Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183126.a #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183126.a #22
Sarcopterygii	ANCESTRAL SPECIES	39																ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00940000165571	ENSGT00440000038972	ENSGT00940000154171.B
Tetrapoda	ANCESTRAL SPECIES	18	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190 #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00440000038972	ENSGT00940000154171.B	ENSGT00520000060291
Anura	ANCESTRAL SPECIES	14	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a.k	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.c.a.a.b #18	ENSGT00940000163190.c.a.a.a #16	ENSGT00950000183126.a #22	ENSGT00530000063435.b #24	ENSGT00390000012992 #25	ENSGT00940000156846 #26	ENSGT00940000160409 #27	ENSGT00950000182805.a.a.a.b #28	ENSGT00950000182805.a.a.a.a.a ##28	ENSGT00940000153615.a.a.a #30	ENSGT00940000160830 #32	ENSGT00390000010057	ENSGT00940000157635 #34	ENSGT00390000003618	ENSGT00390000017652	ENSGT00990000207345 #35	ENSGT00940000163056 #36	ENSGT00940000158337 #37
Frog	DUPLICATION
Frog	MODERN SPECIES	7	ski (ENSXETG00000015978) #7	ENSXETG00000044493 #8	ENSXETG00000045927 #9	morn1 (ENSXETG00000012097) #10	rer1 (ENSXETG00000027904) #11	pex10 (ENSXETG00000036482) #12	ENSXETG00000048923 #13	plch2 (ENSXETG00000012092) #14	pank4 (ENSXETG00000012083) #15	hes5.2 (ENSXETG00000042581) #16	grik5-like.1 (ENSXETG00000012091) #17	hes5.1 (ENSXETG00000040903) #18	ENSXETG00000049388 #19	ENSXETG00000048324 #20	ENSXETG00000037213 #21	tnfrsf14 (ENSXETG00000035588) #22	SPSB1 (ENSXETG00000035671) #23	h6pd (ENSXETG00000012078) #24	gpr157 (ENSXETG00000026559) #25	slc2a5 (ENSXETG00000011901) #26	ca6 (ENSXETG00000038646) #27	eno1 (ENSXETG00000011897) #28	ENSXETG00000041598 #29	rere (ENSXETG00000011890) #30	ENSXETG00000046088 #31	samd11 (ENSXETG00000032993) #32	noc2l (ENSXETG00000031054) #33	klhl17 (ENSXETG00000020253) #34	perm1 (ENSXETG00000035969) #35	hes4 (ENSXETG00000001769) #36	agrn (ENSXETG00000001763) #37
Frog	MODERN SPECIES	7	mxra8 (ENSXETG00000011119)	ENSXETG00000043776 ##13	dvl1 (ENSXETG00000011120)	cptp (ENSXETG00000011136)	ints11 (ENSXETG00000030716)	XB5721641 [provisional:lpar6] (ENSXETG00000011125)	sgf29 (ENSXETG00000011145)	acap3 (ENSXETG00000001021)	ENSXETG00000001030	pla2g2e (ENSXETG00000025326)	scnn1d (ENSXETG00000001026)	ube2j2 (ENSXETG00000036215)	c1qtnf12 (ENSXETG00000001035)	b3galt6 (ENSXETG00000045861)	sdf4 (ENSXETG00000001037)	ENSXETG00000036024 ##22	ENSXETG00000001040	znf177 (ENSXETG00000040989)	ENSXETG00000030249	ENSXETG00000001042	ENSXETG00000047340 ##9	ENSXETG00000042181	XB5846730 [provisional:nnmt] (ENSXETG00000043987)	ilvbl (ENSXETG00000004732)	ENSXETG00000039423	ENSXETG00000039642	zbtb40 (ENSXETG00000004737)	wnt4 (ENSXETG00000004742)	cdc42 (ENSXETG00000004743)	ap5b1 (ENSXETG00000004744)	c1orf50 (ENSXETG00000012074)
Leishan spiny toad	MODERN SPECIES	2	RCN2 (ENSLLEG00000015488)	TNFRSF9 (ENSLLEG00000015942)	SKI (ENSLLEG00000016156) #7	ENSLLEG00000016268	ENSLLEG00000016290	ENSLLEG00000016309	ENSLLEG00000016322 #13	MORN1 (ENSLLEG00000016340) #10	RER1 (ENSLLEG00000016480) #11	PEX10 (ENSLLEG00000016615) #12	PLCH2 (ENSLLEG00000016724) #14	ENSLLEG00000017844 #17	PANK4 (ENSLLEG00000018015) #15	ENSLLEG00000019106 #18	ENSLLEG00000019148 #16	ENSLLEG00000019210 #22	ENSLLEG00000008414	SPSB1 (ENSLLEG00000008476) #23	H6PD (ENSLLEG00000008566) #24	GPR157 (ENSLLEG00000008639) #25	SLC2A5 (ENSLLEG00000008695) #26	CA6 (ENSLLEG00000009024) #27	ENSLLEG00000009168 ##28	RERE (ENSLLEG00000009830) #30	SAMD11 (ENSLLEG00000010911) #32	NOC2L (ENSLLEG00000011332)	KLHL17 (ENSLLEG00000011466) #34	PLEKHN1 (ENSLLEG00000011766)	ENSLLEG00000011876	ENSLLEG00000011920	HES4 (ENSLLEG00000011946) #36
Amniota	ANCESTRAL SPECIES	202															ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161
Sauria	ANCESTRAL SPECIES	19	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429	ENSGT00940000154171.B
Archosauria	ANCESTRAL SPECIES	21	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000162566	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b	ENSGT00390000013405
Aves	ANCESTRAL SPECIES	27	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
African ostrich	MODERN SPECIES	499	GNB1 (ENSSCUG00000007532)	TMEM52 (ENSSCUG00000007534)	CFAP74 (ENSSCUG00000007539)	GABRD (ENSSCUG00000007544)	PRKCZ (ENSSCUG00000007549)	ENSSCUG00000007551	SKI (ENSSCUG00000007554) #7	RER1 (ENSSCUG00000007569) #11	PEX10 (ENSSCUG00000007572) #12	PLCH2 (ENSSCUG00000007579) #14	ENSSCUG00000007595 #17	PANK4 (ENSSCUG00000007621) #15	HES5 (ENSSCUG00000007663)	ENSSCUG00000007665 #16	ENSSCUG00000007669 #16	ENSSCUG00000007672 #22	MMEL1 (ENSSCUG00000007681)	TTC34 (ENSSCUG00000007694)	ENSSCUG00000007697	ENSSCUG00000007700	ARHGEF16 (ENSSCUG00000007714)	MEGF6 (ENSSCUG00000007729)	TPRG1L (ENSSCUG00000007750)	WRAP73 (ENSSCUG00000003941)	TP73 (ENSSCUG00000003942)	ENSSCUG00000003945	LRRC47 (ENSSCUG00000003949)	CEP104 (ENSSCUG00000003952)	DFFB (ENSSCUG00000003954)	ENSSCUG00000003955	AJAP1 (ENSSCUG00000003957)
Neognathae	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Golden eagle	MODERN SPECIES	22	GNB1 (ENSACCG00020011460)	TMEM52 (ENSACCG00020004021)	CFAP74 (ENSACCG00020004000)	GABRD (ENSACCG00020003979)	PRKCZ (ENSACCG00020003958)	ENSACCG00020003938	SKI (ENSACCG00020003930) #7	RER1 (ENSACCG00020003911) #11	PEX10 (ENSACCG00020003870) #12	PLCH2 (ENSACCG00020003849) #14	ENSACCG00020003820 #17	PANK4 (ENSACCG00020003810) #15	HES5 (ENSACCG00020003795)	ENSACCG00020003782 #16	ENSACCG00020003770 #16	ENSACCG00020003726 #22	MMEL1 (ENSACCG00020003566)	ENSACCG00020003411	ENSACCG00020003398	ENSACCG00020003389	PRDM16 (ENSACCG00020003329)	ARHGEF16 (ENSACCG00020003264)	MEGF6 (ENSACCG00020003162)	TPRG1L (ENSACCG00020003113)	WRAP73 (ENSACCG00020003094)	TP73 (ENSACCG00020002966)	LRRC47 (ENSACCG00020002851)	CEP104 (ENSACCG00020002813)	DFFB (ENSACCG00020002734)	C1orf174 (ENSACCG00020002720)	AJAP1 (ENSACCG00020002704)
Australian saltwater crocodile	MODERN SPECIES	45	CFAP74 (ENSCPRG00005012916)	GABRD (ENSCPRG00005012905)	PRKCZ (ENSCPRG00005012886)	ENSCPRG00005012875	SKI (ENSCPRG00005012873) #7	MORN1 (ENSCPRG00005012860) #10	RER1 (ENSCPRG00005012853) #11	PEX10 (ENSCPRG00005012846) #12	ENSCPRG00005012841	PLCH2 (ENSCPRG00005012713) #14	ENSCPRG00005012687 #17	PANK4 (ENSCPRG00005012645) #15	HES5 (ENSCPRG00005012644)	ENSCPRG00005012638 #16	ENSCPRG00005012630 #16	ENSCPRG00005012627 #22	PRXL2B (ENSCPRG00005012623)	MMEL1 (ENSCPRG00005012585)	TTC34 (ENSCPRG00005012574)	ENSCPRG00005012564	ENSCPRG00005012561	ENSCPRG00005012556	PRDM16 (ENSCPRG00005012448)	ARHGEF16 (ENSCPRG00005012418)	MEGF6 (ENSCPRG00005012388)	ENSCPRG00005012377	WRAP73 (ENSCPRG00005012374)	TPRG1L (ENSCPRG00005012371)	TP73 (ENSCPRG00005012358)	ENSCPRG00005012351	ENSCPRG00005012346
Cryptodira	ANCESTRAL SPECIES	24	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b
Testudinoidea	ANCESTRAL SPECIES	20	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00390000012265	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00390000012265	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00940000154171.B
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2440									PLCH2 (ENSCABG00000018762) #14	ENSCABG00000018757 #17	PANK4 (ENSCABG00000018338) #15	HES5 (ENSCABG00000018332)	ENSCABG00000018328 #16	ENSCABG00000018326 #16	ENSCABG00000018324 #22	ENSCABG00000018318 #22	ENSCABG00000018315	MMEL1 (ENSCABG00000018300)	TTC34 (ENSCABG00000018293)	ENSCABG00000018289	ACTRT2 (ENSCABG00000018288)	ENSCABG00000018287	ENSCABG00000018286	PRDM16 (ENSCABG00000018281)	ARHGEF16 (ENSCABG00000018280)	MEGF6 (ENSCABG00000018275)	TPRG1L (ENSCABG00000018268)	WRAP73 (ENSCABG00000018264)	TP73 (ENSCABG00000018237)	ENSCABG00000018228	SMIM1 (ENSCABG00000018225)
Abingdon island giant tortoise	MODERN SPECIES	2440										PLCH2 (ENSCABG00000018762) #14	ENSCABG00000018757 #17	PANK4 (ENSCABG00000018338) #15	HES5 (ENSCABG00000018332)	ENSCABG00000018328 #16	ENSCABG00000018326 #16	ENSCABG00000018324 #22	ENSCABG00000018318 #22	ENSCABG00000018315	MMEL1 (ENSCABG00000018300)	TTC34 (ENSCABG00000018293)	ENSCABG00000018289	ACTRT2 (ENSCABG00000018288)	ENSCABG00000018287	ENSCABG00000018286	PRDM16 (ENSCABG00000018281)	ARHGEF16 (ENSCABG00000018280)	MEGF6 (ENSCABG00000018275)	TPRG1L (ENSCABG00000018268)	WRAP73 (ENSCABG00000018264)	TP73 (ENSCABG00000018237)	ENSCABG00000018228
Goode s thornscrub tortoise	MODERN SPECIES	9	CALML6 (ENSGEVG00005015332)	TMEM52 (ENSGEVG00005015361)	GABRD (ENSGEVG00005015409)	PRKCZ (ENSGEVG00005015473)	ENSGEVG00005015552	SKI (ENSGEVG00005015579) #7	MORN1 (ENSGEVG00005015689) #10	RER1 (ENSGEVG00005015816) #11	PEX10 (ENSGEVG00005015844) #12	PLCH2 (ENSGEVG00005015960) #14	ENSGEVG00005016555 #17	PANK4 (ENSGEVG00005016583) #15	HES5 (ENSGEVG00005016617)	ENSGEVG00005016678 #16	ENSGEVG00005016710 #16	ENSGEVG00005016770 #22	ENSGEVG00005016839	MMEL1 (ENSGEVG00005016915)	TTC34 (ENSGEVG00005017278)	ENSGEVG00005017358	ACTRT2 (ENSGEVG00005017371)	ENSGEVG00005017385	ENSGEVG00005017392	PRDM16 (ENSGEVG00005017412)	ARHGEF16 (ENSGEVG00005017484)	MEGF6 (ENSGEVG00005017570)	TPRG1L (ENSGEVG00005017833)	WRAP73 (ENSGEVG00005017862)	ENSGEVG00005017886	TP73 (ENSGEVG00005017919)	ENSGEVG00005017964
Emydidae	ANCESTRAL SPECIES	23	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	10					ENSCPBG00000021365	ENSCPBG00000021395 #7	MORN1 (ENSCPBG00000021412) #10	RER1 (ENSCPBG00000021418) #11	PEX10 (ENSCPBG00000021422) #12	PLCH2 (ENSCPBG00000021426) #14	ENSCPBG00000021442 #17	PANK4 (ENSCPBG00000021446) #15	HES5 (ENSCPBG00000021450)	ENSCPBG00000021453 #16	ENSCPBG00000021455 #16	ENSCPBG00000021457 #22	ENSCPBG00000021459	MMEL1 (ENSCPBG00000021462)	TTC34 (ENSCPBG00000021474)	ENSCPBG00000021480	ACTRT2 (ENSCPBG00000021482)	ENSCPBG00000021484	PRDM16 (ENSCPBG00000021485)	ARHGEF16 (ENSCPBG00000021495)	MEGF6 (ENSCPBG00000021496)	ENSCPBG00000021498	ENSCPBG00000021501	PRDM2 (ENSCPBG00000021503)	ENSCPBG00000021505	LRRC38 (ENSCPBG00000021506)	ENSCPBG00000021507
painted turtle	MODERN SPECIES	1644																ENSCPBG00000008346 #22
Chinese turtle	MODERN SPECIES	1192	MRPL20 (ENSPSIG00000003939)	ENSPSIG00000003943	ANKRD65 (ENSPSIG00000003948)	CCNL2 (ENSPSIG00000003952)	ENSPSIG00000003957	AURKAIP1 (ENSPSIG00000003963)	MORN1 (ENSPSIG00000003969) #10	RER1 (ENSPSIG00000003973) #11	PEX10 (ENSPSIG00000003982) #12	PLCH2 (ENSPSIG00000003988) #14	ENSPSIG00000003997 #17	PANK4 (ENSPSIG00000004017) #15	HES5 (ENSPSIG00000004046)	ENSPSIG00000004058 #16	ENSPSIG00000004060 #16	ENSPSIG00000004072 #22	ENSPSIG00000004078	TTC34 (ENSPSIG00000004087)	ENSPSIG00000001325	ACTRT2 (ENSPSIG00000000593)	PRDM16 (ENSPSIG00000004093)	ARHGEF16 (ENSPSIG00000004107)	ENSPSIG00000004127	ENSPSIG00000004131	TPRG1L (ENSPSIG00000004141)	WRAP73 (ENSPSIG00000004149)	TP73 (ENSPSIG00000004164)	CCDC27 (ENSPSIG00000004187)	SMIM1 (ENSPSIG00000004193)	LRRC47 (ENSPSIG00000004196)	CEP104 (ENSPSIG00000004209)
Lepidosauria	ANCESTRAL SPECIES	34	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309
Laterata	ANCESTRAL SPECIES	29	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	16	CFAP74 (ENSPMRG00000014885)	GABRD (ENSPMRG00000014913)	PRKCZ (ENSPMRG00000014923)	SKI (ENSPMRG00000014948) #7	ENSPMRG00000006957	MORN1 (ENSPMRG00000006973) #10	RER1 (ENSPMRG00000006990) #11	PEX10 (ENSPMRG00000007006) #12	ENSPMRG00000007013	PLCH2 (ENSPMRG00000007031) #14	PANK4 (ENSPMRG00000007090) #15	ENSPMRG00000007153 #17	HES5 (ENSPMRG00000007168)	ENSPMRG00000007178 #16	ENSPMRG00000007191 #16	ENSPMRG00000007216 #22	ENSPMRG00000007249 #22	ENSPMRG00000007270	MMEL1 (ENSPMRG00000007607)	TTC34 (ENSPMRG00000008281)	ENSPMRG00000008300	ENSPMRG00000008310	ENSPMRG00000008318	ENSPMRG00000008325	ENSPMRG00000008341	PRDM16 (ENSPMRG00000008389)	ARHGEF16 (ENSPMRG00000008467)	MEGF6 (ENSPMRG00000008547)	ENSPMRG00000008738	TPRG1L (ENSPMRG00000008744)	WRAP73 (ENSPMRG00000008757)
Common wall lizard	MODERN SPECIES	16	TP73 (ENSPMRG00000008786)	WRAP73 (ENSPMRG00000008757)	TPRG1L (ENSPMRG00000008744)	ENSPMRG00000008738	MEGF6 (ENSPMRG00000008547)	ARHGEF16 (ENSPMRG00000008467)	PRDM16 (ENSPMRG00000008389)	ENSPMRG00000008341	ENSPMRG00000008325	ENSPMRG00000008318	ENSPMRG00000008310	ENSPMRG00000008300	TTC34 (ENSPMRG00000008281)	MMEL1 (ENSPMRG00000007607)	ENSPMRG00000007270	ENSPMRG00000007249 #22	ENSPMRG00000007216 #22	ENSPMRG00000007191 #16	ENSPMRG00000007178 #16	HES5 (ENSPMRG00000007168)	ENSPMRG00000007153 #17	PANK4 (ENSPMRG00000007090) #15	PLCH2 (ENSPMRG00000007031) #14	ENSPMRG00000007013	PEX10 (ENSPMRG00000007006) #12	RER1 (ENSPMRG00000006990) #11	MORN1 (ENSPMRG00000006973) #10	ENSPMRG00000006957	SKI (ENSPMRG00000014948) #7	PRKCZ (ENSPMRG00000014923)	GABRD (ENSPMRG00000014913)
Argentine black and white tegu	MODERN SPECIES	60	GNB1 (ENSSMRG00000009066)	CALML6 (ENSSMRG00000009065)	TMEM52 (ENSSMRG00000009064)	CFAP74 (ENSSMRG00000009058)	GABRD (ENSSMRG00000009056)	PRKCZ (ENSSMRG00000009048)	SKI (ENSSMRG00000009047) #7	RER1 (ENSSMRG00000009022) #11	PEX10 (ENSSMRG00000009021) #12	PLCH2 (ENSSMRG00000009016) #14	ENSSMRG00000009013 #17	PANK4 (ENSSMRG00000009012) #15	HES5 (ENSSMRG00000009011)	ENSSMRG00000008969 #16	ENSSMRG00000008967 #16	ENSSMRG00000008964 #22	ENSSMRG00000008963	ENSSMRG00000008959	ENSSMRG00000008956	PRDM16 (ENSSMRG00000008949)	ARHGEF16 (ENSSMRG00000008948)	MEGF6 (ENSSMRG00000008947)	TPRG1L (ENSSMRG00000008945)	WRAP73 (ENSSMRG00000008944)	TP73 (ENSSMRG00000008941)	ENSSMRG00000008939	ENSSMRG00000008938	MRPS16 (ENSSMRG00000008936)	ENSSMRG00000008932	SLC45A1 (ENSSMRG00000008924)	ENSSMRG00000008921
Toxicofera	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b
Elapidae	ANCESTRAL SPECIES	7	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b
Elapidae_a	ANCESTRAL SPECIES	38	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000162451	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b
Blue-lipped sea krait	MODERN SPECIES	9263														ENSLLTG00000012332 #16	ENSLLTG00000012337 #16	ENSLLTG00000012344 #22
Acanthophiinae	ANCESTRAL SPECIES	38	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000162451	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b
Mainland tiger snake	MODERN SPECIES	391										PEX10 (ENSNSUG00000000134) #12	PLCH2 (ENSNSUG00000000150) #14	ENSNSUG00000000431 #17	PANK4 (ENSNSUG00000000435) #15	ENSNSUG00000000670 #16	ENSNSUG00000000671 #16	ENSNSUG00000000677 #22	ENSNSUG00000000685	ENSNSUG00000000692
Lizard	MODERN SPECIES	1473																tnfrsf14 (ENSACAG00000041321) #22	ENSACAG00000007852
tuatara	MODERN SPECIES	419				PRKCZ (ENSSPUG00000016395)	ENSSPUG00000016383	SKI (ENSSPUG00000016375) #7	MORN1 (ENSSPUG00000016248) #10	RER1 (ENSSPUG00000016213) #11	PEX10 (ENSSPUG00000016205) #12	PLCH2 (ENSSPUG00000015751) #14	ENSSPUG00000015611 #17	PANK4 (ENSSPUG00000015585) #15	HES5 (ENSSPUG00000015571)	ENSSPUG00000015553 #16	ENSSPUG00000015538	ENSSPUG00000015518 #22	MMEL1 (ENSSPUG00000015492)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	224	ENSLACG00000018022	AQP2 (ENSLACG00000018002)	ENSLACG00000017980	RACGAP1 (ENSLACG00000017960)	ENSLACG00000017872	ENSLACG00000017824	ENSLACG00000017709	ENSLACG00000017672	ENSLACG00000022570	krt18b (ENSLACG00000017551)	EIF4B (ENSLACG00000017403)	TNS2 (ENSLACG00000017057)	IGFBP6 (ENSLACG00000016812)	ENSLACG00000016763	ENSLACG00000016708	ENSLACG00000016638 #22	ENSLACG00000022244	SOAT2 (ENSLACG00000016553)	ITGB7 (ENSLACG00000016456)	RARG (ENSLACG00000016217)	nr1d4b (ENSLACG00000014857)	MFSD5 (ENSLACG00000014751)	ESPL1 (ENSLACG00000014488)	PFDN5 (ENSLACG00000014432)	MYG1 (ENSLACG00000014129)	ENSLACG00000013751	AAAS (ENSLACG00000013500)	SP7 (ENSLACG00000013206)	SP1 (ENSLACG00000011942)	SORL1 (ENSLACG00000010857)	SC5D (ENSLACG00000009872)
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	223	UBE2J2 (ENSLACG00000018733)	SCNN1D (ENSLACG00000018741)	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076
Coelacanth	MODERN SPECIES	223	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076	ENSLACG00000019078	CCDC27 (ENSLACG00000019080)
Coelacanth	MODERN SPECIES	223	SCNN1D (ENSLACG00000018741)	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076	ENSLACG00000019078
Actinopterygii	ANCESTRAL SPECIES	824														ENSGT00940000153395.b	ENSGT00940000154171.B	ENSGT00950000183126.a #22
Reedfish	DUPLICATION
Reedfish	DUPLICATION
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	331																ENSECRG00000018828 #22	ENSECRG00000018870
Reedfish	MODERN SPECIES	16	nabp1a (ENSECRG00000018337)	cavin2b (ENSECRG00000018322)	ENSECRG00000018305	ENSECRG00000018281	tmeff2a (ENSECRG00000018267)	ENSECRG00000018242	ENSECRG00000018225	ENSECRG00000018196	ENSECRG00000018156	slc39a10 (ENSECRG00000018105)	DNAH7 (ENSECRG00000017896)	LRRFIP1 (ENSECRG00000017765)	masp2 (ENSECRG00000017707)	mad2l2 (ENSECRG00000017629)	ENSECRG00000017582	ENSECRG00000017541 #22	ENSECRG00000017512 #22	ENSECRG00000017484	bzw1a (ENSECRG00000017446)	ENSECRG00000017415	ugt1b5 (ENSECRG00000017375)	ENSECRG00000017330	cdk11b (ENSECRG00000017277)	ENSECRG00000017232	glb1l (ENSECRG00000017204)	satb2 (ENSECRG00000017155)	ENSECRG00000017125	ENSECRG00000017101	lrrc47 (ENSECRG00000017072)	ENSECRG00000017054	b3gnt7l (ENSECRG00000017012)
Reedfish	MODERN SPECIES	16	cavin2b (ENSECRG00000018322)	ENSECRG00000018305	ENSECRG00000018281	tmeff2a (ENSECRG00000018267)	ENSECRG00000018242	ENSECRG00000018225	ENSECRG00000018196	ENSECRG00000018156	slc39a10 (ENSECRG00000018105)	DNAH7 (ENSECRG00000017896)	LRRFIP1 (ENSECRG00000017765)	masp2 (ENSECRG00000017707)	mad2l2 (ENSECRG00000017629)	ENSECRG00000017582	ENSECRG00000017541 #22	ENSECRG00000017512 #22	ENSECRG00000017484	bzw1a (ENSECRG00000017446)	ENSECRG00000017415	ugt1b5 (ENSECRG00000017375)	ENSECRG00000017330	cdk11b (ENSECRG00000017277)	ENSECRG00000017232	glb1l (ENSECRG00000017204)	satb2 (ENSECRG00000017155)	ENSECRG00000017125	ENSECRG00000017101	lrrc47 (ENSECRG00000017072)	ENSECRG00000017054	b3gnt7l (ENSECRG00000017012)	ENSECRG00000016988
Reedfish	MODERN SPECIES	17	ENSECRG00000008347	zgc:92606 (ENSECRG00000008356)	ENSECRG00000008370	emg1 (ENSECRG00000008388)	ENSECRG00000008398	ENSECRG00000008404	ENSECRG00000008410	nop2 (ENSECRG00000008420)	ing4 (ENSECRG00000008453)	ncapd2 (ENSECRG00000008492)	ENSECRG00000008543	gapdh (ENSECRG00000008565)	opn9 (ENSECRG00000008619)	IFFO1 (ENSECRG00000008680)	ENSECRG00000008701	ENSECRG00000008717 #22	ENSECRG00000008738	ENSECRG00000008764	ENSECRG00000008779	ENSECRG00000008790	ENSECRG00000008803	VAMP1 (ENSECRG00000008811)	mrpl51 (ENSECRG00000008820)	ENSECRG00000008833	ENSECRG00000008850 ##29	ENSECRG00000008860	ENSECRG00000008883	ENSECRG00000008910	ENSECRG00000008924	RIMKLB (ENSECRG00000008945)	ENSECRG00000008964
Neopterygii	DUPLICATION
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES	28	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT00940000153395.b	ENSGT00940000154171.B	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942 #17	ENSGT00940000158374 #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Osteoglossocephalai	ANCESTRAL SPECIES	841																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Clupeocephala	ANCESTRAL SPECIES	114	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390
