG00000022014) #37	Dnajc15 (ENSMUSG00000022013)	Enox1 (ENSMUSG00000022012)	Ccdc122 (ENSMUSG00000034795)
Ryukyu mouse	MODERN SPECIES	5	Mzt1 (MGP_CAROLIEiJ_G0019558)	Dach1 (MGP_CAROLIEiJ_G0019557)	Klhl1 (MGP_CAROLIEiJ_G0019556)	Spertl (MGP_CAROLIEiJ_G0019555)	Pcdh9 (MGP_CAROLIEiJ_G0019554)	Pcdh20 (MGP_CAROLIEiJ_G0019553)	Tdrd3 (MGP_CAROLIEiJ_G0019551)	Diaph3 (MGP_CAROLIEiJ_G0019550)	Pcdh17 (MGP_CAROLIEiJ_G0019549)	Olfm4 (MGP_CAROLIEiJ_G0019548)	MGP_CAROLIEiJ_G0019547	Pcdh8 (MGP_CAROLIEiJ_G0019546)	Cnmd (MGP_CAROLIEiJ_G0019545)	Sugt1 (MGP_CAROLIEiJ_G0019544)	Elf1 (MGP_CAROLIEiJ_G0019543) #21	Wbp4 (MGP_CAROLIEiJ_G0019542) #22	MGP_CAROLIEiJ_G0019541 #23	Kbtbd7 (MGP_CAROLIEiJ_G0019540) #25	Mtrf1 (MGP_CAROLIEiJ_G0019539) #26	Naa16 (MGP_CAROLIEiJ_G0019538) #29	Rgcc (MGP_CAROLIEiJ_G0019537) #31	MGP_CAROLIEiJ_G0019536	Vwa8 (MGP_CAROLIEiJ_G0019535) #32	Dgkh (MGP_CAROLIEiJ_G0019534) #33	Akap11 (MGP_CAROLIEiJ_G0019533) #34	Tnfsf11 (MGP_CAROLIEiJ_G0019532) #35	Fam216b (MGP_CAROLIEiJ_G0019531) #36	Epsti1 (MGP_CAROLIEiJ_G0019530) #37	Dnajc15 (MGP_CAROLIEiJ_G0019529)	MGP_CAROLIEiJ_G0019528	Enox1 (MGP_CAROLIEiJ_G0019527)
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Common shrew	MODERN SPECIES	1535																WBP4 (ENSSARG00000013533) #22
Hedgehog	MODERN SPECIES	2136																WBP4 (ENSEEUG00000004702) #22
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143309	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Suina	ANCESTRAL SPECIES	29	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.d	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Chacoan peccary	MODERN SPECIES	216	TDRD3 (ENSCWAG00000017371)	ENSCWAG00000017495	DIAPH3 (ENSCWAG00000017632)	ENSCWAG00000019391	ENSCWAG00000019419	PCDH17 (ENSCWAG00000019432)	ENSCWAG00000019461	ENSCWAG00000019477	ENSCWAG00000019495	OLFM4 (ENSCWAG00000019527)	ENSCWAG00000019571	PCDH8 (ENSCWAG00000000054)	CNMD (ENSCWAG00000000097)	SUGT1 (ENSCWAG00000000140)	ELF1 (ENSCWAG00000000184) #21	WBP4 (ENSCWAG00000000246) #22	KBTBD6 (ENSCWAG00000000273) #23	KBTBD7 (ENSCWAG00000000301) #25	MTRF1 (ENSCWAG00000000321) #26	NAA16 (ENSCWAG00000000371) #29	RGCC (ENSCWAG00000000406) #31	VWA8 (ENSCWAG00000000455) #32	DGKH (ENSCWAG00000000630) #33	AKAP11 (ENSCWAG00000000801) #34	TNFSF11 (ENSCWAG00000000851) #35	FAM216B (ENSCWAG00000000885) #36	EPSTI1 (ENSCWAG00000000924) #37	DNAJC15 (ENSCWAG00000001051)	ENOX1 (ENSCWAG00000001073)	CCDC122 (ENSCWAG00000001124)	LACC1 (ENSCWAG00000001143)
Pig	MODERN SPECIES	2	ENSSSCG00000044557	ENSSSCG00000043805	ENSSSCG00000059524	PCDH9 (ENSSSCG00000038842)	PCDH20 (ENSSSCG00000031955)	TDRD3 (ENSSSCG00000009449)	DIAPH3 (ENSSSCG00000009448)	PCDH17 (ENSSSCG00000009446)	ENSSSCG00000035135	OLFM4 (ENSSSCG00000009444)	PCDH8 (ENSSSCG00000009445)	CNMD (ENSSSCG00000009442)	SUGT1 (ENSSSCG00000039338)	ENSSSCG00000047512	ELF1 (ENSSSCG00000009440) #21	WBP4 (ENSSSCG00000031627) #22	KBTBD7 (ENSSSCG00000037413) #25	KBTBD6 (ENSSSCG00000031378) #23	MTRF1 (ENSSSCG00000009436) #26	ENSSSCG00000034029	ENSSSCG00000060529 #29	ENSSSCG00000009435 #29	RGCC (ENSSSCG00000009434) #31	ENSSSCG00000057192	VWA8 (ENSSSCG00000029837) #32	DGKH (ENSSSCG00000009431) #33	AKAP11 (ENSSSCG00000009430) #34	TNFSF11 (ENSSSCG00000052062) #35	FAM216B (ENSSSCG00000009428) #36	EPSTI1 (ENSSSCG00000037572) #37	DNAJC15 (ENSSSCG00000038251)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143309	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Cetacea	ANCESTRAL SPECIES	20	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01030000238532	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01030000238532	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00390000001374.a	ENSGT00390000011725.d.d	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Odontoceti_a	ANCESTRAL SPECIES	24				ENSGT00940000155487	ENSGT00940000157767	ENSGT00390000001374.a	ENSGT00390000011725.d.d	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00940000162770.d.b.b	ENSGT00940000156743	ENSGT00900000141068.e.a	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00390000001374.a	ENSGT00390000011725.d.d	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00940000162770.d.b.b	ENSGT00940000156743	ENSGT00390000012818.o.a.a.a.a.d	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000000378.d.b.fb.b.b	ENSGT00390000006788.a.b	ENSGT00390000005130
Beluga whale	MODERN SPECIES	29		ENSDLEG00000007555	ENSDLEG00000007550	PCDH20 (ENSDLEG00000007543)	ENSDLEG00000007533	ENSDLEG00000007520	TDRD3 (ENSDLEG00000007511)	DIAPH3 (ENSDLEG00000007477)	ENSDLEG00000007455	PCDH17 (ENSDLEG00000007450)	OLFM4 (ENSDLEG00000007414)	PCDH8 (ENSDLEG00000007409)	CNMD (ENSDLEG00000007399)	SUGT1 (ENSDLEG00000007385)	ELF1 (ENSDLEG00000007377) #21	WBP4 (ENSDLEG00000007369) #22	KBTBD6 (ENSDLEG00000007365) #23	KBTBD7 (ENSDLEG00000007360) #25	NAA16 (ENSDLEG00000007348) #29	RGCC (ENSDLEG00000007344) #31	VWA8 (ENSDLEG00000007291) #32	DGKH (ENSDLEG00000007260) #33	AKAP11 (ENSDLEG00000007242) #34	TNFSF11 (ENSDLEG00000007228) #35	FAM216B (ENSDLEG00000007217) #36	EPSTI1 (ENSDLEG00000007205) #37	DNAJC15 (ENSDLEG00000007194)	ENSDLEG00000007189	ENOX1 (ENSDLEG00000007152)	CCDC122 (ENSDLEG00000007128)	LACC1 (ENSDLEG00000007121)
Narwhal	MODERN SPECIES	315	PCDH20 (ENSMMNG00015020105)	ENSMMNG00015020120	ENSMMNG00015020134	TDRD3 (ENSMMNG00015020168)	DIAPH3 (ENSMMNG00015020329)	ENSMMNG00015020730	PCDH17 (ENSMMNG00015020740)	ENSMMNG00015020794	ENSMMNG00015020809	OLFM4 (ENSMMNG00015020840)	PCDH8 (ENSMMNG00015020876)	CNMD (ENSMMNG00015020893)	SUGT1 (ENSMMNG00015020917)	ENSMMNG00015020940	ELF1 (ENSMMNG00015020957) #21	WBP4 (ENSMMNG00015020981) #22	ENSMMNG00015021006 #23	KBTBD7 (ENSMMNG00015021016) #25	MTRF1 (ENSMMNG00015021028) #26	NAA16 (ENSMMNG00015021061) #29	RGCC (ENSMMNG00015021108) #31	VWA8 (ENSMMNG00015021128) #32	DGKH (ENSMMNG00015021180) #33	AKAP11 (ENSMMNG00015021253) #34	TNFSF11 (ENSMMNG00015014578) #35	FAM216B (ENSMMNG00015014608) #36	EPSTI1 (ENSMMNG00015014629) #37	ENSMMNG00015014636	ENSMMNG00015014643	ENOX1 (ENSMMNG00015014653)	CCDC122 (ENSMMNG00015014672)
Vaquita	MODERN SPECIES	9	PCDH20 (ENSPSNG00000018984)	ENSPSNG00000018936	ENSPSNG00000018901	TDRD3 (ENSPSNG00000018838)	DIAPH3 (ENSPSNG00000018689)	ENSPSNG00000018611	ENSPSNG00000018599	PCDH17 (ENSPSNG00000018511)	ENSPSNG00000018462	ENSPSNG00000018416	OLFM4 (ENSPSNG00000018251)	PCDH8 (ENSPSNG00000018182)	CNMD (ENSPSNG00000018053)	SUGT1 (ENSPSNG00000018012)	ELF1 (ENSPSNG00000017963) #21	WBP4 (ENSPSNG00000017925) #22	KBTBD6 (ENSPSNG00000017912) #23	KBTBD7 (ENSPSNG00000017892) #25	MTRF1 (ENSPSNG00000017841) #26	NAA16 (ENSPSNG00000017764) #29	RGCC (ENSPSNG00000017723) #31	VWA8 (ENSPSNG00000016031) #32	DGKH (ENSPSNG00000015456) #33	AKAP11 (ENSPSNG00000015306) #34	TNFSF11 (ENSPSNG00000015104) #35	FAM216B (ENSPSNG00000015047) #36	EPSTI1 (ENSPSNG00000014964) #37	DNAJC15 (ENSPSNG00000014922)	ENOX1 (ENSPSNG00000014858)	CCDC122 (ENSPSNG00000014762)	LACC1 (ENSPSNG00000014708)
Dolphin	MODERN SPECIES	61																WBP4 (ENSTTRG00000010342) #22	KBTBD7 (ENSTTRG00000010353) #25	MTRF1 (ENSTTRG00000010370) #26	NAA16 (ENSTTRG00000010386) #29
Sperm whale	MODERN SPECIES	4	TDRD3 (ENSPCTG00005006554)	ENSPCTG00005006500	DIAPH3 (ENSPCTG00005006190)	ENSPCTG00005006120	ENSPCTG00005006107	ENSPCTG00005006098	PCDH17 (ENSPCTG00005006063)	ENSPCTG00005006037	ENSPCTG00005005982	ENSPCTG00005005971	OLFM4 (ENSPCTG00005005928)	PCDH8 (ENSPCTG00005005899)	CNMD (ENSPCTG00005005865)	SUGT1 (ENSPCTG00005005757)	ELF1 (ENSPCTG00005005674) #21	WBP4 (ENSPCTG00005005625) #22	KBTBD6 (ENSPCTG00005005604) #23	ENSPCTG00005005579	KBTBD7 (ENSPCTG00005005568) #25	MTRF1 (ENSPCTG00005005513) #26	NAA16 (ENSPCTG00005005364) #29	RGCC (ENSPCTG00005005316) #31	VWA8 (ENSPCTG00005005091) #32	DGKH (ENSPCTG00005004470) #33	AKAP11 (ENSPCTG00005004282) #34	TNFSF11 (ENSPCTG00005004229) #35	ENSPCTG00005004218	FAM216B (ENSPCTG00005004201) #36	EPSTI1 (ENSPCTG00005004170) #37	DNAJC15 (ENSPCTG00005004158)	ENOX1 (ENSPCTG00005020727)
Blue whale	MODERN SPECIES	9	TDRD3 (ENSBMSG00010015943)	ENSBMSG00010015925	ENSBMSG00010015915	DIAPH3 (ENSBMSG00010014297)	ENSBMSG00010018224	ENSBMSG00010018211	PCDH17 (ENSBMSG00010018148)	ENSBMSG00010018097	ENSBMSG00010018076	OLFM4 (ENSBMSG00010018005)	PCDH8 (ENSBMSG00010017967)	CNMD (ENSBMSG00010017907)	SUGT1 (ENSBMSG00010017890)	ENSBMSG00010017864	ELF1 (ENSBMSG00010017832) #21	WBP4 (ENSBMSG00010017811) #22	KBTBD6 (ENSBMSG00010017797) #23	KBTBD7 (ENSBMSG00010017778) #25	MTRF1 (ENSBMSG00010017736) #26	NAA16 (ENSBMSG00010017707) #29	RGCC (ENSBMSG00010017667) #31	VWA8 (ENSBMSG00010017626) #32	DGKH (ENSBMSG00010017429) #33	AKAP11 (ENSBMSG00010017386) #34	TNFSF11 (ENSBMSG00010017289) #35	FAM216B (ENSBMSG00010017267) #36	EPSTI1 (ENSBMSG00010017177) #37	ENSBMSG00010017150	ENSBMSG00010017116	ENSBMSG00010017093	ENOX1 (ENSBMSG00010017029)
Pecora	ANCESTRAL SPECIES	23			ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Percora_a	ANCESTRAL SPECIES	25			ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Bovidae	ANCESTRAL SPECIES	25	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00390000012420.f	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT01030000240190	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Caprinae	ANCESTRAL SPECIES	37		ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00390000012420.f	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT01030000240190	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Goat	MODERN SPECIES	3	ENSCHIG00000004079	ENSCHIG00000020620	DIAPH3 (ENSCHIG00000020803)	ENSCHIG00000021621	ENSCHIG00000018989	PCDH17 (ENSCHIG00000011906)	ENSCHIG00000007273	ENSCHIG00000020046	ENSCHIG00000017455	OLFM4 (ENSCHIG00000012620)	PCDH8 (ENSCHIG00000007364)	ENSCHIG00000018869	CNMD (ENSCHIG00000011842)	SUGT1 (ENSCHIG00000016538)	ELF1 (ENSCHIG00000022154) #21	WBP4 (ENSCHIG00000013146) #22	KBTBD6 (ENSCHIG00000008480) #23	KBTBD7 (ENSCHIG00000008970) #25	MTRF1 (ENSCHIG00000011810) #26	NAA16 (ENSCHIG00000020957) #29	RGCC (ENSCHIG00000021125) #31	VWA8 (ENSCHIG00000014923) #32	DGKH (ENSCHIG00000006200) #33	AKAP11 (ENSCHIG00000013636) #34	TNFSF11 (ENSCHIG00000015014) #35	FAM216B (ENSCHIG00000024226) #36	EPSTI1 (ENSCHIG00000023487) #37	DNAJC15 (ENSCHIG00000024974)	ENSCHIG00000017754	ENOX1 (ENSCHIG00000021948)	CCDC122 (ENSCHIG00000005141)
Rambouillet Sheep	MODERN SPECIES	1	TDRD3 (ENSOARG00020003168)	DIAPH3 (ENSOARG00020003805)	ENSOARG00020004829	ENSOARG00020004846	ENSOARG00020004852	ENSOARG00020004868	PCDH17 (ENSOARG00020004877)	VDAC1 (ENSOARG00020004891)	ENSOARG00020004908	OLFM4 (ENSOARG00020004943)	PCDH8 (ENSOARG00020004982)	CNMD (ENSOARG00020005002)	SUGT1 (ENSOARG00020005060)	ELF1 (ENSOARG00020005153) #21	ENSOARG00020005207	WBP4 (ENSOARG00020005228) #22	KBTBD6 (ENSOARG00020005273) #23	KBTBD7 (ENSOARG00020005282) #25	MTRF1 (ENSOARG00020005295) #26	NAA16 (ENSOARG00020005343) #29	RGCC (ENSOARG00020005649) #31	VWA8 (ENSOARG00020005673) #32	DGKH (ENSOARG00020005790) #33	AKAP11 (ENSOARG00020006005) #34	TNFSF11 (ENSOARG00020006031) #35	FAM216B (ENSOARG00020006081) #36	EPSTI1 (ENSOARG00020006110) #37	ENSOARG00020006129	ENOX1 (ENSOARG00020006161)	ENSOARG00020006192	CCDC122 (ENSOARG00020006216)
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00960000190184	ENSGT00390000012420.f	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT01030000240190	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
American bison	MODERN SPECIES	3149									ENSBBBG00000015212	OLFM4 (ENSBBBG00000015204)	PCDH8 (ENSBBBG00000015190)	CNMD (ENSBBBG00000003528)	SUGT1 (ENSBBBG00000002778)	ELF1 (ENSBBBG00000015139) #21	ENSBBBG00000008913	WBP4 (ENSBBBG00000015111) #22	KBTBD6 (ENSBBBG00000002790) #23	KBTBD7 (ENSBBBG00000015058) #25	MTRF1 (ENSBBBG00000008587) #26	NAA16 (ENSBBBG00000000798) #29	ENSBBBG00000003721 #30
Bos	ANCESTRAL SPECIES	22		ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00960000190184	ENSGT00390000012420.f	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601.i #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Bos_a	ANCESTRAL SPECIES	55				ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00550000076230 #30	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601.i #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Wild yak	MODERN SPECIES	437															ENSBMUG00000005585	WBP4 (ENSBMUG00000005572) #22	KBTBD6 (ENSBMUG00000005564) #23	KBTBD7 (ENSBMUG00000005561) #25	MTRF1 (ENSBMUG00000005557) #26	ENSBMUG00000005549 #30	NAA16 (ENSBMUG00000005517) #29	ENSBMUG00000004932 #32
Domestic yak	MODERN SPECIES	6	ENSBGRG00000006743	TDRD3 (ENSBGRG00000006592)	DIAPH3 (ENSBGRG00000006554)	ENSBGRG00000006529	ENSBGRG00000006511	ENSBGRG00000006501	PCDH17 (ENSBGRG00000006468)	ENSBGRG00000006447	ENSBGRG00000006431	ENSBGRG00000006404	OLFM4 (ENSBGRG00000006393)	PCDH8 (ENSBGRG00000006338)	CNMD (ENSBGRG00000006282)	SUGT1 (ENSBGRG00000006244)	ELF1 (ENSBGRG00000006174) #21	WBP4 (ENSBGRG00000006089) #22	KBTBD6 (ENSBGRG00000006050) #23	KBTBD7 (ENSBGRG00000006036) #25	MTRF1 (ENSBGRG00000006009) #26	NAA16 (ENSBGRG00000005856) #29	RGCC (ENSBGRG00000005828) #31	VWA8 (ENSBGRG00000005506) #32	ENSBGRG00000005473	DGKH (ENSBGRG00000005383) #33	AKAP11 (ENSBGRG00000005093) #34	TNFSF11 (ENSBGRG00000005035) #35	FAM216B (ENSBGRG00000004982) #36	EPSTI1 (ENSBGRG00000004611) #37	DNAJC15 (ENSBGRG00000004544)	ENSBGRG00000004533	ENOX1 (ENSBGRG00000004490)
Bos_b	ANCESTRAL SPECIES	4		ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000164795	ENSGT00390000012420.f	ENSGT00900000143582	ENSGT00940000156894	ENSGT00390000013931.a.a.b	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601.i #32	ENSGT00940000164406	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b
Cow	MODERN SPECIES	3	ENSBTAG00000054721	TDRD3 (ENSBTAG00000009308)	DIAPH3 (ENSBTAG00000012443)	ENSBTAG00000051623	ENSBTAG00000053708	ENSBTAG00000051281	PCDH17 (ENSBTAG00000010420)	ENSBTAG00000053445	ENSBTAG00000025953	OLFM4 (ENSBTAG00000022779)	PCDH8 (ENSBTAG00000018179)	CNMD (ENSBTAG00000025502)	SUGT1 (ENSBTAG00000002137)	ELF1 (ENSBTAG00000007356) #21	MTRF1 (ENSBTAG00000012260) #26	WBP4 (ENSBTAG00000016637) #22	KBTBD6 (ENSBTAG00000008656) #23	KBTBD7 (ENSBTAG00000039823) #25	NAA16 (ENSBTAG00000038251) #29	ENSBTAG00000052870 #30	RGCC (ENSBTAG00000034885) #31	VWA8 (ENSBTAG00000001133) #32	ENSBTAG00000053271	DGKH (ENSBTAG00000013879) #33	AKAP11 (ENSBTAG00000014752) #34	TNFSF11 (ENSBTAG00000008924) #35	FAM216B (ENSBTAG00000003595) #36	EPSTI1 (ENSBTAG00000019054) #37	DNAJC15 (ENSBTAG00000034785)	ENOX1 (ENSBTAG00000012434)	CCDC122 (ENSBTAG00000034753)
Hybrid Bos Indicus	MODERN SPECIES	3	TDRD3 (ENSBIXG00005025165)	ENSBIXG00005024798	ENSBIXG00005024782	ENSBIXG00005024758	DIAPH3 (ENSBIXG00005024684)	ENSBIXG00005024539	PCDH17 (ENSBIXG00005024501)	ENSBIXG00005024454	ENSBIXG00005004173	ENSBIXG00005024414	OLFM4 (ENSBIXG00005024360)	PCDH8 (ENSBIXG00005024326)	CNMD (ENSBIXG00005024281)	SUGT1 (ENSBIXG00005007180)	ELF1 (ENSBIXG00005006286) #21	WBP4 (ENSBIXG00005006910) #22	KBTBD6 (ENSBIXG00005006842) #23	KBTBD7 (ENSBIXG00005024104) #25	MTRF1 (ENSBIXG00005024075) #26	NAA16 (ENSBIXG00005024029) #29	ENSBIXG00005023942 #30	ENSBIXG00005006058 #31	VWA8 (ENSBIXG00005023867) #32	ENSBIXG00005006905	DGKH (ENSBIXG00005023801) #33	AKAP11 (ENSBIXG00005023417) #34	TNFSF11 (ENSBIXG00005004003) #35	FAM216B (ENSBIXG00005023313) #36	EPSTI1 (ENSBIXG00005003975) #37	DNAJC15 (ENSBIXG00005023206)	ENSBIXG00005023187
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	17							ENSMMSG00000019306	ENSMMSG00000019340	OLFM4 (ENSMMSG00000019358)	PCDH8 (ENSMMSG00000019403)	CNMD (ENSMMSG00000019460)	SUGT1 (ENSMMSG00000019517)	ELF1 (ENSMMSG00000019566) #21	ENSMMSG00000019595	ENSMMSG00000019606	ENSMMSG00000019629 #22	ENSMMSG00000019685 #23	KBTBD7 (ENSMMSG00000019725) #25	ENSMMSG00000019729 #26	ENSMMSG00000019739 #29	ENSMMSG00000019760 #29	RGCC (ENSMMSG00000019778) #31	VWA8 (ENSMMSG00000019834) #32	DGKH (ENSMMSG00000020161) #33	ENSMMSG00000020326	AKAP11 (ENSMMSG00000020343) #34
Siberian musk deer	MODERN SPECIES	37													ENSMMSG00000005088	RUFY1 (ENSMMSG00000015267)	ENSMMSG00000015206	ENSMMSG00000015194 #22	CBY3 (ENSMMSG00000015178)	CANX (ENSMMSG00000015133)	MAML1 (ENSMMSG00000015102)	LTC4S (ENSMMSG00000015079)	MGAT4B (ENSMMSG00000015039)	SQSTM1 (ENSMMSG00000014995)	MRNIP (ENSMMSG00000014972)	TBC1D9B (ENSMMSG00000014868)	RNF130 (ENSMMSG00000014811)	ENSMMSG00000014794	RASGEF1C (ENSMMSG00000014739)	ENSMMSG00000014721	MAPK9 (ENSMMSG00000014591)	GFPT2 (ENSMMSG00000014477)	CNOT6 (ENSMMSG00000014444)
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	23	ENSCHYG00000015929	ENSCHYG00000016082	ENSCHYG00000016169	ENSCHYG00000016183	PCDH17 (ENSCHYG00000016204)	ENSCHYG00000016273	ENSCHYG00000016296	ENSCHYG00000016341	ENSCHYG00000016396	OLFM4 (ENSCHYG00000016456)	ENSCHYG00000016497	PCDH8 (ENSCHYG00000016544)	CNMD (ENSCHYG00000016613)	SUGT1 (ENSCHYG00000016730)	ELF1 (ENSCHYG00000016851) #21	ENSCHYG00000016947 #22	KBTBD6 (ENSCHYG00000017049) #23	KBTBD7 (ENSCHYG00000017098) #25	MTRF1 (ENSCHYG00000017123) #26	NAA16 (ENSCHYG00000017247) #29	ENSCHYG00000018532 #30	ENSCHYG00000018580 #31	ENSCHYG00000018641	VWA8 (ENSCHYG00000018691) #32	DGKH (ENSCHYG00000019526) #33	ENSCHYG00000020537	AKAP11 (ENSCHYG00000020568) #34	TNFSF11 (ENSCHYG00000020756) #35	FAM216B (ENSCHYG00000020887) #36	EPSTI1 (ENSCHYG00000020957) #37	DNAJC15 (ENSCHYG00000021166)
