Rodentia	ANCESTRAL SPECIES	12	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00440000033985	ENSGT00390000011072 #22	ENSGT00390000011179 #24	ENSGT00940000154390.A.j #25	ENSGT00940000160915 #26	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164	ENSGT00940000158973.b	ENSGT00940000158444	ENSGT00860000135606	ENSGT00940000159904
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00440000033985	ENSGT00390000011072 #22	ENSGT00390000011179 #24	ENSGT00940000154390.A.j #25	ENSGT00940000160915 #26	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164	ENSGT00940000158973.b	ENSGT00940000158444	ENSGT00860000135606	ENSGT00940000159904
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00440000033985	ENSGT00390000011072 #22	ENSGT00390000011179 #24	ENSGT00940000154390.A.j #25	ENSGT00940000160915 #26	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164	ENSGT00940000158973.b	ENSGT00940000158444	ENSGT00860000135606	ENSGT00940000159904
Marmotini	ANCESTRAL SPECIES	37	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00960000189879 #21	ENSGT00390000011072 #22	ENSGT00940000153505.a.a.c.a #23	ENSGT00390000011179 #24	ENSGT00940000154390.A.j #25	ENSGT00940000160915 #26	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164	ENSGT00940000158973.b	ENSGT00940000158444	ENSGT00860000135606
Marmotini_b	ANCESTRAL SPECIES	26	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00960000189879 #21	ENSGT00390000011072 #22	ENSGT00940000153505.a.a.c.a #23	ENSGT00390000011179 #24	ENSGT00940000154390.A.j #25	ENSGT00940000160915 #26	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164	ENSGT00940000158973.b	ENSGT00940000158444	ENSGT00860000135606
Arctic ground squirrel	MODERN SPECIES	466										C7orf25 (ENSUPAG00010015664) #16	PSMA2 (ENSUPAG00010015674) #17	MRPL32 (ENSUPAG00010015682) #18	HECW1 (ENSUPAG00010015687) #19	STK17A (ENSUPAG00010015724) #20	ENSUPAG00010015742 #21	BLVRA (ENSUPAG00010015766) #22	ENSUPAG00010015783 #23	MRPS24 (ENSUPAG00010015821) #24	URGCP (ENSUPAG00010015835) #25	UBE2D4 (ENSUPAG00010015863) #26	SLC5A1 (ENSUPAG00010015892) #27
Squirrel	MODERN SPECIES	78	AMPH (ENSSTOG00000012263)	VPS41 (ENSSTOG00000007343)	ENSSTOG00000023336	YAE1 (ENSSTOG00000023547)	RALA (ENSSTOG00000020292)	CDK13 (ENSSTOG00000022568)	MPLKIP (ENSSTOG00000026468)	SUGCT (ENSSTOG00000011998)	ENSSTOG00000034121	GLI3 (ENSSTOG00000020844)	C7orf25 (ENSSTOG00000027844) #16	PSMA2 (ENSSTOG00000013334) ##17	MRPL32 (ENSSTOG00000013340) #18	HECW1 (ENSSTOG00000016043) #19	STK17A (ENSSTOG00000026139) #20	BLVRA (ENSSTOG00000021499) #22	MRPS24 (ENSSTOG00000032907) #24	URGCP (ENSSTOG00000010637) #25	UBE2D4 (ENSSTOG00000002630) #26	DBNL (ENSSTOG00000002644)	PGAM2 (ENSSTOG00000008573)	POLM (ENSSTOG00000002662)	AEBP1 (ENSSTOG00000002677)	POLD2 (ENSSTOG00000002713)	MYL7 (ENSSTOG00000002725)	GCK (ENSSTOG00000002740)	YKT6 (ENSSTOG00000000448)	CAMK2B (ENSSTOG00000000450)	NUDCD3 (ENSSTOG00000000456)	ENSSTOG00000031145	NPC1L1 (ENSSTOG00000020879)
Alpin marmot	MODERN SPECIES	26	MPLKIP (ENSMMMG00000012038)	SUGCT (ENSMMMG00000012046)	INHBA (ENSMMMG00000012059)	GLI3 (ENSMMMG00000012080)	ENSMMMG00000012105	ENSMMMG00000012111	ENSMMMG00000012115	C7orf25 (ENSMMMG00000012127) #16	PSMA2 (ENSMMMG00000012134) ##17	MRPL32 (ENSMMMG00000012145) #18	ENSMMMG00000012152	HECW1 (ENSMMMG00000012160) #19	ENSMMMG00000012200	STK17A (ENSMMMG00000012208) #20	ENSMMMG00000012217 #21	BLVRA (ENSMMMG00000012252) #22	ENSMMMG00000012270 #23	MRPS24 (ENSMMMG00000012279) #24	URGCP (ENSMMMG00000012282) #25	ENSMMMG00000012291 #26	DBNL (ENSMMMG00000012313)	PGAM2 (ENSMMMG00000012371)	POLM (ENSMMMG00000012375)	ENSMMMG00000012394	POLD2 (ENSMMMG00000012436)	MYL7 (ENSMMMG00000012448)	GCK (ENSMMMG00000012459)	YKT6 (ENSMMMG00000012487)	CAMK2B (ENSMMMG00000012507)	NUDCD3 (ENSMMMG00000014107)	NPC1L1 (ENSMMMG00000014118)
Eurasian red squirrel	MODERN SPECIES	17	RALA (ENSSVLG00005004779)	ENSSVLG00005004818	MPLKIP (ENSSVLG00005004837)	SUGCT (ENSSVLG00005004898)	ENSSVLG00005005063	ENSSVLG00005005081	INHBA (ENSSVLG00005005151)	GLI3 (ENSSVLG00005005178)	C7orf25 (ENSSVLG00005005209) #16	PSMA2 (ENSSVLG00005005237) ##17	MRPL32 (ENSSVLG00005005303) #18	ENSSVLG00005005320	HECW1 (ENSSVLG00005005468) #19	STK17A (ENSSVLG00005005990) #20	COA1 (ENSSVLG00005006028)	BLVRA (ENSSVLG00005006049) #22	ENSSVLG00005006086	MRPS24 (ENSSVLG00005006180) #24	URGCP (ENSSVLG00005006226) #25	ENSSVLG00005006336	UBE2D4 (ENSSVLG00005006358) #26	DBNL (ENSSVLG00005006493)	PGAM2 (ENSSVLG00005006699)	POLM (ENSSVLG00005006728)	AEBP1 (ENSSVLG00005006770)	POLD2 (ENSSVLG00005006846)	MYL7 (ENSSVLG00005006900)	GCK (ENSSVLG00005006971)	ENSSVLG00005007143	CAMK2B (ENSSVLG00005007607)	NUDCD3 (ENSSVLG00005008781)
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00440000033985	ENSGT00390000011072 #22
