Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183126.a #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183126.a #22
Sarcopterygii	ANCESTRAL SPECIES	39																ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00940000165571	ENSGT00440000038972	ENSGT00940000154171.B
Tetrapoda	ANCESTRAL SPECIES	18	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190 #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00440000038972	ENSGT00940000154171.B	ENSGT00520000060291
Anura	ANCESTRAL SPECIES	14	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a.k	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.c.a.a.b #18	ENSGT00940000163190.c.a.a.a #16	ENSGT00950000183126.a #22	ENSGT00530000063435.b #24	ENSGT00390000012992 #25	ENSGT00940000156846 #26	ENSGT00940000160409 #27	ENSGT00950000182805.a.a.a.b #28	ENSGT00950000182805.a.a.a.a.a ##28	ENSGT00940000153615.a.a.a #30	ENSGT00940000160830 #32	ENSGT00390000010057	ENSGT00940000157635 #34	ENSGT00390000003618	ENSGT00390000017652	ENSGT00990000207345 #35	ENSGT00940000163056 #36	ENSGT00940000158337 #37
Frog	DUPLICATION
Frog	MODERN SPECIES	7	ski (ENSXETG00000015978) #7	ENSXETG00000044493 #8	ENSXETG00000045927 #9	morn1 (ENSXETG00000012097) #10	rer1 (ENSXETG00000027904) #11	pex10 (ENSXETG00000036482) #12	ENSXETG00000048923 #13	plch2 (ENSXETG00000012092) #14	pank4 (ENSXETG00000012083) #15	hes5.2 (ENSXETG00000042581) #16	grik5-like.1 (ENSXETG00000012091) #17	hes5.1 (ENSXETG00000040903) #18	ENSXETG00000049388 #19	ENSXETG00000048324 #20	ENSXETG00000037213 #21	tnfrsf14 (ENSXETG00000035588) #22	SPSB1 (ENSXETG00000035671) #23	h6pd (ENSXETG00000012078) #24	gpr157 (ENSXETG00000026559) #25	slc2a5 (ENSXETG00000011901) #26	ca6 (ENSXETG00000038646) #27	eno1 (ENSXETG00000011897) #28	ENSXETG00000041598 #29	rere (ENSXETG00000011890) #30	ENSXETG00000046088 #31	samd11 (ENSXETG00000032993) #32	noc2l (ENSXETG00000031054) #33	klhl17 (ENSXETG00000020253) #34	perm1 (ENSXETG00000035969) #35	hes4 (ENSXETG00000001769) #36	agrn (ENSXETG00000001763) #37
Frog	MODERN SPECIES	7	mxra8 (ENSXETG00000011119)	ENSXETG00000043776 ##13	dvl1 (ENSXETG00000011120)	cptp (ENSXETG00000011136)	ints11 (ENSXETG00000030716)	XB5721641 [provisional:lpar6] (ENSXETG00000011125)	sgf29 (ENSXETG00000011145)	acap3 (ENSXETG00000001021)	ENSXETG00000001030	pla2g2e (ENSXETG00000025326)	scnn1d (ENSXETG00000001026)	ube2j2 (ENSXETG00000036215)	c1qtnf12 (ENSXETG00000001035)	b3galt6 (ENSXETG00000045861)	sdf4 (ENSXETG00000001037)	ENSXETG00000036024 ##22	ENSXETG00000001040	znf177 (ENSXETG00000040989)	ENSXETG00000030249	ENSXETG00000001042	ENSXETG00000047340 ##9	ENSXETG00000042181	XB5846730 [provisional:nnmt] (ENSXETG00000043987)	ilvbl (ENSXETG00000004732)	ENSXETG00000039423	ENSXETG00000039642	zbtb40 (ENSXETG00000004737)	wnt4 (ENSXETG00000004742)	cdc42 (ENSXETG00000004743)	ap5b1 (ENSXETG00000004744)	c1orf50 (ENSXETG00000012074)
Leishan spiny toad	MODERN SPECIES	2	RCN2 (ENSLLEG00000015488)	TNFRSF9 (ENSLLEG00000015942)	SKI (ENSLLEG00000016156) #7	ENSLLEG00000016268	ENSLLEG00000016290	ENSLLEG00000016309	ENSLLEG00000016322 #13	MORN1 (ENSLLEG00000016340) #10	RER1 (ENSLLEG00000016480) #11	PEX10 (ENSLLEG00000016615) #12	PLCH2 (ENSLLEG00000016724) #14	ENSLLEG00000017844 #17	PANK4 (ENSLLEG00000018015) #15	ENSLLEG00000019106 #18	ENSLLEG00000019148 #16	ENSLLEG00000019210 #22	ENSLLEG00000008414	SPSB1 (ENSLLEG00000008476) #23	H6PD (ENSLLEG00000008566) #24	GPR157 (ENSLLEG00000008639) #25	SLC2A5 (ENSLLEG00000008695) #26	CA6 (ENSLLEG00000009024) #27	ENSLLEG00000009168 ##28	RERE (ENSLLEG00000009830) #30	SAMD11 (ENSLLEG00000010911) #32	NOC2L (ENSLLEG00000011332)	KLHL17 (ENSLLEG00000011466) #34	PLEKHN1 (ENSLLEG00000011766)	ENSLLEG00000011876	ENSLLEG00000011920	HES4 (ENSLLEG00000011946) #36
Amniota	ANCESTRAL SPECIES	202															ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161
Sauria	ANCESTRAL SPECIES	19	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429	ENSGT00940000154171.B
Archosauria	ANCESTRAL SPECIES	21	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000162566	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b	ENSGT00390000013405
Aves	ANCESTRAL SPECIES	27	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
African ostrich	MODERN SPECIES	499	GNB1 (ENSSCUG00000007532)	TMEM52 (ENSSCUG00000007534)	CFAP74 (ENSSCUG00000007539)	GABRD (ENSSCUG00000007544)	PRKCZ (ENSSCUG00000007549)	ENSSCUG00000007551	SKI (ENSSCUG00000007554) #7	RER1 (ENSSCUG00000007569) #11	PEX10 (ENSSCUG00000007572) #12	PLCH2 (ENSSCUG00000007579) #14	ENSSCUG00000007595 #17	PANK4 (ENSSCUG00000007621) #15	HES5 (ENSSCUG00000007663)	ENSSCUG00000007665 #16	ENSSCUG00000007669 #16	ENSSCUG00000007672 #22	MMEL1 (ENSSCUG00000007681)	TTC34 (ENSSCUG00000007694)	ENSSCUG00000007697	ENSSCUG00000007700	ARHGEF16 (ENSSCUG00000007714)	MEGF6 (ENSSCUG00000007729)	TPRG1L (ENSSCUG00000007750)	WRAP73 (ENSSCUG00000003941)	TP73 (ENSSCUG00000003942)	ENSSCUG00000003945	LRRC47 (ENSSCUG00000003949)	CEP104 (ENSSCUG00000003952)	DFFB (ENSSCUG00000003954)	ENSSCUG00000003955	AJAP1 (ENSSCUG00000003957)
Neognathae	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT01000000214413.b.a.b.b.b	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00530000063489.b	ENSGT00390000013405	ENSGT00390000014490	ENSGT00390000016496
Golden eagle	MODERN SPECIES	22	GNB1 (ENSACCG00020011460)	TMEM52 (ENSACCG00020004021)	CFAP74 (ENSACCG00020004000)	GABRD (ENSACCG00020003979)	PRKCZ (ENSACCG00020003958)	ENSACCG00020003938	SKI (ENSACCG00020003930) #7	RER1 (ENSACCG00020003911) #11	PEX10 (ENSACCG00020003870) #12	PLCH2 (ENSACCG00020003849) #14	ENSACCG00020003820 #17	PANK4 (ENSACCG00020003810) #15	HES5 (ENSACCG00020003795)	ENSACCG00020003782 #16	ENSACCG00020003770 #16	ENSACCG00020003726 #22	MMEL1 (ENSACCG00020003566)	ENSACCG00020003411	ENSACCG00020003398	ENSACCG00020003389	PRDM16 (ENSACCG00020003329)	ARHGEF16 (ENSACCG00020003264)	MEGF6 (ENSACCG00020003162)	TPRG1L (ENSACCG00020003113)	WRAP73 (ENSACCG00020003094)	TP73 (ENSACCG00020002966)	LRRC47 (ENSACCG00020002851)	CEP104 (ENSACCG00020002813)	DFFB (ENSACCG00020002734)	C1orf174 (ENSACCG00020002720)	AJAP1 (ENSACCG00020002704)
Australian saltwater crocodile	MODERN SPECIES	45	CFAP74 (ENSCPRG00005012916)	GABRD (ENSCPRG00005012905)	PRKCZ (ENSCPRG00005012886)	ENSCPRG00005012875	SKI (ENSCPRG00005012873) #7	MORN1 (ENSCPRG00005012860) #10	RER1 (ENSCPRG00005012853) #11	PEX10 (ENSCPRG00005012846) #12	ENSCPRG00005012841	PLCH2 (ENSCPRG00005012713) #14	ENSCPRG00005012687 #17	PANK4 (ENSCPRG00005012645) #15	HES5 (ENSCPRG00005012644)	ENSCPRG00005012638 #16	ENSCPRG00005012630 #16	ENSCPRG00005012627 #22	PRXL2B (ENSCPRG00005012623)	MMEL1 (ENSCPRG00005012585)	TTC34 (ENSCPRG00005012574)	ENSCPRG00005012564	ENSCPRG00005012561	ENSCPRG00005012556	PRDM16 (ENSCPRG00005012448)	ARHGEF16 (ENSCPRG00005012418)	MEGF6 (ENSCPRG00005012388)	ENSCPRG00005012377	WRAP73 (ENSCPRG00005012374)	TPRG1L (ENSCPRG00005012371)	TP73 (ENSCPRG00005012358)	ENSCPRG00005012351	ENSCPRG00005012346
Cryptodira	ANCESTRAL SPECIES	24	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b
Testudinoidea	ANCESTRAL SPECIES	20	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00390000012265	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00990000205429
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00390000012265	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00930000152248	ENSGT00940000154171.B
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2440									PLCH2 (ENSCABG00000018762) #14	ENSCABG00000018757 #17	PANK4 (ENSCABG00000018338) #15	HES5 (ENSCABG00000018332)	ENSCABG00000018328 #16	ENSCABG00000018326 #16	ENSCABG00000018324 #22	ENSCABG00000018318 #22	ENSCABG00000018315	MMEL1 (ENSCABG00000018300)	TTC34 (ENSCABG00000018293)	ENSCABG00000018289	ACTRT2 (ENSCABG00000018288)	ENSCABG00000018287	ENSCABG00000018286	PRDM16 (ENSCABG00000018281)	ARHGEF16 (ENSCABG00000018280)	MEGF6 (ENSCABG00000018275)	TPRG1L (ENSCABG00000018268)	WRAP73 (ENSCABG00000018264)	TP73 (ENSCABG00000018237)	ENSCABG00000018228	SMIM1 (ENSCABG00000018225)
Abingdon island giant tortoise	MODERN SPECIES	2440										PLCH2 (ENSCABG00000018762) #14	ENSCABG00000018757 #17	PANK4 (ENSCABG00000018338) #15	HES5 (ENSCABG00000018332)	ENSCABG00000018328 #16	ENSCABG00000018326 #16	ENSCABG00000018324 #22	ENSCABG00000018318 #22	ENSCABG00000018315	MMEL1 (ENSCABG00000018300)	TTC34 (ENSCABG00000018293)	ENSCABG00000018289	ACTRT2 (ENSCABG00000018288)	ENSCABG00000018287	ENSCABG00000018286	PRDM16 (ENSCABG00000018281)	ARHGEF16 (ENSCABG00000018280)	MEGF6 (ENSCABG00000018275)	TPRG1L (ENSCABG00000018268)	WRAP73 (ENSCABG00000018264)	TP73 (ENSCABG00000018237)	ENSCABG00000018228
Goode s thornscrub tortoise	MODERN SPECIES	9	CALML6 (ENSGEVG00005015332)	TMEM52 (ENSGEVG00005015361)	GABRD (ENSGEVG00005015409)	PRKCZ (ENSGEVG00005015473)	ENSGEVG00005015552	SKI (ENSGEVG00005015579) #7	MORN1 (ENSGEVG00005015689) #10	RER1 (ENSGEVG00005015816) #11	PEX10 (ENSGEVG00005015844) #12	PLCH2 (ENSGEVG00005015960) #14	ENSGEVG00005016555 #17	PANK4 (ENSGEVG00005016583) #15	HES5 (ENSGEVG00005016617)	ENSGEVG00005016678 #16	ENSGEVG00005016710 #16	ENSGEVG00005016770 #22	ENSGEVG00005016839	MMEL1 (ENSGEVG00005016915)	TTC34 (ENSGEVG00005017278)	ENSGEVG00005017358	ACTRT2 (ENSGEVG00005017371)	ENSGEVG00005017385	ENSGEVG00005017392	PRDM16 (ENSGEVG00005017412)	ARHGEF16 (ENSGEVG00005017484)	MEGF6 (ENSGEVG00005017570)	TPRG1L (ENSGEVG00005017833)	WRAP73 (ENSGEVG00005017862)	ENSGEVG00005017886	TP73 (ENSGEVG00005017919)	ENSGEVG00005017964
Emydidae	ANCESTRAL SPECIES	23	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00390000010531	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000162911	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00520000060291	ENSGT00530000063489.b
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	10					ENSCPBG00000021365	ENSCPBG00000021395 #7	MORN1 (ENSCPBG00000021412) #10	RER1 (ENSCPBG00000021418) #11	PEX10 (ENSCPBG00000021422) #12	PLCH2 (ENSCPBG00000021426) #14	ENSCPBG00000021442 #17	PANK4 (ENSCPBG00000021446) #15	HES5 (ENSCPBG00000021450)	ENSCPBG00000021453 #16	ENSCPBG00000021455 #16	ENSCPBG00000021457 #22	ENSCPBG00000021459	MMEL1 (ENSCPBG00000021462)	TTC34 (ENSCPBG00000021474)	ENSCPBG00000021480	ACTRT2 (ENSCPBG00000021482)	ENSCPBG00000021484	PRDM16 (ENSCPBG00000021485)	ARHGEF16 (ENSCPBG00000021495)	MEGF6 (ENSCPBG00000021496)	ENSCPBG00000021498	ENSCPBG00000021501	PRDM2 (ENSCPBG00000021503)	ENSCPBG00000021505	LRRC38 (ENSCPBG00000021506)	ENSCPBG00000021507
painted turtle	MODERN SPECIES	1644																ENSCPBG00000008346 #22
Chinese turtle	MODERN SPECIES	1192	MRPL20 (ENSPSIG00000003939)	ENSPSIG00000003943	ANKRD65 (ENSPSIG00000003948)	CCNL2 (ENSPSIG00000003952)	ENSPSIG00000003957	AURKAIP1 (ENSPSIG00000003963)	MORN1 (ENSPSIG00000003969) #10	RER1 (ENSPSIG00000003973) #11	PEX10 (ENSPSIG00000003982) #12	PLCH2 (ENSPSIG00000003988) #14	ENSPSIG00000003997 #17	PANK4 (ENSPSIG00000004017) #15	HES5 (ENSPSIG00000004046)	ENSPSIG00000004058 #16	ENSPSIG00000004060 #16	ENSPSIG00000004072 #22	ENSPSIG00000004078	TTC34 (ENSPSIG00000004087)	ENSPSIG00000001325	ACTRT2 (ENSPSIG00000000593)	PRDM16 (ENSPSIG00000004093)	ARHGEF16 (ENSPSIG00000004107)	ENSPSIG00000004127	ENSPSIG00000004131	TPRG1L (ENSPSIG00000004141)	WRAP73 (ENSPSIG00000004149)	TP73 (ENSPSIG00000004164)	CCDC27 (ENSPSIG00000004187)	SMIM1 (ENSPSIG00000004193)	LRRC47 (ENSPSIG00000004196)	CEP104 (ENSPSIG00000004209)
Lepidosauria	ANCESTRAL SPECIES	34	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00950000185199	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00940000177208	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309
Laterata	ANCESTRAL SPECIES	29	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000162836	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000165161	ENSGT00940000157799	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	16	CFAP74 (ENSPMRG00000014885)	GABRD (ENSPMRG00000014913)	PRKCZ (ENSPMRG00000014923)	SKI (ENSPMRG00000014948) #7	ENSPMRG00000006957	MORN1 (ENSPMRG00000006973) #10	RER1 (ENSPMRG00000006990) #11	PEX10 (ENSPMRG00000007006) #12	ENSPMRG00000007013	PLCH2 (ENSPMRG00000007031) #14	PANK4 (ENSPMRG00000007090) #15	ENSPMRG00000007153 #17	HES5 (ENSPMRG00000007168)	ENSPMRG00000007178 #16	ENSPMRG00000007191 #16	ENSPMRG00000007216 #22	ENSPMRG00000007249 #22	ENSPMRG00000007270	MMEL1 (ENSPMRG00000007607)	TTC34 (ENSPMRG00000008281)	ENSPMRG00000008300	ENSPMRG00000008310	ENSPMRG00000008318	ENSPMRG00000008325	ENSPMRG00000008341	PRDM16 (ENSPMRG00000008389)	ARHGEF16 (ENSPMRG00000008467)	MEGF6 (ENSPMRG00000008547)	ENSPMRG00000008738	TPRG1L (ENSPMRG00000008744)	WRAP73 (ENSPMRG00000008757)
Common wall lizard	MODERN SPECIES	16	TP73 (ENSPMRG00000008786)	WRAP73 (ENSPMRG00000008757)	TPRG1L (ENSPMRG00000008744)	ENSPMRG00000008738	MEGF6 (ENSPMRG00000008547)	ARHGEF16 (ENSPMRG00000008467)	PRDM16 (ENSPMRG00000008389)	ENSPMRG00000008341	ENSPMRG00000008325	ENSPMRG00000008318	ENSPMRG00000008310	ENSPMRG00000008300	TTC34 (ENSPMRG00000008281)	MMEL1 (ENSPMRG00000007607)	ENSPMRG00000007270	ENSPMRG00000007249 #22	ENSPMRG00000007216 #22	ENSPMRG00000007191 #16	ENSPMRG00000007178 #16	HES5 (ENSPMRG00000007168)	ENSPMRG00000007153 #17	PANK4 (ENSPMRG00000007090) #15	PLCH2 (ENSPMRG00000007031) #14	ENSPMRG00000007013	PEX10 (ENSPMRG00000007006) #12	RER1 (ENSPMRG00000006990) #11	MORN1 (ENSPMRG00000006973) #10	ENSPMRG00000006957	SKI (ENSPMRG00000014948) #7	PRKCZ (ENSPMRG00000014923)	GABRD (ENSPMRG00000014913)
Argentine black and white tegu	MODERN SPECIES	60	GNB1 (ENSSMRG00000009066)	CALML6 (ENSSMRG00000009065)	TMEM52 (ENSSMRG00000009064)	CFAP74 (ENSSMRG00000009058)	GABRD (ENSSMRG00000009056)	PRKCZ (ENSSMRG00000009048)	SKI (ENSSMRG00000009047) #7	RER1 (ENSSMRG00000009022) #11	PEX10 (ENSSMRG00000009021) #12	PLCH2 (ENSSMRG00000009016) #14	ENSSMRG00000009013 #17	PANK4 (ENSSMRG00000009012) #15	HES5 (ENSSMRG00000009011)	ENSSMRG00000008969 #16	ENSSMRG00000008967 #16	ENSSMRG00000008964 #22	ENSSMRG00000008963	ENSSMRG00000008959	ENSSMRG00000008956	PRDM16 (ENSSMRG00000008949)	ARHGEF16 (ENSSMRG00000008948)	MEGF6 (ENSSMRG00000008947)	TPRG1L (ENSSMRG00000008945)	WRAP73 (ENSSMRG00000008944)	TP73 (ENSSMRG00000008941)	ENSSMRG00000008939	ENSSMRG00000008938	MRPS16 (ENSSMRG00000008936)	ENSSMRG00000008932	SLC45A1 (ENSSMRG00000008924)	ENSSMRG00000008921
Toxicofera	ANCESTRAL SPECIES	25	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b
Elapidae	ANCESTRAL SPECIES	7	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000165349.c	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b	ENSGT00940000160951	ENSGT01030000234571.a.b
Elapidae_a	ANCESTRAL SPECIES	38	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00390000003047	ENSGT00940000162451	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b
Blue-lipped sea krait	MODERN SPECIES	9263														ENSLLTG00000012332 #16	ENSLLTG00000012337 #16	ENSLLTG00000012344 #22
Acanthophiinae	ANCESTRAL SPECIES	38	ENSGT01000000214413.b.a.b.b.b	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00510000047137 #11	ENSGT00510000048446 #12	ENSGT00940000158374 #14	ENSGT00940000163942 #17	ENSGT00940000158896 #15	ENSGT00940000163190.b #16	ENSGT00940000163190.a #16	ENSGT00950000183126.a #22	ENSGT00940000162451	ENSGT00940000165349.d.a.b	ENSGT00940000165349.d.b
Mainland tiger snake	MODERN SPECIES	391										PEX10 (ENSNSUG00000000134) #12	PLCH2 (ENSNSUG00000000150) #14	ENSNSUG00000000431 #17	PANK4 (ENSNSUG00000000435) #15	ENSNSUG00000000670 #16	ENSNSUG00000000671 #16	ENSNSUG00000000677 #22	ENSNSUG00000000685	ENSNSUG00000000692
Lizard	MODERN SPECIES	1473																tnfrsf14 (ENSACAG00000041321) #22	ENSACAG00000007852
tuatara	MODERN SPECIES	419				PRKCZ (ENSSPUG00000016395)	ENSSPUG00000016383	SKI (ENSSPUG00000016375) #7	MORN1 (ENSSPUG00000016248) #10	RER1 (ENSSPUG00000016213) #11	PEX10 (ENSSPUG00000016205) #12	PLCH2 (ENSSPUG00000015751) #14	ENSSPUG00000015611 #17	PANK4 (ENSSPUG00000015585) #15	HES5 (ENSSPUG00000015571)	ENSSPUG00000015553 #16	ENSSPUG00000015538	ENSSPUG00000015518 #22	MMEL1 (ENSSPUG00000015492)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	224	ENSLACG00000018022	AQP2 (ENSLACG00000018002)	ENSLACG00000017980	RACGAP1 (ENSLACG00000017960)	ENSLACG00000017872	ENSLACG00000017824	ENSLACG00000017709	ENSLACG00000017672	ENSLACG00000022570	krt18b (ENSLACG00000017551)	EIF4B (ENSLACG00000017403)	TNS2 (ENSLACG00000017057)	IGFBP6 (ENSLACG00000016812)	ENSLACG00000016763	ENSLACG00000016708	ENSLACG00000016638 #22	ENSLACG00000022244	SOAT2 (ENSLACG00000016553)	ITGB7 (ENSLACG00000016456)	RARG (ENSLACG00000016217)	nr1d4b (ENSLACG00000014857)	MFSD5 (ENSLACG00000014751)	ESPL1 (ENSLACG00000014488)	PFDN5 (ENSLACG00000014432)	MYG1 (ENSLACG00000014129)	ENSLACG00000013751	AAAS (ENSLACG00000013500)	SP7 (ENSLACG00000013206)	SP1 (ENSLACG00000011942)	SORL1 (ENSLACG00000010857)	SC5D (ENSLACG00000009872)
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	223	UBE2J2 (ENSLACG00000018733)	SCNN1D (ENSLACG00000018741)	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076
Coelacanth	MODERN SPECIES	223	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076	ENSLACG00000019078	CCDC27 (ENSLACG00000019080)
Coelacanth	MODERN SPECIES	223	SCNN1D (ENSLACG00000018741)	ENSLACG00000018745	ACAP3 (ENSLACG00000018750)	PUSL1 (ENSLACG00000018795)	ENSLACG00000018801	INTS11 (ENSLACG00000018802)	cptp (ENSLACG00000018809)	ENSLACG00000018812	ENSLACG00000018816	ENSLACG00000018818	DVL1 (ENSLACG00000018822)	MXRA8 (ENSLACG00000018878)	AURKAIP1 (ENSLACG00000018895)	CCNL2 (ENSLACG00000018904)	ENSLACG00000018919 #22	ENSLACG00000018925 #22	ENSLACG00000018927 #22	prxl2b (ENSLACG00000018935)	MMEL1 (ENSLACG00000018939)	TTC34 (ENSLACG00000018948)	ENSLACG00000018960	ENSLACG00000018979	ENSLACG00000018993	PRDM16 (ENSLACG00000019020)	ARHGEF16 (ENSLACG00000019031)	MEGF6 (ENSLACG00000019035)	TPRG1L (ENSLACG00000019063)	WRAP73 (ENSLACG00000019065)	TP73 (ENSLACG00000019068)	ENSLACG00000019076	ENSLACG00000019078
Actinopterygii	ANCESTRAL SPECIES	824														ENSGT00940000153395.b	ENSGT00940000154171.B	ENSGT00950000183126.a #22
Reedfish	DUPLICATION
Reedfish	DUPLICATION
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	331																ENSECRG00000018828 #22	ENSECRG00000018870
Reedfish	MODERN SPECIES	16	nabp1a (ENSECRG00000018337)	cavin2b (ENSECRG00000018322)	ENSECRG00000018305	ENSECRG00000018281	tmeff2a (ENSECRG00000018267)	ENSECRG00000018242	ENSECRG00000018225	ENSECRG00000018196	ENSECRG00000018156	slc39a10 (ENSECRG00000018105)	DNAH7 (ENSECRG00000017896)	LRRFIP1 (ENSECRG00000017765)	masp2 (ENSECRG00000017707)	mad2l2 (ENSECRG00000017629)	ENSECRG00000017582	ENSECRG00000017541 #22	ENSECRG00000017512 #22	ENSECRG00000017484	bzw1a (ENSECRG00000017446)	ENSECRG00000017415	ugt1b5 (ENSECRG00000017375)	ENSECRG00000017330	cdk11b (ENSECRG00000017277)	ENSECRG00000017232	glb1l (ENSECRG00000017204)	satb2 (ENSECRG00000017155)	ENSECRG00000017125	ENSECRG00000017101	lrrc47 (ENSECRG00000017072)	ENSECRG00000017054	b3gnt7l (ENSECRG00000017012)
Reedfish	MODERN SPECIES	16	cavin2b (ENSECRG00000018322)	ENSECRG00000018305	ENSECRG00000018281	tmeff2a (ENSECRG00000018267)	ENSECRG00000018242	ENSECRG00000018225	ENSECRG00000018196	ENSECRG00000018156	slc39a10 (ENSECRG00000018105)	DNAH7 (ENSECRG00000017896)	LRRFIP1 (ENSECRG00000017765)	masp2 (ENSECRG00000017707)	mad2l2 (ENSECRG00000017629)	ENSECRG00000017582	ENSECRG00000017541 #22	ENSECRG00000017512 #22	ENSECRG00000017484	bzw1a (ENSECRG00000017446)	ENSECRG00000017415	ugt1b5 (ENSECRG00000017375)	ENSECRG00000017330	cdk11b (ENSECRG00000017277)	ENSECRG00000017232	glb1l (ENSECRG00000017204)	satb2 (ENSECRG00000017155)	ENSECRG00000017125	ENSECRG00000017101	lrrc47 (ENSECRG00000017072)	ENSECRG00000017054	b3gnt7l (ENSECRG00000017012)	ENSECRG00000016988
Reedfish	MODERN SPECIES	17	ENSECRG00000008347	zgc:92606 (ENSECRG00000008356)	ENSECRG00000008370	emg1 (ENSECRG00000008388)	ENSECRG00000008398	ENSECRG00000008404	ENSECRG00000008410	nop2 (ENSECRG00000008420)	ing4 (ENSECRG00000008453)	ncapd2 (ENSECRG00000008492)	ENSECRG00000008543	gapdh (ENSECRG00000008565)	opn9 (ENSECRG00000008619)	IFFO1 (ENSECRG00000008680)	ENSECRG00000008701	ENSECRG00000008717 #22	ENSECRG00000008738	ENSECRG00000008764	ENSECRG00000008779	ENSECRG00000008790	ENSECRG00000008803	VAMP1 (ENSECRG00000008811)	mrpl51 (ENSECRG00000008820)	ENSECRG00000008833	ENSECRG00000008850 ##29	ENSECRG00000008860	ENSECRG00000008883	ENSECRG00000008910	ENSECRG00000008924	RIMKLB (ENSECRG00000008945)	ENSECRG00000008964
Neopterygii	DUPLICATION
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES	28	ENSGT00940000163135	ENSGT00730000111432	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT00940000153395.b	ENSGT00940000154171.B	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942 #17	ENSGT00940000158374 #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Osteoglossocephalai	ANCESTRAL SPECIES	841																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Clupeocephala	ANCESTRAL SPECIES	114	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390
Otomorpha	ANCESTRAL SPECIES	198		ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	309		ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00390000011364	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m
Characiphysae_b	ANCESTRAL SPECIES	103	ENSGT00390000011364	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT00390000011947	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22
Electric eel	DUPLICATION
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	799										ENSEEEG00000006231	ENSEEEG00000006121	MFSD12 (ENSEEEG00000006117)	csnk1g2b (ENSEEEG00000006059)	zgc:101100 (ENSEEEG00000006052)	rexo1 (ENSEEEG00000006048)	ENSEEEG00000006042 #22
Electric eel	MODERN SPECIES	220											lhx4 (ENSEEEG00000012297)	qsox1 (ENSEEEG00000012293)	ENSEEEG00000012288	ENSEEEG00000012282	CACNA1E (ENSEEEG00000011866)	ENSEEEG00000011854 #22	zgc:158862 (ENSEEEG00000011853) #22	cbwd (ENSEEEG00000011849)	foxd5 (ENSEEEG00000011846)	pgm5 (ENSEEEG00000011741)	ENSEEEG00000011735	smim15 (ENSEEEG00000011734)	ndufaf2 (ENSEEEG00000011732)	ercc8 (ENSEEEG00000011665)	elovl7a (ENSEEEG00000011663)	ENSEEEG00000011662	ENSEEEG00000011661	PDE4D (ENSEEEG00000011209)	rab3c (ENSEEEG00000011194)	si:dkey-190g11.3 (ENSEEEG00000011189)	plk2b (ENSEEEG00000010909)
Electric eel	MODERN SPECIES	111	wdr6 (ENSEEEG00000021523)	SLC26A6 (ENSEEEG00000021527)	mgll (ENSEEEG00000021528)	prkar2aa (ENSEEEG00000021529)	hyal3 (ENSEEEG00000000088)	NAA80 (ENSEEEG00000000104)	amt (ENSEEEG00000000290)	ifrd2 (ENSEEEG00000000655)	dffb (ENSEEEG00000000834)	ENSEEEG00000000839	b3gnt7l (ENSEEEG00000000842)	CEP104 (ENSEEEG00000000848)	lrrc47 (ENSEEEG00000000853)	ENSEEEG00000000855	mad2l2 (ENSEEEG00000000859)	ENSEEEG00000000864 #22	ENSEEEG00000000872	ABTB1 (ENSEEEG00000000901)	slc6a6a (ENSEEEG00000001044)	grip2a (ENSEEEG00000003094)	ssuh2rs1 (ENSEEEG00000003111)	ENSEEEG00000003112	ENSEEEG00000003118	ENSEEEG00000003556	cdk20 (ENSEEEG00000003560)	hcfc1b (ENSEEEG00000003562)	ENSEEEG00000003563	mecp2 (ENSEEEG00000003570)	ENSEEEG00000003583	FGD1 (ENSEEEG00000003585)	tfe3a (ENSEEEG00000003588)
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c
Characiphysae_b	ANCESTRAL SPECIES	100															ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c
Characoidei	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k	ENSGT00390000017443
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1348															ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	508	ENSPNAG00000017703	mgll (ENSPNAG00000017722)	prkar2aa (ENSPNAG00000017782)	NAA80 (ENSPNAG00000017796)	si:dkey-20d21.12 (ENSPNAG00000017811)	hyal3 (ENSPNAG00000017818)	amt (ENSPNAG00000003500)	ifrd2 (ENSPNAG00000017950)	dffb (ENSPNAG00000017957)	ENSPNAG00000017964	b3gnt7l (ENSPNAG00000017967)	CEP104 (ENSPNAG00000017976)	lrrc47 (ENSPNAG00000017982)	SMIM1 (ENSPNAG00000018000)	mad2l2 (ENSPNAG00000003503)	ENSPNAG00000018124 #22	ENSPNAG00000018170 #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	2350																ENSPNAG00000024540 #22
Red-bellied piranha	MODERN SPECIES	1348												ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	516															ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)	mrps36 (ENSPNAG00000014559)
Red-bellied piranha	MODERN SPECIES	1348													ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Mexicana tetra	MODERN SPECIES	1361															ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	24	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)
Channel catfish	MODERN SPECIES	24	slc26a6 (ENSIPUG00000006973)	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b #22
Characoidei	DUPLICATION
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b.a #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	793														ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Mexicana tetra	MODERN SPECIES	809																ENSAMXG00000036686 #22	mad2l2 (ENSAMXG00000030612)