Yarkand deer	MODERN SPECIES	9	TAS2R16 (ENSCHYG00000026914)	SLC13A1 (ENSCHYG00000026920)	IQUB (ENSCHYG00000026931)	ENSCHYG00000026937	ASB15 (ENSCHYG00000026941)	WASL (ENSCHYG00000026946)	LMOD2 (ENSCHYG00000026950)	HYAL4 (ENSCHYG00000026955)	ENSCHYG00000026956	ENSCHYG00000026962	TMEM229A (ENSCHYG00000026977)	GPR37 (ENSCHYG00000026982)	POT1 (ENSCHYG00000026987)	GRM8 (ENSCHYG00000013536)	ZNF800 (ENSCHYG00000013697)	ENSCHYG00000013833 #22	GCC1 (ENSCHYG00000013864)	ARF5 (ENSCHYG00000013895)	FSCN3 (ENSCHYG00000013994)	PAX4 (ENSCHYG00000014112)	SND1 (ENSCHYG00000014315)	LRRC4 (ENSCHYG00000014918)	ENSCHYG00000014949	LEP (ENSCHYG00000014999)	RBM28 (ENSCHYG00000015085)	ENSCHYG00000015520	ENSCHYG00000015549	IMPDH1 (ENSCHYG00000015595)	ENSCHYG00000015886	GARIN1A (ENSCHYG00000015992)	GARIN1B (ENSCHYG00000016076)
Camelidae	ANCESTRAL SPECIES	14	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00910000148597	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143309	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000166099	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Arabian camel	MODERN SPECIES	5	ENSCDRG00005017273	ENSCDRG00005017248	PCDH20 (ENSCDRG00005017212)	ENSCDRG00005017199	TDRD3 (ENSCDRG00005017152)	DIAPH3 (ENSCDRG00005012389)	PCDH17 (ENSCDRG00005012113)	ENSCDRG00005012059	ENSCDRG00005012013	OLFM4 (ENSCDRG00005011913)	PCDH8 (ENSCDRG00005011868)	CNMD (ENSCDRG00005011783)	SUGT1 (ENSCDRG00005011660)	ENSCDRG00005011625	ELF1 (ENSCDRG00005011557) #21	WBP4 (ENSCDRG00005011462) #22	KBTBD6 (ENSCDRG00005011423) #23	KBTBD7 (ENSCDRG00005011400) #25	MTRF1 (ENSCDRG00005011325) #26	NAA16 (ENSCDRG00005010901) #29	RGCC (ENSCDRG00005010786) #31	VWA8 (ENSCDRG00005010578) #32	DGKH (ENSCDRG00005009915) #33	AKAP11 (ENSCDRG00005009691) #34	TNFSF11 (ENSCDRG00005009599) #35	FAM216B (ENSCDRG00005009565) #36	EPSTI1 (ENSCDRG00005009378) #37	DNAJC15 (ENSCDRG00005009304)	ENOX1 (ENSCDRG00005009033)	CCDC122 (ENSCDRG00005008954)	LACC1 (ENSCDRG00005008895)
Alpaca	MODERN SPECIES	1835														ENSVPAG00000002051	ELF1 (ENSVPAG00000002052) #21	WBP4 (ENSVPAG00000002053) #22	KBTBD6 (ENSVPAG00000002055) #23
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Carnivora	ANCESTRAL SPECIES	23	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00900000143309	ENSGT00950000185146	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Caniformia	ANCESTRAL SPECIES	24	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185064	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00900000143309	ENSGT00950000185146.d	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425.e.b	ENSGT00940000160425.e.a	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00950000185146.d	ENSGT00940000155454.j	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Ursidae	ANCESTRAL SPECIES	27	ENSGT00390000001134.a.a	ENSGT00940000160425.e.b	ENSGT00940000160425.f	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00950000185146.d	ENSGT00940000155454.j	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Ursus	ANCESTRAL SPECIES	62						ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454.j	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
American black bear	MODERN SPECIES	2227															ELF1 (ENSUAMG00000009839) #21	WBP4 (ENSUAMG00000009847) #22	KBTBD6 (ENSUAMG00000009849) #23
Polar bear	MODERN SPECIES	297					ENSUMAG00000014463	ENSUMAG00000014473	PCDH20 (ENSUMAG00000014497)	TDRD3 (ENSUMAG00000014526)	DIAPH3 (ENSUMAG00000014591)	PCDH17 (ENSUMAG00000014678)	OLFM4 (ENSUMAG00000014718)	ENSUMAG00000014724	CNMD (ENSUMAG00000014733)	SUGT1 (ENSUMAG00000014735)	ELF1 (ENSUMAG00000014744) #21	WBP4 (ENSUMAG00000014750) #22	KBTBD6 (ENSUMAG00000014753) #23	KBTBD7 (ENSUMAG00000014764) #25	MTRF1 (ENSUMAG00000014772) #26	NAA16 (ENSUMAG00000014778) #29	ENSUMAG00000014782 #31	VWA8 (ENSUMAG00000014915) #32	DGKH (ENSUMAG00000015512) #33	AKAP11 (ENSUMAG00000015963) #34	TNFSF11 (ENSUMAG00000015977) #35	FAM216B (ENSUMAG00000015984) #36	EPSTI1 (ENSUMAG00000016009) #37	ENSUMAG00000016020	DNAJC15 (ENSUMAG00000016026)	ENOX1 (ENSUMAG00000016041)	CCDC122 (ENSUMAG00000016081)
Giant Panda	MODERN SPECIES	17	ENSAMEG00000019011	ENSAMEG00000031424	ENSAMEG00000025349	PCDH9 (ENSAMEG00000019019)	PCDH20 (ENSAMEG00000000079)	ENSAMEG00000000080	TDRD3 (ENSAMEG00000000082)	DIAPH3 (ENSAMEG00000000086)	PCDH17 (ENSAMEG00000018131)	ENSAMEG00000025942	ENSAMEG00000008583	PCDH8 (ENSAMEG00000029609)	ENSAMEG00000008596	ENSAMEG00000008606	ENSAMEG00000008636 #21	WBP4 (ENSAMEG00000008668) #22	KBTBD6 (ENSAMEG00000018925) #23	KBTBD7 (ENSAMEG00000018934) #25	MTRF1 (ENSAMEG00000008696) #26	NAA16 (ENSAMEG00000008721) #29	RGCC (ENSAMEG00000023477) #31	VWA8 (ENSAMEG00000008732) #32	DGKH (ENSAMEG00000008800) #33	AKAP11 (ENSAMEG00000008857) #34	ENSAMEG00000023893 #35	FAM216B (ENSAMEG00000024062) #36	EPSTI1 (ENSAMEG00000016302) #37	DNAJC15 (ENSAMEG00000027146)	ENOX1 (ENSAMEG00000017297)	CCDC122 (ENSAMEG00000012979)	LACC1 (ENSAMEG00000012983)
Mustelinae	ANCESTRAL SPECIES	71					ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00950000185146.d	ENSGT00940000155454.j	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Ferret	MODERN SPECIES	232							ENSMPUG00000001921	ENSMPUG00000001911	OLFM4 (ENSMPUG00000001907)	ENSMPUG00000001900	ENSMPUG00000001897	PCDH8 (ENSMPUG00000001889)	CNMD (ENSMPUG00000001886)	SUGT1 (ENSMPUG00000001883)	ELF1 (ENSMPUG00000001881) #21	WBP4 (ENSMPUG00000001879) #22	KBTBD6 (ENSMPUG00000019416) #23	KBTBD7 (ENSMPUG00000001878) #25	MTRF1 (ENSMPUG00000001874) #26	NAA16 (ENSMPUG00000001871) #29	RGCC (ENSMPUG00000001865) #31	VWA8 (ENSMPUG00000001847) #32	ENSMPUG00000001845	DGKH (ENSMPUG00000001760) #33	AKAP11 (ENSMPUG00000001756) #34	ENSMPUG00000001755	TNFSF11 (ENSMPUG00000001717) #35	FAM216B (ENSMPUG00000001713) #36	EPSTI1 (ENSMPUG00000001709) #37	DNAJC15 (ENSMPUG00000001704)	ENOX1 (ENSMPUG00000001695)
American mink	MODERN SPECIES	193													CNMD (ENSNVIG00000001796)	SUGT1 (ENSNVIG00000001753)	ELF1 (ENSNVIG00000001703) #21	WBP4 (ENSNVIG00000001685) #22	KBTBD6 (ENSNVIG00000001665) #23	KBTBD7 (ENSNVIG00000001658) #25	RF1M (ENSNVIG00000001641) #26	ENSNVIG00000001628 #30	NAA16 (ENSNVIG00000001540) #29	RGCC (ENSNVIG00000001512) #31	VWA8 (ENSNVIG00000001438) #32	DGKH (ENSNVIG00000001217) #33	AKAP11 (ENSNVIG00000001185) #34	TNFSF11 (ENSNVIG00000001142) #35	FAM216B (ENSNVIG00000001108) #36	EPSTI1 (ENSNVIG00000001071) #37	DNAJC15 (ENSNVIG00000001037)	ENOX1 (ENSNVIG00000001013)	CCDC122 (ENSNVIG00000001005)
Canidae	ANCESTRAL SPECIES	38	ENSGT00940000154550.a.e.a.d.a.b	ENSGT00390000008902.i.a.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00900000143708	ENSGT00900000143309	ENSGT00950000185146.d	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Canis_lupus	ANCESTRAL SPECIES	35	ENSGT00940000154550.a.e.a.d.a.b	ENSGT00940000154640.a.a.a.e	ENSGT00390000008902.i.a.a.a.d	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00950000185300.c	ENSGT00940000156894	ENSGT00900000143708	ENSGT00900000143309	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000154205.h.wc.b	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Dingo	MODERN SPECIES	7	ENSCAFG00020018067	ENSCAFG00020018072	ENSCAFG00020018074	ENSCAFG00020018076	DIAPH3 (ENSCAFG00020018085)	ENSCAFG00020018106	ENSCAFG00020018107	PCDH17 (ENSCAFG00020018109)	ENSCAFG00020018112	ENSCAFG00020018121	OLFM4 (ENSCAFG00020018137)	PCDH8 (ENSCAFG00020018138)	CNMD (ENSCAFG00020018141)	SUGT1 (ENSCAFG00020018144)	ELF1 (ENSCAFG00020018152) #21	WBP4 (ENSCAFG00020018156) #22	KBTBD6 (ENSCAFG00020018170) #23	KBTBD7 (ENSCAFG00020018174) #25	ENSCAFG00020018176	MTRF1 (ENSCAFG00020018178) #26	ENSCAFG00020018183 #29	ENSCAFG00020018184 #29	RGCC (ENSCAFG00020018187) #31	VWA8 (ENSCAFG00020018227) #32	ENSCAFG00020018598	DGKH (ENSCAFG00020018605) #33	AKAP11 (ENSCAFG00020018682) #34	TNFSF11 (ENSCAFG00020018702) #35	FAM216B (ENSCAFG00020018715) #36	ENSCAFG00020018717 #37	DNAJC15 (ENSCAFG00020018719)
Dog	MODERN SPECIES	14	ENSCAFG00845020440	ENSCAFG00845020421	ENSCAFG00845020382	TDRD3 (ENSCAFG00845020184)	ENSCAFG00845019341	ENSCAFG00845019184	PCDH17 (ENSCAFG00845019099)	ENSCAFG00845019030	ENSCAFG00845013231	ENSCAFG00845013167	OLFM4 (ENSCAFG00845013112)	ENSCAFG00845013086	ENSCAFG00845013032	ENSCAFG00845013012	ELF1 (ENSCAFG00845012922) #21	WBP4 (ENSCAFG00845012821) #22	KBTBD6 (ENSCAFG00845012777) #23	ENSCAFG00845012746	MTRF1 (ENSCAFG00845012616) #26	NAA16 (ENSCAFG00845012159) #29	RGCC (ENSCAFG00845012012) #31	VWA8 (ENSCAFG00845011611) #32	ENSCAFG00845011514	DGKH (ENSCAFG00845010984) #33	AKAP11 (ENSCAFG00845010732) #34	TNFSF11 (ENSCAFG00845010618) #35	FAM216B (ENSCAFG00845010557) #36	ENSCAFG00845010306 #37	DNAJC15 (ENSCAFG00845010203)	ENOX1 (ENSCAFG00845010105)	CCDC122 (ENSCAFG00845010070)
Red fox	MODERN SPECIES	78	TDRD3 (ENSVVUG00000029140)	DIAPH3 (ENSVVUG00000028837)	ENSVVUG00000028816	PCDH17 (ENSVVUG00000028814)	ENSVVUG00000028813	ENSVVUG00000028807	ENSVVUG00000028805	ENSVVUG00000028804	ENSVVUG00000028792	ENSVVUG00000028790	OLFM4 (ENSVVUG00000028777)	PCDH8 (ENSVVUG00000028776)	CNMD (ENSVVUG00000028772)	SUGT1 (ENSVVUG00000028767)	ELF1 (ENSVVUG00000028763) #21	WBP4 (ENSVVUG00000028761) #22	KBTBD6 (ENSVVUG00000028760) #23	ENSVVUG00000028758 ##25	ENSVVUG00000028757	MTRF1 (ENSVVUG00000028755) #26	NAA16 (ENSVVUG00000028743) #29	ENSVVUG00000028742 #31	VWA8 (ENSVVUG00000028708) #32	DGKH (ENSVVUG00000028597) #33	AKAP11 (ENSVVUG00000028556) #34	TNFSF11 (ENSVVUG00000028544) #35	FAM216B (ENSVVUG00000028542) #36	ENSVVUG00000028538	ENSVVUG00000028527	ENSVVUG00000028523	ENOX1 (ENSVVUG00000028503)
Felidae	ANCESTRAL SPECIES	23	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000157455.b.b.a	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130
Panthera	ANCESTRAL SPECIES	21	ENSGT00940000160425	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000157455.b.b.a	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00980000200292	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000006696.db
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00940000160425	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000157455.b.b.a	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00980000200292	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00550000076230 #30	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000006696.db
lion	MODERN SPECIES	1	ENSPLOG00000010777	ENSPLOG00000010804	PCDH9 (ENSPLOG00000010834)	ENSPLOG00000010944	PCDH20 (ENSPLOG00000010988)	TDRD3 (ENSPLOG00000011058)	DIAPH3 (ENSPLOG00000011292)	ENSPLOG00000012042	ENSPLOG00000012058	PCDH17 (ENSPLOG00000012087)	OLFM4 (ENSPLOG00000012216)	PCDH8 (ENSPLOG00000012248)	CNMD (ENSPLOG00000012326)	SUGT1 (ENSPLOG00000012464)	ELF1 (ENSPLOG00000012608) #21	WBP4 (ENSPLOG00000012662) #22	KBTBD6 (ENSPLOG00000012750) #23	KBTBD7 (ENSPLOG00000012777) #25	MTRF1 (ENSPLOG00000012808) #26	NAA16 (ENSPLOG00000013005) #29	RGCC (ENSPLOG00000013395) #31	VWA8 (ENSPLOG00000013476) #32	DGKH (ENSPLOG00000013638) #33	AKAP11 (ENSPLOG00000013869) #34	TNFSF11 (ENSPLOG00000013952) #35	FAM216B (ENSPLOG00000014067) #36	EPSTI1 (ENSPLOG00000014127) #37	DNAJC15 (ENSPLOG00000014175)	ENOX1 (ENSPLOG00000014204)	ENSPLOG00000014335	CCDC122 (ENSPLOG00000014352)
leopard	MODERN SPECIES	14									ENSPPRG00000013617	OLFM4 (ENSPPRG00000013541)	ENSPPRG00000013420	PCDH8 (ENSPPRG00000013087)	CNMD (ENSPPRG00000012553)	SUGT1 (ENSPPRG00000011927)	ELF1 (ENSPPRG00000010166) #21	WBP4 (ENSPPRG00000009978) #22	KBTBD6 (ENSPPRG00000009810) #23	KBTBD7 (ENSPPRG00000017314) #25	MTRF1 (ENSPPRG00000009511) #26	NAA16 (ENSPPRG00000008553) #29	ENSPPRG00000017124 #30	ENSPPRG00000017108 #30	RGCC (ENSPPRG00000007126) #31	VWA8 (ENSPPRG00000006962) #32	DGKH (ENSPPRG00000003603) #33	AKAP11 (ENSPPRG00000000675) #34	TNFSF11 (ENSPPRG00000000387) #35	FAM216B (ENSPPRG00000022155) #36	EPSTI1 (ENSPPRG00000020685) #37	DNAJC15 (ENSPPRG00000017077)	ENOX1 (ENSPPRG00000016584)
Tiger	MODERN SPECIES	221									ENSPTIG00000005868	PCDH17 (ENSPTIG00000020639)	OLFM4 (ENSPTIG00000020774)	ENSPTIG00000021180	CNMD (ENSPTIG00000021297)	SUGT1 (ENSPTIG00000021452)	ELF1 (ENSPTIG00000021757) #21	WBP4 (ENSPTIG00000003187) #22	KBTBD7 (ENSPTIG00000005920) #25	MTRF1 (ENSPTIG00000006673) #26	NAA16 (ENSPTIG00000007921) #29	ENSPTIG00000005941 #30	VWA8 (ENSPTIG00000011005) #32	DGKH (ENSPTIG00000016136) #33	AKAP11 (ENSPTIG00000004721) #34	TNFSF11 (ENSPTIG00000007595) #35	FAM216B (ENSPTIG00000010708) #36	EPSTI1 (ENSPTIG00000011254) #37	DNAJC15 (ENSPTIG00000013715)	ENOX1 (ENSPTIG00000014489)	ENSPTIG00000006302	CCDC122 (ENSPTIG00000015450)	LACC1 (ENSPTIG00000016230)
Cat	MODERN SPECIES		KLHL1 (ENSFCAG00000004830)	ENSFCAG00000023806	ENSFCAG00000036681	PCDH9 (ENSFCAG00000013764)	PCDH20 (ENSFCAG00000024165)	TDRD3 (ENSFCAG00000022126)	DIAPH3 (ENSFCAG00000027832)	ENSFCAG00000053374	PCDH17 (ENSFCAG00000024553)	ENSFCAG00000035797	OLFM4 (ENSFCAG00000031021)	PCDH8 (ENSFCAG00000010132)	CNMD (ENSFCAG00000010131)	SUGT1 (ENSFCAG00000005544)	ELF1 (ENSFCAG00000029010) #21	WBP4 (ENSFCAG00000035581) #22	KBTBD6 (ENSFCAG00000034478) #23	KBTBD7 (ENSFCAG00000006263) #25	MTRF1 (ENSFCAG00000031635) #26	NAA16 (ENSFCAG00000007219) #29	RGCC (ENSFCAG00000038293) #31	VWA8 (ENSFCAG00000005291) #32	DGKH (ENSFCAG00000005292) #33	AKAP11 (ENSFCAG00000005913) #34	TNFSF11 (ENSFCAG00000005912) #35	FAM216B (ENSFCAG00000039318) #36	EPSTI1 (ENSFCAG00000030356) #37	DNAJC15 (ENSFCAG00000022632)	ENOX1 (ENSFCAG00000010984)	CCDC122 (ENSFCAG00000025660)	LACC1 (ENSFCAG00000043479)
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Chiroptera	ANCESTRAL SPECIES	39	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Microchiroptera	ANCESTRAL SPECIES	40	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Greater horseshoe bat	MODERN SPECIES	22	ENSRFEG00010001352	ENSRFEG00010001336	PCDH9 (ENSRFEG00010001289)	ENSRFEG00010001244	PCDH20 (ENSRFEG00010001210)	TDRD3 (ENSRFEG00010001175)	DIAPH3 (ENSRFEG00010000605)	ENSRFEG00010000334	PCDH17 (ENSRFEG00010000323)	ENSRFEG00010000303	OLFM4 (ENSRFEG00010000281)	PCDH8 (ENSRFEG00010000264)	CNMD (ENSRFEG00010000232)	SUGT1 (ENSRFEG00010000205)	ELF1 (ENSRFEG00010000181) #21	WBP4 (ENSRFEG00010018932) #22	KBTBD6 (ENSRFEG00010018916) #23	ENSRFEG00010018883	KBTBD7 (ENSRFEG00010018870) #25	MTRF1 (ENSRFEG00010018838) #26	NAA16 (ENSRFEG00010018490) #29	RGCC (ENSRFEG00010018401) #31	VWA8 (ENSRFEG00010017755) #32	DGKH (ENSRFEG00010016960) #33	AKAP11 (ENSRFEG00010016903) #34	TNFSF11 (ENSRFEG00010016778) #35	FAM216B (ENSRFEG00010016757) #36	EPSTI1 (ENSRFEG00010016685) #37	DNAJC15 (ENSRFEG00010016645)	ENOX1 (ENSRFEG00010016570)	CCDC122 (ENSRFEG00010016478)
Microbat	MODERN SPECIES	944											OLFM4 (ENSMLUG00000013957)	PCDH8 (ENSMLUG00000005370)	CNMD (ENSMLUG00000017234)	SUGT1 (ENSMLUG00000017229)	ELF1 (ENSMLUG00000001854) #21	WBP4 (ENSMLUG00000001855) #22	KBTBD6 (ENSMLUG00000017068) #23	KBTBD7 (ENSMLUG00000029916) #25	MTRF1 (ENSMLUG00000017237) #26	NAA16 (ENSMLUG00000004194) #29	ENSMLUG00000009482	RGCC (ENSMLUG00000000695) #31	VWA8 (ENSMLUG00000015361) #32	DGKH (ENSMLUG00000016820) #33	AKAP11 (ENSMLUG00000026426) #34	TNFSF11 (ENSMLUG00000008819) #35	FAM216B (ENSMLUG00000012282) #36	ENSMLUG00000015553 #37	DNAJC15 (ENSMLUG00000008684)	ENOX1 (ENSMLUG00000000802)	CCDC122 (ENSMLUG00000009121)
Megabat	MODERN SPECIES	2125														ENSPVAG00000014631	ELF1 (ENSPVAG00000014633) #21	WBP4 (ENSPVAG00000014634) #22
Equus	ANCESTRAL SPECIES	26	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000160882.e	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.A #25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Donkey	MODERN SPECIES	2	KLHL1 (ENSEASG00005015558)	ENSEASG00005015563	PCDH9 (ENSEASG00005015567)	ENSEASG00005015569	ENSEASG00005015571	PCDH20 (ENSEASG00005028627)	TDRD3 (ENSEASG00005015575)	DIAPH3 (ENSEASG00005015584)	PCDH17 (ENSEASG00005015677)	ENSEASG00005037270	OLFM4 (ENSEASG00005034164)	PCDH8 (ENSEASG00005015694)	CNMD (ENSEASG00005015700)	ENSEASG00005015702	ENSEASG00005015703 #21	ENSEASG00005015706 #22	KBTBD6 (ENSEASG00005036527) #23	KBTBD7 (ENSEASG00005015712) #25	MTRF1 (ENSEASG00005015715) #26	ENSEASG00005015756 #29	ENSEASG00005035563 #29	RGCC (ENSEASG00005035316) #31	VWA8 (ENSEASG00005016214) #32	DGKH (ENSEASG00005016872) #33	AKAP11 (ENSEASG00005016987) #34	TNFSF11 (ENSEASG00005025411) #35	FAM216B (ENSEASG00005016998) #36	EPSTI1 (ENSEASG00005017003) #37	ENSEASG00005033429	DNAJC15 (ENSEASG00005027017)	ENOX1 (ENSEASG00005017017)