Naked mole-rat female	MODERN SPECIES	30	NTAN1 (ENSHGLG00000050128)	ENSHGLG00000008152	ENSHGLG00000036454	ENSHGLG00000006862	CLEC16A (ENSHGLG00000017875)	DEXI (ENSHGLG00000017790)	CIITA (ENSHGLG00000013484)	TVP23A (ENSHGLG00000017585)	ENSHGLG00000010680	ENSHGLG00000009246	ENSHGLG00000041934 #16	ENSHGLG00000032238 ##17	MRPL32 (ENSHGLG00000017398) #18	HECW1 (ENSHGLG00000015248) #19	ENSHGLG00000019148 #20	BLVRA (ENSHGLG00000011265) #22	ENSHGLG00000008905	ENSHGLG00000042581	ENSHGLG00000020753	ENSHGLG00000020559	ENSHGLG00000034789	ENSHGLG00000039088	ENSHGLG00000020225	ENSHGLG00000012824	ENSHGLG00000016331	ENSHGLG00000037044	ENSHGLG00000016542	ENSHGLG00000048104	FAM151B (ENSHGLG00000009614)	ENSHGLG00000050164	ENSHGLG00000047767
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00440000033985	ENSGT00390000011072 #22
Guinea pig	MODERN SPECIES	30	ENSCPOG00000012221	ENSCPOG00000036410	YAE1 (ENSCPOG00000039885)	RALA (ENSCPOG00000037731)	ENSCPOG00000009938	MPLKIP (ENSCPOG00000037370)	SUGCT (ENSCPOG00000009948)	ENSCPOG00000037187	GLI3 (ENSCPOG00000013233)	C7orf25 (ENSCPOG00000013131) #16	PSMA2 (ENSCPOG00000013134) ##17	MRPL32 (ENSCPOG00000034853) #18	HECW1 (ENSCPOG00000000176) #19	STK17A (ENSCPOG00000012689) #20	ENSCPOG00000037130	BLVRA (ENSCPOG00000008136) #22	ENSCPOG00000023116	ENSCPOG00000023341	BBS9 (ENSCPOG00000000935)	ENSCPOG00000021798	NT5C3A (ENSCPOG00000013661)	FKBP9 (ENSCPOG00000019418)	RP9 (ENSCPOG00000040703)	KBTBD2 (ENSCPOG00000035648)	AVL9 (ENSCPOG00000001778)	LSM5 (ENSCPOG00000036386)	ENSCPOG00000036804	ENSCPOG00000020093	NPSR1 (ENSCPOG00000005695)	DPY19L1 (ENSCPOG00000012477)	ENSCPOG00000002208
Hystricomorpha_b	ANCESTRAL SPECIES	55	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00390000011072 #22
Long-tailed chinchilla	MODERN SPECIES	167	ENSCLAG00000006744	ENSCLAG00000006621	YAE1 (ENSCLAG00000006572)	RALA (ENSCLAG00000006479)	ENSCLAG00000011577	MPLKIP (ENSCLAG00000011526)	ENSCLAG00000008555	SUGCT (ENSCLAG00000007866)	INHBA (ENSCLAG00000007192)	GLI3 (ENSCLAG00000006524)	C7orf25 (ENSCLAG00000006458) #16	PSMA2 (ENSCLAG00000006277) ##17	MRPL32 (ENSCLAG00000016308) #18	HECW1 (ENSCLAG00000011773) #19	STK17A (ENSCLAG00000010347) #20	BLVRA (ENSCLAG00000008524) #22
Degu	MODERN SPECIES	72	ENSODEG00000009633	ENSODEG00000007666	POU6F2 (ENSODEG00000009460)	YAE1 (ENSODEG00000007300)	RALA (ENSODEG00000007864)	ENSODEG00000008309	ENSODEG00000008104	SUGCT (ENSODEG00000008687)	INHBA (ENSODEG00000007905)	GLI3 (ENSODEG00000008109)	C7orf25 (ENSODEG00000019542) #16	ENSODEG00000008580 ##17	MRPL32 (ENSODEG00000008658) #18	HECW1 (ENSODEG00000009462) #19	STK17A (ENSODEG00000007337) #20	BLVRA (ENSODEG00000007949) #22	RP9 (ENSODEG00000009275)	NT5C3A (ENSODEG00000011094)	FKBP9 (ENSODEG00000008022)	ENSODEG00000007433	ENSODEG00000007193	ENSODEG00000008901	ENSODEG00000019886	AVL9 (ENSODEG00000007683)	ENSODEG00000008258	ENSODEG00000007793
