Glires ANCESTRAL SPECIES 14 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00390000005421 #20 ENSGT00940000153458.B #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.b ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00390000010116 ENSGT00940000162151 ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000045276 #7 ENSHGLG00000040220 #8 ENSHGLG00000003065 #9 ENSHGLG00000010663 #10 PJVK (ENSHGLG00000011003) #11 FKBP7 (ENSHGLG00000019268) #12 ENSHGLG00000018641 #13 TTN (ENSHGLG00000036835) #14 CCDC141 (ENSHGLG00000002888) #15 SESTD1 (ENSHGLG00000003644) #16 ENSHGLG00000020829 #17 ZNF385B (ENSHGLG00000004054) #18 ENSHGLG00000020480 #19 ENSHGLG00000034152 #20 CWC22 (ENSHGLG00000005692) #21 UBE2E3 (ENSHGLG00000038435) #22 ITGA4 (ENSHGLG00000002811) #23 ENSHGLG00000003007 #24 NEUROD1 (ENSHGLG00000003374) #25 ITPRID2 (ENSHGLG00000004022) #26 PPP1R1C (ENSHGLG00000035196) #27 ENSHGLG00000018601 #28 ENSHGLG00000045205 #29 ENSHGLG00000037482 #30 ENSHGLG00000050584 #31 ENSHGLG00000013230 #32 ENSHGLG00000012563 #33 NCKAP1 (ENSHGLG00000012280) #34 FRZB (ENSHGLG00000011729) #35 ENSHGLG00000009430 #36 ENSHGLG00000001353 #37 Naked mole-rat female MODERN SPECIES 5 ENSHGLG00000035349 SNX13 (ENSHGLG00000018267) PRPS1L1 (ENSHGLG00000021217) HDAC9 (ENSHGLG00000019023) ENSHGLG00000033404 FERD3L (ENSHGLG00000036051) POLR1F (ENSHGLG00000010976) TMEM196 (ENSHGLG00000035074) ENSHGLG00000040956 MACC1 (ENSHGLG00000005625) ITGB8 (ENSHGLG00000009109) ENSHGLG00000007430 SP8 (ENSHGLG00000041939) SP4 (ENSHGLG00000014842) DNAH11 (ENSHGLG00000014062) ENSHGLG00000043520 ##22 CDCA7L (ENSHGLG00000005237) RAPGEF5 (ENSHGLG00000013551) ENSHGLG00000020692 ENSHGLG00000020842 ENSHGLG00000007816 TOMM7 (ENSHGLG00000006840) ENSHGLG00000045090 ENSHGLG00000016355 ENSHGLG00000016313 ENSHGLG00000016251 ENSHGLG00000033596 ENSHGLG00000014502 ENSHGLG00000039502 GPNMB (ENSHGLG00000014974) MALSU1 (ENSHGLG00000014820) Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00390000010116 ENSGT00940000162151 ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Guinea pig MODERN SPECIES 3 RBM45 (ENSCPOG00000000684) OSBPL6 (ENSCPOG00000002816) #9 ENSCPOG00000003900 #10 PJVK (ENSCPOG00000037882) #11 FKBP7 (ENSCPOG00000037159) #12 PLEKHA3 (ENSCPOG00000003906) #13 ENSCPOG00000036479 ENSCPOG00000034673 ENSCPOG00000038729 ENSCPOG00000030784 ##14 ENSCPOG00000032370 #14 CCDC141 (ENSCPOG00000003955) #15 ENSCPOG00000025835 #16 ZNF385B (ENSCPOG00000014985) #18 ENSCPOG00000007492 #21 UBE2E3 (ENSCPOG00000006996) #22 ITGA4 (ENSCPOG00000009479) #23 ENSCPOG00000009493 #24 NEUROD1 (ENSCPOG00000025248) #25 ENSCPOG00000031598 ITPRID2 (ENSCPOG00000025723) #26 PPP1R1C (ENSCPOG00000001191) #27 PDE1A (ENSCPOG00000004164) #28 DNAJC10 (ENSCPOG00000012956) #36 FRZB (ENSCPOG00000015013) #35 NCKAP1 (ENSCPOG00000011890) #34 DUSP19 (ENSCPOG00000035035) #33 NUP35 (ENSCPOG00000011906) #32 ENSCPOG00000034399 ZNF804A (ENSCPOG00000007581) ZC3H15 (ENSCPOG00000012965) Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT00920000150542 ENSGT00900000143154 ENSGT00900000143159 ENSGT01100000263523.B ##14 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Long-tailed chinchilla MODERN SPECIES 110 RBM45 (ENSCLAG00000015215) OSBPL6 (ENSCLAG00000011433) #9 PJVK (ENSCLAG00000010713) #11 PRKRA (ENSCLAG00000010338) #10 PLEKHA3 (ENSCLAG00000014135) #13 ENSCLAG00000016023 ENSCLAG00000015650 ENSCLAG00000015797 ENSCLAG00000014023 ENSCLAG00000015984 ##14 ENSCLAG00000016407 #14 CCDC141 (ENSCLAG00000014817) #15 SESTD1 (ENSCLAG00000011294) #16 ZNF385B (ENSCLAG00000014955) #18 CWC22 (ENSCLAG00000011118) #21 UBE2E3 (ENSCLAG00000013235) #22 ITGA4 (ENSCLAG00000011154) #23 ENSCLAG00000016232 #24 NEUROD1 (ENSCLAG00000016796) #25 