Horse	MODERN SPECIES	8	ENSECAG00000004787	TDRD3 (ENSECAG00000000550)	DIAPH3 (ENSECAG00000019161)	ENSECAG00000038550	PCDH17 (ENSECAG00000017321)	ENSECAG00000036793	ENSECAG00000053922	ENSECAG00000014035	ENSECAG00000028608	OLFM4 (ENSECAG00000010860)	PCDH8 (ENSECAG00000024090)	ENSECAG00000034043	SUGT1 (ENSECAG00000012999)	CNMD (ENSECAG00000019524)	ELF1 (ENSECAG00000024604) #21	WBP4 (ENSECAG00000021033) #22	KBTBD6 (ENSECAG00000001410) #23	ENSECAG00000045437	KBTBD7 (ENSECAG00000001308) #25	MTRF1 (ENSECAG00000014389) #26	NAA16 (ENSECAG00000015497) #29	RGCC (ENSECAG00000013151) #31	ENSECAG00000050128	ENSECAG00000045148	VWA8 (ENSECAG00000006748) #32	DGKH (ENSECAG00000000237) #33	AKAP11 (ENSECAG00000021005) #34	TNFSF11 (ENSECAG00000016559) #35	FAM216B (ENSECAG00000015189) #36	ENSECAG00000050320	ENSECAG00000033495
Atlantogenata	ANCESTRAL SPECIES	27					ENSGT00940000155079.b	ENSGT01100000267130	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.C ##25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Xenarthra	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Sloth	MODERN SPECIES	1843																ENSCHOG00000009432 #22
Armadillo	MODERN SPECIES	1972			PCDH20 (ENSDNOG00000040232)	TDRD3 (ENSDNOG00000002011)	DIAPH3 (ENSDNOG00000015042)	PCDH17 (ENSDNOG00000031265)	ENSDNOG00000044136	ENSDNOG00000032912	ENSDNOG00000018891	PCDH8 (ENSDNOG00000049263)	CNMD (ENSDNOG00000002992)	SUGT1 (ENSDNOG00000002991)	ELF1 (ENSDNOG00000011236) #21	ENSDNOG00000030716	ENSDNOG00000038203	WBP4 (ENSDNOG00000046013) #22	ENSDNOG00000049006	ENSDNOG00000010598 ##25	MTRF1 (ENSDNOG00000034196) #26	NAA16 (ENSDNOG00000004473) #29
Afrotheria	ANCESTRAL SPECIES	54						ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.C ##25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Afrotheria_a	ANCESTRAL SPECIES	52						ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000155175.B #23	ENSGT00940000155175.C ##25	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512.a #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Elephant	MODERN SPECIES	239	PCDH9 (ENSLAFG00000029953)	ENSLAFG00000025700	ENSLAFG00000027452	ENSLAFG00000030868	ENSLAFG00000030478	ENSLAFG00000027466	PCDH20 (ENSLAFG00000031335)	TDRD3 (ENSLAFG00000002705)	DIAPH3 (ENSLAFG00000008135)	PCDH17 (ENSLAFG00000002377)	OLFM4 (ENSLAFG00000018242)	PCDH8 (ENSLAFG00000012913)	CNMD (ENSLAFG00000018396)	SUGT1 (ENSLAFG00000009157)	ELF1 (ENSLAFG00000032117) #21	WBP4 (ENSLAFG00000005901) #22	KBTBD6 (ENSLAFG00000009917) #23	ENSLAFG00000017831 ##25	ENSLAFG00000022177 #26	ENSLAFG00000031338	NAA16 (ENSLAFG00000003231) #29	RGCC (ENSLAFG00000003234) #31	VWA8 (ENSLAFG00000007982) #32	ENSLAFG00000025669	DGKH (ENSLAFG00000009623) #33	ENSLAFG00000005777 #34	ENSLAFG00000029763 #34	TNFSF11 (ENSLAFG00000011256) #35	FAM216B (ENSLAFG00000032301) #36	EPSTI1 (ENSLAFG00000016838) #37	DNAJC15 (ENSLAFG00000004343)
Tenrec	MODERN SPECIES	2042																WBP4 (ENSETEG00000011225) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000160425	ENSGT00940000153064.b.b.a.b	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000157843	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000157843	ENSGT00900000143582	ENSGT00940000156894	ENSGT00940000153700.jc.a.a.b	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Diprotodontia	ANCESTRAL SPECIES	31											ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Diprotodontia_a	DUPLICATION
Diprotodontia_a	ANCESTRAL SPECIES	30											ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956.a #22	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Common wonbat	MODERN SPECIES	1038								ENSVURG00010009695	ENSVURG00010009692	ENSVURG00010009690	ENSVURG00010009679	PCDH8 (ENSVURG00010009669)	CNMD (ENSVURG00010009659)	SUGT1 (ENSVURG00010009644)	ELF1 (ENSVURG00010009633) #21	ENSVURG00010009621 #22	ENSVURG00010009611	MTRF1 (ENSVURG00010009603) #26	ENSVURG00010009596	ENSVURG00010009594 #29	ENSVURG00010009585 #29	RGCC (ENSVURG00010009578) #31	VWA8 (ENSVURG00010009546) #32	DGKH (ENSVURG00010009526) #33	AKAP11 (ENSVURG00010009504) #34	TNFSF11 (ENSVURG00010009490) #35	EPSTI1 (ENSVURG00010009463) #37	DNAJC15 (ENSVURG00010009445)	ENOX1 (ENSVURG00010009418)	CCDC122 (ENSVURG00010009366)	LACC1 (ENSVURG00010009356)
koala	MODERN SPECIES	307										ENSPCIG00000018583	OLFM4 (ENSPCIG00000036054)	PCDH8 (ENSPCIG00000012919)	CNMD (ENSPCIG00000012920)	SUGT1 (ENSPCIG00000012922)	ELF1 (ENSPCIG00000012932) #21	ENSPCIG00000012936 #22	ENSPCIG00000035197	ENSPCIG00000012938	MTRF1 (ENSPCIG00000012940) #26	ENSPCIG00000012948 #29	ENSPCIG00000034063 #29	RGCC (ENSPCIG00000012956) #31	VWA8 (ENSPCIG00000012960) #32	DGKH (ENSPCIG00000012983) #33	AKAP11 (ENSPCIG00000013002) #34	TNFSF11 (ENSPCIG00000018741) #35
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00390000013956.b #22
Common wonbat	MODERN SPECIES	241																ENSVURG00010002690 #22
koala	MODERN SPECIES	212												ZNF385D (ENSPCIG00000035897)	ENSPCIG00000023929	ENSPCIG00000023932	ENSPCIG00000023933	ENSPCIG00000026104 #22	UBE2E1 (ENSPCIG00000026105)	NKIRAS1 (ENSPCIG00000026106)	ENSPCIG00000026107	NR1D2 (ENSPCIG00000026108)	THRB (ENSPCIG00000026110)	RARB (ENSPCIG00000008578)	TOP2B (ENSPCIG00000008674)	NGLY1 (ENSPCIG00000010936)	ENSPCIG00000036789	ENSPCIG00000010937
Wallaby	MODERN SPECIES	2910																WBP4 (ENSMEUG00000015983) #22
Tasmanian devil	MODERN SPECIES	2	TDRD3 (ENSSHAG00000011994)	ENSSHAG00000029149	DIAPH3 (ENSSHAG00000014221)	ENSSHAG00000020824	ENSSHAG00000015066	ENSSHAG00000029234	PCDH17 (ENSSHAG00000030397)	ENSSHAG00000031334	ENSSHAG00000011884	ENSSHAG00000030587	OLFM4 (ENSSHAG00000017198)	PCDH8 (ENSSHAG00000024494)	ENSSHAG00000021232	ENSSHAG00000027194	ENSSHAG00000017887 #21	WBP4 (ENSSHAG00000018027) #22	ENSSHAG00000023806	MTRF1 (ENSSHAG00000018109) #26	NAA16 (ENSSHAG00000018196) #29	RGCC (ENSSHAG00000029520) #31	VWA8 (ENSSHAG00000027337) #32	ENSSHAG00000022714	DGKH (ENSSHAG00000001014) #33	AKAP11 (ENSSHAG00000022883) #34	TNFSF11 (ENSSHAG00000001297) #35	ENSSHAG00000010849 #37	DNAJC15 (ENSSHAG00000011722)	ENOX1 (ENSSHAG00000012702)	CCDC122 (ENSSHAG00000022118)	ENSSHAG00000015643	ENSSHAG00000023950
Opossum	MODERN SPECIES	6	HDAC8 (ENSMODG00000024915)	PCDH17 (ENSMODG00000006409)	ENSMODG00000006412	ENSMODG00000044149	ENSMODG00000048827	ENSMODG00000028702	ENSMODG00000044832	ENSMODG00000046257	ENSMODG00000024964	ENSMODG00000014727	OLFM4 (ENSMODG00000047878)	PCDH8 (ENSMODG00000014739)	CNMD (ENSMODG00000014743)	SUGT1 (ENSMODG00000014748)	ELF1 (ENSMODG00000014756) #21	WBP4 (ENSMODG00000014761) #22	ENSMODG00000045233	ENSMODG00000050131	MTRF1 (ENSMODG00000014772) #26	NAA16 (ENSMODG00000014799) #29	RGCC (ENSMODG00000014805) #31	VWA8 (ENSMODG00000014823) #32	ENSMODG00000046520	DGKH (ENSMODG00000014844) #33	AKAP11 (ENSMODG00000014848) #34	ENSMODG00000046331	ENSMODG00000051302	ENSMODG00000024949	TNFSF11 (ENSMODG00000014856) #35	ENSMODG00000042637	ENSMODG00000025483 #37
Platypus	MODERN SPECIES	11	ENSOANG00000009455	ENSOANG00000020115	PCDH20 (ENSOANG00000015235)	ENSOANG00000038658	TDRD3 (ENSOANG00000011775)	DIAPH3 (ENSOANG00000006997)	ENSOANG00000038739	PCDH17 (ENSOANG00000041426)	ENSOANG00000016066	ENSOANG00000039527	OLFM4 (ENSOANG00000037547)	ENSOANG00000048430	CNMD (ENSOANG00000010093)	SUGT1 (ENSOANG00000020356)	ELF1 (ENSOANG00000013391) #21	WBP4 (ENSOANG00000039659) #22	ENSOANG00000042040	ENSOANG00000050275	MTRF1 (ENSOANG00000003383) #26	CNOT11 (ENSOANG00000013148)	RNF149 (ENSOANG00000003086)	ENSOANG00000002853	ENSOANG00000016016	MAP4K4 (ENSOANG00000008236)	IL1R2 (ENSOANG00000008234)	IL1R1 (ENSOANG00000011165)	ENSOANG00000014837	ENSOANG00000011164	ENSOANG00000044038	ENSOANG00000012240	SLC9A4 (ENSOANG00000012242)
Sauria	ANCESTRAL SPECIES	2	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Archelosauria	ANCESTRAL SPECIES		ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Archosauria	ANCESTRAL SPECIES	2	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647	ENSGT00940000166021
Aves	ANCESTRAL SPECIES		ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758
Neognathae_b	ANCESTRAL SPECIES		ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000166021	ENSGT00390000003758	ENSGT00940000163575
Golden eagle	MODERN SPECIES	5	MZT1 (ENSACCG00020014862)	DACH1 (ENSACCG00020014890)	KLHL1 (ENSACCG00020014928)	ENSACCG00020014977	ENSACCG00020014983	PCDH20 (ENSACCG00020014993)	TDRD3 (ENSACCG00020015002)	DIAPH3 (ENSACCG00020015052)	ENSACCG00020015112	PCDH17 (ENSACCG00020015125)	OLFM4 (ENSACCG00020015144)	PCDH8 (ENSACCG00020015161)	CNMD (ENSACCG00020015177)	SUGT1 (ENSACCG00020015201)	ELF1 (ENSACCG00020015224) #21	WBP4 (ENSACCG00020015243) #22	MTRF1 (ENSACCG00020015274) #26	ENSACCG00020015285	NAA16 (ENSACCG00020015320) #29	RGCC (ENSACCG00020015343) #31	VWA8 (ENSACCG00020015386) #32	DGKH (ENSACCG00020015448) #33	AKAP11 (ENSACCG00020015487) #34	TNFSF11 (ENSACCG00020015505) #35	ENSACCG00020015518 #37	DNAJC15 (ENSACCG00020015524)	ENOX1 (ENSACCG00020015543)	CCDC122 (ENSACCG00020015565)	LACC1 (ENSACCG00020015577)	ENSACCG00020015612	NUFIP1 (ENSACCG00020015631)
Kakapo	MODERN SPECIES	11	ENSSHBG00005003822	ENSSHBG00005003834	ENSSHBG00005003843	ENSSHBG00005003849	PCDH20 (ENSSHBG00005003855)	TDRD3 (ENSSHBG00005003863)	DIAPH3 (ENSSHBG00005003891)	ENSSHBG00005003924	ENSSHBG00005003943	PCDH17 (ENSSHBG00005003958)	OLFM4 (ENSSHBG00005003996)	PCDH8 (ENSSHBG00005004003)	CNMD (ENSSHBG00005004010)	SUGT1 (ENSSHBG00005004023)	ELF1 (ENSSHBG00005004033) #21	WBP4 (ENSSHBG00005004096) #22	MTRF1 (ENSSHBG00005004118) #26	NAA16 (ENSSHBG00005004130) #29	RGCC (ENSSHBG00005004142) #31	VWA8 (ENSSHBG00005004472) #32	DGKH (ENSSHBG00005007915) #33	AKAP11 (ENSSHBG00005007930) #34	TNFSF11 (ENSSHBG00005007943) #35	DNAJC15 (ENSSHBG00005007958)	ENOX1 (ENSSHBG00005007972)	CCDC122 (ENSSHBG00005007991)	LACC1 (ENSSHBG00005008008)	ENSSHBG00005008015	ENSSHBG00005008048	NUFIP1 (ENSSHBG00005008070)	GPALPP1 (ENSSHBG00005008087)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT01030000237957	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT01030000237957	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907.t	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT01030000237957	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907.t	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Medium ground finch	MODERN SPECIES	25										ENSGFOG00000011420	OLFM4 (ENSGFOG00000011424)	PCDH8 (ENSGFOG00000011427)	CNMD (ENSGFOG00000011432)	SUGT1 (ENSGFOG00000011441)	ELF1 (ENSGFOG00000011454) #21	WBP4 (ENSGFOG00000011468) #22	MTRF1 (ENSGFOG00000011488) #26	NAA16 (ENSGFOG00000011498) #29	VWA8 (ENSGFOG00000011517) #32	DGKH (ENSGFOG00000011568) #33	AKAP11 (ENSGFOG00000011744) #34	TNFSF11 (ENSGFOG00000011755) #35	DNAJC15 (ENSGFOG00000011773)	ENOX1 (ENSGFOG00000011780)	CCDC122 (ENSGFOG00000011793)	LACC1 (ENSGFOG00000011807)	ENSGFOG00000011814	ENSGFOG00000011822	NUFIP1 (ENSGFOG00000011829)	GPALPP1 (ENSGFOG00000011840)	GTF2F2 (ENSGFOG00000011848)
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT01030000237957	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907.t	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Zebra finch	MODERN SPECIES		DACH1 (ENSTGUG00000012492)	ENSTGUG00000027227	KLHL1 (ENSTGUG00000012487)	PCDH9 (ENSTGUG00000012486)	PCDH20 (ENSTGUG00000012481)	TDRD3 (ENSTGUG00000012476)	DIAPH3 (ENSTGUG00000012460)	ENSTGUG00000026039	PCDH17 (ENSTGUG00000012457)	ENSTGUG00000028083	OLFM4 (ENSTGUG00000025069)	PCDH8 (ENSTGUG00000012453)	CNMD (ENSTGUG00000012448)	SUGT1 (ENSTGUG00000024443)	ELF1 (ENSTGUG00000012438) #21	WBP4 (ENSTGUG00000023820) #22	MTRF1 (ENSTGUG00000012422) #26	ENSTGUG00000023056	NAA16 (ENSTGUG00000012418) #29	VWA8 (ENSTGUG00000012398) #32	DGKH (ENSTGUG00000012377) #33	AKAP11 (ENSTGUG00000018872) #34	TNFSF11 (ENSTGUG00000025888) #35	EPSTI1 (ENSTGUG00000012366) #37	ENSTGUG00000024533	ENOX1 (ENSTGUG00000012357)	CCDC122 (ENSTGUG00000022901)	LACC1 (ENSTGUG00000012353)	ENSTGUG00000028881	NUFIP1 (ENSTGUG00000012321)	GPALPP1 (ENSTGUG00000012338)
Common canary	MODERN SPECIES	4	MZT1 (ENSSCAG00000015098)	DACH1 (ENSSCAG00000015087)	ENSSCAG00000015072	ENSSCAG00000015057	ENSSCAG00000015047	PCDH20 (ENSSCAG00000015037)	TDRD3 (ENSSCAG00000015022)	DIAPH3 (ENSSCAG00000014569)	ENSSCAG00000014460	PCDH17 (ENSSCAG00000014457)	OLFM4 (ENSSCAG00000014453)	PCDH8 (ENSSCAG00000014451)	CNMD (ENSSCAG00000014448)	SUGT1 (ENSSCAG00000014446)	ELF1 (ENSSCAG00000014441) #21	WBP4 (ENSSCAG00000014439) #22	MTRF1 (ENSSCAG00000014435) #26	NAA16 (ENSSCAG00000014433) #29	RGCC (ENSSCAG00000014431) #31	VWA8 (ENSSCAG00000014421) #32	DGKH (ENSSCAG00000013975) #33	AKAP11 (ENSSCAG00000013822) #34	TNFSF11 (ENSSCAG00000013817) #35	ENSSCAG00000013809	DNAJC15 (ENSSCAG00000013807)	ENOX1 (ENSSCAG00000013800)	CCDC122 (ENSSCAG00000013780)	LACC1 (ENSSCAG00000013774)	ENSSCAG00000013770	ENSSCAG00000013767	NUFIP1 (ENSSCAG00000013762)
Flycatcher	MODERN SPECIES		ENSFALG00000026045	ENSFALG00000014794	ENSFALG00000014833	PCDH20 (ENSFALG00000014411)	TDRD3 (ENSFALG00000007927)	DIAPH3 (ENSFALG00000007940)	ENSFALG00000025639	PCDH17 (ENSFALG00000007975)	ENSFALG00000028139	OLFM4 (ENSFALG00000007977)	PCDH8 (ENSFALG00000007982)	CNMD (ENSFALG00000025412)	SUGT1 (ENSFALG00000022997)	ENSFALG00000026658	ELF1 (ENSFALG00000008008) #21	WBP4 (ENSFALG00000008022) #22	MTRF1 (ENSFALG00000008036) #26	ENSFALG00000028279	NAA16 (ENSFALG00000008048) #29	RGCC (ENSFALG00000027799) #31	ENSFALG00000024593	VWA8 (ENSFALG00000008073) #32	DGKH (ENSFALG00000008106) #33	AKAP11 (ENSFALG00000028283) #34	TNFSF11 (ENSFALG00000027225) #35	EPSTI1 (ENSFALG00000008123) #37	DNAJC15 (ENSFALG00000028222)	ENOX1 (ENSFALG00000008134)	CCDC122 (ENSFALG00000026793)	LACC1 (ENSFALG00000008143)	TSC22D1 (ENSFALG00000008145)
Great tit	MODERN SPECIES		KLHL1 (ENSPMJG00000013718)	ENSPMJG00000013722	ENSPMJG00000013757	ENSPMJG00000013786	ENSPMJG00000013806	PCDH20 (ENSPMJG00000013836)	TDRD3 (ENSPMJG00000013853)	DIAPH3 (ENSPMJG00000013874)	ENSPMJG00000014859	PCDH17 (ENSPMJG00000014860)	OLFM4 (ENSPMJG00000014868)	PCDH8 (ENSPMJG00000014869)	CNMD (ENSPMJG00000014870)	SUGT1 (ENSPMJG00000014871)	ELF1 (ENSPMJG00000014872) #21	WBP4 (ENSPMJG00000014873) #22	MTRF1 (ENSPMJG00000014874) #26	ENSPMJG00000014875	NAA16 (ENSPMJG00000014876) #29	RGCC (ENSPMJG00000014877) #31	VWA8 (ENSPMJG00000014878) #32	DGKH (ENSPMJG00000014879) #33	AKAP11 (ENSPMJG00000014880) #34	TNFSF11 (ENSPMJG00000014883) #35	EPSTI1 (ENSPMJG00000014885) #37	DNAJC15 (ENSPMJG00000014886)	ENOX1 (ENSPMJG00000014887)	CCDC122 (ENSPMJG00000014888)	LACC1 (ENSPMJG00000014889)	ENSPMJG00000014893	ENSPMJG00000014894
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT01090000261481	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Anatidae	ANCESTRAL SPECIES	16					ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT01090000261481	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000166021	ENSGT00390000003758
Pink-footed goose	MODERN SPECIES	86											OLFM4 (ENSABRG00000003627)	PCDH8 (ENSABRG00000003637)	CNMD (ENSABRG00000003647)	SUGT1 (ENSABRG00000003660)	ELF1 (ENSABRG00000003673) #21	WBP4 (ENSABRG00000003700) #22	MTRF1 (ENSABRG00000003716) #26	NAA16 (ENSABRG00000003737) #29	RGCC (ENSABRG00000003765) #31	VWA8 (ENSABRG00000003780) #32	DGKH (ENSABRG00000003834) #33	AKAP11 (ENSABRG00000003947) #34	TNFSF11 (ENSABRG00000003983) #35	EPSTI1 (ENSABRG00000003988) #37	DNAJC15 (ENSABRG00000004012)	ENOX1 (ENSABRG00000004056)	LACC1 (ENSABRG00000004118)	CCDC122 (ENSABRG00000004125)	ENSABRG00000004172
Duck	MODERN SPECIES		ENSAPLG00000028287	ENSAPLG00000001157	ENSAPLG00000026299	ENSAPLG00000001142	ENSAPLG00000030357	PCDH20 (ENSAPLG00000001315)	TDRD3 (ENSAPLG00000014316)	DIAPH3 (ENSAPLG00000013619)	ENSAPLG00000024312	PCDH17 (ENSAPLG00000014071)	OLFM4 (ENSAPLG00000028342)	PCDH8 (ENSAPLG00000027530)	CNMD (ENSAPLG00000024638)	SUGT1 (ENSAPLG00000007765)	ELF1 (ENSAPLG00000008134) #21	WBP4 (ENSAPLG00000009035) #22	NAA16 (ENSAPLG00000009514) #29	RGCC (ENSAPLG00000009930) #31	VWA8 (ENSAPLG00000010804) #32	DGKH (ENSAPLG00000011129) #33	AKAP11 (ENSAPLG00000016841) #34	TNFSF11 (ENSAPLG00000005413) #35	ENSAPLG00000005407	EPSTI1 (ENSAPLG00000005382) #37	ENSAPLG00000025751	ENOX1 (ENSAPLG00000005204)	KLHL1 (ENSAPLG00000002429)	DACH1 (ENSAPLG00000012935)	MZT1 (ENSAPLG00000021793)	BORA (ENSAPLG00000012807)	DIS3 (ENSAPLG00000012686)
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b.yc.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT01090000261481	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b.yc.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT01090000261481	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Chicken	MODERN SPECIES		BORA (ENSGALG00010000859)	MZT1 (ENSGALG00010000864)	DACH1 (ENSGALG00010000870)	KLHL1 (ENSGALG00010000876)	PCDH9 (ENSGALG00010000901)	PCDH20 (ENSGALG00010000715)	TDRD3 (ENSGALG00010002381)	DIAPH3 (ENSGALG00010002406)	ENSGALG00010002412	PCDH17 (ENSGALG00010002415)	OLFM4 (ENSGALG00010002967)	PCDH8 (ENSGALG00010002987)	LECT1 (ENSGALG00010002998)	SUGT1 (ENSGALG00010003024)	ELF1 (ENSGALG00010003072) #21	WBP4 (ENSGALG00010003113) #22	MTRF1 (ENSGALG00010003169) #26	NAA16 (ENSGALG00010003183) #29	RGCC (ENSGALG00010003192) #31	VWA8 (ENSGALG00010003246) #32	DGKH (ENSGALG00010003254) #33	AKAP11 (ENSGALG00010003271) #34	TNFSF11 (ENSGALG00010003276) #35	ENSGALG00010003283	ENSGALG00010003293	EPSTI1 (ENSGALG00010003331) #37	DNAJC15 (ENSGALG00010003358)	ENOX1 (ENSGALG00010003372)	LACC1 (ENSGALG00010003432)	CCDC122 (ENSGALG00010003461)	TSC22D1 (ENSGALG00010003466)