Otomorpha	ANCESTRAL SPECIES	198		ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	309		ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00390000011364	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m
Characiphysae_b	ANCESTRAL SPECIES	103	ENSGT00390000011364	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT00390000011947	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22
Electric eel	DUPLICATION
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	799										ENSEEEG00000006231	ENSEEEG00000006121	MFSD12 (ENSEEEG00000006117)	csnk1g2b (ENSEEEG00000006059)	zgc:101100 (ENSEEEG00000006052)	rexo1 (ENSEEEG00000006048)	ENSEEEG00000006042 #22
Electric eel	MODERN SPECIES	220											lhx4 (ENSEEEG00000012297)	qsox1 (ENSEEEG00000012293)	ENSEEEG00000012288	ENSEEEG00000012282	CACNA1E (ENSEEEG00000011866)	ENSEEEG00000011854 #22	zgc:158862 (ENSEEEG00000011853) #22	cbwd (ENSEEEG00000011849)	foxd5 (ENSEEEG00000011846)	pgm5 (ENSEEEG00000011741)	ENSEEEG00000011735	smim15 (ENSEEEG00000011734)	ndufaf2 (ENSEEEG00000011732)	ercc8 (ENSEEEG00000011665)	elovl7a (ENSEEEG00000011663)	ENSEEEG00000011662	ENSEEEG00000011661	PDE4D (ENSEEEG00000011209)	rab3c (ENSEEEG00000011194)	si:dkey-190g11.3 (ENSEEEG00000011189)	plk2b (ENSEEEG00000010909)
Electric eel	MODERN SPECIES	111	wdr6 (ENSEEEG00000021523)	SLC26A6 (ENSEEEG00000021527)	mgll (ENSEEEG00000021528)	prkar2aa (ENSEEEG00000021529)	hyal3 (ENSEEEG00000000088)	NAA80 (ENSEEEG00000000104)	amt (ENSEEEG00000000290)	ifrd2 (ENSEEEG00000000655)	dffb (ENSEEEG00000000834)	ENSEEEG00000000839	b3gnt7l (ENSEEEG00000000842)	CEP104 (ENSEEEG00000000848)	lrrc47 (ENSEEEG00000000853)	ENSEEEG00000000855	mad2l2 (ENSEEEG00000000859)	ENSEEEG00000000864 #22	ENSEEEG00000000872	ABTB1 (ENSEEEG00000000901)	slc6a6a (ENSEEEG00000001044)	grip2a (ENSEEEG00000003094)	ssuh2rs1 (ENSEEEG00000003111)	ENSEEEG00000003112	ENSEEEG00000003118	ENSEEEG00000003556	cdk20 (ENSEEEG00000003560)	hcfc1b (ENSEEEG00000003562)	ENSEEEG00000003563	mecp2 (ENSEEEG00000003570)	ENSEEEG00000003583	FGD1 (ENSEEEG00000003585)	tfe3a (ENSEEEG00000003588)
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c
Characiphysae_b	ANCESTRAL SPECIES	100															ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c
Characoidei	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k	ENSGT00390000017443
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1348															ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	508	ENSPNAG00000017703	mgll (ENSPNAG00000017722)	prkar2aa (ENSPNAG00000017782)	NAA80 (ENSPNAG00000017796)	si:dkey-20d21.12 (ENSPNAG00000017811)	hyal3 (ENSPNAG00000017818)	amt (ENSPNAG00000003500)	ifrd2 (ENSPNAG00000017950)	dffb (ENSPNAG00000017957)	ENSPNAG00000017964	b3gnt7l (ENSPNAG00000017967)	CEP104 (ENSPNAG00000017976)	lrrc47 (ENSPNAG00000017982)	SMIM1 (ENSPNAG00000018000)	mad2l2 (ENSPNAG00000003503)	ENSPNAG00000018124 #22	ENSPNAG00000018170 #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	2350																ENSPNAG00000024540 #22
Red-bellied piranha	MODERN SPECIES	1348												ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	516															ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)	mrps36 (ENSPNAG00000014559)
Red-bellied piranha	MODERN SPECIES	1348													ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Mexicana tetra	MODERN SPECIES	1361															ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	24	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)
Channel catfish	MODERN SPECIES	24	slc26a6 (ENSIPUG00000006973)	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b #22
Characoidei	DUPLICATION
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b.a #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	793														ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Mexicana tetra	MODERN SPECIES	809																ENSAMXG00000036686 #22	mad2l2 (ENSAMXG00000030612)
Mexicana tetra	MODERN SPECIES	1238														ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Red-bellied piranha	MODERN SPECIES	516																ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b.b #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	1238															ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Mexicana tetra	MODERN SPECIES	793																ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Mexicana tetra	MODERN SPECIES	1361														ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Mexicana tetra	MODERN SPECIES	1238																ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Mexicana tetra	MODERN SPECIES	793															ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Cyprinoidei	DUPLICATION
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.c.a #22
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)
Zebrafish	MODERN SPECIES	23	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052
Zebrafish	MODERN SPECIES	23	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)
Cyprininae	ANCESTRAL SPECIES	6	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f
Cyprininae_a	ANCESTRAL SPECIES	607									ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	538	ela2 (ENSSGRG00000026754)	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Golden-line barbel	MODERN SPECIES	4603																ENSSGRG00000003089 #22
Common carp reference	MODERN SPECIES	23	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3327						NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Goldfish	MODERN SPECIES	852							ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.c.b.a #22
Cyprininae	ANCESTRAL SPECIES	1468																ENSGT00950000183126.a.p.a.a.c.b.a #22	ENSGT00950000183126.a.p.b.h.b #22
Cyprininae_a	ANCESTRAL SPECIES	607								ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	MODERN SPECIES	538	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Common carp reference	MODERN SPECIES	23	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841
Goldfish	MODERN SPECIES	852						ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT01030000234528.B.a.a.b.a	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b	ENSGT00940000168127.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37						ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a	ENSGT00940000156911.i.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000168127.a.a.a
Common carp reference	MODERN SPECIES	17	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)	ENSCCRG00000014062
Golden-line barbel	MODERN SPECIES	15	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328	nkain5 (ENSSGRG00000030330)
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2176															ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	2176																ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	2757						ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d
Cyprininae_a	ANCESTRAL SPECIES	190																ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a.g	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT01030000234637.b.c.g.a	ENSGT00990000210169	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a
Common carp reference	MODERN SPECIES	23	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841	samd10a (ENSCCRG00000014083)
Zebrafish	MODERN SPECIES	23	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)	uckl1a (ENSDARG00000001686)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT01030000234528.B.a.a.a	ENSGT01030000234528.B.a.a.b.a	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	852								ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Goldfish	MODERN SPECIES	3327							NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae_a	ANCESTRAL SPECIES	607										ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	MODERN SPECIES	538	ela2l (ENSSGRG00000026771)	ela2 (ENSSGRG00000026754)	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Common carp reference	MODERN SPECIES	23	cry3a (ENSCCRG00000055194)	ENSCCRG00000055400	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581
Cyprininae	ANCESTRAL SPECIES	37							ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b
Golden-line barbel	MODERN SPECIES	15	itpr3 (ENSSGRG00000021747)	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328
Common carp reference	MODERN SPECIES	17	fhad1 (ENSCCRG00000031431)	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	873								ENSCARG00000058694	dffb (ENSCARG00000058726)	si:ch211-147a11.3 (ENSCARG00000058888)	b3gnt7l (ENSCARG00000058899)	CEP104 (ENSCARG00000058932)	lrrc47 (ENSCARG00000059069)	ENSCARG00000059084	mad2l2 (ENSCARG00000059105)	ENSCARG00000059158 #22	ENSCARG00000059172 #22	ENSCARG00000059200	ENSCARG00000059214	csde1 (ENSCARG00000059438)	porcnl (ENSCARG00000064562)	PDZD4 (ENSCARG00000064637)	IQSEC2 (ENSCARG00000064654)	ENSCARG00000064825	cacna1fb (ENSCARG00000064845)	sypa (ENSCARG00000065103)	samd10a (ENSCARG00000065114)	si:dkey-70p6.1 (ENSCARG00000065130)	nkain5 (ENSCARG00000065137)	ythdf1 (ENSCARG00000065145)	gid8a (ENSCARG00000065166)
Goldfish	MODERN SPECIES	2757							ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00940000157078.e	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	852									ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Goldfish	MODERN SPECIES	3327								NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae_a	ANCESTRAL SPECIES	607											ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Common carp reference	MODERN SPECIES	23	col2a1a (ENSCCRG00000058874)	cry3a (ENSCCRG00000055194)	ENSCCRG00000055400	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	ela2l (ENSDARG00000056765)	ela2 (ENSDARG00000056744)	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)
Zebrafish	MODERN SPECIES	23	alas2 (ENSDARG00000038643)	ela2l (ENSDARG00000056765)	ela2 (ENSDARG00000056744)	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108
Otophysi	ANCESTRAL SPECIES	309			ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b
Characiphysae_b	ANCESTRAL SPECIES	100																ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b
Characoidei	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	508	mgll (ENSPNAG00000017722)	prkar2aa (ENSPNAG00000017782)	NAA80 (ENSPNAG00000017796)	si:dkey-20d21.12 (ENSPNAG00000017811)	hyal3 (ENSPNAG00000017818)	amt (ENSPNAG00000003500)	ifrd2 (ENSPNAG00000017950)	dffb (ENSPNAG00000017957)	ENSPNAG00000017964	b3gnt7l (ENSPNAG00000017967)	CEP104 (ENSPNAG00000017976)	lrrc47 (ENSPNAG00000017982)	SMIM1 (ENSPNAG00000018000)	mad2l2 (ENSPNAG00000003503)	ENSPNAG00000018124 #22	ENSPNAG00000018170 #22
Red-bellied piranha	MODERN SPECIES	1348																ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	1348														ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Mexicana tetra	MODERN SPECIES	1361																ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Channel catfish	MODERN SPECIES	24	wdr6 (ENSIPUG00000006934)	slc26a6 (ENSIPUG00000006973)	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.b #22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37								ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000157078.e	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c
Golden-line barbel	MODERN SPECIES	15	GPR37L1 (ENSSGRG00000021688)	itpr3 (ENSSGRG00000021747)	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)
Common carp reference	MODERN SPECIES	17	alas2 (ENSCCRG00000062931)	ela2l (ENSCCRG00000031426)	fhad1 (ENSCCRG00000031431)	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731
Goldfish	MODERN SPECIES	2757								ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	1091													ENSGT00390000008296.b.b.c	ENSGT00390000011483	ENSGT00390000009531	ENSGT00950000183126.a.p.a.b.d #22
Cyprininae_a	ANCESTRAL SPECIES	638									ENSGT00390000012078.b.hb.a	ENSGT00940000156411.n	ENSGT00390000018845.e.f	ENSGT00940000157066.p.g	ENSGT00390000008296.b.b.c	ENSGT00390000011483	ENSGT00390000009531.b	ENSGT00950000183126.a.p.a.b.d #22
Golden-line barbel	MODERN SPECIES	3809																ENSSGRG00000007217 #22
Common carp reference	MODERN SPECIES	45	LHFPL2 (ENSCCRG00000075460)	ENSCCRG00000058411	ENSCCRG00000019400	ENSCCRG00000035602	RAD23B (ENSCCRG00000080999)	ENSCCRG00000024396	ZNF462 (ENSCCRG00000071627)	TMEM38B (ENSCCRG00000002998)	ENSCCRG00000047625	ENSCCRG00000067573	ENSCCRG00000046851	ENSCCRG00000057866	ENSCCRG00000056590	ENSCCRG00000022743	ENSCCRG00000077787	ENSCCRG00000062714 #22	ENSCCRG00000075362	ENSCCRG00000068501	ENSCCRG00000071480	ENSCCRG00000053540	ENSCCRG00000057029	ENSCCRG00000056717	ENSCCRG00000024127	ENSCCRG00000021731	ENSCCRG00000055376	ENSCCRG00000031976	ENSCCRG00000028587	ENSCCRG00000061694	ENSCCRG00000029501	zgc:152948 (ENSCCRG00000029498)	ENSCCRG00000066445
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2790										ENSCARG00000064506	oaz1b (ENSCARG00000064488)	ENSCARG00000063724	ENSCARG00000063649	ENSCARG00000063638	ENSCARG00000063611 #22	ENSCARG00000063598 #22	ENSCARG00000063590	ENSCARG00000063585
Goldfish	MODERN SPECIES	707									ENSCARG00000038789	ENSCARG00000038801	oaz1b (ENSCARG00000038828)	ENSCARG00000038930	ENSCARG00000040276	ENSCARG00000040294	ENSCARG00000040303	ENSCARG00000040313 #22	ENSCARG00000040330 #22	ENSCARG00000040342	ENSCARG00000040350	ENSCARG00000040356	ENSCARG00000040361 #22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	707								ENSCARG00000038789	ENSCARG00000038801	oaz1b (ENSCARG00000038828)	ENSCARG00000038930	ENSCARG00000040276	ENSCARG00000040294	ENSCARG00000040303	ENSCARG00000040313 #22	ENSCARG00000040330 #22	ENSCARG00000040342	ENSCARG00000040350	ENSCARG00000040356	ENSCARG00000040361 #22
Goldfish	MODERN SPECIES	2790											ENSCARG00000064506	oaz1b (ENSCARG00000064488)	ENSCARG00000063724	ENSCARG00000063649	ENSCARG00000063638	ENSCARG00000063611 #22	ENSCARG00000063598 #22	ENSCARG00000063590	ENSCARG00000063585
Goldfish	MODERN SPECIES	13																ENSCARG00000016138 #22	ENSCARG00000016118	ENSCARG00000016111	ENSCARG00000016103	ENSCARG00000016086	WDR7 (ENSCARG00000016052)	ENSCARG00000016038	ENSCARG00000016032	ENSCARG00000016023	add1 (ENSCARG00000015820)	ENSCARG00000015804	ENSCARG00000015773	ENSCARG00000015759	ENSCARG00000015755	S1PR3 (ENSCARG00000015753)	ENSCARG00000015749
Goldfish	MODERN SPECIES	2893																ENSCARG00000042817 #22	ENSCARG00000042788
Goldfish	MODERN SPECIES	707																ENSCARG00000040361 #22	ENSCARG00000040356	ENSCARG00000040350	ENSCARG00000040342	ENSCARG00000040330 #22	ENSCARG00000040313 #22	ENSCARG00000040303	ENSCARG00000040294	ENSCARG00000040276	ENSCARG00000038930	oaz1b (ENSCARG00000038828)	ENSCARG00000038801	ENSCARG00000038789
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT01100000263484.B.b.a	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)	DUSP7 (ENSCHAG00000019003)	ENSCHAG00000019015	slc6a1a (ENSCHAG00000019029)	VGLL4 (ENSCHAG00000019262)	syn2a (ENSCHAG00000019267)	ENSCHAG00000019273
Atlantic herring	MODERN SPECIES	20	TPRG1L (ENSCHAG00000022297)	wrap73 (ENSCHAG00000022313)	tp73 (ENSCHAG00000022349)	rer1 (ENSCHAG00000022408) #11	ENSCHAG00000022436	ENSCHAG00000022683	ENSCHAG00000022907	ENSCHAG00000023125	adora1b (ENSCHAG00000023190)	ENSCHAG00000023193	mfn2 (ENSCHAG00000000163)	ENSCHAG00000000245	ENSCHAG00000000287	ENSCHAG00000000291	ENSCHAG00000000297	ENSCHAG00000000318 #22	ENSCHAG00000000327 #22	ENSCHAG00000000833	skia (ENSCHAG00000001665) #7	ENSCHAG00000001765	si:ch211-251b21.1 (ENSCHAG00000001767) #17	plch2a (ENSCHAG00000001857) #14	pex10 (ENSCHAG00000003014) #12	ENSCHAG00000003132	ENSCHAG00000003174	nppal (ENSCHAG00000003202)	si:dkeyp-104h9.5 (ENSCHAG00000003221)	plod1a (ENSCHAG00000003555)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114
Atlantic herring	MODERN SPECIES	20	VGLL4 (ENSCHAG00000019262)	slc6a1a (ENSCHAG00000019029)	ENSCHAG00000019015	DUSP7 (ENSCHAG00000019003)	atp6ap1a (ENSCHAG00000018899)	tafazzin (ENSCHAG00000018782)	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000015183	ENSCHAG00000015148	ENSCHAG00000015142	ENSCHAG00000014973	ENSCHAG00000014958	ENSCHAG00000014926	NTSR1 (ENSCHAG00000014915)	SLCO4A1 (ENSCHAG00000014834)	zgc:110353 (ENSCHAG00000014811)	ENSCHAG00000014806	ENSCHAG00000014800	ENSCHAG00000014768	ENSCHAG00000014648	ENSCHAG00000014616	ENSCHAG00000014609	ENSCHAG00000014558 #22	ENSCHAG00000014538	hsd17b10 (ENSCHAG00000014502)	FAM120C (ENSCHAG00000014277)	IDH3G (ENSCHAG00000013003)	ENSCHAG00000012954	AVPR2 (ENSCHAG00000012945)	sephs3 (ENSCHAG00000012863)	ssr4 (ENSCHAG00000012745)	ikbkg (ENSCHAG00000012691)	cav4b (ENSCHAG00000012685)	ARHGAP4 (ENSCHAG00000012336)	zgc:103759 (ENSCHAG00000012285)	naa10 (ENSCHAG00000011865)	G6PD (ENSCHAG00000009740) ##24	ENSCHAG00000009446
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22
Atlantic herring	MODERN SPECIES	18	aanat1 (ENSCHAG00000015652)	UBE2O (ENSCHAG00000015566)	SPHK1 (ENSCHAG00000015490)	UBE2O (ENSCHAG00000015411)	SPHK1 (ENSCHAG00000015354)	cygb2 (ENSCHAG00000015325)	ENSCHAG00000015299	PRPSAP1 (ENSCHAG00000015256)	PRPSAP1 (ENSCHAG00000015124)	ENSCHAG00000015101	ENSCHAG00000014367	ENSCHAG00000014312	ENSCHAG00000014076	ENSCHAG00000014047	SEC14L1 (ENSCHAG00000013772)	ENSCHAG00000013720 #22	ABAT (ENSCHAG00000013107)	tmem186 (ENSCHAG00000013092)	ENSCHAG00000013035	gde1 (ENSCHAG00000012996)	mcrip2 (ENSCHAG00000012987)	ENSCHAG00000012969	ENSCHAG00000012962	CREBBP (ENSCHAG00000009309)	ADCY9 (ENSCHAG00000009104)	SRL (ENSCHAG00000009094)	TFAP4 (ENSCHAG00000009077)	GLIS2 (ENSCHAG00000009032)	ENSCHAG00000009009	ENSCHAG00000009000	ENSCHAG00000008961
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)	TNFRSF6B (ENSCHAG00000010823)	ENSCHAG00000010817	RTEL1 (ENSCHAG00000008151)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000010817	TNFRSF6B (ENSCHAG00000010823)	zgpat (ENSCHAG00000010827)	dffb (ENSCHAG00000010836)	ENSCHAG00000010860	b3gnt7l (ENSCHAG00000010895)	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000016840	noxa1 (ENSCHAG00000016859)	ENSCHAG00000016877	adrb3a (ENSCHAG00000016998)	npm2a (ENSCHAG00000017006)	got1l1 (ENSCHAG00000017021)	ENSCHAG00000017082	prlhr2a (ENSCHAG00000017087)	ENSCHAG00000017130	ENSCHAG00000017140	adgra2 (ENSCHAG00000017179)	pdlim2 (ENSCHAG00000018351)	sorbs3 (ENSCHAG00000018358)	sytl1 (ENSCHAG00000018364)	zgc:110239 (ENSCHAG00000018378)	ENSCHAG00000018465 #22	ENSCHAG00000018514	ENSCHAG00000018687	mthfd2l (ENSCHAG00000018748)	lipg (ENSCHAG00000018787)	slc20a2 (ENSCHAG00000018853)	ENSCHAG00000018984	ostf1 (ENSCHAG00000019000)	ENSCHAG00000019078	RFESD (ENSCHAG00000019160)	ENSCHAG00000019164	pcsk5b (ENSCHAG00000019210)	rfk (ENSCHAG00000020946)	FOXB2 (ENSCHAG00000020979)	ENSCHAG00000021009	vps13a (ENSCHAG00000021136)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)	DUSP7 (ENSCHAG00000019003)	ENSCHAG00000019015	slc6a1a (ENSCHAG00000019029)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	dffb (ENSCHAG00000010836)	ENSCHAG00000010860	b3gnt7l (ENSCHAG00000010895)	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)	TNFRSF6B (ENSCHAG00000010823)	ENSCHAG00000010817	RTEL1 (ENSCHAG00000008151)	GMEB2 (ENSCHAG00000008027)	pdyn (ENSCHAG00000008018)