Mexicana tetra	MODERN SPECIES	1238														ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Red-bellied piranha	MODERN SPECIES	516																ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.b.b.b #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	1238															ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Mexicana tetra	MODERN SPECIES	793																ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Mexicana tetra	MODERN SPECIES	1361														ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Mexicana tetra	MODERN SPECIES	1238																ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Mexicana tetra	MODERN SPECIES	793															ENSAMXG00000036833 #22	ENSAMXG00000037013 #22	ENSAMXG00000033584 #22	cbwd (ENSAMXG00000043977)	pgm5 (ENSAMXG00000014799)	ENSAMXG00000032541	smim15 (ENSAMXG00000025784)	ndufaf2 (ENSAMXG00000030300)	ercc8 (ENSAMXG00000043719)	elovl7a (ENSAMXG00000039502)	ENSAMXG00000031185	ENSAMXG00000035778	ENSAMXG00000038395	PDE4D (ENSAMXG00000029287)	rab3c (ENSAMXG00000042419)
Cyprinoidei	DUPLICATION
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.c.a #22
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)
Zebrafish	MODERN SPECIES	23	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052
Zebrafish	MODERN SPECIES	23	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)
Cyprininae	ANCESTRAL SPECIES	6	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f
Cyprininae_a	ANCESTRAL SPECIES	607									ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	538	ela2 (ENSSGRG00000026754)	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Golden-line barbel	MODERN SPECIES	4603																ENSSGRG00000003089 #22
Common carp reference	MODERN SPECIES	23	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3327						NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Goldfish	MODERN SPECIES	852							ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.a.c.b.a #22
Cyprininae	ANCESTRAL SPECIES	1468																ENSGT00950000183126.a.p.a.a.c.b.a #22	ENSGT00950000183126.a.p.b.h.b #22
Cyprininae_a	ANCESTRAL SPECIES	607								ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	MODERN SPECIES	538	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Common carp reference	MODERN SPECIES	23	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841
Goldfish	MODERN SPECIES	852						ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT01030000234528.B.a.a.b.a	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b	ENSGT00940000168127.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37						ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a	ENSGT00940000156911.i.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000168127.a.a.a
Common carp reference	MODERN SPECIES	17	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)	ENSCCRG00000014062
Golden-line barbel	MODERN SPECIES	15	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328	nkain5 (ENSSGRG00000030330)
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2176															ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	2176																ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	2757						ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d
Cyprininae_a	ANCESTRAL SPECIES	190																ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a.g	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT01030000234637.b.c.g.a	ENSGT00990000210169	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a
Common carp reference	MODERN SPECIES	23	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841	samd10a (ENSCCRG00000014083)
Zebrafish	MODERN SPECIES	23	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)	uckl1a (ENSDARG00000001686)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT01030000234528.B.a.a.a	ENSGT01030000234528.B.a.a.b.a	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	852								ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Goldfish	MODERN SPECIES	3327							NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae_a	ANCESTRAL SPECIES	607										ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Golden-line barbel	MODERN SPECIES	538	ela2l (ENSSGRG00000026771)	ela2 (ENSSGRG00000026754)	fhad1 (ENSSGRG00000026753)	ENSSGRG00000026752	ENSSGRG00000026751	ENSSGRG00000026748	ENSSGRG00000026746	ENSSGRG00000026742	ENSSGRG00000026740	dffb (ENSSGRG00000026739)	ENSSGRG00000026738	b3gnt7l (ENSSGRG00000026737)	ENSSGRG00000026736	CEP104 (ENSSGRG00000026735)	ENSSGRG00000026733	ENSSGRG00000026732 #22	ENSSGRG00000026730 #22	ENSSGRG00000026729 #22
Common carp reference	MODERN SPECIES	23	cry3a (ENSCCRG00000055194)	ENSCCRG00000055400	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581
Cyprininae	ANCESTRAL SPECIES	37							ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b
Golden-line barbel	MODERN SPECIES	15	itpr3 (ENSSGRG00000021747)	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328
Common carp reference	MODERN SPECIES	17	fhad1 (ENSCCRG00000031431)	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	873								ENSCARG00000058694	dffb (ENSCARG00000058726)	si:ch211-147a11.3 (ENSCARG00000058888)	b3gnt7l (ENSCARG00000058899)	CEP104 (ENSCARG00000058932)	lrrc47 (ENSCARG00000059069)	ENSCARG00000059084	mad2l2 (ENSCARG00000059105)	ENSCARG00000059158 #22	ENSCARG00000059172 #22	ENSCARG00000059200	ENSCARG00000059214	csde1 (ENSCARG00000059438)	porcnl (ENSCARG00000064562)	PDZD4 (ENSCARG00000064637)	IQSEC2 (ENSCARG00000064654)	ENSCARG00000064825	cacna1fb (ENSCARG00000064845)	sypa (ENSCARG00000065103)	samd10a (ENSCARG00000065114)	si:dkey-70p6.1 (ENSCARG00000065130)	nkain5 (ENSCARG00000065137)	ythdf1 (ENSCARG00000065145)	gid8a (ENSCARG00000065166)
Goldfish	MODERN SPECIES	2757							ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00940000157078.e	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	852									ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Goldfish	MODERN SPECIES	3327								NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae_a	ANCESTRAL SPECIES	607											ENSGT01000000214967	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.a.a.c.b.a #22
Common carp reference	MODERN SPECIES	23	col2a1a (ENSCCRG00000058874)	cry3a (ENSCCRG00000055194)	ENSCCRG00000055400	itpr3 (ENSCCRG00000081887)	alas2 (ENSCCRG00000057252)	ela2l (ENSCCRG00000073943)	ela2 (ENSCCRG00000057313)	ENSCCRG00000054101	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	ela2l (ENSDARG00000056765)	ela2 (ENSDARG00000056744)	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)
Zebrafish	MODERN SPECIES	23	alas2 (ENSDARG00000038643)	ela2l (ENSDARG00000056765)	ela2 (ENSDARG00000056744)	fhad1 (ENSDARG00000056723)	ENSDARG00000094473	ENSDARG00000094861	ENSDARG00000093080	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108
Otophysi	ANCESTRAL SPECIES	309			ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00940000154836.b.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b
Characiphysae_b	ANCESTRAL SPECIES	100																ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b
Characoidei	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	508	mgll (ENSPNAG00000017722)	prkar2aa (ENSPNAG00000017782)	NAA80 (ENSPNAG00000017796)	si:dkey-20d21.12 (ENSPNAG00000017811)	hyal3 (ENSPNAG00000017818)	amt (ENSPNAG00000003500)	ifrd2 (ENSPNAG00000017950)	dffb (ENSPNAG00000017957)	ENSPNAG00000017964	b3gnt7l (ENSPNAG00000017967)	CEP104 (ENSPNAG00000017976)	lrrc47 (ENSPNAG00000017982)	SMIM1 (ENSPNAG00000018000)	mad2l2 (ENSPNAG00000003503)	ENSPNAG00000018124 #22	ENSPNAG00000018170 #22
Red-bellied piranha	MODERN SPECIES	1348																ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Red-bellied piranha	MODERN SPECIES	1348														ENSPNAG00000007339 #22	ENSPNAG00000007340 #22	ENSPNAG00000007341 #22	ENSPNAG00000000127 #22	ENSPNAG00000000128 #22
Mexicana tetra	MODERN SPECIES	1361																ENSAMXG00000029136 #22	ENSAMXG00000029168 #22	ENSAMXG00000032976 #22
Channel catfish	MODERN SPECIES	24	wdr6 (ENSIPUG00000006934)	slc26a6 (ENSIPUG00000006973)	mgll (ENSIPUG00000007050)	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.b #22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37								ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000157078.e	ENSGT00940000159912.o	ENSGT01030000234528.B.a.a.a.d	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c
Golden-line barbel	MODERN SPECIES	15	GPR37L1 (ENSSGRG00000021688)	itpr3 (ENSSGRG00000021747)	alas2 (ENSSGRG00000027356)	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)
Common carp reference	MODERN SPECIES	17	alas2 (ENSCCRG00000062931)	ela2l (ENSCCRG00000031426)	fhad1 (ENSCCRG00000031431)	ENSCCRG00000010509	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731
Goldfish	MODERN SPECIES	2757								ENSCARG00000062383	dffb (ENSCARG00000062404)	si:ch211-147a11.3 (ENSCARG00000062494)	b3gnt7l (ENSCARG00000062508)	CEP104 (ENSCARG00000062531)	lrrc47 (ENSCARG00000062640)	ENSCARG00000062659	mad2l2 (ENSCARG00000062672)	ENSCARG00000062699 #22	ENSCARG00000062715 #22	ENSCARG00000062730 #22
Cyprininae	ANCESTRAL SPECIES	1091													ENSGT00390000008296.b.b.c	ENSGT00390000011483	ENSGT00390000009531	ENSGT00950000183126.a.p.a.b.d #22
Cyprininae_a	ANCESTRAL SPECIES	638									ENSGT00390000012078.b.hb.a	ENSGT00940000156411.n	ENSGT00390000018845.e.f	ENSGT00940000157066.p.g	ENSGT00390000008296.b.b.c	ENSGT00390000011483	ENSGT00390000009531.b	ENSGT00950000183126.a.p.a.b.d #22
Golden-line barbel	MODERN SPECIES	3809																ENSSGRG00000007217 #22
Common carp reference	MODERN SPECIES	45	LHFPL2 (ENSCCRG00000075460)	ENSCCRG00000058411	ENSCCRG00000019400	ENSCCRG00000035602	RAD23B (ENSCCRG00000080999)	ENSCCRG00000024396	ZNF462 (ENSCCRG00000071627)	TMEM38B (ENSCCRG00000002998)	ENSCCRG00000047625	ENSCCRG00000067573	ENSCCRG00000046851	ENSCCRG00000057866	ENSCCRG00000056590	ENSCCRG00000022743	ENSCCRG00000077787	ENSCCRG00000062714 #22	ENSCCRG00000075362	ENSCCRG00000068501	ENSCCRG00000071480	ENSCCRG00000053540	ENSCCRG00000057029	ENSCCRG00000056717	ENSCCRG00000024127	ENSCCRG00000021731	ENSCCRG00000055376	ENSCCRG00000031976	ENSCCRG00000028587	ENSCCRG00000061694	ENSCCRG00000029501	zgc:152948 (ENSCCRG00000029498)	ENSCCRG00000066445
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2790										ENSCARG00000064506	oaz1b (ENSCARG00000064488)	ENSCARG00000063724	ENSCARG00000063649	ENSCARG00000063638	ENSCARG00000063611 #22	ENSCARG00000063598 #22	ENSCARG00000063590	ENSCARG00000063585
Goldfish	MODERN SPECIES	707									ENSCARG00000038789	ENSCARG00000038801	oaz1b (ENSCARG00000038828)	ENSCARG00000038930	ENSCARG00000040276	ENSCARG00000040294	ENSCARG00000040303	ENSCARG00000040313 #22	ENSCARG00000040330 #22	ENSCARG00000040342	ENSCARG00000040350	ENSCARG00000040356	ENSCARG00000040361 #22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	707								ENSCARG00000038789	ENSCARG00000038801	oaz1b (ENSCARG00000038828)	ENSCARG00000038930	ENSCARG00000040276	ENSCARG00000040294	ENSCARG00000040303	ENSCARG00000040313 #22	ENSCARG00000040330 #22	ENSCARG00000040342	ENSCARG00000040350	ENSCARG00000040356	ENSCARG00000040361 #22
Goldfish	MODERN SPECIES	2790											ENSCARG00000064506	oaz1b (ENSCARG00000064488)	ENSCARG00000063724	ENSCARG00000063649	ENSCARG00000063638	ENSCARG00000063611 #22	ENSCARG00000063598 #22	ENSCARG00000063590	ENSCARG00000063585
Goldfish	MODERN SPECIES	13																ENSCARG00000016138 #22	ENSCARG00000016118	ENSCARG00000016111	ENSCARG00000016103	ENSCARG00000016086	WDR7 (ENSCARG00000016052)	ENSCARG00000016038	ENSCARG00000016032	ENSCARG00000016023	add1 (ENSCARG00000015820)	ENSCARG00000015804	ENSCARG00000015773	ENSCARG00000015759	ENSCARG00000015755	S1PR3 (ENSCARG00000015753)	ENSCARG00000015749
Goldfish	MODERN SPECIES	2893																ENSCARG00000042817 #22	ENSCARG00000042788
Goldfish	MODERN SPECIES	707																ENSCARG00000040361 #22	ENSCARG00000040356	ENSCARG00000040350	ENSCARG00000040342	ENSCARG00000040330 #22	ENSCARG00000040313 #22	ENSCARG00000040303	ENSCARG00000040294	ENSCARG00000040276	ENSCARG00000038930	oaz1b (ENSCARG00000038828)	ENSCARG00000038801	ENSCARG00000038789
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT01100000263484.B.b.a	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)	DUSP7 (ENSCHAG00000019003)	ENSCHAG00000019015	slc6a1a (ENSCHAG00000019029)	VGLL4 (ENSCHAG00000019262)	syn2a (ENSCHAG00000019267)	ENSCHAG00000019273
Atlantic herring	MODERN SPECIES	20	TPRG1L (ENSCHAG00000022297)	wrap73 (ENSCHAG00000022313)	tp73 (ENSCHAG00000022349)	rer1 (ENSCHAG00000022408) #11	ENSCHAG00000022436	ENSCHAG00000022683	ENSCHAG00000022907	ENSCHAG00000023125	adora1b (ENSCHAG00000023190)	ENSCHAG00000023193	mfn2 (ENSCHAG00000000163)	ENSCHAG00000000245	ENSCHAG00000000287	ENSCHAG00000000291	ENSCHAG00000000297	ENSCHAG00000000318 #22	ENSCHAG00000000327 #22	ENSCHAG00000000833	skia (ENSCHAG00000001665) #7	ENSCHAG00000001765	si:ch211-251b21.1 (ENSCHAG00000001767) #17	plch2a (ENSCHAG00000001857) #14	pex10 (ENSCHAG00000003014) #12	ENSCHAG00000003132	ENSCHAG00000003174	nppal (ENSCHAG00000003202)	si:dkeyp-104h9.5 (ENSCHAG00000003221)	plod1a (ENSCHAG00000003555)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114
Atlantic herring	MODERN SPECIES	20	VGLL4 (ENSCHAG00000019262)	slc6a1a (ENSCHAG00000019029)	ENSCHAG00000019015	DUSP7 (ENSCHAG00000019003)	atp6ap1a (ENSCHAG00000018899)	tafazzin (ENSCHAG00000018782)	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000015183	ENSCHAG00000015148	ENSCHAG00000015142	ENSCHAG00000014973	ENSCHAG00000014958	ENSCHAG00000014926	NTSR1 (ENSCHAG00000014915)	SLCO4A1 (ENSCHAG00000014834)	zgc:110353 (ENSCHAG00000014811)	ENSCHAG00000014806	ENSCHAG00000014800	ENSCHAG00000014768	ENSCHAG00000014648	ENSCHAG00000014616	ENSCHAG00000014609	ENSCHAG00000014558 #22	ENSCHAG00000014538	hsd17b10 (ENSCHAG00000014502)	FAM120C (ENSCHAG00000014277)	IDH3G (ENSCHAG00000013003)	ENSCHAG00000012954	AVPR2 (ENSCHAG00000012945)	sephs3 (ENSCHAG00000012863)	ssr4 (ENSCHAG00000012745)	ikbkg (ENSCHAG00000012691)	cav4b (ENSCHAG00000012685)	ARHGAP4 (ENSCHAG00000012336)	zgc:103759 (ENSCHAG00000012285)	naa10 (ENSCHAG00000011865)	G6PD (ENSCHAG00000009740) ##24	ENSCHAG00000009446
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22
Atlantic herring	MODERN SPECIES	18	aanat1 (ENSCHAG00000015652)	UBE2O (ENSCHAG00000015566)	SPHK1 (ENSCHAG00000015490)	UBE2O (ENSCHAG00000015411)	SPHK1 (ENSCHAG00000015354)	cygb2 (ENSCHAG00000015325)	ENSCHAG00000015299	PRPSAP1 (ENSCHAG00000015256)	PRPSAP1 (ENSCHAG00000015124)	ENSCHAG00000015101	ENSCHAG00000014367	ENSCHAG00000014312	ENSCHAG00000014076	ENSCHAG00000014047	SEC14L1 (ENSCHAG00000013772)	ENSCHAG00000013720 #22	ABAT (ENSCHAG00000013107)	tmem186 (ENSCHAG00000013092)	ENSCHAG00000013035	gde1 (ENSCHAG00000012996)	mcrip2 (ENSCHAG00000012987)	ENSCHAG00000012969	ENSCHAG00000012962	CREBBP (ENSCHAG00000009309)	ADCY9 (ENSCHAG00000009104)	SRL (ENSCHAG00000009094)	TFAP4 (ENSCHAG00000009077)	GLIS2 (ENSCHAG00000009032)	ENSCHAG00000009009	ENSCHAG00000009000	ENSCHAG00000008961
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)	TNFRSF6B (ENSCHAG00000010823)	ENSCHAG00000010817	RTEL1 (ENSCHAG00000008151)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000010817	TNFRSF6B (ENSCHAG00000010823)	zgpat (ENSCHAG00000010827)	dffb (ENSCHAG00000010836)	ENSCHAG00000010860	b3gnt7l (ENSCHAG00000010895)	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000016840	noxa1 (ENSCHAG00000016859)	ENSCHAG00000016877	adrb3a (ENSCHAG00000016998)	npm2a (ENSCHAG00000017006)	got1l1 (ENSCHAG00000017021)	ENSCHAG00000017082	prlhr2a (ENSCHAG00000017087)	ENSCHAG00000017130	ENSCHAG00000017140	adgra2 (ENSCHAG00000017179)	pdlim2 (ENSCHAG00000018351)	sorbs3 (ENSCHAG00000018358)	sytl1 (ENSCHAG00000018364)	zgc:110239 (ENSCHAG00000018378)	ENSCHAG00000018465 #22	ENSCHAG00000018514	ENSCHAG00000018687	mthfd2l (ENSCHAG00000018748)	lipg (ENSCHAG00000018787)	slc20a2 (ENSCHAG00000018853)	ENSCHAG00000018984	ostf1 (ENSCHAG00000019000)	ENSCHAG00000019078	RFESD (ENSCHAG00000019160)	ENSCHAG00000019164	pcsk5b (ENSCHAG00000019210)	rfk (ENSCHAG00000020946)	FOXB2 (ENSCHAG00000020979)	ENSCHAG00000021009	vps13a (ENSCHAG00000021136)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)	ndnl2 (ENSCHAG00000018210)	ITIH6 (ENSCHAG00000018239)	GDI1 (ENSCHAG00000018356)	ENSCHAG00000018525	tafazzin (ENSCHAG00000018782)	atp6ap1a (ENSCHAG00000018899)	DUSP7 (ENSCHAG00000019003)	ENSCHAG00000019015	slc6a1a (ENSCHAG00000019029)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	dffb (ENSCHAG00000010836)	ENSCHAG00000010860	b3gnt7l (ENSCHAG00000010895)	CEP104 (ENSCHAG00000010907)	lrrc47 (ENSCHAG00000011019)	ENSCHAG00000011063	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011091	ENSCHAG00000011114	ENSCHAG00000011120 #22	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341	ENSCHAG00000011312 #22	ENSCHAG00000011290 #22	ENSCHAG00000011262 #22	ENSCHAG00000011237	ENSCHAG00000011178 #22	ENSCHAG00000011147 #22	ENSCHAG00000011127	ENSCHAG00000011120 #22	ENSCHAG00000011114	ENSCHAG00000011091	mad2l2 (ENSCHAG00000011079)	ENSCHAG00000011063	lrrc47 (ENSCHAG00000011019)	CEP104 (ENSCHAG00000010907)	b3gnt7l (ENSCHAG00000010895)	ENSCHAG00000010860	dffb (ENSCHAG00000010836)	zgpat (ENSCHAG00000010827)	TNFRSF6B (ENSCHAG00000010823)	ENSCHAG00000010817	RTEL1 (ENSCHAG00000008151)	GMEB2 (ENSCHAG00000008027)	pdyn (ENSCHAG00000008018)
Denticle herring	MODERN SPECIES	8	ENSDCDG00000031851	sema3e (ENSDCDG00000031511)	sema3ab (ENSDCDG00000029463)	sema3d (ENSDCDG00000028536)	TMED6 (ENSDCDG00000028493)	TUBA4A (ENSDCDG00000028487)	AMPD3 (ENSDCDG00000026704)	grm3 (ENSDCDG00000026677)	elapor2a (ENSDCDG00000025746)	tmem243a (ENSDCDG00000025691)	fam107b (ENSDCDG00000025688)	ENSDCDG00000025676	frmd4a (ENSDCDG00000025272)	prpf18 (ENSDCDG00000025179)	piwil1 (ENSDCDG00000025171)	ENSDCDG00000025128 #22	BEND7 (ENSDCDG00000025125)	sephs1 (ENSDCDG00000025120)	trabd (ENSDCDG00000025114)	mapk12a (ENSDCDG00000023667)	uri1 (ENSDCDG00000023623)	zgc:112052 (ENSDCDG00000023618)	rxylt1 (ENSDCDG00000023617)	SRGAP1 (ENSDCDG00000019055)	ENSDCDG00000018910	ENSDCDG00000018907	ENSDCDG00000018903	ENSDCDG00000018900	bcl2l13 (ENSDCDG00000018894)	wee2 (ENSDCDG00000018891)	agk (ENSDCDG00000018361)
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT00940000153269.b.a	ENSGT01100000263484.B.b.a	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643
Denticle herring	DUPLICATION
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028834	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600
Denticle herring	MODERN SPECIES	1	ocstamp (ENSDCDG00000028833)	ENSDCDG00000028834	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028835	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)
Euteleosteomorpha	ANCESTRAL SPECIES	61	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390
Acanthomorphata	ANCESTRAL SPECIES	136	ENSGT00520000060938	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Euacanthomorphacea	ANCESTRAL SPECIES	73	ENSGT00940000165603	ENSGT00390000016496	ENSGT00390000014490	ENSGT00510000048827	ENSGT00510000048586	ENSGT00390000014794.a	ENSGT00950000183462	ENSGT00940000160122	ENSGT00900000141054	ENSGT01000000214413.b.a.b.b.a	ENSGT00390000013792	ENSGT00520000060938	ENSGT00940000159351	ENSGT00940000161002	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00950000182931.A.a.b	ENSGT01030000234578.B.b.a	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00950000182970.A.b
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151
Cyprinodontoidei	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742
Poeciliinae	DUPLICATION
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.e #22
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.e #22
Guppy	DUPLICATION
Guppy	MODERN SPECIES	459	MYT1 (ENSPREG00000005256)	ENSPREG00000005304	TBC1D22B (ENSPREG00000005317)	snrpg (ENSPREG00000005370)	plpbp (ENSPREG00000005413)	tmed4 (ENSPREG00000005427)	ikbkg (ENSPREG00000005446)	sephs3 (ENSPREG00000005490)	ap4b1 (ENSPREG00000005512)	zgc:101663 (ENSPREG00000005542)	ccnq (ENSPREG00000005567)	atp2b3a (ENSPREG00000005594)	ENSPREG00000005646	ENSPREG00000005650	ENSPREG00000005656	ENSPREG00000005673 #22	ENSPREG00000005714	MRPL49 (ENSPREG00000005735)	ENSPREG00000005751	FLNA (ENSPREG00000005812)	rpl10 (ENSPREG00000006075)	ENSPREG00000006157	renbp (ENSPREG00000006197)	ENSPREG00000006243	dennd2da (ENSPREG00000006264)	stk38a (ENSPREG00000006334)	pex10 (ENSPREG00000006359) #12	plch2a (ENSPREG00000006383) #14	si:ch211-251b21.1 (ENSPREG00000006446) #17	skia (ENSPREG00000006492) #7	prkcz (ENSPREG00000006532)
Guppy	MODERN SPECIES	459	ENSPREG00000020197	tspan31 (ENSPREG00000020212)	agap2 (ENSPREG00000020238)	ZBTB39 (ENSPREG00000020310)	gpr182 (ENSPREG00000020348)	ENSPREG00000020354	igfbp6b (ENSPREG00000020376)	spryd3 (ENSPREG00000020419)	lima1a (ENSPREG00000020431)	slc16a1b (ENSPREG00000020446)	AVPR2 (ENSPREG00000020474)	FAM120C (ENSPREG00000020487)	hsd17b10 (ENSPREG00000020507)	ENSPREG00000020517	ENSPREG00000020527	ENSPREG00000020535 #22	CABLES2 (ENSPREG00000020554)	jph2 (ENSPREG00000020578)	GDAP1L1 (ENSPREG00000020587)	fitm2 (ENSPREG00000020601)	hnf4a (ENSPREG00000020625)	ttpal (ENSPREG00000020647)	pkig (ENSPREG00000020666)	ada (ENSPREG00000020675)	ccn5 (ENSPREG00000020690)	ENSPREG00000020697	ENSPREG00000020704	ENSPREG00000020716	ENSPREG00000020725	ENSPREG00000020733	ENSPREG00000020740
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f #22	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17
Poecilia	ANCESTRAL SPECIES	26	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f #22	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17
Guppy	DUPLICATION
Guppy	MODERN SPECIES	300																ENSPREG00000005179 #22
Guppy	MODERN SPECIES	386																ENSPREG00000006968 #22
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	179	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00970000197642	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f.c #22
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	495	kif3b (ENSPFOG00000015985)	ENSPFOG00000016011	MYT1 (ENSPFOG00000016047)	TBC1D22B (ENSPFOG00000016120)	snrpg (ENSPFOG00000016200)	plpbp (ENSPFOG00000016204)	tmed4 (ENSPFOG00000016236)	ikbkg (ENSPFOG00000016262)	sephs3 (ENSPFOG00000016280)	ap4b1 (ENSPFOG00000016311)	zgc:101663 (ENSPFOG00000016373)	ccnq (ENSPFOG00000016386)	atp2b3b (ENSPFOG00000016422)	ENSPFOG00000020851	las1l (ENSPFOG00000020852)	ENSPFOG00000023779 #22
Amazon molly	MODERN SPECIES	671															ENSPFOG00000002080 #22	ENSPFOG00000024505 #22	MRPL49 (ENSPFOG00000020078)	ENSPFOG00000023117	ENSPFOG00000002069	FLNA (ENSPFOG00000001616)	rpl10 (ENSPFOG00000001344)	ENSPFOG00000001229	renbp (ENSPFOG00000001025)	ENSPFOG00000022079	dennd2da (ENSPFOG00000000852)	stk38a (ENSPFOG00000000692)	pex10 (ENSPFOG00000000648) #12	plch2a (ENSPFOG00000000513) #14	si:ch211-251b21.1 (ENSPFOG00000022127) #17
Sailfin molly	MODERN SPECIES	350							TBC1D10A (ENSPLAG00000017225)	sf3a1 (ENSPLAG00000017268)	CCDC157 (ENSPLAG00000017296)	ENSPLAG00000017318	slc7a4 (ENSPLAG00000017330)	ENSPLAG00000017350	RICTOR (ENSPLAG00000017414)	NPC1L1 (ENSPLAG00000017477)	nono (ENSPLAG00000017492)	ENSPLAG00000017516 #22	ENSPLAG00000017603 #22	ENSPLAG00000000549	MRPL49 (ENSPLAG00000017623)	ENSPLAG00000017631	ENSPLAG00000017642	FLNA (ENSPLAG00000000405)	ENSPLAG00000017689	rpl10 (ENSPLAG00000017727)	ENSPLAG00000017756	renbp (ENSPLAG00000017773)	ENSPLAG00000017788	dennd2da (ENSPLAG00000017799)	stk38a (ENSPLAG00000017852)	pex10 (ENSPLAG00000017861) #12
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.f.d #22
Sailfin molly	MODERN SPECIES	350						TBC1D10A (ENSPLAG00000017225)	sf3a1 (ENSPLAG00000017268)	CCDC157 (ENSPLAG00000017296)	ENSPLAG00000017318	slc7a4 (ENSPLAG00000017330)	ENSPLAG00000017350	RICTOR (ENSPLAG00000017414)	NPC1L1 (ENSPLAG00000017477)	nono (ENSPLAG00000017492)	ENSPLAG00000017516 #22	ENSPLAG00000017603 #22	ENSPLAG00000000549	MRPL49 (ENSPLAG00000017623)	ENSPLAG00000017631	ENSPLAG00000017642	FLNA (ENSPLAG00000000405)	ENSPLAG00000017689	rpl10 (ENSPLAG00000017727)	ENSPLAG00000017756	renbp (ENSPLAG00000017773)	ENSPLAG00000017788	dennd2da (ENSPLAG00000017799)	stk38a (ENSPLAG00000017852)	pex10 (ENSPLAG00000017861) #12
Amazon molly	MODERN SPECIES	671		si:ch211-251b21.1 (ENSPFOG00000022127) #17	plch2a (ENSPFOG00000000513) #14	pex10 (ENSPFOG00000000648) #12	stk38a (ENSPFOG00000000692)	dennd2da (ENSPFOG00000000852)	ENSPFOG00000022079	renbp (ENSPFOG00000001025)	ENSPFOG00000001229	rpl10 (ENSPFOG00000001344)	FLNA (ENSPFOG00000001616)	ENSPFOG00000002069	ENSPFOG00000023117	MRPL49 (ENSPFOG00000020078)	ENSPFOG00000024505 #22	ENSPFOG00000002080 #22
Platyfish	DUPLICATION
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES		MAPK13 (ENSXMAG00000012699)	ENSXMAG00000024569	ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14