Rodentia_B	ANCESTRAL SPECIES	40	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00390000011072 #22	ENSGT00390000015821	ENSGT00530000063186.b.a	ENSGT00940000155450	ENSGT00390000001319	ENSGT00940000160556	ENSGT00530000063608.A	ENSGT00940000155909	ENSGT00940000156004	ENSGT00940000161552	ENSGT00940000156782.c	ENSGT00940000162844	ENSGT00520000055647.a	ENSGT00720000108792.A	ENSGT00940000161703	ENSGT00940000157781
Myomorpha	ANCESTRAL SPECIES	50	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722 #16	ENSGT00550000074870.b ##17	ENSGT00390000014996 #18	ENSGT00940000158294 #19	ENSGT00940000154014.a #20	ENSGT00390000011072 #22	ENSGT00390000015821	ENSGT00530000063186.b.a	ENSGT00940000155450	ENSGT00390000001319	ENSGT00940000160556	ENSGT00530000063608.A	ENSGT00940000155909	ENSGT00940000156004	ENSGT00940000161552	ENSGT00940000156782.c	ENSGT00940000162844	ENSGT00520000055647.a	ENSGT00720000108792.A	ENSGT00940000161703	ENSGT00940000157781
Muroidea	ANCESTRAL SPECIES	2	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000154488.A.b.a.a	ENSGT00940000160826
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000154488.A.b.a.a	ENSGT00940000160826
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000154488.A.b.a.a	ENSGT00940000160826
Northern American deer mouse	MODERN SPECIES	17	Galk2 (ENSPEMG00000006831)	Fam227b (ENSPEMG00000028378)	Fgf7 (ENSPEMG00000029951)	Dtwd1 (ENSPEMG00000024581)	Atp8b4 (ENSPEMG00000020855)	Slc27a2 (ENSPEMG00000021667)	Hdc (ENSPEMG00000002047)	Gabpb1 (ENSPEMG00000020310)	Usp8 (ENSPEMG00000023169)	Usp50 (ENSPEMG00000020756)	Trpm7 (ENSPEMG00000013989)	ENSPEMG00000030019	ENSPEMG00000026620	Sppl2a (ENSPEMG00000022191)	Ap4e1 (ENSPEMG00000021276)	Blvra (ENSPEMG00000009849) #22	Ncaph (ENSPEMG00000020773)	ENSPEMG00000020700	Ciao1 (ENSPEMG00000015800)	Tmem127 (ENSPEMG00000025168)	Stard7 (ENSPEMG00000028648)	Dusp2 (ENSPEMG00000026801)	Astl (ENSPEMG00000021150)	Adra2b (ENSPEMG00000007923)	Gpat2 (ENSPEMG00000008852)	Fahd2a (ENSPEMG00000000091)	Kcnip3 (ENSPEMG00000021898)	Prom2 (ENSPEMG00000000045)	ENSPEMG00000027287	Zfp661 (ENSPEMG00000010394)	Mrps5 (ENSPEMG00000012667)