Denticle herring	MODERN SPECIES	8	ENSDCDG00000031851	sema3e (ENSDCDG00000031511)	sema3ab (ENSDCDG00000029463)	sema3d (ENSDCDG00000028536)	TMED6 (ENSDCDG00000028493)	TUBA4A (ENSDCDG00000028487)	AMPD3 (ENSDCDG00000026704)	grm3 (ENSDCDG00000026677)	elapor2a (ENSDCDG00000025746)	tmem243a (ENSDCDG00000025691)	fam107b (ENSDCDG00000025688)	ENSDCDG00000025676	frmd4a (ENSDCDG00000025272)	prpf18 (ENSDCDG00000025179)	piwil1 (ENSDCDG00000025171)	ENSDCDG00000025128 #22	BEND7 (ENSDCDG00000025125)	sephs1 (ENSDCDG00000025120)	trabd (ENSDCDG00000025114)	mapk12a (ENSDCDG00000023667)	uri1 (ENSDCDG00000023623)	zgc:112052 (ENSDCDG00000023618)	rxylt1 (ENSDCDG00000023617)	SRGAP1 (ENSDCDG00000019055)	ENSDCDG00000018910	ENSDCDG00000018907	ENSDCDG00000018903	ENSDCDG00000018900	bcl2l13 (ENSDCDG00000018894)	wee2 (ENSDCDG00000018891)	agk (ENSDCDG00000018361)
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT00940000153269.b.a	ENSGT01100000263484.B.b.a	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643
Denticle herring	DUPLICATION
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028834	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600
Denticle herring	MODERN SPECIES	1	ocstamp (ENSDCDG00000028833)	ENSDCDG00000028834	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)
Euteleosteomorpha	ANCESTRAL SPECIES	61	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390
Acanthomorphata	ANCESTRAL SPECIES	136	ENSGT00520000060938	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Euacanthomorphacea	ANCESTRAL SPECIES	73	ENSGT00940000165603	ENSGT00390000016496	ENSGT00390000014490	ENSGT00510000048827	ENSGT00510000048586	ENSGT00390000014794.a	ENSGT00950000183462	ENSGT00940000160122	ENSGT00900000141054	ENSGT01000000214413.b.a.b.b.a	ENSGT00390000013792	ENSGT00520000060938	ENSGT00940000159351	ENSGT00940000161002	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00950000182931.A.a.b	ENSGT01030000234578.B.b.a	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00950000182970.A.b
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151
Cyprinodontoidei	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742
Poeciliinae	DUPLICATION
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.e #22
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.e #22
Guppy	DUPLICATION
Guppy	MODERN SPECIES	459	MYT1 (ENSPREG00000005256)	ENSPREG00000005304	TBC1D22B (ENSPREG00000005317)	snrpg (ENSPREG00000005370)	plpbp (ENSPREG00000005413)	tmed4 (ENSPREG00000005427)	ikbkg (ENSPREG00000005446)	sephs3 (ENSPREG00000005490)	ap4b1 (ENSPREG00000005512)	zgc:101663 (ENSPREG00000005542)	ccnq (ENSPREG00000005567)	atp2b3a (ENSPREG00000005594)	ENSPREG00000005646	ENSPREG00000005650	ENSPREG00000005656	ENSPREG00000005673 #22	ENSPREG00000005714	MRPL49 (ENSPREG00000005735)	ENSPREG00000005751	FLNA (ENSPREG00000005812)	rpl10 (ENSPREG00000006075)	ENSPREG00000006157	renbp (ENSPREG00000006197)	ENSPREG00000006243	dennd2da (ENSPREG00000006264)	stk38a (ENSPREG00000006334)	pex10 (ENSPREG00000006359) #12	plch2a (ENSPREG00000006383) #14	si:ch211-251b21.1 (ENSPREG00000006446) #17	skia (ENSPREG00000006492) #7	prkcz (ENSPREG00000006532)
Guppy	MODERN SPECIES	459	ENSPREG00000020197	tspan31 (ENSPREG00000020212)	agap2 (ENSPREG00000020238)	ZBTB39 (ENSPREG00000020310)	gpr182 (ENSPREG00000020348)	ENSPREG00000020354	igfbp6b (ENSPREG00000020376)	spryd3 (ENSPREG00000020419)	lima1a (ENSPREG00000020431)	slc16a1b (ENSPREG00000020446)	AVPR2 (ENSPREG00000020474)	FAM120C (ENSPREG00000020487)	hsd17b10 (ENSPREG00000020507)	ENSPREG00000020517	ENSPREG00000020527	ENSPREG00000020535 #22	CABLES2 (ENSPREG00000020554)	jph2 (ENSPREG00000020578)	GDAP1L1 (ENSPREG00000020587)	fitm2 (ENSPREG00000020601)	hnf4a (ENSPREG00000020625)	ttpal (ENSPREG00000020647)	pkig (ENSPREG00000020666)	ada (ENSPREG00000020675)	ccn5 (ENSPREG00000020690)	ENSPREG00000020697	ENSPREG00000020704	ENSPREG00000020716	ENSPREG00000020725	ENSPREG00000020733	ENSPREG00000020740
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f #22	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17
Poecilia	ANCESTRAL SPECIES	26	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f #22	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17
Guppy	DUPLICATION
Guppy	MODERN SPECIES	300																ENSPREG00000005179 #22
Guppy	MODERN SPECIES	386																ENSPREG00000006968 #22
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	179	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00970000197642	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f.c #22
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	495	kif3b (ENSPFOG00000015985)	ENSPFOG00000016011	MYT1 (ENSPFOG00000016047)	TBC1D22B (ENSPFOG00000016120)	snrpg (ENSPFOG00000016200)	plpbp (ENSPFOG00000016204)	tmed4 (ENSPFOG00000016236)	ikbkg (ENSPFOG00000016262)	sephs3 (ENSPFOG00000016280)	ap4b1 (ENSPFOG00000016311)	zgc:101663 (ENSPFOG00000016373)	ccnq (ENSPFOG00000016386)	atp2b3b (ENSPFOG00000016422)	ENSPFOG00000020851	las1l (ENSPFOG00000020852)	ENSPFOG00000023779 #22
Amazon molly	MODERN SPECIES	671															ENSPFOG00000002080 #22	ENSPFOG00000024505 #22	MRPL49 (ENSPFOG00000020078)	ENSPFOG00000023117	ENSPFOG00000002069	FLNA (ENSPFOG00000001616)	rpl10 (ENSPFOG00000001344)	ENSPFOG00000001229	renbp (ENSPFOG00000001025)	ENSPFOG00000022079	dennd2da (ENSPFOG00000000852)	stk38a (ENSPFOG00000000692)	pex10 (ENSPFOG00000000648) #12	plch2a (ENSPFOG00000000513) #14	si:ch211-251b21.1 (ENSPFOG00000022127) #17
Sailfin molly	MODERN SPECIES	350							TBC1D10A (ENSPLAG00000017225)	sf3a1 (ENSPLAG00000017268)	CCDC157 (ENSPLAG00000017296)	ENSPLAG00000017318	slc7a4 (ENSPLAG00000017330)	ENSPLAG00000017350	RICTOR (ENSPLAG00000017414)	NPC1L1 (ENSPLAG00000017477)	nono (ENSPLAG00000017492)	ENSPLAG00000017516 #22	ENSPLAG00000017603 #22	ENSPLAG00000000549	MRPL49 (ENSPLAG00000017623)	ENSPLAG00000017631	ENSPLAG00000017642	FLNA (ENSPLAG00000000405)	ENSPLAG00000017689	rpl10 (ENSPLAG00000017727)	ENSPLAG00000017756	renbp (ENSPLAG00000017773)	ENSPLAG00000017788	dennd2da (ENSPLAG00000017799)	stk38a (ENSPLAG00000017852)	pex10 (ENSPLAG00000017861) #12
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.f.d #22
Sailfin molly	MODERN SPECIES	350						TBC1D10A (ENSPLAG00000017225)	sf3a1 (ENSPLAG00000017268)	CCDC157 (ENSPLAG00000017296)	ENSPLAG00000017318	slc7a4 (ENSPLAG00000017330)	ENSPLAG00000017350	RICTOR (ENSPLAG00000017414)	NPC1L1 (ENSPLAG00000017477)	nono (ENSPLAG00000017492)	ENSPLAG00000017516 #22	ENSPLAG00000017603 #22	ENSPLAG00000000549	MRPL49 (ENSPLAG00000017623)	ENSPLAG00000017631	ENSPLAG00000017642	FLNA (ENSPLAG00000000405)	ENSPLAG00000017689	rpl10 (ENSPLAG00000017727)	ENSPLAG00000017756	renbp (ENSPLAG00000017773)	ENSPLAG00000017788	dennd2da (ENSPLAG00000017799)	stk38a (ENSPLAG00000017852)	pex10 (ENSPLAG00000017861) #12
Amazon molly	MODERN SPECIES	671		si:ch211-251b21.1 (ENSPFOG00000022127) #17	plch2a (ENSPFOG00000000513) #14	pex10 (ENSPFOG00000000648) #12	stk38a (ENSPFOG00000000692)	dennd2da (ENSPFOG00000000852)	ENSPFOG00000022079	renbp (ENSPFOG00000001025)	ENSPFOG00000001229	rpl10 (ENSPFOG00000001344)	FLNA (ENSPFOG00000001616)	ENSPFOG00000002069	ENSPFOG00000023117	MRPL49 (ENSPFOG00000020078)	ENSPFOG00000024505 #22	ENSPFOG00000002080 #22
Platyfish	DUPLICATION
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES		MAPK13 (ENSXMAG00000012699)	ENSXMAG00000024569	ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14
Platyfish	MODERN SPECIES		ENSXMAG00000027801	TBC1D22B (ENSXMAG00000004320)	ENSXMAG00000028023	snrpg (ENSXMAG00000004353)	plpbp (ENSXMAG00000004354)	tmed4 (ENSXMAG00000004360)	ikbkg (ENSXMAG00000004368)	sephs3 (ENSXMAG00000029983)	ap4b1 (ENSXMAG00000004378)	zgc:101663 (ENSXMAG00000027802)	ENSXMAG00000022842	ccnq (ENSXMAG00000004404)	atp2b3b (ENSXMAG00000004407)	ENSXMAG00000013649	ENSXMAG00000023987	ENSXMAG00000025516 #22	tpk2 (ENSXMAG00000023034)	ENSXMAG00000004466	tpx2 (ENSXMAG00000004475)	plod1a (ENSXMAG00000004495)	si:dkeyp-104h9.5 (ENSXMAG00000004560)	phc2a (ENSXMAG00000004561)	ENSXMAG00000027747	rcc2 (ENSXMAG00000004563)	rpl22 (ENSXMAG00000004585)	icmt (ENSXMAG00000021941)	rtel1 (ENSXMAG00000004603)	mfn2 (ENSXMAG00000004637)	ENSXMAG00000019757	ENSXMAG00000024079	asxl1 (ENSXMAG00000013501)
Platyfish	DUPLICATION
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES		kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)	dennd2da (ENSXMAG00000004839)
Platyfish	MODERN SPECIES		ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)
Platyfish	MODERN SPECIES		ENSXMAG00000024569	ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12
NAME_4	DUPLICATION
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.g #22
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	1119															NELL1 (ENSCVAG00000000704)	ENSCVAG00000007572 #22	ENSCVAG00000007587 #22
Sheepshead minnow	MODERN SPECIES	927			SETBP1 (ENSCVAG00000013210)	cdk7 (ENSCVAG00000013203)	serinc5 (ENSCVAG00000013177)	thbs4a (ENSCVAG00000013167)	mtx3 (ENSCVAG00000013083)	cmya5 (ENSCVAG00000013047)	tent2 (ENSCVAG00000013041)	homer1b (ENSCVAG00000013030)	JMY (ENSCVAG00000012999)	ENSCVAG00000012983	dimt1l (ENSCVAG00000012978)	kif2a (ENSCVAG00000012908)	unc45b (ENSCVAG00000012719)	ENSCVAG00000012661 #22	ENSCVAG00000012638	ENSCVAG00000012620
Mummichog	MODERN SPECIES	2240	afg1lb (ENSFHEG00000023340)	foxo3b (ENSFHEG00000023338)	ARMC2 (ENSFHEG00000023335)	sesn1 (ENSFHEG00000023330)	cep57l1 (ENSFHEG00000023326)	cd164 (ENSFHEG00000023325)	ppil6 (ENSFHEG00000023323)	ENSFHEG00000023320	ENSFHEG00000023319	msgn1 (ENSFHEG00000023318)	si:ch211-51e12.7 (ENSFHEG00000023316)	mrps10 (ENSFHEG00000023314)	tulp4a (ENSFHEG00000023310)	tmem181 (ENSFHEG00000023306)	DYNLT1 (ENSFHEG00000023303)	ENSFHEG00000023302 #22	gtf2h5 (ENSFHEG00000023300)	serac1 (ENSFHEG00000023298)	myct1a (ENSFHEG00000023295)	ENSFHEG00000023287	ENSFHEG00000023281	SYNE1 (ENSFHEG00000023274)	esr1 (ENSFHEG00000000933)	armt1 (ENSFHEG00000000949)	zbtb2b (ENSFHEG00000000951)	akap12b (ENSFHEG00000000954)	mthfd1l (ENSFHEG00000000959)	stx11b.2 (ENSFHEG00000000962)	STX11 (ENSFHEG00000000963)	UTRN (ENSFHEG00000000967)	ENSFHEG00000000980
NAME_4	ANCESTRAL SPECIES	454																ENSGT00950000183126.a.p.a.h #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	907					ENSCVAG00000021852	ENSCVAG00000000556	tubb2b (ENSCVAG00000021868)	ENSCVAG00000021885	FKBP15 (ENSCVAG00000021919)	fgf17 (ENSCVAG00000021931)	entpd2a.1 (ENSCVAG00000000561)	nelfb (ENSCVAG00000021970)	ENSCVAG00000021986	arrdc1a (ENSCVAG00000021997)	ehmt1a (ENSCVAG00000022013)	ENSCVAG00000022029 #22	ENSCVAG00000022060 #22
Sheepshead minnow	MODERN SPECIES	1749																ENSCVAG00000012788 #22	ENSCVAG00000012768 #22
Sheepshead minnow	MODERN SPECIES	1749															ENSCVAG00000012788 #22	ENSCVAG00000012768 #22
Aplocheiloidei	ANCESTRAL SPECIES	60	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000003937	ENSGT00390000017253	ENSGT00390000014785	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284
Mangrove rivulus	DUPLICATION
Mangrove rivulus	DUPLICATION
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	1448																ENSKMAG00000001992 #22
Mangrove rivulus	MODERN SPECIES	1624																ENSKMAG00000008410 #22
Mangrove rivulus	MODERN SPECIES	627															ENSKMAG00000010683	ENSKMAG00000010658 #22	ENSKMAG00000010636 #22	prkcz (ENSKMAG00000010610)
Mangrove rivulus	MODERN SPECIES	1247																ENSKMAG00000008441 #22
Turquoise killifish	MODERN SPECIES	1624	AP4B1 (ENSNFUG00015009549)	zgc:101663 (ENSNFUG00015009535)	C23H1ORF192 (ENSNFUG00015009521)	ccnq (ENSNFUG00015009510)	atp2b3a (ENSNFUG00015009145)	ENSNFUG00015008985	ENSNFUG00015008976	BX248510.1 (ENSNFUG00015008960)	HAUS7 (ENSNFUG00015008930)	ENSNFUG00015008904	ENSNFUG00015008882	ENSNFUG00015008357	RPL10 (ENSNFUG00015008333)	ENSNFUG00015008321	ENSNFUG00015008308	zgc:153759 (ENSNFUG00015008302) #22	ENSNFUG00015008286	ENSNFUG00015008276	ENSNFUG00015008275	prkcz (ENSNFUG00015008150)	SKIA (ENSNFUG00015008099) #7	si:ch211-251b21.1 (ENSNFUG00015008082) #17	plch2a (ENSNFUG00015007480) #14	pex10 (ENSNFUG00015007385) #12	DENND2DA (ENSNFUG00015007318)	ENSNFUG00015007305	renbp (ENSNFUG00015007140)	ENSNFUG00015007129	RTEL1 (ENSNFUG00015007055)	icmt (ENSNFUG00015007044)	rpl22 (ENSNFUG00015007034)
Oryzias	ANCESTRAL SPECIES	45	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078
Oryzias_b	ANCESTRAL SPECIES	48	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	616																ENSOMEG00000011646 #22	ENSOMEG00000011630 #22	prkcz (ENSOMEG00000011568)	ENSOMEG00000011369	ENSOMEG00000011361 #7	ENSOMEG00000011344
Indian medaka	MODERN SPECIES	722																ENSOMEG00000013346 #22	ENSOMEG00000013278	ENSOMEG00000000332
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	21	bcap31 (ENSOJAG00000001315)	ptpn18 (ENSOJAG00000001129)	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)
Javanese ricefish	MODERN SPECIES	21	ptpn18 (ENSOJAG00000001129)	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)	LRRC38 (ENSOJAG00000010413)
Oryzias_a	ANCESTRAL SPECIES	54	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Japanese Medaka HdrR	MODERN SPECIES	21	gripap1 (ENSORLG00000018356)	kcnd1 (ENSORLG00000018330)	ENSORLG00000018299	mfn2 (ENSORLG00000025366)	ENSORLG00000023957	ENSORLG00000026958	dedd (ENSORLG00000024196)	tnnc1b (ENSORLG00000019408)	ENSORLG00000027984	nppal (ENSORLG00000025996)	nppb (ENSORLG00000027335)	ENSORLG00000024366	ENSORLG00000027273	ENSORLG00000009359	igsf21b (ENSORLG00000016826)	ENSORLG00000016829 #22	ENSORLG00000024029 #22	prkcz (ENSORLG00000016850)	ENSORLG00000024678	skia (ENSORLG00000016855) #7	ENSORLG00000022931	si:ch211-251b21.1 (ENSORLG00000016860) #17	ENSORLG00000028134	plch2a (ENSORLG00000016877) #14	ENSORLG00000029302	pex10 (ENSORLG00000016884) #12	ENSORLG00000016889	renbp (ENSORLG00000016904)	ENSORLG00000027554	ENSORLG00000016906	dennd2da (ENSORLG00000020542)
Chinese medaka	MODERN SPECIES	49									ENSOSIG00000000580	KCNAB2 (ENSOSIG00000000572)	dedd (ENSOSIG00000000567)	tnnc1b (ENSOSIG00000000566)	nppal (ENSOSIG00000000565)	ENSOSIG00000000563	igsf21b (ENSOSIG00000000066)	ENSOSIG00000000054 #22	ENSOSIG00000015359 #22	prkcz (ENSOSIG00000015178)	ENSOSIG00000015177	skia (ENSOSIG00000015175) #7	plch2a (ENSOSIG00000015125) #14	ENSOSIG00000015112	renbp (ENSOSIG00000015062)	ENSOSIG00000015060	ENSOSIG00000015058	dennd2da (ENSOSIG00000015057)	stk38a (ENSOSIG00000015049)	ENSOSIG00000015046	ENSOSIG00000015044
Ovalentaria_B	ANCESTRAL SPECIES	2					ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275	ENSGT00940000156607.a.b
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.r	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B
P. nyererei	MODERN SPECIES	304	ENSPNYG00000001489	ENSPNYG00000001380	glb1l (ENSPNYG00000001327)	ANKZF1 (ENSPNYG00000001310)	ENSPNYG00000001277	ENSPNYG00000001248	tra2b (ENSPNYG00000001238)	igf2bp2a (ENSPNYG00000001187)	ENSPNYG00000001166	ehhadh (ENSPNYG00000001157)	zgc:162707 (ENSPNYG00000001153)	nme9 (ENSPNYG00000001110)	ENSPNYG00000001099	SMARCAL1 (ENSPNYG00000001058)	MARCHF4 (ENSPNYG00000000999)	ENSPNYG00000000972 #22	ENSPNYG00000000965 #22	ENSPNYG00000000944	ENSPNYG00000000925	xrcc5 (ENSPNYG00000000911)	TMEM169 (ENSPNYG00000000898)	PFKL (ENSPNYG00000000802)	MAP3K13 (ENSPNYG00000000790)	trpm2 (ENSPNYG00000000679)	hycc2 (ENSPNYG00000019965)	ENSPNYG00000019883	DIP2A (ENSPNYG00000019802)	ENSPNYG00000019776	ENSPNYG00000019740	ENSPNYG00000019701	ENSPNYG00000019666
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00950000182895.a.b.v.k	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000160683
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005007958	ENSMZEG00005007928	glb1l (ENSMZEG00005007880)	ANKZF1 (ENSMZEG00005007906)	ENSMZEG00005007865	ENSMZEG00005007848	tra2b (ENSMZEG00005007817)	igf2bp2a (ENSMZEG00005007777)	tmem41aa (ENSMZEG00005007760)	ehhadh (ENSMZEG00005007744)	zgc:162707 (ENSMZEG00005007724)	nme9 (ENSMZEG00005007697)	ENSMZEG00005007691	SMARCAL1 (ENSMZEG00005007660)	MARCHF4 (ENSMZEG00005007652)	ENSMZEG00005007645 #22	ENSMZEG00005007629 #22	ENSMZEG00005007621	ENSMZEG00005007607	xrcc5 (ENSMZEG00005007591)	TMEM169 (ENSMZEG00005007585)	TANC1 (ENSMZEG00005007557)	WDSUB1 (ENSMZEG00005007538)	ENSMZEG00005007519	BAZ2B (ENSMZEG00005007380)	CD302 (ENSMZEG00005007347)	RBMS1 (ENSMZEG00005007313)	tank (ENSMZEG00005007292)	tbr1b (ENSMZEG00005007278)	SLC4A10 (ENSMZEG00005007236)	gcgb (ENSMZEG00005007228)
Eastern happy	MODERN SPECIES	7	ENSACLG00000015115	ENSACLG00000015141	glb1l (ENSACLG00000015236)	ANKZF1 (ENSACLG00000015301)	ENSACLG00000015369	ENSACLG00000015432	tra2b (ENSACLG00000015461)	igf2bp2a (ENSACLG00000015512)	tmem41aa (ENSACLG00000015796)	ehhadh (ENSACLG00000015819)	zgc:162707 (ENSACLG00000015853)	nme9 (ENSACLG00000015875)	SMARCAL1 (ENSACLG00000015990)	MARCHF4 (ENSACLG00000016071)	ENSACLG00000016093 #22	ENSACLG00000016169 #22	COL6A2 (ENSACLG00000016186)	xrcc5 (ENSACLG00000016331)	TMEM169 (ENSACLG00000016388)	PFKL (ENSACLG00000016404)	MAP3K13 (ENSACLG00000016481)	trpm2 (ENSACLG00000016644)	hycc2 (ENSACLG00000016763)	ENSACLG00000016906	DIP2A (ENSACLG00000016955)	ENSACLG00000017309	ENSACLG00000017318	ENSACLG00000017330	ENSACLG00000017436	prmt2 (ENSACLG00000017462)	ENSACLG00000017480
Lyretail cichlid	MODERN SPECIES	303	ENSNBRG00000015910	glb1l (ENSNBRG00000015985)	ENSNBRG00000016017	ENSNBRG00000016024	ENSNBRG00000016037	ENSNBRG00000016058	tra2b (ENSNBRG00000016092)	igf2bp2a (ENSNBRG00000016140)	tmem41aa (ENSNBRG00000016175)	ehhadh (ENSNBRG00000016194)	zgc:162707 (ENSNBRG00000016203)	nme9 (ENSNBRG00000016220)	ENSNBRG00000016254	SMARCAL1 (ENSNBRG00000016273)	MARCHF4 (ENSNBRG00000016380)	ENSNBRG00000016401 #22	COL6A2 (ENSNBRG00000016418)	xrcc5 (ENSNBRG00000016487)	TMEM169 (ENSNBRG00000016609)	PFKL (ENSNBRG00000016638)	MAP3K13 (ENSNBRG00000016703)	ENSNBRG00000016764	trpm2 (ENSNBRG00000016802)	ENSNBRG00000016863	hycc2 (ENSNBRG00000017132)	ENSNBRG00000017163	DIP2A (ENSNBRG00000017189)	ENSNBRG00000017248	ENSNBRG00000017262	prmt2 (ENSNBRG00000017273)	ercc1 (ENSNBRG00000017310)
Nile tilapia	MODERN SPECIES	7	pttg1ipb (ENSONIG00000008999)	ENSONIG00000009002	glb1l (ENSONIG00000009015)	ANKZF1 (ENSONIG00000009018)	ENSONIG00000009020	ENSONIG00000009023	tra2b (ENSONIG00000009025)	igf2bp2a (ENSONIG00000009029)	tmem41aa (ENSONIG00000040431)	ehhadh (ENSONIG00000036880)	zgc:162707 (ENSONIG00000029797)	nme9 (ENSONIG00000009034)	SMARCAL1 (ENSONIG00000009036)	MARCHF4 (ENSONIG00000009038)	ENSONIG00000036866	ENSONIG00000034118 #22	ENSONIG00000009040 #22	COL6A2 (ENSONIG00000009044)	xrcc5 (ENSONIG00000009057)	tmem169 (ENSONIG00000036428)	PFKL (ENSONIG00000009075)	MAP3K13 (ENSONIG00000009084)	trpm2 (ENSONIG00000009086)	fam126b (ENSONIG00000031870)	ENSONIG00000009095	ENSONIG00000032971	DIP2A (ENSONIG00000009096)	ENSONIG00000040443	ENSONIG00000037894	ENSONIG00000036478	prmt2 (ENSONIG00000004127)