Platyfish	MODERN SPECIES		ENSXMAG00000027801	TBC1D22B (ENSXMAG00000004320)	ENSXMAG00000028023	snrpg (ENSXMAG00000004353)	plpbp (ENSXMAG00000004354)	tmed4 (ENSXMAG00000004360)	ikbkg (ENSXMAG00000004368)	sephs3 (ENSXMAG00000029983)	ap4b1 (ENSXMAG00000004378)	zgc:101663 (ENSXMAG00000027802)	ENSXMAG00000022842	ccnq (ENSXMAG00000004404)	atp2b3b (ENSXMAG00000004407)	ENSXMAG00000013649	ENSXMAG00000023987	ENSXMAG00000025516 #22	tpk2 (ENSXMAG00000023034)	ENSXMAG00000004466	tpx2 (ENSXMAG00000004475)	plod1a (ENSXMAG00000004495)	si:dkeyp-104h9.5 (ENSXMAG00000004560)	phc2a (ENSXMAG00000004561)	ENSXMAG00000027747	rcc2 (ENSXMAG00000004563)	rpl22 (ENSXMAG00000004585)	icmt (ENSXMAG00000021941)	rtel1 (ENSXMAG00000004603)	mfn2 (ENSXMAG00000004637)	ENSXMAG00000019757	ENSXMAG00000024079	asxl1 (ENSXMAG00000013501)
Platyfish	DUPLICATION
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES		kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)	dennd2da (ENSXMAG00000004839)
Platyfish	MODERN SPECIES		ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)
Platyfish	MODERN SPECIES		ENSXMAG00000024569	ENSXMAG00000025184	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000023670	mthfr (ENSXMAG00000012737)	slc2a1a (ENSXMAG00000012748)	slc38a5b (ENSXMAG00000012770)	ccdc22 (ENSXMAG00000012774)	tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12
NAME_4	DUPLICATION
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.g #22
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	1119															NELL1 (ENSCVAG00000000704)	ENSCVAG00000007572 #22	ENSCVAG00000007587 #22
Sheepshead minnow	MODERN SPECIES	927			SETBP1 (ENSCVAG00000013210)	cdk7 (ENSCVAG00000013203)	serinc5 (ENSCVAG00000013177)	thbs4a (ENSCVAG00000013167)	mtx3 (ENSCVAG00000013083)	cmya5 (ENSCVAG00000013047)	tent2 (ENSCVAG00000013041)	homer1b (ENSCVAG00000013030)	JMY (ENSCVAG00000012999)	ENSCVAG00000012983	dimt1l (ENSCVAG00000012978)	kif2a (ENSCVAG00000012908)	unc45b (ENSCVAG00000012719)	ENSCVAG00000012661 #22	ENSCVAG00000012638	ENSCVAG00000012620
Mummichog	MODERN SPECIES	2240	afg1lb (ENSFHEG00000023340)	foxo3b (ENSFHEG00000023338)	ARMC2 (ENSFHEG00000023335)	sesn1 (ENSFHEG00000023330)	cep57l1 (ENSFHEG00000023326)	cd164 (ENSFHEG00000023325)	ppil6 (ENSFHEG00000023323)	ENSFHEG00000023320	ENSFHEG00000023319	msgn1 (ENSFHEG00000023318)	si:ch211-51e12.7 (ENSFHEG00000023316)	mrps10 (ENSFHEG00000023314)	tulp4a (ENSFHEG00000023310)	tmem181 (ENSFHEG00000023306)	DYNLT1 (ENSFHEG00000023303)	ENSFHEG00000023302 #22	gtf2h5 (ENSFHEG00000023300)	serac1 (ENSFHEG00000023298)	myct1a (ENSFHEG00000023295)	ENSFHEG00000023287	ENSFHEG00000023281	SYNE1 (ENSFHEG00000023274)	esr1 (ENSFHEG00000000933)	armt1 (ENSFHEG00000000949)	zbtb2b (ENSFHEG00000000951)	akap12b (ENSFHEG00000000954)	mthfd1l (ENSFHEG00000000959)	stx11b.2 (ENSFHEG00000000962)	STX11 (ENSFHEG00000000963)	UTRN (ENSFHEG00000000967)	ENSFHEG00000000980
NAME_4	ANCESTRAL SPECIES	454																ENSGT00950000183126.a.p.a.h #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	907					ENSCVAG00000021852	ENSCVAG00000000556	tubb2b (ENSCVAG00000021868)	ENSCVAG00000021885	FKBP15 (ENSCVAG00000021919)	fgf17 (ENSCVAG00000021931)	entpd2a.1 (ENSCVAG00000000561)	nelfb (ENSCVAG00000021970)	ENSCVAG00000021986	arrdc1a (ENSCVAG00000021997)	ehmt1a (ENSCVAG00000022013)	ENSCVAG00000022029 #22	ENSCVAG00000022060 #22
Sheepshead minnow	MODERN SPECIES	1749																ENSCVAG00000012788 #22	ENSCVAG00000012768 #22
Sheepshead minnow	MODERN SPECIES	1749															ENSCVAG00000012788 #22	ENSCVAG00000012768 #22
Aplocheiloidei	ANCESTRAL SPECIES	60	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000003937	ENSGT00390000017253	ENSGT00390000014785	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284
Mangrove rivulus	DUPLICATION
Mangrove rivulus	DUPLICATION
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	1448																ENSKMAG00000001992 #22
Mangrove rivulus	MODERN SPECIES	1624																ENSKMAG00000008410 #22
Mangrove rivulus	MODERN SPECIES	627															ENSKMAG00000010683	ENSKMAG00000010658 #22	ENSKMAG00000010636 #22	prkcz (ENSKMAG00000010610)
Mangrove rivulus	MODERN SPECIES	1247																ENSKMAG00000008441 #22
Turquoise killifish	MODERN SPECIES	1624	AP4B1 (ENSNFUG00015009549)	zgc:101663 (ENSNFUG00015009535)	C23H1ORF192 (ENSNFUG00015009521)	ccnq (ENSNFUG00015009510)	atp2b3a (ENSNFUG00015009145)	ENSNFUG00015008985	ENSNFUG00015008976	BX248510.1 (ENSNFUG00015008960)	HAUS7 (ENSNFUG00015008930)	ENSNFUG00015008904	ENSNFUG00015008882	ENSNFUG00015008357	RPL10 (ENSNFUG00015008333)	ENSNFUG00015008321	ENSNFUG00015008308	zgc:153759 (ENSNFUG00015008302) #22	ENSNFUG00015008286	ENSNFUG00015008276	ENSNFUG00015008275	prkcz (ENSNFUG00015008150)	SKIA (ENSNFUG00015008099) #7	si:ch211-251b21.1 (ENSNFUG00015008082) #17	plch2a (ENSNFUG00015007480) #14	pex10 (ENSNFUG00015007385) #12	DENND2DA (ENSNFUG00015007318)	ENSNFUG00015007305	renbp (ENSNFUG00015007140)	ENSNFUG00015007129	RTEL1 (ENSNFUG00015007055)	icmt (ENSNFUG00015007044)	rpl22 (ENSNFUG00015007034)
Oryzias	ANCESTRAL SPECIES	45	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078
Oryzias_b	ANCESTRAL SPECIES	48	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	616																ENSOMEG00000011646 #22	ENSOMEG00000011630 #22	prkcz (ENSOMEG00000011568)	ENSOMEG00000011369	ENSOMEG00000011361 #7	ENSOMEG00000011344
Indian medaka	MODERN SPECIES	722																ENSOMEG00000013346 #22	ENSOMEG00000013278	ENSOMEG00000000332
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	21	bcap31 (ENSOJAG00000001315)	ptpn18 (ENSOJAG00000001129)	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)
Javanese ricefish	MODERN SPECIES	21	ptpn18 (ENSOJAG00000001129)	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)	LRRC38 (ENSOJAG00000010413)
Oryzias_a	ANCESTRAL SPECIES	54	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Japanese Medaka HdrR	MODERN SPECIES	21	gripap1 (ENSORLG00000018356)	kcnd1 (ENSORLG00000018330)	ENSORLG00000018299	mfn2 (ENSORLG00000025366)	ENSORLG00000023957	ENSORLG00000026958	dedd (ENSORLG00000024196)	tnnc1b (ENSORLG00000019408)	ENSORLG00000027984	nppal (ENSORLG00000025996)	nppb (ENSORLG00000027335)	ENSORLG00000024366	ENSORLG00000027273	ENSORLG00000009359	igsf21b (ENSORLG00000016826)	ENSORLG00000016829 #22	ENSORLG00000024029 #22	prkcz (ENSORLG00000016850)	ENSORLG00000024678	skia (ENSORLG00000016855) #7	ENSORLG00000022931	si:ch211-251b21.1 (ENSORLG00000016860) #17	ENSORLG00000028134	plch2a (ENSORLG00000016877) #14	ENSORLG00000029302	pex10 (ENSORLG00000016884) #12	ENSORLG00000016889	renbp (ENSORLG00000016904)	ENSORLG00000027554	ENSORLG00000016906	dennd2da (ENSORLG00000020542)
Chinese medaka	MODERN SPECIES	49									ENSOSIG00000000580	KCNAB2 (ENSOSIG00000000572)	dedd (ENSOSIG00000000567)	tnnc1b (ENSOSIG00000000566)	nppal (ENSOSIG00000000565)	ENSOSIG00000000563	igsf21b (ENSOSIG00000000066)	ENSOSIG00000000054 #22	ENSOSIG00000015359 #22	prkcz (ENSOSIG00000015178)	ENSOSIG00000015177	skia (ENSOSIG00000015175) #7	plch2a (ENSOSIG00000015125) #14	ENSOSIG00000015112	renbp (ENSOSIG00000015062)	ENSOSIG00000015060	ENSOSIG00000015058	dennd2da (ENSOSIG00000015057)	stk38a (ENSOSIG00000015049)	ENSOSIG00000015046	ENSOSIG00000015044
Ovalentaria_B	ANCESTRAL SPECIES	2					ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275	ENSGT00940000156607.a.b
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.r	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B
P. nyererei	MODERN SPECIES	304	ENSPNYG00000001489	ENSPNYG00000001380	glb1l (ENSPNYG00000001327)	ANKZF1 (ENSPNYG00000001310)	ENSPNYG00000001277	ENSPNYG00000001248	tra2b (ENSPNYG00000001238)	igf2bp2a (ENSPNYG00000001187)	ENSPNYG00000001166	ehhadh (ENSPNYG00000001157)	zgc:162707 (ENSPNYG00000001153)	nme9 (ENSPNYG00000001110)	ENSPNYG00000001099	SMARCAL1 (ENSPNYG00000001058)	MARCHF4 (ENSPNYG00000000999)	ENSPNYG00000000972 #22	ENSPNYG00000000965 #22	ENSPNYG00000000944	ENSPNYG00000000925	xrcc5 (ENSPNYG00000000911)	TMEM169 (ENSPNYG00000000898)	PFKL (ENSPNYG00000000802)	MAP3K13 (ENSPNYG00000000790)	trpm2 (ENSPNYG00000000679)	hycc2 (ENSPNYG00000019965)	ENSPNYG00000019883	DIP2A (ENSPNYG00000019802)	ENSPNYG00000019776	ENSPNYG00000019740	ENSPNYG00000019701	ENSPNYG00000019666
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00950000182895.a.b.v.k	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000160683
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005007958	ENSMZEG00005007928	glb1l (ENSMZEG00005007880)	ANKZF1 (ENSMZEG00005007906)	ENSMZEG00005007865	ENSMZEG00005007848	tra2b (ENSMZEG00005007817)	igf2bp2a (ENSMZEG00005007777)	tmem41aa (ENSMZEG00005007760)	ehhadh (ENSMZEG00005007744)	zgc:162707 (ENSMZEG00005007724)	nme9 (ENSMZEG00005007697)	ENSMZEG00005007691	SMARCAL1 (ENSMZEG00005007660)	MARCHF4 (ENSMZEG00005007652)	ENSMZEG00005007645 #22	ENSMZEG00005007629 #22	ENSMZEG00005007621	ENSMZEG00005007607	xrcc5 (ENSMZEG00005007591)	TMEM169 (ENSMZEG00005007585)	TANC1 (ENSMZEG00005007557)	WDSUB1 (ENSMZEG00005007538)	ENSMZEG00005007519	BAZ2B (ENSMZEG00005007380)	CD302 (ENSMZEG00005007347)	RBMS1 (ENSMZEG00005007313)	tank (ENSMZEG00005007292)	tbr1b (ENSMZEG00005007278)	SLC4A10 (ENSMZEG00005007236)	gcgb (ENSMZEG00005007228)
Eastern happy	MODERN SPECIES	7	ENSACLG00000015115	ENSACLG00000015141	glb1l (ENSACLG00000015236)	ANKZF1 (ENSACLG00000015301)	ENSACLG00000015369	ENSACLG00000015432	tra2b (ENSACLG00000015461)	igf2bp2a (ENSACLG00000015512)	tmem41aa (ENSACLG00000015796)	ehhadh (ENSACLG00000015819)	zgc:162707 (ENSACLG00000015853)	nme9 (ENSACLG00000015875)	SMARCAL1 (ENSACLG00000015990)	MARCHF4 (ENSACLG00000016071)	ENSACLG00000016093 #22	ENSACLG00000016169 #22	COL6A2 (ENSACLG00000016186)	xrcc5 (ENSACLG00000016331)	TMEM169 (ENSACLG00000016388)	PFKL (ENSACLG00000016404)	MAP3K13 (ENSACLG00000016481)	trpm2 (ENSACLG00000016644)	hycc2 (ENSACLG00000016763)	ENSACLG00000016906	DIP2A (ENSACLG00000016955)	ENSACLG00000017309	ENSACLG00000017318	ENSACLG00000017330	ENSACLG00000017436	prmt2 (ENSACLG00000017462)	ENSACLG00000017480
Lyretail cichlid	MODERN SPECIES	303	ENSNBRG00000015910	glb1l (ENSNBRG00000015985)	ENSNBRG00000016017	ENSNBRG00000016024	ENSNBRG00000016037	ENSNBRG00000016058	tra2b (ENSNBRG00000016092)	igf2bp2a (ENSNBRG00000016140)	tmem41aa (ENSNBRG00000016175)	ehhadh (ENSNBRG00000016194)	zgc:162707 (ENSNBRG00000016203)	nme9 (ENSNBRG00000016220)	ENSNBRG00000016254	SMARCAL1 (ENSNBRG00000016273)	MARCHF4 (ENSNBRG00000016380)	ENSNBRG00000016401 #22	COL6A2 (ENSNBRG00000016418)	xrcc5 (ENSNBRG00000016487)	TMEM169 (ENSNBRG00000016609)	PFKL (ENSNBRG00000016638)	MAP3K13 (ENSNBRG00000016703)	ENSNBRG00000016764	trpm2 (ENSNBRG00000016802)	ENSNBRG00000016863	hycc2 (ENSNBRG00000017132)	ENSNBRG00000017163	DIP2A (ENSNBRG00000017189)	ENSNBRG00000017248	ENSNBRG00000017262	prmt2 (ENSNBRG00000017273)	ercc1 (ENSNBRG00000017310)
Nile tilapia	MODERN SPECIES	7	pttg1ipb (ENSONIG00000008999)	ENSONIG00000009002	glb1l (ENSONIG00000009015)	ANKZF1 (ENSONIG00000009018)	ENSONIG00000009020	ENSONIG00000009023	tra2b (ENSONIG00000009025)	igf2bp2a (ENSONIG00000009029)	tmem41aa (ENSONIG00000040431)	ehhadh (ENSONIG00000036880)	zgc:162707 (ENSONIG00000029797)	nme9 (ENSONIG00000009034)	SMARCAL1 (ENSONIG00000009036)	MARCHF4 (ENSONIG00000009038)	ENSONIG00000036866	ENSONIG00000034118 #22	ENSONIG00000009040 #22	COL6A2 (ENSONIG00000009044)	xrcc5 (ENSONIG00000009057)	tmem169 (ENSONIG00000036428)	PFKL (ENSONIG00000009075)	MAP3K13 (ENSONIG00000009084)	trpm2 (ENSONIG00000009086)	fam126b (ENSONIG00000031870)	ENSONIG00000009095	ENSONIG00000032971	DIP2A (ENSONIG00000009096)	ENSONIG00000040443	ENSONIG00000037894	ENSONIG00000036478	prmt2 (ENSONIG00000004127)
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.r	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275
Burton s mouthbrooder	MODERN SPECIES	292	sumo3b (ENSHBUG00000003354)	ENSHBUG00000003346	ENSHBUG00000003332	glb1l (ENSHBUG00000003243)	ANKZF1 (ENSHBUG00000003208)	ENSHBUG00000003190	ENSHBUG00000003161	tra2b (ENSHBUG00000003145)	igf2bp2a (ENSHBUG00000003126)	tmem41aa (ENSHBUG00000003047)	ehhadh (ENSHBUG00000003028)	zgc:162707 (ENSHBUG00000003020)	nme9 (ENSHBUG00000003004)	SMARCAL1 (ENSHBUG00000002973)	MARCHF4 (ENSHBUG00000000068)	ENSHBUG00000002949 #22	COL6A2 (ENSHBUG00000002922)	xrcc5 (ENSHBUG00000002906)	TMEM169 (ENSHBUG00000002883)	PFKL (ENSHBUG00000002877)	MAP3K13 (ENSHBUG00000002814)	trpm2 (ENSHBUG00000002764)	hycc2 (ENSHBUG00000001171)	ENSHBUG00000001010	DIP2A (ENSHBUG00000002696)	ENSHBUG00000002573	ENSHBUG00000002551	ENSHBUG00000002524	prmt2 (ENSHBUG00000002521)	ercc1 (ENSHBUG00000002515)	ENSHBUG00000002501
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000177394	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000165332.B	ENSGT00940000160683
P. nyererei	MODERN SPECIES	304	ENSPNYG00000001380	glb1l (ENSPNYG00000001327)	ANKZF1 (ENSPNYG00000001310)	ENSPNYG00000001277	ENSPNYG00000001248	tra2b (ENSPNYG00000001238)	igf2bp2a (ENSPNYG00000001187)	ENSPNYG00000001166	ehhadh (ENSPNYG00000001157)	zgc:162707 (ENSPNYG00000001153)	nme9 (ENSPNYG00000001110)	ENSPNYG00000001099	SMARCAL1 (ENSPNYG00000001058)	MARCHF4 (ENSPNYG00000000999)	ENSPNYG00000000972 #22	ENSPNYG00000000965 #22	ENSPNYG00000000944	ENSPNYG00000000925	xrcc5 (ENSPNYG00000000911)	TMEM169 (ENSPNYG00000000898)	PFKL (ENSPNYG00000000802)	MAP3K13 (ENSPNYG00000000790)	trpm2 (ENSPNYG00000000679)	hycc2 (ENSPNYG00000019965)	ENSPNYG00000019883	DIP2A (ENSPNYG00000019802)	ENSPNYG00000019776	ENSPNYG00000019740	ENSPNYG00000019701	ENSPNYG00000019666	ENSPNYG00000019648
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913	ENSGT00940000163412	ENSGT00940000157516	ENSGT00390000006618	ENSGT00940000164537	ENSGT00940000157608	ENSGT00940000158179.b	ENSGT00950000183126.a.p.a.o.a #22	ENSGT00950000183126.a.p.a.o.b #22	ENSGT01030000235116	ENSGT00940000155682.g.a	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000159292	ENSGT00940000158216	ENSGT00940000156404	ENSGT00390000011295.a	ENSGT00530000064199	ENSGT00950000182997.a.b.b.a	ENSGT00940000164866.q.a.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.b.a	ENSGT00940000160683	ENSGT00940000165332.B
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005007928	glb1l (ENSMZEG00005007880)	ANKZF1 (ENSMZEG00005007906)	ENSMZEG00005007865	ENSMZEG00005007848	tra2b (ENSMZEG00005007817)	igf2bp2a (ENSMZEG00005007777)	tmem41aa (ENSMZEG00005007760)	ehhadh (ENSMZEG00005007744)	zgc:162707 (ENSMZEG00005007724)	nme9 (ENSMZEG00005007697)	ENSMZEG00005007691	SMARCAL1 (ENSMZEG00005007660)	MARCHF4 (ENSMZEG00005007652)	ENSMZEG00005007645 #22	ENSMZEG00005007629 #22	ENSMZEG00005007621	ENSMZEG00005007607	xrcc5 (ENSMZEG00005007591)	TMEM169 (ENSMZEG00005007585)	TANC1 (ENSMZEG00005007557)	WDSUB1 (ENSMZEG00005007538)	ENSMZEG00005007519	BAZ2B (ENSMZEG00005007380)	CD302 (ENSMZEG00005007347)	RBMS1 (ENSMZEG00005007313)	tank (ENSMZEG00005007292)	tbr1b (ENSMZEG00005007278)	SLC4A10 (ENSMZEG00005007236)	gcgb (ENSMZEG00005007228)	ENSMZEG00005007202
Zebra mbuna	MODERN SPECIES	1007																ENSMZEG00005025041 #22	ENSMZEG00005025039
Eastern happy	MODERN SPECIES	7	ENSACLG00000015103	ENSACLG00000015115	ENSACLG00000015141	glb1l (ENSACLG00000015236)	ANKZF1 (ENSACLG00000015301)	ENSACLG00000015369	ENSACLG00000015432	tra2b (ENSACLG00000015461)	igf2bp2a (ENSACLG00000015512)	tmem41aa (ENSACLG00000015796)	ehhadh (ENSACLG00000015819)	zgc:162707 (ENSACLG00000015853)	nme9 (ENSACLG00000015875)	SMARCAL1 (ENSACLG00000015990)	MARCHF4 (ENSACLG00000016071)	ENSACLG00000016093 #22	ENSACLG00000016169 #22	COL6A2 (ENSACLG00000016186)	xrcc5 (ENSACLG00000016331)	TMEM169 (ENSACLG00000016388)	PFKL (ENSACLG00000016404)	MAP3K13 (ENSACLG00000016481)	trpm2 (ENSACLG00000016644)	hycc2 (ENSACLG00000016763)	ENSACLG00000016906	DIP2A (ENSACLG00000016955)	ENSACLG00000017309	ENSACLG00000017318	ENSACLG00000017330	ENSACLG00000017436	prmt2 (ENSACLG00000017462)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000009002	glb1l (ENSONIG00000009015)	ANKZF1 (ENSONIG00000009018)	ENSONIG00000009020	ENSONIG00000009023	tra2b (ENSONIG00000009025)	igf2bp2a (ENSONIG00000009029)	tmem41aa (ENSONIG00000040431)	ehhadh (ENSONIG00000036880)	zgc:162707 (ENSONIG00000029797)	nme9 (ENSONIG00000009034)	SMARCAL1 (ENSONIG00000009036)	MARCHF4 (ENSONIG00000009038)	ENSONIG00000036866	ENSONIG00000034118 #22	ENSONIG00000009040 #22	COL6A2 (ENSONIG00000009044)	xrcc5 (ENSONIG00000009057)	tmem169 (ENSONIG00000036428)	PFKL (ENSONIG00000009075)	MAP3K13 (ENSONIG00000009084)	trpm2 (ENSONIG00000009086)	fam126b (ENSONIG00000031870)	ENSONIG00000009095	ENSONIG00000032971	DIP2A (ENSONIG00000009096)	ENSONIG00000040443	ENSONIG00000037894	ENSONIG00000036478	prmt2 (ENSONIG00000004127)	ercc1 (ENSONIG00000004132)
Midas cichlid	MODERN SPECIES	1312	ENSACIG00000000950	ENSACIG00000000965	glb1l (ENSACIG00000001086)	ANKZF1 (ENSACIG00000001142)	ENSACIG00000001218	ENSACIG00000001261	tra2b (ENSACIG00000001289)	igf2bp2a (ENSACIG00000001308)	tmem41aa (ENSACIG00000001348)	ehhadh (ENSACIG00000001368)	zgc:162707 (ENSACIG00000001437)	nme9 (ENSACIG00000001452)	ENSACIG00000001490	SMARCAL1 (ENSACIG00000001500)	MARCHF4 (ENSACIG00000001550)	ENSACIG00000001602 #22	ENSACIG00000001629	ENSACIG00000001656	xrcc5 (ENSACIG00000001685)	TMEM169 (ENSACIG00000001883)	PFKL (ENSACIG00000001893)	MAP3K13 (ENSACIG00000001962)	ENSACIG00000002000	ENSACIG00000002037	hycc2 (ENSACIG00000002107)	ENSACIG00000002126	DIP2A (ENSACIG00000002167)
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p #22
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a #22
Nile tilapia	MODERN SPECIES	14	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743	ENSONIG00000019178	ENSONIG00000037554
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a #22
Haplochromini	DUPLICATION
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000178684	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22
Burton s mouthbrooder	MODERN SPECIES	1287															ENSHBUG00000004296 #22	ENSHBUG00000004315 #22
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
P. nyererei	MODERN SPECIES	517								ENSPNYG00000011786	ENSPNYG00000011795	ect2 (ENSPNYG00000011865)	b3gnt5a (ENSPNYG00000012144)	rfc4 (ENSPNYG00000012167)	ENSPNYG00000012238	ENSPNYG00000012280	ENSPNYG00000012285 #22	ENSPNYG00000012311 #22	ENSPNYG00000012335	ENSPNYG00000012372	ENSPNYG00000012391	ENSPNYG00000012438	ENSPNYG00000012458	ENSPNYG00000012506	ENSPNYG00000012547
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
Zebra mbuna	MODERN SPECIES	695															ENSMZEG00005025694 #22	ENSMZEG00005025695 #22
Eastern happy	MODERN SPECIES	14	ENSACLG00000027119	ENSACLG00000027141	NAALADL2 (ENSACLG00000027187)	ENSACLG00000027197	ENSACLG00000027252	nlgn1 (ENSACLG00000000999)	ENSACLG00000001096	ENSACLG00000001206	ect2 (ENSACLG00000001221)	ENSACLG00000001304	b3gnt5a (ENSACLG00000001344)	rfc4 (ENSACLG00000001349)	ENSACLG00000001397	ENSACLG00000001417	ENSACLG00000001432 #22	ENSACLG00000001494 #22	ENSACLG00000001533	ENSACLG00000001546	ENSACLG00000001610	ENSACLG00000001625	ENSACLG00000001664	ENSACLG00000001685	ENSACLG00000001726	ENSACLG00000001729	fzd7a (ENSACLG00000002099)	cdk15 (ENSACLG00000002120)	ftcd (ENSACLG00000002191)	ENSACLG00000002248	ENSACLG00000002266	ENSACLG00000002292	abi3bpb (ENSACLG00000002308)
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.a.b #22
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1105	XDH (ENSMZEG00005012009)	tspan7b (ENSMZEG00005011993)	mid1ip1b (ENSMZEG00005011984)	bcor (ENSMZEG00005011975)	FAIM (ENSMZEG00005011968)	ralbb (ENSMZEG00005011961)	INHBB (ENSMZEG00005011953)	gli2b (ENSMZEG00005011934)	ENSMZEG00005011924	ENSMZEG00005011919	ENSMZEG00005011900	ENSMZEG00005011892	ENSMZEG00005011876	ENSMZEG00005011870	ENSMZEG00005011839	ENSMZEG00005011819 #22	ENSMZEG00005011665 #22	ENSMZEG00005011644	ENSMZEG00005011636	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257
Zebra mbuna	MODERN SPECIES	1105	tspan7b (ENSMZEG00005011993)	mid1ip1b (ENSMZEG00005011984)	bcor (ENSMZEG00005011975)	FAIM (ENSMZEG00005011968)	ralbb (ENSMZEG00005011961)	INHBB (ENSMZEG00005011953)	gli2b (ENSMZEG00005011934)	ENSMZEG00005011924	ENSMZEG00005011919	ENSMZEG00005011900	ENSMZEG00005011892	ENSMZEG00005011876	ENSMZEG00005011870	ENSMZEG00005011839	ENSMZEG00005011819 #22	ENSMZEG00005011665 #22	ENSMZEG00005011644	ENSMZEG00005011636	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257	rfc4 (ENSMZEG00005011212)
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.b #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.a.b #22
Lyretail cichlid	MODERN SPECIES	376			ENSNBRG00000011334	ENSNBRG00000011343	ENSNBRG00000011360	ENSNBRG00000011412	ENSNBRG00000011440	NAALADL2 (ENSNBRG00000011456)	ENSNBRG00000011508	nlgn1 (ENSNBRG00000011573)	ect2 (ENSNBRG00000011603)	ENSNBRG00000011659	b3gnt5a (ENSNBRG00000011825)	ENSNBRG00000011833	rfc4 (ENSNBRG00000011864)	ENSNBRG00000011949 #22	ENSNBRG00000011989	ENSNBRG00000012010	ENSNBRG00000012019	ENSNBRG00000012040	ENSNBRG00000012084	ENSNBRG00000012090	ENSNBRG00000012124	ENSNBRG00000012248	ENSNBRG00000012263	ENSNBRG00000012280	ENSNBRG00000012349	ENSNBRG00000012361	ENSNBRG00000012374	fzd7a (ENSNBRG00000012390)	cdk15 (ENSNBRG00000012405)
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000161304.a.a	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000178684	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22
Burton s mouthbrooder	MODERN SPECIES	1287																ENSHBUG00000004296 #22	ENSHBUG00000004315 #22
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00390000014380.h.b.b.i.b.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
P. nyererei	MODERN SPECIES	517									ENSPNYG00000011786	ENSPNYG00000011795	ect2 (ENSPNYG00000011865)	b3gnt5a (ENSPNYG00000012144)	rfc4 (ENSPNYG00000012167)	ENSPNYG00000012238	ENSPNYG00000012280	ENSPNYG00000012285 #22	ENSPNYG00000012311 #22	ENSPNYG00000012335	ENSPNYG00000012372	ENSPNYG00000012391	ENSPNYG00000012438	ENSPNYG00000012458	ENSPNYG00000012506	ENSPNYG00000012547
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000161304.a.a	ENSGT00390000002505	ENSGT00940000156539.y	ENSGT00940000157769	ENSGT00950000183111.b.a.b	ENSGT00950000183039.B.b.c	ENSGT00940000153421.a.a.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00940000170955.c	ENSGT00940000156299	ENSGT00940000159676.a	ENSGT00940000161734	ENSGT00550000074917	ENSGT00940000176853.B.d.a	ENSGT00950000183126.a.p.a.p.a.b #22	ENSGT00950000183126.a.p.a.p.a.a.a #22	ENSGT00940000176853.B.d.b	ENSGT00940000176853.B.c.b
Eastern happy	MODERN SPECIES	14	MEP1B (ENSACLG00000027103)	ENSACLG00000027119	ENSACLG00000027141	NAALADL2 (ENSACLG00000027187)	ENSACLG00000027197	ENSACLG00000027252	nlgn1 (ENSACLG00000000999)	ENSACLG00000001096	ENSACLG00000001206	ect2 (ENSACLG00000001221)	ENSACLG00000001304	b3gnt5a (ENSACLG00000001344)	rfc4 (ENSACLG00000001349)	ENSACLG00000001397	ENSACLG00000001417	ENSACLG00000001432 #22	ENSACLG00000001494 #22	ENSACLG00000001533	ENSACLG00000001546	ENSACLG00000001610	ENSACLG00000001625	ENSACLG00000001664	ENSACLG00000001685	ENSACLG00000001726	ENSACLG00000001729	fzd7a (ENSACLG00000002099)	cdk15 (ENSACLG00000002120)	ftcd (ENSACLG00000002191)	ENSACLG00000002248	ENSACLG00000002266	ENSACLG00000002292
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	695																ENSMZEG00005025694 #22	ENSMZEG00005025695 #22
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005011610	ENSMZEG00005011607	NAALADL2 (ENSMZEG00005011591)	ENSMZEG00005011569	ENSMZEG00005011562	nlgn1 (ENSMZEG00005011548)	ENSMZEG00005011539	ENSMZEG00005011529	ENSMZEG00005011520	ect2 (ENSMZEG00005011398)	b3gnt5a (ENSMZEG00005011363)	ENSMZEG00005011257	rfc4 (ENSMZEG00005011212)	ENSMZEG00005011201	ENSMZEG00005011195	ENSMZEG00005011187 #22	ENSMZEG00005011174	uhmk1 (ENSMZEG00005011160)	akr1a1b (ENSMZEG00005011146)	ENSMZEG00005011137	SHISAL2A (ENSMZEG00005011101)	ENSMZEG00005011087	slc1a7b (ENSMZEG00005011061)	ENSMZEG00005011029	PODN (ENSMZEG00005010982)	scp2b (ENSMZEG00005010972)	cpt2 (ENSMZEG00005010955)	magoh (ENSMZEG00005010964)	aatf (ENSMZEG00005010945)	ENSMZEG00005010941	uck2a (ENSMZEG00005010927)
Nile tilapia	MODERN SPECIES	14	akr1a1b (ENSONIG00000019210)	uhmk1 (ENSONIG00000019209)	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.p.b #22
Nile tilapia	MODERN SPECIES	14	uhmk1 (ENSONIG00000019209)	mep1ba (ENSONIG00000019207)	ENSONIG00000030541	ENSONIG00000019205	NAALADL2 (ENSONIG00000019204)	nlgn1 (ENSONIG00000029648)	ect2 (ENSONIG00000019196)	b3gnt5a (ENSONIG00000021188)	ENSONIG00000019195	rfc4 (ENSONIG00000019192)	ENSONIG00000037060	ENSONIG00000042553	ENSONIG00000038697	ENSONIG00000033562	ENSONIG00000019190 #22	ENSONIG00000028785 #22	ENSONIG00000019189 #22	ENSONIG00000036367	ENSONIG00000028604	ENSONIG00000033887	ENSONIG00000036247	ENSONIG00000019187	ENSONIG00000037376	ENSONIG00000003985	ENSONIG00000029828	ENSONIG00000033256	ENSONIG00000014874	ENSONIG00000019181	ENSONIG00000033704	ENSONIG00000031743	ENSONIG00000019178
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	521															ENSACIG00000005521 #22	ENSACIG00000005541 #22	ENSACIG00000005559 #22
Midas cichlid	MODERN SPECIES	137												ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	MODERN SPECIES	137															ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	MODERN SPECIES	137														ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	841																ENSACIG00000021370 #22