Prairie vole	MODERN SPECIES	81	Secisbp2l (ENSMOCG00000014560)	Cops2 (ENSMOCG00000009875)	Galk2 (ENSMOCG00000022778)	Fam227b (ENSMOCG00000002372)	Fgf7 (ENSMOCG00000006067)	Dtwd1 (ENSMOCG00000013946)	Atp8b4 (ENSMOCG00000016392)	Slc27a2 (ENSMOCG00000015520)	Hdc (ENSMOCG00000000576)	Gabpb1 (ENSMOCG00000006290)	Usp8 (ENSMOCG00000011555)	Usp50 (ENSMOCG00000012932)	Trpm7 (ENSMOCG00000012810)	Sppl2a (ENSMOCG00000003985)	ENSMOCG00000019484	Blvra (ENSMOCG00000012856) #22	Ncaph (ENSMOCG00000002025)	Itpripl1 (ENSMOCG00000009786)	Snrnp200 (ENSMOCG00000011814)	Ciao1 (ENSMOCG00000009518)	Tmem127 (ENSMOCG00000000251)	Stard7 (ENSMOCG00000012311)	Dusp2 (ENSMOCG00000016146)	Astl (ENSMOCG00000012397)	Adra2b (ENSMOCG00000002034)	Gpat2 (ENSMOCG00000015683)	Fahd2a (ENSMOCG00000016891)	Kcnip3 (ENSMOCG00000013430)	Prom2 (ENSMOCG00000022376)	Zfp661 (ENSMOCG00000004580)	Mrps5 (ENSMOCG00000001710)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Chinese hamster chok1gshd	MODERN SPECIES	188	Galk2 (ENSCGRG00001023593)	ENSCGRG00001022441	Fgf7 (ENSCGRG00001021672)	Dtwd1 (ENSCGRG00001011621)	Atp8b4 (ENSCGRG00001023798)	Slc27a2 (ENSCGRG00001021565)	Hdc (ENSCGRG00001023140)	Gabpb1 (ENSCGRG00001022883)	Usp8 (ENSCGRG00001023611)	Usp50 (ENSCGRG00001024172)	ENSCGRG00001020900	Trpm7 (ENSCGRG00001022305)	Sppl2a (ENSCGRG00001004702)	ENSCGRG00001021438	Ap4e1 (ENSCGRG00001023130)	Blvra (ENSCGRG00001002848) #22	Ncaph (ENSCGRG00001018072)	ENSCGRG00001014240	Snrnp200 (ENSCGRG00001022610)	CIAO1 (ENSCGRG00001016622)	Tmem127 (ENSCGRG00001013245)	Stard7 (ENSCGRG00001019429)	Dusp2 (ENSCGRG00001018898)	Astl (ENSCGRG00001018505)	Adra2b (ENSCGRG00001010589)	Gpat2 (ENSCGRG00001013246)	Fahd2a (ENSCGRG00001008625)	Kcnip3 (ENSCGRG00001013000)	Prom2 (ENSCGRG00001013194)	ENSCGRG00001023976	ENSCGRG00001022733
Golden Hamster	MODERN SPECIES	631	Secisbp2l (ENSMAUG00000012011)	Cops2 (ENSMAUG00000021767)	Galk2 (ENSMAUG00000005751)	Fgf7 (ENSMAUG00000013683)	Dtwd1 (ENSMAUG00000012537)	ENSMAUG00000016470	Atp8b4 (ENSMAUG00000016813)	Slc27a2 (ENSMAUG00000016759)	Hdc (ENSMAUG00000015890)	Gabpb1 (ENSMAUG00000015629)	Usp8 (ENSMAUG00000019997)	Usp50 (ENSMAUG00000019613)	Trpm7 (ENSMAUG00000019210)	Sppl2a (ENSMAUG00000017369)	ENSMAUG00000020694	Blvra (ENSMAUG00000007089) #22	ENSMAUG00000021041	Itpripl1 (ENSMAUG00000021535)	Snrnp200 (ENSMAUG00000011825)	Ciao1 (ENSMAUG00000021994)	Tmem127 (ENSMAUG00000000907)	Stard7 (ENSMAUG00000021334)	Dusp2 (ENSMAUG00000005547)	Astl (ENSMAUG00000010799)	Gpat2 (ENSMAUG00000008394)	Fahd2a (ENSMAUG00000008042)	Kcnip3 (ENSMAUG00000010104)	Prom2 (ENSMAUG00000020319)	Zfp661 (ENSMAUG00000017603)	Mrps5 (ENSMAUG00000002765)	Mal (ENSMAUG00000010033)