ITPRID2 (ENSCLAG00000014062) #26 PPP1R1C (ENSCLAG00000013643) #27 PDE1A (ENSCLAG00000012535) #28 DNAJC10 (ENSCLAG00000015976) #36 FRZB (ENSCLAG00000012907) #35 NCKAP1 (ENSCLAG00000016496) #34 DUSP19 (ENSCLAG00000016586) #33 NUP35 (ENSCLAG00000012559) #32 FSIP2 (ENSCLAG00000013747) ZC3H15 (ENSCLAG00000016439) ITGAV (ENSCLAG00000015669) FAM171B (ENSCLAG00000014446) Degu DUPLICATION Degu MODERN SPECIES 66 UBE2E3 (ENSODEG00000012934) #22 ITGA4 (ENSODEG00000011915) #23 ENSODEG00000012379 CERKL (ENSODEG00000012012) #24 NEUROD1 (ENSODEG00000019934) #25 ITPRID2 (ENSODEG00000011169) #26 PPP1R1C (ENSODEG00000012042) #27 PDE1A (ENSODEG00000011693) #28 DNAJC10 (ENSODEG00000011257) #36 FRZB (ENSODEG00000011697) #35 NCKAP1 (ENSODEG00000012291) #34 DUSP19 (ENSODEG00000012741) #33 ENSODEG00000011202 #32 ENSODEG00000011356 ENSODEG00000010656 ZNF804A (ENSODEG00000011236) Degu MODERN SPECIES 266 KRTAP11-1 (ENSODEG00000018872) TIAM1 (ENSODEG00000002827) ENSODEG00000002788 SCAF4 (ENSODEG00000002718) ENSODEG00000002680 #22 HUNK (ENSODEG00000002662) MIS18A (ENSODEG00000002641) URB1 (ENSODEG00000002587) ENSODEG00000002530 EVA1C (ENSODEG00000002480) ENSODEG00000002448 ENSODEG00000002435 SYNJ1 (ENSODEG00000002409) PAXBP1 (ENSODEG00000002385) C21orf62 (ENSODEG00000002365) OLIG2 (ENSODEG00000018811) OLIG1 (ENSODEG00000019062) IL10RB (ENSODEG00000002346) IFNGR2 (ENSODEG00000003762) TMEM50B (ENSODEG00000003748) Degu MODERN SPECIES 44 SLC39A6 (ENSODEG00000018391) RPRD1A (ENSODEG00000018331) ENSODEG00000018309 GALNT1 (ENSODEG00000018395) ENSODEG00000020532 ENSODEG00000018436 ENSODEG00000018453 ENSODEG00000018420 ENSODEG00000020539 ZNF24 (ENSODEG00000018328) ENSODEG00000018345 ENSODEG00000018301 ZNF397 (ENSODEG00000018455) MAPRE2 (ENSODEG00000018430) DTNA (ENSODEG00000018476) ENSODEG00000018326 #22 NOL4 (ENSODEG00000018414) ASXL3 (ENSODEG00000018431) ENSODEG00000020529 KLHL14 (ENSODEG00000018307) ENSODEG00000018292 GAREM1 (ENSODEG00000018355) MEP1B (ENSODEG00000018454) ENSODEG00000018452 ENSODEG00000018406 ENSODEG00000018411 B4GALT6 (ENSODEG00000018324) TTR (ENSODEG00000018347) ENSODEG00000018312 DSG3 (ENSODEG00000018316) DSG4 (ENSODEG00000018468) Degu MODERN SPECIES 43 ENSODEG00000013802 #22 ENSODEG00000013478 ENSODEG00000013159 MAGEL2 (ENSODEG00000014234) Chrna7 (ENSODEG00000013998) OTUD7A (ENSODEG00000013975) ENSODEG00000013811 ENSODEG00000013964 ENSODEG00000014086 ENSODEG00000014974 ENSODEG00000013732 FAN1 (ENSODEG00000013994) ENSODEG00000013751 MCEE (ENSODEG00000014489) APBA2 (ENSODEG00000015323) ENTREP2 (ENSODEG00000013447) Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 12 PDE11A (ENSSVLG00005004050) ENSSVLG00005004113 RBM45 (ENSSVLG00005004137) OSBPL6 (ENSSVLG00005004465) #9 PRKRA (ENSSVLG00005005027) #10 PJVK (ENSSVLG00005005095) #11 ENSSVLG00005005163 FKBP7 (ENSSVLG00005005181) #12 PLEKHA3 (ENSSVLG00005005206) #13 ENSSVLG00005008368 CCDC141 (ENSSVLG00005020180) #15 SESTD1 (ENSSVLG00005020505) #16 ZNF385B (ENSSVLG00005020575) #18 CWC22 (ENSSVLG00005020797) #21 ENSSVLG00005020875 UBE2E3 (ENSSVLG00005020907) #22 ITGA4 (ENSSVLG00005021071) #23 ENSSVLG00005021354 #24 ENSSVLG00005021492 #24 NEUROD1 (ENSSVLG00005021545) #25 ENSSVLG00005021646 #26 PPP1R1C (ENSSVLG00005021961) #27 PDE1A (ENSSVLG00005022174) #28 ENSSVLG00005022726 DNAJC10 (ENSSVLG00005022791) #36 FRZB (ENSSVLG00005022871) #35 NCKAP1 (ENSSVLG00005023067) #34 ENSSVLG00005023310 #33 NUP35 (ENSSVLG00005023363) #32 ENSSVLG00005023415 ENSSVLG00005023439 Eurasian red squirrel MODERN SPECIES 6 ENSSVLG00005024201 VLDLR (ENSSVLG00005024232) KCNV2 (ENSSVLG00005024318) PUM3 (ENSSVLG00005024338) ENSSVLG00005024401 RFX3 (ENSSVLG00005024420) GLIS3 (ENSSVLG00005024543) SLC1A1 (ENSSVLG00005024569) SPATA6L (ENSSVLG00005024615) PLPP6 (ENSSVLG00005024689) CDC37L1 (ENSSVLG00005024699) ENSSVLG00005024721 RCL1 (ENSSVLG00005024752) JAK2 (ENSSVLG00005024808) INSL6 (ENSSVLG00005024849) ENSSVLG00005024871 #22 PLGRKT (ENSSVLG00005024908) CD274 (ENSSVLG00005024930) PDCD1LG2 (ENSSVLG00005024955) RIC1 (ENSSVLG00005025040) ERMP1 (ENSSVLG00005025117) MLANA (ENSSVLG00005025137) KIAA2026 (ENSSVLG00005025155) ENSSVLG00005025173 ENSSVLG00005025185 ENSSVLG00005025194 IL33 (ENSSVLG00005025230) ENSSVLG00005025276 ENSSVLG00005025282 TPD52L3 (ENSSVLG00005025288) UHRF2 (ENSSVLG00005025301) Marmotini ANCESTRAL SPECIES 2 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 7 ADAL (ENSMMMG00000018830) LCMT2 (ENSMMMG00000018863) TGM7 (ENSMMMG00000018868) TGM5 (ENSMMMG00000018903) EPB42 (ENSMMMG00000018914) CCNDBP1 (ENSMMMG00000018926) TMEM62 (ENSMMMG00000018944) UBR1 (ENSMMMG00000018995) TTBK2 (ENSMMMG00000019017) CDAN1 (ENSMMMG00000019058) ENSMMMG00000019240 ENSMMMG00000019261 HAUS2 (ENSMMMG00000019271) LRRC57 (ENSMMMG00000019283) SNAP23 (ENSMMMG00000019308) ENSMMMG00000019319 #22 ZNF106 (ENSMMMG00000019332) CAPN3 (ENSMMMG00000019416) GANC (ENSMMMG00000019671) TMEM87A (ENSMMMG00000019693) VPS39 (ENSMMMG00000019741) PLA2G4F (ENSMMMG00000019798) ENSMMMG00000019808 PLA2G4D (ENSMMMG00000019810) PLA2G4E (ENSMMMG00000019838) EHD4 (ENSMMMG00000019857) ENSMMMG00000019859 ENSMMMG00000019865 PLA2G4B (ENSMMMG00000019946) JMJD7 (ENSMMMG00000019970) MAPKBP1 (ENSMMMG00000019985) Alpin marmot MODERN SPECIES 8 RBM45 (ENSMMMG00000006272) OSBPL6 (ENSMMMG00000006453) #9 PRKRA (ENSMMMG00000006678) #10 PJVK (ENSMMMG00000006691) #11 FKBP7 (ENSMMMG00000006701) #12 PLEKHA3 (ENSMMMG00000006710) #13 ENSMMMG00000006717 ENSMMMG00000006724 ENSMMMG00000006744 ENSMMMG00000006759 ENSMMMG00000006770 #14 CCDC141 (ENSMMMG00000006792) #15 SESTD1 (ENSMMMG00000006844) #16 ZNF385B (ENSMMMG00000006885) #18 CWC22 (ENSMMMG00000007024) #21 UBE2E3 (ENSMMMG00000007195) #22 ITGA4 (ENSMMMG00000007234) #23 NEUROD1 (ENSMMMG00000008141) #25 ITPRID2 (ENSMMMG00000008161) #26 PPP1R1C (ENSMMMG00000008307) #27 PDE1A (ENSMMMG00000008326) #28 ENSMMMG00000008461 #36 ENSMMMG00000008493 FRZB (ENSMMMG00000008505) #35 NCKAP1 (ENSMMMG00000008514) #34 DUSP19 (ENSMMMG00000008569) #33 NUP35 (ENSMMMG00000008586) #32 ZNF804A (ENSMMMG00000008611) FSIP2 (ENSMMMG00000008640) ZC3H15 (ENSMMMG00000008693) ITGAV (ENSMMMG00000008706) Marmotini_b ANCESTRAL SPECIES 10 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a ENSGT01100000263532.B ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 Arctic ground squirrel MODERN SPECIES 96 RBM45 (ENSUPAG00010006036) OSBPL6 (ENSUPAG00010005891) #9 PRKRA (ENSUPAG00010005881) #10 PJVK (ENSUPAG00010005878) #11 FKBP7 (ENSUPAG00010005868) #12 PLEKHA3 (ENSUPAG00010005864) #13 ENSUPAG00010005857 ENSUPAG00010005854 ENSUPAG00010005849 ENSUPAG00010005845 ENSUPAG00010005828 CCDC141 (ENSUPAG00010005807) #15 SESTD1 (ENSUPAG00010005786) #16 ZNF385B (ENSUPAG00010005756) #18 CWC22 (ENSUPAG00010005695) #21 UBE2E3 (ENSUPAG00010005683) #22 ENSUPAG00010005673 ITGA4 (ENSUPAG00010005643) #23 NEUROD1 (ENSUPAG00010005612) #25 ITPRID2 (ENSUPAG00010004992) #26 PPP1R1C (ENSUPAG00010004979) #27 PDE1A (ENSUPAG00010004927) #28 DNAJC10 (ENSUPAG00010004900) #36 FRZB (ENSUPAG00010004895) #35 NCKAP1 (ENSUPAG00010004777) #34 DUSP19 (ENSUPAG00010004765) #33 NUP35 (ENSUPAG00010004759) #32 Squirrel MODERN SPECIES 109 OSBPL6 (ENSSTOG00000006092) #9 PRKRA (ENSSTOG00000006156) #10 PJVK (ENSSTOG00000028411) #11 FKBP7 (ENSSTOG00000006176) #12 PLEKHA3 (ENSSTOG00000006191) #13 ENSSTOG00000006208 ENSSTOG00000032899 ##14 ENSSTOG00000032305 ENSSTOG00000033165 ENSSTOG00000034976 ENSSTOG00000030724 #14 CCDC141 (ENSSTOG00000006896) #15 