Midas cichlid	MODERN SPECIES	1668																ENSACIG00000005037 #22
Midas cichlid	MODERN SPECIES	1656																ENSACIG00000004921 #22
Midas cichlid	MODERN SPECIES	521														ENSACIG00000005521 #22	ENSACIG00000005541 #22	ENSACIG00000005559 #22
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	137												ENSACIG00000011355 #22	ENSACIG00000011372 #22	ENSACIG00000011388 #22	ENSACIG00000011398 #22	ENSACIG00000011433 #22
Midas cichlid	MODERN SPECIES	521														ENSACIG00000005559 #22	ENSACIG00000005541 #22	ENSACIG00000005521 #22
Midas cichlid	MODERN SPECIES	137													ENSACIG00000011433 #22	ENSACIG00000011398 #22	ENSACIG00000011388 #22	ENSACIG00000011372 #22	ENSACIG00000011355 #22
Pomacentridae	ANCESTRAL SPECIES	91																ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Pomacentridae_A	DUPLICATION
Pomacentridae_A	DUPLICATION
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.q.a #22
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00940000155808	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT01040000240451.a.b.a	ENSGT00940000155330.b	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c.k.a	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.b	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b	ENSGT00950000183126.a.p.a.q.b #22	ENSGT00950000183126.a.p.a.q.a #22
Orange clownfish	MODERN SPECIES	22	kansl2 (ENSAPEG00000016543)	ENSAPEG00000016486	TMBIM6 (ENSAPEG00000016442)	ctdsp2 (ENSAPEG00000016417)	SLC11A2 (ENSAPEG00000016358)	MARCHF9 (ENSAPEG00000016342)	tspan31 (ENSAPEG00000016316)	agap2 (ENSAPEG00000016168)	ENSAPEG00000016120	gpr182 (ENSAPEG00000016114)	ENSAPEG00000016063	igfbp6b (ENSAPEG00000016029)	spryd3 (ENSAPEG00000015977)	lima1a (ENSAPEG00000015952)	ENSAPEG00000015936 #22	ENSAPEG00000015918 #22	ENSAPEG00000015819	osbpl2b (ENSAPEG00000015765)	BSN (ENSAPEG00000015660)	ENSAPEG00000015637	tmem115 (ENSAPEG00000015629)	ENSAPEG00000015619	sema3h (ENSAPEG00000015575)	ENSAPEG00000015560	borcs6 (ENSAPEG00000015544)	si:dkey-72l14.3 (ENSAPEG00000015532)	xpc (ENSAPEG00000015503)	ENSAPEG00000015494	arih2 (ENSAPEG00000015440)	impdh2 (ENSAPEG00000015339)	dalrd3 (ENSAPEG00000015102)
Clown anemonefish	MODERN SPECIES	2911															ENSAOCG00000009581 #22	ENSAOCG00000009632 #22
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	3714																ENSAPOG00000020898 #22
Spiny chromis	MODERN SPECIES	3431																ENSAPOG00000013675 #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.q.b #22
Amphiprion	ANCESTRAL SPECIES	75															ENSGT00950000183126.a.p.a.q.a #22	ENSGT00950000183126.a.p.a.q.b #22	ENSGT00940000158313.a.b	ENSGT00940000158675.a	ENSGT00940000160528.b	ENSGT00940000156890.a.b	ENSGT00940000154307.D	ENSGT00940000160722	ENSGT00940000158956.c.k.a	ENSGT00940000160351	ENSGT00940000158208.a.a	ENSGT00940000155330.b	ENSGT01040000240451.a.b.a	ENSGT01050000244940.a.a	ENSGT00530000063607.a	ENSGT00940000155808	ENSGT00940000159544
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	1961																ENSAOCG00000007054 #22	ENSAOCG00000006996
Clown anemonefish	MODERN SPECIES	2911															ENSAOCG00000009632 #22	ENSAOCG00000009581 #22
Orange clownfish	MODERN SPECIES	22	impdh2 (ENSAPEG00000015339)	arih2 (ENSAPEG00000015440)	ENSAPEG00000015494	xpc (ENSAPEG00000015503)	si:dkey-72l14.3 (ENSAPEG00000015532)	borcs6 (ENSAPEG00000015544)	ENSAPEG00000015560	sema3h (ENSAPEG00000015575)	ENSAPEG00000015619	tmem115 (ENSAPEG00000015629)	ENSAPEG00000015637	BSN (ENSAPEG00000015660)	osbpl2b (ENSAPEG00000015765)	ENSAPEG00000015819	ENSAPEG00000015918 #22	ENSAPEG00000015936 #22	lima1a (ENSAPEG00000015952)	spryd3 (ENSAPEG00000015977)	igfbp6b (ENSAPEG00000016029)	ENSAPEG00000016063	gpr182 (ENSAPEG00000016114)	ENSAPEG00000016120	agap2 (ENSAPEG00000016168)	tspan31 (ENSAPEG00000016316)	MARCHF9 (ENSAPEG00000016342)	SLC11A2 (ENSAPEG00000016358)	ctdsp2 (ENSAPEG00000016417)	TMBIM6 (ENSAPEG00000016442)	ENSAPEG00000016486	kansl2 (ENSAPEG00000016543)	ccnt1 (ENSAPEG00000016595)
Pomacentridae_A	ANCESTRAL SPECIES	90																ENSGT00950000183126.a.p.a.r #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000178820	ENSGT00940000159085	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000164042.b	ENSGT00940000163299.A.b.c.a.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00950000183126.a.p.a.r #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Orange clownfish	MODERN SPECIES	22	taf13 (ENSAPEG00000018684)	tnnc2.2 (ENSAPEG00000018661)	TNNC2 (ENSAPEG00000018641)	ENSAPEG00000018623	ENSAPEG00000018608	ENSAPEG00000018585	lamb2 (ENSAPEG00000018433)	ENSAPEG00000018414	USP19 (ENSAPEG00000018313)	ENSAPEG00000018292	ENSAPEG00000018286	ENSAPEG00000018249	ENSAPEG00000018207	ENSAPEG00000018124	pim1 (ENSAPEG00000018085)	ENSAPEG00000018070 #22	ENSAPEG00000017962	rpl10 (ENSAPEG00000017924)	FLNA (ENSAPEG00000017783)	emd (ENSAPEG00000017765)	ENSAPEG00000017751	MRPL49 (ENSAPEG00000017747)	ENSAPEG00000017725	las1l (ENSAPEG00000017716)	ENSAPEG00000017704	ENSAPEG00000017698	atp2b3b (ENSAPEG00000017617)	ccnq (ENSAPEG00000017577)	cfap126 (ENSAPEG00000017570)	zgc:101663 (ENSAPEG00000017560)	ap4b1 (ENSAPEG00000017536)
Clown anemonefish	MODERN SPECIES	3649															pim1 (ENSAOCG00000019060)	ENSAOCG00000019034 #22	ENSAOCG00000019015	rpl10 (ENSAOCG00000018987)	FLNA (ENSAOCG00000018939)	emd (ENSAOCG00000018813)	ENSAOCG00000018797	MRPL49 (ENSAOCG00000018785)	ENSAOCG00000018763	las1l (ENSAOCG00000018717)	ENSAOCG00000018705	ENSAOCG00000018692	atp2b3a (ENSAOCG00000018660)
Spiny chromis	MODERN SPECIES	3297																ENSAPOG00000021143 #22
Bicolor damselfish	MODERN SPECIES	1499																ENSSPAG00000000560 #22	ENSSPAG00000000543	rpl10 (ENSSPAG00000000497)	FLNA (ENSSPAG00000000341)	emd (ENSSPAG00000000322)	ENSSPAG00000000313	MRPL49 (ENSSPAG00000000302)	ENSSPAG00000000294	las1l (ENSSPAG00000000289)	ENSSPAG00000000285
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Large yellow croaker	DUPLICATION
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	487	sephs3 (ENSLCRG00005019304)	ap4b1 (ENSLCRG00005019299)	zgc:101663 (ENSLCRG00005019287)	cfap126 (ENSLCRG00005019280)	ccnq (ENSLCRG00005019271)	atp2b3b (ENSLCRG00005019207)	ENSLCRG00005019127	las1l (ENSLCRG00005019124)	ENSLCRG00005019119	MRPL49 (ENSLCRG00005019115)	ENSLCRG00005019112	FLNA (ENSLCRG00005018755)	rpl10 (ENSLCRG00005018675)	ENSLCRG00005018656	ENSLCRG00005018651	ENSLCRG00005018647 #22	ENSLCRG00005018645	ENSLCRG00005018634 #22	prkcz (ENSLCRG00005018463)	skia (ENSLCRG00005018359) #7	si:ch211-251b21.1 (ENSLCRG00005018335) #17	plch2a (ENSLCRG00005018214) #14	pex10 (ENSLCRG00005018145) #12	renbp (ENSLCRG00005018138)	ENSLCRG00005018134	ENSLCRG00005018130	dennd2da (ENSLCRG00005018105)	stk38a (ENSLCRG00005018053)	MTCH1 (ENSLCRG00005018024)	stk35 (ENSLCRG00005018003)	pdyn (ENSLCRG00005017994)
Large yellow croaker	MODERN SPECIES	487	zgc:101663 (ENSLCRG00005019287)	cfap126 (ENSLCRG00005019280)	ccnq (ENSLCRG00005019271)	atp2b3b (ENSLCRG00005019207)	ENSLCRG00005019127	las1l (ENSLCRG00005019124)	ENSLCRG00005019119	MRPL49 (ENSLCRG00005019115)	ENSLCRG00005019112	FLNA (ENSLCRG00005018755)	rpl10 (ENSLCRG00005018675)	ENSLCRG00005018656	ENSLCRG00005018651	ENSLCRG00005018647 #22	ENSLCRG00005018645	ENSLCRG00005018634 #22	prkcz (ENSLCRG00005018463)	skia (ENSLCRG00005018359) #7	si:ch211-251b21.1 (ENSLCRG00005018335) #17	plch2a (ENSLCRG00005018214) #14	pex10 (ENSLCRG00005018145) #12	renbp (ENSLCRG00005018138)	ENSLCRG00005018134	ENSLCRG00005018130	dennd2da (ENSLCRG00005018105)	stk38a (ENSLCRG00005018053)	MTCH1 (ENSLCRG00005018024)	stk35 (ENSLCRG00005018003)	pdyn (ENSLCRG00005017994)	GMEB2 (ENSLCRG00005017975)	tpk2 (ENSLCRG00005017962)
Large yellow croaker	DUPLICATION
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011177	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274	ENSLCRG00005002315
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011175	ENSLCRG00005011177	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011179	ENSLCRG00005011181	exoc2 (ENSLCRG00005011191)	foxq1b (ENSLCRG00005011207)	ENSLCRG00005011210	foxc1b (ENSLCRG00005011211)	gmds (ENSLCRG00005011216)	MYLK4 (ENSLCRG00005011276)	ENSLCRG00005011279	bmb (ENSLCRG00005011333)	pycr3 (ENSLCRG00005011338)	ENSLCRG00005011342	ENSLCRG00005011349	ENSLCRG00005011465 #22	ENSLCRG00005011469 #22	ENSLCRG00005011471 #22	NOS1AP (ENSLCRG00005011474)	ENSLCRG00005011479	ENSLCRG00005011481	ADCYAP1R1 (ENSLCRG00005011512)	ENSLCRG00005015010	ENSLCRG00005015011	ZC3H3 (ENSLCRG00005000788)	mafaa (ENSLCRG00005000798)	atpaf1 (ENSLCRG00005000801)	RHPN1 (ENSLCRG00005000827)	TUT4 (ENSLCRG00005000937)	gpx7 (ENSLCRG00005002246)	ENSLCRG00005002274	ENSLCRG00005002315	ENSLCRG00005002312
Large yellow croaker	MODERN SPECIES	475																ENSLCRG00005003295 #22
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	MODERN SPECIES	138															ENSDLAG00005032698 #22	ENSDLAG00005028473 #22
European seabass	MODERN SPECIES	14	ENSDLAG00005034377	ENSDLAG00005028449	ENSDLAG00005021048	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021209 #14	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005031668	ENSDLAG00005030875	ENSDLAG00005021303 #7	ENSDLAG00005021334	ENSDLAG00005003670 #22	ENSDLAG00005021641 #22	ENSDLAG00005029036 #22	ENSDLAG00005028433 #22	ENSDLAG00005006462 #22	ENSDLAG00005032911 #22	ENSDLAG00005016178 #22	ENSDLAG00005021656	ENSDLAG00005021663	ENSDLAG00005021707	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021793	ENSDLAG00005005446	ENSDLAG00005029120	ENSDLAG00005031172	ENSDLAG00005030606	ENSDLAG00005032610	ENSDLAG00005027962	ENSDLAG00005005457	ENSDLAG00005028990	atp2b3b (ENSDLAG00005005470)
European seabass	MODERN SPECIES	14	ENSDLAG00005028990	ENSDLAG00005005457	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185
European seabass	MODERN SPECIES	138															ENSDLAG00005028473 #22	ENSDLAG00005032698 #22
European seabass	DUPLICATION
European seabass	MODERN SPECIES	14	ENSDLAG00005028449	ENSDLAG00005021048	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021209 #14	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005031668	ENSDLAG00005030875	ENSDLAG00005021303 #7	ENSDLAG00005021334	ENSDLAG00005003670 #22	ENSDLAG00005021641 #22	ENSDLAG00005029036 #22	ENSDLAG00005028433 #22	ENSDLAG00005006462 #22	ENSDLAG00005032911 #22	ENSDLAG00005016178 #22	ENSDLAG00005021656	ENSDLAG00005021663	ENSDLAG00005021707	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021793	ENSDLAG00005005446	ENSDLAG00005029120	ENSDLAG00005031172	ENSDLAG00005030606	ENSDLAG00005032610	ENSDLAG00005027962	ENSDLAG00005005457	ENSDLAG00005028990	atp2b3b (ENSDLAG00005005470)	ENSDLAG00005028702
European seabass	MODERN SPECIES	14	ENSDLAG00005005457	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790
European seabass	MODERN SPECIES	14	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953	stk35 (ENSDLAG00005020931)	ENSDLAG00005020929
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	7	ube2d3 (ENSSAUG00010017230)	ENSSAUG00010017738	CPXM1 (ENSSAUG00010017743)	wdr32 (ENSSAUG00010017798)	HHIPL2 (ENSSAUG00010017799)	marc1 (ENSSAUG00010017800)	ENSSAUG00010017801	ezra (ENSSAUG00010017803)	nenf (ENSSAUG00010017830)	pacc1 (ENSSAUG00010017831)	ZNF106 (ENSSAUG00010017835)	capn3a (ENSSAUG00010017861)	GANC (ENSSAUG00010018132)	ENSSAUG00010020239 #22	ENSSAUG00010020246	ENSSAUG00010020248 #22	TMEM87A (ENSSAUG00010020251)	vps39 (ENSSAUG00010020269)	numb (ENSSAUG00010020742)	exd2 (ENSSAUG00010020758)	ENSSAUG00010020761	ENSSAUG00010020762	erh (ENSSAUG00010020765)	psen1 (ENSSAUG00010020771)	PAPLN (ENSSAUG00010020777)	ENSSAUG00010020779	ENSSAUG00010020780	ENSSAUG00010020781	ENSSAUG00010020783	ENSSAUG00010020785	ENSSAUG00010020786
Gilthead seabream	MODERN SPECIES	7	SLC39A8 (ENSSAUG00010017219)	manba (ENSSAUG00010017222)	ube2d3 (ENSSAUG00010017230)	ENSSAUG00010017738	CPXM1 (ENSSAUG00010017743)	wdr32 (ENSSAUG00010017798)	HHIPL2 (ENSSAUG00010017799)	marc1 (ENSSAUG00010017800)	ENSSAUG00010017801	ezra (ENSSAUG00010017803)	nenf (ENSSAUG00010017830)	pacc1 (ENSSAUG00010017831)	ZNF106 (ENSSAUG00010017835)	capn3a (ENSSAUG00010017861)	GANC (ENSSAUG00010018132)	ENSSAUG00010020239 #22	ENSSAUG00010020246	ENSSAUG00010020248 #22	TMEM87A (ENSSAUG00010020251)	vps39 (ENSSAUG00010020269)	numb (ENSSAUG00010020742)	exd2 (ENSSAUG00010020758)	ENSSAUG00010020761	ENSSAUG00010020762	erh (ENSSAUG00010020765)	psen1 (ENSSAUG00010020771)	PAPLN (ENSSAUG00010020777)	ENSSAUG00010020779	ENSSAUG00010020780	ENSSAUG00010020781	ENSSAUG00010020783
Gilthead seabream	MODERN SPECIES	21	tpx2 (ENSSAUG00010022075)	ENSSAUG00010022090	tpk2 (ENSSAUG00010022091)	ENSSAUG00010022093	ENSSAUG00010022094	GMEB2 (ENSSAUG00010022097)	pdyn (ENSSAUG00010022098)	ENSSAUG00010022100	ENSSAUG00010022102	stk35 (ENSSAUG00010022103)	MTCH1 (ENSSAUG00010022104)	ENSSAUG00010022111	dedd (ENSSAUG00010022825)	ENSSAUG00010022826	kcnab2b (ENSSAUG00010022828)	ENSSAUG00010022841 #22	ENSSAUG00010022843 #22	prkcz (ENSSAUG00010022848)	ENSSAUG00010022906	ENSSAUG00010022908	skia (ENSSAUG00010022911) #7	ENSSAUG00010022917	ENSSAUG00010022920	si:ch211-251b21.1 (ENSSAUG00010022930) #17	plch2a (ENSSAUG00010022935) #14	pex10 (ENSSAUG00010022946) #12	renbp (ENSSAUG00010022948)	ENSSAUG00010022949	ENSSAUG00010022950	rpl10 (ENSSAUG00010022951)	FLNA (ENSSAUG00010000588)
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b #22	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b #22	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B	ENSGT00950000182945.b.a.a.a.b.b.c.b
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	MTCH1 (ENSSLUG00000017038)	stk38a (ENSSLUG00000016983)	dennd2da (ENSSLUG00000016769)	ENSSLUG00000016746	ccr6a (ENSSLUG00000016736)	renbp (ENSSLUG00000016527)	pex10 (ENSSLUG00000016502) #12	ENSSLUG00000016471	ENSSLUG00000016461 #17	skia (ENSSLUG00000016443) #7	prkcz (ENSSLUG00000015208)	ENSSLUG00000015143 #22	ENSSLUG00000015139	ENSSLUG00000015133 #22	ENSSLUG00000015107 #22	ENSSLUG00000015088 #22	ENSSLUG00000015069	rpl10 (ENSSLUG00000015039)	FLNA (ENSSLUG00000013362)	emd (ENSSLUG00000013241)	ENSSLUG00000013239	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013236	ENSSLUG00000013229 #22	ENSSLUG00000013223	ENSSLUG00000013219	atp2b3b (ENSSLUG00000013076)	ccnq (ENSSLUG00000013050)	cfap126 (ENSSLUG00000013045)	zgc:101663 (ENSSLUG00000013044)	ap4b1 (ENSSLUG00000013003)
Pike perch	MODERN SPECIES	102	cfap126 (ENSSLUG00000013045)	ccnq (ENSSLUG00000013050)	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)	pdyn (ENSSLUG00000017107)
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	zgc:101663 (ENSSLUG00000013044)	cfap126 (ENSSLUG00000013045)	ccnq (ENSSLUG00000013050)	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)
Pike perch	MODERN SPECIES	549																ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	MODERN SPECIES	549															ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	102	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229 #22	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362)	rpl10 (ENSSLUG00000015039)	ENSSLUG00000015069	ENSSLUG00000015088 #22	ENSSLUG00000015107 #22	ENSSLUG00000015133 #22	ENSSLUG00000015139	ENSSLUG00000015143 #22	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443) #7	ENSSLUG00000016461 #17	ENSSLUG00000016471	pex10 (ENSSLUG00000016502) #12	renbp (ENSSLUG00000016527)	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)	MTCH1 (ENSSLUG00000017038)	stk35 (ENSSLUG00000017101)	pdyn (ENSSLUG00000017107)	GMEB2 (ENSSLUG00000017114)	tpk2 (ENSSLUG00000017119)
Pike perch	MODERN SPECIES	549														ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Pike perch	MODERN SPECIES	549													ENSSLUG00000007328 #22	ENSSLUG00000007337 #22	ENSSLUG00000007346 #22	ENSSLUG00000007358 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1503																ENSLBEG00000013767 #22	ENSLBEG00000013705 #22
Ballan wrasse	MODERN SPECIES	1503															ENSLBEG00000013767 #22	ENSLBEG00000013705 #22
Ballan wrasse	MODERN SPECIES	303				ENSLBEG00000015739	sox9a (ENSLBEG00000015835)	ENSLBEG00000015864	ENSLBEG00000015889	ENSLBEG00000015904	ENSLBEG00000015933	cox19 (ENSLBEG00000015957)	ENSLBEG00000015974	LMF1 (ENSLBEG00000016009)	RAB26 (ENSLBEG00000016067)	PEMT (ENSLBEG00000016106)	dnali1 (ENSLBEG00000016184)	ENSLBEG00000016312 #22
Ballan wrasse	MODERN SPECIES	3849																ENSLBEG00000018334 #22
Ballan wrasse	MODERN SPECIES	3023																ENSLBEG00000004495 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	187								SMCO4 (ENSLBEG00000013580)	nlk2 (ENSLBEG00000013526)	ENSLBEG00000013487	NLRX1 (ENSLBEG00000013386)	efhd1 (ENSLBEG00000013328)	kcnj13 (ENSLBEG00000013304)	GAL3ST2 (ENSLBEG00000013282)	ENSLBEG00000013249	ENSLBEG00000013230 #22	ENSLBEG00000013203 #22	ENSLBEG00000013182	ENSLBEG00000013165	slc37a4a (ENSLBEG00000013128)	slc37a4a (ENSLBEG00000013109)	trappc4 (ENSLBEG00000013080)	rps25 (ENSLBEG00000013063)	sgcg (ENSLBEG00000013026)	SACS (ENSLBEG00000012985)	ENSLBEG00000012942	MIPEP (ENSLBEG00000012788)	ENSLBEG00000012658	ENSLBEG00000012641	get1 (ENSLBEG00000012607)	sh3bgr (ENSLBEG00000012550)
Ballan wrasse	MODERN SPECIES	187							SMCO4 (ENSLBEG00000013580)	nlk2 (ENSLBEG00000013526)	ENSLBEG00000013487	NLRX1 (ENSLBEG00000013386)	efhd1 (ENSLBEG00000013328)	kcnj13 (ENSLBEG00000013304)	GAL3ST2 (ENSLBEG00000013282)	ENSLBEG00000013249	ENSLBEG00000013230 #22	ENSLBEG00000013203 #22	ENSLBEG00000013182	ENSLBEG00000013165	slc37a4a (ENSLBEG00000013128)	slc37a4a (ENSLBEG00000013109)	trappc4 (ENSLBEG00000013080)	rps25 (ENSLBEG00000013063)	sgcg (ENSLBEG00000013026)	SACS (ENSLBEG00000012985)	ENSLBEG00000012942	MIPEP (ENSLBEG00000012788)	ENSLBEG00000012658	ENSLBEG00000012641	get1 (ENSLBEG00000012607)	sh3bgr (ENSLBEG00000012550)	PCP4 (ENSLBEG00000012516)
Ballan wrasse	MODERN SPECIES	1463														ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1463															ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	MODERN SPECIES	1421															ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	MODERN SPECIES	31															ENSLBEG00000016810 #22	ENSLBEG00000016786 #22	ENSLBEG00000016745	prkcz (ENSLBEG00000016647)	skia (ENSLBEG00000016577) #7	si:ch211-251b21.1 (ENSLBEG00000016517) #17	plch2a (ENSLBEG00000016344) #14	pex10 (ENSLBEG00000016265) #12	renbp (ENSLBEG00000016211)	ENSLBEG00000016175	dennd2da (ENSLBEG00000016099)	stk38a (ENSLBEG00000016052)	MTCH1 (ENSLBEG00000016025)	stk35 (ENSLBEG00000015969)	pdyn (ENSLBEG00000015930)	GMEB2 (ENSLBEG00000015911)	tpk2 (ENSLBEG00000015877)
Ballan wrasse	MODERN SPECIES	2204																ENSLBEG00000013746 #22
Ballan wrasse	MODERN SPECIES	31	GMEB2 (ENSLBEG00000015911)	pdyn (ENSLBEG00000015930)	stk35 (ENSLBEG00000015969)	MTCH1 (ENSLBEG00000016025)	stk38a (ENSLBEG00000016052)	dennd2da (ENSLBEG00000016099)	ENSLBEG00000016175	renbp (ENSLBEG00000016211)	pex10 (ENSLBEG00000016265) #12	plch2a (ENSLBEG00000016344) #14	si:ch211-251b21.1 (ENSLBEG00000016517) #17	skia (ENSLBEG00000016577) #7	prkcz (ENSLBEG00000016647)	ENSLBEG00000016745	ENSLBEG00000016786 #22	ENSLBEG00000016810 #22
Ballan wrasse	MODERN SPECIES	553														ENSLBEG00000012118	ENSLBEG00000012038	ENSLBEG00000011996 #22	ENSLBEG00000011942 #22	sephs3 (ENSLBEG00000011912)	ap4b1 (ENSLBEG00000011810)	zgc:101663 (ENSLBEG00000011766)	cfap126 (ENSLBEG00000011728)	ccnq (ENSLBEG00000011703)	atp2b3b (ENSLBEG00000011637)	las1l (ENSLBEG00000011609)	ENSLBEG00000011597	ENSLBEG00000011572	MRPL49 (ENSLBEG00000011553)	ENSLBEG00000011522	ENSLBEG00000011495	FLNA (ENSLBEG00000011358)
Ballan wrasse	MODERN SPECIES	1463																ENSLBEG00000009424 #22	ENSLBEG00000009454 #22	ENSLBEG00000009496 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1510																ENSLBEG00000014106 #22	DIRAS1 (ENSLBEG00000014078)
Ballan wrasse	MODERN SPECIES	125	ENSLBEG00000009934	ENSLBEG00000010096	ENSLBEG00000010202	ENSLBEG00000010219	ENSLBEG00000010241	ENSLBEG00000010306	MMP15 (ENSLBEG00000010748)	zpd (ENSLBEG00000011400)	nup93 (ENSLBEG00000011518)	steep1 (ENSLBEG00000011613)	sc5d (ENSLBEG00000011633)	mt2 (ENSLBEG00000011663)	anapc13 (ENSLBEG00000011674)	ENSLBEG00000011691	rspry1 (ENSLBEG00000011719)	ENSLBEG00000011793 #22	arl2bp (ENSLBEG00000011826)	pllp (ENSLBEG00000011842)	GALNT8 (ENSLBEG00000011874)	ndufa9a (ENSLBEG00000012000)	DYRK4 (ENSLBEG00000012089)	wfdc1 (ENSLBEG00000012157)	ENSLBEG00000012179	kcng4a (ENSLBEG00000012220)	ENSLBEG00000012242	hsbp1a (ENSLBEG00000012270)	ENSLBEG00000012302	mlycd (ENSLBEG00000012362)	CDH13 (ENSLBEG00000012382)	ccnd2a (ENSLBEG00000012452)
Ballan wrasse	MODERN SPECIES	1421														ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	553			FLNA (ENSLBEG00000011358)	ENSLBEG00000011495	ENSLBEG00000011522	MRPL49 (ENSLBEG00000011553)	ENSLBEG00000011572	ENSLBEG00000011597	las1l (ENSLBEG00000011609)	atp2b3b (ENSLBEG00000011637)	ccnq (ENSLBEG00000011703)	cfap126 (ENSLBEG00000011728)	zgc:101663 (ENSLBEG00000011766)	ap4b1 (ENSLBEG00000011810)	sephs3 (ENSLBEG00000011912)	ENSLBEG00000011942 #22	ENSLBEG00000011996 #22	ENSLBEG00000012038	ENSLBEG00000012118
Ballan wrasse	MODERN SPECIES	1421																ENSLBEG00000006043 #22	ENSLBEG00000006100 #22	ENSLBEG00000006132 #22
Ballan wrasse	MODERN SPECIES	3685																ENSLBEG00000011143 #22
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Anabantoidei	ANCESTRAL SPECIES	84																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000028522	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12
Climbing perch	MODERN SPECIES	20	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193
Climbing perch	MODERN SPECIES	20	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)
Climbing perch	MODERN SPECIES	20	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287
Climbing perch	MODERN SPECIES	20	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161
Climbing perch	MODERN SPECIES	20	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)
Climbing perch	MODERN SPECIES	20	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161	ENSATEG00000022154	ENSATEG00000022145
Climbing perch	MODERN SPECIES	20	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228	ENSATEG00000022193	MTCH1 (ENSATEG00000030114)	stk35 (ENSATEG00000022165)	ENSATEG00000022161	ENSATEG00000022154
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	20	ENSATEG00000025921	ENSATEG00000028522	ENSATEG00000026692	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14
Climbing perch	MODERN SPECIES	20	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276	ENSATEG00000022270	ENSATEG00000022228
Climbing perch	MODERN SPECIES	20	ENSATEG00000026044	ENSATEG00000029776	ENSATEG00000029075	ENSATEG00000028677	ENSATEG00000026760	ENSATEG00000026525	ENSATEG00000022741	ENSATEG00000027674	ENSATEG00000026598	ENSATEG00000029076	ENSATEG00000026739	ENSATEG00000028580	ENSATEG00000022579 #22	ENSATEG00000022681 #22	ENSATEG00000022652 #22	ENSATEG00000022598 #22	ENSATEG00000022620 #22	ENSATEG00000025850 #22	ENSATEG00000027685 #22	ENSATEG00000022549 #22	ENSATEG00000022632 #22	ENSATEG00000022529 #22	ENSATEG00000029248 #22	ENSATEG00000022500 #22	ENSATEG00000022462	ENSATEG00000022440 #7	si:ch211-251b21.1 (ENSATEG00000022417) #17	ENSATEG00000022340 #14	pex10 (ENSATEG00000022313) #12	ENSATEG00000022287	ENSATEG00000022276
Siamese fighting fish	DUPLICATION
Siamese fighting fish	DUPLICATION
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)	GMEB2 (ENSBSLG00000014099)	tpk2 (ENSBSLG00000014122)
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000026553	ENSBSLG00000026552	and2 (ENSBSLG00000026550)	COPS9 (ENSBSLG00000026549)	apoda.1 (ENSBSLG00000026547)	apoda.2 (ENSBSLG00000026546)	samd7 (ENSBSLG00000026545)	sec62 (ENSBSLG00000026544)	nadkb (ENSBSLG00000026536)	gpr160 (ENSBSLG00000026533)	ENSBSLG00000026532	prkci (ENSBSLG00000026515)	ENSBSLG00000026497	ENSBSLG00000026491	sppl2 (ENSBSLG00000026467)	ENSBSLG00000026448 #22	ENSBSLG00000026446	ENSBSLG00000026445	arhgef18a (ENSBSLG00000026444)	insra (ENSBSLG00000026284)	mfsd14a2 (ENSBSLG00000026162)	ENSBSLG00000026138	loxl5b (ENSBSLG00000026129)	nmrk2 (ENSBSLG00000026127)	ATCAY (ENSBSLG00000026123)	cplx4c (ENSBSLG00000026113)	rx2 (ENSBSLG00000026109)	ENSBSLG00000026085	ENSBSLG00000026013	ENSBSLG00000025946	ap1m1 (ENSBSLG00000025820)
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)	GMEB2 (ENSBSLG00000014099)
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009215	ENSBSLG00000009219	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)	stk35 (ENSBSLG00000014048)	pdyn (ENSBSLG00000014084)
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	21	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)	ENSMAMG00000014860
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015756	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883
Zig-zag eel	MODERN SPECIES	21	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015760	ENSMAMG00000015756	emd (ENSMAMG00000028253)	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015523	rpl10 (ENSMAMG00000015455)	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)