Murinae	ANCESTRAL SPECIES	1	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Mus	ANCESTRAL SPECIES	1	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Mus_A	ANCESTRAL SPECIES		ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Mus_B	ANCESTRAL SPECIES	1	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Mus_C	ANCESTRAL SPECIES		ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072 #22	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000161605	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00530000063586.a	ENSGT00940000160826	ENSGT00390000001878
Steppe mouse	MODERN SPECIES	3248							Atp8b4 (ENSMSIG00000020283)	Slc27a2 (ENSMSIG00000020212)	Hdc (ENSMSIG00000020168)	ENSMSIG00000020139	Usp8 (ENSMSIG00000020086)	Usp50 (ENSMSIG00000020056)	Trpm7 (ENSMSIG00000019840)	Sppl2a (ENSMSIG00000019798)	Ap4e1 (ENSMSIG00000019734)	Blvra (ENSMSIG00000019697) #22	Ncaph (ENSMSIG00000019647)	1810024B03Rik (ENSMSIG00000019616)	ENSMSIG00000019614	Snrnp200 (ENSMSIG00000019504)	Ciao1 (ENSMSIG00000019407)	Tmem127 (ENSMSIG00000019390)	Stard7 (ENSMSIG00000019361)	ENSMSIG00000019346	Astl (ENSMSIG00000019284)	Adra2b (ENSMSIG00000019270)	Gpat2 (ENSMSIG00000019188)	Fahd2a (ENSMSIG00000019166)	ENSMSIG00000019089	Prom2 (ENSMSIG00000018975)	Zfp661 (ENSMSIG00000018918)
spretus	MODERN SPECIES	11	Secisbp2l (MGP_SPRETEiJ_G0025151)	Cops2 (MGP_SPRETEiJ_G0025152)	Galk2 (MGP_SPRETEiJ_G0025153)	Fam227b (MGP_SPRETEiJ_G0025154)	Fgf7 (MGP_SPRETEiJ_G0025155)	Dtwd1 (MGP_SPRETEiJ_G0025156)	Atp8b4 (MGP_SPRETEiJ_G0025157)	Slc27a2 (MGP_SPRETEiJ_G0025158)	Hdc (MGP_SPRETEiJ_G0025159)	Gabpb1 (MGP_SPRETEiJ_G0025160)	Usp8 (MGP_SPRETEiJ_G0025161)	Usp50 (MGP_SPRETEiJ_G0025162)	Trpm7 (MGP_SPRETEiJ_G0025163)	Sppl2a (MGP_SPRETEiJ_G0025164)	Ap4e1 (MGP_SPRETEiJ_G0025165)	Blvra (MGP_SPRETEiJ_G0025166) #22	Ncaph (MGP_SPRETEiJ_G0025167)	Itpripl1 (MGP_SPRETEiJ_G0025168)	1810024B03Rik (MGP_SPRETEiJ_G0025169)	Snrnp200 (MGP_SPRETEiJ_G0025170)	Ciao1 (MGP_SPRETEiJ_G0025171)	Tmem127 (MGP_SPRETEiJ_G0025172)	Stard7 (MGP_SPRETEiJ_G0025173)	Dusp2 (MGP_SPRETEiJ_G0025174)	Astl (MGP_SPRETEiJ_G0025175)	Adra2b (MGP_SPRETEiJ_G0025176)	Gpat2 (MGP_SPRETEiJ_G0025177)	Fahd2a (MGP_SPRETEiJ_G0025178)	Kcnip3 (MGP_SPRETEiJ_G0025179)	Prom2 (MGP_SPRETEiJ_G0025180)	Zfp661 (MGP_SPRETEiJ_G0025181)
