Hystricomorpha	ANCESTRAL SPECIES	34	ENSGT00390000003224.A	ENSGT00940000156286.pb #7	ENSGT00940000157660 #8	ENSGT00390000005529.a #9	ENSGT00940000156297.y #10	ENSGT00940000157205 #11	ENSGT00940000154280.lb #13	ENSGT00940000156550 #14	ENSGT00940000156624 #15	ENSGT00940000156780 #16	ENSGT00940000156669.b #17	ENSGT00940000158385 #18	ENSGT00530000063735.a #19	ENSGT00390000012411 #20	ENSGT00650000093320.a.b #21	ENSGT00940000158894 #22	ENSGT00940000158933 #24	ENSGT00940000155766.a #23	ENSGT00390000016119.m.a ##25	ENSGT00390000001763 #26	ENSGT00940000161145 #27	ENSGT00530000063260 #28	ENSGT00940000154839.C #29	ENSGT00940000158818 #30	ENSGT00940000155552 #31	ENSGT00940000155327 #32	ENSGT00390000011390 #33	ENSGT00940000157363 #34	ENSGT00940000153920.b #35	ENSGT00940000153920.a.b #36	ENSGT00940000161039 #37
Hystricomorpha_a	ANCESTRAL SPECIES	50	ENSGT00390000003224.A	ENSGT00940000156286.pb #7	ENSGT00940000157660 #8	ENSGT00390000005529.a #9	ENSGT00940000156297.y #10	ENSGT00940000157205 #11	ENSGT00940000154280.lb #13	ENSGT00940000156550 #14	ENSGT00940000156624 #15	ENSGT00940000156780 #16	ENSGT00940000156669.b #17	ENSGT00940000158385 #18	ENSGT00530000063735.a #19	ENSGT00390000012411 #20	ENSGT00650000093320.a.b #21	ENSGT00940000158894 #22	ENSGT00940000155766.a #23	ENSGT00940000158933 #24	ENSGT00390000016119.n #25	ENSGT00390000001763 #26	ENSGT00940000161145 #27	ENSGT00530000063260 #28	ENSGT00940000154839.C #29	ENSGT00940000158818 #30	ENSGT00940000155552 #31	ENSGT00940000155327 #32	ENSGT00390000011390 #33	ENSGT00940000157363 #34	ENSGT00940000153920.b #35	ENSGT00940000153920.a.b #36	ENSGT00940000161039 #37
Guinea pig	MODERN SPECIES		FLNB (ENSCPOG00000010528) #7	SLMAP (ENSCPOG00000027044) #8	DENND6A (ENSCPOG00000033336) #9	ENSCPOG00000010334 #10	PDE12 (ENSCPOG00000001620) #11	ENSCPOG00000032558 #12	ENSCPOG00000007782 #13	ASB14 (ENSCPOG00000007776) #14	APPL1 (ENSCPOG00000007758) #15	HESX1 (ENSCPOG00000012741) #16	IL17RD (ENSCPOG00000009589) #17	ARHGEF3 (ENSCPOG00000000839) #18	TASOR (ENSCPOG00000012764) #19	CCDC66 (ENSCPOG00000009499) #20	ERC2 (ENSCPOG00000012484) #21	WNT5A (ENSCPOG00000039469) #22	CACNA2D3 (ENSCPOG00000009222) #23	LRTM1 (ENSCPOG00000035248) #24	ENSCPOG00000033922 #25	ACTR8 (ENSCPOG00000007166) #26	IL17RB (ENSCPOG00000014945) #27	CHDH (ENSCPOG00000021927) #28	CACNA1D (ENSCPOG00000011277) #29	DCP1A (ENSCPOG00000000073) #30	TKT (ENSCPOG00000000072) #31	PRKCD (ENSCPOG00000011547) #32	RFT1 (ENSCPOG00000010793) #33	SFMBT1 (ENSCPOG00000008585) #34	STIMATE (ENSCPOG00000033900) #35	MUSTN1 (ENSCPOG00000040259) #36	ITIH4 (ENSCPOG00000000287) #37
Hystricomorpha_b	ANCESTRAL SPECIES	56	ENSGT00390000003224.A	ENSGT00940000156286.pb #7	ENSGT00940000157660 #8	ENSGT00390000005529.a #9	ENSGT00940000156297.y #10	ENSGT00940000157205 #11	ENSGT00940000154280.lb #13	ENSGT00940000156550 #14	ENSGT00940000156624 #15	ENSGT00940000156780 #16	ENSGT00940000156669.b #17	ENSGT00940000158385 #18	ENSGT00530000063735.a #19	ENSGT00390000012411 #20	ENSGT00650000093320.a.b #21	ENSGT00940000158894 #22	ENSGT00940000158933 #24	ENSGT00940000155766.a #23	ENSGT00390000016119.n #25	ENSGT00390000001763 #26	ENSGT00940000161145 #27	ENSGT00530000063260 #28	ENSGT00940000154839.C #29	ENSGT00940000158818 #30	ENSGT00940000155552 #31	ENSGT00940000155327 #32	ENSGT00390000011390 #33	ENSGT00940000157363 #34	ENSGT00940000153920.b #35	ENSGT00940000153920.a.b #36	ENSGT00940000161039 #37