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.r	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Burton s mouthbrooder	MODERN SPECIES	292	sumo3b (ENSHBUG00000003354)	ENSHBUG00000003346	ENSHBUG00000003332	glb1l (ENSHBUG00000003243)	ANKZF1 (ENSHBUG00000003208)	ENSHBUG00000003190	ENSHBUG00000003161	tra2b (ENSHBUG00000003145)	igf2bp2a (ENSHBUG00000003126)	tmem41aa (ENSHBUG00000003047)	ehhadh (ENSHBUG00000003028)	zgc:162707 (ENSHBUG00000003020)	nme9 (ENSHBUG00000003004)	SMARCAL1 (ENSHBUG00000002973)	MARCHF4 (ENSHBUG00000000068)	ENSHBUG00000002949 #22	COL6A2 (ENSHBUG00000002922)	xrcc5 (ENSHBUG00000002906)	TMEM169 (ENSHBUG00000002883)	PFKL (ENSHBUG00000002877)	MAP3K13 (ENSHBUG00000002814)	trpm2 (ENSHBUG00000002764)	hycc2 (ENSHBUG00000001171)	ENSHBUG00000001010	DIP2A (ENSHBUG00000002696)	ENSHBUG00000002573	ENSHBUG00000002551	ENSHBUG00000002524	prmt2 (ENSHBUG00000002521)	ercc1 (ENSHBUG00000002515)	ENSHBUG00000002501
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
P. nyererei	MODERN SPECIES	304	ENSPNYG00000001380	glb1l (ENSPNYG00000001327)	ANKZF1 (ENSPNYG00000001310)	ENSPNYG00000001277	ENSPNYG00000001248	tra2b (ENSPNYG00000001238)	igf2bp2a (ENSPNYG00000001187)	ENSPNYG00000001166	ehhadh (ENSPNYG00000001157)	zgc:162707 (ENSPNYG00000001153)	nme9 (ENSPNYG00000001110)	ENSPNYG00000001099	SMARCAL1 (ENSPNYG00000001058)	MARCHF4 (ENSPNYG00000000999)	ENSPNYG00000000972 #22	ENSPNYG00000000965 #22	ENSPNYG00000000944	ENSPNYG00000000925	xrcc5 (ENSPNYG00000000911)	TMEM169 (ENSPNYG00000000898)	PFKL (ENSPNYG00000000802)	MAP3K13 (ENSPNYG00000000790)	trpm2 (ENSPNYG00000000679)	hycc2 (ENSPNYG00000019965)	ENSPNYG00000019883	DIP2A (ENSPNYG00000019802)	ENSPNYG00000019776	ENSPNYG00000019740	ENSPNYG00000019701	ENSPNYG00000019666	ENSPNYG00000019648
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000160683	ENSGT00940000165332.B
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005007928	glb1l (ENSMZEG00005007880)	ANKZF1 (ENSMZEG00005007906)	ENSMZEG00005007865	ENSMZEG00005007848	tra2b (ENSMZEG00005007817)	igf2bp2a (ENSMZEG00005007777)	tmem41aa (ENSMZEG00005007760)	ehhadh (ENSMZEG00005007744)	zgc:162707 (ENSMZEG00005007724)	nme9 (ENSMZEG00005007697)	ENSMZEG00005007691	SMARCAL1 (ENSMZEG00005007660)	MARCHF4 (ENSMZEG00005007652)	ENSMZEG00005007645 #22	ENSMZEG00005007629 #22	ENSMZEG00005007621	ENSMZEG00005007607	xrcc5 (ENSMZEG00005007591)	TMEM169 (ENSMZEG00005007585)	TANC1 (ENSMZEG00005007557)	WDSUB1 (ENSMZEG00005007538)	ENSMZEG00005007519	BAZ2B (ENSMZEG00005007380)	CD302 (ENSMZEG00005007347)	RBMS1 (ENSMZEG00005007313)	tank (ENSMZEG00005007292)	tbr1b (ENSMZEG00005007278)	SLC4A10 (ENSMZEG00005007236)	gcgb (ENSMZEG00005007228)	ENSMZEG00005007202
Zebra mbuna	MODERN SPECIES	1007																ENSMZEG00005025041 #22	ENSMZEG00005025039
Eastern happy	MODERN SPECIES	7	ENSACLG00000015103	ENSACLG00000015115	ENSACLG00000015141	glb1l (ENSACLG00000015236)	ANKZF1 (ENSACLG00000015301)	ENSACLG00000015369	ENSACLG00000015432	tra2b (ENSACLG00000015461)	igf2bp2a (ENSACLG00000015512)	tmem41aa (ENSACLG00000015796)	ehhadh (ENSACLG00000015819)	zgc:162707 (ENSACLG00000015853)	nme9 (ENSACLG00000015875)	SMARCAL1 (ENSACLG00000015990)	MARCHF4 (ENSACLG00000016071)	ENSACLG00000016093 #22	ENSACLG00000016169 #22	COL6A2 (ENSACLG00000016186)	xrcc5 (ENSACLG00000016331)	TMEM169 (ENSACLG00000016388)	PFKL (ENSACLG00000016404)	MAP3K13 (ENSACLG00000016481)	trpm2 (ENSACLG00000016644)	hycc2 (ENSACLG00000016763)	ENSACLG00000016906	DIP2A (ENSACLG00000016955)	ENSACLG00000017309	ENSACLG00000017318	ENSACLG00000017330	ENSACLG00000017436	prmt2 (ENSACLG00000017462)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000009002	glb1l (ENSONIG00000009015)	ANKZF1 (ENSONIG00000009018)	ENSONIG00000009020	ENSONIG00000009023	tra2b (ENSONIG00000009025)	igf2bp2a (ENSONIG00000009029)	tmem41aa (ENSONIG00000040431)	ehhadh (ENSONIG00000036880)	zgc:162707 (ENSONIG00000029797)	nme9 (ENSONIG00000009034)	SMARCAL1 (ENSONIG00000009036)	MARCHF4 (ENSONIG00000009038)	ENSONIG00000036866	ENSONIG00000034118 #22	ENSONIG00000009040 #22	COL6A2 (ENSONIG00000009044)	xrcc5 (ENSONIG00000009057)	tmem169 (ENSONIG00000036428)	PFKL (ENSONIG00000009075)	MAP3K13 (ENSONIG00000009084)	trpm2 (ENSONIG00000009086)	fam126b (ENSONIG00000031870)	ENSONIG00000009095	ENSONIG00000032971	DIP2A (ENSONIG00000009096)	ENSONIG00000040443	ENSONIG00000037894	ENSONIG00000036478	prmt2 (ENSONIG00000004127)	ercc1 (ENSONIG00000004132)
Midas cichlid	MODERN SPECIES	1312	ENSACIG00000000950	ENSACIG00000000965	glb1l (ENSACIG00000001086)	ANKZF1 (ENSACIG00000001142)	ENSACIG00000001218	ENSACIG00000001261	tra2b (ENSACIG00000001289)	igf2bp2a (ENSACIG00000001308)	tmem41aa (ENSACIG00000001348)	ehhadh (ENSACIG00000001368)	zgc:162707 (ENSACIG00000001437)	nme9 (ENSACIG00000001452)	ENSACIG00000001490	SMARCAL1 (ENSACIG00000001500)	MARCHF4 (ENSACIG00000001550)	ENSACIG00000001602 #22	ENSACIG00000001629	ENSACIG00000001656	xrcc5 (ENSACIG00000001685)	TMEM169 (ENSACIG00000001883)	PFKL (ENSACIG00000001893)	MAP3K13 (ENSACIG00000001962)	ENSACIG00000002000	ENSACIG00000002037	hycc2 (ENSACIG00000002107)	ENSACIG00000002126	DIP2A (ENSACIG00000002167)
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p #22
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a #22
Nile tilapia	MODERN SPECIES	14	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743	ENSONIG00000019178	ENSONIG00000037554
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a #22
Haplochromini	DUPLICATION
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000178684	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22
Burton s mouthbrooder	MODERN SPECIES	1287															ENSHBUG00000004296 #22	ENSHBUG00000004315 #22
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
P. nyererei	MODERN SPECIES	517								ENSPNYG00000011786	ENSPNYG00000011795	ect2 (ENSPNYG00000011865)	b3gnt5a (ENSPNYG00000012144)	rfc4 (ENSPNYG00000012167)	ENSPNYG00000012238	ENSPNYG00000012280	ENSPNYG00000012285 #22	ENSPNYG00000012311 #22	ENSPNYG00000012335	ENSPNYG00000012372	ENSPNYG00000012391	ENSPNYG00000012438	ENSPNYG00000012458	ENSPNYG00000012506	ENSPNYG00000012547
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
Zebra mbuna	MODERN SPECIES	695															ENSMZEG00005025694 #22	ENSMZEG00005025695 #22
Eastern happy	MODERN SPECIES	14	ENSACLG00000027119	ENSACLG00000027141	NAALADL2 (ENSACLG00000027187)	ENSACLG00000027197	ENSACLG00000027252	nlgn1 (ENSACLG00000000999)	ENSACLG00000001096	ENSACLG00000001206	ect2 (ENSACLG00000001221)	ENSACLG00000001304	b3gnt5a (ENSACLG00000001344)	rfc4 (ENSACLG00000001349)	ENSACLG00000001397	ENSACLG00000001417	ENSACLG00000001432 #22	ENSACLG00000001494 #22	ENSACLG00000001533	ENSACLG00000001546	ENSACLG00000001610	ENSACLG00000001625	ENSACLG00000001664	ENSACLG00000001685	ENSACLG00000001726	ENSACLG00000001729	fzd7a (ENSACLG00000002099)	cdk15 (ENSACLG00000002120)	ftcd (ENSACLG00000002191)	ENSACLG00000002248	ENSACLG00000002266	ENSACLG00000002292	abi3bpb (ENSACLG00000002308)
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1105	XDH (ENSMZEG00005012009)	tspan7b (ENSMZEG00005011993)	mid1ip1b (ENSMZEG00005011984)	bcor (ENSMZEG00005011975)	FAIM (ENSMZEG00005011968)	ralbb (ENSMZEG00005011961)	INHBB (ENSMZEG00005011953)	gli2b (ENSMZEG00005011934)	ENSMZEG00005011924	ENSMZEG00005011919	ENSMZEG00005011900	ENSMZEG00005011892	ENSMZEG00005011876	ENSMZEG00005011870	ENSMZEG00005011839	ENSMZEG00005011819 #22	ENSMZEG00005011665 #22	ENSMZEG00005011644	ENSMZEG00005011636	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257
Zebra mbuna	MODERN SPECIES	1105	tspan7b (ENSMZEG00005011993)	mid1ip1b (ENSMZEG00005011984)	bcor (ENSMZEG00005011975)	FAIM (ENSMZEG00005011968)	ralbb (ENSMZEG00005011961)	INHBB (ENSMZEG00005011953)	gli2b (ENSMZEG00005011934)	ENSMZEG00005011924	ENSMZEG00005011919	ENSMZEG00005011900	ENSMZEG00005011892	ENSMZEG00005011876	ENSMZEG00005011870	ENSMZEG00005011839	ENSMZEG00005011819 #22	ENSMZEG00005011665 #22	ENSMZEG00005011644	ENSMZEG00005011636	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257	rfc4 (ENSMZEG00005011212)
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.b #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.b #22
Lyretail cichlid	MODERN SPECIES	376			ENSNBRG00000011334	ENSNBRG00000011343	ENSNBRG00000011360	ENSNBRG00000011412	ENSNBRG00000011440	NAALADL2 (ENSNBRG00000011456)	ENSNBRG00000011508	nlgn1 (ENSNBRG00000011573)	ect2 (ENSNBRG00000011603)	ENSNBRG00000011659	b3gnt5a (ENSNBRG00000011825)	ENSNBRG00000011833	rfc4 (ENSNBRG00000011864)	ENSNBRG00000011949 #22	ENSNBRG00000011989	ENSNBRG00000012010	ENSNBRG00000012019	ENSNBRG00000012040	ENSNBRG00000012084	ENSNBRG00000012090	ENSNBRG00000012124	ENSNBRG00000012248	ENSNBRG00000012263	ENSNBRG00000012280	ENSNBRG00000012349	ENSNBRG00000012361	ENSNBRG00000012374	fzd7a (ENSNBRG00000012390)	cdk15 (ENSNBRG00000012405)
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000161304.a.a	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000178684	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22
Burton s mouthbrooder	MODERN SPECIES	1287																ENSHBUG00000004296 #22	ENSHBUG00000004315 #22
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
P. nyererei	MODERN SPECIES	517									ENSPNYG00000011786	ENSPNYG00000011795	ect2 (ENSPNYG00000011865)	b3gnt5a (ENSPNYG00000012144)	rfc4 (ENSPNYG00000012167)	ENSPNYG00000012238	ENSPNYG00000012280	ENSPNYG00000012285 #22	ENSPNYG00000012311 #22	ENSPNYG00000012335	ENSPNYG00000012372	ENSPNYG00000012391	ENSPNYG00000012438	ENSPNYG00000012458	ENSPNYG00000012506	ENSPNYG00000012547
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000161304.a.a	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
Eastern happy	MODERN SPECIES	14	MEP1B (ENSACLG00000027103)	ENSACLG00000027119	ENSACLG00000027141	NAALADL2 (ENSACLG00000027187)	ENSACLG00000027197	ENSACLG00000027252	nlgn1 (ENSACLG00000000999)	ENSACLG00000001096	ENSACLG00000001206	ect2 (ENSACLG00000001221)	ENSACLG00000001304	b3gnt5a (ENSACLG00000001344)	rfc4 (ENSACLG00000001349)	ENSACLG00000001397	ENSACLG00000001417	ENSACLG00000001432 #22	ENSACLG00000001494 #22	ENSACLG00000001533	ENSACLG00000001546	ENSACLG00000001610	ENSACLG00000001625	ENSACLG00000001664	ENSACLG00000001685	ENSACLG00000001726	ENSACLG00000001729	fzd7a (ENSACLG00000002099)	cdk15 (ENSACLG00000002120)	ftcd (ENSACLG00000002191)	ENSACLG00000002248	ENSACLG00000002266	ENSACLG00000002292
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	695																ENSMZEG00005025694 #22	ENSMZEG00005025695 #22
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257	rfc4 (ENSMZEG00005011212)	ENSMZEG00005011201	ENSMZEG00005011195	ENSMZEG00005011187 #22	ENSMZEG00005011174	uhmk1 (ENSMZEG00005011160)	akr1a1b (ENSMZEG00005011146)	ENSMZEG00005011137	SHISAL2A (ENSMZEG00005011101)	ENSMZEG00005011087	slc1a7b (ENSMZEG00005011061)	ENSMZEG00005011029	PODN (ENSMZEG00005010982)	scp2b (ENSMZEG00005010972)	cpt2 (ENSMZEG00005010955)	magoh (ENSMZEG00005010964)	aatf (ENSMZEG00005010945)	ENSMZEG00005010941	uck2a (ENSMZEG00005010927)
Nile tilapia	MODERN SPECIES	14	akr1a1b (ENSONIG00000019210)	uhmk1 (ENSONIG00000019209)	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.b #22
Nile tilapia	MODERN SPECIES	14	uhmk1 (ENSONIG00000019209)	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743	ENSONIG00000019178
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	521															ENSACIG00000005521 #22	ENSACIG00000005541 #22	ENSACIG00000005559 #22
Midas cichlid	MODERN SPECIES	137												ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	MODERN SPECIES	137															ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	MODERN SPECIES	137														ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	841																ENSACIG00000021370 #22
Midas cichlid	MODERN SPECIES	1668																ENSACIG00000005037 #22
Midas cichlid	MODERN SPECIES	1656																ENSACIG00000004921 #22
Midas cichlid	MODERN SPECIES	521														ENSACIG00000005521 #22	ENSACIG00000005541 #22	ENSACIG00000005559 #22
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	137												ENSACIG00000011355 #22	ENSACIG00000011372 #22	ENSACIG00000011388 #22	ENSACIG00000011398 #22	ENSACIG00000011433 #22
Midas cichlid	MODERN SPECIES	521														ENSACIG00000005559 #22	ENSACIG00000005541 #22	ENSACIG00000005521 #22
Midas cichlid	MODERN SPECIES	137													ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Pomacentridae	ANCESTRAL SPECIES	91																ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Pomacentridae_A	DUPLICATION
Pomacentridae_A	DUPLICATION
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.q.a #22
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00940000155808	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT01040000240451.a.b.a	ENSGT00940000155330.b	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c.k.a	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.b	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b	ENSGT00950000183126.a.p.a.q.b #22	ENSGT00950000183126.a.p.a.q.a #22
Orange clownfish	MODERN SPECIES	22	kansl2 (ENSAPEG00000016543)	ENSAPEG00000016486	TMBIM6 (ENSAPEG00000016442)	ctdsp2 (ENSAPEG00000016417)	SLC11A2 (ENSAPEG00000016358)	MARCHF9 (ENSAPEG00000016342)	tspan31 (ENSAPEG00000016316)	agap2 (ENSAPEG00000016168)	ENSAPEG00000016120	gpr182 (ENSAPEG00000016114)	ENSAPEG00000016063	igfbp6b (ENSAPEG00000016029)	spryd3 (ENSAPEG00000015977)	lima1a (ENSAPEG00000015952)	ENSAPEG00000015936 #22	ENSAPEG00000015918 #22	ENSAPEG00000015819	osbpl2b (ENSAPEG00000015765)	BSN (ENSAPEG00000015660)	ENSAPEG00000015637	tmem115 (ENSAPEG00000015629)	ENSAPEG00000015619	sema3h (ENSAPEG00000015575)	ENSAPEG00000015560	borcs6 (ENSAPEG00000015544)	si:dkey-72l14.3 (ENSAPEG00000015532)	xpc (ENSAPEG00000015503)	ENSAPEG00000015494	arih2 (ENSAPEG00000015440)	impdh2 (ENSAPEG00000015339)	dalrd3 (ENSAPEG00000015102)
Clown anemonefish	MODERN SPECIES	2911															ENSAOCG00000009581 #22	ENSAOCG00000009632 #22
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	3714																ENSAPOG00000020898 #22
Spiny chromis	MODERN SPECIES	3431																ENSAPOG00000013675 #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.q.b #22
Amphiprion	ANCESTRAL SPECIES	75															ENSGT00950000183126.a.p.a.q.a #22	ENSGT00950000183126.a.p.a.q.b #22	ENSGT00940000158313.a.b	ENSGT00940000158675.a	ENSGT00940000160528.b	ENSGT00940000156890.a.b	ENSGT00940000154307.D	ENSGT00940000160722	ENSGT00940000158956.c.k.a	ENSGT00940000160351	ENSGT00940000158208.a.a	ENSGT00940000155330.b	ENSGT01040000240451.a.b.a	ENSGT01050000244940.a.a	ENSGT00530000063607.a	ENSGT00940000155808	ENSGT00940000159544
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	1961																ENSAOCG00000007054 #22	ENSAOCG00000006996
Clown anemonefish	MODERN SPECIES	2911															ENSAOCG00000009632 #22	ENSAOCG00000009581 #22
Orange clownfish	MODERN SPECIES	22	impdh2 (ENSAPEG00000015339)	arih2 (ENSAPEG00000015440)	ENSAPEG00000015494	xpc (ENSAPEG00000015503)	si:dkey-72l14.3 (ENSAPEG00000015532)	borcs6 (ENSAPEG00000015544)	ENSAPEG00000015560	sema3h (ENSAPEG00000015575)	ENSAPEG00000015619	tmem115 (ENSAPEG00000015629)	ENSAPEG00000015637	BSN (ENSAPEG00000015660)	osbpl2b (ENSAPEG00000015765)	ENSAPEG00000015819	ENSAPEG00000015918 #22	ENSAPEG00000015936 #22	lima1a (ENSAPEG00000015952)	spryd3 (ENSAPEG00000015977)	igfbp6b (ENSAPEG00000016029)	ENSAPEG00000016063	gpr182 (ENSAPEG00000016114)	ENSAPEG00000016120	agap2 (ENSAPEG00000016168)	tspan31 (ENSAPEG00000016316)	MARCHF9 (ENSAPEG00000016342)	SLC11A2 (ENSAPEG00000016358)	ctdsp2 (ENSAPEG00000016417)	TMBIM6 (ENSAPEG00000016442)	ENSAPEG00000016486	kansl2 (ENSAPEG00000016543)	ccnt1 (ENSAPEG00000016595)
Pomacentridae_A	ANCESTRAL SPECIES	90																ENSGT00950000183126.a.p.a.r #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000178820	ENSGT00940000159085	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000164042.b	ENSGT00940000163299.A.b.c.a.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00950000183126.a.p.a.r #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Orange clownfish	MODERN SPECIES	22	taf13 (ENSAPEG00000018684)	tnnc2.2 (ENSAPEG00000018661)	TNNC2 (ENSAPEG00000018641)	ENSAPEG00000018623	ENSAPEG00000018608	ENSAPEG00000018585	lamb2 (ENSAPEG00000018433)	ENSAPEG00000018414	USP19 (ENSAPEG00000018313)	ENSAPEG00000018292	ENSAPEG00000018286	ENSAPEG00000018249	ENSAPEG00000018207	ENSAPEG00000018124	pim1 (ENSAPEG00000018085)	ENSAPEG00000018070 #22	ENSAPEG00000017962	rpl10 (ENSAPEG00000017924)	FLNA (ENSAPEG00000017783)	emd (ENSAPEG00000017765)	ENSAPEG00000017751	MRPL49 (ENSAPEG00000017747)	ENSAPEG00000017725	las1l (ENSAPEG00000017716)	ENSAPEG00000017704	ENSAPEG00000017698	atp2b3b (ENSAPEG00000017617)	ccnq (ENSAPEG00000017577)	cfap126 (ENSAPEG00000017570)	zgc:101663 (ENSAPEG00000017560)	ap4b1 (ENSAPEG00000017536)
Clown anemonefish	MODERN SPECIES	3649															pim1 (ENSAOCG00000019060)	ENSAOCG00000019034 #22	ENSAOCG00000019015	rpl10 (ENSAOCG00000018987)	FLNA (ENSAOCG00000018939)	emd (ENSAOCG00000018813)	ENSAOCG00000018797	MRPL49 (ENSAOCG00000018785)	ENSAOCG00000018763	las1l (ENSAOCG00000018717)	ENSAOCG00000018705	ENSAOCG00000018692	atp2b3a (ENSAOCG00000018660)
Spiny chromis	MODERN SPECIES	3297																ENSAPOG00000021143 #22
Bicolor damselfish	MODERN SPECIES	1499																ENSSPAG00000000560 #22	ENSSPAG00000000543	rpl10 (ENSSPAG00000000497)	FLNA (ENSSPAG00000000341)	emd (ENSSPAG00000000322)	ENSSPAG00000000313	MRPL49 (ENSSPAG00000000302)	ENSSPAG00000000294	las1l (ENSSPAG00000000289)	ENSSPAG00000000285
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Large yellow croaker	DUPLICATION
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	487	sephs3 (ENSLCRG00005019304)	ap4b1 (ENSLCRG00005019299)	zgc:101663 (ENSLCRG00005019287)	cfap126 (ENSLCRG00005019280)	ccnq (ENSLCRG00005019271)	atp2b3b (ENSLCRG00005019207)	ENSLCRG00005019127	las1l (ENSLCRG00005019124)	ENSLCRG00005019119	MRPL49 (ENSLCRG00005019115)	ENSLCRG00005019112	FLNA (ENSLCRG00005018755)	rpl10 (ENSLCRG00005018675)	ENSLCRG00005018656	ENSLCRG00005018651	ENSLCRG00005018647 #22	ENSLCRG00005018645	ENSLCRG00005018634 #22	prkcz (ENSLCRG00005018463)	skia (ENSLCRG00005018359) #7	si:ch211-251b21.1 (ENSLCRG00005018335) #17	plch2a (ENSLCRG00005018214) #14	pex10 (ENSLCRG00005018145) #12	renbp (ENSLCRG00005018138)	ENSLCRG00005018134	ENSLCRG00005018130	dennd2da (ENSLCRG00005018105)	stk38a (ENSLCRG00005018053)	MTCH1 (ENSLCRG00005018024)	stk35 (ENSLCRG00005018003)	pdyn (ENSLCRG00005017994)
Large yellow croaker	MODERN SPECIES	487	zgc:101663 (ENSLCRG00005019287)	cfap126 (ENSLCRG00005019280)	ccnq (ENSLCRG00005019271)	atp2b3b (ENSLCRG00005019207)	ENSLCRG00005019127	las1l (ENSLCRG00005019124)	ENSLCRG00005019119	MRPL49 (ENSLCRG00005019115)	ENSLCRG00005019112	FLNA (ENSLCRG00005018755)	rpl10 (ENSLCRG00005018675)	ENSLCRG00005018656	ENSLCRG00005018651	ENSLCRG00005018647 #22	ENSLCRG00005018645	ENSLCRG00005018634 #22	prkcz (ENSLCRG00005018463)	skia (ENSLCRG00005018359) #7	si:ch211-251b21.1 (ENSLCRG00005018335) #17	plch2a (ENSLCRG00005018214) #14	pex10 (ENSLCRG00005018145) #12	renbp (ENSLCRG00005018138)	ENSLCRG00005018134	ENSLCRG00005018130	dennd2da (ENSLCRG00005018105)	stk38a (ENSLCRG00005018053)	MTCH1 (ENSLCRG00005018024)	stk35 (ENSLCRG00005018003)	pdyn (ENSLCRG00005017994)	GMEB2 (ENSLCRG00005017975)	tpk2 (ENSLCRG00005017962)
Large yellow croaker	DUPLICATION
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011177	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274	ENSLCRG00005002315
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011175	ENSLCRG00005011177	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274	ENSLCRG00005002315	ENSLCRG00005002312