Carangaria	ANCESTRAL SPECIES	2	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Carangaria_A	ANCESTRAL SPECIES	55																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	429																ENSLCAG00010001117 #22	ENSLCAG00010001110 #22	prkcz (ENSLCAG00010000953)	skia (ENSLCAG00010000872) #7
Barramundi perch	MODERN SPECIES	1664																ENSLCAG00010019210 #22
Barramundi perch	MODERN SPECIES	790																ENSLCAG00010009245 #22
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	797															ENSLCAG00010007730	ENSLCAG00010007732 #22
Barramundi perch	MODERN SPECIES	1666																ENSLCAG00010022944 #22
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1622																ENSLCAG00010011024 #22
Barramundi perch	MODERN SPECIES	1842																ENSLCAG00010011071 #22
Barramundi perch	MODERN SPECIES	1678																ENSLCAG00010020431 #22
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1692																ENSLCAG00010017402 #22	ENSLCAG00010017403	ENSLCAG00010017406
Barramundi perch	MODERN SPECIES	869																ENSLCAG00010000449 #22	ENSLCAG00010000453	ENSLCAG00010000463	rpl10 (ENSLCAG00010000468)
Seriola	DUPLICATION
Seriola	DUPLICATION
Seriola	ANCESTRAL SPECIES	113																ENSGT00950000183126.a.p.a.jb.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.f	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2720															ENSSLDG00000000724 #22	ENSSLDG00000000737 #22	ENSSLDG00000000769	rpl10 (ENSSLDG00000000776)	FLNA (ENSSLDG00000000850)	emd (ENSSLDG00000001470)	ENSSLDG00000001502	ENSSLDG00000001518	MRPL49 (ENSSLDG00000001537)	ENSSLDG00000001558
Yellowtail amberjack	MODERN SPECIES	2883	icmt (ENSSLDG00000016837)	rtel1 (ENSSLDG00000016644)	ndufb11 (ENSSLDG00000016591)	tbc1d25 (ENSSLDG00000016567)	ccdc22 (ENSSLDG00000016478)	slc38a5b (ENSSLDG00000016357)	slc2a1a (ENSSLDG00000016318)	mthfr (ENSSLDG00000016286)	CLCN6 (ENSSLDG00000016190)	nppal (ENSSLDG00000016150)	nppb (ENSSLDG00000016139)	nppa (ENSSLDG00000016129)	ARHGEF10L (ENSSLDG00000016035)	tnnc1b (ENSSLDG00000015992)	dedd (ENSSLDG00000015966)	ENSSLDG00000015938 #22
Greater amberjack	MODERN SPECIES	191																ENSSDUG00000013602 #22	ENSSDUG00000013621 #22	ENSSDUG00000013640	rpl10 (ENSSDUG00000013659)	FLNA (ENSSDUG00000013710)	emd (ENSSDUG00000013792)	NINJ1 (ENSSDUG00000013808)	MRPL49 (ENSSDUG00000013816)	ENSSDUG00000013818	ENSSDUG00000013831	atp2b3b (ENSSDUG00000013844)	ccnq (ENSSDUG00000013965)	cfap126 (ENSSDUG00000013970)	zgc:101663 (ENSSDUG00000013979)	ap4b1 (ENSSDUG00000013990)	sephs3 (ENSSDUG00000014003)
Seriola	ANCESTRAL SPECIES	99																ENSGT00950000183126.a.p.a.jb.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2883	ENSSLDG00000018842	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)	pdyn (ENSSLDG00000017106)
Yellowtail amberjack	MODERN SPECIES	2883	ABHD17A (ENSSLDG00000018861)	ENSSLDG00000018842	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)
Yellowtail amberjack	MODERN SPECIES	2720							ENSSLDG00000001558	MRPL49 (ENSSLDG00000001537)	ENSSLDG00000001518	ENSSLDG00000001502	emd (ENSSLDG00000001470)	FLNA (ENSSLDG00000000850)	rpl10 (ENSSLDG00000000776)	ENSSLDG00000000769	ENSSLDG00000000737 #22	ENSSLDG00000000724 #22
Greater amberjack	MODERN SPECIES	134																ENSSDUG00000002783 #22	ENSSDUG00000002761 #22	prkcz (ENSSDUG00000002703)	skia (ENSSDUG00000002658) #7	ENSSDUG00000002639	si:ch211-251b21.1 (ENSSDUG00000002623) #17	plch2a (ENSSDUG00000002588) #14	pex10 (ENSSDUG00000002561) #12	renbp (ENSSDUG00000002522)	ENSSDUG00000002508	ENSSDUG00000002491	dennd2da (ENSSDUG00000002435)	stk38a (ENSSDUG00000002369)	MTCH1 (ENSSDUG00000002338)	stk35 (ENSSDUG00000002332)	pdyn (ENSSDUG00000002320)
Seriola	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.kb #22
Greater amberjack	MODERN SPECIES	191															ENSSDUG00000013602 #22	ENSSDUG00000013621 #22	ENSSDUG00000013640	rpl10 (ENSSDUG00000013659)	FLNA (ENSSDUG00000013710)	emd (ENSSDUG00000013792)	NINJ1 (ENSSDUG00000013808)	MRPL49 (ENSSDUG00000013816)	ENSSDUG00000013818	ENSSDUG00000013831	atp2b3b (ENSSDUG00000013844)	ccnq (ENSSDUG00000013965)	cfap126 (ENSSDUG00000013970)	zgc:101663 (ENSSDUG00000013979)	ap4b1 (ENSSDUG00000013990)	sephs3 (ENSSDUG00000014003)	ikbkg (ENSSDUG00000014012)
Pleuronectoidei	ANCESTRAL SPECIES	41	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT01060000248869	ENSGT00940000178462	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	1	sephs3 (ENSCSEG00000003334)	ap4b1 (ENSCSEG00000003328)	zgc:101663 (ENSCSEG00000003323)	cfap126 (ENSCSEG00000003322)	ccnq (ENSCSEG00000003319)	atp2b3b (ENSCSEG00000003290)	rpl10 (ENSCSEG00000003267)	ENSCSEG00000003231	las1l (ENSCSEG00000003223)	ENSCSEG00000003220	FLNA (ENSCSEG00000003135)	ENSCSEG00000003121	ENSCSEG00000003120	MRPL49 (ENSCSEG00000003115)	ENSCSEG00000003106	ENSCSEG00000003100 #22	ENSCSEG00000003071 #22	prkcz (ENSCSEG00000003042)	skia (ENSCSEG00000003029) #7	SNPH (ENSCSEG00000003019)	sdcbp2 (ENSCSEG00000002995)	fkbp1ab (ENSCSEG00000002991)	nsfl1c (ENSCSEG00000002978)	ENSCSEG00000002977	cox4i2 (ENSCSEG00000002973)	bcl2l1 (ENSCSEG00000002958)	ARFGEF2 (ENSCSEG00000002931)	pard6b (ENSCSEG00000002930)	ENSCSEG00000002928	adnpb (ENSCSEG00000002926)	dpm1 (ENSCSEG00000002918)
Tongue sole	MODERN SPECIES	1	ap4b1 (ENSCSEG00000003328)	zgc:101663 (ENSCSEG00000003323)	cfap126 (ENSCSEG00000003322)	ccnq (ENSCSEG00000003319)	atp2b3b (ENSCSEG00000003290)	rpl10 (ENSCSEG00000003267)	ENSCSEG00000003231	las1l (ENSCSEG00000003223)	ENSCSEG00000003220	FLNA (ENSCSEG00000003135)	ENSCSEG00000003121	ENSCSEG00000003120	MRPL49 (ENSCSEG00000003115)	ENSCSEG00000003106	ENSCSEG00000003100 #22	ENSCSEG00000003071 #22	prkcz (ENSCSEG00000003042)	skia (ENSCSEG00000003029) #7	SNPH (ENSCSEG00000003019)	sdcbp2 (ENSCSEG00000002995)	fkbp1ab (ENSCSEG00000002991)	nsfl1c (ENSCSEG00000002978)	ENSCSEG00000002977	cox4i2 (ENSCSEG00000002973)	bcl2l1 (ENSCSEG00000002958)	ARFGEF2 (ENSCSEG00000002931)	pard6b (ENSCSEG00000002930)	ENSCSEG00000002928	adnpb (ENSCSEG00000002926)	dpm1 (ENSCSEG00000002918)	ENSCSEG00000002893
Tongue sole	MODERN SPECIES	7	si:dkey-69o16.5 (ENSCSEG00000020784)	ENSCSEG00000020782	ENSCSEG00000020780	ENSCSEG00000020778	ENSCSEG00000020775	ENSCSEG00000020771	ENSCSEG00000020764	tmem237a (ENSCSEG00000020761)	cnot11 (ENSCSEG00000020759)	lcp1 (ENSCSEG00000020752)	ENSCSEG00000020748	itm2bb (ENSCSEG00000020746)	med4 (ENSCSEG00000020743)	sucla2 (ENSCSEG00000020741)	ENSCSEG00000020730	ENSCSEG00000020724 #22	ENSCSEG00000020717	ENSCSEG00000020711	slc37a1 (ENSCSEG00000020705)	PDE9A (ENSCSEG00000020701)	ENSCSEG00000020696	ENSCSEG00000020694	ENSCSEG00000020693	ENSCSEG00000020692	ifngr2 (ENSCSEG00000020690)	ENSCSEG00000020689	ENSCSEG00000020687	ENSCSEG00000020683	ENSCSEG00000020682	ENSCSEG00000020681	pknox1.1 (ENSCSEG00000020679)
Tongue sole	MODERN SPECIES		dachb (ENSCSEG00000005103)	ENSCSEG00000005073	stk26 (ENSCSEG00000005056)	zgc:77880 (ENSCSEG00000005054)	ENSCSEG00000005048	pip4p1b (ENSCSEG00000005042)	ENSCSEG00000005021	ENSCSEG00000005015	dysf (ENSCSEG00000004989)	cyp26b1 (ENSCSEG00000004973)	camk2d1 (ENSCSEG00000004948)	rpl17 (ENSCSEG00000004760)	ARSJ (ENSCSEG00000004731)	mad2l1 (ENSCSEG00000004726)	pde5ab (ENSCSEG00000004689)	ENSCSEG00000004679 #22	ENSCSEG00000004675	zcchc4 (ENSCSEG00000004671)	ABLIM2 (ENSCSEG00000004654)	AFAP1 (ENSCSEG00000004634)	STIM2 (ENSCSEG00000004617)	tbc1d19 (ENSCSEG00000004592)	CCKAR (ENSCSEG00000004584)	RBPJ (ENSCSEG00000004581)	smim20 (ENSCSEG00000004579)	ENSCSEG00000004575	ENSCSEG00000004573	sat2a.2 (ENSCSEG00000004567)	tnfsf12 (ENSCSEG00000004560)	ENSCSEG00000004557	CHD3 (ENSCSEG00000004489)
Tongue sole	MODERN SPECIES	10	ftr83 (ENSCSEG00000011391)	ruvbl2 (ENSCSEG00000011364)	SPNS2 (ENSCSEG00000011335)	ube2g1a (ENSCSEG00000011314)	ankfy1 (ENSCSEG00000011282)	cyb5d2 (ENSCSEG00000011274)	ZZEF1 (ENSCSEG00000011204)	ATP2A3 (ENSCSEG00000011132)	camkk1a (ENSCSEG00000011071)	p2rx1 (ENSCSEG00000011044)	dhx33 (ENSCSEG00000011017)	c1qbp (ENSCSEG00000011004)	ENSCSEG00000010991	SRRM3 (ENSCSEG00000010978)	hspb1 (ENSCSEG00000010973)	ENSCSEG00000010966 #22	YWHAG (ENSCSEG00000010962)	ENSCSEG00000010953	ENSCSEG00000010919	supt4h1 (ENSCSEG00000010897)	ENSCSEG00000010890	ENSCSEG00000010885	ENSCSEG00000010880	hpda (ENSCSEG00000010853)	MTMR4 (ENSCSEG00000010749)	ca4a (ENSCSEG00000010729)	tmem132e (ENSCSEG00000010685)	dtx2 (ENSCSEG00000010666)	GTF2IRD1 (ENSCSEG00000010605)	CLIP2 (ENSCSEG00000010519)	cldn2 (ENSCSEG00000010506)
Turbot	MODERN SPECIES	2	ENSSMAG00000001521	atp2b3b (ENSSMAG00000001353)	ENSSMAG00000001328	cfap126 (ENSSMAG00000001320)	ENSSMAG00000001296	ENSSMAG00000001287	ENSSMAG00000001258	ENSSMAG00000001223	tmed4 (ENSSMAG00000001198)	plpbp (ENSSMAG00000001176)	snrpg (ENSSMAG00000034866)	ENSSMAG00000001166	ENSSMAG00000001108	ENSSMAG00000001033	ENSSMAG00000000997	ENSSMAG00000000746 #22	kif3b (ENSSMAG00000000775)	pofut1 (ENSSMAG00000000831)	plagl2 (ENSSMAG00000036259)	tm9sf4 (ENSSMAG00000000839)	HCK (ENSSMAG00000000875)	ENSSMAG00000000889	gata5 (ENSSMAG00000000905)	ENSSMAG00000023086	ENSSMAG00000000977	SLCO4A1 (ENSSMAG00000011046)	ENSSMAG00000011080	ENSSMAG00000011091	ENSSMAG00000011105	ENSSMAG00000011129	ENSSMAG00000033237
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	64																ENSHCOG00000011050 #22
Tiger tail seahorse	MODERN SPECIES	404	ap4b1 (ENSHCOG00000014600)	zgc:101663 (ENSHCOG00000014574)	cfap126 (ENSHCOG00000014569)	ccnq (ENSHCOG00000014564)	atp2b3b (ENSHCOG00000014556)	ENSHCOG00000014516	ENSHCOG00000014504	ENSHCOG00000014496	NINJ1 (ENSHCOG00000014486)	emd (ENSHCOG00000014478)	ENSHCOG00000014471	ENSHCOG00000014442	rpl10 (ENSHCOG00000014435)	ENSHCOG00000014425	ENSHCOG00000014408	ENSHCOG00000014403 #22	prkcz (ENSHCOG00000014393)	skia (ENSHCOG00000014360) #7	skia (ENSHCOG00000014355) #7	si:ch211-251b21.1 (ENSHCOG00000014345) #17	PLCH2 (ENSHCOG00000014342) #14	pex10 (ENSHCOG00000014307) #12	renbp (ENSHCOG00000014303)	ENSHCOG00000014272	dennd2da (ENSHCOG00000014260)	stk38a (ENSHCOG00000014243)	MTCH1 (ENSHCOG00000000398)	stk35 (ENSHCOG00000000396)	pdyn (ENSHCOG00000014163)	GMEB2 (ENSHCOG00000014151)	ENSHCOG00000014137
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	21	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)	icmt (ENSMMDG00005000845)
Pinecone sodierfish	MODERN SPECIES	21	b3gnt7l (ENSMMDG00005024307)	ENSMMDG00005024309	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)
Pinecone sodierfish	MODERN SPECIES	21	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)
Pinecone sodierfish	MODERN SPECIES	21	CEP104 (ENSMMDG00005024303)	b3gnt7l (ENSMMDG00005024307)	ENSMMDG00005024309	dffb (ENSMMDG00005000242)	NPHP4 (ENSMMDG00005000283)	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		fance (ENSGMOG00000008217)	rpl10a (ENSGMOG00000008210)	ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659
Cod	MODERN SPECIES		ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044	ENSGMOG00000027969	ENSGMOG00000005869
Cod	MODERN SPECIES		ENSGMOG00000032961	ENSGMOG00000006304	ENSGMOG00000014418	ENSGMOG00000031361	ttll9 (ENSGMOG00000014393)	ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044	ENSGMOG00000027969
Cod	MODERN SPECIES		ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059	ENSGMOG00000006044
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000006488	ENSGMOG00000006453	vwa1 (ENSGMOG00000006448)	ENSGMOG00000012759	ENSGMOG00000037186	ENSGMOG00000012747	ENSGMOG00000012741	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000022869	ENSGMOG00000012722	DENND2C (ENSGMOG00000012718)	ENSGMOG00000025412	ENSGMOG00000027008 #22	ENSGMOG00000036200 #22	ENSGMOG00000026195 #22	ENSGMOG00000028189 #22	ENSGMOG00000023095	ENSGMOG00000009770	ENSGMOG00000009725	ENSGMOG00000010358	ENSGMOG00000010338	ENSGMOG00000029644	ENSGMOG00000010329	ENSGMOG00000010281	ENSGMOG00000025024	ENSGMOG00000010260	ENSGMOG00000010255	UBA3 (ENSGMOG00000010238)	ARL6IP5 (ENSGMOG00000010233)	LMOD3 (ENSGMOG00000028614)	FRMD4B (ENSGMOG00000010202)
Cod	MODERN SPECIES		UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246	ENSGMOG00000006540	ENSGMOG00000006567
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518	ENSGMOG00000003528
Cod	MODERN SPECIES		LMOD3 (ENSGMOG00000028614)	ARL6IP5 (ENSGMOG00000010233)	UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246
Cod	MODERN SPECIES		phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105	ENSGMOG00000006059
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116
Cod	MODERN SPECIES		ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136	ENSGMOG00000006116	ENSGMOG00000006105
Cod	MODERN SPECIES		ttll9 (ENSGMOG00000014393)	ENSGMOG00000024863	ppp1r3da (ENSGMOG00000014373)	phactr3a (ENSGMOG00000014296)	ENSGMOG00000008085	ENSGMOG00000008083	ENSGMOG00000030115	ENSGMOG00000029446	ENSGMOG00000025537	ENSGMOG00000009365	ENSGMOG00000003650	ENSGMOG00000033857 #22	ENSGMOG00000023261	ENSGMOG00000028709	ENSGMOG00000035128	ENSGMOG00000026919 #22	ENSGMOG00000031116 #22	ENSGMOG00000030452 #22	ENSGMOG00000003600 #22	ENSGMOG00000003574 #22	ENSGMOG00000028091 #22	ENSGMOG00000035097 #22	ENSGMOG00000003553	ENSGMOG00000003541	ENSGMOG00000003528	ENSGMOG00000003518	ENSGMOG00000031659	ENSGMOG00000003501	ENSGMOG00000027849	ENSGMOG00000006147	ENSGMOG00000006136
Cod	MODERN SPECIES		rpl10a (ENSGMOG00000008210)	ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518
Cod	DUPLICATION
Cod	MODERN SPECIES	147										ENSGMOG00000029134	ENSGMOG00000035578	ENSGMOG00000036381	ENSGMOG00000033025	ENSGMOG00000032683	ENSGMOG00000022886	ENSGMOG00000024435 #22
Cod	MODERN SPECIES		ARL6IP5 (ENSGMOG00000010233)	UBA3 (ENSGMOG00000010238)	ENSGMOG00000010255	ENSGMOG00000010260	ENSGMOG00000025024	ENSGMOG00000010281	ENSGMOG00000010329	ENSGMOG00000029644	ENSGMOG00000010338	ENSGMOG00000010358	ENSGMOG00000009725	ENSGMOG00000009770	ENSGMOG00000023095	ENSGMOG00000028189 #22	ENSGMOG00000026195 #22	ENSGMOG00000036200 #22	ENSGMOG00000027008 #22	ENSGMOG00000025412	DENND2C (ENSGMOG00000012718)	ENSGMOG00000012722	ENSGMOG00000022869	CSDE1 (ENSGMOG00000012731)	ENSGMOG00000012741	ENSGMOG00000012747	ENSGMOG00000037186	ENSGMOG00000012759	vwa1 (ENSGMOG00000006448)	ENSGMOG00000006453	ENSGMOG00000006488	ENSGMOG00000034246	ENSGMOG00000006540
Cod	MODERN SPECIES	18	ENSGMOG00000013008	ENSGMOG00000032728	ENSGMOG00000030150	ENSGMOG00000014304	ENSGMOG00000001292	ENSGMOG00000020465	ENSGMOG00000034444	mrps26 (ENSGMOG00000029210)	loxl3b (ENSGMOG00000015943)	pank2 (ENSGMOG00000015936)	ENSGMOG00000015933	ENSGMOG00000025282	sfxn5a (ENSGMOG00000015884)	emx1 (ENSGMOG00000015872)	noto (ENSGMOG00000015860)	ENSGMOG00000029495 #22	ENSGMOG00000025271	ENSGMOG00000000236	ap5s1 (ENSGMOG00000030914)	ENSGMOG00000005213	ENSGMOG00000005262	rpia (ENSGMOG00000005294)	ENSGMOG00000022287	ENSGMOG00000024688	dnaaf9 (ENSGMOG00000006306)	ENSGMOG00000006359	ENSGMOG00000027099	SGPP1 (ENSGMOG00000030796)	ENSGMOG00000028601	wdr89 (ENSGMOG00000022613)	ppp2r5eb (ENSGMOG00000009392)
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000032675	ENSGMOG00000033031	dffb (ENSGMOG00000013261)	ENSGMOG00000022175	ENSGMOG00000015826	ENSGMOG00000025158	ENSGMOG00000026474	ENSGMOG00000022275	ENSGMOG00000003596	ENSGMOG00000018785	NADK (ENSGMOG00000008413)	ENSGMOG00000036919	ENSGMOG00000008410	ENSGMOG00000008407	ENSGMOG00000008405 #22	ENSGMOG00000008404 #22	ENSGMOG00000015911	ENSGMOG00000026487	nr1h5 (ENSGMOG00000015966)	slc66a1 (ENSGMOG00000015992)	trim33 (ENSGMOG00000016005)	bcas2 (ENSGMOG00000014357)	krt8 (ENSGMOG00000014429)	krt18a.1 (ENSGMOG00000000117)	krt18a.2 (ENSGMOG00000028474)	ENSGMOG00000004659	ENSGMOG00000004729	ENSGMOG00000004749	sars1 (ENSGMOG00000004761)	ENSGMOG00000028311	fam50a (ENSGMOG00000004783)
Cod	MODERN SPECIES		ENSGMOG00000022392	ENSGMOG00000032675	ENSGMOG00000033031	dffb (ENSGMOG00000013261)	ENSGMOG00000022175	ENSGMOG00000015826	ENSGMOG00000025158	ENSGMOG00000026474	ENSGMOG00000022275	ENSGMOG00000003596	ENSGMOG00000018785	NADK (ENSGMOG00000008413)	ENSGMOG00000036919	ENSGMOG00000008410	ENSGMOG00000008407	ENSGMOG00000008405 #22	ENSGMOG00000008404 #22	ENSGMOG00000015911	ENSGMOG00000026487	nr1h5 (ENSGMOG00000015966)	slc66a1 (ENSGMOG00000015992)	trim33 (ENSGMOG00000016005)	bcas2 (ENSGMOG00000014357)	krt8 (ENSGMOG00000014429)	krt18a.1 (ENSGMOG00000000117)	krt18a.2 (ENSGMOG00000028474)	ENSGMOG00000004659	ENSGMOG00000004729	ENSGMOG00000004749	sars1 (ENSGMOG00000004761)	ENSGMOG00000028311
Protacanthopterygii	ANCESTRAL SPECIES	186								ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000156186.k	ENSGT00940000153792.B.p	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.a #22
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000002738	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166
Oncorhynchus_a	ANCESTRAL SPECIES	685																ENSGT00950000183126.a.p.a.tb.a.a.a #22	ENSGT00950000183126.a.p.b.k #22
Coho salmon	MODERN SPECIES	8	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759	MYT1 (ENSOKIG00005007791)	TBC1D22B (ENSOKIG00005007941)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.a.a.b #22
Coho salmon	MODERN SPECIES	8	LHFPL4 (ENSOKIG00005004913)	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a	ENSGT00390000004928.z
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	102					ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Chinook salmon	MODERN SPECIES	102							ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1362																ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.ub.b #22
Salmoninae_a	ANCESTRAL SPECIES	266																ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000156364.a.a.c	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554
Huchen	MODERN SPECIES	1064					ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae	ANCESTRAL SPECIES	408	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.tb.b.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
River trout	DUPLICATION
River trout	DUPLICATION
River trout	MODERN SPECIES	20	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)
River trout	MODERN SPECIES	20	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)
River trout	MODERN SPECIES	20	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)	ENSSTUG00000016414
Huchen	MODERN SPECIES	1064			ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	408	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f
Huchen	MODERN SPECIES	1064						skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b	ENSGT00940000153110.B.e.a
River trout	MODERN SPECIES	20	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020535	ENSSTUG00000021778
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073437	ENSSSAG00000114644	ENSSSAG00000109446	ENSSSAG00000073509	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b
Chinook salmon	MODERN SPECIES	102							ENSOTSG00005038811	prkcz (ENSOTSG00005038810)	ENSOTSG00005038808 #22	ENSOTSG00005038801 #22	ENSOTSG00005038760 #22	ENSOTSG00005038758	ENSOTSG00005038753 #22	ENSOTSG00005038749 #22	ENSOTSG00005038746 #22	ENSOTSG00005038744 #22	sars1 (ENSOTSG00005038578)	ENSOTSG00005038574	tmem106c (ENSOTSG00005038572)	ENSOTSG00005037786
Coho salmon	MODERN SPECIES	8	plagl2 (ENSOKIG00005007631)	tm9sf4 (ENSOKIG00005007408)	ENSOKIG00005007378	ENSOKIG00005007372	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007345	PLCH2 (ENSOKIG00005006908) #14	si:ch211-251b21.1 (ENSOKIG00005006806) #17	SKI (ENSOKIG00005006789) #7	PRKCZ (ENSOKIG00005006443)	ENSOKIG00005006374 #22	ENSOKIG00005006279 #22	ENSOKIG00005006238 #22	ENSOKIG00005006206	ENSOKIG00005006107 #22	ENSOKIG00005006062 #22	sars1 (ENSOKIG00005006030)	tmem106c (ENSOKIG00005006005)	ENSOKIG00005005883	ENSOKIG00005005837	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005680	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005052	ENSOKIG00005004949	ENSOKIG00005004943	ENSOKIG00005004925	LHFPL4 (ENSOKIG00005004913)	CPNE9 (ENSOKIG00005004627)	klf15 (ENSOKIG00005004576)	ENSOKIG00005004548
Salmoninae	ANCESTRAL SPECIES	2186															ENSGT00940000154356.D.a.b.g	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Atlantic salmon	MODERN SPECIES	6	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774
River trout	MODERN SPECIES	20	ENSSTUG00000020393	ENSSTUG00000019840	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22
Coho salmon	MODERN SPECIES	8	klf15 (ENSOKIG00005004576)	CPNE9 (ENSOKIG00005004627)	LHFPL4 (ENSOKIG00005004913)	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)
Huchen	MODERN SPECIES	1064									skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae	ANCESTRAL SPECIES	2185																ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Huchen	MODERN SPECIES	1064								skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae_a	ANCESTRAL SPECIES	266													ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b
River trout	MODERN SPECIES	20	plch2a (ENSSTUG00000017430) #14	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020535
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000105477 ##29	ENSSSAG00000061746 #22	ENSSSAG00000120187 #22	ENSSSAG00000120624 #22	ENSSSAG00000061491 #22	ENSSSAG00000085590 #22	ENSSSAG00000061788 #22	ENSSSAG00000074966 #22	ENSSSAG00000082322 #22	ENSSSAG00000108024 #22	ENSSSAG00000061624 #22	ENSSSAG00000061684 #22	ENSSSAG00000061429 #22	ENSSSAG00000074962 #22	ENSSSAG00000074972 #22	ENSSSAG00000086609 #22	ENSSSAG00000099494 #22	ENSSSAG00000074952 #22	ENSSSAG00000074926	ENSSSAG00000109676	ENSSSAG00000074909	ENSSSAG00000074344	eif4ba (ENSSSAG00000074310)	krt18a.2 (ENSSSAG00000074300)	krt18a.1 (ENSSSAG00000074296)	k2c8 (ENSSSAG00000074245)	ENSSSAG00000120869	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000073571	ENSSSAG00000073509	ENSSSAG00000109446
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000156364.a.a.c	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a	ENSGT00990000203541.a.b.a.b.b
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	30	cyp2k5 (ENSOMYG00000002099)	ENSOMYG00000055096	ENSOMYG00000058331	ENSOMYG00000002157	ENSOMYG00000002738	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000053638	tm9sf4 (ENSOMYG00000007426)	pex10 (ENSOMYG00000007764) #12	ENSOMYG00000007909 #14	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000057974	ENSOMYG00000004448 #7	ENSOMYG00000004359	ENSOMYG00000004196 #22	ENSOMYG00000004142 #22	ENSOMYG00000060044 #22	ENSOMYG00000053062	ENSOMYG00000074064	ENSOMYG00000018945	ENSOMYG00000003739 #22	ENSOMYG00000059123 #22	ENSOMYG00000003341	ENSOMYG00000003246	ENSOMYG00000003233	ENSOMYG00000074098	ENSOMYG00000003150	krt18a.2 (ENSOMYG00000003124)	krt18a.1 (ENSOMYG00000003109)	krt8 (ENSOMYG00000057091)	zgc:171775 (ENSOMYG00000003062)	ENSOMYG00000002738	ENSOMYG00000002157	ENSOMYG00000058331	ENSOMYG00000055096	cyp2k5 (ENSOMYG00000002099)	ENSOMYG00000077356
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.e	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000162649.e.a.b.a
Chinook salmon	MODERN SPECIES	102								ENSOTSG00005038811	prkcz (ENSOTSG00005038810)	ENSOTSG00005038808 #22	ENSOTSG00005038801 #22	ENSOTSG00005038760 #22	ENSOTSG00005038758	ENSOTSG00005038753 #22	ENSOTSG00005038749 #22	ENSOTSG00005038746 #22	ENSOTSG00005038744 #22	sars1 (ENSOTSG00005038578)	ENSOTSG00005038574	tmem106c (ENSOTSG00005038572)	ENSOTSG00005037786
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Salmo	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.a.a.b #22
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14
Atlantic salmon	MODERN SPECIES	6	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7
Oncorhynchus	ANCESTRAL SPECIES	534																ENSGT00950000183126.a.p.a.ub.a.a.a.b #22	ENSGT00950000183126.a.p.b.k #22
Rainbow trout	MODERN SPECIES	30	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166	ENSOMYG00000074161	ENSOMYG00000006241
Salmoninae	ANCESTRAL SPECIES	2185															ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES	266												ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a	ENSGT00940000162649.e.a.b	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000159659.d.a.b
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000061746 #22	ENSSSAG00000120187 #22	ENSSSAG00000120624 #22	ENSSSAG00000061491 #22	ENSSSAG00000085590 #22	ENSSSAG00000061788 #22	ENSSSAG00000074966 #22	ENSSSAG00000082322 #22	ENSSSAG00000108024 #22	ENSSSAG00000061624 #22	ENSSSAG00000061684 #22	ENSSSAG00000061429 #22	ENSSSAG00000074962 #22	ENSSSAG00000074972 #22	ENSSSAG00000086609 #22	ENSSSAG00000099494 #22	ENSSSAG00000074952 #22	ENSSSAG00000074926	ENSSSAG00000109676	ENSSSAG00000074909	ENSSSAG00000074344	eif4ba (ENSSSAG00000074310)	krt18a.2 (ENSSSAG00000074300)	krt18a.1 (ENSSSAG00000074296)	k2c8 (ENSSSAG00000074245)	ENSSSAG00000120869	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000073571	ENSSSAG00000073509	ENSSSAG00000109446	ENSSSAG00000114644