SESTD1 (ENSSTOG00000010529) #16 ZNF385B (ENSSTOG00000009646) #18 CWC22 (ENSSTOG00000009788) #21 UBE2E3 (ENSSTOG00000029106) #22 ITGA4 (ENSSTOG00000009849) #23 CERKL (ENSSTOG00000009874) #24 NEUROD1 (ENSSTOG00000019627) #25 ITPRID2 (ENSSTOG00000000562) #26 PPP1R1C (ENSSTOG00000033938) #27 PDE1A (ENSSTOG00000000575) #28 DNAJC10 (ENSSTOG00000020629) #36 FRZB (ENSSTOG00000000687) #35 NCKAP1 (ENSSTOG00000000691) #34 DUSP19 (ENSSTOG00000000708) #33 NUP35 (ENSSTOG00000000711) #32 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.A #14 ENSGT01100000263523.B ##14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.a ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Kangaroo rat MODERN SPECIES 324 ENSDORG00000023150 Cyct (ENSDORG00000004101) Rbm45 (ENSDORG00000015831) Osbpl6 (ENSDORG00000001912) #9 Prkra (ENSDORG00000013338) #10 Pjvk (ENSDORG00000013339) #11 Fkbp7 (ENSDORG00000013340) #12 Plekha3 (ENSDORG00000015344) #13 ENSDORG00000029166 ENSDORG00000029701 #14 ENSDORG00000027337 #15 Sestd1 (ENSDORG00000012622) #16 Zfp385b (ENSDORG00000011958) #18 ENSDORG00000011483 #21 ENSDORG00000024689 Ube2e3 (ENSDORG00000029942) #22 Itga4 (ENSDORG00000002412) #23 ENSDORG00000002419 #24 Neurod1 (ENSDORG00000023645) #25 Itprid2 (ENSDORG00000011182) #26 Ppp1r1c (ENSDORG00000014390) #27 Pde1a (ENSDORG00000000875) #28 Dnajc10 (ENSDORG00000004387) #36 Frzb (ENSDORG00000002556) #35 Nckap1 (ENSDORG00000008061) #34 Dusp19 (ENSDORG00000015309) #33 Nup35 (ENSDORG00000010458) #32 Zfp804a (ENSDORG00000011876) Fsip2 (ENSDORG00000027688) ENSDORG00000028289 ENSDORG00000011664 Myomorpha ANCESTRAL SPECIES 10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT01100000263523.B ##14 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.a ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Lesser Egyptian jerboa MODERN SPECIES 75 Rbm45 (ENSJJAG00000001312) Osbpl6 (ENSJJAG00000017863) #9 Prkra (ENSJJAG00000013031) #10 Pjvk (ENSJJAG00000012900) #11 Fkbp7 (ENSJJAG00000012221) #12 Plekha3 (ENSJJAG00000021299) #13 ENSJJAG00000015136 ENSJJAG00000009117 ENSJJAG00000002097 ENSJJAG00000002374 ##14 ENSJJAG00000020744 #14 ENSJJAG00000023764 #15 Sestd1 (ENSJJAG00000021516) #16 Zfp385b (ENSJJAG00000011065) #18 ENSJJAG00000017012 #21 Ube2e3 (ENSJJAG00000024202) #22 Itga4 (ENSJJAG00000021734) #23 ENSJJAG00000019445 #24 Neurod1 (ENSJJAG00000017656) #25 Itprid2 (ENSJJAG00000017764) #26 Ppp1r1c (ENSJJAG00000004026) #27 Pde1a (ENSJJAG00000010493) #28 Dnajc10 (ENSJJAG00000017845) #36 Frzb (ENSJJAG00000013147) #35 Nckap1 (ENSJJAG00000015103) #34 Dusp19 (ENSJJAG00000012971) #33 ENSJJAG00000016432 #32 Capza1b (ENSJJAG00000008304) ENSJJAG00000014835 Zfp804a (ENSJJAG00000000470) ENSJJAG00000021088 Muroidea ANCESTRAL SPECIES 34 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT01100000263523.B ##14 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.a ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Upper Galilee mountains blind mole rat MODERN SPECIES 585 Ube2e3 (ENSNGAG00000022261) #22 Itga4 (ENSNGAG00000023288) #23 ENSNGAG00000021953 #24 ENSNGAG00000019557 #24 Neurod1 (ENSNGAG00000020214) #25 Itprid2 (ENSNGAG00000011325) #26 Ppp1r1c (ENSNGAG00000022613) #27 Pde1a (ENSNGAG00000024006) #28 ENSNGAG00000023941 #36 Frzb (ENSNGAG00000021785) #35 Nckap1 (ENSNGAG00000013350) #34 Dusp19 (ENSNGAG00000018715) #33 Nup35 (ENSNGAG00000012107) #32 Zfp804a (ENSNGAG00000008125) Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT01100000263523.B ##14 ENSGT00900000143159 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.a.b ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Murinae ANCESTRAL SPECIES 1 ENSGT00390000010116.y.a.b ENSGT00390000010116.y.a.a ENSGT00940000162151 