Turkey	MODERN SPECIES		ENSMGAG00000018208	ENSMGAG00000017353	ENSMGAG00000014982	ENSMGAG00000014981	ENSMGAG00000020535	ENSMGAG00000014980	ENSMGAG00000014978 #37	ENSMGAG00000019324	ENSMGAG00000014976 #34	ENSMGAG00000014975 #33	ENSMGAG00000022612 #33	ENSMGAG00000014974 #32	ENSMGAG00000022914 #31	ENSMGAG00000014972 #29	ENSMGAG00000014971 #26	ENSMGAG00000014970 #22	ENSMGAG00000018775	ENSMGAG00000014969 #21	SUGT1 (ENSMGAG00000014968)	ENSMGAG00000014967	ENSMGAG00000014966	ENSMGAG00000014965	RNF169 (ENSMGAG00000019895)	ENSMGAG00000015296	SPCS2 (ENSMGAG00000022693)	ENSMGAG00000014699	ENSMGAG00000015120	ENSMGAG00000015119	ENSMGAG00000020745	ENSMGAG00000015117	ENSMGAG00000015115
Japanese quail	MODERN SPECIES		ENSCJPG00005019599	ENSCJPG00005019604	ENSCJPG00005019605	ENSCJPG00005019607	PCDH20 (ENSCJPG00005019611)	TDRD3 (ENSCJPG00005019613)	DIAPH3 (ENSCJPG00005019618)	PCDH17 (ENSCJPG00005019664)	ENSCJPG00005019668	ENSCJPG00005019669	OLFM4 (ENSCJPG00005019679)	PCDH8 (ENSCJPG00005019680)	CNMD (ENSCJPG00005019681)	SUGT1 (ENSCJPG00005019682)	ELF1 (ENSCJPG00005019683) #21	WBP4 (ENSCJPG00005019684) #22	MTRF1 (ENSCJPG00005019685) #26	NAA16 (ENSCJPG00005019686) #29	RGCC (ENSCJPG00005019688) #31	VWA8 (ENSCJPG00005019697) #32	DGKH (ENSCJPG00005019705) #33	AKAP11 (ENSCJPG00005019706) #34	TNFSF11 (ENSCJPG00005019710) #35	ENSCJPG00005019712	EPSTI1 (ENSCJPG00005019713) #37	DNAJC15 (ENSCJPG00005019714)	ENOX1 (ENSCJPG00005019716)	LACC1 (ENSCJPG00005019718)	CCDC122 (ENSCJPG00005019719)	ENSCJPG00005019723	ENSCJPG00005019724
African ostrich	MODERN SPECIES	525					PCDH20 (ENSSCUG00000003970)	TDRD3 (ENSSCUG00000003964)	ENSSCUG00000003961	DIAPH3 (ENSSCUG00000003937)	ENSSCUG00000003919	PCDH17 (ENSSCUG00000003918)	OLFM4 (ENSSCUG00000003907)	CNMD (ENSSCUG00000003896)	SUGT1 (ENSSCUG00000003883)	ENSSCUG00000003879	ELF1 (ENSSCUG00000003875) #21	WBP4 (ENSSCUG00000003872) #22	MTRF1 (ENSSCUG00000003869) #26	ENSSCUG00000003866	NAA16 (ENSSCUG00000003858) #29	RGCC (ENSSCUG00000003829) #31	VWA8 (ENSSCUG00000003815) #32	DGKH (ENSSCUG00000003794) #33	AKAP11 (ENSSCUG00000003790) #34	TNFSF11 (ENSSCUG00000003789) #35	EPSTI1 (ENSSCUG00000003786) #37	DNAJC15 (ENSSCUG00000003785)	ENOX1 (ENSSCUG00000003783)
Australian saltwater crocodile	MODERN SPECIES	27	ENSCPRG00005018726	ENSCPRG00005018731	PCDH20 (ENSCPRG00005018735)	TDRD3 (ENSCPRG00005018753)	DIAPH3 (ENSCPRG00005018773)	PCDH17 (ENSCPRG00005018798)	ENSCPRG00005018800	ENSCPRG00005018803	ENSCPRG00005018806	ENSCPRG00005018810	OLFM4 (ENSCPRG00005018811)	PCDH8 (ENSCPRG00005018816)	CNMD (ENSCPRG00005018818)	SUGT1 (ENSCPRG00005018821)	ELF1 (ENSCPRG00005018823) #21	WBP4 (ENSCPRG00005018826) #22	MTRF1 (ENSCPRG00005018828) #26	NAA16 (ENSCPRG00005000330) #29	RGCC (ENSCPRG00005000828) #31	VWA8 (ENSCPRG00005000978) #32	DGKH (ENSCPRG00005001063) #33	AKAP11 (ENSCPRG00005001078) #34	TNFSF11 (ENSCPRG00005001171) #35	EPSTI1 (ENSCPRG00005001259) #37	DNAJC15 (ENSCPRG00005001271)	ENOX1 (ENSCPRG00005001394)	CCDC122 (ENSCPRG00005001471)	LACC1 (ENSCPRG00005001487)	SERP2 (ENSCPRG00005001533)	ENSCPRG00005001536	ENSCPRG00005001575
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00660000095999	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.h	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.s.a	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.h	ENSGT00950000185064	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.s.a	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647
Abingdon island giant tortoise	MODERN SPECIES	513															ELF1 (ENSCABG00000000775) #21	WBP4 (ENSCABG00000000778) #22	ENSCABG00000000783 #26	NAA16 (ENSCABG00000000785) #29	RGCC (ENSCABG00000000793) #31	ENSCABG00000000821 #32
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005000010	ENSGEVG00005008257	ENSGEVG00005008233	ENSGEVG00005008229	PCDH17 (ENSGEVG00005008197)	ENSGEVG00005008177	ENSGEVG00005008154	ENSGEVG00005008129	ENSGEVG00005008103	ENSGEVG00005008068	ENSGEVG00005008030	CNMD (ENSGEVG00005007940)	SUGT1 (ENSGEVG00005007891)	ELF1 (ENSGEVG00005007874) #21	ENSGEVG00005007850	WBP4 (ENSGEVG00005007828) #22	MTRF1 (ENSGEVG00005007806) #26	NAA16 (ENSGEVG00005007739) #29	RGCC (ENSGEVG00005007709) #31	VWA8 (ENSGEVG00005007641) #32	DGKH (ENSGEVG00005007555) #33	AKAP11 (ENSGEVG00005007525) #34	TNFSF11 (ENSGEVG00005007495) #35	ENSGEVG00005007464 #36	EPSTI1 (ENSGEVG00005007445) #37	DNAJC15 (ENSGEVG00005007427)	ENOX1 (ENSGEVG00005007371)	CCDC122 (ENSGEVG00005007344)	LACC1 (ENSGEVG00005007327)	SERP2 (ENSGEVG00005007300)	ENSGEVG00005007278
Emydidae	ANCESTRAL SPECIES	63				ENSGT00940000155079.b	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.h	ENSGT01030000235378	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.s.a	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	1	ENSTMTG00000007586	ENSTMTG00000007577	ENSTMTG00000007556	ENSTMTG00000007537	ENSTMTG00000007512	ENSTMTG00000007033	ENSTMTG00000006982	ENSTMTG00000006955	ENSTMTG00000006944	ENSTMTG00000006902	ENSTMTG00000006840	ENSTMTG00000006789	ENSTMTG00000006734	ENSTMTG00000006712	ENSTMTG00000006691 #21	ENSTMTG00000006679 #22	ENSTMTG00000006660 #26	ENSTMTG00000005913 #29	ENSTMTG00000005824 #31	ENSTMTG00000002353 #32	ENSTMTG00000002046 #33	ENSTMTG00000001710 #34	ENSTMTG00000001612	ENSTMTG00000001603 #35	ENSTMTG00000001591 #37	ENSTMTG00000001585	ENSTMTG00000001580	ENSTMTG00000001563	ENSTMTG00000001552	ENSTMTG00000001537	ENSTMTG00000001527
Three-toed box turtle	MODERN SPECIES	2	ENSTMTG00000015383	ENSTMTG00000015374	ENSTMTG00000015365	ENSTMTG00000015341	ENSTMTG00000015130	ENSTMTG00000015099	ENSTMTG00000015093	ENSTMTG00000015080	ENSTMTG00000015074	ENSTMTG00000015049	ENSTMTG00000015042	ENSTMTG00000015019	ENSTMTG00000014966	ENSTMTG00000014918	ENSTMTG00000014905 #21	ENSTMTG00000014897 #22	ENSTMTG00000014883 #26	ENSTMTG00000014849 #29	ENSTMTG00000014836 #31	ENSTMTG00000012069 #32	ENSTMTG00000011679 #33	ENSTMTG00000011355 #34	ENSTMTG00000011311 #35	ENSTMTG00000013365	ENSTMTG00000013347 #37	ENSTMTG00000013337	ENSTMTG00000013330	ENSTMTG00000013296	ENSTMTG00000013271	ENSTMTG00000013255	ENSTMTG00000013242
painted turtle	MODERN SPECIES		TASL (ENSCPBG00000007359)	ENSCPBG00000007384	ENSCPBG00000007415	TAB3 (ENSCPBG00000007424)	ENSCPBG00000007464	ENSCPBG00000007838	PLCL1 (ENSCPBG00000007848)	ENSCPBG00000007878	ENSCPBG00000007882	PCDH17 (ENSCPBG00000007892)	ENSCPBG00000007894	ENSCPBG00000007903	CNMD (ENSCPBG00000007913)	SUGT1 (ENSCPBG00000007923)	ELF1 (ENSCPBG00000007936) #21	WBP4 (ENSCPBG00000007957) #22	ENSCPBG00000007965	MTRF1 (ENSCPBG00000007969) #26	NAA16 (ENSCPBG00000007986) #29	RGCC (ENSCPBG00000008004) #31	VWA8 (ENSCPBG00000008021) #32	LACC1 (ENSCPBG00000008044)	SERP2 (ENSCPBG00000008055)	ENSCPBG00000008064	NUFIP1 (ENSCPBG00000008069)	GPALPP1 (ENSCPBG00000008078)	GTF2F2 (ENSCPBG00000008086)	KCTD4 (ENSCPBG00000008094)	ENSCPBG00000008104	SLC25A30 (ENSCPBG00000008116)	COG3 (ENSCPBG00000008129)
Chinese turtle	MODERN SPECIES	1169											OLFM4 (ENSPSIG00000005097)	PCDH8 (ENSPSIG00000005419)	CNMD (ENSPSIG00000005454)	SUGT1 (ENSPSIG00000005655)	ELF1 (ENSPSIG00000006204) #21	WBP4 (ENSPSIG00000006270) #22	MTRF1 (ENSPSIG00000004773) #26	NAA16 (ENSPSIG00000005139) #29	VWA8 (ENSPSIG00000005988) #32	ENSPSIG00000006588 #33	ENSPSIG00000006696 #33	AKAP11 (ENSPSIG00000006777) #34	TNFSF11 (ENSPSIG00000007115) #35	ENSPSIG00000007124	ENSPSIG00000001077	DNAJC15 (ENSPSIG00000007131)	ENOX1 (ENSPSIG00000007152)	CCDC122 (ENSPSIG00000007381)	LACC1 (ENSPSIG00000007488)	ENSPSIG00000007493	ENSPSIG00000001094
Lepidosauria	ANCESTRAL SPECIES	40	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.r	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647
Laterata	ANCESTRAL SPECIES		ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT01030000235363	ENSGT00940000155079.a.a.c	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00900000143708	ENSGT00940000156894	ENSGT00940000155454.r.a	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00960000192339	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000166021	ENSGT00390000003758
Common wall lizard	MODERN SPECIES	15						ENSPMRG00000020689	OLFM4 (ENSPMRG00000020684)	ENSPMRG00000020679	PCDH8 (ENSPMRG00000020674)	CNMD (ENSPMRG00000020664)	ENSPMRG00000020656	SUGT1 (ENSPMRG00000020649)	ELF1 (ENSPMRG00000020642) #21	ENSPMRG00000020637	ENSPMRG00000020632	ENSPMRG00000020623 #22	ENSPMRG00000020612	ENSPMRG00000020606	MTRF1 (ENSPMRG00000020599) #26	ENSPMRG00000020596	TENT4A (ENSPMRG00000020583)	ENSPMRG00000020576	ENSPMRG00000020571	ENSPMRG00000020569	ENSPMRG00000020564	ENSPMRG00000020558	ENSPMRG00000020555	ADCY2 (ENSPMRG00000020260)	ENSPMRG00000020190	CFAP90 (ENSPMRG00000020186)	FASTKD3 (ENSPMRG00000020182)
Argentine black and white tegu	MODERN SPECIES	44	ENSSMRG00000000563	TDRD3 (ENSSMRG00000000527)	DIAPH3 (ENSSMRG00000000481)	ENSSMRG00000000462	ENSSMRG00000000450	ENSSMRG00000000424	ENSSMRG00000000417	PCDH17 (ENSSMRG00000000386)	ENSSMRG00000000303	ENSSMRG00000000205	OLFM4 (ENSSMRG00000000176)	ENSSMRG00000000030	CNMD (ENSSMRG00000022991)	SUGT1 (ENSSMRG00000022990)	ELF1 (ENSSMRG00000022989) #21	WBP4 (ENSSMRG00000022988) #22	MTRF1 (ENSSMRG00000022986) #26	NAA16 (ENSSMRG00000022985) #29	RGCC (ENSSMRG00000022984) #31	VWA8 (ENSSMRG00000022816) #32	ENSSMRG00000022814	DGKH (ENSSMRG00000022813) #33	AKAP11 (ENSSMRG00000022812) #34	TNFSF11 (ENSSMRG00000022811) #35	ENSSMRG00000022810	EPSTI1 (ENSSMRG00000022808) #37	DNAJC15 (ENSSMRG00000022807)	ENSSMRG00000022806	ENOX1 (ENSSMRG00000022804)	CCDC122 (ENSSMRG00000022803)	LACC1 (ENSSMRG00000022802)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155219	ENSGT00940000155454.r	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000154512 #36	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647
Elapidae	ANCESTRAL SPECIES	13	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.a.b	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.i.a	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.r	ENSGT00940000155219	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00550000075117	ENSGT00990000203769	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021
Elapidae_a	ANCESTRAL SPECIES	70	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.a.b	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.i.a	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.r	ENSGT00940000155219	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00550000075117	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758
Blue-lipped sea krait	MODERN SPECIES	5375																ENSLLTG00000017192 #22	SLC25A38 (ENSLLTG00000017190)
Acanthophiinae	ANCESTRAL SPECIES	66	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.a.b	ENSGT00940000154818.b.a	ENSGT00940000155079.a.a	ENSGT00940000156743	ENSGT00940000155487	ENSGT00940000157767.i.a	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454.r	ENSGT00940000155219	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00550000075117	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000163647	ENSGT00940000166021	ENSGT00940000163575
Eastern brown snake	MODERN SPECIES	27	ENSPTXG00000004011	ENSPTXG00000004012	ENSPTXG00000004013	ENSPTXG00000004015	PCDH20 (ENSPTXG00000004017)	TDRD3 (ENSPTXG00000004018)	DIAPH3 (ENSPTXG00000004024)	PCDH17 (ENSPTXG00000005859)	ENSPTXG00000005860	ENSPTXG00000005862	OLFM4 (ENSPTXG00000005863)	ENSPTXG00000005864	ENSPTXG00000005865	SUGT1 (ENSPTXG00000005866)	ELF1 (ENSPTXG00000005867) #21	WBP4 (ENSPTXG00000005868) #22	SLC25A38 (ENSPTXG00000005869)	MTRF1 (ENSPTXG00000005870) #26	NAA16 (ENSPTXG00000005871) #29	VWA8 (ENSPTXG00000005872) #32	DGKH (ENSPTXG00000005947) #33	AKAP11 (ENSPTXG00000005952) #34	TNFSF11 (ENSPTXG00000005954) #35	DNAJC15 (ENSPTXG00000005956)	ENOX1 (ENSPTXG00000005958)	CCDC122 (ENSPTXG00000005959)	LACC1 (ENSPTXG00000005964)	ENSPTXG00000003593	ENSPTXG00000003595	GPALPP1 (ENSPTXG00000003598)	GTF2F2 (ENSPTXG00000003602)
Mainland tiger snake	MODERN SPECIES	115									ENSNSUG00000008236	PCDH17 (ENSNSUG00000008237)	ENSNSUG00000008238	OLFM4 (ENSNSUG00000008239)	ENSNSUG00000008247	SUGT1 (ENSNSUG00000008248)	ELF1 (ENSNSUG00000008250) #21	WBP4 (ENSNSUG00000008251) #22	SLC25A38 (ENSNSUG00000008253)	MTRF1 (ENSNSUG00000008254) #26	NAA16 (ENSNSUG00000008255) #29	RGCC (ENSNSUG00000009279) #31
Indian cobra	MODERN SPECIES	5	ENSNNAG00000015535	ENSNNAG00000015541	PCDH20 (ENSNNAG00000015549)	TDRD3 (ENSNNAG00000015559)	ENSNNAG00000015586	ENSNNAG00000015642	ENSNNAG00000015662	PCDH17 (ENSNNAG00000015671)	ENSNNAG00000015685	ENSNNAG00000015693	ENSNNAG00000015706	OLFM4 (ENSNNAG00000015722)	ENSNNAG00000015760	SUGT1 (ENSNNAG00000015788)	ELF1 (ENSNNAG00000015818) #21	WBP4 (ENSNNAG00000015833) #22	SLC25A38 (ENSNNAG00000015851)	ENSNNAG00000015862	MTRF1 (ENSNNAG00000015872) #26	NAA16 (ENSNNAG00000015941) #29	RGCC (ENSNNAG00000016393) #31	DGKH (ENSNNAG00000016413) #33	ENSNNAG00000016639 #34	DNAJC15 (ENSNNAG00000016663)	ENOX1 (ENSNNAG00000016671)	ENSNNAG00000016694	LACC1 (ENSNNAG00000016702)	ENSNNAG00000016709	GPALPP1 (ENSNNAG00000007615)	GTF2F2 (ENSNNAG00000007652)	KCTD4 (ENSNNAG00000007740)
Lizard	MODERN SPECIES	2	ENSACAG00000037204	ENSACAG00000036672	ENSACAG00000045251	ENSACAG00000036857	ENSACAG00000037367	ENSACAG00000043009	ENSACAG00000040354	ENSACAG00000044405	ENSACAG00000023618	OLFM4 (ENSACAG00000000380)	ENSACAG00000044102	ENSACAG00000041678	ENSACAG00000000442	SUGT1 (ENSACAG00000000605)	ELF1 (ENSACAG00000000719) #21	WBP4 (ENSACAG00000000798) #22	ENSACAG00000042946	MTRF1 (ENSACAG00000000897) #26	NAA16 (ENSACAG00000000984) #29	RGCC (ENSACAG00000001170) #31	VWA8 (ENSACAG00000001188) #32	DGKH (ENSACAG00000001662) #33	AKAP11 (ENSACAG00000001911) #34	TNFSF11 (ENSACAG00000037842) #35	ENSACAG00000034864 #36	EPSTI1 (ENSACAG00000001987) #37	DNAJC15 (ENSACAG00000043736)	ENOX1 (ENSACAG00000002030)	ENSACAG00000037987	RGS10 (ENSACAG00000034821)	TIAL1 (ENSACAG00000016986)
tuatara	MODERN SPECIES	1041										OLFM4 (ENSSPUG00000007230)	PCDH8 (ENSSPUG00000007247)	CNMD (ENSSPUG00000007258)	ENSSPUG00000007274	ENSSPUG00000007285	ELF1 (ENSSPUG00000007306) #21	WBP4 (ENSSPUG00000007329) #22	ENSSPUG00000007342	MTRF1 (ENSSPUG00000007354) #26	NAA16 (ENSSPUG00000007362) #29	RGCC (ENSSPUG00000007376) #31	ENSSPUG00000007386 #32	ENSSPUG00000007396 #32	ENSSPUG00000007410 #32	ENSSPUG00000007473 #33	ENSSPUG00000007484 #33	AKAP11 (ENSSPUG00000007562) #34	TNFSF11 (ENSSPUG00000007843) #35	EPSTI1 (ENSSPUG00000007856) #37	DNAJC15 (ENSSPUG00000007867)
Anura	ANCESTRAL SPECIES	3	ENSGT00390000015293	ENSGT00530000063106.C.f	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.a	ENSGT00390000000464	ENSGT00940000156743	ENSGT01040000240375.D	ENSGT00940000155487	ENSGT00940000157767	ENSGT00940000156894	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b
Frog	MODERN SPECIES	2	mettl18 (ENSXETG00000012806)	pcdh20 (ENSXETG00000012808)	tdrd3 (ENSXETG00000012815)	ENSXETG00000042070	diaph3 (ENSXETG00000018144)	ENSXETG00000037497	pcdh17 (ENSXETG00000013565)	ENSXETG00000043598	ENSXETG00000041956	ENSXETG00000043369	ENSXETG00000008792	pcdh8 (ENSXETG00000018865)	cnmd (ENSXETG00000018878)	sugt1 (ENSXETG00000018887)	elf1 (ENSXETG00000018893) #21	wbp4 (ENSXETG00000018896) #22	ENSXETG00000040356	kbtbd7 (ENSXETG00000046134)	naa16 (ENSXETG00000018897) #29	rgcc (ENSXETG00000018908) #31	vwa8 (ENSXETG00000018910) #32	dgkh (ENSXETG00000014560) #33	akap11 (ENSXETG00000014581) #34	ENSXETG00000042379	tnfsf11 (ENSXETG00000025365) #35	epsti1 (ENSXETG00000035529) #37	dnajc15 (ENSXETG00000014585)	enox1 (ENSXETG00000014586)	ENSXETG00000042617	nelfb (ENSXETG00000014774)	lacc1 (ENSXETG00000014775)
Leishan spiny toad	MODERN SPECIES	5	PCDH17 (ENSLLEG00000014033)	ENSLLEG00000014139	ENSLLEG00000014213	ENSLLEG00000014241	ENSLLEG00000014278	ENSLLEG00000014301	OLFM4 (ENSLLEG00000014331)	ENSLLEG00000014467	ENSLLEG00000014493	PCDH8 (ENSLLEG00000014518)	ENSLLEG00000014562	CNMD (ENSLLEG00000014604)	SUGT1 (ENSLLEG00000014723)	ENSLLEG00000015055	ELF1 (ENSLLEG00000015090) #21	WBP4 (ENSLLEG00000015277) #22	ENSLLEG00000015378	ENSLLEG00000015391	ENSLLEG00000015419	MTRF1 (ENSLLEG00000015442) #26	NAA16 (ENSLLEG00000015535) #29	RGCC (ENSLLEG00000015785) #31	VWA8 (ENSLLEG00000015910) #32	DGKH (ENSLLEG00000017489) #33	ENSLLEG00000018968	AKAP11 (ENSLLEG00000019042) #34	ENSLLEG00000019224	ENSLLEG00000019241	TNFSF11 (ENSLLEG00000019255) #35	EPSTI1 (ENSLLEG00000019302) #37	ENSLLEG00000019591