Mouse	MODERN SPECIES	11	Secisbp2l (ENSMUSG00000035093)	Cops2 (ENSMUSG00000027206)	Galk2 (ENSMUSG00000027207)	Fam227b (ENSMUSG00000027209)	Fgf7 (ENSMUSG00000027208)	Dtwd1 (ENSMUSG00000023330)	Atp8b4 (ENSMUSG00000060131)	Slc27a2 (ENSMUSG00000027359)	Hdc (ENSMUSG00000027360)	Gabpb1 (ENSMUSG00000027361)	Usp8 (ENSMUSG00000027363)	Usp50 (ENSMUSG00000027364)	Trpm7 (ENSMUSG00000027365)	Sppl2a (ENSMUSG00000027366)	Ap4e1 (ENSMUSG00000001998)	Blvra (ENSMUSG00000001999) #22	Ncaph (ENSMUSG00000034906)	Itpripl1 (ENSMUSG00000074825)	1810024B03Rik (ENSMUSG00000044145)	Snrnp200 (ENSMUSG00000003660)	Ciao1 (ENSMUSG00000003662)	Tmem127 (ENSMUSG00000034850)	Stard7 (ENSMUSG00000027367)	Dusp2 (ENSMUSG00000027368)	Astl (ENSMUSG00000050468)	Adra2b (ENSMUSG00000058620)	Gpat2 (ENSMUSG00000046338)	Fahd2a (ENSMUSG00000027371)	Kcnip3 (ENSMUSG00000079056)	Prom2 (ENSMUSG00000027376)	Zfp661 (ENSMUSG00000034800)
Ryukyu mouse	MODERN SPECIES	11	Secisbp2l (MGP_CAROLIEiJ_G0024231)	Cops2 (MGP_CAROLIEiJ_G0024232)	Galk2 (MGP_CAROLIEiJ_G0024233)	Fam227b (MGP_CAROLIEiJ_G0024234)	Fgf7 (MGP_CAROLIEiJ_G0024235)	Dtwd1 (MGP_CAROLIEiJ_G0024236)	Atp8b4 (MGP_CAROLIEiJ_G0024237)	Slc27a2 (MGP_CAROLIEiJ_G0024238)	Hdc (MGP_CAROLIEiJ_G0024239)	Gabpb1 (MGP_CAROLIEiJ_G0024240)	Usp8 (MGP_CAROLIEiJ_G0024241)	Usp50 (MGP_CAROLIEiJ_G0024242)	Trpm7 (MGP_CAROLIEiJ_G0024243)	Sppl2a (MGP_CAROLIEiJ_G0024244)	Ap4e1 (MGP_CAROLIEiJ_G0024245)	Blvra (MGP_CAROLIEiJ_G0024246) #22	Ncaph (MGP_CAROLIEiJ_G0024247)	Itpripl1 (MGP_CAROLIEiJ_G0024248)	MGP_CAROLIEiJ_G0024249	Snrnp200 (MGP_CAROLIEiJ_G0024250)	Ciao1 (MGP_CAROLIEiJ_G0024251)	Tmem127 (MGP_CAROLIEiJ_G0024252)	Stard7 (MGP_CAROLIEiJ_G0024253)	Dusp2 (MGP_CAROLIEiJ_G0024254)	Astl (MGP_CAROLIEiJ_G0024255)	Adra2b (MGP_CAROLIEiJ_G0024256)	Gpat2 (MGP_CAROLIEiJ_G0024257)	Fahd2a (MGP_CAROLIEiJ_G0024258)	Kcnip3 (MGP_CAROLIEiJ_G0024259)	Prom2 (MGP_CAROLIEiJ_G0024260)	Zfp661 (MGP_CAROLIEiJ_G0024261)
Shrew mouse	MODERN SPECIES	16	Secisbp2l (MGP_PahariEiJ_G0025677)	Cops2 (MGP_PahariEiJ_G0025678)	Galk2 (MGP_PahariEiJ_G0025679)	Fam227b (MGP_PahariEiJ_G0025680)	Fgf7 (MGP_PahariEiJ_G0025681)	Dtwd1 (MGP_PahariEiJ_G0025682)	MGP_PahariEiJ_G0025683	Slc27a2 (MGP_PahariEiJ_G0025684)	Hdc (MGP_PahariEiJ_G0025685)	Gabpb1 (MGP_PahariEiJ_G0025686)	Usp8 (MGP_PahariEiJ_G0025687)	Usp50 (MGP_PahariEiJ_G0025688)	Trpm7 (MGP_PahariEiJ_G0025689)	MGP_PahariEiJ_G0025690	Ap4e1 (MGP_PahariEiJ_G0025691)	Blvra (MGP_PahariEiJ_G0025692) #22	Ncaph (MGP_PahariEiJ_G0025693)	Itpripl1 (MGP_PahariEiJ_G0025694)	Snrnp200 (MGP_PahariEiJ_G0025695)	Ciao1 (MGP_PahariEiJ_G0025696)	MGP_PahariEiJ_G0025697	MGP_PahariEiJ_G0025698	Dusp2 (MGP_PahariEiJ_G0025699)	Astl (MGP_PahariEiJ_G0025700)	Adra2b (MGP_PahariEiJ_G0025701)	Gpat2 (MGP_PahariEiJ_G0025702)	Fahd2a (MGP_PahariEiJ_G0025703)	Kcnip3 (MGP_PahariEiJ_G0025704)	Prom2 (MGP_PahariEiJ_G0025705)	Zfp661 (MGP_PahariEiJ_G0025706)	MGP_PahariEiJ_G0025707