Huchen	MODERN SPECIES	1064							skia (ENSHHUG00000002352) #7	ENSHHUG00000002340 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002207 #22	ENSHHUG00000002099 #22	ENSHHUG00000002089	ENSHHUG00000002070	ENSHHUG00000002040 #22	ENSHHUG00000002022 #22	ENSHHUG00000001969 #22	ENSHHUG00000001859 #22	sars1 (ENSHHUG00000001795)	ENSHHUG00000001763	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001632
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.b #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00990000203541.a.b.a.b.b	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Salmo	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.a.ub.a.b #22
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073509	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531
Atlantic salmon	MODERN SPECIES	6	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Chinook salmon	MODERN SPECIES	102									ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Salmoninae	ANCESTRAL SPECIES	1362																ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22
Huchen	MODERN SPECIES	1064						ENSHHUG00000001632	tmem106c (ENSHHUG00000001721)	ENSHHUG00000001763	sars1 (ENSHHUG00000001795)	ENSHHUG00000001859 #22	ENSHHUG00000001969 #22	ENSHHUG00000002022 #22	ENSHHUG00000002040 #22	ENSHHUG00000002070	ENSHHUG00000002089	ENSHHUG00000002099 #22	ENSHHUG00000002207 #22	prkcz (ENSHHUG00000002214)	ENSHHUG00000002340 #22	skia (ENSHHUG00000002352) #7
Salmoninae_a	ANCESTRAL SPECIES	266														ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h
River trout	MODERN SPECIES	20	LHFPL4 (ENSSTUG00000020494)	ENSSTUG00000020433	ENSSTUG00000020393	ENSSTUG00000019840	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000162649.e.a.b.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c
Chinook salmon	MODERN SPECIES	102										ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	11	ENSELUG00000025389	ENSELUG00000012148	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12
Northern pike	MODERN SPECIES	11	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)
Northern pike	MODERN SPECIES	11	ENSELUG00000012148	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457
Northern pike	MODERN SPECIES	11	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)
Northern pike	MODERN SPECIES	11	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)
Osteoglossiformes	ANCESTRAL SPECIES	727																ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030335	ENSSFOG00015021340	ENSSFOG00015029569	ENSSFOG00015032610	ENSSFOG00015028826	ENSSFOG00015023512	ENSSFOG00015030218	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535	ENSSFOG00015031739
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015021340	ENSSFOG00015029569	ENSSFOG00015032610	ENSSFOG00015028826	ENSSFOG00015023512	ENSSFOG00015030218	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683	ENSSFOG00015031584
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22
Asian bonytongue	MODERN SPECIES	11	plod1a (ENSSFOG00015010374)	si:dkeyp-104h9.5 (ENSSFOG00015027990)	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984
Asian bonytongue	MODERN SPECIES	11	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22
Asian bonytongue	MODERN SPECIES	11	si:dkeyp-104h9.5 (ENSSFOG00015027990)	nppal (ENSSFOG00015010310)	ENSSFOG00015010266	ENSSFOG00015010216	CLCN6 (ENSSFOG00015010129)	mthfr (ENSSFOG00015010018)	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029265	ENSSFOG00015029436	ENSSFOG00015025968	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)
Asian bonytongue	MODERN SPECIES	11	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739	ENSSFOG00015023535	ENSSFOG00015027077	ENSSFOG00015028546	ENSSFOG00015011544	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015010095	pex10 (ENSSFOG00015009982) #12	plch2a (ENSSFOG00015009883) #14	ENSSFOG00015009822 #17	ENSSFOG00015009803 #10	skia (ENSSFOG00015009774) #7	prkcz (ENSSFOG00015009687)	ENSSFOG00015028083	ENSSFOG00015029816 #22	ENSSFOG00015031314 #22	ENSSFOG00015003094 #22	ENSSFOG00015031310 #22	ENSSFOG00015030174 #22	ENSSFOG00015029663 #22	ENSSFOG00015000872 #22	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015025968	ENSSFOG00015000208	ENSSFOG00015026400	ENSSFOG00015026948	ENSSFOG00015007420	ENSSFOG00015031584	ENSSFOG00015030683	ENSSFOG00015028686	ENSSFOG00015000103	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015030214	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10	ENSSFOG00015009822 #17
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979	ENSSFOG00015024991	ENSSFOG00015031901	ENSSFOG00015031739
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029004	ENSSFOG00015032331	ENSSFOG00015028593	ENSSFOG00015023334	ENSSFOG00015000357 #22	ENSSFOG00015027581 #22	ENSSFOG00015028361 #22	ENSSFOG00015027206 #22	ENSSFOG00015030037 #22	ENSSFOG00015000470 #22	ENSSFOG00015030876 #22	ENSSFOG00015000621 #22	ENSSFOG00015031437 #22	ENSSFOG00015024972 #22	ENSSFOG00015000555 #22	ENSSFOG00015000660 #22	ENSSFOG00015000710 #22	ENSSFOG00015031087 #22	ENSSFOG00015000772 #22	lrrc47 (ENSSFOG00015011658)	mad2l2 (ENSSFOG00015011628)	ENSSFOG00015030218	ENSSFOG00015023512	ENSSFOG00015028826	ENSSFOG00015032610	ENSSFOG00015029569	ENSSFOG00015021340	ENSSFOG00015030335	ENSSFOG00015030654	ENSSFOG00015024723	ENSSFOG00015032979
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	735													PLCD3 (ENSPKIG00000003226)	acbd4 (ENSPKIG00000003043)	hexim1 (ENSPKIG00000002959)	ENSPKIG00000002939 #22	ENSPKIG00000002916 #22
P. kingsleyae	MODERN SPECIES	3	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	37																ENSPKIG00000014581 #22	ENSPKIG00000014549 #22	ENSPKIG00000014478 #22	prkcz (ENSPKIG00000014407)	skia (ENSPKIG00000014364) #7	ENSPKIG00000014336 #17	ENSPKIG00000014315	pex10 (ENSPKIG00000014293) #12	mthfr (ENSPKIG00000014252)	CLCN6 (ENSPKIG00000014156)	ENSPKIG00000014121	ENSPKIG00000014100	nppal (ENSPKIG00000014077)	ENSPKIG00000014051	si:dkeyp-104h9.5 (ENSPKIG00000014031)	plod1a (ENSPKIG00000013959)
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	3	ENSPKIG00000013207	rhoab (ENSPKIG00000013242)	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	1197																ENSPKIG00000017116 #22
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	3	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
P. kingsleyae	MODERN SPECIES	37	ENSPKIG00000013839	mfn2 (ENSPKIG00000013870)	plod1a (ENSPKIG00000013959)	si:dkeyp-104h9.5 (ENSPKIG00000014031)	ENSPKIG00000014051	nppal (ENSPKIG00000014077)	ENSPKIG00000014100	ENSPKIG00000014121	CLCN6 (ENSPKIG00000014156)	mthfr (ENSPKIG00000014252)	pex10 (ENSPKIG00000014293) #12	ENSPKIG00000014315	ENSPKIG00000014336 #17	skia (ENSPKIG00000014364) #7	prkcz (ENSPKIG00000014407)	ENSPKIG00000014478 #22	ENSPKIG00000014549 #22	ENSPKIG00000014581 #22
P. kingsleyae	MODERN SPECIES	3	rhoab (ENSPKIG00000013242)	sema3h (ENSPKIG00000013268)	borcs6 (ENSPKIG00000013322)	si:dkey-72l14.3 (ENSPKIG00000013498)	xpc (ENSPKIG00000013720)	arih2 (ENSPKIG00000013761)	impdh2 (ENSPKIG00000013837)	dalrd3 (ENSPKIG00000013894)	CELSR3 (ENSPKIG00000013930)	wdr6 (ENSPKIG00000013975)	SLC26A6 (ENSPKIG00000014007)	mgll (ENSPKIG00000014070)	prkar2aa (ENSPKIG00000014106)	ENSPKIG00000014141	ENSPKIG00000014158 #22	ENSPKIG00000014194 #22	ENSPKIG00000014249 #22	ENSPKIG00000014277	ENSPKIG00000014309 #22
Spotted gar	MODERN SPECIES	664	CALML6 (ENSLOCG00000006125)	TMEM52 (ENSLOCG00000006109)	CFAP74 (ENSLOCG00000006094)	GABRD (ENSLOCG00000006079)	ENSLOCG00000006064	ENSLOCG00000006048	ENSLOCG00000006021	NPHP4 (ENSLOCG00000005969)	dffb (ENSLOCG00000005950)	b3gnt7l (ENSLOCG00000018085)	CEP104 (ENSLOCG00000005920)	lrrc47 (ENSLOCG00000005902)	SMIM1 (ENSLOCG00000005888)	mad2l2 (ENSLOCG00000005872)	ENSLOCG00000005857	zgc:153631 (ENSLOCG00000005841) #22	ENSLOCG00000005819 #22	prkcz (ENSLOCG00000005744)	skia (ENSLOCG00000005728) #7	MORN1 (ENSLOCG00000005712) #10	si:ch211-251b21.1 (ENSLOCG00000005680) #17	plch2a (ENSLOCG00000005648) #14	pex10 (ENSLOCG00000005635) #12	mthfr (ENSLOCG00000005606)	CLCN6 (ENSLOCG00000005577)	nppb (ENSLOCG00000005558)	ENSLOCG00000005537	nppal (ENSLOCG00000005514)	ENSLOCG00000005508	si:dkeyp-104h9.5 (ENSLOCG00000005478)	plod1a (ENSLOCG00000005408)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Osteoglossocephalai	ANCESTRAL SPECIES	841															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Clupeocephala	ANCESTRAL SPECIES	114	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284
Otomorpha	ANCESTRAL SPECIES	198	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Clupeiformes	ANCESTRAL SPECIES	118	ENSGT00390000016940.c.a.a	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.d #22	ENSGT00950000183126.a.p.a.c #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	DUSP7 (ENSCHAG00000019003)	atp6ap1a (ENSCHAG00000018899)	tafazzin (ENSCHAG00000018782)	ENSCHAG00000018525	GDI1 (ENSCHAG00000018356)	ITIH6 (ENSCHAG00000018239)	ndnl2 (ENSCHAG00000018210)	PFKFB1 (ENSCHAG00000016115)	smc1al (ENSCHAG00000012525)	ENSCHAG00000012432	ENSCHAG00000012425 #22	ENSCHAG00000011923	ENSCHAG00000011896 #22	ENSCHAG00000011832 #22	ENSCHAG00000011823	ENSCHAG00000011797 #22	ENSCHAG00000011783 #22	ENSCHAG00000011775 #22	ENSCHAG00000011764 #22	ENSCHAG00000011717 #22	ENSCHAG00000011667 #22	ENSCHAG00000011645 #22	ENSCHAG00000011614 #22	ENSCHAG00000011602 #22	ENSCHAG00000011508 #22	ENSCHAG00000011486 #22	ENSCHAG00000011400 #22	ENSCHAG00000011392	ENSCHAG00000011375 #22	ENSCHAG00000011355 #22	ENSCHAG00000011341
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000011127	ENSCHAG00000011147 #22	ENSCHAG00000011178 #22	ENSCHAG00000011237	ENSCHAG00000011262 #22	ENSCHAG00000011290 #22	ENSCHAG00000011312 #22	ENSCHAG00000011341	ENSCHAG00000011355 #22	ENSCHAG00000011375 #22	ENSCHAG00000011392	ENSCHAG00000011400 #22	ENSCHAG00000011486 #22	ENSCHAG00000011508 #22	ENSCHAG00000011602 #22	ENSCHAG00000011614 #22	ENSCHAG00000011645 #22	ENSCHAG00000011667 #22	ENSCHAG00000011717 #22	ENSCHAG00000011764 #22	ENSCHAG00000011775 #22	ENSCHAG00000011783 #22	ENSCHAG00000011797 #22	ENSCHAG00000011823	ENSCHAG00000011832 #22	ENSCHAG00000011896 #22	ENSCHAG00000011923	ENSCHAG00000012425 #22	ENSCHAG00000012432	smc1al (ENSCHAG00000012525)	PFKFB1 (ENSCHAG00000016115)
Atlantic herring	MODERN SPECIES	20	wrap73 (ENSCHAG00000022313)	tp73 (ENSCHAG00000022349)	rer1 (ENSCHAG00000022408) #11	ENSCHAG00000022436	ENSCHAG00000022683	ENSCHAG00000022907	ENSCHAG00000023125	adora1b (ENSCHAG00000023190)	ENSCHAG00000023193	mfn2 (ENSCHAG00000000163)	ENSCHAG00000000245	ENSCHAG00000000287	ENSCHAG00000000291	ENSCHAG00000000297	ENSCHAG00000000318 #22	ENSCHAG00000000327 #22	ENSCHAG00000000833	skia (ENSCHAG00000001665) #7	ENSCHAG00000001765	si:ch211-251b21.1 (ENSCHAG00000001767) #17	plch2a (ENSCHAG00000001857) #14	pex10 (ENSCHAG00000003014) #12	ENSCHAG00000003132	ENSCHAG00000003174	nppal (ENSCHAG00000003202)	si:dkeyp-104h9.5 (ENSCHAG00000003221)	plod1a (ENSCHAG00000003555)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	gnb1a (ENSDCDG00000028837)	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)	plod1a (ENSDCDG00000017733)
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028851	GABRD (ENSDCDG00000028874)	ENSDCDG00000028903	ENSDCDG00000014245	NPHP4 (ENSDCDG00000014253)	dffb (ENSDCDG00000014277)	ENSDCDG00000014286	b3gnt7l (ENSDCDG00000014293)	CEP104 (ENSDCDG00000014313)	lrrc47 (ENSDCDG00000014361)	mad2l2 (ENSDCDG00000014367)	ENSDCDG00000014374 #22	ENSDCDG00000014379 #22	ENSDCDG00000014387 #22	ENSDCDG00000014399 #22	ENSDCDG00000014415 #22	ENSDCDG00000014417	prkcz (ENSDCDG00000014491)	skia (ENSDCDG00000017152) #7	ENSDCDG00000017153 #10	si:ch211-251b21.1 (ENSDCDG00000017155) #17	plch2a (ENSDCDG00000017158) #14	pex10 (ENSDCDG00000017163) #12	mthfr (ENSDCDG00000017175)	CLCN6 (ENSDCDG00000017587)	ENSDCDG00000017594	ENSDCDG00000017596	ENSDCDG00000017600	si:dkeyp-104h9.5 (ENSDCDG00000017607)	plod1a (ENSDCDG00000017733)	mfn2 (ENSDCDG00000021481)
Otophysi	ANCESTRAL SPECIES	309	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a #22	ENSGT00950000183126.a.p.b #22
Characiphysae	ANCESTRAL SPECIES	41	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000011947	ENSGT00940000157524	ENSGT00390000013347.b	ENSGT00390000014490	ENSGT01000000214967	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00520000060291	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a.a.a #22	ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Characiphysae_b	ANCESTRAL SPECIES	100														ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00510000051272.g	ENSGT00950000183297	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k
Characoidei	ANCESTRAL SPECIES	99														ENSGT00950000183126.a.p.a.b #22	ENSGT00950000183126.a.p.a.a.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00640000091523	ENSGT00940000157140.a	ENSGT00940000158126	ENSGT00730000113416	ENSGT00940000165045	ENSGT00390000002743	ENSGT00390000009065	ENSGT01050000244838.H.c.a	ENSGT00940000155674.uc	ENSGT00940000157368.m	ENSGT00390000014771.b.b	ENSGT00940000158739.c	ENSGT01030000234573.A.b.b.b.k	ENSGT00390000017443	ENSGT00390000009578
Red-bellied piranha	MODERN SPECIES	516														ENSPNAG00000014973 #22	ENSPNAG00000014953 #22	zgc:158862 (ENSPNAG00000003334) #22	cbwd (ENSPNAG00000014933)	foxd5 (ENSPNAG00000014918)	pgm5 (ENSPNAG00000014899)	ENSPNAG00000003301	ndufaf2 (ENSPNAG00000003292)	smim15 (ENSPNAG00000003285)	ercc8 (ENSPNAG00000003280)	elovl7a (ENSPNAG00000014807)	PDE4D (ENSPNAG00000003249)	rab3c (ENSPNAG00000003227)	si:dkey-190g11.3 (ENSPNAG00000014694)	plk2b (ENSPNAG00000003208)	mier3b (ENSPNAG00000014608)	mrps36 (ENSPNAG00000014559)
Mexicana tetra	MODERN SPECIES	1238													ENSAMXG00000041906 #22	ENSAMXG00000006469 #22	ENSAMXG00000043767 #22	ENSAMXG00000014771 #22
Electric eel	MODERN SPECIES	220										lhx4 (ENSEEEG00000012297)	qsox1 (ENSEEEG00000012293)	ENSEEEG00000012288	ENSEEEG00000012282	CACNA1E (ENSEEEG00000011866)	ENSEEEG00000011854 #22	zgc:158862 (ENSEEEG00000011853) #22	cbwd (ENSEEEG00000011849)	foxd5 (ENSEEEG00000011846)	pgm5 (ENSEEEG00000011741)	ENSEEEG00000011735	smim15 (ENSEEEG00000011734)	ndufaf2 (ENSEEEG00000011732)	ercc8 (ENSEEEG00000011665)	elovl7a (ENSEEEG00000011663)	ENSEEEG00000011662	ENSEEEG00000011661	PDE4D (ENSEEEG00000011209)	rab3c (ENSEEEG00000011194)	si:dkey-190g11.3 (ENSEEEG00000011189)	plk2b (ENSEEEG00000010909)	mier3b (ENSEEEG00000010904)
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	24	prkar2aa (ENSIPUG00000007107)	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)	cenph (ENSIPUG00000008396)
Channel catfish	MODERN SPECIES	24	hyal3 (ENSIPUG00000007146)	si:dkey-20d21.12 (ENSIPUG00000007162)	amt (ENSIPUG00000007178)	ifrd2 (ENSIPUG00000007228)	dffb (ENSIPUG00000007254)	c5h1orf174 (ENSIPUG00000007281)	b3gnt7l (ENSIPUG00000007301)	cep104 (ENSIPUG00000007347)	lrrc47 (ENSIPUG00000007426)	smim1 (ENSIPUG00000007441)	mad2l2 (ENSIPUG00000007458)	ENSIPUG00000007568 #22	ENSIPUG00000007669 #22	ENSIPUG00000007687 #22	ENSIPUG00000007745 #22	ENSIPUG00000007833 #22	cbwd3 (ENSIPUG00000007877)	Pgm5 (ENSIPUG00000007906)	tmem252 (ENSIPUG00000007983)	ndufaf2 (ENSIPUG00000008002)	smim15 (ENSIPUG00000008048)	ERCC8 (ENSIPUG00000008060)	elovl7 (ENSIPUG00000008149)	pde4d (ENSIPUG00000008197)	rab3c (ENSIPUG00000008295)	si:dkey-190g11.3 (ENSIPUG00000008322)	plk2 (ENSIPUG00000008329)	mier3b (ENSIPUG00000008350)	mrps36 (ENSIPUG00000008389)	cenph (ENSIPUG00000008396)	pola2 (ENSIPUG00000008448)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT00940000154171.A.e	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT01000000214967	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b.q	ENSGT00950000183126.a.p.a.a.d #22	ENSGT00950000183126.a.p.a.a.c.b.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00390000017353	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT01030000234564.a.a.b.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT01030000234633.B.b.b	ENSGT00390000008161.a.a.a.a	ENSGT01020000230412.B.b.b.b.g.b	ENSGT00940000168127.a.a	ENSGT00940000157989.a.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37					ENSGT00390000014490.m	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00940000153395.b.q.b	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000157989.a.a.a	ENSGT00940000156911.i.a	ENSGT00390000015162.c.a
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00390000016496.e	ENSGT00940000165603.e	ENSGT00390000013405.h	ENSGT00530000063489.b.c	ENSGT01030000235198.a	ENSGT00940000153395.b.q.a.b.a	ENSGT00950000183126.a.p.a.b.c #22	ENSGT00950000183126.a.p.a.a.d.a.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.a #22	ENSGT00950000183126.a.p.b.g.a #22	ENSGT00390000017353.o	ENSGT00530000063540.a.h	ENSGT00950000182839.B.a.b.a	ENSGT00390000016950.lb.a	ENSGT01030000234564.a.a.b.a.e.b	ENSGT00950000183062.a.b.b.b.a	ENSGT00940000159667.a.d	ENSGT00940000164755.A.r	ENSGT00940000159855.e	ENSGT01030000234637.b.c.g.b	ENSGT01030000234633.B.b.b.d	ENSGT00390000008161.a.a.a.a.c	ENSGT00940000168127.a.a.b	ENSGT00940000168127.a.a.a	ENSGT00940000157989.a.a.b.a
Common carp reference	MODERN SPECIES	17	ENSCCRG00000078314	ENSCCRG00000004279	ENSCCRG00000074229	ENSCCRG00000055673	ENSCCRG00000060850	ENSCCRG00000062728	si:ch211-147a11.3 (ENSCCRG00000071747)	b3gnt7l (ENSCCRG00000017263)	ENSCCRG00000068492	lrrc47 (ENSCCRG00000017277)	mad2l2 (ENSCCRG00000017280)	ENSCCRG00000017282 #22	ENSCCRG00000054500	ENSCCRG00000042993 #22	ENSCCRG00000042987 #22	ENSCCRG00000066303 #22	ENSCCRG00000034269	apex2 (ENSCCRG00000081936)	ENSCCRG00000077807	csde1 (ENSCCRG00000031544)	porcnl (ENSCCRG00000031429)	ENSCCRG00000068324	ENSCCRG00000051531	ENSCCRG00000078757	cacna1fb (ENSCCRG00000051481)	sypa (ENSCCRG00000075272)	ENSCCRG00000000731	ENSCCRG00000054258	samd10a (ENSCCRG00000000720)	ENSCCRG00000014062	ythdf1 (ENSCCRG00000014046)
Golden-line barbel	MODERN SPECIES	15	ela2l (ENSSGRG00000027362)	ela2 (ENSSGRG00000027383)	fhad1 (ENSSGRG00000027525)	ENSSGRG00000027528	AJAP1 (ENSSGRG00000027530)	ENSSGRG00000027535	dffb (ENSSGRG00000027537)	si:ch211-147a11.3 (ENSSGRG00000027539)	b3gnt7l (ENSSGRG00000027540)	lrrc47 (ENSSGRG00000027548)	mad2l2 (ENSSGRG00000027553)	ENSSGRG00000027565	ENSSGRG00000027566 #22	ENSSGRG00000027567 #22	ENSSGRG00000027568 #22	ENSSGRG00000027570 #22	ENSSGRG00000027572	apex2 (ENSSGRG00000027573)	ENSSGRG00000027584	csde1 (ENSSGRG00000027611)	porcnl (ENSSGRG00000029282)	PDZD4 (ENSSGRG00000029297)	ENSSGRG00000029301	cacna1fb (ENSSGRG00000029342)	sypa (ENSSGRG00000030324)	ENSSGRG00000030325	ENSSGRG00000030326	uckl1a (ENSSGRG00000030327)	ENSSGRG00000030328	nkain5 (ENSSGRG00000030330)	ythdf1 (ENSSGRG00000030333)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2176														ENSCARG00000048998 #22	ENSCARG00000048879 #22	ENSCARG00000048841 #22	ENSCARG00000048824	ENSCARG00000048813	csde1 (ENSCARG00000044630)	porcnl (ENSCARG00000044501)	PDZD4 (ENSCARG00000044487)	IQSEC2 (ENSCARG00000044360)
Goldfish	MODERN SPECIES	873							ENSCARG00000058694	dffb (ENSCARG00000058726)	si:ch211-147a11.3 (ENSCARG00000058888)	b3gnt7l (ENSCARG00000058899)	CEP104 (ENSCARG00000058932)	lrrc47 (ENSCARG00000059069)	ENSCARG00000059084	mad2l2 (ENSCARG00000059105)	ENSCARG00000059158 #22	ENSCARG00000059172 #22	ENSCARG00000059200	ENSCARG00000059214	csde1 (ENSCARG00000059438)	porcnl (ENSCARG00000064562)	PDZD4 (ENSCARG00000064637)	IQSEC2 (ENSCARG00000064654)	ENSCARG00000064825	cacna1fb (ENSCARG00000064845)	sypa (ENSCARG00000065103)	samd10a (ENSCARG00000065114)	si:dkey-70p6.1 (ENSCARG00000065130)	nkain5 (ENSCARG00000065137)	ythdf1 (ENSCARG00000065145)	gid8a (ENSCARG00000065166)	dnajc5aa (ENSCARG00000065180)
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c
Goldfish	MODERN SPECIES	3327					NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00510000048586.b	ENSGT00510000048827.r.a	ENSGT00390000014490.n	ENSGT00390000016496.f	ENSGT00940000165603.f	ENSGT00390000013405.g	ENSGT00530000063489.b.d	ENSGT01030000235198.b	ENSGT00940000153395.b.q.a.a	ENSGT00940000153395.b.r	ENSGT00950000183126.a.p.a.a.d.b #22	ENSGT00950000183126.a.p.a.a.d.a.a #22	ENSGT00950000183126.a.p.a.a.c.a #22	ENSGT00950000183126.a.p.b.g.b #22	ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT00940000162992.h	ENSGT01030000234637.b.c.g.a	ENSGT00940000158528.f	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a
Cyprininae_a	ANCESTRAL SPECIES	190															ENSGT00950000183126.a.p.a.a.c.b.b.b #22	ENSGT00950000183126.a.p.b.h.a #22	ENSGT00390000017353.p	ENSGT00530000063540.a.g	ENSGT00950000182839.B.a.b.b	ENSGT00390000016950.lb.b	ENSGT01030000234564.a.a.b.a.e.a	ENSGT00950000183062.a.b.b.b.b	ENSGT00940000159667.a.c	ENSGT00940000164755.A.q	ENSGT00940000159855.f	ENSGT01030000234637.b.c.g.a	ENSGT00990000210169	ENSGT01030000234633.B.b.b.c	ENSGT00390000008161.a.a.a.a.d	ENSGT01020000230412.B.b.b.b.g.b.a	ENSGT00940000157989.a.a.b.b
Common carp reference	MODERN SPECIES	23	AJAP1 (ENSCCRG00000002467)	NPHP4 (ENSCCRG00000078735)	dffb (ENSCCRG00000071149)	si:ch211-147a11.3 (ENSCCRG00000038413)	ENSCCRG00000017274	lrrc47 (ENSCCRG00000055501)	ENSCCRG00000040612	ENSCCRG00000004391 #22	ENSCCRG00000066084 #22	ENSCCRG00000076037	zgc:153759 (ENSCCRG00000013364) #22	ENSCCRG00000016305	ENSCCRG00000066418	ENSCCRG00000048925 #22	ENSCCRG00000048930 #22	ENSCCRG00000051872 #22	ENSCCRG00000052143	apex2 (ENSCCRG00000052142)	ENSCCRG00000070809	csde1 (ENSCCRG00000051610)	porcnl (ENSCCRG00000051537)	ENSCCRG00000076794	ENSCCRG00000053470	ENSCCRG00000062581	ENSCCRG00000073059	cacna1fb (ENSCCRG00000079247)	sypa (ENSCCRG00000043856)	ENSCCRG00000043847	ENSCCRG00000043841	samd10a (ENSCCRG00000014083)	uckl1a (ENSCCRG00000014066)
Golden-line barbel	MODERN SPECIES	383																ENSSGRG00000016691 #22	ENSSGRG00000016690	apex2 (ENSSGRG00000016689)	ENSSGRG00000016688	csde1 (ENSSGRG00000016609)	porcnl (ENSSGRG00000016558)	PDZD4 (ENSSGRG00000016554)	IQSEC2 (ENSSGRG00000016327)	ENSSGRG00000016320	cacna1fb (ENSSGRG00000012281)	sypa (ENSSGRG00000012213)	ENSSGRG00000012212	ENSSGRG00000012211	samd10a (ENSSGRG00000012210)	uckl1a (ENSSGRG00000011974)	nkain5 (ENSSGRG00000011970)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3327				NPHP4 (ENSCARG00000048672)	dffb (ENSCARG00000048646)	si:ch211-147a11.3 (ENSCARG00000048620)	b3gnt7l (ENSCARG00000048594)	CEP104 (ENSCARG00000048509)	lrrc47 (ENSCARG00000048471)	ENSCARG00000048457	MAD2L2 (ENSCARG00000048329)	ENSCARG00000048262 #22	ENSCARG00000048250 #22	ENSCARG00000048232 #22	ENSCARG00000048219 #22	ENSCARG00000048128 #22	ENSCARG00000048105	ENSCARG00000048089	csde1 (ENSCARG00000046826)	porcnl (ENSCARG00000046771)	PDZD4 (ENSCARG00000046756)	IQSEC2 (ENSCARG00000046642)
Goldfish	MODERN SPECIES	852				ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprininae	ANCESTRAL SPECIES	1468															ENSGT00950000183126.a.p.a.a.c.b.a #22	ENSGT00950000183126.a.p.b.h.b #22
Goldfish	MODERN SPECIES	852					ENSCARG00000056988	dffb (ENSCARG00000056975)	si:ch211-147a11.3 (ENSCARG00000056957)	b3gnt7l (ENSCARG00000056948)	CEP104 (ENSCARG00000056859)	ENSCARG00000056820	mad2l2 (ENSCARG00000056775)	ENSCARG00000056715 #22	ENSCARG00000056697 #22	ENSCARG00000056688 #22	ENSCARG00000056677 #22	ENSCARG00000056669 #22	ENSCARG00000056659 #22	ENSCARG00000056650	apex2 (ENSCARG00000056629)	csde1 (ENSCARG00000051825)	porcnl (ENSCARG00000051610)	PDZD4 (ENSCARG00000051598)	IQSEC2 (ENSCARG00000051577)
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.h.b #22
Golden-line barbel	MODERN SPECIES	1310																ENSSGRG00000013948 #22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	23	AJAP1 (ENSDARG00000038655)	ENSDARG00000069014	dffb (ENSDARG00000009748)	si:ch211-147a11.3 (ENSDARG00000069009)	b3gnt7l (ENSDARG00000053133)	CEP104 (ENSDARG00000060361)	lrrc47 (ENSDARG00000053138)	mad2l2 (ENSDARG00000042456)	zgc:153631 (ENSDARG00000068993) #22	ENSDARG00000092892 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000095193 #22	ENSDARG00000092381 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000068966 #22	ENSDARG00000089901 #22	ENSDARG00000069696	apex2 (ENSDARG00000008472)	ENSDARG00000090577	csde1 (ENSDARG00000074758)	porcnl (ENSDARG00000052455)	IQSEC2 (ENSDARG00000102125)	PDZD4 (ENSDARG00000098823)	ENSDARG00000025108	cacna1fb (ENSDARG00000023683)	sypa (ENSDARG00000110528)	plp2a (ENSDARG00000042972)	ENSDARG00000078052	samd10a (ENSDARG00000079978)	uckl1a (ENSDARG00000001686)	ythdf1 (ENSDARG00000016447)
Zebrafish	MODERN SPECIES	23	sypa (ENSDARG00000110528)	cacna1fb (ENSDARG00000023683)	ENSDARG00000025108	PDZD4 (ENSDARG00000098823)	IQSEC2 (ENSDARG00000102125)	porcnl (ENSDARG00000052455)	csde1 (ENSDARG00000074758)	ENSDARG00000090577	apex2 (ENSDARG00000008472)	ENSDARG00000069696	ENSDARG00000089901 #22	ENSDARG00000068966 #22	zgc:153759 (ENSDARG00000068969) #22	ENSDARG00000092381 #22	ENSDARG00000095193 #22	zgc:158862 (ENSDARG00000068991) #22	ENSDARG00000092892 #22	zgc:153631 (ENSDARG00000068993) #22	mad2l2 (ENSDARG00000042456)	lrrc47 (ENSDARG00000053138)	CEP104 (ENSDARG00000060361)	b3gnt7l (ENSDARG00000053133)	si:ch211-147a11.3 (ENSDARG00000069009)	dffb (ENSDARG00000009748)	ENSDARG00000069014	AJAP1 (ENSDARG00000038655)	ENSDARG00000093080	ENSDARG00000094861	ENSDARG00000094473	fhad1 (ENSDARG00000056723)	ela2 (ENSDARG00000056744)