Coelacanth	MODERN SPECIES	1146												PCDH8 (ENSLACG00000003656)	CNMD (ENSLACG00000004090)	SUGT1 (ENSLACG00000004667)	ELF1 (ENSLACG00000006056) #21	WBP4 (ENSLACG00000008754) #22	ENSLACG00000010399	MTRF1 (ENSLACG00000010582) #26	NAA16 (ENSLACG00000010903) #29	zgc:101559 (ENSLACG00000011557)	RGCC (ENSLACG00000012043) #31
Actinopterygii	ANCESTRAL SPECIES	3	ENSGT00390000001134.a.a	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00940000156743	ENSGT01040000240375.D	ENSGT00940000155487	ENSGT00940000181563	ENSGT00940000157767	ENSGT00940000156894	ENSGT00900000143708	ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b #21	ENSGT00390000013956 #22	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00940000166281	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693
Neopterygii	ANCESTRAL SPECIES	13	ENSGT00940000156711	ENSGT00940000158108	ENSGT00940000158486	ENSGT00960000186835	ENSGT00390000018369	ENSGT00940000154925	ENSGT00950000183159.b.c.b	ENSGT00940000161074.a	ENSGT00390000015700.a	ENSGT00390000003706.a.b.b	ENSGT00390000010065	ENSGT00940000159395	ENSGT00940000155756	ENSGT00530000063872.B	ENSGT00390000017860.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00950000183174.B.b #29	ENSGT00940000166281	ENSGT00390000011709 #31	ENSGT00390000006601 #32	ENSGT00940000158106 #33	ENSGT00940000153313.B #34	ENSGT01070000253816.a.a.b #35	ENSGT00390000013820 #37	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647
Osteoglossocephalai	ANCESTRAL SPECIES	738																ENSGT00390000013956 #22	ENSGT00940000156877 #26
Clupeocephala	ANCESTRAL SPECIES	388												ENSGT00940000156862	ENSGT00940000153981.A	ENSGT00940000159196	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758	ENSGT00970000196952	ENSGT00390000005130
Euteleosteomorpha	ANCESTRAL SPECIES	129	ENSGT00940000157849.n.c	ENSGT00940000162479.a	ENSGT00940000155360.B.k	ENSGT00940000163243	ENSGT00390000008846	ENSGT00940000159205	ENSGT00940000163031.b.a.a	ENSGT00390000018553	ENSGT00940000164275.f	ENSGT00940000157360.c	ENSGT00940000156807.f	ENSGT00390000017581.b.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b
Acanthomorphata	ANCESTRAL SPECIES	85						ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000171777	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f	ENSGT00940000163944
Euacanthomorphacea	ANCESTRAL SPECIES	36					ENSGT01090000260459	ENSGT00940000154840.b.f	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000171777	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00970000198005	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f
Percomorphaceae	ANCESTRAL SPECIES	22	ENSGT00390000005935	ENSGT00940000177589	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000171777	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00970000198005	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.b	ENSGT01090000260459	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00940000156702.a.b.b	ENSGT01100000263585.e.b	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.e.a	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.f	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a
Anabantaria	ANCESTRAL SPECIES	14	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585.e.a	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.f	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00390000005130	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a
Anabantoidei	ANCESTRAL SPECIES	23	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585.e.a	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.f	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00390000005130	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b.d	ENSGT01050000244823.d.b.a.b.c	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a
Climbing perch	MODERN SPECIES	11	ENSATEG00000016858	ENSATEG00000029999	ENSATEG00000025533	ENSATEG00000017105	ENSATEG00000017044	ENSATEG00000017119	ENSATEG00000017165	ENSATEG00000028636	ENSATEG00000017222	ENSATEG00000017244	ENSATEG00000029263	ENSATEG00000017259	jagn1b (ENSATEG00000025315)	ENSATEG00000017276	ENSATEG00000017314	ENSATEG00000026081 #22	ENSATEG00000028401 #26	ENSATEG00000027904	ENSATEG00000017447	ENSATEG00000017469	ENSATEG00000017488	ENSATEG00000017546	ENSATEG00000017576	ENSATEG00000017586	ENSATEG00000017631	ENSATEG00000017677	ENSATEG00000029365	ENSATEG00000017819	ENSATEG00000017804	ENSATEG00000017836	ENSATEG00000017845 ##10
Siamese fighting fish	MODERN SPECIES	10	CTDSP1 (ENSBSLG00000000123)	obsl1a (ENSBSLG00000000192)	ENSBSLG00000000359	ENSBSLG00000000711	ENSBSLG00000000717	ATP1A1 (ENSBSLG00000000739)	ENSBSLG00000000800	ccdc28a (ENSBSLG00000000804)	ENSBSLG00000000806	ENSBSLG00000000818	FILIP1L (ENSBSLG00000000822)	ENSBSLG00000000829	jagn1b (ENSBSLG00000000831)	ENSBSLG00000000839	ENSBSLG00000000871	ENSBSLG00000000907 #22	ENSBSLG00000000912 #26	ENSBSLG00000000916	ENSBSLG00000001189	ENSBSLG00000001209	chn1 (ENSBSLG00000001277)	FARP1 (ENSBSLG00000001406)	ggact.3 (ENSBSLG00000001512)	arl13b (ENSBSLG00000001516)	ENSBSLG00000001576	gart (ENSBSLG00000002276)	n6amt1 (ENSBSLG00000002587)	ENSBSLG00000002591	ENSBSLG00000002596	ENSBSLG00000002600	ENSBSLG00000002606
Zig-zag eel	MODERN SPECIES	11	ENSMAMG00000022170	mrpl39 (ENSMAMG00000022169)	jam2a (ENSMAMG00000022163)	atp5pf (ENSMAMG00000022160)	APP (ENSMAMG00000022137)	cyyr1 (ENSMAMG00000022132)	ENSMAMG00000022130	ENSMAMG00000022119	ENSMAMG00000022115	ENSMAMG00000028432	ENSMAMG00000022092	ENSMAMG00000022082	ENSMAMG00000022070	ENSMAMG00000022065	ENSMAMG00000022055	ENSMAMG00000022052 #22	ENSMAMG00000022048 #26	ENSMAMG00000024548	ENSMAMG00000022041	ENSMAMG00000022033	ENSMAMG00000022027	ENSMAMG00000026438	ENSMAMG00000022028	ENSMAMG00000026122	ENSMAMG00000022029	ENSMAMG00000022022 ##10	ENSMAMG00000022018	ENSMAMG00000022014	ENSMAMG00000022007	ENSMAMG00000022001	ENSMAMG00000021999
Carangaria	ANCESTRAL SPECIES	23	ENSGT00940000156702.a.b.b	ENSGT01100000263585.e.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.f	ENSGT01100000263585.e.a	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a
Pleuronectoidei	ANCESTRAL SPECIES	62				ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.f	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00390000005130	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a	ENSGT00940000171594
Turbot	MODERN SPECIES		ENSSMAG00000000951	nhej1 (ENSSMAG00000000932)	ENSSMAG00000000890	ENSSMAG00000000792	ENSSMAG00000016653	ENSSMAG00000000767	ENSSMAG00000015891	ENSSMAG00000015876	ENSSMAG00000015855	ENSSMAG00000015838	ENSSMAG00000015826	ENSSMAG00000015817	jagn1b (ENSSMAG00000015803)	ENSSMAG00000036569	ENSSMAG00000015752	ENSSMAG00000015714 #22	ENSSMAG00000015740 #26	ENSSMAG00000028514	ENSSMAG00000015699	ENSSMAG00000015691	ENSSMAG00000015648	ENSSMAG00000015522	ENSSMAG00000015508	ENSSMAG00000015450	ENSSMAG00000015271	ENSSMAG00000015184	ENSSMAG00000015250	ENSSMAG00000015160	ENSSMAG00000015150	ENSSMAG00000015146	ENSSMAG00000013794
Tongue sole	MODERN SPECIES	5	ENSCSEG00000005789	ENSCSEG00000005785	ENSCSEG00000005771	igfbp5a (ENSCSEG00000005767)	igfbp2a (ENSCSEG00000005765)	ENSCSEG00000005756	stk11ip (ENSCSEG00000005747)	ENSCSEG00000005740	inha (ENSCSEG00000005738)	ENSCSEG00000005732	ENSCSEG00000005724	CTDSP1 (ENSCSEG00000005719)	ENSCSEG00000005712	dynlt3 (ENSCSEG00000005704)	ENSCSEG00000005680	ENSCSEG00000005673 #22	ENSCSEG00000005667 #26	ENSCSEG00000005664	ENSCSEG00000005660	sumo1 (ENSCSEG00000005654)	MAP3K2 (ENSCSEG00000005627)	ggact.3 (ENSCSEG00000005617)	FARP1 (ENSCSEG00000005575)	chn1 (ENSCSEG00000005559)	ENSCSEG00000005550	ENSCSEG00000005526	stat1a (ENSCSEG00000005471)	mstna (ENSCSEG00000005465)	ENSCSEG00000005461	glsa (ENSCSEG00000005440)	nab1a (ENSCSEG00000005426)
Carangaria_A	ANCESTRAL SPECIES	23	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585.e.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585.e.a	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT00940000159144.B	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g
Barramundi perch	MODERN SPECIES	289													jagn1b (ENSLCAG00010012281)	ENSLCAG00010012261	ENSLCAG00010012040	ENSLCAG00010011927 #22	ENSLCAG00010011917 #26	ENSLCAG00010011909	zgc:65895 (ENSLCAG00010011901)	ENSLCAG00010011898	chn1 (ENSLCAG00010011876)	FARP1 (ENSLCAG00010011721)	arl13b (ENSLCAG00010011641)	ggact.3 (ENSLCAG00010011636)	NCAM2 (ENSLCAG00010011573)	gart (ENSLCAG00010011527)
Seriola	ANCESTRAL SPECIES	44	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.e.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a
Yellowtail amberjack	MODERN SPECIES	3221													jagn1b (ENSSLDG00000013700)	ENSSLDG00000013676	ENSSLDG00000013621	ENSSLDG00000013599 #22	ENSSLDG00000013584 #26	zgc:65895 (ENSSLDG00000013567)	chn1 (ENSSLDG00000013541)	ENSSLDG00000013526	FARP1 (ENSSLDG00000013411)	ggact.3 (ENSSLDG00000013514)	arl13b (ENSSLDG00000013361)	NCAM2 (ENSSLDG00000013314)	gart (ENSSLDG00000013225)	n6amt1 (ENSSLDG00000013280)	atp5pf (ENSSLDG00000013207)	jam2a (ENSSLDG00000013189)	mrpl39 (ENSSLDG00000013175)	rap2ab (ENSSLDG00000013167)	mbnl2 (ENSSLDG00000013155)
Greater amberjack	MODERN SPECIES	8	ENSSDUG00000022396	spega (ENSSDUG00000022403)	CTDSP1 (ENSSDUG00000022464)	obsl1a (ENSSDUG00000022471)	ATP1A1 (ENSSDUG00000022483)	ENSSDUG00000022513	ENSSDUG00000022521	ENSSDUG00000022523	ccdc28a (ENSSDUG00000022533)	ENSSDUG00000022543	FILIP1L (ENSSDUG00000022571)	ENSSDUG00000022575	COL8A1 (ENSSDUG00000022581)	jagn1b (ENSSDUG00000022584)	ENSSDUG00000022588	ENSSDUG00000022603 #22	ENSSDUG00000022608 #26	ENSSDUG00000022614	zgc:65895 (ENSSDUG00000022619)
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a
Eupecaria_A	ANCESTRAL SPECIES	23	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.t
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	984																ENSLBEG00000023027 #22	MTRF1 (ENSLBEG00000023151) #26	ENSLBEG00000023187	ENSLBEG00000023208	ENSLBEG00000023235
Ballan wrasse	MODERN SPECIES	785									DNAI1 (ENSLBEG00000027021)	n6amt1 (ENSLBEG00000027051)	ENSLBEG00000027064	ENSLBEG00000027092	ENSLBEG00000027137	ENSLBEG00000027148	MTRF1 (ENSLBEG00000027169) #26	ENSLBEG00000027158 #22
Eupecaria_B	ANCESTRAL SPECIES	23	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000159144.A.f	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.t
Perciformes	ANCESTRAL SPECIES	24	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a
Cottioidei	ANCESTRAL SPECIES	24	ENSGT00390000005935	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000171777	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT00940000154344.b	ENSGT00940000161628	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000162022	ENSGT00940000161153	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT01030000234555.a.b.f.b	ENSGT00940000154342.C
Lumpfish	MODERN SPECIES	11	zswim2 (ENSCLMG00005003873)	FAM171B (ENSCLMG00005003871)	ENSCLMG00005003860	ENSCLMG00005003870	OSBPL11 (ENSCLMG00005003844)	gpd1c (ENSCLMG00005003822)	NCKAP5 (ENSCLMG00005003817)	ENSCLMG00005003813	actr3 (ENSCLMG00005003694)	ENSCLMG00005003691	pou3f3b (ENSCLMG00005003690)	mrps9 (ENSCLMG00005003170)	ENSCLMG00005003157	n6amt1 (ENSCLMG00005003150)	gart (ENSCLMG00005003036)	ENSCLMG00005002951 #22	ENSCLMG00005002934 #26	ENSCLMG00005002920	ENSCLMG00005002907	ENSCLMG00005002895	ENSCLMG00005002877	ENSCLMG00005002826	ENSCLMG00005011335	ENSCLMG00005011334	ENSCLMG00005011332	ENSCLMG00005011326	ENSCLMG00005011322	ENSCLMG00005011318	ENSCLMG00005011153	MXRA5 (ENSCLMG00005011145)	PRKX (ENSCLMG00005011143)
Stickleback	MODERN SPECIES		dhrs13b.1 (ENSGACG00000013619)	akap1b (ENSGACG00000013633)	cuedc1b (ENSGACG00000013641)	wsb1 (ENSGACG00000013651)	KSR1 (ENSGACG00000013663)	lgals9l5 (ENSGACG00000013667)	MYO18A (ENSGACG00000013682)	pipox (ENSGACG00000013689)	ENSGACG00000013700	ENSGACG00000013701	PHF12 (ENSGACG00000013703)	pou3f3b (ENSGACG00000013707)	ENSGACG00000013709	ENSGACG00000013710	ENSGACG00000013712	ENSGACG00000013725 #22	MTRF1 (ENSGACG00000013728) #26	ENSGACG00000013730	ENSGACG00000013733	ENSGACG00000013738	ENSGACG00000013742	nop58 (ENSGACG00000013746)	wdr12 (ENSGACG00000013778)	ICA1L (ENSGACG00000013811)	FAM117B (ENSGACG00000013815)	bmpr2a (ENSGACG00000013817)	ENSGACG00000013821	slc15a1b (ENSGACG00000013831)	stk24b (ENSGACG00000013848)	ENSGACG00000013867	gcga (ENSGACG00000013877)
Perciformes_a	ANCESTRAL SPECIES	25	ENSGT00390000005935	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a
Channel bull blenny	MODERN SPECIES	11	inha (ENSCGOG00000015271)	CTDSP1 (ENSCGOG00000015229)	obsl1a (ENSCGOG00000015161)	ENSCGOG00000015155	atp1a1a.2 (ENSCGOG00000001511)	ENSCGOG00000001097	ENSCGOG00000001092	ENSCGOG00000001090	ccdc28a (ENSCGOG00000001087)	ENSCGOG00000001082	FILIP1L (ENSCGOG00000001081)	COL8A1 (ENSCGOG00000001079)	jagn1b (ENSCGOG00000001078)	ENSCGOG00000001076	ENSCGOG00000000696	ENSCGOG00000000483 #22	ENSCGOG00000000438 #26	ENSCGOG00000000435	ENSCGOG00000000434	nudt15 (ENSCGOG00000000432)	cckbra (ENSCGOG00000000429)	cpo (ENSCGOG00000000424)	NALF1 (ENSCGOG00000000422)	lig4 (ENSCGOG00000000420)	irs2a (ENSCGOG00000000419)	acp2 (ENSCGOG00000000409)	gpr137c (ENSCGOG00000000398)	TXNDC16 (ENSCGOG00000000394)	ptger2a (ENSCGOG00000000388)	NID2 (ENSCGOG00000000308)	rtraf (ENSCGOG00000000276)
Pike perch	MODERN SPECIES	9	ENSSLUG00000026108	ENSSLUG00000026107	ENSSLUG00000026087	ENSSLUG00000026063	ATP1A1 (ENSSLUG00000026029)	ENSSLUG00000026021	ENSSLUG00000026020	ccdc28a (ENSSLUG00000026019)	ENSSLUG00000026018	FILIP1L (ENSSLUG00000026015)	ENSSLUG00000026014	COL8A1 (ENSSLUG00000026013)	jagn1b (ENSSLUG00000026012)	ENSSLUG00000026010	ENSSLUG00000025996	ENSSLUG00000025991 #22	ENSSLUG00000025990 #26	ENSSLUG00000025987	zgc:65895 (ENSSLUG00000025986)	ENSSLUG00000025981	tmem47 (ENSSLUG00000025979)	ENSSLUG00000025978	DMD (ENSSLUG00000025849)	ENSSLUG00000025724	gtf3c3 (ENSSLUG00000025706)	HECW2 (ENSSLUG00000025595)	ENSSLUG00000025565
Eupecaria_C	ANCESTRAL SPECIES	30	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.t
Gilthead seabream	MODERN SPECIES	16	ENSSAUG00010027013	ENSSAUG00010027015	ENSSAUG00010027016	ENSSAUG00010027019	ENSSAUG00010027023	ENSSAUG00010027030	ENSSAUG00010027034	ENSSAUG00010027038	ENSSAUG00010027039	ENSSAUG00010027041	ENSSAUG00010008949	ENSSAUG00010008950	ENSSAUG00010008953	ENSSAUG00010008958	ENSSAUG00010008970	ENSSAUG00010009365 #22	ENSSAUG00010009368 #26	zgc:65895 (ENSSAUG00010009367)	ENSSAUG00010009370	ENSSAUG00010009378	ENSSAUG00010009384	ENSSAUG00010009397	ENSSAUG00010009401	ENSSAUG00010009403	ENSSAUG00010009417	KIF5C (ENSSAUG00010012040)	MBD5 (ENSSAUG00010016533)	orc4 (ENSSAUG00010016547)	ACVR2A (ENSSAUG00010016790)	zeb2b (ENSSAUG00010017032)	ENSSAUG00010017040
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	41	ENSGT01090000260005.a.a.a.b.a.b.b	ENSGT00390000005935	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT01030000234614.A.l.b ##10	ENSGT00940000156167.a	ENSGT00950000183034.A.g	ENSGT00510000047027.c.a
European seabass	MODERN SPECIES	15	ENSDLAG00005001248	inha (ENSDLAG00005001265)	spega (ENSDLAG00005001309)	ENSDLAG00005031224	obsl1a (ENSDLAG00005001666)	ENSDLAG00005008575	ENSDLAG00005001937	ENSDLAG00005008580	ENSDLAG00005008623	ENSDLAG00005008587	ENSDLAG00005008692	ENSDLAG00005008697	ENSDLAG00005034157	jagn1b (ENSDLAG00005008710)	ENSDLAG00005008723	ENSDLAG00005008856 #22	ENSDLAG00005008866 #26	ENSDLAG00005033899	ENSDLAG00005034796	ENSDLAG00005008916	ENSDLAG00005009274	ENSDLAG00005031513	ENSDLAG00005009709	ENSDLAG00005010799	ENSDLAG00005033679	ENSDLAG00005033305	ENSDLAG00005011003	ENSDLAG00005011017 ##10	ENSDLAG00005033045	ENSDLAG00005011150	ENSDLAG00005011180
Large yellow croaker	MODERN SPECIES	486	FARP1 (ENSLCRG00005017744)	ggact.3 (ENSLCRG00005017504)	arl13b (ENSLCRG00005017496)	NCAM2 (ENSLCRG00005017384)	gart (ENSLCRG00005017321)	dnpep (ENSLCRG00005016773)	desmb (ENSLCRG00005016581)	tmem198b (ENSLCRG00005016541)	ENSLCRG00005016526	MAP3K2 (ENSLCRG00005016498)	ENSLCRG00005016404	sumo1 (ENSLCRG00005016398)	ENSLCRG00005016387	ENSLCRG00005016329	ENSLCRG00005016210	ENSLCRG00005016124 #22	ENSLCRG00005016113 #26	ENSLCRG00005016104	ENSLCRG00005016089
Tetraodontidae	ANCESTRAL SPECIES	26	ENSGT00530000063599.B	ENSGT00390000006330.a.a.b	ENSGT00390000010463.a.b.c.a	ENSGT01050000244905.A.a	ENSGT00940000167649	ENSGT00390000000288	ENSGT00940000155212.ab.a	ENSGT00940000154319	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b.b	ENSGT00940000155522.g.b	ENSGT00390000003164	ENSGT00940000154095.b.b.a.a	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT00940000159144.B	ENSGT00940000165189	ENSGT00940000155021	ENSGT00390000005581.a	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT01030000235020	ENSGT00500000044890.a.a.f	ENSGT00940000157308.h	ENSGT00940000153737.b.g.a	ENSGT00940000156153.y.b