ENSGT00940000157883.a.b.e.a ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Rat MODERN SPECIES 13 Ttc30a1 (ENSRNOG00000052519) Ttc30a (ENSRNOG00000069321) Cyct (ENSRNOG00000024457) Rbm45 (ENSRNOG00000010595) Osbpl6 (ENSRNOG00000010812) #9 Prkra (ENSRNOG00000011195) #10 Pjvk (ENSRNOG00000038165) #11 Fkbp7 (ENSRNOG00000011758) #12 Plekha3 (ENSRNOG00000011830) #13 Ttn (ENSRNOG00000069271) #14 Ccdc141 (ENSRNOG00000012580) #15 Sestd1 (ENSRNOG00000012603) #16 Zfp385b (ENSRNOG00000019065) #18 Cwc22 (ENSRNOG00000012651) #21 RGD1564319 (ENSRNOG00000067541) Ube2e3 (ENSRNOG00000004544) #22 Itga4 (ENSRNOG00000004861) #23 Cerkl (ENSRNOG00000030212) #24 Neurod1 (ENSRNOG00000005609) #25 Itprid2 (ENSRNOG00000005865) #26 Ppp1r1c (ENSRNOG00000024990) #27 Pde1a (ENSRNOG00000054212) #28 Dnajc10 (ENSRNOG00000006803) #36 Frzb (ENSRNOG00000007765) #35 Nckap1 (ENSRNOG00000007518) #34 Dusp19 (ENSRNOG00000008868) #33 Nup35 (ENSRNOG00000009290) #32 LOC102547850 (ENSRNOG00000070077) Zfp804a (ENSRNOG00000038004) AABR07052692.1 (ENSRNOG00000047487) Fsip2 (ENSRNOG00000051199) Mus ANCESTRAL SPECIES 1 ENSGT00390000010116.y.a.b ENSGT00390000010116.y.a.a ENSGT00940000162151 ENSGT00940000157883.a.b.e.a ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00550000074794.eb ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025133 MGP_PahariEiJ_G0025134 Pde11a (MGP_PahariEiJ_G0025135) Cyct (MGP_PahariEiJ_G0025136) Rbm45 (MGP_PahariEiJ_G0025137) Osbpl6 (MGP_PahariEiJ_G0025138) #9 Prkra (MGP_PahariEiJ_G0025139) #10 Pjvk (MGP_PahariEiJ_G0025140) #11 Fkbp7 (MGP_PahariEiJ_G0025141) #12 Plekha3 (MGP_PahariEiJ_G0025142) #13 MGP_PahariEiJ_G0025143 #14 Ccdc141 (MGP_PahariEiJ_G0025144) #15 Sestd1 (MGP_PahariEiJ_G0025145) #16 Zfp385b (MGP_PahariEiJ_G0025146) #18 MGP_PahariEiJ_G0025147 #21 MGP_PahariEiJ_G0025148 #22 MGP_PahariEiJ_G0025149 #23 MGP_PahariEiJ_G0025150 #24 Neurod1 (MGP_PahariEiJ_G0025151) #25 Itprid2 (MGP_PahariEiJ_G0025152) #26 Ppp1r1c (MGP_PahariEiJ_G0025153) #27 Pde1a (MGP_PahariEiJ_G0025154) #28 Prdx6b (MGP_PahariEiJ_G0025155) Dnajc10 (MGP_PahariEiJ_G0025156) #36 Frzb (MGP_PahariEiJ_G0025157) #35 Nckap1 (MGP_PahariEiJ_G0025158) #34 Dusp19 (MGP_PahariEiJ_G0025159) #33 MGP_PahariEiJ_G0025160 #32 MGP_PahariEiJ_G0025161 #32 Zfp804a (MGP_PahariEiJ_G0025162) Fsip2 (MGP_PahariEiJ_G0025163) Mus_A ANCESTRAL SPECIES ENSGT00390000010116.y.a.b ENSGT00390000010116.y.a.a ENSGT00940000162151 ENSGT00940000157883.a.b.e.a ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00550000074794.eb ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0023682 Pde11a (MGP_CAROLIEiJ_G0023683) MGP_CAROLIEiJ_G0023684 Cyct (MGP_CAROLIEiJ_G0023685) Rbm45 (MGP_CAROLIEiJ_G0023686) Osbpl6 (MGP_CAROLIEiJ_G0023687) #9 Prkra (MGP_CAROLIEiJ_G0023688) #10 Pjvk (MGP_CAROLIEiJ_G0023689) #11 Fkbp7 (MGP_CAROLIEiJ_G0023690) #12 Plekha3 (MGP_CAROLIEiJ_G0023691) #13 Ttn (MGP_CAROLIEiJ_G0023692) #14 Ccdc141 (MGP_CAROLIEiJ_G0023693) #15 Sestd1 (MGP_CAROLIEiJ_G0023694) #16 Zfp385b (MGP_CAROLIEiJ_G0023695) #18 MGP_CAROLIEiJ_G0023696 #21 Ube2e3 (MGP_CAROLIEiJ_G0023697) #22 Itga4 (MGP_CAROLIEiJ_G0023698) #23 Cerkl (MGP_CAROLIEiJ_G0023699) #24 Neurod1 (MGP_CAROLIEiJ_G0023700) #25 Itprid2 (MGP_CAROLIEiJ_G0023701) #26 Ppp1r1c (MGP_CAROLIEiJ_G0023702) #27 Pde1a (MGP_CAROLIEiJ_G0023703) #28 Prdx6b (MGP_CAROLIEiJ_G0023704) Dnajc10 (MGP_CAROLIEiJ_G0023705) #36 Frzb (MGP_CAROLIEiJ_G0023706) #35 Nckap1 (MGP_CAROLIEiJ_G0023707) #34 Dusp19 (MGP_CAROLIEiJ_G0023708) #33 MGP_CAROLIEiJ_G0023709 #32 MGP_CAROLIEiJ_G0023710 #32 Zfp804a (MGP_CAROLIEiJ_G0023711) Fsip2 (MGP_CAROLIEiJ_G0023712) Mus_B ANCESTRAL SPECIES 1 ENSGT00390000010116.y.a.b ENSGT00390000010116.y.a.a ENSGT00940000162151 ENSGT00940000157883.a.b.e.a ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f.e #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00550000074794.eb ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f Mouse MODERN SPECIES 11 Ttc30a2 (ENSMUSG00000075272) Ttc30a1 (ENSMUSG00000075271) Pde11a (ENSMUSG00000075270) Cyct (ENSMUSG00000056436) Rbm45 (ENSMUSG00000042369) Osbpl6 (ENSMUSG00000042359) #9 Prkra (ENSMUSG00000002731) #10 Pjvk (ENSMUSG00000075267) #11 Fkbp7 (ENSMUSG00000002732) #12 Plekha3 (ENSMUSG00000002733) #13 Ttn (ENSMUSG00000051747) #14 Ccdc141 (ENSMUSG00000044033) #15 Sestd1 (ENSMUSG00000042272) #16 Zfp385b (ENSMUSG00000027016) #18 Cwc22 (ENSMUSG00000027014) #21 Ube2e3 (ENSMUSG00000027011) #22 Itga4 (ENSMUSG00000027009) #23 Cerkl (ENSMUSG00000075256) #24 Neurod1 (ENSMUSG00000034701) #25 Itprid2 (ENSMUSG00000027007) #26 Ppp1r1c (ENSMUSG00000034683) #27 Pde1a (ENSMUSG00000059173) #28 Prdx6b (ENSMUSG00000050114) Dnajc10 (ENSMUSG00000027006) #36 Frzb (ENSMUSG00000027004) #35 Nckap1 (ENSMUSG00000027002) #34 Dusp19 (ENSMUSG00000027001) #33 Nup35 (ENSMUSG00000026999) #32 Zfp804a (ENSMUSG00000070866) Fsip2 (ENSMUSG00000075249) Zc3h15 (ENSMUSG00000027091) Mus_C ANCESTRAL SPECIES ENSGT00940000156112 ENSGT00390000010116.y.b ENSGT00940000162151 ENSGT00940000157883.a.b.e.a ENSGT00680000100059 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f.e #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00550000074794.eb ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f spretus MODERN SPECIES 11 Nfe2l2 (MGP_SPRETEiJ_G0024602) Agps (MGP_SPRETEiJ_G0024603) MGP_SPRETEiJ_G0024604 Pde11a (MGP_SPRETEiJ_G0024605) Cyct (MGP_SPRETEiJ_G0024606) Rbm45 (MGP_SPRETEiJ_G0024607) Osbpl6 (MGP_SPRETEiJ_G0024608) #9 Prkra (MGP_SPRETEiJ_G0024609) #10 Pjvk (MGP_SPRETEiJ_G0024610) #11 Fkbp7 (MGP_SPRETEiJ_G0024611) #12 Plekha3 (MGP_SPRETEiJ_G0024612) #13 Ttn (MGP_SPRETEiJ_G0024613) #14 Ccdc141 (MGP_SPRETEiJ_G0024614) #15 Sestd1 (MGP_SPRETEiJ_G0024615) #16 Zfp385b (MGP_SPRETEiJ_G0024616) #18 Ube2e3 (MGP_SPRETEiJ_G0024618) #22 Itga4 (MGP_SPRETEiJ_G0024619) #23 Cerkl (MGP_SPRETEiJ_G0024620) #24 Neurod1 (MGP_SPRETEiJ_G0024621) #25 Itprid2 (MGP_SPRETEiJ_G0024622) #26 Ppp1r1c (MGP_SPRETEiJ_G0024623) #27 Pde1a (MGP_SPRETEiJ_G0024624) #28 Prdx6b (MGP_SPRETEiJ_G0024625) Dnajc10 (MGP_SPRETEiJ_G0024626) #36 Frzb (MGP_SPRETEiJ_G0024627) #35 Nckap1 (MGP_SPRETEiJ_G0024628) #34 Dusp19 (MGP_SPRETEiJ_G0024629) #33 MGP_SPRETEiJ_G0024630 #32 Zfp804a (MGP_SPRETEiJ_G0024631) Fsip2 (MGP_SPRETEiJ_G0024632) Zc3h15 (MGP_SPRETEiJ_G0024633) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2755 Cwc22 (ENSMSIG00000008052) #21 ENSMSIG00000008002 Ube2e3 (ENSMSIG00000007961) #22 Steppe mouse MODERN SPECIES 221 ENSMSIG00000022172 #22 Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT01100000263523.B ##14 ENSGT00900000143159 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.e.a.b ##21 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000156791 #9 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT00900000143154 ENSGT01100000263523.B ##14 ENSGT00900000143159 ENSGT01100000263523.A #14 ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00940000153458.B.f #21 ENSGT00940000153458.B.e.a.b ##21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00390000009405.b.f ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f Chinese hamster chok1gshd MODERN SPECIES 188 Pde11a (ENSCGRG00001011422) Cyct (ENSCGRG00001008096) Rbm45 (ENSCGRG00001005759) Osbpl6 (ENSCGRG00001002669) #9 Prkra (ENSCGRG00001009200) #10 Pjvk (ENSCGRG00001006219) #11 Fkbp7 (ENSCGRG00001004871) #12 Plekha3 (ENSCGRG00001002827) #13 ENSCGRG00001001535 ENSCGRG00001011823 ENSCGRG00001011105 #14 Ccdc141 (ENSCGRG00001009332) #15 Sestd1 (ENSCGRG00001013863) #16 Zfp385b (ENSCGRG00001019414) #18 ENSCGRG00001017005 #21 Ube2e3 (ENSCGRG00001015500) #22 Itga4 (ENSCGRG00001014691) #23 ENSCGRG00001019557 #24 Neurod1 (ENSCGRG00001005185) #25 Itprid2 (ENSCGRG00001003023) #26 Ppp1r1c (ENSCGRG00001024908) #27 Pde1a (ENSCGRG00001024848) #28 Dnajc10 (ENSCGRG00001024374) #36 Frzb (ENSCGRG00001017945) #35 Nckap1 (ENSCGRG00001016296) #34 Dusp19 (ENSCGRG00001019332) #33 Nup35 (ENSCGRG00001018638) #32 ENSCGRG00001004551 Zfp804a (ENSCGRG00001016790) ENSCGRG00001014325 ENSCGRG00001023073 Golden Hamster MODERN SPECIES 618 Osbpl6 (ENSMAUG00000018609) #9 Prkra (ENSMAUG00000019631) #10 Pjvk (ENSMAUG00000018018) #11 Fkbp7 (ENSMAUG00000016606) #12 Plekha3 (ENSMAUG00000019341) #13 ENSMAUG00000018786 ENSMAUG00000019513 ENSMAUG00000018562 ENSMAUG00000018214 ##14 ENSMAUG00000016510 #14 ENSMAUG00000001413 Ccdc141 (ENSMAUG00000016807) #15 Sestd1 (ENSMAUG00000019077) #16 Zfp385b (ENSMAUG00000017440) #18 ENSMAUG00000016154 ##21 Ube2e3 (ENSMAUG00000015025) #22 Itga4 (ENSMAUG00000016911) #23 Cerkl (ENSMAUG00000016321) #24 Neurod1 (ENSMAUG00000016034) #25 Ppp1r1c (ENSMAUG00000015644) #27 Pde1a (ENSMAUG00000018687) #28 ENSMAUG00000015614 #36 Frzb (ENSMAUG00000015424) #35 Nckap1 (ENSMAUG00000017749) #34 Dusp19 (ENSMAUG00000017669) #33 Nup35 (ENSMAUG00000013776) #32 ENSMAUG00000001395 Zfp804a (ENSMAUG00000015074) Fsip2 (ENSMAUG00000015106) Zc3h15 (ENSMAUG00000016743) Itgav (ENSMAUG00000015740) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000157618 #10 ENSGT00950000183140.a.b #11 ENSGT00940000159964 #12 ENSGT00940000155850 #13 ENSGT01100000263532.C.c.b ENSGT01100000263523.B ##14 ENSGT01100000263523.A #14 ENSGT00900000143154 ENSGT01100000263532.A.a.a.a.b.c.a ENSGT01100000263532.A.a.a.a.b.c.b ENSGT00440000038972 #15 ENSGT00730000111148 #16 ENSGT00940000155611.s #18 ENSGT00390000005421 #20 ENSGT00940000153458.B.f #21 ENSGT00940000155392 #22 ENSGT00940000158443 #23 ENSGT00940000157578 #24 ENSGT00940000160478 #25 ENSGT00940000158532 #26 ENSGT00940000160192 #27 ENSGT00940000157043 #28 ENSGT00940000155558 #36 ENSGT00940000160494 #35 ENSGT00390000016619.a #34 ENSGT00940000156472 #33 ENSGT00390000005923 #32 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 Prairie vole MODERN SPECIES 12 Prkra (ENSMOCG00000004548) #10 Pjvk (ENSMOCG00000006830) #11 Fkbp7 (ENSMOCG00000008125) #12 Plekha3 (ENSMOCG00000004146) #13 ENSMOCG00000015811 ENSMOCG00000017796 ##14 ENSMOCG00000017985 ENSMOCG00000019853 ENSMOCG00000002080 #14 Ccdc141 (ENSMOCG00000016129) #15 Sestd1 (ENSMOCG00000006024) #16 Zfp385b (ENSMOCG00000006938) #18 ENSMOCG00000008654 #20 ENSMOCG00000005265 #21 ENSMOCG00000001411 #21 Ube2e3 (ENSMOCG00000016543) #22 Itga4 (ENSMOCG00000019485) #23 ENSMOCG00000007880 #24 ENSMOCG00000009852 #24 Neurod1 (ENSMOCG00000001404) #25 Itprid2 (ENSMOCG00000022195) #26 Ppp1r1c (ENSMOCG00000001838) #27 Pde1a (ENSMOCG00000014778) #28 ENSMOCG00000013906 #36 Frzb (ENSMOCG00000001757) #35 Nckap1 (ENSMOCG00000020140) #34 Dusp19 (ENSMOCG00000021439) #33 Nup35 (ENSMOCG00000014754) #32 Zfp804a (ENSMOCG00000015465) Fsip2 (ENSMOCG00000008842) ENSMOCG00000020986 Northern American deer mouse DUPLICATION Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 17 Rbm45 (ENSPEMG00000002470) Osbpl6 (ENSPEMG00000010580) #9 Prkra (ENSPEMG00000011967) #10 Pjvk (ENSPEMG00000013970) #11 Fkbp7 (ENSPEMG00000011534) #12 Plekha3 (ENSPEMG00000021541) #13 Ttn (ENSPEMG00000022085) #14 ENSPEMG00000014359 ENSPEMG00000028754 ENSPEMG00000031084 ENSPEMG00000024072 #15 Sestd1 (ENSPEMG00000013464) #16 Zfp385b (ENSPEMG00000011546) #18 ENSPEMG00000023936 #21 ENSPEMG00000028400 ENSPEMG00000017108 #22 Itga4 (ENSPEMG00000013847) #23 Cerkl (ENSPEMG00000023559) #24 