Large yellow croaker	MODERN SPECIES	475																ENSLCRG00005003295 #22
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	MODERN SPECIES	138															ENSDLAG00005032698 #22	ENSDLAG00005028473 #22
European seabass	MODERN SPECIES	14	ENSDLAG00005034377	ENSDLAG00005028449	ENSDLAG00005021048	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021209 #14	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005031668	ENSDLAG00005030875	ENSDLAG00005021303 #7	ENSDLAG00005021334	ENSDLAG00005003670 #22	ENSDLAG00005021641 #22	ENSDLAG00005029036 #22	ENSDLAG00005028433 #22	ENSDLAG00005006462 #22	ENSDLAG00005032911 #22	ENSDLAG00005016178 #22	ENSDLAG00005021656	ENSDLAG00005021663	ENSDLAG00005021707	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021793	ENSDLAG00005005446	ENSDLAG00005029120	ENSDLAG00005031172	ENSDLAG00005030606	ENSDLAG00005032610	ENSDLAG00005027962	ENSDLAG00005005457	ENSDLAG00005028990	atp2b3b (ENSDLAG00005005470)
European seabass	MODERN SPECIES	14	ENSDLAG00005028990	ENSDLAG00005005457	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185
European seabass	MODERN SPECIES	138															ENSDLAG00005028473 #22	ENSDLAG00005032698 #22
European seabass	DUPLICATION
European seabass	MODERN SPECIES	14	ENSDLAG00005028449	ENSDLAG00005021048	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021209 #14	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005031668	ENSDLAG00005030875	ENSDLAG00005021303 #7	ENSDLAG00005021334	ENSDLAG00005003670 #22	ENSDLAG00005021641 #22	ENSDLAG00005029036 #22	ENSDLAG00005028433 #22	ENSDLAG00005006462 #22	ENSDLAG00005032911 #22	ENSDLAG00005016178 #22	ENSDLAG00005021656	ENSDLAG00005021663	ENSDLAG00005021707	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021793	ENSDLAG00005005446	ENSDLAG00005029120	ENSDLAG00005031172	ENSDLAG00005030606	ENSDLAG00005032610	ENSDLAG00005027962	ENSDLAG00005005457	ENSDLAG00005028990	atp2b3b (ENSDLAG00005005470)	ENSDLAG00005028702
European seabass	MODERN SPECIES	14	ENSDLAG00005005457	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790
European seabass	MODERN SPECIES	14	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953	stk35 (ENSDLAG00005020931)	ENSDLAG00005020929
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	7	ube2d3 (ENSSAUG00010017230)	ENSSAUG00010017738	CPXM1 (ENSSAUG00010017743)	wdr32 (ENSSAUG00010017798)	HHIPL2 (ENSSAUG00010017799)	marc1 (ENSSAUG00010017800)	ENSSAUG00010017801	ezra (ENSSAUG00010017803)	nenf (ENSSAUG00010017830)	pacc1 (ENSSAUG00010017831)	ZNF106 (ENSSAUG00010017835)	capn3a (ENSSAUG00010017861)	GANC (ENSSAUG00010018132)	ENSSAUG00010020239 #22	ENSSAUG00010020246	ENSSAUG00010020248 #22	TMEM87A (ENSSAUG00010020251)	vps39 (ENSSAUG00010020269)	numb (ENSSAUG00010020742)	exd2 (ENSSAUG00010020758)	ENSSAUG00010020761	ENSSAUG00010020762	erh (ENSSAUG00010020765)	psen1 (ENSSAUG00010020771)	PAPLN (ENSSAUG00010020777)	ENSSAUG00010020779	ENSSAUG00010020780	ENSSAUG00010020781	ENSSAUG00010020783	ENSSAUG00010020785	ENSSAUG00010020786
Gilthead seabream	MODERN SPECIES	7	SLC39A8 (ENSSAUG00010017219)	manba (ENSSAUG00010017222)	ube2d3 (ENSSAUG00010017230)	ENSSAUG00010017738	CPXM1 (ENSSAUG00010017743)	wdr32 (ENSSAUG00010017798)	HHIPL2 (ENSSAUG00010017799)	marc1 (ENSSAUG00010017800)	ENSSAUG00010017801	ezra (ENSSAUG00010017803)	nenf (ENSSAUG00010017830)	pacc1 (ENSSAUG00010017831)	ZNF106 (ENSSAUG00010017835)	capn3a (ENSSAUG00010017861)	GANC (ENSSAUG00010018132)	ENSSAUG00010020239 #22	ENSSAUG00010020246	ENSSAUG00010020248 #22	TMEM87A (ENSSAUG00010020251)	vps39 (ENSSAUG00010020269)	numb (ENSSAUG00010020742)	exd2 (ENSSAUG00010020758)	ENSSAUG00010020761	ENSSAUG00010020762	erh (ENSSAUG00010020765)	psen1 (ENSSAUG00010020771)	PAPLN (ENSSAUG00010020777)	ENSSAUG00010020779	ENSSAUG00010020780	ENSSAUG00010020781	ENSSAUG00010020783
Gilthead seabream	MODERN SPECIES	21	tpx2 (ENSSAUG00010022075)	ENSSAUG00010022090	tpk2 (ENSSAUG00010022091)	ENSSAUG00010022093	ENSSAUG00010022094	GMEB2 (ENSSAUG00010022097)	pdyn (ENSSAUG00010022098)	ENSSAUG00010022100	ENSSAUG00010022102	stk35 (ENSSAUG00010022103)	MTCH1 (ENSSAUG00010022104)	ENSSAUG00010022111	dedd (ENSSAUG00010022825)	ENSSAUG00010022826	kcnab2b (ENSSAUG00010022828)	ENSSAUG00010022841 #22	ENSSAUG00010022843 #22	prkcz (ENSSAUG00010022848)	ENSSAUG00010022906	ENSSAUG00010022908	skia (ENSSAUG00010022911) #7	ENSSAUG00010022917	ENSSAUG00010022920	si:ch211-251b21.1 (ENSSAUG00010022930) #17	plch2a (ENSSAUG00010022935) #14	pex10 (ENSSAUG00010022946) #12	renbp (ENSSAUG00010022948)	ENSSAUG00010022949	ENSSAUG00010022950	rpl10 (ENSSAUG00010022951)	FLNA (ENSSAUG00010000588)
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b #22	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b #22	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B	ENSGT00950000182945.b.a.a.a.b.b.c.b
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	MTCH1 (ENSSLUG00000017038)	stk38a (ENSSLUG00000016983)	dennd2da (ENSSLUG00000016769)	ENSSLUG00000016746	ccr6a (ENSSLUG00000016736)	renbp (ENSSLUG00000016527)	pex10 (ENSSLUG00000016502) #12	ENSSLUG00000016471	ENSSLUG00000016461 #17	skia (ENSSLUG00000016443) #7	prkcz (ENSSLUG00000015208)	ENSSLUG00000015143 #22	ENSSLUG00000015139	ENSSLUG00000015133 #22	ENSSLUG00000015107 #22	ENSSLUG00000015088 #22	ENSSLUG00000015069	rpl10 (ENSSLUG00000015039)	FLNA (ENSSLUG00000013362)	emd (ENSSLUG00000013241)	ENSSLUG00000013239	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013236	ENSSLUG00000013229 #22	ENSSLUG00000013223	ENSSLUG00000013219	atp2b3b (ENSSLUG00000013076)	ccnq (ENSSLUG00000013050)	cfap126 (ENSSLUG00000013045)	zgc:101663 (ENSSLUG00000013044)	ap4b1 (ENSSLUG00000013003)
Pike perch	MODERN SPECIES	102	cfap126 (ENSSLUG00000013045)	ccnq (ENSSLUG00000013050)	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)	pdyn (ENSSLUG00000017107)
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	zgc:101663 (ENSSLUG00000013044)	cfap126 (ENSSLUG00000013045)	ccnq (ENSSLUG00000013050)	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)
Pike perch	MODERN SPECIES	549																ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	MODERN SPECIES	549															ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)	pdyn (ENSSLUG00000017107)	GMEB2 (ENSSLUG00000017114)	tpk2 (ENSSLUG00000017119)
Pike perch	MODERN SPECIES	549														ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	MODERN SPECIES	549													ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1503																ENSLBEG00000013767 #22	ENSLBEG00000013705 #22
Ballan wrasse	MODERN SPECIES	1503															ENSLBEG00000013767 #22	ENSLBEG00000013705 #22
Ballan wrasse	MODERN SPECIES	303				ENSLBEG00000015739	sox9a (ENSLBEG00000015835)	ENSLBEG00000015864	ENSLBEG00000015889	ENSLBEG00000015904	ENSLBEG00000015933	cox19 (ENSLBEG00000015957)	ENSLBEG00000015974	LMF1 (ENSLBEG00000016009)	RAB26 (ENSLBEG00000016067)	PEMT (ENSLBEG00000016106)	dnali1 (ENSLBEG00000016184)	ENSLBEG00000016312 #22
Ballan wrasse	MODERN SPECIES	3849																ENSLBEG00000018334 #22
Ballan wrasse	MODERN SPECIES	3023																ENSLBEG00000004495 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	187								SMCO4 (ENSLBEG00000013580)	nlk2 (ENSLBEG00000013526)	ENSLBEG00000013487	NLRX1 (ENSLBEG00000013386)	efhd1 (ENSLBEG00000013328)	kcnj13 (ENSLBEG00000013304)	GAL3ST2 (ENSLBEG00000013282)	ENSLBEG00000013249	ENSLBEG00000013230 #22	ENSLBEG00000013203 #22	ENSLBEG00000013182	ENSLBEG00000013165	slc37a4a (ENSLBEG00000013128)	slc37a4a (ENSLBEG00000013109)	trappc4 (ENSLBEG00000013080)	rps25 (ENSLBEG00000013063)	sgcg (ENSLBEG00000013026)	SACS (ENSLBEG00000012985)	ENSLBEG00000012942	MIPEP (ENSLBEG00000012788)	ENSLBEG00000012658	ENSLBEG00000012641	get1 (ENSLBEG00000012607)	sh3bgr (ENSLBEG00000012550)
Ballan wrasse	MODERN SPECIES	187							SMCO4 (ENSLBEG00000013580)	nlk2 (ENSLBEG00000013526)	ENSLBEG00000013487	NLRX1 (ENSLBEG00000013386)	efhd1 (ENSLBEG00000013328)	kcnj13 (ENSLBEG00000013304)	GAL3ST2 (ENSLBEG00000013282)	ENSLBEG00000013249	ENSLBEG00000013230 #22	ENSLBEG00000013203 #22	ENSLBEG00000013182	ENSLBEG00000013165	slc37a4a (ENSLBEG00000013128)	slc37a4a (ENSLBEG00000013109)	trappc4 (ENSLBEG00000013080)	rps25 (ENSLBEG00000013063)	sgcg (ENSLBEG00000013026)	SACS (ENSLBEG00000012985)	ENSLBEG00000012942	MIPEP (ENSLBEG00000012788)	ENSLBEG00000012658	ENSLBEG00000012641	get1 (ENSLBEG00000012607)	sh3bgr (ENSLBEG00000012550)	PCP4 (ENSLBEG00000012516)
Ballan wrasse	MODERN SPECIES	1463														ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1463															ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	MODERN SPECIES	1421															ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	MODERN SPECIES	31															ENSLBEG00000016810 #22	ENSLBEG00000016786 #22	ENSLBEG00000016745	prkcz (ENSLBEG00000016647)	skia (ENSLBEG00000016577) #7	si:ch211-251b21.1 (ENSLBEG00000016517) #17	plch2a (ENSLBEG00000016344) #14	pex10 (ENSLBEG00000016265) #12	renbp (ENSLBEG00000016211)	ENSLBEG00000016175	dennd2da (ENSLBEG00000016099)	stk38a (ENSLBEG00000016052)	MTCH1 (ENSLBEG00000016025)	stk35 (ENSLBEG00000015969)	pdyn (ENSLBEG00000015930)	GMEB2 (ENSLBEG00000015911)	tpk2 (ENSLBEG00000015877)
Ballan wrasse	MODERN SPECIES	2204																ENSLBEG00000013746 #22
Ballan wrasse	MODERN SPECIES	31	GMEB2 (ENSLBEG00000015911)	pdyn (ENSLBEG00000015930)	stk35 (ENSLBEG00000015969)	MTCH1 (ENSLBEG00000016025)	stk38a (ENSLBEG00000016052)	dennd2da (ENSLBEG00000016099)	ENSLBEG00000016175	renbp (ENSLBEG00000016211)	pex10 (ENSLBEG00000016265) #12	plch2a (ENSLBEG00000016344) #14	si:ch211-251b21.1 (ENSLBEG00000016517) #17	skia (ENSLBEG00000016577) #7	prkcz (ENSLBEG00000016647)	ENSLBEG00000016745	ENSLBEG00000016786 #22	ENSLBEG00000016810 #22
Ballan wrasse	MODERN SPECIES	553														ENSLBEG00000012118	ENSLBEG00000012038	ENSLBEG00000011996 #22	ENSLBEG00000011942 #22	sephs3 (ENSLBEG00000011912)	ap4b1 (ENSLBEG00000011810)	zgc:101663 (ENSLBEG00000011766)	cfap126 (ENSLBEG00000011728)	ccnq (ENSLBEG00000011703)	atp2b3b (ENSLBEG00000011637)	las1l (ENSLBEG00000011609)	ENSLBEG00000011597	ENSLBEG00000011572	MRPL49 (ENSLBEG00000011553)	ENSLBEG00000011522	ENSLBEG00000011495	FLNA (ENSLBEG00000011358)
Ballan wrasse	MODERN SPECIES	1463																ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1510																ENSLBEG00000014106 #22	DIRAS1 (ENSLBEG00000014078)
Ballan wrasse	MODERN SPECIES	125	ENSLBEG00000009934	ENSLBEG00000010096	ENSLBEG00000010202	ENSLBEG00000010219	ENSLBEG00000010241	ENSLBEG00000010306	MMP15 (ENSLBEG00000010748)	zpd (ENSLBEG00000011400)	nup93 (ENSLBEG00000011518)	steep1 (ENSLBEG00000011613)	sc5d (ENSLBEG00000011633)	mt2 (ENSLBEG00000011663)	anapc13 (ENSLBEG00000011674)	ENSLBEG00000011691	rspry1 (ENSLBEG00000011719)	ENSLBEG00000011793 #22	arl2bp (ENSLBEG00000011826)	pllp (ENSLBEG00000011842)	GALNT8 (ENSLBEG00000011874)	ndufa9a (ENSLBEG00000012000)	DYRK4 (ENSLBEG00000012089)	wfdc1 (ENSLBEG00000012157)	ENSLBEG00000012179	kcng4a (ENSLBEG00000012220)	ENSLBEG00000012242	hsbp1a (ENSLBEG00000012270)	ENSLBEG00000012302	mlycd (ENSLBEG00000012362)	CDH13 (ENSLBEG00000012382)	ccnd2a (ENSLBEG00000012452)
Ballan wrasse	MODERN SPECIES	1421														ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	553			FLNA (ENSLBEG00000011358)	ENSLBEG00000011495	ENSLBEG00000011522	MRPL49 (ENSLBEG00000011553)	ENSLBEG00000011572	ENSLBEG00000011597	las1l (ENSLBEG00000011609)	atp2b3b (ENSLBEG00000011637)	ccnq (ENSLBEG00000011703)	cfap126 (ENSLBEG00000011728)	zgc:101663 (ENSLBEG00000011766)	ap4b1 (ENSLBEG00000011810)	sephs3 (ENSLBEG00000011912)	ENSLBEG00000011942 #22	ENSLBEG00000011996 #22	ENSLBEG00000012038	ENSLBEG00000012118
Ballan wrasse	MODERN SPECIES	1421																ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	MODERN SPECIES	3685																ENSLBEG00000011143 #22
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Anabantoidei	ANCESTRAL SPECIES	84																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000028522	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12
Climbing perch	MODERN SPECIES	20	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193
Climbing perch	MODERN SPECIES	20	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)
Climbing perch	MODERN SPECIES	20	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287
Climbing perch	MODERN SPECIES	20	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161
Climbing perch	MODERN SPECIES	20	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)
Climbing perch	MODERN SPECIES	20	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161	ENSATEG00000022154	ENSATEG00000022145
Climbing perch	MODERN SPECIES	20	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161	ENSATEG00000022154
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000025921	ENSATEG00000028522	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14
Climbing perch	MODERN SPECIES	20	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228
Climbing perch	MODERN SPECIES	20	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276
Siamese fighting fish	DUPLICATION
Siamese fighting fish	DUPLICATION
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)	GMEB2 (ENSBSLG00000014099)	tpk2 (ENSBSLG00000014122)
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000026553	ENSBSLG00000026552	and2 (ENSBSLG00000026550)	COPS9 (ENSBSLG00000026549)	apoda.1 (ENSBSLG00000026547)	apoda.2 (ENSBSLG00000026546)	samd7 (ENSBSLG00000026545)	sec62 (ENSBSLG00000026544)	nadkb (ENSBSLG00000026536)	gpr160 (ENSBSLG00000026533)	ENSBSLG00000026532	prkci (ENSBSLG00000026515)	ENSBSLG00000026497	ENSBSLG00000026491	sppl2 (ENSBSLG00000026467)	ENSBSLG00000026448 #22	ENSBSLG00000026446	ENSBSLG00000026445	arhgef18a (ENSBSLG00000026444)	insra (ENSBSLG00000026284)	mfsd14a2 (ENSBSLG00000026162)	ENSBSLG00000026138	loxl5b (ENSBSLG00000026129)	nmrk2 (ENSBSLG00000026127)	ATCAY (ENSBSLG00000026123)	cplx4c (ENSBSLG00000026113)	rx2 (ENSBSLG00000026109)	ENSBSLG00000026085	ENSBSLG00000026013	ENSBSLG00000025946	ap1m1 (ENSBSLG00000025820)
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)	GMEB2 (ENSBSLG00000014099)
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009215	ENSBSLG00000009219	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	21	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)	ENSMAMG00000014860
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015756	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883
Zig-zag eel	MODERN SPECIES	21	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015760	ENSMAMG00000015756	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)
Carangaria	ANCESTRAL SPECIES	2	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Carangaria_A	ANCESTRAL SPECIES	55																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	429																ENSLCAG00010001117 #22	ENSLCAG00010001110 #22	prkcz (ENSLCAG00010000953)	skia (ENSLCAG00010000872) #7
Barramundi perch	MODERN SPECIES	1664																ENSLCAG00010019210 #22
Barramundi perch	MODERN SPECIES	790																ENSLCAG00010009245 #22
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	797															ENSLCAG00010007730	ENSLCAG00010007732 #22
Barramundi perch	MODERN SPECIES	1666																ENSLCAG00010022944 #22
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1622																ENSLCAG00010011024 #22
Barramundi perch	MODERN SPECIES	1842																ENSLCAG00010011071 #22
Barramundi perch	MODERN SPECIES	1678																ENSLCAG00010020431 #22
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1692																ENSLCAG00010017402 #22	ENSLCAG00010017403	ENSLCAG00010017406
Barramundi perch	MODERN SPECIES	869																ENSLCAG00010000449 #22	ENSLCAG00010000453	ENSLCAG00010000463	rpl10 (ENSLCAG00010000468)
Seriola	DUPLICATION
Seriola	DUPLICATION
Seriola	ANCESTRAL SPECIES	113																ENSGT00950000183126.a.p.a.jb.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.f	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2720															ENSSLDG00000000724 #22	ENSSLDG00000000737 #22	ENSSLDG00000000769	rpl10 (ENSSLDG00000000776)	FLNA (ENSSLDG00000000850)	emd (ENSSLDG00000001470)	ENSSLDG00000001502	ENSSLDG00000001518	MRPL49 (ENSSLDG00000001537)	ENSSLDG00000001558
Yellowtail amberjack	MODERN SPECIES	2883	icmt (ENSSLDG00000016837)	rtel1 (ENSSLDG00000016644)	ndufb11 (ENSSLDG00000016591)	tbc1d25 (ENSSLDG00000016567)	ccdc22 (ENSSLDG00000016478)	slc38a5b (ENSSLDG00000016357)	slc2a1a (ENSSLDG00000016318)	mthfr (ENSSLDG00000016286)	CLCN6 (ENSSLDG00000016190)	nppal (ENSSLDG00000016150)	nppb (ENSSLDG00000016139)	nppa (ENSSLDG00000016129)	ARHGEF10L (ENSSLDG00000016035)	tnnc1b (ENSSLDG00000015992)	dedd (ENSSLDG00000015966)	ENSSLDG00000015938 #22
Greater amberjack	MODERN SPECIES	191																ENSSDUG00000013602 #22	ENSSDUG00000013621 #22	ENSSDUG00000013640	rpl10 (ENSSDUG00000013659)	FLNA (ENSSDUG00000013710)	emd (ENSSDUG00000013792)	NINJ1 (ENSSDUG00000013808)	MRPL49 (ENSSDUG00000013816)	ENSSDUG00000013818	ENSSDUG00000013831	atp2b3b (ENSSDUG00000013844)	ccnq (ENSSDUG00000013965)	cfap126 (ENSSDUG00000013970)	zgc:101663 (ENSSDUG00000013979)	ap4b1 (ENSSDUG00000013990)	sephs3 (ENSSDUG00000014003)
Seriola	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a.jb.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2883	ENSSLDG00000018842	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)	pdyn (ENSSLDG00000017106)
Yellowtail amberjack	MODERN SPECIES	2883	ABHD17A (ENSSLDG00000018861)	ENSSLDG00000018842	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)
Yellowtail amberjack	MODERN SPECIES	2720							ENSSLDG00000001558	MRPL49 (ENSSLDG00000001537)	ENSSLDG00000001518	ENSSLDG00000001502	emd (ENSSLDG00000001470)	FLNA (ENSSLDG00000000850)	rpl10 (ENSSLDG00000000776)	ENSSLDG00000000769	ENSSLDG00000000737 #22	ENSSLDG00000000724 #22
Greater amberjack	MODERN SPECIES	134																ENSSDUG00000002783 #22	ENSSDUG00000002761 #22	prkcz (ENSSDUG00000002703)	skia (ENSSDUG00000002658) #7	ENSSDUG00000002639	si:ch211-251b21.1 (ENSSDUG00000002623) #17	plch2a (ENSSDUG00000002588) #14	pex10 (ENSSDUG00000002561) #12	renbp (ENSSDUG00000002522)	ENSSDUG00000002508	ENSSDUG00000002491	dennd2da (ENSSDUG00000002435)	stk38a (ENSSDUG00000002369)	MTCH1 (ENSSDUG00000002338)	stk35 (ENSSDUG00000002332)	pdyn (ENSSDUG00000002320)
Seriola	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.kb #22
Greater amberjack	MODERN SPECIES	191															ENSSDUG00000013602 #22	ENSSDUG00000013621 #22	ENSSDUG00000013640	rpl10 (ENSSDUG00000013659)	FLNA (ENSSDUG00000013710)	emd (ENSSDUG00000013792)	NINJ1 (ENSSDUG00000013808)	MRPL49 (ENSSDUG00000013816)	ENSSDUG00000013818	ENSSDUG00000013831	atp2b3b (ENSSDUG00000013844)	ccnq (ENSSDUG00000013965)	cfap126 (ENSSDUG00000013970)	zgc:101663 (ENSSDUG00000013979)	ap4b1 (ENSSDUG00000013990)	sephs3 (ENSSDUG00000014003)	ikbkg (ENSSDUG00000014012)