Fugu	MODERN SPECIES	20	mfsd6a (ENSTRUG00000000080)	nab1a (ENSTRUG00000000082)	glsa (ENSTRUG00000000086)	stat1a (ENSTRUG00000000102)	mstna (ENSTRUG00000000132)	aatf (ENSTRUG00000000154)	SHROOM2 (ENSTRUG00000000157)	sumo1 (ENSTRUG00000031534)	MAP3K2 (ENSTRUG00000000166)	ENSTRUG00000000196	tmem198b (ENSTRUG00000020489)	desmb (ENSTRUG00000000247)	dnpep (ENSTRUG00000000306)	PTPRN (ENSTRUG00000000335)	ENSTRUG00000025589	ENSTRUG00000000362 #22	ENSTRUG00000000396 #26	ENSTRUG00000028652	zgc:65895 (ENSTRUG00000024740)	ENSTRUG00000026454	CYP4F8 (ENSTRUG00000000482)	ENSTRUG00000000720	ftcd (ENSTRUG00000000589)	abi3bpb (ENSTRUG00000000774)	ENSTRUG00000000964	senp7b (ENSTRUG00000020241)	ENSTRUG00000027848	ENSTRUG00000025605	mid1ip1b (ENSTRUG00000019505)	tspan7b (ENSTRUG00000021695)	XDH (ENSTRUG00000001334)
Tetraodon	MODERN SPECIES	18	mfsd6a (ENSTNIG00000017164)	nab1a (ENSTNIG00000017163)	glsa (ENSTNIG00000017162)	stat1a (ENSTNIG00000017161)	mstna (ENSTNIG00000017160)	aatf (ENSTNIG00000017159)	SHROOM2 (ENSTNIG00000017158)	sumo1 (ENSTNIG00000017157)	MAP3K2 (ENSTNIG00000017156)	ENSTNIG00000000517	tmem198b (ENSTNIG00000017155)	desmb (ENSTNIG00000017154)	dnpep (ENSTNIG00000017153)	PTPRN (ENSTNIG00000017152)	ENSTNIG00000017151	ENSTNIG00000017150 #22	ENSTNIG00000017149 #26	ENSTNIG00000017148	ENSTNIG00000011102	cyp4f3 (ENSTNIG00000006739)	CYP4F8 (ENSTNIG00000017147)	ftcd (ENSTNIG00000006740)	ENSTNIG00000019635	abi3bpb (ENSTNIG00000006602)	ENSTNIG00000006601	bcor (ENSTNIG00000006600)	tspan7b (ENSTNIG00000006599)	XDH (ENSTNIG00000006598)	ENSTNIG00000006597	dnajc27 (ENSTNIG00000006596)	ENSTNIG00000006595
Ovalentaria	ANCESTRAL SPECIES	23	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.b	ENSGT01090000260459	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000178886	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT00940000156167.a	ENSGT00950000183034.A.g
Atherinomorphae	ANCESTRAL SPECIES	24	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01090000260459	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT00940000163254	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a
Cyprinodontiformes	ANCESTRAL SPECIES	26	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01090000260459	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000171777	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000005130	ENSGT00940000159144.A.e.a
Aplocheiloidei	ANCESTRAL SPECIES	80	ENSGT00530000063186.b.b	ENSGT01030000234570.d.a.p	ENSGT00940000157652	ENSGT00940000156597.a.b.a	ENSGT00640000091496	ENSGT00940000158398	ENSGT00390000003114.e.b.a	ENSGT00530000063607.b.j.b	ENSGT00390000002215.i.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00390000017860.a.b.f	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f
Mangrove rivulus	MODERN SPECIES	308										pou3f3b (ENSKMAG00000002995)	mrps9 (ENSKMAG00000003005)	ENSKMAG00000003017	jagn1b (ENSKMAG00000003035)	ENSKMAG00000003057	ENSKMAG00000003090	ENSKMAG00000003209 #22	ENSKMAG00000003231 #26	ENSKMAG00000003256	ENSKMAG00000003291
Turquoise killifish	MODERN SPECIES	1613	ENSNFUG00015003871	OSBPL11 (ENSNFUG00015003923)	GPD1C (ENSNFUG00015003969)	NCKAP5 (ENSNFUG00015003981)	LYPD1 (ENSNFUG00015003990)	actr3 (ENSNFUG00015003996)	ENSNFUG00015004005	ENSNFUG00015004012	ENSNFUG00015004015	POU3F3B (ENSNFUG00015004017)	mrps9 (ENSNFUG00015004033)	SLAIN1 (ENSNFUG00015004070)	jagn1b (ENSNFUG00015004083)	ENSNFUG00015004097	ENSNFUG00015004185	WBP4 (ENSNFUG00015004530) #22	MTRF1 (ENSNFUG00015004546) #26	TSC22D1 (ENSNFUG00015004555)	NELFA (ENSNFUG00015004572)	FAAH2 (ENSNFUG00015004612)	TESK1 (ENSNFUG00015004650)	pik3c3 (ENSNFUG00015004681)	ENSNFUG00015004797	RGP1 (ENSNFUG00015004827)	GBA2 (ENSNFUG00015004861)	C4orf48 (ENSNFUG00015004928)	NAT8L (ENSNFUG00015004936)	poln (ENSNFUG00015004948)	haus3 (ENSNFUG00015004980)	ENSNFUG00015004994	PTGR1 (ENSNFUG00015005021)
Cyprinodontoidei	ANCESTRAL SPECIES	26	ENSGT00940000177589	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01090000260459	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000005130	ENSGT00940000159144.A.e.a
Poeciliinae	ANCESTRAL SPECIES	23	ENSGT00940000177589	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01090000260600	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000005130	ENSGT00940000159144.A.e.a
Poecilia	ANCESTRAL SPECIES	111									ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f
NAME_6	ANCESTRAL SPECIES	426												ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375
Amazon molly	MODERN SPECIES	851									ENSPFOG00000000917	STS (ENSPFOG00000000780)	ENSPFOG00000000690	COL8A1 (ENSPFOG00000000661)	jagn1b (ENSPFOG00000000641)	ENSPFOG00000021772	ENSPFOG00000000337	ENSPFOG00000000295 #22	ENSPFOG00000000254 #26	ENSPFOG00000000227
Sailfin molly	MODERN SPECIES	3466																ENSPLAG00000014276 #22	ENSPLAG00000014280 #26
Guppy	MODERN SPECIES	450	ENSPREG00000019176	ENSPREG00000019170	ENSPREG00000019159	ENSPREG00000019144	ENSPREG00000019114	ENSPREG00000019104	ccdc28a (ENSPREG00000019061)	ENSPREG00000019034	FILIP1L (ENSPREG00000019013)	ENSPREG00000018915	ENSPREG00000018870	COL8A1 (ENSPREG00000018854)	jagn1b (ENSPREG00000018840)	ENSPREG00000018828	ENSPREG00000018663	ENSPREG00000018630 #22	MTRF1 (ENSPREG00000018619) #26	ENSPREG00000018602	ENSPREG00000018586	HECW2 (ENSPREG00000018477)	gtf3c3 (ENSPREG00000018422)	DONSON (ENSPREG00000018398)	runx1 (ENSPREG00000018387)	ENSPREG00000018377	ENSPREG00000018356	ENSPREG00000018338	slx9 (ENSPREG00000018296)	adarb1a (ENSPREG00000018254)	cep70 (ENSPREG00000018184)	sowahcb (ENSPREG00000018168)	dhrsx (ENSPREG00000018161)
Platyfish	MODERN SPECIES	16	inha (ENSXMAG00000000511)	spega (ENSXMAG00000000514)	CTDSP1 (ENSXMAG00000000525)	obsl1a (ENSXMAG00000000533)	ENSXMAG00000013209	ENSXMAG00000028735	ATP1A1 (ENSXMAG00000008520)	ENSXMAG00000009972	ccdc28a (ENSXMAG00000022750)	ENSXMAG00000009965	FILIP1L (ENSXMAG00000009955)	COL8A1 (ENSXMAG00000022370)	jagn1b (ENSXMAG00000009941)	ENSXMAG00000009933	ENSXMAG00000009878	ENSXMAG00000029739 #22	ENSXMAG00000009853 #26	ENSXMAG00000009852	ENSXMAG00000026199	ENSXMAG00000020169	ENSXMAG00000009847	ENSXMAG00000025376	ENSXMAG00000023949	ENSXMAG00000022662	ENSXMAG00000009824	atg3 (ENSXMAG00000009806)	SLC19A2 (ENSXMAG00000009795)	ENSXMAG00000028105	ENSXMAG00000009779	atp1b1b (ENSXMAG00000027546)	CNGA3 (ENSXMAG00000009749)
NAME_4	ANCESTRAL SPECIES	202													ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b	ENSGT00390000009987	ENSGT00940000160630	ENSGT01030000234579.C.n	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490
Mummichog	MODERN SPECIES	861																ENSFHEG00000019032 #22	ENSFHEG00000019043 #26	ENSFHEG00000019057	ENSFHEG00000019071
Sheepshead minnow	MODERN SPECIES	855										COL8A1 (ENSCVAG00000021890)	ENSCVAG00000021887	cfap52 (ENSCVAG00000021873)	jagn1b (ENSCVAG00000021827)	ENSCVAG00000021814	ENSCVAG00000021783	ENSCVAG00000021735 #22	MTRF1 (ENSCVAG00000021729) #26	ENSCVAG00000021726	ENSCVAG00000021720	ENSCVAG00000021697	CARS2 (ENSCVAG00000021690)	ENSCVAG00000021684	atg3 (ENSCVAG00000021673)
Oryzias	ANCESTRAL SPECIES	26													ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b.c	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a	ENSGT00940000155972.A.h	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f
Oryzias_b	ANCESTRAL SPECIES	24	ENSGT00390000005935	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158272.c.a	ENSGT00940000169105	ENSGT00950000182852.A.a.b.c	ENSGT00940000158839	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b.c	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a	ENSGT00940000155972.A.h	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f
Javanese ricefish	MODERN SPECIES	11	stk11ip (ENSOJAG00000011798)	ENSOJAG00000011828	inha (ENSOJAG00000011912)	CTDSP1 (ENSOJAG00000012413)	obsl1a (ENSOJAG00000012480)	atp1a1a.2 (ENSOJAG00000012725)	ENSOJAG00000013034	ENSOJAG00000013051	ccdc28a (ENSOJAG00000013081)	COL8A1 (ENSOJAG00000013092)	ENSOJAG00000013101	FILIP1L (ENSOJAG00000013129)	ENSOJAG00000013138	jagn1b (ENSOJAG00000013151)	ENSOJAG00000013175	ENSOJAG00000013637 #22	MTRF1 (ENSOJAG00000013650) #26	ENSOJAG00000013662	ENSOJAG00000013694	nufip1 (ENSOJAG00000013715)	nop58 (ENSOJAG00000013730)	wdr12 (ENSOJAG00000013804)	ical1 (ENSOJAG00000013853)	FAM117B (ENSOJAG00000013886)	bmpr2a (ENSOJAG00000013951)	ENSOJAG00000014651	slc15a1b (ENSOJAG00000017657)	stk24b (ENSOJAG00000018956)	ENSOJAG00000019122	gcga (ENSOJAG00000020168)	dpp4 (ENSOJAG00000020207)
Indian medaka	MODERN SPECIES	749																ENSOMEG00000009888 #22
Oryzias_a	ANCESTRAL SPECIES	28													ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000163647	ENSGT00940000159144.A.f	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b.c	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A.h	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d	ENSGT00390000005372.f
Chinese medaka	MODERN SPECIES	841															ENSOSIG00000021859	ENSOSIG00000021868 #22	ENSOSIG00000021869 #26	ENSOSIG00000021872	ENSOSIG00000021879	ENSOSIG00000021884	ENSOSIG00000021887	nop58 (ENSOSIG00000021900)	wdr12 (ENSOSIG00000021912)	ical1 (ENSOSIG00000021917)	FAM117B (ENSOSIG00000021921)	bmpr2a (ENSOSIG00000021964)
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000003454	ENSORLG00000003440	ENSORLG00000026955	ENSORLG00000003433	ENSORLG00000024386	ENSORLG00000028702	ENSORLG00000023301	scn1lab (ENSORLG00000003411)	ENSORLG00000026351	ENSORLG00000003424	ENSORLG00000003353	gca (ENSORLG00000003319)	JAGN1 (ENSORLG00000003292)	ENSORLG00000022896	ENSORLG00000003276	ENSORLG00000003254 #22	ENSORLG00000003225 #26	ENSORLG00000003208	nufip1 (ENSORLG00000024782)	nop58 (ENSORLG00000003162)	wdr12 (ENSORLG00000003110)	ical1 (ENSORLG00000003074)	FAM117B (ENSORLG00000003049)	bmpr2a (ENSORLG00000003034)	ENSORLG00000003004	ENSORLG00000029661	slc15a1b (ENSORLG00000002922)	stk24b (ENSORLG00000002850)	ENSORLG00000002809	GCG (ENSORLG00000002782)	ENSORLG00000002736
Ovalentaria_B	ANCESTRAL SPECIES	22	ENSGT00940000163418.D	ENSGT01040000240451.a.a.d	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000178886	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT00940000156167.a	ENSGT00950000183034.A.g
Cichlidae	ANCESTRAL SPECIES	27	ENSGT00940000156702.a.b.b	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT00940000154840.b.f.c.b.g	ENSGT01100000263585	ENSGT00940000154840.b.f.c.a	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000178886	ENSGT00940000155318.b.b	ENSGT00390000010543	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b	ENSGT00940000156167.a	ENSGT00950000183034.A.g
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.g	ENSGT01100000263585.k.b.a	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.l	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000178886	ENSGT00940000155318.b.b	ENSGT00390000010543.w	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b.a.b.b	ENSGT01050000244823.d.b.a.b.b	ENSGT01050000244823.d.b.a.b.a.b.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.g.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.l	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000178886	ENSGT00940000155318.b.b	ENSGT00390000010543.w	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b.a.b.b	ENSGT01050000244823.d.b.a.b.b	ENSGT01050000244823.d.b.a.b.a.b.a
Haplochromini	ANCESTRAL SPECIES	38	ENSGT00940000154840.b.f.c.b.g.b	ENSGT01100000263585.k.b.a.a.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.l	ENSGT00940000154790.a.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00390000010543.w.a.a.a	ENSGT00940000155318.b.b	ENSGT00390000010543.w.a.a.b	ENSGT00940000177017	ENSGT00390000010543.w.b	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b.a.b.b
Burton s mouthbrooder	MODERN SPECIES	492	ENSHBUG00000021359	ENSHBUG00000000658	ENSHBUG00000021275	ENSHBUG00000021193	ENSHBUG00000021178	ENSHBUG00000021146	ATP1A1 (ENSHBUG00000021121)	ENSHBUG00000021064	ccdc28a (ENSHBUG00000021039)	ENSHBUG00000021030	FILIP1L (ENSHBUG00000020981)	ENSHBUG00000020967	jagn1b (ENSHBUG00000020947)	ENSHBUG00000020958	ENSHBUG00000020932	ENSHBUG00000020880 #22	ENSHBUG00000000644	ENSHBUG00000020861 #26	ENSHBUG00000020842
Haplochromini_A	ANCESTRAL SPECIES	42	ENSGT01100000263585.k.b.a.a.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.l	ENSGT00940000154790.a.a.a	ENSGT00530000064692.B.b.b.d.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000178584	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00390000010543.w.a.a.a	ENSGT00940000155318.b.b	ENSGT00390000010543.w.a.a.b	ENSGT00940000177017	ENSGT00390000010543.w.b	ENSGT00940000156365	ENSGT00940000157860	ENSGT00940000178792	ENSGT00390000000292.B	ENSGT00390000013073
Haplochromini_B	ANCESTRAL SPECIES	48	ENSGT00940000154840.b.f.c.b.g.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.l	ENSGT00940000154790.a.a.a	ENSGT00530000064692.B.b.b.d.a.a	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00950000182852.A.a.b.c	ENSGT00940000169105	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000163647	ENSGT01030000234635.a.b.a.b.a	ENSGT00390000010543.w.a.a.a	ENSGT00940000155318.b.b	ENSGT00390000010543.w.a.a.b	ENSGT00390000010543.w.b	ENSGT00940000156365	ENSGT00940000157860	ENSGT00940000178792	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT01050000244823.d.b.a.b.a.b.b	ENSGT01050000244823.d.b.a.b.b
Eastern happy	DUPLICATION
Eastern happy	MODERN SPECIES	14	ENSACLG00000023504	ENSACLG00000023544	ENSACLG00000023606	ATP1A1 (ENSACLG00000023619)	ENSACLG00000023651	ENSACLG00000023697	ENSACLG00000023720	ccdc28a (ENSACLG00000023727)	ENSACLG00000023736	FILIP1L (ENSACLG00000023767)	ENSACLG00000023781	ENSACLG00000023818	jagn1b (ENSACLG00000023842)	ENSACLG00000023823	ENSACLG00000023863	ENSACLG00000023922 #22	MTRF1 (ENSACLG00000023945) #26	ENSACLG00000023974	ENSACLG00000024001	chn1 (ENSACLG00000024013)	FARP1 (ENSACLG00000024105)	ENSACLG00000024217	GGACT (ENSACLG00000024220)	GGACT (ENSACLG00000024222)	GGACT (ENSACLG00000024225)	arl13b (ENSACLG00000024227)	ENSACLG00000024338	ENSACLG00000024340	ENSACLG00000024343	NCAM2 (ENSACLG00000024511)	ENSACLG00000024546
Eastern happy	MODERN SPECIES	95												col8a1a (ENSACLG00000016518)	jagn1b (ENSACLG00000016497)	ENSACLG00000016440	ENSACLG00000016322	ENSACLG00000016300 #22
Zebra mbuna	MODERN SPECIES	1105	atp5f1b (ENSMZEG00005018008)	ENSMZEG00005018004	klhl41b (ENSMZEG00005018003)	oxgr1a.2 (ENSMZEG00005018000)	ENSMZEG00005017998	dzip1 (ENSMZEG00005017989)	CLDN10 (ENSMZEG00005017983)	ENSMZEG00005017977	cldn10a (ENSMZEG00005017972)	abcc4 (ENSMZEG00005017960)	ENSMZEG00005017952	ENSMZEG00005017948	jagn1b (ENSMZEG00005017943)	ENSMZEG00005017936	ENSMZEG00005017930	ENSMZEG00005017926 #22	MTRF1 (ENSMZEG00005017922) #26	ENSMZEG00005017917	ENSMZEG00005017911	chn1 (ENSMZEG00005017904)	GGACT (ENSMZEG00005017899)	FARP1 (ENSMZEG00005017864)	GGACT (ENSMZEG00005017844)	GGACT (ENSMZEG00005017840)	GGACT (ENSMZEG00005017836)	arl13b (ENSMZEG00005017827)	NCAM2 (ENSMZEG00005017818)	ENSMZEG00005017816	gart (ENSMZEG00005017801)	n6amt1 (ENSMZEG00005017792)	ENSMZEG00005017786
P. nyererei	MODERN SPECIES	902															ENSPNYG00000004400	ENSPNYG00000004384 #22	MTRF1 (ENSPNYG00000004357) #26	ENSPNYG00000004345	ENSPNYG00000004324	ENSPNYG00000004300
Lyretail cichlid	MODERN SPECIES	315	ATP1A1 (ENSNBRG00000005416)	ENSNBRG00000005153	ENSNBRG00000005085	ENSNBRG00000005065	ENSNBRG00000004998	ATP1A1 (ENSNBRG00000004921)	ENSNBRG00000004895	ENSNBRG00000004876	ccdc28a (ENSNBRG00000004859)	ENSNBRG00000004805	FILIP1L (ENSNBRG00000004784)	ENSNBRG00000004754	COL8A1 (ENSNBRG00000004746)	jagn1b (ENSNBRG00000004740)	ENSNBRG00000004673	ENSNBRG00000004655 #22	MTRF1 (ENSNBRG00000004634) #26	ENSNBRG00000004614	ENSNBRG00000004607	chn1 (ENSNBRG00000004568)	ENSNBRG00000004547	FARP1 (ENSNBRG00000004166)	arl13b (ENSNBRG00000004078)	NCAM2 (ENSNBRG00000004009)	gart (ENSNBRG00000003935)	n6amt1 (ENSNBRG00000003897)	ENSNBRG00000003885	ENSNBRG00000003862	ENSNBRG00000003838	ENSNBRG00000003826	cbsa (ENSNBRG00000003769)
Nile tilapia	MODERN SPECIES	14	ENSONIG00000001008	ENSONIG00000034265	ENSONIG00000029879	ENSONIG00000034706	ENSONIG00000041158	ENSONIG00000032946	ENSONIG00000039414	ENSONIG00000025979	ENSONIG00000028996	ENSONIG00000029071	ENSONIG00000040193	ENSONIG00000013857	ENSONIG00000030870	ENSONIG00000029298	ENSONIG00000012473	ENSONIG00000012474 #22	ENSONIG00000012476 #26	ENSONIG00000012478	ENSONIG00000030511	ENSONIG00000012479	chn1 (ENSONIG00000001851)	ENSONIG00000030387	FARP1 (ENSONIG00000001858)	GGACT (ENSONIG00000033293)	GGACT (ENSONIG00000035702)	GGACT (ENSONIG00000020836)	GGACT (ENSONIG00000033044)	ENSONIG00000042078	arl13b (ENSONIG00000001864)	ENSONIG00000034246	NCAM2 (ENSONIG00000001866)
Midas cichlid	MODERN SPECIES	971	ENSACIG00000002015	ENSACIG00000001965	ENSACIG00000001901	ENSACIG00000001848	ENSACIG00000001836	ATP1A1 (ENSACIG00000001788)	ENSACIG00000001741	ENSACIG00000001713	ccdc28a (ENSACIG00000001700)	ENSACIG00000001652	FILIP1L (ENSACIG00000001638)	ENSACIG00000001621	COL8A1 (ENSACIG00000001609)	jagn1b (ENSACIG00000001599)	ENSACIG00000001551	ENSACIG00000001515 #22	MTRF1 (ENSACIG00000001495) #26	ENSACIG00000001488	ENSACIG00000001473	ENSACIG00000001459