Degu	MODERN SPECIES	84	ENSODEG00000009554 #13	ENSODEG00000019205	ENSODEG00000006288 #13	ASB14 (ENSODEG00000005874) #14	APPL1 (ENSODEG00000005753) #15	ENSODEG00000008648 #16	ENSODEG00000009148	ENSODEG00000007374	ARHGEF3 (ENSODEG00000007707) #18	ENSODEG00000007518	ENSODEG00000008069	TASOR (ENSODEG00000006527) #19	ENSODEG00000007286	CCDC66 (ENSODEG00000010465) #20	ERC2 (ENSODEG00000006199) #21	WNT5A (ENSODEG00000007271) #22	CACNA2D3 (ENSODEG00000006836) #23	LRTM1 (ENSODEG00000009416) #24	ENSODEG00000009603 ##25	ACTR8 (ENSODEG00000009432) #26	IL17RB (ENSODEG00000010614) #27	CHDH (ENSODEG00000007204) #28	CACNA1D (ENSODEG00000007697) #29	ENSODEG00000008427 #30	TKT (ENSODEG00000008500) #31	PRKCD (ENSODEG00000006694) #32	ENSODEG00000019479	RFT1 (ENSODEG00000006717) #33	SFMBT1 (ENSODEG00000008195) #34	STIMATE (ENSODEG00000007556) #35	MUSTN1 (ENSODEG00000007782) #36
Long-tailed chinchilla	MODERN SPECIES	137	ENSCLAG00000006196	DENND6A (ENSCLAG00000005592) #9	ENSCLAG00000005094 #10	PDE12 (ENSCLAG00000004864) #11	ENSCLAG00000004164 #13	ENSCLAG00000007058 #13	ASB14 (ENSCLAG00000013726) #14	APPL1 (ENSCLAG00000005192) #15	HESX1 (ENSCLAG00000004680) #16	IL17RD (ENSCLAG00000004131) #17	ARHGEF3 (ENSCLAG00000016606) #18	TASOR (ENSCLAG00000008980) #19	ENSCLAG00000008567	CCDC66 (ENSCLAG00000009077) #20	ERC2 (ENSCLAG00000005508) #21	WNT5A (ENSCLAG00000008178) #22	LRTM1 (ENSCLAG00000007983) #24	CACNA2D3 (ENSCLAG00000007411) #23	ENSCLAG00000010760	ENSCLAG00000009685 #25	ACTR8 (ENSCLAG00000009113) #26	IL17RB (ENSCLAG00000005747) #27	CHDH (ENSCLAG00000005068) #28	CACNA1D (ENSCLAG00000008239) #29	DCP1A (ENSCLAG00000006913) #30	TKT (ENSCLAG00000006447) #31	PRKCD (ENSCLAG00000004074) #32	RFT1 (ENSCLAG00000006553) #33	SFMBT1 (ENSCLAG00000006337) #34	STIMATE (ENSCLAG00000005968) #35	MUSTN1 (ENSCLAG00000005729) #36
Naked mole-rat female	MODERN SPECIES	28				ENSHGLG00000036669	ENSHGLG00000003745 #16	IL17RD (ENSHGLG00000003939) #17	ENSHGLG00000048468	ENSHGLG00000004559	ARHGEF3 (ENSHGLG00000004164) #18	TASOR (ENSHGLG00000006020) #19	CCDC66 (ENSHGLG00000002221) #20	ENSHGLG00000002622	ENSHGLG00000021148	ENSHGLG00000038552	ERC2 (ENSHGLG00000003759) #21	WNT5A (ENSHGLG00000007709) #22	LRTM1 (ENSHGLG00000037277) #24	CACNA2D3 (ENSHGLG00000010346) #23	SELK (ENSHGLG00000039969) ##25	ACTR8 (ENSHGLG00000002016) #26	IL17RB (ENSHGLG00000033538) #27	ENSHGLG00000036025 #28	CHDH (ENSHGLG00000040809) #28	CACNA1D (ENSHGLG00000002771) #29	DCP1A (ENSHGLG00000049267) #30	ENSHGLG00000048991	PRKCD (ENSHGLG00000005558) #32	RFT1 (ENSHGLG00000007981) #33	ENSHGLG00000041965	SFMBT1 (ENSHGLG00000009343) #34	STIMATE (ENSHGLG00000043251) #35