Euteleosteomorpha	ANCESTRAL SPECIES	61	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT01030000235198	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00970000197149	ENSGT00940000169392	ENSGT00940000171201	ENSGT00530000065390	ENSGT00940000165284
Protacanthopterygii	ANCESTRAL SPECIES	186							ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000156186.k	ENSGT00940000153792.B.p	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12
Salmoninae	ANCESTRAL SPECIES	1362															ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a.ub.b #22
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	266															ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000153739.a.a.h	ENSGT00390000015634.i	ENSGT00940000164771.a.f	ENSGT00940000157198.z	ENSGT00990000205866.a	ENSGT00510000048446 #12	ENSGT00940000158374.c.d #14	ENSGT00940000163942.b.e #17	ENSGT00940000160546.b #7	ENSGT00940000153497.A.d	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00940000153792.B.p.a	ENSGT00940000161281	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163961.a.a.b	ENSGT00940000163961.a.a.a.f	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000166426.g	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000157877.a.a
River trout	DUPLICATION
River trout	MODERN SPECIES	20	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)
River trout	MODERN SPECIES	20	ENSSTUG00000017390	pex10 (ENSSTUG00000017395) #12	plch2a (ENSSTUG00000017430) #14	skia (ENSSTUG00000017618) #7	prkcz (ENSSTUG00000017660)	ENSSTUG00000018466 #22	ENSSTUG00000018528	ENSSTUG00000018530 #22	ENSSTUG00000018536 #22	ENSSTUG00000018552	ENSSTUG00000018556 #22	ENSSTUG00000018566 #22	ENSSTUG00000018571	ENSSTUG00000018580	ENSSTUG00000018599 #22	ENSSTUG00000018738 #22	ENSSTUG00000018755 #22	ENSSTUG00000018764 #22	ENSSTUG00000018789 #22	sars1 (ENSSTUG00000018806)	ENSSTUG00000018816	tmem106c (ENSSTUG00000018824)	ENSSTUG00000018846	eif4ba (ENSSTUG00000018998)	krt18a.2 (ENSSTUG00000019021)	krt18a.1 (ENSSTUG00000019059)	ENSSTUG00000019126	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019840	ENSSTUG00000020393	ENSSTUG00000020433
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17
Atlantic salmon	MODERN SPECIES	6	k2c8 (ENSSSAG00000074245)	krt18a.1 (ENSSSAG00000074296)	krt18a.2 (ENSSSAG00000074300)	eif4ba (ENSSSAG00000074310)	ENSSSAG00000074344	ENSSSAG00000074909	ENSSSAG00000109676	ENSSSAG00000074926	ENSSSAG00000074952 #22	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119	tm9sf4 (ENSSSAG00000063233)	plagl2 (ENSSSAG00000098600)	pofut1 (ENSSSAG00000063159)	kif3b (ENSSSAG00000063137)
Oncorhynchus	ANCESTRAL SPECIES	534															ENSGT00950000183126.a.p.a.ub.a.a.a.b #22	ENSGT00950000183126.a.p.b.k #22
Rainbow trout	MODERN SPECIES	30	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150	ENSOMYG00000074098	ENSOMYG00000003233	ENSOMYG00000003246	ENSOMYG00000003341	ENSOMYG00000059123 #22	ENSOMYG00000003739 #22	ENSOMYG00000018945	ENSOMYG00000074064	ENSOMYG00000053062	ENSOMYG00000060044 #22	ENSOMYG00000004142 #22	ENSOMYG00000004196 #22	ENSOMYG00000004359	ENSOMYG00000004448 #7	ENSOMYG00000057974	si:ch211-251b21.1 (ENSOMYG00000007953) #17	ENSOMYG00000007909 #14	pex10 (ENSOMYG00000007764) #12	tm9sf4 (ENSOMYG00000007426)	ENSOMYG00000053638	plagl2 (ENSOMYG00000007109)	pofut1 (ENSOMYG00000007088)	kif3b (ENSOMYG00000007067)	ENSOMYG00000056241	ENSOMYG00000061166	ENSOMYG00000074161
Oncorhynchus_a	ANCESTRAL SPECIES	685															ENSGT00950000183126.a.p.a.tb.a.a.a #22	ENSGT00950000183126.a.p.b.k #22
Coho salmon	MODERN SPECIES	8	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)	sars1 (ENSOKIG00005006030)	ENSOKIG00005006062 #22	ENSOKIG00005006107 #22	ENSOKIG00005006206	ENSOKIG00005006238 #22	ENSOKIG00005006279 #22	ENSOKIG00005006374 #22	PRKCZ (ENSOKIG00005006443)	SKI (ENSOKIG00005006789) #7	si:ch211-251b21.1 (ENSOKIG00005006806) #17	PLCH2 (ENSOKIG00005006908) #14	ENSOKIG00005007345	pex10 (ENSOKIG00005007356) #12	ENSOKIG00005007372	ENSOKIG00005007378	tm9sf4 (ENSOKIG00005007408)	plagl2 (ENSOKIG00005007631)	pofut1 (ENSOKIG00005007641)	kif3b (ENSOKIG00005007672)	ENSOKIG00005007759	MYT1 (ENSOKIG00005007791)
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.b #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.b.k #22	ENSGT00950000183126.a.p.a.tb.b.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.tb.b.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.a.a	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00390000004928.z
River trout	MODERN SPECIES	20	ENSSTUG00000018816	sars1 (ENSSTUG00000018806)	ENSSTUG00000018789 #22	ENSSTUG00000018764 #22	ENSSTUG00000018755 #22	ENSSTUG00000018738 #22	ENSSTUG00000018599 #22	ENSSTUG00000018580	ENSSTUG00000018571	ENSSTUG00000018566 #22	ENSSTUG00000018556 #22	ENSSTUG00000018552	ENSSTUG00000018536 #22	ENSSTUG00000018530 #22	ENSSTUG00000018528	ENSSTUG00000018466 #22	prkcz (ENSSTUG00000017660)	skia (ENSSTUG00000017618) #7	plch2a (ENSSTUG00000017430) #14	pex10 (ENSSTUG00000017395) #12	ENSSTUG00000017390	ENSSTUG00000017383	tm9sf4 (ENSSTUG00000017259)	plagl2 (ENSSTUG00000017238)	pofut1 (ENSSTUG00000017227)	kif3b (ENSSTUG00000017146)	PCMTD2 (ENSSTUG00000017134)	TBC1D22B (ENSSTUG00000016446)	ENSSTUG00000016414	plpbp (ENSSTUG00000016373)	tmed4 (ENSSTUG00000016345)
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000099494 #22	ENSSSAG00000086609 #22	ENSSSAG00000074972 #22	ENSSSAG00000074962 #22	ENSSSAG00000061429 #22	ENSSSAG00000061684 #22	ENSSSAG00000061624 #22	ENSSSAG00000108024 #22	ENSSSAG00000082322 #22	ENSSSAG00000074966 #22	ENSSSAG00000061788 #22	ENSSSAG00000085590 #22	ENSSSAG00000061491 #22	ENSSSAG00000120624 #22	ENSSSAG00000120187 #22	ENSSSAG00000061746 #22	ENSSSAG00000105477 ##29	ENSSSAG00000104531	ENSSSAG00000090415 #22	ENSSSAG00000098774	ENSSSAG00000061978	ENSSSAG00000102856	ENSSSAG00000063047 #7	ENSSSAG00000092396	ENSSSAG00000120223 ##29	ENSSSAG00000096554	si:ch211-251b21.1 (ENSSSAG00000068384) #17	ENSSSAG00000065267 #14	pex10 (ENSSSAG00000065127) #12	ENSSSAG00000065119	tm9sf4 (ENSSSAG00000063233)
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c	ENSGT00510000046985.o.c.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e	ENSGT00940000163886.B.b.a.m.b	ENSGT00940000161281	ENSGT00940000171106	ENSGT00940000153792.B.p.a	ENSGT00950000183126.a.p.a.ub.a.a.a.a.a.a #22	ENSGT00950000183126.a.p.a.ub.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.ub.b #22	ENSGT00950000183126.a.p.a.ub.a.b #22	ENSGT00950000183126.a.p.b.l #22	ENSGT00950000183126.a.p.a.tb.a.b #22	ENSGT00940000153497.A.d	ENSGT00940000160546.b #7	ENSGT00940000163942.b.e #17	ENSGT00940000158374.c.d #14	ENSGT00510000048446 #12	ENSGT00990000205866.a	ENSGT00940000157198.z	ENSGT00940000164771.a.f	ENSGT00390000015634.i	ENSGT00940000153739.a.a.h	ENSGT00950000183032.A.b.b.b.a.a.b	ENSGT00940000156364.a.a.c	ENSGT00940000157472.e.b	ENSGT00940000167283.a.c
Chinook salmon	MODERN SPECIES	102						ENSOTSG00005037786	tmem106c (ENSOTSG00005038572)	ENSOTSG00005038574	sars1 (ENSOTSG00005038578)	ENSOTSG00005038744 #22	ENSOTSG00005038746 #22	ENSOTSG00005038749 #22	ENSOTSG00005038753 #22	ENSOTSG00005038758	ENSOTSG00005038760 #22	ENSOTSG00005038801 #22	ENSOTSG00005038808 #22	prkcz (ENSOTSG00005038810)	ENSOTSG00005038811
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	11	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)	PCMTD2 (ENSELUG00000013754)	MYT1 (ENSELUG00000013803)
Northern pike	MODERN SPECIES	11	eif4ba (ENSELUG00000012490)	ENSELUG00000027783	ENSELUG00000012582	tmem106c (ENSELUG00000012636)	ENSELUG00000012657	sars1 (ENSELUG00000012684)	ENSELUG00000025300	ENSELUG00000012768	ENSELUG00000012882 #22	ENSELUG00000012807 #22	ENSELUG00000012744 #22	TLR5 (ENSELUG00000012869)	ENSELUG00000012866 #22	ENSELUG00000029238	ENSELUG00000012938 #22	ENSELUG00000012997 #22	ENSELUG00000001396 #22	prkcz (ENSELUG00000013042)	skia (ENSELUG00000013068) #7	ENSELUG00000032506	MORN1 (ENSELUG00000013138) #10	si:ch211-251b21.1 (ENSELUG00000013183) #17	plch2a (ENSELUG00000013366) #14	pex10 (ENSELUG00000013445) #12	ENSELUG00000013457	tm9sf4 (ENSELUG00000013512)	plagl2 (ENSELUG00000013532)	pofut1 (ENSELUG00000013687)	ENSELUG00000013715	kif3b (ENSELUG00000013731)	PCMTD2 (ENSELUG00000013754)
Acanthomorphata	ANCESTRAL SPECIES	136	ENSGT00390000013792	ENSGT01000000214413.b.a.b.b.a	ENSGT00900000141054	ENSGT00940000160122	ENSGT00950000183462	ENSGT00390000014794.a	ENSGT00510000048586	ENSGT00510000048827	ENSGT00390000014490	ENSGT00390000016496	ENSGT00940000165603	ENSGT00390000013405	ENSGT00530000063489.b	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000012490	ENSGT00940000159291	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c
Euacanthomorphacea	ANCESTRAL SPECIES	73	ENSGT00390000016496	ENSGT00390000014490	ENSGT00510000048827	ENSGT00510000048586	ENSGT00390000014794.a	ENSGT00950000183462	ENSGT00940000160122	ENSGT00900000141054	ENSGT01000000214413.b.a.b.b.a	ENSGT00390000013792	ENSGT00520000060938	ENSGT00940000159351	ENSGT00940000161002	ENSGT00940000153395.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000161806 #10	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00950000182931.A.a.b	ENSGT01030000234578.B.b.a	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00950000182970.A.b	ENSGT00390000017394
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT01010000223737
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000156313.c.b	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT00940000177582	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Haplochromini_A	DUPLICATION
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431	ENSGT00940000158435
Zebra mbuna	DUPLICATION
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1100	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)	nadkb (ENSMZEG00005024457)
Zebra mbuna	MODERN SPECIES	1100	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)	nadkb (ENSMZEG00005024457)	ENSMZEG00005024459
Zebra mbuna	MODERN SPECIES	1102	ENSMZEG00005010589	ENSMZEG00005010565	ogt.2 (ENSMZEG00005010496)	gcna (ENSMZEG00005010480)	CETN1 (ENSMZEG00005010468)	nsdhl (ENSMZEG00005010461)	ENSMZEG00005010417	fut11 (ENSMZEG00005010400)	RAB9B (ENSMZEG00005010392)	plp1a (ENSMZEG00005010374)	pcdh20 (ENSMZEG00005010362)	si:dkey-27i16.2 (ENSMZEG00005010357)	nlgn3a (ENSMZEG00005010342)	ENSMZEG00005010313	ENSMZEG00005010287 #22	ENSMZEG00005010271 #22	eda (ENSMZEG00005010252)	ENSMZEG00005010245	ENSMZEG00005010233	GJB1 (ENSMZEG00005010215)	gja2 (ENSMZEG00005010207)	vma21 (ENSMZEG00005010195)	mtnr1c (ENSMZEG00005010186)	neurl1b (ENSMZEG00005010146)	dusp1 (ENSMZEG00005010131)	ergic1 (ENSMZEG00005010107)	flt4 (ENSMZEG00005010055)	trim105 (ENSMZEG00005010044)	npy7r (ENSMZEG00005010036)	prelid1a (ENSMZEG00005010026)	mxd3 (ENSMZEG00005010016)
Eastern happy	MODERN SPECIES	9	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)	apoda.2 (ENSACLG00000011349)	samd7 (ENSACLG00000011343)	sec62 (ENSACLG00000011336)	nadkb (ENSACLG00000011335)
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.o.a.b #22
P. nyererei	MODERN SPECIES	1370																ENSPNYG00000024180 #22
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Eastern happy	MODERN SPECIES	9	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)	apoda.2 (ENSACLG00000011349)	samd7 (ENSACLG00000011343)
Zebra mbuna	MODERN SPECIES	1100	pnhd (ENSMZEG00005024401)	admp (ENSMZEG00005024402)	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)
Lyretail cichlid	MODERN SPECIES	313	colec12 (ENSNBRG00000010246)	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)	sec62 (ENSNBRG00000011453)
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	9	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)	apoda.1 (ENSONIG00000018635)	apoda.2 (ENSONIG00000028478)	apoda.2 (ENSONIG00000018633)
Nile tilapia	MODERN SPECIES	9	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)	apoda.1 (ENSONIG00000018635)	apoda.2 (ENSONIG00000028478)	apoda.2 (ENSONIG00000018633)	samd7 (ENSONIG00000018632)	sec62 (ENSONIG00000018630)
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.o.b #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT00940000177582	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00940000181423	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075
Haplochromini	ANCESTRAL SPECIES	2	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000153311.b.b	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT01030000234633.B.a.d	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000156252.qb	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00950000183154.b.a.a.b	ENSGT00940000154920.bb.a	ENSGT00530000063668.A.c	ENSGT00950000183074.A.a.b	ENSGT00940000157171	ENSGT00390000015525.b	ENSGT00950000182837.a.a.b	ENSGT01050000244842.a.a.b.b.b.h.b.a	ENSGT01050000244842.a.a.b.b.b.h.b.b.d	ENSGT01050000244842.a.a.b.b.b.h.b.b.c	ENSGT01050000244842.a.a.b.b.b.g	ENSGT00940000163883.J	ENSGT00940000164732.B	ENSGT00940000168373	ENSGT00950000183126.a.p.b.o.a.b #22	ENSGT00950000183126.a.p.b.o.b #22	ENSGT00950000183126.a.p.b.o.a.a #22	ENSGT01090000260052.a.a.a.a.e.a.b	ENSGT00440000033408.a.b	ENSGT00950000183138.a.a.b.v.b	ENSGT01030000234667.a.a.a.b.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000164239.b.a	ENSGT00500000045505.a	ENSGT00510000046981.b.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.a.a.b	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1100	admp (ENSMZEG00005024402)	CIB3 (ENSMZEG00005024404)	rab8a (ENSMZEG00005024406)	TPM4 (ENSMZEG00005024409)	ap1m1 (ENSMZEG00005024413)	ENSMZEG00005024415	ENSMZEG00005024416	ENSMZEG00005024418	DNAH8 (ENSMZEG00005024421)	rx2 (ENSMZEG00005024425)	cplx4c (ENSMZEG00005024427)	ATCAY (ENSMZEG00005024428)	nmrk2 (ENSMZEG00005024429)	loxl5b (ENSMZEG00005024431)	ENSMZEG00005024432 #22	ENSMZEG00005024433 #22	ENSMZEG00005024434 #22	ENSMZEG00005024435 #22	ENSMZEG00005024437	ENSMZEG00005024439	ENSMZEG00005024440	ACKR4 (ENSMZEG00005024442)	e2f5 (ENSMZEG00005024443)	ENSMZEG00005024444	ENSMZEG00005024447	and2 (ENSMZEG00005024448)	apoda.1 (ENSMZEG00005024450)	apoda.2 (ENSMZEG00005024451)	apoda.2 (ENSMZEG00005024452)	samd7 (ENSMZEG00005024454)	sec62 (ENSMZEG00005024455)
Zebra mbuna	MODERN SPECIES	1102	kctd12b (ENSMZEG00005011305)	ENSMZEG00005010589	ENSMZEG00005010565	ogt.2 (ENSMZEG00005010496)	gcna (ENSMZEG00005010480)	CETN1 (ENSMZEG00005010468)	nsdhl (ENSMZEG00005010461)	ENSMZEG00005010417	fut11 (ENSMZEG00005010400)	RAB9B (ENSMZEG00005010392)	plp1a (ENSMZEG00005010374)	pcdh20 (ENSMZEG00005010362)	si:dkey-27i16.2 (ENSMZEG00005010357)	nlgn3a (ENSMZEG00005010342)	ENSMZEG00005010313	ENSMZEG00005010287 #22	ENSMZEG00005010271 #22	eda (ENSMZEG00005010252)	ENSMZEG00005010245	ENSMZEG00005010233	GJB1 (ENSMZEG00005010215)	gja2 (ENSMZEG00005010207)	vma21 (ENSMZEG00005010195)	mtnr1c (ENSMZEG00005010186)	neurl1b (ENSMZEG00005010146)	dusp1 (ENSMZEG00005010131)	ergic1 (ENSMZEG00005010107)	flt4 (ENSMZEG00005010055)	trim105 (ENSMZEG00005010044)	npy7r (ENSMZEG00005010036)	prelid1a (ENSMZEG00005010026)
Eastern happy	MODERN SPECIES	9	EMILIN2 (ENSACLG00000013312)	adcyap1b (ENSACLG00000013303)	yes1 (ENSACLG00000013282)	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)
Burton s mouthbrooder	MODERN SPECIES	1915																ENSHBUG00000021325 #22
Lyretail cichlid	MODERN SPECIES	313	clul1 (ENSNBRG00000010221)	colec12 (ENSNBRG00000010246)	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)
Nile tilapia	MODERN SPECIES	9	adcyap1b (ENSONIG00000009205)	yes1 (ENSONIG00000032220)	clul1 (ENSONIG00000009196)	colec12 (ENSONIG00000009194)	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Nile tilapia	MODERN SPECIES	9	yes1 (ENSONIG00000032220)	clul1 (ENSONIG00000009196)	colec12 (ENSONIG00000009194)	ENSONIG00000040444	stam (ENSONIG00000009189)	tmem236 (ENSONIG00000009188)	cacnb2b (ENSONIG00000009185)	mrc1b (ENSONIG00000009182)	mrc1b (ENSONIG00000042419)	mrc1b (ENSONIG00000009179)	mrc1b (ENSONIG00000036225)	mrc1b (ENSONIG00000009176)	ENSONIG00000039380	ENSONIG00000030638	ENSONIG00000009171 #22	ENSONIG00000009172 #22	ENSONIG00000034390	ENSONIG00000035204	ENSONIG00000008912 #22	ENSONIG00000021028	ENSONIG00000008910 #22	ENSONIG00000021417	ENSONIG00000008906	ENSONIG00000008904	ENSONIG00000042971	ENSONIG00000034261	ENSONIG00000035783	ACKR4 (ENSONIG00000021247)	ENSONIG00000018639	ENSONIG00000018638	and2 (ENSONIG00000018636)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Burton s mouthbrooder	MODERN SPECIES	1960																ENSHBUG00000019955 #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b.p #22
Eastern happy	MODERN SPECIES	9	adcyap1b (ENSACLG00000013303)	yes1 (ENSACLG00000013282)	clul1 (ENSACLG00000013198)	colec12 (ENSACLG00000013169)	stam (ENSACLG00000013142)	tmem236 (ENSACLG00000013085)	cacnb2b (ENSACLG00000013041)	mrc1b (ENSACLG00000013001)	mrc1b (ENSACLG00000012929)	mrc1b (ENSACLG00000012903)	mrc1b (ENSACLG00000012834)	ENSACLG00000012803	ENSACLG00000012795	ENSACLG00000012783	ENSACLG00000012773 #22	ENSACLG00000012745 #22	ENSACLG00000012740	ENSACLG00000012713 #22	ENSACLG00000012710	ENSACLG00000012658 #22	ENSACLG00000012630	ENSACLG00000011918	ENSACLG00000011890	ENSACLG00000011827	ACKR4 (ENSACLG00000011822)	e2f5 (ENSACLG00000011786)	ENSACLG00000011753	ENSACLG00000011720	and2 (ENSACLG00000011361)	apoda.1 (ENSACLG00000011357)	apoda.2 (ENSACLG00000011353)
Lyretail cichlid	MODERN SPECIES	313	stam (ENSNBRG00000010399)	tmem236 (ENSNBRG00000010608)	cacnb2b (ENSNBRG00000010645)	mrc1b (ENSNBRG00000010678)	ENSNBRG00000010745	ENSNBRG00000010760	ENSNBRG00000010773	ENSNBRG00000010790	ENSNBRG00000010803	ENSNBRG00000010820	ENSNBRG00000010835	ENSNBRG00000010859	ENSNBRG00000010891	ENSNBRG00000010907 #22	ENSNBRG00000010958 #22	ENSNBRG00000010988 #22	ENSNBRG00000011010	ENSNBRG00000011025	ENSNBRG00000011052	ENSNBRG00000011069	ACKR4 (ENSNBRG00000011083)	e2f5 (ENSNBRG00000011093)	ENSNBRG00000011117	ENSNBRG00000011206	and2 (ENSNBRG00000011222)	apoda.1 (ENSNBRG00000011246)	apoda.2 (ENSNBRG00000011310)	apoda.2 (ENSNBRG00000011421)	samd7 (ENSNBRG00000011438)	sec62 (ENSNBRG00000011453)	nadkb (ENSNBRG00000011487)
Midas cichlid	MODERN SPECIES	892																ENSACIG00000006196 #22	ENSACIG00000006189	ENSACIG00000006137	ENSACIG00000006113
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284
Cyprinodontoidei	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742
NAME_4	ANCESTRAL SPECIES	454															ENSGT00950000183126.a.p.a.h #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	81																ENSCVAG00000021242 #22
Sheepshead minnow	MODERN SPECIES	594															ENSCVAG00000006989	ENSCVAG00000007060 #22	prkcz (ENSCVAG00000007182)	skia (ENSCVAG00000007240) #7	ddost (ENSCVAG00000007282)	TMEM121B (ENSCVAG00000007289)	mkrn1 (ENSCVAG00000007296)	tmem178bb (ENSCVAG00000007312)	LRRC24 (ENSCVAG00000007316)	LONP1 (ENSCVAG00000007639)
Sheepshead minnow	MODERN SPECIES	1119														NELL1 (ENSCVAG00000000704)	ENSCVAG00000007572 #22	ENSCVAG00000007587 #22
Sheepshead minnow	MODERN SPECIES	907				ENSCVAG00000021852	ENSCVAG00000000556	tubb2b (ENSCVAG00000021868)	ENSCVAG00000021885	FKBP15 (ENSCVAG00000021919)	fgf17 (ENSCVAG00000021931)	entpd2a.1 (ENSCVAG00000000561)	nelfb (ENSCVAG00000021970)	ENSCVAG00000021986	arrdc1a (ENSCVAG00000021997)	ehmt1a (ENSCVAG00000022013)	ENSCVAG00000022029 #22	ENSCVAG00000022060 #22
Mummichog	MODERN SPECIES	385																ENSFHEG00000014308 #22	prkcz (ENSFHEG00000014264)	skia (ENSFHEG00000014257) #7
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00390000007643	ENSGT00940000154964.y.b	ENSGT00940000165284	ENSGT00940000156151	ENSGT00940000153314.b.a.a	ENSGT00390000017394	ENSGT00950000182970.A.b	ENSGT00390000013727.c	ENSGT00940000164771.b	ENSGT00520000055578.a.a.c	ENSGT00940000156364.a.b	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000160063.h	ENSGT00940000165955	ENSGT00940000156759.a.a	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00940000177283	ENSGT00940000158219.a
Poecilia	ANCESTRAL SPECIES	26	ENSGT00390000007643	ENSGT00940000154964.y.b	ENSGT00940000165284	ENSGT00940000156151	ENSGT00940000153314.b.a.a	ENSGT00390000017394	ENSGT00950000182970.A.b	ENSGT00390000013727.c	ENSGT00940000164771.b	ENSGT00520000055578.a.a.c	ENSGT00940000156364.a.b	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000160063.h	ENSGT00940000165955	ENSGT00940000156759.a.a	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00940000177283	ENSGT00940000158219.a
NAME_6	ANCESTRAL SPECIES	508													ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.b #22
Amazon molly	MODERN SPECIES	505													skia (ENSPFOG00000014560) #7	ENSPFOG00000021808	prkcz (ENSPFOG00000014668)	ENSPFOG00000014747 #22	ENSPFOG00000023026	tmem82 (ENSPFOG00000014760)	ENSPFOG00000024806	SPEN (ENSPFOG00000014768)	ENSPFOG00000014859	fam131c (ENSPFOG00000015111)	clcnk (ENSPFOG00000015118)	hspb7 (ENSPFOG00000015177)	ZBTB17 (ENSPFOG00000015192)	ddost (ENSPFOG00000015244)	plekhm2 (ENSPFOG00000015306)	ENSPFOG00000015405	ARHGEF19 (ENSPFOG00000015575)	ENSPFOG00000015629	ENSPFOG00000023253
Sailfin molly	MODERN SPECIES	1287														skia (ENSPLAG00000018512) #7	prkcz (ENSPLAG00000018493)	ENSPLAG00000018419 #22
Guppy	MODERN SPECIES	459	si:dkeyp-104h9.5 (ENSPREG00000008812)	phc2a (ENSPREG00000008796)	ENSPREG00000008753	rcc2 (ENSPREG00000008729)	rpl22 (ENSPREG00000008671)	icmt (ENSPREG00000008641)	rtel1 (ENSPREG00000008595)	mfn2 (ENSPREG00000008521)	ENSPREG00000008508	ENSPREG00000008490	ENSPREG00000008330	porcnl (ENSPREG00000008284)	suv39h1b (ENSPREG00000008274)	ENSPREG00000008246	ENSPREG00000006872	ENSPREG00000006611 #22	prkcz (ENSPREG00000006532)	skia (ENSPREG00000006492) #7	si:ch211-251b21.1 (ENSPREG00000006446) #17	plch2a (ENSPREG00000006383) #14	pex10 (ENSPREG00000006359) #12	stk38a (ENSPREG00000006334)	dennd2da (ENSPREG00000006264)	ENSPREG00000006243	renbp (ENSPREG00000006197)	ENSPREG00000006157	rpl10 (ENSPREG00000006075)	FLNA (ENSPREG00000005812)	ENSPREG00000005751	MRPL49 (ENSPREG00000005735)	ENSPREG00000005714
Platyfish	MODERN SPECIES		tbc1d25 (ENSXMAG00000027860)	ndufb11 (ENSXMAG00000012836)	MTCH1 (ENSXMAG00000012838)	stk35 (ENSXMAG00000012847)	pdyn (ENSXMAG00000026772)	GMEB2 (ENSXMAG00000012852)	ENSXMAG00000024611 #22	ENSXMAG00000030091 #22	ENSXMAG00000027749 #22	ENSXMAG00000028612 #22	ENSXMAG00000012857	PORCN (ENSXMAG00000012871)	suv39h1b (ENSXMAG00000012872)	ENSXMAG00000012880	PAX7 (ENSXMAG00000012884)	ENSXMAG00000002044 #22	prkcz (ENSXMAG00000002016)	skia (ENSXMAG00000002008) #7	si:ch211-251b21.1 (ENSXMAG00000001997) #17	ENSXMAG00000021223	ENSXMAG00000024198	plch2a (ENSXMAG00000027549) #14	pex10 (ENSXMAG00000004872) #12	stk38a (ENSXMAG00000004852)	dennd2da (ENSXMAG00000004839)	ENSXMAG00000004838	renbp (ENSXMAG00000004821)	ENSXMAG00000004811	rpl10 (ENSXMAG00000004788)	FLNA (ENSXMAG00000004665)	ENSXMAG00000029296
Aplocheiloidei	ANCESTRAL SPECIES	60	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000003937	ENSGT00390000017253	ENSGT00390000014785	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151	ENSGT00940000165284	ENSGT00940000154964.y.b
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	627														ENSKMAG00000010683	ENSKMAG00000010658 #22	ENSKMAG00000010636 #22	prkcz (ENSKMAG00000010610)
Mangrove rivulus	MODERN SPECIES	439															large2 (ENSKMAG00000012626)	ENSKMAG00000012714 #22	zgc:194679 (ENSKMAG00000012753)
Oryzias	ANCESTRAL SPECIES	45	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Oryzias_b	ANCESTRAL SPECIES	48	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	616															ENSOMEG00000011646 #22	ENSOMEG00000011630 #22	prkcz (ENSOMEG00000011568)	ENSOMEG00000011369	ENSOMEG00000011361 #7	ENSOMEG00000011344
Indian medaka	MODERN SPECIES	392	ENSOMEG00000006771	suv39h1b (ENSOMEG00000006743)	gpr173 (ENSOMEG00000006708)	porcnl (ENSOMEG00000006697)	ENSOMEG00000000157	ENSOMEG00000006654	kcnab2b (ENSOMEG00000022219)	ENSOMEG00000022129	dedd (ENSOMEG00000022107)	tnnc1b (ENSOMEG00000022055)	nppal (ENSOMEG00000021994)	ENSOMEG00000021967	ENSOMEG00000021946	ARHGEF10L (ENSOMEG00000021907)	igsf21b (ENSOMEG00000021699)	ENSOMEG00000021674 #22
Javanese ricefish	MODERN SPECIES	21	gripap1 (ENSOJAG00000001076)	ENSOJAG00000001051	kcnd1 (ENSOJAG00000001037)	ENSOJAG00000001016	mfn2 (ENSOJAG00000000960)	PAX7 (ENSOJAG00000000769)	KCNAB2 (ENSOJAG00000000570)	dedd (ENSOJAG00000000541)	tnnc1b (ENSOJAG00000000531)	ENSOJAG00000000525	ENSOJAG00000000516	ARHGEF10L (ENSOJAG00000000455)	igsf21b (ENSOJAG00000000424)	ENSOJAG00000000401 #22	ENSOJAG00000000363 #22	ENSOJAG00000000356 #22	adrm1 (ENSOJAG00000000177)	ENSOJAG00000000161	ENSOJAG00000000129	ENSOJAG00000012080	porcnl (ENSOJAG00000011810)	suv39h1b (ENSOJAG00000011716)	ENSOJAG00000011702	ENSOJAG00000011694	gpr173 (ENSOJAG00000011683)	ENSOJAG00000011603	trappc6b (ENSOJAG00000011576)	ENSOJAG00000011531	EPHB2 (ENSOJAG00000010537)	LRRC38 (ENSOJAG00000010413)	mthfr (ENSOJAG00000009657)