Pleuronectoidei	ANCESTRAL SPECIES	41	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT01060000248869	ENSGT00940000178462	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	1	sephs3 (ENSCSEG00000003334)	ap4b1 (ENSCSEG00000003328)	zgc:101663 (ENSCSEG00000003323)	cfap126 (ENSCSEG00000003322)	ccnq (ENSCSEG00000003319)	atp2b3b (ENSCSEG00000003290)	rpl10 (ENSCSEG00000003267)	ENSCSEG00000003231	las1l (ENSCSEG00000003223)	ENSCSEG00000003220	FLNA (ENSCSEG00000003135)	ENSCSEG00000003121	ENSCSEG00000003120	MRPL49 (ENSCSEG00000003115)	ENSCSEG00000003106	ENSCSEG00000003100 #22	ENSCSEG00000003071 #22	prkcz (ENSCSEG00000003042)	skia (ENSCSEG00000003029) #7	SNPH (ENSCSEG00000003019)	sdcbp2 (ENSCSEG00000002995)	fkbp1ab (ENSCSEG00000002991)	nsfl1c (ENSCSEG00000002978)	ENSCSEG00000002977	cox4i2 (ENSCSEG00000002973)	bcl2l1 (ENSCSEG00000002958)	ARFGEF2 (ENSCSEG00000002931)	pard6b (ENSCSEG00000002930)	ENSCSEG00000002928	adnpb (ENSCSEG00000002926)	dpm1 (ENSCSEG00000002918)
Tongue sole	MODERN SPECIES	1	ap4b1 (ENSCSEG00000003328)	zgc:101663 (ENSCSEG00000003323)	cfap126 (ENSCSEG00000003322)	ccnq (ENSCSEG00000003319)	atp2b3b (ENSCSEG00000003290)	rpl10 (ENSCSEG00000003267)	ENSCSEG00000003231	las1l (ENSCSEG00000003223)	ENSCSEG00000003220	FLNA (ENSCSEG00000003135)	ENSCSEG00000003121	ENSCSEG00000003120	MRPL49 (ENSCSEG00000003115)	ENSCSEG00000003106	ENSCSEG00000003100 #22	ENSCSEG00000003071 #22	prkcz (ENSCSEG00000003042)	skia (ENSCSEG00000003029) #7	SNPH (ENSCSEG00000003019)	sdcbp2 (ENSCSEG00000002995)	fkbp1ab (ENSCSEG00000002991)	nsfl1c (ENSCSEG00000002978)	ENSCSEG00000002977	cox4i2 (ENSCSEG00000002973)	bcl2l1 (ENSCSEG00000002958)	ARFGEF2 (ENSCSEG00000002931)	pard6b (ENSCSEG00000002930)	ENSCSEG00000002928	adnpb (ENSCSEG00000002926)	dpm1 (ENSCSEG00000002918)	ENSCSEG00000002893
Tongue sole	MODERN SPECIES	7	si:dkey-69o16.5 (ENSCSEG00000020784)	ENSCSEG00000020782	ENSCSEG00000020780	ENSCSEG00000020778	ENSCSEG00000020775	ENSCSEG00000020771	ENSCSEG00000020764	tmem237a (ENSCSEG00000020761)	cnot11 (ENSCSEG00000020759)	lcp1 (ENSCSEG00000020752)	ENSCSEG00000020748	itm2bb (ENSCSEG00000020746)	med4 (ENSCSEG00000020743)	sucla2 (ENSCSEG00000020741)	ENSCSEG00000020730	ENSCSEG00000020724 #22	ENSCSEG00000020717	ENSCSEG00000020711	slc37a1 (ENSCSEG00000020705)	PDE9A (ENSCSEG00000020701)	ENSCSEG00000020696	ENSCSEG00000020694	ENSCSEG00000020693	ENSCSEG00000020692	ifngr2 (ENSCSEG00000020690)	ENSCSEG00000020689	ENSCSEG00000020687	ENSCSEG00000020683	ENSCSEG00000020682	ENSCSEG00000020681	pknox1.1 (ENSCSEG00000020679)
Tongue sole	MODERN SPECIES		dachb (ENSCSEG00000005103)	ENSCSEG00000005073	stk26 (ENSCSEG00000005056)	zgc:77880 (ENSCSEG00000005054)	ENSCSEG00000005048	pip4p1b (ENSCSEG00000005042)	ENSCSEG00000005021	ENSCSEG00000005015	dysf (ENSCSEG00000004989)	cyp26b1 (ENSCSEG00000004973)	camk2d1 (ENSCSEG00000004948)	rpl17 (ENSCSEG00000004760)	ARSJ (ENSCSEG00000004731)	mad2l1 (ENSCSEG00000004726)	pde5ab (ENSCSEG00000004689)	ENSCSEG00000004679 #22	ENSCSEG00000004675	zcchc4 (ENSCSEG00000004671)	ABLIM2 (ENSCSEG00000004654)	AFAP1 (ENSCSEG00000004634)	STIM2 (ENSCSEG00000004617)	tbc1d19 (ENSCSEG00000004592)	CCKAR (ENSCSEG00000004584)	RBPJ (ENSCSEG00000004581)	smim20 (ENSCSEG00000004579)	ENSCSEG00000004575	ENSCSEG00000004573	sat2a.2 (ENSCSEG00000004567)	tnfsf12 (ENSCSEG00000004560)	ENSCSEG00000004557	CHD3 (ENSCSEG00000004489)
Tongue sole	MODERN SPECIES	10	ftr83 (ENSCSEG00000011391)	ruvbl2 (ENSCSEG00000011364)	SPNS2 (ENSCSEG00000011335)	ube2g1a (ENSCSEG00000011314)	ankfy1 (ENSCSEG00000011282)	cyb5d2 (ENSCSEG00000011274)	ZZEF1 (ENSCSEG00000011204)	ATP2A3 (ENSCSEG00000011132)	camkk1a (ENSCSEG00000011071)	p2rx1 (ENSCSEG00000011044)	dhx33 (ENSCSEG00000011017)	c1qbp (ENSCSEG00000011004)	ENSCSEG00000010991	SRRM3 (ENSCSEG00000010978)	hspb1 (ENSCSEG00000010973)	ENSCSEG00000010966 #22	YWHAG (ENSCSEG00000010962)	ENSCSEG00000010953	ENSCSEG00000010919	supt4h1 (ENSCSEG00000010897)	ENSCSEG00000010890	ENSCSEG00000010885	ENSCSEG00000010880	hpda (ENSCSEG00000010853)	MTMR4 (ENSCSEG00000010749)	ca4a (ENSCSEG00000010729)	tmem132e (ENSCSEG00000010685)	dtx2 (ENSCSEG00000010666)	GTF2IRD1 (ENSCSEG00000010605)	CLIP2 (ENSCSEG00000010519)	cldn2 (ENSCSEG00000010506)
Turbot	MODERN SPECIES	2	ENSSMAG00000001521	atp2b3b (ENSSMAG00000001353)	ENSSMAG00000001328	cfap126 (ENSSMAG00000001320)	ENSSMAG00000001296	ENSSMAG00000001287	ENSSMAG00000001258	ENSSMAG00000001223	tmed4 (ENSSMAG00000001198)	plpbp (ENSSMAG00000001176)	snrpg (ENSSMAG00000034866)	ENSSMAG00000001166	ENSSMAG00000001108	ENSSMAG00000001033	ENSSMAG00000000997	ENSSMAG00000000746 #22	kif3b (ENSSMAG00000000775)	pofut1 (ENSSMAG00000000831)	plagl2 (ENSSMAG00000036259)	tm9sf4 (ENSSMAG00000000839)	HCK (ENSSMAG00000000875)	ENSSMAG00000000889	gata5 (ENSSMAG00000000905)	ENSSMAG00000023086	ENSSMAG00000000977	SLCO4A1 (ENSSMAG00000011046)	ENSSMAG00000011080	ENSSMAG00000011091	ENSSMAG00000011105	ENSSMAG00000011129	ENSSMAG00000033237
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	64																ENSHCOG00000011050 #22
Tiger tail seahorse	MODERN SPECIES	404	ap4b1 (ENSHCOG00000014600)	zgc:101663 (ENSHCOG00000014574)	cfap126 (ENSHCOG00000014569)	ccnq (ENSHCOG00000014564)	atp2b3b (ENSHCOG00000014556)	ENSHCOG00000014516	ENSHCOG00000014504	ENSHCOG00000014496	NINJ1 (ENSHCOG00000014486)	emd (ENSHCOG00000014478)	ENSHCOG00000014471	ENSHCOG00000014442	rpl10 (ENSHCOG00000014435)	ENSHCOG00000014425	ENSHCOG00000014408	ENSHCOG00000014403 #22	prkcz (ENSHCOG00000014393)	skia (ENSHCOG00000014360) #7	skia (ENSHCOG00000014355) #7	si:ch211-251b21.1 (ENSHCOG00000014345) #17	PLCH2 (ENSHCOG00000014342) #14	pex10 (ENSHCOG00000014307) #12	renbp (ENSHCOG00000014303)	ENSHCOG00000014272	dennd2da (ENSHCOG00000014260)	stk38a (ENSHCOG00000014243)	MTCH1 (ENSHCOG00000000398)	stk35 (ENSHCOG00000000396)	pdyn (ENSHCOG00000014163)	GMEB2 (ENSHCOG00000014151)	ENSHCOG00000014137
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	21	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)	icmt (ENSMMDG00005000845)
Pinecone sodierfish	MODERN SPECIES	21	b3gnt7l (ENSMMDG00005024307)	ENSMMDG00005024309	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)
Pinecone sodierfish	MODERN SPECIES	21	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)
Pinecone sodierfish	MODERN SPECIES	21	CEP104 (ENSMMDG00005024303)	b3gnt7l (ENSMMDG00005024307)	ENSMMDG00005024309	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		fance (ENSGMOG00000008217)	rpl10a (ENSGMOG00000008210)	ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659
Cod	MODERN SPECIES		ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044	ENSGMOG00000027969	ENSGMOG00000005869
Cod	MODERN SPECIES		ENSGMOG00000032961	ENSGMOG00000006304	ENSGMOG00000014418	ENSGMOG00000031361	ttll9 (ENSGMOG00000014393)	ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044	ENSGMOG00000027969
Cod	MODERN SPECIES		ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000006488	ENSGMOG00000006453	vwa1 (ENSGMOG00000006448)	ENSGMOG00000012759	ENSGMOG00000037186	ENSGMOG00000012747	ENSGMOG00000012741	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000022869	ENSGMOG00000012722	DENND2C (ENSGMOG00000012718)	ENSGMOG00000025412	ENSGMOG00000027008 #22	ENSGMOG00000036200 #22	ENSGMOG00000026195 #22	ENSGMOG00000028189 #22	ENSGMOG00000023095	ENSGMOG00000009770	ENSGMOG00000009725	ENSGMOG00000010358	ENSGMOG00000010338	ENSGMOG00000029644	ENSGMOG00000010329	ENSGMOG00000010281	ENSGMOG00000025024	ENSGMOG00000010260	ENSGMOG00000010255	UBA3 (ENSGMOG00000010238)	ARL6IP5 (ENSGMOG00000010233)	LMOD3 (ENSGMOG00000028614)	FRMD4B (ENSGMOG00000010202)
Cod	MODERN SPECIES		UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246	ENSGMOG00000006540	ENSGMOG00000006567
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518	ENSGMOG00000003528
Cod	MODERN SPECIES		LMOD3 (ENSGMOG00000028614)	ARL6IP5 (ENSGMOG00000010233)	UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246
Cod	MODERN SPECIES		phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116
Cod	MODERN SPECIES		ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105
Cod	MODERN SPECIES		ttll9 (ENSGMOG00000014393)	ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136
Cod	MODERN SPECIES		rpl10a (ENSGMOG00000008210)	ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518
Cod	DUPLICATION
Cod	MODERN SPECIES	147										ENSGMOG00000029134	ENSGMOG00000035578	ENSGMOG00000036381	ENSGMOG00000033025	ENSGMOG00000032683	ENSGMOG00000022886	ENSGMOG00000024435 #22
Cod	MODERN SPECIES		ARL6IP5 (ENSGMOG00000010233)	UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246	ENSGMOG00000006540
Cod	MODERN SPECIES	18	ENSGMOG00000013008	ENSGMOG00000032728	ENSGMOG00000030150	ENSGMOG00000014304	ENSGMOG00000001292	ENSGMOG00000020465	ENSGMOG00000034444	mrps26 (ENSGMOG00000029210)	loxl3b (ENSGMOG00000015943)	pank2 (ENSGMOG00000015936)	ENSGMOG00000015933	ENSGMOG00000025282	sfxn5a (ENSGMOG00000015884)	emx1 (ENSGMOG00000015872)	noto (ENSGMOG00000015860)	ENSGMOG00000029495 #22	ENSGMOG00000025271	ENSGMOG00000000236	ap5s1 (ENSGMOG00000030914)	ENSGMOG00000005213	ENSGMOG00000005262	rpia (ENSGMOG00000005294)	ENSGMOG00000022287	ENSGMOG00000024688	dnaaf9 (ENSGMOG00000006306)	ENSGMOG00000006359	ENSGMOG00000027099	SGPP1 (ENSGMOG00000030796)	ENSGMOG00000028601	wdr89 (ENSGMOG00000022613)	ppp2r5eb (ENSGMOG00000009392)
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000032675	ENSGMOG00000033031	dffb (ENSGMOG00000013261)	ENSGMOG00000022175	ENSGMOG00000015826	ENSGMOG00000025158	ENSGMOG00000026474	ENSGMOG00000022275	ENSGMOG00000003596	ENSGMOG00000018785	NADK (ENSGMOG00000008413)	ENSGMOG00000036919	ENSGMOG00000008410	ENSGMOG00000008407	ENSGMOG00000008405 #22	ENSGMOG00000008404 #22	ENSGMOG00000015911	ENSGMOG00000026487	nr1h5 (ENSGMOG00000015966)	slc66a1 (ENSGMOG00000015992)	trim33 (ENSGMOG00000016005)	bcas2 (ENSGMOG00000014357)	krt8 (ENSGMOG00000014429)	krt18a.1 (ENSGMOG00000000117)	krt18a.2 (ENSGMOG00000028474)	ENSGMOG00000004659	ENSGMOG00000004729	ENSGMOG00000004749	sars1 (ENSGMOG00000004761)	ENSGMOG00000028311	fam50a (ENSGMOG00000004783)
Cod	MODERN SPECIES		ENSGMOG00000022392	ENSGMOG00000032675	ENSGMOG00000033031	dffb (ENSGMOG00000013261)	ENSGMOG00000022175	ENSGMOG00000015826	ENSGMOG00000025158	ENSGMOG00000026474	ENSGMOG00000022275	ENSGMOG00000003596	ENSGMOG00000018785	NADK (ENSGMOG00000008413)	ENSGMOG00000036919	ENSGMOG00000008410	ENSGMOG00000008407	ENSGMOG00000008405 #22	ENSGMOG00000008404 #22	ENSGMOG00000015911	ENSGMOG00000026487	nr1h5 (ENSGMOG00000015966)	slc66a1 (ENSGMOG00000015992)	trim33 (ENSGMOG00000016005)	bcas2 (ENSGMOG00000014357)	krt8 (ENSGMOG00000014429)	krt18a.1 (ENSGMOG00000000117)	krt18a.2 (ENSGMOG00000028474)	ENSGMOG00000004659	ENSGMOG00000004729	ENSGMOG00000004749	sars1 (ENSGMOG00000004761)	ENSGMOG00000028311
Protacanthopterygii	ANCESTRAL SPECIES	186								ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000156186.k	ENSGT00940000153792.B.p	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.a #22
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000002738	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166
Oncorhynchus_a	ANCESTRAL SPECIES	685																ENSGT00950000183126.a.p.a.tb.a.a.a #22	ENSGT00950000183126.a.p.b.k #22
Coho salmon	MODERN SPECIES	8	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759	MYT1 (ENSOKIG00005007791)	TBC1D22B (ENSOKIG00005007941)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.b #22
Coho salmon	MODERN SPECIES	8	LHFPL4 (ENSOKIG00005004913)	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a	ENSGT00390000004928.z
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	102					ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Chinook salmon	MODERN SPECIES	102							ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1362																ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.ub.b #22
Salmoninae_a	ANCESTRAL SPECIES	266																ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000156364.a.a.c	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554
Huchen	MODERN SPECIES	1064					ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae	ANCESTRAL SPECIES	408	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.b.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
River trout	DUPLICATION
River trout	DUPLICATION
River trout	MODERN SPECIES	20	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)
River trout	MODERN SPECIES	20	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)
River trout	MODERN SPECIES	20	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)	ENSSTUG00000016414
Huchen	MODERN SPECIES	1064			ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	408	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f
Huchen	MODERN SPECIES	1064						skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b	ENSGT00940000153110.B.e.a
River trout	MODERN SPECIES	20	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020535	ENSSTUG00000021778
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073437	ENSSSAG00000114644	ENSSSAG00000109446	ENSSSAG00000073509	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b
Chinook salmon	MODERN SPECIES	102							ENSOTSG00005038811	prkcz (ENSOTSG00005038810)	ENSOTSG00005038808 #22	ENSOTSG00005038801 #22	ENSOTSG00005038760 #22	ENSOTSG00005038758	ENSOTSG00005038753 #22	ENSOTSG00005038749 #22	ENSOTSG00005038746 #22	ENSOTSG00005038744 #22	sars1 (ENSOTSG00005038578)	ENSOTSG00005038574	tmem106c (ENSOTSG00005038572)	ENSOTSG00005037786
Coho salmon	MODERN SPECIES	8	plagl2 (ENSOKIG00005007631)	tm9sf4 (ENSOKIG00005007408)	ENSOKIG00005007378	ENSOKIG00005007372	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007345	PLCH2 (ENSOKIG00005006908) #14	si:ch211-251b21.1 (ENSOKIG00005006806) #17	SKI (ENSOKIG00005006789) #7	PRKCZ (ENSOKIG00005006443)	ENSOKIG00005006374 #22	ENSOKIG00005006279 #22	ENSOKIG00005006238 #22	ENSOKIG00005006206	ENSOKIG00005006107 #22	ENSOKIG00005006062 #22	sars1 (ENSOKIG00005006030)	tmem106c (ENSOKIG00005006005)	ENSOKIG00005005883	ENSOKIG00005005837	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005680	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005052	ENSOKIG00005004949	ENSOKIG00005004943	ENSOKIG00005004925	LHFPL4 (ENSOKIG00005004913)	CPNE9 (ENSOKIG00005004627)	klf15 (ENSOKIG00005004576)	ENSOKIG00005004548
Salmoninae	ANCESTRAL SPECIES	2186															ENSGT00940000154356.D.a.b.g	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Atlantic salmon	MODERN SPECIES	6	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774
River trout	MODERN SPECIES	20	ENSSTUG00000020393	ENSSTUG00000019840	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Coho salmon	MODERN SPECIES	8	klf15 (ENSOKIG00005004576)	CPNE9 (ENSOKIG00005004627)	LHFPL4 (ENSOKIG00005004913)	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)
Huchen	MODERN SPECIES	1064									skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae	ANCESTRAL SPECIES	2185																ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Huchen	MODERN SPECIES	1064								skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae_a	ANCESTRAL SPECIES	266													ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b
River trout	MODERN SPECIES	20	plch2a (ENSSTUG00000017430) #14	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020535
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000105477 ##29	ENSSSAG00000061746 #22	ENSSSAG00000120187 #22	ENSSSAG00000120624 #22	ENSSSAG00000061491 #22	ENSSSAG00000085590 #22	ENSSSAG00000061788 #22	ENSSSAG00000074966 #22	ENSSSAG00000082322 #22	ENSSSAG00000108024 #22	ENSSSAG00000061624 #22	ENSSSAG00000061684 #22	ENSSSAG00000061429 #22	ENSSSAG00000074962 #22	ENSSSAG00000074972 #22	ENSSSAG00000086609 #22	ENSSSAG00000099494 #22	ENSSSAG00000074952 #22	ENSSSAG00000074926	ENSSSAG00000109676	ENSSSAG00000074909	ENSSSAG00000074344	eif4ba (ENSSSAG00000074310)	krt18a.2 (ENSSSAG00000074300)	krt18a.1 (ENSSSAG00000074296)	k2c8 (ENSSSAG00000074245)	ENSSSAG00000120869	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000073571	ENSSSAG00000073509	ENSSSAG00000109446
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000156364.a.a.c	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	30	cyp2k5 (ENSOMYG00000002099)	ENSOMYG00000055096	ENSOMYG00000058331	ENSOMYG00000002157	ENSOMYG00000002738	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000053638	tm9sf4 (ENSOMYG00000007426)	pex10 (ENSOMYG00000007764) #12	ENSOMYG00000007909 #14	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000057974	ENSOMYG00000004448 #7	ENSOMYG00000004359	ENSOMYG00000004196 #22	ENSOMYG00000004142 #22	ENSOMYG00000060044 #22	ENSOMYG00000053062	ENSOMYG00000074064	ENSOMYG00000018945	ENSOMYG00000003739 #22	ENSOMYG00000059123 #22	ENSOMYG00000003341	ENSOMYG00000003246	ENSOMYG00000003233	ENSOMYG00000074098	ENSOMYG00000003150	krt18a.2 (ENSOMYG00000003124)	krt18a.1 (ENSOMYG00000003109)	krt8 (ENSOMYG00000057091)	zgc:171775 (ENSOMYG00000003062)	ENSOMYG00000002738	ENSOMYG00000002157	ENSOMYG00000058331	ENSOMYG00000055096	cyp2k5 (ENSOMYG00000002099)	ENSOMYG00000077356
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a
Chinook salmon	MODERN SPECIES	102								ENSOTSG00005038811	prkcz (ENSOTSG00005038810)	ENSOTSG00005038808 #22	ENSOTSG00005038801 #22	ENSOTSG00005038760 #22	ENSOTSG00005038758	ENSOTSG00005038753 #22	ENSOTSG00005038749 #22	ENSOTSG00005038746 #22	ENSOTSG00005038744 #22	sars1 (ENSOTSG00005038578)	ENSOTSG00005038574	tmem106c (ENSOTSG00005038572)	ENSOTSG00005037786
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Salmo	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14
Atlantic salmon	MODERN SPECIES	6	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7
Oncorhynchus	ANCESTRAL SPECIES	534																ENSGT00950000183126.a.p.a.ub.a.a.a.b #22	ENSGT00950000183126.a.p.b.k #22
Rainbow trout	MODERN SPECIES	30	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166	ENSOMYG00000074161	ENSOMYG00000006241
Salmoninae	ANCESTRAL SPECIES	2185															ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES	266												ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000061746 #22	ENSSSAG00000120187 #22	ENSSSAG00000120624 #22	ENSSSAG00000061491 #22	ENSSSAG00000085590 #22	ENSSSAG00000061788 #22	ENSSSAG00000074966 #22	ENSSSAG00000082322 #22	ENSSSAG00000108024 #22	ENSSSAG00000061624 #22	ENSSSAG00000061684 #22	ENSSSAG00000061429 #22	ENSSSAG00000074962 #22	ENSSSAG00000074972 #22	ENSSSAG00000086609 #22	ENSSSAG00000099494 #22	ENSSSAG00000074952 #22	ENSSSAG00000074926	ENSSSAG00000109676	ENSSSAG00000074909	ENSSSAG00000074344	eif4ba (ENSSSAG00000074310)	krt18a.2 (ENSSSAG00000074300)	krt18a.1 (ENSSSAG00000074296)	k2c8 (ENSSSAG00000074245)	ENSSSAG00000120869	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000073571	ENSSSAG00000073509	ENSSSAG00000109446	ENSSSAG00000114644
Huchen	MODERN SPECIES	1064							skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.b #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Salmo	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.b #22
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073509	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531
Atlantic salmon	MODERN SPECIES	6	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Chinook salmon	MODERN SPECIES	102									ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Salmoninae	ANCESTRAL SPECIES	1362																ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22