Neurod1 (ENSPEMG00000004936) #25 Itprid2 (ENSPEMG00000017593) #26 Ppp1r1c (ENSPEMG00000006349) #27 Pde1a (ENSPEMG00000014049) #28 Dnajc10 (ENSPEMG00000012995) #36 Frzb (ENSPEMG00000027349) #35 Nckap1 (ENSPEMG00000007640) #34 Dusp19 (ENSPEMG00000012593) #33 Nup35 (ENSPEMG00000014718) #32 Zfp804a (ENSPEMG00000024016) ENSPEMG00000002778 Or4p19 (ENSPEMG00000029115) Or4p18 (ENSPEMG00000028169) Northern American deer mouse MODERN SPECIES 14 Slc25a23 (ENSPEMG00000021021) Crb3 (ENSPEMG00000021919) Dennd1c (ENSPEMG00000023860) Tubb4a (ENSPEMG00000028633) Tnfsf9 (ENSPEMG00000020989) Cd70 (ENSPEMG00000015587) ENSPEMG00000011159 ENSPEMG00000015087 Tnfsf14 (ENSPEMG00000000292) ENSPEMG00000001526 Gpr108 (ENSPEMG00000030315) Trip10 (ENSPEMG00000017394) ENSPEMG00000031058 Vav1 (ENSPEMG00000015943) Adgre1 (ENSPEMG00000013357) ENSPEMG00000008525 #22 ENSPEMG00000028855 ENSPEMG00000030002 2610008E11Rik (ENSPEMG00000029764) ENSPEMG00000008518 ENSPEMG00000008828 Or7a36 (ENSPEMG00000011041) ENSPEMG00000009495 ENSPEMG00000015450 Ccdc105 (ENSPEMG00000008931) Casp14 (ENSPEMG00000003806) Or1i2 (ENSPEMG00000002732) Syde1 (ENSPEMG00000017967) Ilvbl (ENSPEMG00000016636) Or10b1 (ENSPEMG00000031391) Notch3 (ENSPEMG00000003368) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000011666 Pramex1 (ENSPEMG00000029817) Tcp11x2 (ENSPEMG00000014704) ENSPEMG00000026368 ENSPEMG00000006219 ENSPEMG00000031074 Armcx5 (ENSPEMG00000009750) ENSPEMG00000029192 ENSPEMG00000013496 Gprasp2 (ENSPEMG00000001857) Bhlhb9 (ENSPEMG00000015611) ENSPEMG00000025703 ENSPEMG00000025810 Pwwp3b (ENSPEMG00000031298) Fam199x (ENSPEMG00000022328) ENSPEMG00000022336 #22 ENSPEMG00000030442 Tex13a (ENSPEMG00000009571) ENSPEMG00000031375 ENSPEMG00000008826 Il1rapl2 (ENSPEMG00000002784) ENSPEMG00000009338 Serpina7 (ENSPEMG00000016392) ENSPEMG00000028394 ENSPEMG00000026482 ENSPEMG00000026764 Agtr2 (ENSPEMG00000003517) Slc6a14 (ENSPEMG00000022771) ENSPEMG00000028133 ENSPEMG00000027715 ENSPEMG00000025640 Lagomorpha ANCESTRAL SPECIES ENSGT00940000155392 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES ENSOCUG00000038405 CWF19L2 (ENSOCUG00000025398) ELMOD1 (ENSOCUG00000011869) ENSOCUG00000011876 SLC35F2 (ENSOCUG00000011878) RAB39A (ENSOCUG00000021112) CUL5 (ENSOCUG00000010907) ACAT1 (ENSOCUG00000002882) ATM (ENSOCUG00000014663) C11orf65 (ENSOCUG00000000044) ENSOCUG00000035350 POGLUT3 (ENSOCUG00000014539) EXPH5 (ENSOCUG00000016757) DDX10 (ENSOCUG00000003843) C11orf87 (ENSOCUG00000001196) ENSOCUG00000006972 #22 ZC3H12C (ENSOCUG00000005283) RDX (ENSOCUG00000014267) ENSOCUG00000032740 ENSOCUG00000017826 ENSOCUG00000031937 ARHGAP20 (ENSOCUG00000013948) ENSOCUG00000030051 ENSOCUG00000039274 ENSOCUG00000017811 ENSOCUG00000029694 POU2AF2 (ENSOCUG00000009285) POU2AF3 (ENSOCUG00000022422) POU2AF1 (ENSOCUG00000012566) ENSOCUG00000027498 HOATZ (ENSOCUG00000012891) Rabbit MODERN SPECIES 18 PRKRA (ENSOCUG00000005489) #10 PJVK (ENSOCUG00000005493) #11 FKBP7 (ENSOCUG00000024679) #12 PLEKHA3 (ENSOCUG00000005495) #13 ENSOCUG00000016777 ##14 ENSOCUG00000033996 ##14 ENSOCUG00000035152 ENSOCUG00000024537 ENSOCUG00000021281 CCDC141 (ENSOCUG00000016954) #15 SESTD1 (ENSOCUG00000017837) #16 ZNF385B (ENSOCUG00000004877) #18 ENSOCUG00000032017 #20 CWC22 (ENSOCUG00000002363) #21 ENSOCUG00000023586 ENSOCUG00000029359 #22 ENSOCUG00000033581 ITGA4 (ENSOCUG00000003008) #23 ENSOCUG00000021258 ENSOCUG00000031175 CERKL (ENSOCUG00000003021) #24 ENSOCUG00000012914 ENSOCUG00000007548 #25 ITPRID2 (ENSOCUG00000010134) #26 PPP1R1C (ENSOCUG00000010147) #27 PDE1A (ENSOCUG00000016522) #28 DNAJC10 (ENSOCUG00000029255) #36 FRZB (ENSOCUG00000010371) #35 ENSOCUG00000030787 NCKAP1 (ENSOCUG00000013133) #34 DUSP19 (ENSOCUG00000013156) #33