Pomacentridae	ANCESTRAL SPECIES	177						ENSGT00390000013073	ENSGT00390000000292.B	ENSGT00940000157860	ENSGT00940000156365	ENSGT00390000010543	ENSGT00940000155318.b.b	ENSGT00940000155318.a.a	ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b.h	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a
Pomacentridae_A	ANCESTRAL SPECIES	244																ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT01000000214434.B.a.b.h	ENSGT00940000153695.B	ENSGT00390000005596.a
Amphiprion	ANCESTRAL SPECIES	237											ENSGT00390000000292.B.h	ENSGT00940000157860	ENSGT00940000156365	ENSGT00390000010543	ENSGT00940000155318.b.b	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00940000175375	ENSGT00940000159144.A.e.a	ENSGT01030000234635.a.b.a.b.a	ENSGT01000000214434.B.a.b.h	ENSGT00940000153695.B	ENSGT00390000005596.a	ENSGT00390000000292.B.g	ENSGT00390000013073
Clown anemonefish	MODERN SPECIES	3263										mbtps1 (ENSAOCG00000001608)	pskh1 (ENSAOCG00000022203)	ENSAOCG00000000039	arl13b (ENSAOCG00000002828)	ggact.3 (ENSAOCG00000002829)	FARP1 (ENSAOCG00000002830)	ENSAOCG00000002831 #22	ENSAOCG00000002832 #26	ENSAOCG00000002833	zgc:65895 (ENSAOCG00000002834)	chn1 (ENSAOCG00000002835)	ENSAOCG00000002836	ENSAOCG00000002549	jagn1b (ENSAOCG00000000040)	ENSAOCG00000002837	gart (ENSAOCG00000002838)	n6amt1 (ENSAOCG00000002525)
Orange clownfish	MODERN SPECIES	16	ENSAPEG00000013811	ccdc28a (ENSAPEG00000013881)	ENSAPEG00000013974	ATP1A1 (ENSAPEG00000014030)	ENSAPEG00000014118	ENSAPEG00000014141	obsl1a (ENSAPEG00000014228)	CTDSP1 (ENSAPEG00000014300)	spega (ENSAPEG00000014333)	inha (ENSAPEG00000014437)	ENSAPEG00000014463	NCAM2 (ENSAPEG00000014541)	arl13b (ENSAPEG00000014654)	ggact.3 (ENSAPEG00000014676)	FARP1 (ENSAPEG00000014702)	ENSAPEG00000014824 #22	ENSAPEG00000014844 #26	ENSAPEG00000014854	zgc:65895 (ENSAPEG00000014874)	chn1 (ENSAPEG00000014893)	ENSAPEG00000014954	ENSAPEG00000015009	jagn1b (ENSAPEG00000015055)	gart (ENSAPEG00000015076)	n6amt1 (ENSAPEG00000015144)	cyp4f3 (ENSAPEG00000015277)	ENSAPEG00000015384	SLC19A1 (ENSAPEG00000015397)	ENSAPEG00000015412	arpc2 (ENSAPEG00000015419)	ENSAPEG00000015446
Spiny chromis	MODERN SPECIES	988															ENSAPOG00000010232	ENSAPOG00000010206 #22	ENSAPOG00000010181 #26	ENSAPOG00000010170	chn1 (ENSAPOG00000010159)	ENSAPOG00000010093	ENSAPOG00000010016	jagn1b (ENSAPOG00000009974)	gart (ENSAPOG00000009958)	n6amt1 (ENSAPOG00000009868)
Bicolor damselfish	MODERN SPECIES	1907															ENSSPAG00000000859	ENSSPAG00000000884 #22	ENSSPAG00000000881 #26	ENSSPAG00000000892	ENSSPAG00000000909	zgc:65895 (ENSSPAG00000000928)	chn1 (ENSSPAG00000000944)	ENSSPAG00000000992
Tiger tail seahorse	MODERN SPECIES	404	ENSHCOG00000010143	ENSHCOG00000010088	mettl21a (ENSHCOG00000010040)	CREB1 (ENSHCOG00000010030)	klf7a (ENSHCOG00000009996)	si:ch211-93g23.2 (ENSHCOG00000009980)	RAMP1 (ENSHCOG00000009924)	erbb4a (ENSHCOG00000009913)	lancl1 (ENSHCOG00000009845)	mylz3 (ENSHCOG00000009814)	acadl (ENSHCOG00000009801)	ENSHCOG00000009777	UNC80 (ENSHCOG00000009729)	ENSHCOG00000009522	ENSHCOG00000009483	ENSHCOG00000009465 #22	ENSHCOG00000009449 #26	ENSHCOG00000009428	ENSHCOG00000009410	cers5 (ENSHCOG00000009402)	slmapb (ENSHCOG00000009375)	abhd6b (ENSHCOG00000009366)	kctd6b (ENSHCOG00000009336)	ENSHCOG00000009321	ognb (ENSHCOG00000009316)	YWHAB (ENSHCOG00000009295)	pabpc1l (ENSHCOG00000009270)	rbm39b (ENSHCOG00000009222)	rh50 (ENSHCOG00000009197)	ENSHCOG00000009190	eif2d (ENSHCOG00000009140)
Pinecone sodierfish	MODERN SPECIES	11	ENSMMDG00005015466	ENSMMDG00005015423	ENSMMDG00005015409	ENSMMDG00005015403	atp1a1a.2 (ENSMMDG00005007789)	ENSMMDG00005007670	ccdc28a (ENSMMDG00005007667)	ENSMMDG00005007661	FILIP1L (ENSMMDG00005007656)	ENSMMDG00005007651	ENSMMDG00005007649	ENSMMDG00005007647	jagn1b (ENSMMDG00005007646)	ENSMMDG00005007497	ENSMMDG00005006907	ENSMMDG00005006897 #22	ENSMMDG00005006895 #26	ENSMMDG00005006894	ENSMMDG00005006891	chn1 (ENSMMDG00005006516)	FARP1 (ENSMMDG00005006372)	ggact.3 (ENSMMDG00005006356)	arl13b (ENSMMDG00005006351)	NCAM2 (ENSMMDG00005006348)	gart (ENSMMDG00005006281)	n6amt1 (ENSMMDG00005006265)	ENSMMDG00005006262	stoml2 (ENSMMDG00005005130) ##10	ENSMMDG00005005088	ENSMMDG00005005078	cbsa (ENSMMDG00005001061)
Cod	MODERN SPECIES	20	ENSGMOG00000022576	ENSGMOG00000031382	ENSGMOG00000003556	ENSGMOG00000036311	ENSGMOG00000033699	ENSGMOG00000029749	ENSGMOG00000035685	ENSGMOG00000019438	ENSGMOG00000015738	ENSGMOG00000034045	ENSGMOG00000012700	ENSGMOG00000024579	ENSGMOG00000032649	ENSGMOG00000027206	ENSGMOG00000008582	ENSGMOG00000028254 #22	ENSGMOG00000008608 #26	ENSGMOG00000022449	ENSGMOG00000034151	ENSGMOG00000020292	ENSGMOG00000018628	ENSGMOG00000030030	ENSGMOG00000031862	ENSGMOG00000033496	ENSGMOG00000027907	ENSGMOG00000036518	ENSGMOG00000028683	ENSGMOG00000035671	ENSGMOG00000023801	VPS26C (ENSGMOG00000008657)	ENSGMOG00000033327
Protacanthopterygii	ANCESTRAL SPECIES	46	ENSGT00940000157874.q.a	ENSGT00940000157872	ENSGT00940000157849.n.c	ENSGT00940000155360.B.k	ENSGT00940000163243	ENSGT00390000008846	ENSGT00940000159205	ENSGT00940000163031.b.a.a	ENSGT00390000018553	ENSGT00940000164275.f	ENSGT00940000157360.c	ENSGT00390000017581.b.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000160040.B.a.a	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160580.b	ENSGT00940000160280.d	ENSGT00940000161021.a.b	ENSGT00890000139496.a	ENSGT00940000155893.b	ENSGT00940000155708	ENSGT00950000183196.B.e.f	ENSGT01080000257342.H.b
Salmoninae	ANCESTRAL SPECIES	226	ENSGT00940000163243.f	ENSGT00390000008846.a	ENSGT00940000159205.fb	ENSGT00940000163031.b.a.a	ENSGT00390000018553.e.a	ENSGT00940000164275.f.e	ENSGT00940000157360.c.i	ENSGT00390000017581.b.b.c	ENSGT00390000018553.e.b	ENSGT00940000164275.f.f	ENSGT00940000157360.c.j.b.a	ENSGT00390000017581.b.b.d	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204.f.a	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877.g #26	ENSGT01070000253816.a.a.b.p #35	ENSGT00390000005130	ENSGT00940000160040.B.a.a.f	ENSGT01050000244924.a.a.b.a.b.e.b	ENSGT00940000160580.b	ENSGT00940000160280.d.c.b	ENSGT00940000160040.B.a.a.e	ENSGT01050000244924.a.a.b.a.b.f	ENSGT00940000160280.d.d	ENSGT00940000161021.a.b	ENSGT00890000139496.a	ENSGT00940000155893.b	ENSGT00940000155708.f.b	ENSGT00950000183196.B.e.f.b.a
Huchen	DUPLICATION
Huchen	MODERN SPECIES	5288													ENSHHUG00000028317	mrps9 (ENSHHUG00000028302)	ENSHHUG00000028290	ENSHHUG00000028280 #22	MTRF1 (ENSHHUG00000028271) #26	ENSHHUG00000028265	efna2a (ENSHHUG00000028257)	ENSHHUG00000028246
Huchen	MODERN SPECIES	3798														mrps9 (ENSHHUG00000043028)	ENSHHUG00000043029	ENSHHUG00000043034 #22	ENSHHUG00000043035 #26	ENSHHUG00000043038	efna2a (ENSHHUG00000043041)	ptbp1a (ENSHHUG00000043044)	ENSHHUG00000043123
Salmoninae_a	ANCESTRAL SPECIES	114	ENSGT00390000008846.a	ENSGT00940000159205.gb.a	ENSGT00390000011204.e	ENSGT00390000017860.a.b.f.e	ENSGT00940000156877.g.b #26	ENSGT00940000159205.fb	ENSGT00940000163031.b.a.a	ENSGT00390000018553.e.a	ENSGT00940000164275.f.e	ENSGT00940000157360.c.i.b	ENSGT00940000157360.c.j.b.a	ENSGT00390000017581.b.b.d	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204.f.a	ENSGT00390000017860.a.b.f.f	ENSGT00390000013956 #22	ENSGT00940000156877.g.a #26	ENSGT01070000253816.a.a.b.p #35	ENSGT00390000005130	ENSGT00940000160040.B.a.a.e.a	ENSGT00940000160580.b	ENSGT00940000160040.B.a.a.f	ENSGT01050000244924.a.a.b.a.b.e.b	ENSGT00940000160280.d.c.b	ENSGT00940000160040.B.a.a.e.b	ENSGT01050000244924.a.a.b.a.b.f	ENSGT00940000160280.d.d	ENSGT00940000161021.a.b	ENSGT00890000139496.a.g	ENSGT00940000155893.b	ENSGT00940000155708.f.b
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	74	ENSGT00940000163243.f	ENSGT00390000008846.a.d	ENSGT00940000159205.fb.b	ENSGT00390000008846.a.c	ENSGT00940000159205.fb.a.b	ENSGT00940000163031.b.a.a.f	ENSGT00390000018553.e.b	ENSGT00940000164275.f.f	ENSGT00940000157360.c.j.b.a	ENSGT00940000164275.f.e	ENSGT00940000157360.c.i.a	ENSGT00390000017581.b.b.d	ENSGT00940000164385.a.a.a.b.h	ENSGT00390000011204.f.a	ENSGT00390000017860.a.b.f.f	ENSGT00390000013956.o #22	ENSGT00940000156877.g.a #26	ENSGT01070000253816.a.a.b.p.a #35	ENSGT00390000005130	ENSGT00940000160040.B.a.a.e.a	ENSGT01050000244924.a.a.b.a.b.f.a	ENSGT00940000160280.d.d.a	ENSGT00940000161021.a.b.e	ENSGT00890000139496.a.g	ENSGT00940000155893.b.h	ENSGT00940000155708.f.b	ENSGT00950000183196.B.e.f.b.b.a	ENSGT01080000257342.H.b.m.b
Rainbow trout	MODERN SPECIES	28	arhgef7b (ENSOMYG00000010640)	ENSOMYG00000011183	lipt1 (ENSOMYG00000011323)	ENSOMYG00000011281	ENSOMYG00000011335	ENSOMYG00000011360	ENSOMYG00000011384	inpp4ab (ENSOMYG00000011410)	ENSOMYG00000011513	ENSOMYG00000069545	ENSOMYG00000069232	pou3f3b (ENSOMYG00000011528)	ENSOMYG00000066265	mrps9 (ENSOMYG00000067764)	ENSOMYG00000011694	ENSOMYG00000011798 #22	ENSOMYG00000001912 #26	ENSOMYG00000001266 #35	ENSOMYG00000001958	ENSOMYG00000001298	ptbp1a (ENSOMYG00000048355)	ENSOMYG00000059593	ENSOMYG00000072184	ENSOMYG00000054355	ENSOMYG00000067596	cldn11a (ENSOMYG00000001995)	slc7a14a (ENSOMYG00000002080)	slc2a2 (ENSOMYG00000002245)	ENSOMYG00000002304	tnika (ENSOMYG00000002547)	ENSOMYG00000055234
Oncorhynchus_a	ANCESTRAL SPECIES	192													ENSGT00940000164385.a.a.a.b.h	ENSGT00390000011204.f.a	ENSGT00390000017860.a.b.f.f	ENSGT00390000013956.o #22	ENSGT00940000156877.g.a #26	ENSGT01070000253816.a.a.b.p.a #35	ENSGT00390000005130	ENSGT00940000160040.B.a.a.e.a	ENSGT01050000244924.a.a.b.a.b.f.a	ENSGT00940000160280.d.d.a	ENSGT00940000161021.a.b.e	ENSGT00890000139496.a.g	ENSGT00940000155893.b.h
Coho salmon	MODERN SPECIES	25	ATP11A (ENSOKIG00005017874)	arhgef7b (ENSOKIG00005018087)	ENSOKIG00005018911	lipt1 (ENSOKIG00005019106)	tsga10 (ENSOKIG00005019118)	ENSOKIG00005019152	unc50 (ENSOKIG00005019172)	inpp4ab (ENSOKIG00005019209)	ENSOKIG00005019508	ENSOKIG00005019513	ENSOKIG00005019520	ENSOKIG00005019544	pou3f3b (ENSOKIG00005019565)	mrps9 (ENSOKIG00005019589)	ENSOKIG00005019625	ENSOKIG00005019647 #22	MTRF1 (ENSOKIG00005019660) #26	ENSOKIG00005019684 #35	ENSOKIG00005019696	ENSOKIG00005019720	ptbp1a (ENSOKIG00005019747)	PLPPR3 (ENSOKIG00005019860)	ENSOKIG00005019903	cldn11a (ENSOKIG00005020491)	slc7a14a (ENSOKIG00005020500)	GHSR (ENSOKIG00005020526)	pld1a (ENSOKIG00005020738)	ELAVL1 (ENSOKIG00005027108)	slc1a8b (ENSOKIG00005027226)	ENSOKIG00005027241	ENSOKIG00005027249
Chinook salmon	MODERN SPECIES	178													pou3f3b (ENSOTSG00005020954)	mrps9 (ENSOTSG00005020945)	SLAIN1 (ENSOTSG00005020942)	ENSOTSG00005020938 #22	MTRF1 (ENSOTSG00005020935) #26	ENSOTSG00005020931 #35	ENSOTSG00005020910	ptbp1a (ENSOTSG00005020908)	ptbp1a (ENSOTSG00005020759)	ENSOTSG00005020747
Oncorhynchus	ANCESTRAL SPECIES	70												ENSGT00940000164385.a.a.a.b.g	ENSGT01070000253760.b.b.a.a.c.b.d.a.a	ENSGT00390000011204.f.b	ENSGT00390000017860.a.b.f.e	ENSGT00390000013956.p #22	ENSGT00940000156877.g.b #26	ENSGT01070000253816.a.a.b.p.b #35	ENSGT00940000175375	ENSGT00940000160040.B.a.a.e.b	ENSGT01050000244924.a.a.b.a.b.f.b	ENSGT00990000206247.a	ENSGT00890000139496.a.h	ENSGT00940000155893.b.g	ENSGT00940000155708.f.a	ENSGT00950000183196.B.e.f.b.a	ENSGT00940000154674.q.a.e.a	ENSGT00950000182988.a.a.a.l	ENSGT00950000183097.a.b.j	ENSGT00940000154674.q.a.e.b	ENSGT00950000182988.a.a.a.k.a
Oncorhynchus_a	ANCESTRAL SPECIES	92	ENSGT00940000163243.f	ENSGT00390000008846.a.d	ENSGT00940000159205.fb.b	ENSGT00940000159205.fb.a.a	ENSGT00940000163031.b.a.a.f	ENSGT00390000018553.e.b	ENSGT00940000164275.f.f	ENSGT00940000157360.c.j.b.a	ENSGT00940000164275.f.e	ENSGT00940000157360.c.i.a	ENSGT00390000017581.b.b.d	ENSGT00940000164385.a.a.a.b.g	ENSGT01070000253760.b.b.a.a.c.b.d.a.a	ENSGT00390000011204.f.b	ENSGT00390000017860.a.b.f.e	ENSGT00390000013956.p #22	ENSGT00940000156877.g.b #26	ENSGT01070000253816.a.a.b.p.b #35	ENSGT00940000175375	ENSGT00940000160040.B.a.a.e.b	ENSGT01050000244924.a.a.b.a.b.f.b	ENSGT00990000206247.a	ENSGT00890000139496.a.h	ENSGT00940000155893.b.g	ENSGT00940000155708.f.a
Coho salmon	MODERN SPECIES	7	arhgef7b (ENSOKIG00005008724)	ENSOKIG00005007334	lipt1 (ENSOKIG00005007292)	ENSOKIG00005007269	ENSOKIG00005007257	UNC50 (ENSOKIG00005007236)	ENSOKIG00005007227	inpp4ab (ENSOKIG00005006509)	ENSOKIG00005006456	ENSOKIG00005006449	ENSOKIG00005006444	pou3f3b (ENSOKIG00005006420)	ENSOKIG00005006410	mrps9 (ENSOKIG00005006386)	ENSOKIG00005006354	ENSOKIG00005006337 #22	ENSOKIG00005006330 #26	ENSOKIG00005006320 #35	ENSOKIG00005006309	EFNA2 (ENSOKIG00005006303)	ptbp1a (ENSOKIG00005006201)	ENSOKIG00005006142	PLPPR3 (ENSOKIG00005006119)	cldn11a (ENSOKIG00005006092)	slc7a14a (ENSOKIG00005006081)	slc2a2 (ENSOKIG00005005618)	ENSOKIG00005005587	ENSOKIG00005005553	ENSOKIG00005005532	ENSOKIG00005005522	nceh1a (ENSOKIG00005005504)
Rainbow trout	MODERN SPECIES	9	arhgef7b (ENSOMYG00000021518)	ENSOMYG00000022188	lipt1 (ENSOMYG00000022239)	ENSOMYG00000022246	ENSOMYG00000022260	ENSOMYG00000059228	ENSOMYG00000019074	ENSOMYG00000019107	inpp4ab (ENSOMYG00000019295)	ENSOMYG00000019536	ENSOMYG00000069555	pou3f3b (ENSOMYG00000011661)	ENSOMYG00000011538	mrps9 (ENSOMYG00000011552)	ENSOMYG00000073384	ENSOMYG00000065069 #22	ENSOMYG00000011871 #26	ENSOMYG00000055047 #35	ENSOMYG00000050433	ptbp1a (ENSOMYG00000001791)	ENSOMYG00000075091	ENSOMYG00000068301	ENSOMYG00000067927	cldn11a (ENSOMYG00000055325)	slc7a14a (ENSOMYG00000002640)	ENSOMYG00000055324	slc2a2 (ENSOMYG00000051374)	tnika (ENSOMYG00000063166)	ENSOMYG00000002765	ENSOMYG00000052728	ENSOMYG00000019552
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	144					ENSGT00940000159205.gb.b	ENSGT00940000163031.b.a.a.c	ENSGT01090000260365.a.a.b	ENSGT00390000018553.e.a	ENSGT00940000164275.f.e	ENSGT00940000157360.c.i.b	ENSGT00390000017581.b.b.d.a	ENSGT00940000164385.a.a.a.b.e	ENSGT01070000253760.b.b.a.a.c.b.d.a.a	ENSGT00390000011204.f.a	ENSGT00390000017860.a.b.f.f	ENSGT00390000013956.q #22	ENSGT00940000156877.g.a #26	ENSGT01070000253816.a.a.b.p #35	ENSGT00390000005130	ENSGT00940000160040.B.a.a.f	ENSGT01050000244924.a.a.b.a.b.e.b	ENSGT00940000160580.b	ENSGT00940000160280.d.c.b	ENSGT00940000161021.a.b.h	ENSGT00890000139496.a.g	ENSGT00940000155893.b.f	ENSGT00940000155708.f.b	ENSGT00950000183196.B.e.f.b.b.b
River trout	MODERN SPECIES	32	ATP11A (ENSSTUG00000045283)	sox1b (ENSSTUG00000046415)	ARHGEF7 (ENSSTUG00000046486)	ENSSTUG00000047795	tsga10 (ENSSTUG00000047918)	ENSSTUG00000047938	ENSSTUG00000047943	unc50 (ENSSTUG00000047952)	ENSSTUG00000047983	inpp4ab (ENSSTUG00000048010)	ENSSTUG00000048288	pou3f3b (ENSSTUG00000048292)	ENSSTUG00000048298	mrps9 (ENSSTUG00000048302)	ENSSTUG00000048311	ENSSTUG00000048318 #22	ENSSTUG00000048329 #26	ENSSTUG00000048360	ENSSTUG00000023123	efna2a (ENSSTUG00000023172)	ptbp1a (ENSSTUG00000023182)	plppr3a (ENSSTUG00000023197)	cldn11a (ENSSTUG00000023229)	ENSSTUG00000023242	slc7a14a (ENSSTUG00000023261)	slc2a2 (ENSSTUG00000023403)	tnika (ENSSTUG00000023717)	ENSSTUG00000030766	ENSSTUG00000030774	ENSSTUG00000030778	ENSSTUG00000030804
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000078974	sox1b (ENSSSAG00000028805)	arhgef7b (ENSSSAG00000045555)	ENSSSAG00000053976	LIPB (ENSSSAG00000053997)	ENSSSAG00000113836	ENSSSAG00000083176	ENSSSAG00000054862	ENSSSAG00000054854	inpp4ab (ENSSSAG00000054024)	tm182 (ENSSSAG00000030984)	pou3f3b (ENSSSAG00000101862)	ENSSSAG00000077018	mrps9 (ENSSSAG00000077015)	ENSSSAG00000077004	ENSSSAG00000077000 #22	ENSSSAG00000054998 #35	ENSSSAG00000076998 #26	ENSSSAG00000076993	ENSSSAG00000096664	efna2a (ENSSSAG00000076992)	ptbp1 (ENSSSAG00000058273)	palm1b (ENSSSAG00000118074)	ENSSSAG00000069092	ENSSSAG00000107093	cldn11a (ENSSSAG00000092281)	slc7a14a (ENSSSAG00000058384)	slc2a2 (ENSSSAG00000060861)	tnika (ENSSSAG00000006960)	ENSSSAG00000087097	ENSSSAG00000082604
Salmo	ANCESTRAL SPECIES	72	ENSGT00940000157849.n.c.c	ENSGT00990000211402	ENSGT00940000162479.b.i.b.c.a	ENSGT00940000155360.B.k.c.a	ENSGT00940000163243.f	ENSGT00390000008846.a	ENSGT00940000159205.gb.a	ENSGT00940000163031.b.a.a.d	ENSGT00390000018553.e.b	ENSGT00940000164275.f.f	ENSGT00940000157360.c.i.a	ENSGT00390000017581.b.b.d.b	ENSGT00940000164385.a.a.a.b.f	ENSGT00390000011204.e	ENSGT00390000017860.a.b.f.e	ENSGT00390000013956.r #22	ENSGT00940000156877.g.b #26	ENSGT00940000160040.B.a.a.e.b	ENSGT01050000244924.a.a.b.a.b.e.a	ENSGT00990000206247	ENSGT00940000160280.d.c.a	ENSGT00940000161021.a.b.g	ENSGT00890000139496.a.h	ENSGT00940000155893.b.e
River trout	MODERN SPECIES	36	ATP11A (ENSSTUG00000018974)	sox1b (ENSSTUG00000018630)	arhgef7b (ENSSTUG00000015815)	ENSSTUG00000014720	lipt1 (ENSSTUG00000014646)	tsga10 (ENSSTUG00000014562)	ENSSTUG00000014543	ENSSTUG00000014518	unc50 (ENSSTUG00000014502)	ENSSTUG00000014497	inpp4ab (ENSSTUG00000013043)	ENSSTUG00000012937	pou3f3b (ENSSTUG00000012917)	mrps9 (ENSSTUG00000012891)	ENSSTUG00000012856	ENSSTUG00000012823 #22	ENSSTUG00000012814 #26	ENSSTUG00000012800 #35	efna2a (ENSSTUG00000012794)	ptbp1a (ENSSTUG00000012389)	ENSSTUG00000012334	ENSSTUG00000012330	GRIN3B (ENSSTUG00000012185)	cldn11a (ENSSTUG00000012162)	slc7a14a (ENSSTUG00000012153)	slc2a2 (ENSSTUG00000011869)	ENSSTUG00000011851	pak2a (ENSSTUG00000011713)	pls1 (ENSSTUG00000010105)	ATR (ENSSTUG00000010029)	ENSSTUG00000010016