Huchen	MODERN SPECIES	1064						ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae_a	ANCESTRAL SPECIES	266														ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h
River trout	MODERN SPECIES	20	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020433	ENSSTUG00000020393	ENSSTUG00000019840	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000162649.e.a.b.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c
Chinook salmon	MODERN SPECIES	102										ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	11	ENSELUG00000025389	ENSELUG00000012148	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12
Northern pike	MODERN SPECIES	11	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)
Northern pike	MODERN SPECIES	11	ENSELUG00000012148	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457
Northern pike	MODERN SPECIES	11	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)
Northern pike	MODERN SPECIES	11	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)
Osteoglossiformes	ANCESTRAL SPECIES	727																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030335	ENSSFOG00015021340	ENSSFOG00015029569	ENSSFOG00015032610	ENSSFOG00015028826	ENSSFOG00015023512	ENSSFOG00015030218	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535	ENSSFOG00015031739
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015021340	ENSSFOG00015029569	ENSSFOG00015032610	ENSSFOG00015028826	ENSSFOG00015023512	ENSSFOG00015030218	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683	ENSSFOG00015031584
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22
Asian bonytongue	MODERN SPECIES	11	plod1a (ENSSFOG00015010374)	si:dkeyp-104h9.5 (ENSSFOG00015027990)	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984
Asian bonytongue	MODERN SPECIES	11	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22
Asian bonytongue	MODERN SPECIES	11	si:dkeyp-104h9.5 (ENSSFOG00015027990)	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029265	ENSSFOG00015029436	ENSSFOG00015025968	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)
Asian bonytongue	MODERN SPECIES	11	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015025968	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10	ENSSFOG00015009822 #17
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	735													PLCD3 (ENSPKIG00000003226)	acbd4 (ENSPKIG00000003043)	hexim1 (ENSPKIG00000002959)	ENSPKIG00000002939 #22	ENSPKIG00000002916 #22
P. kingsleyae	MODERN SPECIES	3	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	37																ENSPKIG00000014581 #22	ENSPKIG00000014549 #22	ENSPKIG00000014478 #22	prkcz (ENSPKIG00000014407)	skia (ENSPKIG00000014364) #7	ENSPKIG00000014336 #17	ENSPKIG00000014315	pex10 (ENSPKIG00000014293) #12	mthfr (ENSPKIG00000014252)	CLCN6 (ENSPKIG00000014156)	ENSPKIG00000014121	ENSPKIG00000014100	nppal (ENSPKIG00000014077)	ENSPKIG00000014051	si:dkeyp-104h9.5 (ENSPKIG00000014031)	plod1a (ENSPKIG00000013959)
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	3	ENSPKIG00000013207	rhoab (ENSPKIG00000013242)	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	1197																ENSPKIG00000017116 #22
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	3	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	37	ENSPKIG00000013839	mfn2 (ENSPKIG00000013870)	plod1a (ENSPKIG00000013959)	si:dkeyp-104h9.5 (ENSPKIG00000014031)	ENSPKIG00000014051	nppal (ENSPKIG00000014077)	ENSPKIG00000014100	ENSPKIG00000014121	CLCN6 (ENSPKIG00000014156)	mthfr (ENSPKIG00000014252)	pex10 (ENSPKIG00000014293) #12	ENSPKIG00000014315	ENSPKIG00000014336 #17	skia (ENSPKIG00000014364) #7	prkcz (ENSPKIG00000014407)	ENSPKIG00000014478 #22	ENSPKIG00000014549 #22	ENSPKIG00000014581 #22
P. kingsleyae	MODERN SPECIES	3	rhoab (ENSPKIG00000013242)	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
Spotted gar	MODERN SPECIES	664	CALML6 (ENSLOCG00000006125)	TMEM52 (ENSLOCG00000006109)	CFAP74 (ENSLOCG00000006094)	GABRD (ENSLOCG00000006079)	ENSLOCG00000006064	ENSLOCG00000006048	ENSLOCG00000006021	NPHP4 (ENSLOCG00000005969)	dffb (ENSLOCG00000005950)	b3gnt7l (ENSLOCG00000018085)	CEP104 (ENSLOCG00000005920)	lrrc47 (ENSLOCG00000005902)	SMIM1 (ENSLOCG00000005888)	mad2l2 (ENSLOCG00000005872)	ENSLOCG00000005857	zgc:153631 (ENSLOCG00000005841) #22	ENSLOCG00000005819 #22	prkcz (ENSLOCG00000005744)	skia (ENSLOCG00000005728) #7	MORN1 (ENSLOCG00000005712) #10	si:ch211-251b21.1 (ENSLOCG00000005680) #17	plch2a (ENSLOCG00000005648) #14	pex10 (ENSLOCG00000005635) #12	mthfr (ENSLOCG00000005606)	CLCN6 (ENSLOCG00000005577)	nppb (ENSLOCG00000005558)	ENSLOCG00000005537	nppal (ENSLOCG00000005514)	ENSLOCG00000005508	si:dkeyp-104h9.5 (ENSLOCG00000005478)	plod1a (ENSLOCG00000005408)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Osteoglossocephalai	ANCESTRAL SPECIES	841															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Clupeocephala	ANCESTRAL SPECIES	114	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284
Otomorpha	ANCESTRAL SPECIES	198	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	DUSP7 (ENSCHAG00000019003)	atp6ap1a (ENSCHAG00000018899)	tafazzin (ENSCHAG00000018782)	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)
Atlantic herring	MODERN SPECIES	20	wrap73 (ENSCHAG00000022313)	tp73 (ENSCHAG00000022349)	rer1 (ENSCHAG00000022408) #11	ENSCHAG00000022436	ENSCHAG00000022683	ENSCHAG00000022907	ENSCHAG00000023125	adora1b (ENSCHAG00000023190)	ENSCHAG00000023193	mfn2 (ENSCHAG00000000163)	ENSCHAG00000000245	ENSCHAG00000000287	ENSCHAG00000000291	ENSCHAG00000000297	ENSCHAG00000000318 #22	ENSCHAG00000000327 #22	ENSCHAG00000000833	skia (ENSCHAG00000001665) #7	ENSCHAG00000001765	si:ch211-251b21.1 (ENSCHAG00000001767) #17	plch2a (ENSCHAG00000001857) #14	pex10 (ENSCHAG00000003014) #12	ENSCHAG00000003132	ENSCHAG00000003174	nppal (ENSCHAG00000003202)	si:dkeyp-104h9.5 (ENSCHAG00000003221)	plod1a (ENSCHAG00000003555)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)	plod1a (ENSDCDG00000017733)
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)	plod1a (ENSDCDG00000017733)	mfn2 (ENSDCDG00000021481)
Otophysi	ANCESTRAL SPECIES	309	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	ANCESTRAL SPECIES	41	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Characiphysae_b	ANCESTRAL SPECIES	100														ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Characoidei	ANCESTRAL SPECIES	99														ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k	ENSGT00390000017443	ENSGT00390000009578
Red-bellied piranha	MODERN SPECIES	516														ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)	mrps36 (ENSPNAG00000014559)
Mexicana tetra	MODERN SPECIES	1238													ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Electric eel	MODERN SPECIES	220										lhx4 (ENSEEEG00000012297)	qsox1 (ENSEEEG00000012293)	ENSEEEG00000012288	ENSEEEG00000012282	CACNA1E (ENSEEEG00000011866)	ENSEEEG00000011854 #22	zgc:158862 (ENSEEEG00000011853) #22	cbwd (ENSEEEG00000011849)	foxd5 (ENSEEEG00000011846)	pgm5 (ENSEEEG00000011741)	ENSEEEG00000011735	smim15 (ENSEEEG00000011734)	ndufaf2 (ENSEEEG00000011732)	ercc8 (ENSEEEG00000011665)	elovl7a (ENSEEEG00000011663)	ENSEEEG00000011662	ENSEEEG00000011661	PDE4D (ENSEEEG00000011209)	rab3c (ENSEEEG00000011194)	si:dkey-190g11.3 (ENSEEEG00000011189)	plk2b (ENSEEEG00000010909)	mier3b (ENSEEEG00000010904)
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	24	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)	cenph (ENSIPUG00000008396)
Channel catfish	MODERN SPECIES	24	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)	cenph (ENSIPUG00000008396)	pola2 (ENSIPUG00000008448)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b	ENSGT00940000168127.a.a	ENSGT00940000157989.a.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37					ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a	ENSGT00940000156911.i.a	ENSGT00390000015162.c.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000168127.a.a.a	ENSGT00940000157989.a.a.b.a
Common carp reference	MODERN SPECIES	17	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)	ENSCCRG00000014062	ythdf1 (ENSCCRG00000014046)
Golden-line barbel	MODERN SPECIES	15	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328	nkain5 (ENSSGRG00000030330)	ythdf1 (ENSSGRG00000030333)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2176														ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	873							ENSCARG00000058694	dffb (ENSCARG00000058726)	si:ch211-147a11.3 (ENSCARG00000058888)	b3gnt7l (ENSCARG00000058899)	CEP104 (ENSCARG00000058932)	lrrc47 (ENSCARG00000059069)	ENSCARG00000059084	mad2l2 (ENSCARG00000059105)	ENSCARG00000059158 #22	ENSCARG00000059172 #22	ENSCARG00000059200	ENSCARG00000059214	csde1 (ENSCARG00000059438)	porcnl (ENSCARG00000064562)	PDZD4 (ENSCARG00000064637)	IQSEC2 (ENSCARG00000064654)	ENSCARG00000064825	cacna1fb (ENSCARG00000064845)	sypa (ENSCARG00000065103)	samd10a (ENSCARG00000065114)	si:dkey-70p6.1 (ENSCARG00000065130)	nkain5 (ENSCARG00000065137)	ythdf1 (ENSCARG00000065145)	gid8a (ENSCARG00000065166)	dnajc5aa (ENSCARG00000065180)
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c
Goldfish	MODERN SPECIES	3327					NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a
Cyprininae_a	ANCESTRAL SPECIES	190															ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a.g	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT01030000234637.b.c.g.a	ENSGT00990000210169	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a	ENSGT00940000157989.a.a.b.b
Common carp reference	MODERN SPECIES	23	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841	samd10a (ENSCCRG00000014083)	uckl1a (ENSCCRG00000014066)
Golden-line barbel	MODERN SPECIES	383																ENSSGRG00000016691 #22	ENSSGRG00000016690	apex2 (ENSSGRG00000016689)	ENSSGRG00000016688	csde1 (ENSSGRG00000016609)	porcnl (ENSSGRG00000016558)	PDZD4 (ENSSGRG00000016554)	IQSEC2 (ENSSGRG00000016327)	ENSSGRG00000016320	cacna1fb (ENSSGRG00000012281)	sypa (ENSSGRG00000012213)	ENSSGRG00000012212	ENSSGRG00000012211	samd10a (ENSSGRG00000012210)	uckl1a (ENSSGRG00000011974)	nkain5 (ENSSGRG00000011970)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3327				NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Goldfish	MODERN SPECIES	852				ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprininae	ANCESTRAL SPECIES	1468															ENSGT00950000183126.a.p.a.a.c.b.a #22	ENSGT00950000183126.a.p.b.h.b #22
Goldfish	MODERN SPECIES	852					ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.h.b #22
Golden-line barbel	MODERN SPECIES	1310																ENSSGRG00000013948 #22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)	uckl1a (ENSDARG00000001686)	ythdf1 (ENSDARG00000016447)
Zebrafish	MODERN SPECIES	23	sypa (ENSDARG00000110528)	cacna1fb (ENSDARG00000023683)	ENSDARG00000025108	PDZD4 (ENSDARG00000098823)	IQSEC2 (ENSDARG00000102125)	porcnl (ENSDARG00000052455)	csde1 (ENSDARG00000074758)	ENSDARG00000090577	apex2 (ENSDARG00000008472)	ENSDARG00000069696	ENSDARG00000089901 #22	ENSDARG00000068966 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000092381 #22	ENSDARG00000095193 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000092892 #22	zgc:153631 (ENSDARG00000068993) #22	mad2l2 (ENSDARG00000042456)	lrrc47 (ENSDARG00000053138)	CEP104 (ENSDARG00000060361)	b3gnt7l (ENSDARG00000053133)	si:ch211-147a11.3 (ENSDARG00000069009)	dffb (ENSDARG00000009748)	ENSDARG00000069014	AJAP1 (ENSDARG00000038655)	ENSDARG00000093080	ENSDARG00000094861	ENSDARG00000094473	fhad1 (ENSDARG00000056723)	ela2 (ENSDARG00000056744)
Euteleosteomorpha	ANCESTRAL SPECIES	61	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284
Protacanthopterygii	ANCESTRAL SPECIES	186							ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000156186.k	ENSGT00940000153792.B.p	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12
Salmoninae	ANCESTRAL SPECIES	1362															ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.ub.b #22
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	266															ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a
River trout	DUPLICATION
River trout	MODERN SPECIES	20	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)
River trout	MODERN SPECIES	20	ENSSTUG00000017390	pex10 (ENSSTUG00000017395) #12	plch2a (ENSSTUG00000017430) #14	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17
Atlantic salmon	MODERN SPECIES	6	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119	tm9sf4 (ENSSSAG00000063233)	plagl2 (ENSSSAG00000098600)	pofut1 (ENSSSAG00000063159)	kif3b (ENSSSAG00000063137)
Oncorhynchus	ANCESTRAL SPECIES	534															ENSGT00950000183126.a.p.a.ub.a.a.a.b #22	ENSGT00950000183126.a.p.b.k #22
Rainbow trout	MODERN SPECIES	30	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166	ENSOMYG00000074161
Oncorhynchus_a	ANCESTRAL SPECIES	685															ENSGT00950000183126.a.p.a.tb.a.a.a #22	ENSGT00950000183126.a.p.b.k #22
Coho salmon	MODERN SPECIES	8	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759	MYT1 (ENSOKIG00005007791)
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00390000004928.z
River trout	MODERN SPECIES	20	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)	ENSSTUG00000016414	plpbp (ENSSTUG00000016373)	tmed4 (ENSSTUG00000016345)
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119	tm9sf4 (ENSSSAG00000063233)
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Chinook salmon	MODERN SPECIES	102						ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	11	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)	PCMTD2 (ENSELUG00000013754)	MYT1 (ENSELUG00000013803)
Northern pike	MODERN SPECIES	11	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)	PCMTD2 (ENSELUG00000013754)
Acanthomorphata	ANCESTRAL SPECIES	136	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Euacanthomorphacea	ANCESTRAL SPECIES	73	ENSGT00390000016496	ENSGT00390000014490	ENSGT00510000048827	ENSGT00510000048586	ENSGT00390000014794.a	ENSGT00950000183462	ENSGT00940000160122	ENSGT00900000141054	ENSGT01000000214413.b.a.b.b.a	ENSGT00390000013792	ENSGT00520000060938	ENSGT00940000159351	ENSGT00940000161002	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00950000182931.A.a.b	ENSGT01030000234578.B.b.a	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00950000182970.A.b	ENSGT00390000017394
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT01010000223737
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000156313.c.b	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT00940000177582	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Haplochromini_A	DUPLICATION
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431	ENSGT00940000158435
Zebra mbuna	DUPLICATION
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1100	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)	nadkb (ENSMZEG00005024457)
Zebra mbuna	MODERN SPECIES	1100	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)	nadkb (ENSMZEG00005024457)	ENSMZEG00005024459
Zebra mbuna	MODERN SPECIES	1102	ENSMZEG00005010589	ENSMZEG00005010565	ogt.2 (ENSMZEG00005010496)	gcna (ENSMZEG00005010480)	CETN1 (ENSMZEG00005010468)	nsdhl (ENSMZEG00005010461)	ENSMZEG00005010417	fut11 (ENSMZEG00005010400)	RAB9B (ENSMZEG00005010392)	plp1a (ENSMZEG00005010374)	pcdh20 (ENSMZEG00005010362)	si:dkey-27i16.2 (ENSMZEG00005010357)	nlgn3a (ENSMZEG00005010342)	ENSMZEG00005010313	ENSMZEG00005010287 #22	ENSMZEG00005010271 #22	eda (ENSMZEG00005010252)	ENSMZEG00005010245	ENSMZEG00005010233	GJB1 (ENSMZEG00005010215)	gja2 (ENSMZEG00005010207)	vma21 (ENSMZEG00005010195)	mtnr1c (ENSMZEG00005010186)	neurl1b (ENSMZEG00005010146)	dusp1 (ENSMZEG00005010131)	ergic1 (ENSMZEG00005010107)	flt4 (ENSMZEG00005010055)	trim105 (ENSMZEG00005010044)	npy7r (ENSMZEG00005010036)	prelid1a (ENSMZEG00005010026)	mxd3 (ENSMZEG00005010016)
Eastern happy	MODERN SPECIES	9	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)	apoda.2 (ENSACLG00000011349)	samd7 (ENSACLG00000011343)	sec62 (ENSACLG00000011336)	nadkb (ENSACLG00000011335)
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.o.a.b #22
P. nyererei	MODERN SPECIES	1370																ENSPNYG00000024180 #22
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Eastern happy	MODERN SPECIES	9	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)	apoda.2 (ENSACLG00000011349)	samd7 (ENSACLG00000011343)
Zebra mbuna	MODERN SPECIES	1100	pnhd (ENSMZEG00005024401)	admp (ENSMZEG00005024402)	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)
Lyretail cichlid	MODERN SPECIES	313	colec12 (ENSNBRG00000010246)	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)	sec62 (ENSNBRG00000011453)
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	9	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)	apoda.1 (ENSONIG00000018635)	apoda.2 (ENSONIG00000028478)	apoda.2 (ENSONIG00000018633)
Nile tilapia	MODERN SPECIES	9	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)	apoda.1 (ENSONIG00000018635)	apoda.2 (ENSONIG00000028478)	apoda.2 (ENSONIG00000018633)	samd7 (ENSONIG00000018632)	sec62 (ENSONIG00000018630)
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.o.b #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT00940000177582	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075
Haplochromini	ANCESTRAL SPECIES	2	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1100	admp (ENSMZEG00005024402)	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)
Zebra mbuna	MODERN SPECIES	1102	kctd12b (ENSMZEG00005011305)	ENSMZEG00005010589	ENSMZEG00005010565	ogt.2 (ENSMZEG00005010496)	gcna (ENSMZEG00005010480)	CETN1 (ENSMZEG00005010468)	nsdhl (ENSMZEG00005010461)	ENSMZEG00005010417	fut11 (ENSMZEG00005010400)	RAB9B (ENSMZEG00005010392)	plp1a (ENSMZEG00005010374)	pcdh20 (ENSMZEG00005010362)	si:dkey-27i16.2 (ENSMZEG00005010357)	nlgn3a (ENSMZEG00005010342)	ENSMZEG00005010313	ENSMZEG00005010287 #22	ENSMZEG00005010271 #22	eda (ENSMZEG00005010252)	ENSMZEG00005010245	ENSMZEG00005010233	GJB1 (ENSMZEG00005010215)	gja2 (ENSMZEG00005010207)	vma21 (ENSMZEG00005010195)	mtnr1c (ENSMZEG00005010186)	neurl1b (ENSMZEG00005010146)	dusp1 (ENSMZEG00005010131)	ergic1 (ENSMZEG00005010107)	flt4 (ENSMZEG00005010055)	trim105 (ENSMZEG00005010044)	npy7r (ENSMZEG00005010036)	prelid1a (ENSMZEG00005010026)
Eastern happy	MODERN SPECIES	9	EMILIN2 (ENSACLG00000013312)	adcyap1b (ENSACLG00000013303)	yes1 (ENSACLG00000013282)	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)
Burton s mouthbrooder	MODERN SPECIES	1915																ENSHBUG00000021325 #22
Lyretail cichlid	MODERN SPECIES	313	clul1 (ENSNBRG00000010221)	colec12 (ENSNBRG00000010246)	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)
Nile tilapia	MODERN SPECIES	9	adcyap1b (ENSONIG00000009205)	yes1 (ENSONIG00000032220)	clul1 (ENSONIG00000009196)	colec12 (ENSONIG00000009194)	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Nile tilapia	MODERN SPECIES	9	yes1 (ENSONIG00000032220)	clul1 (ENSONIG00000009196)	colec12 (ENSONIG00000009194)	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Burton s mouthbrooder	MODERN SPECIES	1960																ENSHBUG00000019955 #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Eastern happy	MODERN SPECIES	9	adcyap1b (ENSACLG00000013303)	yes1 (ENSACLG00000013282)	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)