Rat	MODERN SPECIES	13	Cops2 (ENSRNOG00000008744)	Galk2 (ENSRNOG00000009289)	Fam227b (ENSRNOG00000037124)	Fgf7 (ENSRNOG00000009425)	Dtwd1 (ENSRNOG00000009593)	Atp8b4 (ENSRNOG00000031598)	Slc27a2 (ENSRNOG00000010128)	Hdc (ENSRNOG00000010262)	Gabpb1 (ENSRNOG00000010659)	Usp8 (ENSRNOG00000010729)	Usp50 (ENSRNOG00000011401)	Trpm7 (ENSRNOG00000057806)	ENSRNOG00000033429	Sppl2a (ENSRNOG00000011652)	Ap4e1 (ENSRNOG00000022938)	Blvra (ENSRNOG00000011778) #22	Ncaph (ENSRNOG00000012051)	Itpripl1 (ENSRNOG00000012151)	Snrnp200 (ENSRNOG00000012157)	Ciao1 (ENSRNOG00000012638)	Tmem127 (ENSRNOG00000071101)	Stard7 (ENSRNOG00000013479)	Dusp2 (ENSRNOG00000013862)	Astl (ENSRNOG00000022603)	Adra2b (ENSRNOG00000013887)	Gpat2 (ENSRNOG00000013906)	Fahd2a (ENSRNOG00000013974)	Kcnip3 (ENSRNOG00000014152)	Prom2 (ENSRNOG00000014710)	LOC100909998 (ENSRNOG00000062743)	LOC100909998 (ENSRNOG00000068677)
Upper Galilee mountains blind mole rat	MODERN SPECIES	767	Eid1 (ENSNGAG00000010287)	Secisbp2l (ENSNGAG00000019213)	Cops2 (ENSNGAG00000009536)	Galk2 (ENSNGAG00000019161)	Fgf7 (ENSNGAG00000017817)	Dtwd1 (ENSNGAG00000019003)	Atp8b4 (ENSNGAG00000020421)	Slc27a2 (ENSNGAG00000023178)	Hdc (ENSNGAG00000011189)	Gabpb1 (ENSNGAG00000017899)	Usp8 (ENSNGAG00000010641)	Trpm7 (ENSNGAG00000004836)	ENSNGAG00000020663	Sppl2a (ENSNGAG00000000975)	ENSNGAG00000022314	Blvra (ENSNGAG00000014028) #22	Hnrnpa0 (ENSNGAG00000008883)	Klhl3 (ENSNGAG00000021508)	Spock1 (ENSNGAG00000022891)	Trpc7 (ENSNGAG00000015892)	Smim32 (ENSNGAG00000008630)	Smad5 (ENSNGAG00000022513)	Tgfbi (ENSNGAG00000008714)
Lesser Egyptian jerboa	MODERN SPECIES	161	ENSJJAG00000000615	Elmo1 (ENSJJAG00000003658)	9530077C05Rik (ENSJJAG00000005276)	Rala (ENSJJAG00000006484)	ENSJJAG00000007969	ENSJJAG00000009580	Sugct (ENSJJAG00000010553)	ENSJJAG00000007354	Inhba (ENSJJAG00000007614)	Gli3 (ENSJJAG00000009019)	AW209491 (ENSJJAG00000010303) #16	ENSJJAG00000010341 ##17	Mrpl32 (ENSJJAG00000010906) #18	Hecw1 (ENSJJAG00000011435) #19	ENSJJAG00000012096 #20	Blvra (ENSJJAG00000012133) #22	Vopp1 (ENSJJAG00000012611)	Lancl2 (ENSJJAG00000012831)	Egfr (ENSJJAG00000014249)	Sec61g (ENSJJAG00000015922)	Vstm2a (ENSJJAG00000016705)