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000112221	ENSSSAG00000028853	sox1b (ENSSSAG00000091784)	arhgef7b (ENSSSAG00000039606)	ENSSSAG00000039332	lipt1 (ENSSSAG00000039313)	ENSSSAG00000039034	ENSSSAG00000039005	ENSSSAG00000038673	inpp4ab (ENSSSAG00000031267)	ENSSSAG00000031058	pou3f3b (ENSSSAG00000083901)	mrps9 (ENSSSAG00000030622)	ENSSSAG00000054968	ENSSSAG00000054989 #26	ENSSSAG00000097082 #22	ENSSSAG00000086884	ptbp1a (ENSSSAG00000069127)	ENSSSAG00000058289	ENSSSAG00000115621	ENSSSAG00000069064	slc7a14a (ENSSSAG00000069049)	ENSSSAG00000101469	SLC2A2 (ENSSSAG00000006108)	tnika (ENSSSAG00000112433)	ENSSSAG00000075620	ENSSSAG00000060629	ENSSSAG00000064788	ENSSSAG00000064092	ENSSSAG00000055951	ENSSSAG00000098776
Northern pike	MODERN SPECIES	21	MCF2L (ENSELUG00000005447)	tubgcp3 (ENSELUG00000005567)	sox1b (ENSELUG00000005792)	ATP11A (ENSELUG00000005738)	arhgef7b (ENSELUG00000005907)	ENSELUG00000001132	lipt1 (ENSELUG00000005979)	tsga10 (ENSELUG00000006038)	ENSELUG00000006099	unc50 (ENSELUG00000033269)	inpp4ab (ENSELUG00000006294)	ENSELUG00000006350	pou3f3b (ENSELUG00000006369)	mrps9 (ENSELUG00000006431)	SLAIN1 (ENSELUG00000006486)	ENSELUG00000006526 #22	ENSELUG00000006544 #26	ENSELUG00000006561 #35	ENSELUG00000006570	efna2a (ENSELUG00000006580)	ptbp1a (ENSELUG00000006668)	palm1b (ENSELUG00000006693)	plppr3a (ENSELUG00000006711)	GRIN3B (ENSELUG00000006801)	cldn11a (ENSELUG00000001325)	slc7a14a (ENSELUG00000006859)	slc2a2 (ENSELUG00000006900)	tnika (ENSELUG00000006980)	gyg1a (ENSELUG00000007021)	pak2a (ENSELUG00000007078)	pls1 (ENSELUG00000007125)
Otomorpha	ANCESTRAL SPECIES	481															ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758
Otophysi	ANCESTRAL SPECIES	362															ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00940000175375	ENSGT00940000159144.A	ENSGT00390000003758
Characiphysae	ANCESTRAL SPECIES	220															ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00940000159144.B.y.a	ENSGT00390000003758
Characiphysae_b	ANCESTRAL SPECIES	50	ENSGT00950000182969.A.b	ENSGT00940000163961.b.j	ENSGT00940000161090.A	ENSGT01030000234555.b.f	ENSGT00940000153648.a	ENSGT00940000157440.m.b	ENSGT00940000162831	ENSGT00940000166518	ENSGT00940000154517.nb	ENSGT00940000154443.g	ENSGT00940000155375.p	ENSGT00940000155600.a.a	ENSGT01060000248589.C.g.b	ENSGT00940000159395.d	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00940000159144.B.y.a	ENSGT00390000003758	ENSGT00940000159196	ENSGT00940000153981.A	ENSGT00940000162795.c.b	ENSGT00940000153931.b.b	ENSGT00940000155232.t.b.a	ENSGT00940000166422	ENSGT00940000155232.t.a.b.b	ENSGT00940000156862	ENSGT00940000157829.m.a
Characoidei	ANCESTRAL SPECIES	44	ENSGT00390000016794.c.b	ENSGT00940000163961.b.j	ENSGT00940000161090.A	ENSGT01030000234555.b.f	ENSGT00940000153648.a	ENSGT00940000157440.m.b	ENSGT00940000162831	ENSGT00940000166518	ENSGT00940000154517.nb	ENSGT00940000154443.g	ENSGT00940000155375.p	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000159395.d	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00970000196952	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00940000159144.B.y.a	ENSGT00390000003758	ENSGT00940000159196	ENSGT00940000153981.A	ENSGT00940000153931.b.b	ENSGT00940000155232.t.b.a	ENSGT00940000166422	ENSGT00940000155232.t.a.b.b	ENSGT00940000156862	ENSGT00950000183071.a.a.a.e.b.g	ENSGT00390000010308
Mexicana tetra	MODERN SPECIES	4	ARPC2 (ENSAMXG00000013415)	ENSAMXG00000013414	ENSAMXG00000034258	ENSAMXG00000034203	aamp (ENSAMXG00000013407)	HDAC4 (ENSAMXG00000013400)	ENSAMXG00000025657	kdm6al (ENSAMXG00000013399)	FUNDC1 (ENSAMXG00000002485)	ddx3xb (ENSAMXG00000013396)	ENSAMXG00000013394	caskb (ENSAMXG00000013382)	GPR34 (ENSAMXG00000033447)	FBXL3 (ENSAMXG00000038418)	slain1b (ENSAMXG00000031965)	ENSAMXG00000013362 #22	MTRF1 (ENSAMXG00000031859) #26	ENSAMXG00000031789	ENSAMXG00000039133	ENSAMXG00000035682	ENSAMXG00000013337	TGDS (ENSAMXG00000013312)	GPR180 (ENSAMXG00000033211)	sox21a (ENSAMXG00000025656)	abcc4 (ENSAMXG00000013229)	cldn10a (ENSAMXG00000034562)	ENSAMXG00000040236	CLDN10 (ENSAMXG00000030427)	ENSAMXG00000013177	ENSAMXG00000013174	ENSAMXG00000013169
Red-bellied piranha	MODERN SPECIES	207				ENSPNAG00000009705	ARPC2 (ENSPNAG00000009717)	ENSPNAG00000010015	ENSPNAG00000010071	ENSPNAG00000010082	aamp (ENSPNAG00000010124)	ENSPNAG00000010355	ENSPNAG00000010419	kdm6al (ENSPNAG00000010594)	ENSPNAG00000010617	ENSPNAG00000010637	SLAIN1 (ENSPNAG00000010649)	ENSPNAG00000010658 #22	MTRF1 (ENSPNAG00000010682) #26	ENSPNAG00000010690 #35	ENSPNAG00000010696	TSC22D1 (ENSPNAG00000010743)	ENSPNAG00000010758	TGDS (ENSPNAG00000010773)	GPR180 (ENSPNAG00000010791)	sox21a (ENSPNAG00000010802)	abcc4 (ENSPNAG00000001466)	cldn10a (ENSPNAG00000010941)	ENSPNAG00000010951	CLDN10 (ENSPNAG00000010976)	dzip1 (ENSPNAG00000001495)	ENSPNAG00000001504	ENSPNAG00000011069
Electric eel	MODERN SPECIES	307								kdm6al (ENSEEEG00000019334)	FUNDC1 (ENSEEEG00000021064)	ddx3xb (ENSEEEG00000021111)	ENSEEEG00000021908	caskb (ENSEEEG00000021968)	GPR34 (ENSEEEG00000022436)	FBXL3 (ENSEEEG00000022438)	slain1b (ENSEEEG00000022440)	ENSEEEG00000022441 #22	ENSEEEG00000022442 #26	ENSEEEG00000022443 #35	ENSEEEG00000022444	ENSEEEG00000022445	ENSEEEG00000022446	ENSEEEG00000022448	TGDS (ENSEEEG00000022451)	GPR180 (ENSEEEG00000022456)	catip (ENSEEEG00000022457)	pnkd (ENSEEEG00000022459)	tmbim1a (ENSEEEG00000022460)	si:ch73-71c20.5 (ENSEEEG00000022461)	mcm6 (ENSEEEG00000022465)	cxcr4a (ENSEEEG00000022477)	ical1 (ENSEEEG00000022479)
Channel catfish	MODERN SPECIES	3	GPR180 (ENSIPUG00000010525)	TGDS (ENSIPUG00000010461)	SLC19A1 (ENSIPUG00000010418)	ENSIPUG00000010165	ddx3xb (ENSIPUG00000009936)	kdm6al (ENSIPUG00000005102)	prelid3b (ENSIPUG00000004788)	slc32a1 (ENSIPUG00000004778)	septin8a (ENSIPUG00000004772)	ENSIPUG00000004759	inha (ENSIPUG00000004751)	gjc4a.1 (ENSIPUG00000004675)	STK11IP (ENSIPUG00000004620)	igfbp2a (ENSIPUG00000004584)	IGFBP5 (ENSIPUG00000004559)	wbp4 (ENSIPUG00000004525) #22	ENSIPUG00000004507	ENSIPUG00000004500	Nufip1 (ENSIPUG00000004479)	ENSIPUG00000004466	ahcy-b (ENSIPUG00000004424)	nhej1 (ENSIPUG00000004365)	bin1b (ENSIPUG00000004347)	chmp4ba (ENSIPUG00000004312)	dtd1 (ENSIPUG00000004266)	ENSIPUG00000004248	ENSIPUG00000004232	mtss1 (ENSIPUG00000004200)	ENSIPUG00000004179	mych (ENSIPUG00000004172)	romo1 (ENSIPUG00000004166)
Cyprinoidei	ANCESTRAL SPECIES	436															ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22
Cyprininae	ANCESTRAL SPECIES	649									ENSGT00390000018016.n	ENSGT01050000244866.D.a	ENSGT00940000153981.A	ENSGT00940000159196	ENSGT00940000159144.A.h	ENSGT00980000201779	ENSGT00390000017860.a.b.f.j	ENSGT00390000013956 #22	ENSGT00940000159395.d	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518.t.a
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	445								ENSGT00390000003758	ENSGT00940000159144.A.g	ENSGT00940000175375	ENSGT01070000253816.a.a.b.d #35	ENSGT00940000156877 #26	ENSGT00390000017860.a.b.f.i	ENSGT00390000013956.t #22	ENSGT00390000017860.a.b.f.j	ENSGT00390000013956.s #22	ENSGT00940000159395.d	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518.t.a	ENSGT00940000157440.m.b	ENSGT00940000153648.a.c	ENSGT01030000234555.b.f	ENSGT00940000155375.p
Golden-line barbel	MODERN SPECIES	3209																ENSSGRG00000005148 #22	ENSSGRG00000005146
Common carp reference	MODERN SPECIES	10	ENSCCRG00000055406	ENSCCRG00000068291	ENSCCRG00000067141	ENSCCRG00000037790	slc32a1 (ENSCCRG00000065530)	aurka (ENSCCRG00000056698)	prelid3b (ENSCCRG00000074761)	pmepa1 (ENSCCRG00000060226)	ccndbp1 (ENSCCRG00000081482)	ENSCCRG00000036183	ENSCCRG00000036491	ENSCCRG00000076435	ENSCCRG00000042744	ENSCCRG00000070263	ENSCCRG00000063712	ENSCCRG00000047264 #22	ENSCCRG00000075242	caskb (ENSCCRG00000080829)	ddx3xb (ENSCCRG00000060626)	ENSCCRG00000082686	kdm6al (ENSCCRG00000047102)	ENSCCRG00000052702	aamp (ENSCCRG00000027191)	ENSCCRG00000027186
Cyprininae_a	ANCESTRAL SPECIES	445										ENSGT00390000003758	ENSGT00940000159144.A.g	ENSGT00940000175375	ENSGT01070000253816.a.a.b.d #35	ENSGT00940000156877 #26	ENSGT00390000017860.a.b.f.i	ENSGT00390000013956.t #22	ENSGT00390000017860.a.b.f.j	ENSGT00390000013956.s #22	ENSGT00940000159395.d	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518.t.a	ENSGT00940000157440.m.b	ENSGT00940000153648.a.c	ENSGT01030000234555.b.f	ENSGT00940000155375.p
Golden-line barbel	MODERN SPECIES	576			R3HDM2 (ENSSGRG00000028319)	NXPH4 (ENSSGRG00000028322)	shmt2 (ENSSGRG00000028323)	fam210b (ENSSGRG00000028324)	ENSSGRG00000028326	ARHGAP40 (ENSSGRG00000028327)	aurka (ENSSGRG00000028328)	prelid3b (ENSSGRG00000028329)	PMEPA1 (ENSSGRG00000028330)	nufip1 (ENSSGRG00000028331)	ENSSGRG00000028332	MTRF1 (ENSSGRG00000028333) #26	slain1b (ENSSGRG00000028334)	ENSSGRG00000028335 #22	FBXL3 (ENSSGRG00000028340)	caskb (ENSSGRG00000028399)	GPR34 (ENSSGRG00000031165)	ddx3xb (ENSSGRG00000031713)	kdm6al (ENSSGRG00000031942)	ENSSGRG00000032214	ENSSGRG00000032216
Goldfish	MODERN SPECIES	46	ENSCARG00000005002	shmt2 (ENSCARG00000005038)	fam210b (ENSCARG00000005368)	ENSCARG00000005377	ARHGAP40 (ENSCARG00000005406)	slc32a1 (ENSCARG00000005422)	aurka (ENSCARG00000005426)	prelid3b (ENSCARG00000005442)	pmepa1 (ENSCARG00000005475)	ENSCARG00000005504	GPR180 (ENSCARG00000005851)	ENSCARG00000005875	TGDS (ENSCARG00000005880)	ENSCARG00000005890	ENSCARG00000005900	ENSCARG00000005937 #22	ENSCARG00000005985	caskb (ENSCARG00000006361)	GPR34 (ENSCARG00000012346)	ddx3xb (ENSCARG00000012380)	FUNDC1 (ENSCARG00000013359)	kdm6al (ENSCARG00000013650)	ENSCARG00000024886	ENSCARG00000024892	ENSCARG00000024930	aamp (ENSCARG00000025535)	gli1 (ENSCARG00000026038)	ENSCARG00000026078	ARHGAP9 (ENSCARG00000026101)	mars1 (ENSCARG00000026211)	ddit3 (ENSCARG00000027574)
Clupeiformes	ANCESTRAL SPECIES	462														ENSGT00530000063872.B	ENSGT00390000017860.a.b.f	ENSGT00390000013956 #22	ENSGT00940000156877 #26	ENSGT00390000005130	ENSGT00940000163647.d	ENSGT00390000003758	ENSGT00990000204351	ENSGT00940000155749.d
Denticle herring	MODERN SPECIES	15	pir (ENSDCDG00000016337)	vegfd (ENSDCDG00000016335)	GRPR (ENSDCDG00000016332)	xk (ENSDCDG00000016330)	cybb (ENSDCDG00000015798)	DYNLT3 (ENSDCDG00000015762)	rpgrb (ENSDCDG00000015702)	tspan7b (ENSDCDG00000015693)	MID1IP1 (ENSDCDG00000015688)	bcor (ENSDCDG00000015685)	atp6ap2 (ENSDCDG00000015649)	ENSDCDG00000015632	FBXL3 (ENSDCDG00000015627)	ENSDCDG00000015618	SLAIN1 (ENSDCDG00000015608)	ENSDCDG00000015600 #22	ENSDCDG00000015591 #26	ENSDCDG00000015585 #35	ENSDCDG00000015580	ENSDCDG00000015575	ENSDCDG00000015565	ENSDCDG00000015559	ATP7B (ENSDCDG00000014839)	HTR2A (ENSDCDG00000014780)	sucla2 (ENSDCDG00000014586)	nudt15 (ENSDCDG00000014563)	itm2ba (ENSDCDG00000014548)	abi2b (ENSDCDG00000014471)	slx9 (ENSDCDG00000014442)	ADARB1 (ENSDCDG00000014143)	mrap2a (ENSDCDG00000014089)
Osteoglossiformes	ANCESTRAL SPECIES	281	ENSGT00940000157563.c	ENSGT01030000234518.C.a.b.a.b.b	ENSGT01100000263536.C.b	ENSGT00390000001134.a.a	ENSGT00530000063106.C	ENSGT00940000156711.m.a	ENSGT00940000158108.x	ENSGT00940000158486.f	ENSGT00940000154925	ENSGT00950000183159.b.c.b	ENSGT00940000161074.a.g	ENSGT00390000010065	ENSGT00940000159395	ENSGT00940000155756.l	ENSGT00390000017860.a.b.g	ENSGT00390000013956 #22	ENSGT00940000156877 #26
Asian bonytongue	MODERN SPECIES	5	tm9sf2 (ENSSFOG00015022157)	ENSSFOG00015006994	GPR18 (ENSSFOG00015006987)	dachd (ENSSFOG00015031129)	DIS3 (ENSSFOG00015006865)	KLF5 (ENSSFOG00015006834)	KLF12 (ENSSFOG00015006798)	TBC1D4 (ENSSFOG00015006703)	uchl3 (ENSSFOG00015006539)	ENSSFOG00015006512	KCTD12 (ENSSFOG00015022546)	CLN5 (ENSSFOG00015006476)	fbxl3a (ENSSFOG00015030674)	mycbp2 (ENSSFOG00015006249)	SLAIN1 (ENSSFOG00015006219)	WBP4 (ENSSFOG00015025559) #22	ENSSFOG00015031600 #26	zgc:101559 (ENSSFOG00015027414)	rgcc (ENSSFOG00015024777) #31	DGKH (ENSSFOG00015005940) #33	ENSSFOG00015031617 #35	EPSTI1 (ENSSFOG00015005909) #37	dnajc15 (ENSSFOG00015026269)	ENOX1 (ENSSFOG00015005859)	LACC1 (ENSSFOG00015005849)	ENSSFOG00015005822	kctd4 (ENSSFOG00015005788)	gtf2f2b (ENSSFOG00015005749)	tpt1 (ENSSFOG00015005664)	CHMP2B (ENSSFOG00015024968)	ENSSFOG00015005631
P. kingsleyae	MODERN SPECIES	245	zic2a (ENSPKIG00000014203)	ENSPKIG00000014175	tm9sf2 (ENSPKIG00000014087)	gpr183b (ENSPKIG00000014047)	GPR18 (ENSPKIG00000014029)	dachd (ENSPKIG00000013979)	DIS3 (ENSPKIG00000013775)	KLF5 (ENSPKIG00000013712)	ENSPKIG00000013699	TBC1D4 (ENSPKIG00000013674)	uchl3 (ENSPKIG00000013632)	ENSPKIG00000013538	KCTD12 (ENSPKIG00000013495)	CLN5 (ENSPKIG00000013477)	ENSPKIG00000013434	ENSPKIG00000013409 #22	zgc:101559 (ENSPKIG00000013397)	ENSPKIG00000013382 #35	dnajc15 (ENSPKIG00000013361)	LACC1 (ENSPKIG00000013329)	tsc22d1 (ENSPKIG00000013295)	kctd4 (ENSPKIG00000013281)	gtf2f2b (ENSPKIG00000013231)	chmp2ba (ENSPKIG00000013204)	etnppl (ENSPKIG00000013142)	ENSPKIG00000013106	coq10b (ENSPKIG00000013081)	rftn2 (ENSPKIG00000013039)	PLCL1 (ENSPKIG00000013002)	ENSPKIG00000012966	KLF7 (ENSPKIG00000012937)
Spotted gar	MODERN SPECIES	655	MX1 (ENSLOCG00000006363)	gatd3 (ENSLOCG00000006346)	stxbp5l (ENSLOCG00000006301)	gtf2e1 (ENSLOCG00000006285)	rabl3 (ENSLOCG00000006265)	gzm3.4 (ENSLOCG00000006230)	ercc1 (ENSLOCG00000006213)	kctd12.1 (ENSLOCG00000017786)	acod1 (ENSLOCG00000006179)	zgc:162944 (ENSLOCG00000006169)	CLN5 (ENSLOCG00000006151)	fbxl3a (ENSLOCG00000006132)	mycbp2 (ENSLOCG00000006053)	ENSLOCG00000006032	slain1a (ENSLOCG00000006004)	WBP4 (ENSLOCG00000005967) #22	ENSLOCG00000005953	MTRF1 (ENSLOCG00000005937) #26	NAA16 (ENSLOCG00000005914) #29	zgc:101559 (ENSLOCG00000005904)	rgcc (ENSLOCG00000005886) #31	vwa8 (ENSLOCG00000005831) #32	DGKH (ENSLOCG00000005796) #33	AKAP11 (ENSLOCG00000005768) #34	ENSLOCG00000005745 #35	EPSTI1 (ENSLOCG00000005706) #37	dnajc15 (ENSLOCG00000005690)	ENOX1 (ENSLOCG00000005664)	ENSLOCG00000005651	LACC1 (ENSLOCG00000005637)	serp2 (ENSLOCG00000005623)
Reedfish	MODERN SPECIES	12	ENSECRG00000018957	pcdh17 (ENSECRG00000018980)	anxa4 (ENSECRG00000018993)	ENSECRG00000019016	pcdh8 (ENSECRG00000019040)	OLFM4 (ENSECRG00000019057)	OLFM4 (ENSECRG00000019082)	OLFM4 (ENSECRG00000019120)	OLFM4 (ENSECRG00000019145)	OLFM4 (ENSECRG00000019188)	PCDH8 (ENSECRG00000019234)	CNMD (ENSECRG00000019260)	sugt1 (ENSECRG00000019304)	flr (ENSECRG00000019520)	ELF1 (ENSECRG00000019865) #21	WBP4 (ENSECRG00000019911) #22	ENSECRG00000019954	ENSECRG00000019989	MTRF1 (ENSECRG00000020293) #26	NAA16 (ENSECRG00000020321) #29	rgcc (ENSECRG00000020346) #31	vwa8 (ENSECRG00000020374) #32	DGKH (ENSECRG00000020480) #33	AKAP11 (ENSECRG00000020561) #34	TNFSF11 (ENSECRG00000020576) #35	ENOX1 (ENSECRG00000005406)	ENSECRG00000005449	LACC1 (ENSECRG00000005470)	ENSECRG00000005484	ENSECRG00000005495	ENSECRG00000005504
Elephant shark	MODERN SPECIES	1666															sat1a.2 (ENSCMIG00000005943)	WBP4 (ENSCMIG00000005947) #22	ENSCMIG00000005949	ENSCMIG00000005950	MTRF1 (ENSCMIG00000005951) #26	rgcc (ENSCMIG00000005954) #31	vwa8 (ENSCMIG00000005995) #32	DGKH (ENSCMIG00000006217) #33	AKAP11 (ENSCMIG00000006334) #34	ENSCMIG00000006340 #37	DNAJC15 (ENSCMIG00000006344)	ENOX1 (ENSCMIG00000006352)	wdfy2 (ENSCMIG00000006385)	ENSCMIG00000006436	serpine3 (ENSCMIG00000006536)	FAM124A (ENSCMIG00000006538)	ENSCMIG00000006554
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Hagfish	MODERN SPECIES	30														ENSEBUG00000010704	mtmr2 (ENSEBUG00000002250)	ENSEBUG00000005193 #22	ENSEBUG00000006023	ndfip1 (ENSEBUG00000013365)
Ciona	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Ciona intestinalis	MODERN SPECIES	1	ENSCING00000022745	ENSCING00000007838	ENSCING00000013903	ENSCING00000023166	ENSCING00000007848	ENSCING00000018827	ENSCING00000022089	ENSCING00000007843	ENSCING00000019952	ENSCING00000013904	ENSCING00000007849	ENSCING00000022824	ENSCING00000007850	ENSCING00000019890	ENSCING00000023026	ENSCING00000006376 #22	ENSCING00000018831	ENSCING00000019683	ENSCING00000013909	ENSCING00000013908	ENSCING00000014828	ENSCING00000014829	ENSCING00000023081	ENSCING00000006525	ENSCING00000019588
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00390000013956 #22
Fruitfly	MODERN SPECIES	16	S (FBgn0003310)	CG4415 (FBgn0031296)	CG4375 (FBgn0031295)	IA-2 (FBgn0031294)	CG4341 (FBgn0028481)	GluRIIC (FBgn0046113)	Lsp1beta (FBgn0002563)	ninaA (FBgn0002936)	CG15824 (FBgn0031292)	PNUTS (FBgn0053526)	dbe (FBgn0020305)	aru (FBgn0029095)	CG13950 (FBgn0031289)	CG13949 (FBgn0031288)	kraken (FBgn0020545)	CG4291 (FBgn0031287) #22	drongo (FBgn0020304)	dock (FBgn0010583)	CG3862 (FBgn0031286)	CG3662 (FBgn0031285)	Clp (FBgn0015621)	PGAP2 (FBgn0031284)	CG15880 (FBgn0031283)	Pex12 (FBgn0031282)	Saf6 (FBgn0031281)	Dbp21E2 (FBgn0086130)	Nnf1b (FBgn0051658)	Pkg21D (FBgn0000442)	CG3544 (FBgn0031279)	Gr21a (FBgn0041250)	CG13947 (FBgn0031277)