Lyretail cichlid	MODERN SPECIES	313	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)	sec62 (ENSNBRG00000011453)	nadkb (ENSNBRG00000011487)
Midas cichlid	MODERN SPECIES	892																ENSACIG00000006196 #22	ENSACIG00000006189	ENSACIG00000006137	ENSACIG00000006113
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284
Cyprinodontoidei	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742
NAME_4	ANCESTRAL SPECIES	454															ENSGT00950000183126.a.p.a.h #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	81																ENSCVAG00000021242 #22
Sheepshead minnow	MODERN SPECIES	594															ENSCVAG00000006989	ENSCVAG00000007060 #22	prkcz (ENSCVAG00000007182)	skia (ENSCVAG00000007240) #7	ddost (ENSCVAG00000007282)	TMEM121B (ENSCVAG00000007289)	mkrn1 (ENSCVAG00000007296)	tmem178bb (ENSCVAG00000007312)	LRRC24 (ENSCVAG00000007316)	LONP1 (ENSCVAG00000007639)
Sheepshead minnow	MODERN SPECIES	1119														NELL1 (ENSCVAG00000000704)	ENSCVAG00000007572 #22	ENSCVAG00000007587 #22
Sheepshead minnow	MODERN SPECIES	907				ENSCVAG00000021852	ENSCVAG00000000556	tubb2b (ENSCVAG00000021868)	ENSCVAG00000021885	FKBP15 (ENSCVAG00000021919)	fgf17 (ENSCVAG00000021931)	entpd2a.1 (ENSCVAG00000000561)	nelfb (ENSCVAG00000021970)	ENSCVAG00000021986	arrdc1a (ENSCVAG00000021997)	ehmt1a (ENSCVAG00000022013)	ENSCVAG00000022029 #22	ENSCVAG00000022060 #22
Mummichog	MODERN SPECIES	385																ENSFHEG00000014308 #22	prkcz (ENSFHEG00000014264)	skia (ENSFHEG00000014257) #7
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00390000007643	ENSGT00940000154964.y.b	ENSGT00940000165284	ENSGT00940000156151	ENSGT00940000153314.b.a.a	ENSGT00390000017394	ENSGT00950000182970.A.b	ENSGT00390000013727.c	ENSGT00940000164771.b	ENSGT00520000055578.a.a.c	ENSGT00940000156364.a.b	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000160063.h	ENSGT00940000165955	ENSGT00940000156759.a.a	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00940000177283	ENSGT00940000158219.a
Poecilia	ANCESTRAL SPECIES	26	ENSGT00390000007643	ENSGT00940000154964.y.b	ENSGT00940000165284	ENSGT00940000156151	ENSGT00940000153314.b.a.a	ENSGT00390000017394	ENSGT00950000182970.A.b	ENSGT00390000013727.c	ENSGT00940000164771.b	ENSGT00520000055578.a.a.c	ENSGT00940000156364.a.b	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000160063.h	ENSGT00940000165955	ENSGT00940000156759.a.a	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00940000177283	ENSGT00940000158219.a
NAME_6	ANCESTRAL SPECIES	508													ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.b #22
Amazon molly	MODERN SPECIES	505													skia (ENSPFOG00000014560) #7	ENSPFOG00000021808	prkcz (ENSPFOG00000014668)	ENSPFOG00000014747 #22	ENSPFOG00000023026	tmem82 (ENSPFOG00000014760)	ENSPFOG00000024806	SPEN (ENSPFOG00000014768)	ENSPFOG00000014859	fam131c (ENSPFOG00000015111)	clcnk (ENSPFOG00000015118)	hspb7 (ENSPFOG00000015177)	ZBTB17 (ENSPFOG00000015192)	ddost (ENSPFOG00000015244)	plekhm2 (ENSPFOG00000015306)	ENSPFOG00000015405	ARHGEF19 (ENSPFOG00000015575)	ENSPFOG00000015629	ENSPFOG00000023253
Sailfin molly	MODERN SPECIES	1287														skia (ENSPLAG00000018512) #7	prkcz (ENSPLAG00000018493)	ENSPLAG00000018419 #22
Guppy	MODERN SPECIES	459	si:dkeyp-104h9.5 (ENSPREG00000008812)	phc2a (ENSPREG00000008796)	ENSPREG00000008753	rcc2 (ENSPREG00000008729)	rpl22 (ENSPREG00000008671)	icmt (ENSPREG00000008641)	rtel1 (ENSPREG00000008595)	mfn2 (ENSPREG00000008521)	ENSPREG00000008508	ENSPREG00000008490	ENSPREG00000008330	porcnl (ENSPREG00000008284)	suv39h1b (ENSPREG00000008274)	ENSPREG00000008246	ENSPREG00000006872	ENSPREG00000006611 #22	prkcz (ENSPREG00000006532)	skia (ENSPREG00000006492) #7	si:ch211-251b21.1 (ENSPREG00000006446) #17	plch2a (ENSPREG00000006383) #14	pex10 (ENSPREG00000006359) #12	stk38a (ENSPREG00000006334)	dennd2da (ENSPREG00000006264)	ENSPREG00000006243	renbp (ENSPREG00000006197)	ENSPREG00000006157	rpl10 (ENSPREG00000006075)	FLNA (ENSPREG00000005812)	ENSPREG00000005751	MRPL49 (ENSPREG00000005735)	ENSPREG00000005714
Platyfish	MODERN SPECIES		tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)	dennd2da (ENSXMAG00000004839)	ENSXMAG00000004838	renbp (ENSXMAG00000004821)	ENSXMAG00000004811	rpl10 (ENSXMAG00000004788)	FLNA (ENSXMAG00000004665)	ENSXMAG00000029296
Aplocheiloidei	ANCESTRAL SPECIES	60	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000003937	ENSGT00390000017253	ENSGT00390000014785	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284	ENSGT00940000154964.y.b
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	627														ENSKMAG00000010683	ENSKMAG00000010658 #22	ENSKMAG00000010636 #22	prkcz (ENSKMAG00000010610)
Mangrove rivulus	MODERN SPECIES	439															large2 (ENSKMAG00000012626)	ENSKMAG00000012714 #22	zgc:194679 (ENSKMAG00000012753)
Oryzias	ANCESTRAL SPECIES	45	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Oryzias_b	ANCESTRAL SPECIES	48	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	616															ENSOMEG00000011646 #22	ENSOMEG00000011630 #22	prkcz (ENSOMEG00000011568)	ENSOMEG00000011369	ENSOMEG00000011361 #7	ENSOMEG00000011344
Indian medaka	MODERN SPECIES	392	ENSOMEG00000006771	suv39h1b (ENSOMEG00000006743)	gpr173 (ENSOMEG00000006708)	porcnl (ENSOMEG00000006697)	ENSOMEG00000000157	ENSOMEG00000006654	kcnab2b (ENSOMEG00000022219)	ENSOMEG00000022129	dedd (ENSOMEG00000022107)	tnnc1b (ENSOMEG00000022055)	nppal (ENSOMEG00000021994)	ENSOMEG00000021967	ENSOMEG00000021946	ARHGEF10L (ENSOMEG00000021907)	igsf21b (ENSOMEG00000021699)	ENSOMEG00000021674 #22
Javanese ricefish	MODERN SPECIES	21	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)	LRRC38 (ENSOJAG00000010413)	mthfr (ENSOJAG00000009657)
Oryzias_a	ANCESTRAL SPECIES	54	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128	ENSGT01030000234637.b.c.g
Japanese Medaka HdrR	MODERN SPECIES	21	kcnd1 (ENSORLG00000018330)	ENSORLG00000018299	mfn2 (ENSORLG00000025366)	ENSORLG00000023957	ENSORLG00000026958	dedd (ENSORLG00000024196)	tnnc1b (ENSORLG00000019408)	ENSORLG00000027984	nppal (ENSORLG00000025996)	nppb (ENSORLG00000027335)	ENSORLG00000024366	ENSORLG00000027273	ENSORLG00000009359	igsf21b (ENSORLG00000016826)	ENSORLG00000016829 #22	ENSORLG00000024029 #22	prkcz (ENSORLG00000016850)	ENSORLG00000024678	skia (ENSORLG00000016855) #7	ENSORLG00000022931	si:ch211-251b21.1 (ENSORLG00000016860) #17	ENSORLG00000028134	plch2a (ENSORLG00000016877) #14	ENSORLG00000029302	pex10 (ENSORLG00000016884) #12	ENSORLG00000016889	renbp (ENSORLG00000016904)	ENSORLG00000027554	ENSORLG00000016906	dennd2da (ENSORLG00000020542)	stk38a (ENSORLG00000016924)
Chinese medaka	MODERN SPECIES	49								ENSOSIG00000000580	KCNAB2 (ENSOSIG00000000572)	dedd (ENSOSIG00000000567)	tnnc1b (ENSOSIG00000000566)	nppal (ENSOSIG00000000565)	ENSOSIG00000000563	igsf21b (ENSOSIG00000000066)	ENSOSIG00000000054 #22	ENSOSIG00000015359 #22	prkcz (ENSOSIG00000015178)	ENSOSIG00000015177	skia (ENSOSIG00000015175) #7	plch2a (ENSOSIG00000015125) #14	ENSOSIG00000015112	renbp (ENSOSIG00000015062)	ENSOSIG00000015060	ENSOSIG00000015058	dennd2da (ENSOSIG00000015057)	stk38a (ENSOSIG00000015049)	ENSOSIG00000015046	ENSOSIG00000015044
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Carangaria_A	ANCESTRAL SPECIES	55															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Seriola	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a.jb.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Greater amberjack	DUPLICATION
Greater amberjack	MODERN SPECIES	134															ENSSDUG00000002783 #22	ENSSDUG00000002761 #22	prkcz (ENSSDUG00000002703)	skia (ENSSDUG00000002658) #7	ENSSDUG00000002639	si:ch211-251b21.1 (ENSSDUG00000002623) #17	plch2a (ENSSDUG00000002588) #14	pex10 (ENSSDUG00000002561) #12	renbp (ENSSDUG00000002522)	ENSSDUG00000002508	ENSSDUG00000002491	dennd2da (ENSSDUG00000002435)	stk38a (ENSSDUG00000002369)	MTCH1 (ENSSDUG00000002338)	stk35 (ENSSDUG00000002332)	pdyn (ENSSDUG00000002320)	GMEB2 (ENSSDUG00000002314)
Greater amberjack	MODERN SPECIES	345																ENSSDUG00000023835 #22
Yellowtail amberjack	MODERN SPECIES	2883	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)	pdyn (ENSSLDG00000017106)	GMEB2 (ENSSLDG00000017090)
Barramundi perch	MODERN SPECIES	429															ENSLCAG00010001117 #22	ENSLCAG00010001110 #22	prkcz (ENSLCAG00010000953)	skia (ENSLCAG00010000872) #7
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)	ENSMAMG00000014860	GMEB2 (ENSMAMG00000026746)
Anabantoidei	ANCESTRAL SPECIES	84															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009219	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010022090	tpk2 (ENSSAUG00010022091)	ENSSAUG00010022093	ENSSAUG00010022094	GMEB2 (ENSSAUG00010022097)	pdyn (ENSSAUG00010022098)	ENSSAUG00010022100	ENSSAUG00010022102	stk35 (ENSSAUG00010022103)	MTCH1 (ENSSAUG00010022104)	ENSSAUG00010022111	dedd (ENSSAUG00010022825)	ENSSAUG00010022826	kcnab2b (ENSSAUG00010022828)	ENSSAUG00010022841 #22	ENSSAUG00010022843 #22	prkcz (ENSSAUG00010022848)	ENSSAUG00010022906	ENSSAUG00010022908	skia (ENSSAUG00010022911) #7	ENSSAUG00010022917	ENSSAUG00010022920	si:ch211-251b21.1 (ENSSAUG00010022930) #17	plch2a (ENSSAUG00010022935) #14	pex10 (ENSSAUG00010022946) #12	renbp (ENSSAUG00010022948)	ENSSAUG00010022949	ENSSAUG00010022950	rpl10 (ENSSAUG00010022951)	FLNA (ENSSAUG00010000588)	ENSSAUG00010001454
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
European seabass	DUPLICATION
European seabass	MODERN SPECIES	14	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953	stk35 (ENSDLAG00005020931)
European seabass	MODERN SPECIES	14	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953
Perciformes	ANCESTRAL SPECIES	4	ENSGT00390000013740	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00950000183126.a.p.b #22	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00940000159012	ENSGT00390000004928	ENSGT00510000046985.o	ENSGT00940000167283.a	ENSGT00940000157472	ENSGT00940000156364.a.a
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00990000203742	ENSGT00940000178358	ENSGT00390000013740	ENSGT00510000048446 #12	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00950000183126.a.p.b #22	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00940000159012	ENSGT00390000004928	ENSGT00510000046985.o	ENSGT00940000167283.a	ENSGT00940000157472	ENSGT00940000156364.a.a
Channel bull blenny	MODERN SPECIES	21	ENSCGOG00000015988	ENSCGOG00000015985	igsf21b (ENSCGOG00000015981)	VPS13D (ENSCGOG00000015582)	pex10 (ENSCGOG00000015552) #12	ENSCGOG00000015541 #17	ENSCGOG00000015539 ##29	skia (ENSCGOG00000015530) #7	prkcz (ENSCGOG00000013939)	ENSCGOG00000013902	rpl10 (ENSCGOG00000013893)	FLNA (ENSCGOG00000000997)	NINJ1 (ENSCGOG00000023905)	MRPL49 (ENSCGOG00000023902)	ENSCGOG00000023901	ENSCGOG00000023898 #22	ENSCGOG00000023896	atp2b3a (ENSCGOG00000020968)	ccnq (ENSCGOG00000020710)	ENSCGOG00000020705	zgc:101663 (ENSCGOG00000020702)	ap4b1 (ENSCGOG00000020692)	sephs3 (ENSCGOG00000020679)	ikbkg (ENSCGOG00000020664)	tmed4 (ENSCGOG00000020646)	plpbp (ENSCGOG00000020621)	snrpg (ENSCGOG00000020620)	ENSCGOG00000020619	TBC1D22B (ENSCGOG00000020228)	ENSCGOG00000020211	PCMTD2 (ENSCGOG00000020209)
Pike perch	MODERN SPECIES	102	ENSSLUG00000016461 #17	skia (ENSSLUG00000016443) #7	prkcz (ENSSLUG00000015208)	ENSSLUG00000015143 #22	ENSSLUG00000015139	ENSSLUG00000015133 #22	ENSSLUG00000015107 #22	ENSSLUG00000015088 #22	ENSSLUG00000015069	rpl10 (ENSSLUG00000015039)	FLNA (ENSSLUG00000013362)	emd (ENSSLUG00000013241)	ENSSLUG00000013239	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013236	ENSSLUG00000013229 #22	ENSSLUG00000013223	ENSSLUG00000013219	atp2b3b (ENSSLUG00000013076)	ccnq (ENSSLUG00000013050)	cfap126 (ENSSLUG00000013045)	zgc:101663 (ENSSLUG00000013044)	ap4b1 (ENSSLUG00000013003)	sephs3 (ENSSLUG00000012992)
Cottioidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Lumpfish	MODERN SPECIES	22	MTCH1 (ENSCLMG00005000614)	dennd2da (ENSCLMG00005000603)	ENSCLMG00005000601	renbp (ENSCLMG00005000583)	pex10 (ENSCLMG00005000580) #12	plch2a (ENSCLMG00005000378) #14	si:ch211-251b21.1 (ENSCLMG00005000200) #17	ENSCLMG00005000162	skia (ENSCLMG00005000147) #7	prkcz (ENSCLMG00005000120)	ENSCLMG00005021337	rpl10 (ENSCLMG00005021325)	NINJ1 (ENSCLMG00005021207)	ENSCLMG00005021206	MRPL49 (ENSCLMG00005021205)	ENSCLMG00005021203 #22	ENSCLMG00005021202	ENSCLMG00005021201	ENSCLMG00005021149	ccnq (ENSCLMG00005021136)	ENSCLMG00005021133	ENSCLMG00005021132	ap4b1 (ENSCLMG00005021125)	sephs3 (ENSCLMG00005021118)	ikbkg (ENSCLMG00005021114)	tmed4 (ENSCLMG00005021105)	plpbp (ENSCLMG00005021097)	snrpg (ENSCLMG00005021094)	ENSCLMG00005021093	TBC1D22B (ENSCLMG00005021089)	TNNC1 (ENSCLMG00005021088)
Stickleback	MODERN SPECIES	11	snrpg (ENSGACG00000013201)	plpbp (ENSGACG00000013198)	tmed4 (ENSGACG00000013176)	ikbkg (ENSGACG00000013173)	sephs3 (ENSGACG00000013165)	ENSGACG00000013164	ap4b1 (ENSGACG00000013155)	zgc:101663 (ENSGACG00000013153)	ccnq (ENSGACG00000013143)	atp2b3a (ENSGACG00000013136)	ENSGACG00000022584	ENSGACG00000013130	MRPL49 (ENSGACG00000013129)	MRPL49 (ENSGACG00000013127)	ENSGACG00000013125	ENSGACG00000013117 #22	ENSGACG00000013110	ENSGACG00000013103	FLNA (ENSGACG00000013098)	rpl10 (ENSGACG00000013073)	ENSGACG00000013035	prkcz (ENSGACG00000013018)	ENSGACG00000013016	ENSGACG00000013014	skia (ENSGACG00000013007) #7	ENSGACG00000013002 #17	plch2a (ENSGACG00000012997) #14	tnnc1b (ENSGACG00000012954)	efhd2 (ENSGACG00000012943)	dedd (ENSGACG00000012937)	ENSGACG00000012890
Pinecone sodierfish	MODERN SPECIES	21	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)	icmt (ENSMMDG00005000845)	ENSMMDG00005000847
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000014315	ENSGMOG00000024232	ENSGMOG00000014290	ENSGMOG00000027071	ENSGMOG00000014162	CHDH (ENSGMOG00000014137)	ENSGMOG00000014124	ENSGMOG00000014098	ENSGMOG00000014092	ENSGMOG00000029642	ENSGMOG00000017239	NDUFA4L2 (ENSGMOG00000016339)	ENSGMOG00000016346	NXPH4 (ENSGMOG00000020361)	ENSGMOG00000016491 #22	ENSGMOG00000022157 #22	ENSGMOG00000023496	tas1r1 (ENSGMOG00000014726)	ENSGMOG00000026897 #16	ENSGMOG00000014843 #16	her4.1 (ENSGMOG00000026079)	ENSGMOG00000014884	ENSGMOG00000015102	ENSGMOG00000034917	ENSGMOG00000015151	ENSGMOG00000015178	ppih (ENSGMOG00000015194)	ybx1 (ENSGMOG00000035560)	arhgef16 (ENSGMOG00000015237)	espn (ENSGMOG00000015276)	HES2 (ENSGMOG00000015330)
Cod	MODERN SPECIES		ENSGMOG00000028119	ENSGMOG00000014315	ENSGMOG00000024232	ENSGMOG00000014290	ENSGMOG00000027071	ENSGMOG00000014162	CHDH (ENSGMOG00000014137)	ENSGMOG00000014124	ENSGMOG00000014098	ENSGMOG00000014092	ENSGMOG00000029642	ENSGMOG00000017239	NDUFA4L2 (ENSGMOG00000016339)	ENSGMOG00000016346	NXPH4 (ENSGMOG00000020361)	ENSGMOG00000016491 #22	ENSGMOG00000022157 #22	ENSGMOG00000023496	tas1r1 (ENSGMOG00000014726)	ENSGMOG00000026897 #16	ENSGMOG00000014843 #16	her4.1 (ENSGMOG00000026079)	ENSGMOG00000014884	ENSGMOG00000015102	ENSGMOG00000034917	ENSGMOG00000015151	ENSGMOG00000015178	ppih (ENSGMOG00000015194)	ybx1 (ENSGMOG00000035560)	arhgef16 (ENSGMOG00000015237)	espn (ENSGMOG00000015276)
Cod	MODERN SPECIES		zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518	ENSGMOG00000003528	ENSGMOG00000003541
Osteoglossiformes	ANCESTRAL SPECIES	727															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683	ENSSFOG00015031584	ENSSFOG00015007420	ENSSFOG00015026948	ENSSFOG00015026400	ENSSFOG00015000208	ENSSFOG00015025968	ENSSFOG00015029436
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535	ENSSFOG00015031739	ENSSFOG00015031901	ENSSFOG00015024991	ENSSFOG00015032979	ENSSFOG00015024723	ENSSFOG00015030654	ENSSFOG00015030335	ENSSFOG00015021340
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10	ENSSFOG00015009822 #17	plch2a (ENSSFOG00015009883) #14
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	37															ENSPKIG00000014581 #22	ENSPKIG00000014549 #22	ENSPKIG00000014478 #22	prkcz (ENSPKIG00000014407)	skia (ENSPKIG00000014364) #7	ENSPKIG00000014336 #17	ENSPKIG00000014315	pex10 (ENSPKIG00000014293) #12	mthfr (ENSPKIG00000014252)	CLCN6 (ENSPKIG00000014156)	ENSPKIG00000014121	ENSPKIG00000014100	nppal (ENSPKIG00000014077)	ENSPKIG00000014051	si:dkeyp-104h9.5 (ENSPKIG00000014031)	plod1a (ENSPKIG00000013959)	mfn2 (ENSPKIG00000013870)
P. kingsleyae	MODERN SPECIES	735												PLCD3 (ENSPKIG00000003226)	acbd4 (ENSPKIG00000003043)	hexim1 (ENSPKIG00000002959)	ENSPKIG00000002939 #22	ENSPKIG00000002916 #22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Spotted gar	MODERN SPECIES	664	TMEM52 (ENSLOCG00000006109)	CFAP74 (ENSLOCG00000006094)	GABRD (ENSLOCG00000006079)	ENSLOCG00000006064	ENSLOCG00000006048	ENSLOCG00000006021	NPHP4 (ENSLOCG00000005969)	dffb (ENSLOCG00000005950)	b3gnt7l (ENSLOCG00000018085)	CEP104 (ENSLOCG00000005920)	lrrc47 (ENSLOCG00000005902)	SMIM1 (ENSLOCG00000005888)	mad2l2 (ENSLOCG00000005872)	ENSLOCG00000005857	zgc:153631 (ENSLOCG00000005841) #22	ENSLOCG00000005819 #22	prkcz (ENSLOCG00000005744)	skia (ENSLOCG00000005728) #7	MORN1 (ENSLOCG00000005712) #10	si:ch211-251b21.1 (ENSLOCG00000005680) #17	plch2a (ENSLOCG00000005648) #14	pex10 (ENSLOCG00000005635) #12	mthfr (ENSLOCG00000005606)	CLCN6 (ENSLOCG00000005577)	nppb (ENSLOCG00000005558)	ENSLOCG00000005537	nppal (ENSLOCG00000005514)	ENSLOCG00000005508	si:dkeyp-104h9.5 (ENSLOCG00000005478)	plod1a (ENSLOCG00000005408)	mfn2 (ENSLOCG00000005375)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Bicolor damselfish	MODERN SPECIES	250	cacna2d2a (ENSSPAG00000006287)	abhd14b (ENSSPAG00000006268)	mst1 (ENSSPAG00000006083)	ENSSPAG00000006053	C3orf18 (ENSSPAG00000006023)	gnb1b (ENSSPAG00000005965)	tardbpb (ENSSPAG00000005946)	cenps (ENSSPAG00000005934)	rbp7b (ENSSPAG00000005924)	H6PD (ENSSPAG00000005914) #24	epha2a (ENSSPAG00000005894)	HSPB7 (ENSSPAG00000005881)	cplane2 (ENSSPAG00000005846)	ENSSPAG00000005836	ddi2 (ENSSPAG00000005793)	ENSSPAG00000005777 #22	ENSSPAG00000005761 ##22	arl8ba (ENSSPAG00000005746)	edem1 (ENSSPAG00000005711)	ENSSPAG00000005694
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1801								ENSCMIG00000012309	ENSCMIG00000012305	ENSCMIG00000012303	ENSCMIG00000012292	col2a1b (ENSCMIG00000012240)	tmem106c (ENSCMIG00000012224)	vdrb (ENSCMIG00000012222)	spryd4 (ENSCMIG00000012219)	ENSCMIG00000012215 #22	ENSCMIG00000012214	ENSCMIG00000012212	ENSCMIG00000012208	ENSCMIG00000012205	csad (ENSCMIG00000012088)	ENSCMIG00000012028	ENSCMIG00000012025	ENSCMIG00000012021
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1040																ENSCMIG00000000874 #22
Elephant shark	MODERN SPECIES	552																ENSCMIG00000001974 #22
Elephant shark	MODERN SPECIES	1668	agmat (ENSCMIG00000007826)	pink1 (ENSCMIG00000007846)	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311
Elephant shark	MODERN SPECIES	1668	pink1 (ENSCMIG00000007846)	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311	GABRD (ENSCMIG00000008313)
Elephant shark	MODERN SPECIES	1668	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311	GABRD (ENSCMIG00000008313)	ENSCMIG00000008317