Oryzias_a	ANCESTRAL SPECIES	54	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00940000157867.a.b	ENSGT00390000008714.a	ENSGT00940000153541.B	ENSGT00530000065390	ENSGT00940000154513.A	ENSGT00940000153798.A.b.h	ENSGT00390000002421.a	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00940000178358	ENSGT01100000264848	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128	ENSGT01030000234637.b.c.g
Japanese Medaka HdrR	MODERN SPECIES	21	kcnd1 (ENSORLG00000018330)	ENSORLG00000018299	mfn2 (ENSORLG00000025366)	ENSORLG00000023957	ENSORLG00000026958	dedd (ENSORLG00000024196)	tnnc1b (ENSORLG00000019408)	ENSORLG00000027984	nppal (ENSORLG00000025996)	nppb (ENSORLG00000027335)	ENSORLG00000024366	ENSORLG00000027273	ENSORLG00000009359	igsf21b (ENSORLG00000016826)	ENSORLG00000016829 #22	ENSORLG00000024029 #22	prkcz (ENSORLG00000016850)	ENSORLG00000024678	skia (ENSORLG00000016855) #7	ENSORLG00000022931	si:ch211-251b21.1 (ENSORLG00000016860) #17	ENSORLG00000028134	plch2a (ENSORLG00000016877) #14	ENSORLG00000029302	pex10 (ENSORLG00000016884) #12	ENSORLG00000016889	renbp (ENSORLG00000016904)	ENSORLG00000027554	ENSORLG00000016906	dennd2da (ENSORLG00000020542)	stk38a (ENSORLG00000016924)
Chinese medaka	MODERN SPECIES	49								ENSOSIG00000000580	KCNAB2 (ENSOSIG00000000572)	dedd (ENSOSIG00000000567)	tnnc1b (ENSOSIG00000000566)	nppal (ENSOSIG00000000565)	ENSOSIG00000000563	igsf21b (ENSOSIG00000000066)	ENSOSIG00000000054 #22	ENSOSIG00000015359 #22	prkcz (ENSOSIG00000015178)	ENSOSIG00000015177	skia (ENSOSIG00000015175) #7	plch2a (ENSOSIG00000015125) #14	ENSOSIG00000015112	renbp (ENSOSIG00000015062)	ENSOSIG00000015060	ENSOSIG00000015058	dennd2da (ENSOSIG00000015057)	stk38a (ENSOSIG00000015049)	ENSOSIG00000015046	ENSOSIG00000015044
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Carangaria_A	ANCESTRAL SPECIES	55															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Seriola	ANCESTRAL SPECIES	99															ENSGT00950000183126.a.p.a.jb.b #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Greater amberjack	DUPLICATION
Greater amberjack	MODERN SPECIES	134															ENSSDUG00000002783 #22	ENSSDUG00000002761 #22	prkcz (ENSSDUG00000002703)	skia (ENSSDUG00000002658) #7	ENSSDUG00000002639	si:ch211-251b21.1 (ENSSDUG00000002623) #17	plch2a (ENSSDUG00000002588) #14	pex10 (ENSSDUG00000002561) #12	renbp (ENSSDUG00000002522)	ENSSDUG00000002508	ENSSDUG00000002491	dennd2da (ENSSDUG00000002435)	stk38a (ENSSDUG00000002369)	MTCH1 (ENSSDUG00000002338)	stk35 (ENSSDUG00000002332)	pdyn (ENSSDUG00000002320)	GMEB2 (ENSSDUG00000002314)
Greater amberjack	MODERN SPECIES	345																ENSSDUG00000023835 #22
Yellowtail amberjack	MODERN SPECIES	2883	PTPRS (ENSSLDG00000018777)	FEM1A (ENSSLDG00000018755)	C2CD4C (ENSSLDG00000018743)	gpx4b (ENSSLDG00000018726)	ENSSLDG00000018659	ENSSLDG00000018094	ENSSLDG00000018017	ENSSLDG00000018010	ENSSLDG00000017995	ENSSLDG00000017989	epha4b (ENSSLDG00000017856)	ENSSLDG00000017808	ENSSLDG00000017790	ENSSLDG00000017774 #22	ENSSLDG00000017749 #22	ENSSLDG00000017719 #22	prkcz (ENSSLDG00000017623)	skia (ENSSLDG00000017587) #7	si:ch211-251b21.1 (ENSSLDG00000017560) #17	plch2a (ENSSLDG00000017482) #14	pex10 (ENSSLDG00000017454) #12	renbp (ENSSLDG00000017415)	ENSSLDG00000017400	ENSSLDG00000017380	ENSSLDG00000017323	dennd2da (ENSSLDG00000017223)	stk38a (ENSSLDG00000017161)	MTCH1 (ENSSLDG00000017133)	stk35 (ENSSLDG00000017122)	pdyn (ENSSLDG00000017106)	GMEB2 (ENSSLDG00000017090)
Barramundi perch	MODERN SPECIES	429															ENSLCAG00010001117 #22	ENSLCAG00010001110 #22	prkcz (ENSLCAG00010000953)	skia (ENSLCAG00010000872) #7
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015432	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254 #22	ENSMAMG00000024441 #22	ENSMAMG00000015206 #22	ENSMAMG00000015234 #22	ENSMAMG00000015242 #22	ENSMAMG00000015191 #22	ENSMAMG00000015153	ENSMAMG00000015127 #7	si:ch211-251b21.1 (ENSMAMG00000015096) #17	ENSMAMG00000015045	ENSMAMG00000015055 #14	pex10 (ENSMAMG00000015038) #12	ENSMAMG00000015011	ENSMAMG00000015003	ENSMAMG00000014999	ENSMAMG00000014930	ENSMAMG00000014883	ENSMAMG00000014870	stk35 (ENSMAMG00000014863)	ENSMAMG00000014860	GMEB2 (ENSMAMG00000026746)
Anabantoidei	ANCESTRAL SPECIES	84															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000009219	ENSBSLG00000009234	ENSBSLG00000009244	ENSBSLG00000009251	ENSBSLG00000009260	ENSBSLG00000009264	ENSBSLG00000009276	ENSBSLG00000009286	ENSBSLG00000009297	ENSBSLG00000009309	ENSBSLG00000009315	ENSBSLG00000009348	ENSBSLG00000009359	ENSBSLG00000009373	ENSBSLG00000009382 #22	ENSBSLG00000009434 #22	ENSBSLG00000009453 #22	ENSBSLG00000009471 #22	ENSBSLG00000009479 #22	ENSBSLG00000009496 #22	prkcz (ENSBSLG00000009557)	skia (ENSBSLG00000011690) #7	si:ch211-251b21.1 (ENSBSLG00000011925) #17	plch2a (ENSBSLG00000011981) #14	pex10 (ENSBSLG00000012308) #12	renbp (ENSBSLG00000013151)	ENSBSLG00000013317	ENSBSLG00000013339	dennd2da (ENSBSLG00000013349)	stk38a (ENSBSLG00000013441)	MTCH1 (ENSBSLG00000013567)
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010022090	tpk2 (ENSSAUG00010022091)	ENSSAUG00010022093	ENSSAUG00010022094	GMEB2 (ENSSAUG00010022097)	pdyn (ENSSAUG00010022098)	ENSSAUG00010022100	ENSSAUG00010022102	stk35 (ENSSAUG00010022103)	MTCH1 (ENSSAUG00010022104)	ENSSAUG00010022111	dedd (ENSSAUG00010022825)	ENSSAUG00010022826	kcnab2b (ENSSAUG00010022828)	ENSSAUG00010022841 #22	ENSSAUG00010022843 #22	prkcz (ENSSAUG00010022848)	ENSSAUG00010022906	ENSSAUG00010022908	skia (ENSSAUG00010022911) #7	ENSSAUG00010022917	ENSSAUG00010022920	si:ch211-251b21.1 (ENSSAUG00010022930) #17	plch2a (ENSSAUG00010022935) #14	pex10 (ENSSAUG00010022946) #12	renbp (ENSSAUG00010022948)	ENSSAUG00010022949	ENSSAUG00010022950	rpl10 (ENSSAUG00010022951)	FLNA (ENSSAUG00010000588)	ENSSAUG00010001454
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00950000183126.a.p.b #22	ENSGT00950000183126.a.p.a #22	ENSGT00940000153497.A	ENSGT00940000160546 #7	ENSGT00940000163942.b #17	ENSGT00940000158374.c #14	ENSGT00510000048446 #12	ENSGT00390000013740	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
European seabass	DUPLICATION
European seabass	MODERN SPECIES	14	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953	stk35 (ENSDLAG00005020931)
European seabass	MODERN SPECIES	14	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793	rpl10 (ENSDLAG00005021711)	ENSDLAG00005021707	ENSDLAG00005021663	ENSDLAG00005021656	ENSDLAG00005016178 #22	ENSDLAG00005032911 #22	ENSDLAG00005006462 #22	ENSDLAG00005028433 #22	ENSDLAG00005029036 #22	ENSDLAG00005021641 #22	ENSDLAG00005003670 #22	ENSDLAG00005021334	ENSDLAG00005021303 #7	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284) #17	ENSDLAG00005021209 #14	pex10 (ENSDLAG00005021198) #12	ENSDLAG00005021048	ENSDLAG00005028449	ENSDLAG00005034377	ENSDLAG00005034185	ENSDLAG00005029790	ENSDLAG00005020953
Perciformes	ANCESTRAL SPECIES	4	ENSGT00390000013740	ENSGT00510000048446 #12	ENSGT00940000158374.c #14	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00950000183126.a.p.b #22	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00940000159012	ENSGT00390000004928	ENSGT00510000046985.o	ENSGT00940000167283.a	ENSGT00940000157472	ENSGT00940000156364.a.a
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00990000203742	ENSGT00940000178358	ENSGT00390000013740	ENSGT00510000048446 #12	ENSGT00940000163942.b #17	ENSGT00940000160546 #7	ENSGT00940000153497.A	ENSGT00950000183126.a.p.a #22	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897	ENSGT00940000153588.b.f	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00390000003937	ENSGT00950000183126.a.p.b #22	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00940000159012	ENSGT00390000004928	ENSGT00510000046985.o	ENSGT00940000167283.a	ENSGT00940000157472	ENSGT00940000156364.a.a
Channel bull blenny	MODERN SPECIES	21	ENSCGOG00000015988	ENSCGOG00000015985	igsf21b (ENSCGOG00000015981)	VPS13D (ENSCGOG00000015582)	pex10 (ENSCGOG00000015552) #12	ENSCGOG00000015541 #17	ENSCGOG00000015539 ##29	skia (ENSCGOG00000015530) #7	prkcz (ENSCGOG00000013939)	ENSCGOG00000013902	rpl10 (ENSCGOG00000013893)	FLNA (ENSCGOG00000000997)	NINJ1 (ENSCGOG00000023905)	MRPL49 (ENSCGOG00000023902)	ENSCGOG00000023901	ENSCGOG00000023898 #22	ENSCGOG00000023896	atp2b3a (ENSCGOG00000020968)	ccnq (ENSCGOG00000020710)	ENSCGOG00000020705	zgc:101663 (ENSCGOG00000020702)	ap4b1 (ENSCGOG00000020692)	sephs3 (ENSCGOG00000020679)	ikbkg (ENSCGOG00000020664)	tmed4 (ENSCGOG00000020646)	plpbp (ENSCGOG00000020621)	snrpg (ENSCGOG00000020620)	ENSCGOG00000020619	TBC1D22B (ENSCGOG00000020228)	ENSCGOG00000020211	PCMTD2 (ENSCGOG00000020209)
Pike perch	MODERN SPECIES	102	ENSSLUG00000016461 #17	skia (ENSSLUG00000016443) #7	prkcz (ENSSLUG00000015208)	ENSSLUG00000015143 #22	ENSSLUG00000015139	ENSSLUG00000015133 #22	ENSSLUG00000015107 #22	ENSSLUG00000015088 #22	ENSSLUG00000015069	rpl10 (ENSSLUG00000015039)	FLNA (ENSSLUG00000013362)	emd (ENSSLUG00000013241)	ENSSLUG00000013239	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013236	ENSSLUG00000013229 #22	ENSSLUG00000013223	ENSSLUG00000013219	atp2b3b (ENSSLUG00000013076)	ccnq (ENSSLUG00000013050)	cfap126 (ENSSLUG00000013045)	zgc:101663 (ENSSLUG00000013044)	ap4b1 (ENSSLUG00000013003)	sephs3 (ENSSLUG00000012992)
Cottioidei	ANCESTRAL SPECIES																	ENSGT00950000183126.a.p.b #22
Lumpfish	MODERN SPECIES	22	MTCH1 (ENSCLMG00005000614)	dennd2da (ENSCLMG00005000603)	ENSCLMG00005000601	renbp (ENSCLMG00005000583)	pex10 (ENSCLMG00005000580) #12	plch2a (ENSCLMG00005000378) #14	si:ch211-251b21.1 (ENSCLMG00005000200) #17	ENSCLMG00005000162	skia (ENSCLMG00005000147) #7	prkcz (ENSCLMG00005000120)	ENSCLMG00005021337	rpl10 (ENSCLMG00005021325)	NINJ1 (ENSCLMG00005021207)	ENSCLMG00005021206	MRPL49 (ENSCLMG00005021205)	ENSCLMG00005021203 #22	ENSCLMG00005021202	ENSCLMG00005021201	ENSCLMG00005021149	ccnq (ENSCLMG00005021136)	ENSCLMG00005021133	ENSCLMG00005021132	ap4b1 (ENSCLMG00005021125)	sephs3 (ENSCLMG00005021118)	ikbkg (ENSCLMG00005021114)	tmed4 (ENSCLMG00005021105)	plpbp (ENSCLMG00005021097)	snrpg (ENSCLMG00005021094)	ENSCLMG00005021093	TBC1D22B (ENSCLMG00005021089)	TNNC1 (ENSCLMG00005021088)
Stickleback	MODERN SPECIES	11	snrpg (ENSGACG00000013201)	plpbp (ENSGACG00000013198)	tmed4 (ENSGACG00000013176)	ikbkg (ENSGACG00000013173)	sephs3 (ENSGACG00000013165)	ENSGACG00000013164	ap4b1 (ENSGACG00000013155)	zgc:101663 (ENSGACG00000013153)	ccnq (ENSGACG00000013143)	atp2b3a (ENSGACG00000013136)	ENSGACG00000022584	ENSGACG00000013130	MRPL49 (ENSGACG00000013129)	MRPL49 (ENSGACG00000013127)	ENSGACG00000013125	ENSGACG00000013117 #22	ENSGACG00000013110	ENSGACG00000013103	FLNA (ENSGACG00000013098)	rpl10 (ENSGACG00000013073)	ENSGACG00000013035	prkcz (ENSGACG00000013018)	ENSGACG00000013016	ENSGACG00000013014	skia (ENSGACG00000013007) #7	ENSGACG00000013002 #17	plch2a (ENSGACG00000012997) #14	tnnc1b (ENSGACG00000012954)	efhd2 (ENSGACG00000012943)	dedd (ENSGACG00000012937)	ENSGACG00000012890
Pinecone sodierfish	MODERN SPECIES	21	AJAP1 (ENSMMDG00005000339)	ENSMMDG00005000346	GABRD (ENSMMDG00005000353)	gnb1a (ENSMMDG00005000368)	nadka (ENSMMDG00005000396)	ENSMMDG00005000402	SLC35E2B (ENSMMDG00005000432)	SLC25A45 (ENSMMDG00005000477)	ENSMMDG00005000485	mad2l2 (ENSMMDG00005000492)	ENSMMDG00005000513 #22	ENSMMDG00005000531 #22	ENSMMDG00005000542	ENSMMDG00005000562 #22	ENSMMDG00005000592 #22	ENSMMDG00005000604 #22	prkcz (ENSMMDG00005000617)	skia (ENSMMDG00005000627) #7	ENSMMDG00005000647 #10	ENSMMDG00005000659 #17	ENSMMDG00005000706	pex10 (ENSMMDG00005000776) #12	dennd2da (ENSMMDG00005000783)	ENSMMDG00005000792	stk38a (ENSMMDG00005000802)	stk35 (ENSMMDG00005000813)	pdyn (ENSMMDG00005000816)	GMEB2 (ENSMMDG00005000820)	rtel1 (ENSMMDG00005000833)	icmt (ENSMMDG00005000845)	ENSMMDG00005000847
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES		ENSGMOG00000014315	ENSGMOG00000024232	ENSGMOG00000014290	ENSGMOG00000027071	ENSGMOG00000014162	CHDH (ENSGMOG00000014137)	ENSGMOG00000014124	ENSGMOG00000014098	ENSGMOG00000014092	ENSGMOG00000029642	ENSGMOG00000017239	NDUFA4L2 (ENSGMOG00000016339)	ENSGMOG00000016346	NXPH4 (ENSGMOG00000020361)	ENSGMOG00000016491 #22	ENSGMOG00000022157 #22	ENSGMOG00000023496	tas1r1 (ENSGMOG00000014726)	ENSGMOG00000026897 #16	ENSGMOG00000014843 #16	her4.1 (ENSGMOG00000026079)	ENSGMOG00000014884	ENSGMOG00000015102	ENSGMOG00000034917	ENSGMOG00000015151	ENSGMOG00000015178	ppih (ENSGMOG00000015194)	ybx1 (ENSGMOG00000035560)	arhgef16 (ENSGMOG00000015237)	espn (ENSGMOG00000015276)	HES2 (ENSGMOG00000015330)
Cod	MODERN SPECIES		ENSGMOG00000028119	ENSGMOG00000014315	ENSGMOG00000024232	ENSGMOG00000014290	ENSGMOG00000027071	ENSGMOG00000014162	CHDH (ENSGMOG00000014137)	ENSGMOG00000014124	ENSGMOG00000014098	ENSGMOG00000014092	ENSGMOG00000029642	ENSGMOG00000017239	NDUFA4L2 (ENSGMOG00000016339)	ENSGMOG00000016346	NXPH4 (ENSGMOG00000020361)	ENSGMOG00000016491 #22	ENSGMOG00000022157 #22	ENSGMOG00000023496	tas1r1 (ENSGMOG00000014726)	ENSGMOG00000026897 #16	ENSGMOG00000014843 #16	her4.1 (ENSGMOG00000026079)	ENSGMOG00000014884	ENSGMOG00000015102	ENSGMOG00000034917	ENSGMOG00000015151	ENSGMOG00000015178	ppih (ENSGMOG00000015194)	ybx1 (ENSGMOG00000035560)	arhgef16 (ENSGMOG00000015237)	espn (ENSGMOG00000015276)
Cod	MODERN SPECIES		zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512)	cpne5a (ENSGMOG00000008171)	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593 #22	ENSGMOG00000028716 #22	ENSGMOG00000005884 #22	ENSGMOG00000005917 #22	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044	ENSGMOG00000006059	ENSGMOG00000006105	ENSGMOG00000006116	ENSGMOG00000006136	ENSGMOG00000006147	ENSGMOG00000027849	ENSGMOG00000003501	ENSGMOG00000031659	ENSGMOG00000003518	ENSGMOG00000003528	ENSGMOG00000003541
Osteoglossiformes	ANCESTRAL SPECIES	727															ENSGT00950000183126.a.p.a #22	ENSGT00950000183126.a.p.b #22
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	mad2l2 (ENSSFOG00015011628)	lrrc47 (ENSSFOG00015011658)	ENSSFOG00015000772 #22	ENSSFOG00015031087 #22	ENSSFOG00015000710 #22	ENSSFOG00015000660 #22	ENSSFOG00015000555 #22	ENSSFOG00015024972 #22	ENSSFOG00015031437 #22	ENSSFOG00015000621 #22	ENSSFOG00015030876 #22	ENSSFOG00015000470 #22	ENSSFOG00015030037 #22	ENSSFOG00015027206 #22	ENSSFOG00015028361 #22	ENSSFOG00015027581 #22	ENSSFOG00015000357 #22	ENSSFOG00015023334	ENSSFOG00015028593	ENSSFOG00015032331	ENSSFOG00015029004	ENSSFOG00015000103	ENSSFOG00015028686	ENSSFOG00015030683	ENSSFOG00015031584	ENSSFOG00015007420	ENSSFOG00015026948	ENSSFOG00015026400	ENSSFOG00015000208	ENSSFOG00015025968	ENSSFOG00015029436
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000781 #22	ENSSFOG00015000836 #22	ENSSFOG00015000817 #22	ENSSFOG00015027913 #22	ENSSFOG00015029704 #22	ENSSFOG00015032009 #22	ENSSFOG00015032475 #22	ENSSFOG00015028608 #22	ENSSFOG00015026294 #22	ENSSFOG00015027876	ENSSFOG00015000562 #22	ENSSFOG00015027137 #22	ENSSFOG00015030656 #22	ENSSFOG00015027408 #22	ENSSFOG00015031984	ENSSFOG00015000388 #22	ENSSFOG00015029056 #22	ENSSFOG00015029978 #22	ENSSFOG00015030214	ENSSFOG00015011544	ENSSFOG00015028546	ENSSFOG00015027077	ENSSFOG00015023535	ENSSFOG00015031739	ENSSFOG00015031901	ENSSFOG00015024991	ENSSFOG00015032979	ENSSFOG00015024723	ENSSFOG00015030654	ENSSFOG00015030335	ENSSFOG00015021340
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015029978 #22	ENSSFOG00015029056 #22	ENSSFOG00015000388 #22	ENSSFOG00015031984	ENSSFOG00015027408 #22	ENSSFOG00015030656 #22	ENSSFOG00015027137 #22	ENSSFOG00015000562 #22	ENSSFOG00015027876	ENSSFOG00015026294 #22	ENSSFOG00015028608 #22	ENSSFOG00015032475 #22	ENSSFOG00015032009 #22	ENSSFOG00015029704 #22	ENSSFOG00015027913 #22	ENSSFOG00015000817 #22	ENSSFOG00015000836 #22	ENSSFOG00015000781 #22	ENSSFOG00015000872 #22	ENSSFOG00015029663 #22	ENSSFOG00015030174 #22	ENSSFOG00015031310 #22	ENSSFOG00015003094 #22	ENSSFOG00015031314 #22	ENSSFOG00015029816 #22	ENSSFOG00015028083	prkcz (ENSSFOG00015009687)	skia (ENSSFOG00015009774) #7	ENSSFOG00015009803 #10	ENSSFOG00015009822 #17	plch2a (ENSSFOG00015009883) #14
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	37															ENSPKIG00000014581 #22	ENSPKIG00000014549 #22	ENSPKIG00000014478 #22	prkcz (ENSPKIG00000014407)	skia (ENSPKIG00000014364) #7	ENSPKIG00000014336 #17	ENSPKIG00000014315	pex10 (ENSPKIG00000014293) #12	mthfr (ENSPKIG00000014252)	CLCN6 (ENSPKIG00000014156)	ENSPKIG00000014121	ENSPKIG00000014100	nppal (ENSPKIG00000014077)	ENSPKIG00000014051	si:dkeyp-104h9.5 (ENSPKIG00000014031)	plod1a (ENSPKIG00000013959)	mfn2 (ENSPKIG00000013870)
P. kingsleyae	MODERN SPECIES	735												PLCD3 (ENSPKIG00000003226)	acbd4 (ENSPKIG00000003043)	hexim1 (ENSPKIG00000002959)	ENSPKIG00000002939 #22	ENSPKIG00000002916 #22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Spotted gar	MODERN SPECIES	664	TMEM52 (ENSLOCG00000006109)	CFAP74 (ENSLOCG00000006094)	GABRD (ENSLOCG00000006079)	ENSLOCG00000006064	ENSLOCG00000006048	ENSLOCG00000006021	NPHP4 (ENSLOCG00000005969)	dffb (ENSLOCG00000005950)	b3gnt7l (ENSLOCG00000018085)	CEP104 (ENSLOCG00000005920)	lrrc47 (ENSLOCG00000005902)	SMIM1 (ENSLOCG00000005888)	mad2l2 (ENSLOCG00000005872)	ENSLOCG00000005857	zgc:153631 (ENSLOCG00000005841) #22	ENSLOCG00000005819 #22	prkcz (ENSLOCG00000005744)	skia (ENSLOCG00000005728) #7	MORN1 (ENSLOCG00000005712) #10	si:ch211-251b21.1 (ENSLOCG00000005680) #17	plch2a (ENSLOCG00000005648) #14	pex10 (ENSLOCG00000005635) #12	mthfr (ENSLOCG00000005606)	CLCN6 (ENSLOCG00000005577)	nppb (ENSLOCG00000005558)	ENSLOCG00000005537	nppal (ENSLOCG00000005514)	ENSLOCG00000005508	si:dkeyp-104h9.5 (ENSLOCG00000005478)	plod1a (ENSLOCG00000005408)	mfn2 (ENSLOCG00000005375)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00950000183126.a.q #22
Bicolor damselfish	MODERN SPECIES	250	cacna2d2a (ENSSPAG00000006287)	abhd14b (ENSSPAG00000006268)	mst1 (ENSSPAG00000006083)	ENSSPAG00000006053	C3orf18 (ENSSPAG00000006023)	gnb1b (ENSSPAG00000005965)	tardbpb (ENSSPAG00000005946)	cenps (ENSSPAG00000005934)	rbp7b (ENSSPAG00000005924)	H6PD (ENSSPAG00000005914) #24	epha2a (ENSSPAG00000005894)	HSPB7 (ENSSPAG00000005881)	cplane2 (ENSSPAG00000005846)	ENSSPAG00000005836	ddi2 (ENSSPAG00000005793)	ENSSPAG00000005777 #22	ENSSPAG00000005761 ##22	arl8ba (ENSSPAG00000005746)	edem1 (ENSSPAG00000005711)	ENSSPAG00000005694
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1801								ENSCMIG00000012309	ENSCMIG00000012305	ENSCMIG00000012303	ENSCMIG00000012292	col2a1b (ENSCMIG00000012240)	tmem106c (ENSCMIG00000012224)	vdrb (ENSCMIG00000012222)	spryd4 (ENSCMIG00000012219)	ENSCMIG00000012215 #22	ENSCMIG00000012214	ENSCMIG00000012212	ENSCMIG00000012208	ENSCMIG00000012205	csad (ENSCMIG00000012088)	ENSCMIG00000012028	ENSCMIG00000012025	ENSCMIG00000012021
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1040																ENSCMIG00000000874 #22
Elephant shark	MODERN SPECIES	552																ENSCMIG00000001974 #22
Elephant shark	MODERN SPECIES	1668	agmat (ENSCMIG00000007826)	pink1 (ENSCMIG00000007846)	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311
Elephant shark	MODERN SPECIES	1668	pink1 (ENSCMIG00000007846)	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311	GABRD (ENSCMIG00000008313)
Elephant shark	MODERN SPECIES	1668	slc66a1 (ENSCMIG00000007870)	LACTBL1 (ENSCMIG00000007871)	ephb2b (ENSCMIG00000007877)	c1qb (ENSCMIG00000007887)	C1QB (ENSCMIG00000007888)	ENSCMIG00000007892	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000008039	ENSCMIG00000008042	ENSCMIG00000008049	ENSCMIG00000008052	ENSCMIG00000008054	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008063 #22	ENSCMIG00000008072 #22	ENSCMIG00000008073 #22	CCNL2 (ENSCMIG00000008076)	mib2 (ENSCMIG00000008094)	MMP23B (ENSCMIG00000008116)	cdk11b (ENSCMIG00000008121)	ENSCMIG00000008126	ENSCMIG00000008128	ENSCMIG00000008130	nadka (ENSCMIG00000008171)	gnb1b (ENSCMIG00000008278)	CALML6 (ENSCMIG00000008303)	TMEM52 (ENSCMIG00000008305)	ENSCMIG00000008308	ENSCMIG00000008311	GABRD (ENSCMIG00000008313)	ENSCMIG00000008317
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a ##22
Neopterygii	ANCESTRAL SPECIES	238													ENSGT00940000157473.b.a	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164	ENSGT00940000156036	ENSGT00940000159873	ENSGT00650000094956	ENSGT00940000165779
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	665	ENSLOCG00000007356 ##30	eno2 (ENSLOCG00000007366) ##28	mlf2 (ENSLOCG00000007392)	cdc42l (ENSLOCG00000007407)	wnt4b (ENSLOCG00000007422)	chd4a (ENSLOCG00000007438)	ENSLOCG00000007477	ENSLOCG00000007490	ENSLOCG00000007510	ENSLOCG00000007523	c1r (ENSLOCG00000007540)	ENSLOCG00000007576	c1s.2 (ENSLOCG00000007589)	c1s.2 (ENSLOCG00000007599)	ENSLOCG00000007609	ENSLOCG00000007631 ##22	rbp5 (ENSLOCG00000007648)	ptpn6 (ENSLOCG00000007660)	ENSLOCG00000007675	lpcat3 (ENSLOCG00000007684)	CLSTN3 (ENSLOCG00000007696)	pex5 (ENSLOCG00000007738)	ENSLOCG00000007762	gnb3a (ENSLOCG00000007772)	ENSLOCG00000007785	usp5 (ENSLOCG00000007807)	ENSLOCG00000007835	ENSLOCG00000007845	tpi1b (ENSLOCG00000007859)	cops7a (ENSLOCG00000007876)	ENSLOCG00000007900
Spotted gar	MODERN SPECIES	664	ENSLOCG00000007607	TMCO4 (ENSLOCG00000007593)	ENSLOCG00000007579	capzb (ENSLOCG00000007567)	micos10 (ENSLOCG00000007554)	NBL1 (ENSLOCG00000007543)	slc66a1 (ENSLOCG00000007530)	fbxo44.7 (ENSLOCG00000007515)	ENSLOCG00000007498	DISP3 (ENSLOCG00000007482)	ENSLOCG00000007468	cplane2 (ENSLOCG00000007458)	ENSLOCG00000007442	ARHGEF19 (ENSLOCG00000007424)	ENSLOCG00000007415	ENSLOCG00000007401 ##22	ENSLOCG00000007388	ENSLOCG00000007378	ENSLOCG00000007360	ptpn11b (ENSLOCG00000007344)	agrn (ENSLOCG00000007329) #37	ENSLOCG00000007315	her9 (ENSLOCG00000007298) #36	ENSLOCG00000007290	ENSLOCG00000007279	KLHL17 (ENSLOCG00000007252) #34	noc2l (ENSLOCG00000007227)	SAMD11 (ENSLOCG00000007210) #32	RERE (ENSLOCG00000007189) #30	eno1b (ENSLOCG00000007162) ##28	CA6 (ENSLOCG00000007130) #27
Osteoglossocephalai	ANCESTRAL SPECIES	4	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT01050000245031	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a ##28	ENSGT00940000153615.b ##30	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a	ENSGT00940000159164
Osteoglossiformes	DUPLICATION
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00950000183126.b.a.c.b ##22	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT01050000245031	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.c.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a ##28	ENSGT00940000153615.b ##30	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a	ENSGT00940000159164
P. kingsleyae	MODERN SPECIES	512													ENSPKIG00000007806	c1r (ENSPKIG00000007866)	ENSPKIG00000007923	ENSPKIG00000007959 ##22	rbp5 (ENSPKIG00000007996)	ptpn6 (ENSPKIG00000008036)	CHD4 (ENSPKIG00000008268)	wnt4b (ENSPKIG00000008637)	cdc42l (ENSPKIG00000008673)	mlf2 (ENSPKIG00000008704)	eno2 (ENSPKIG00000008754) ##28	ENSPKIG00000008809 ##30	tpi1b (ENSPKIG00000008843)	lpcat3 (ENSPKIG00000008908)	CLSTN3 (ENSPKIG00000009002)	pex5 (ENSPKIG00000009099)	ENSPKIG00000009213	gnb3a (ENSPKIG00000009251)	ENSPKIG00000009290
Asian bonytongue	MODERN SPECIES	9	nop2 (ENSSFOG00015002458)	ing4 (ENSSFOG00015028773)	ncapd2 (ENSSFOG00015002522)	nppcl (ENSSFOG00015028383)	gapdh (ENSSFOG00015002639)	opn9 (ENSSFOG00015002653)	IFFO1 (ENSSFOG00015031111)	tnfrsf1a (ENSSFOG00015026646)	ENSSFOG00015002720	ENSSFOG00015002737	mrpl51 (ENSSFOG00015002742)	vamp1b (ENSSFOG00015027800)	ENSSFOG00015002753	c1r (ENSSFOG00015002767)	ENSSFOG00015002777	ENSSFOG00015032958 ##22	rbp5 (ENSSFOG00015031066)	ptpn6 (ENSSFOG00015002824)	CHD4 (ENSSFOG00015002908)	wnt4b (ENSSFOG00015013205)	cdc42l (ENSSFOG00015025651)	mlf2 (ENSSFOG00015013255)	eno2 (ENSSFOG00015013271) ##28	ENSSFOG00015013303 ##30	tpi1b (ENSSFOG00015013354)	lpcat3 (ENSSFOG00015013390)	CLSTN3 (ENSSFOG00015013418)	pex5 (ENSSFOG00015013463)	cdca3 (ENSSFOG00015013500)	gnb3a (ENSSFOG00015013513)	P3H3 (ENSSFOG00015013557)
Osteoglossiformes	ANCESTRAL SPECIES		ENSGT00390000005023.a	ENSGT00940000153675.a.a.a.a	ENSGT00940000166118	ENSGT00940000155088.b.a.b	ENSGT00940000159480	ENSGT00940000165886	ENSGT00950000183126.b.a.c.a ##22	ENSGT00950000183084.b.a.a.b	ENSGT00950000183084.b.a.a.a	ENSGT00940000160453	ENSGT00940000164382.b.b	ENSGT00390000018821	ENSGT01050000245031	ENSGT00940000161250	ENSGT00940000159540.d	ENSGT00950000183126.b.a.c.b ##22	ENSGT00510000046803.b.a.a	ENSGT01100000263524.B.a.a	ENSGT00940000153298.i.a	ENSGT00390000015492.A	ENSGT00940000153566.a	ENSGT00940000159033	ENSGT00940000161554	ENSGT00390000000305	ENSGT00940000156745.b	ENSGT00940000154273.a	ENSGT00950000183106.a.b.b	ENSGT00940000157383.g.b	ENSGT00940000156657	ENSGT00440000033697	ENSGT00940000157871.h.a
P. kingsleyae	MODERN SPECIES	460																ENSPKIG00000025359 ##22	IFFO1 (ENSPKIG00000025355)	gapdh (ENSPKIG00000025348)	nppcl (ENSPKIG00000025346)	ncapd2 (ENSPKIG00000025333)	ing4 (ENSPKIG00000025320)	ENSPKIG00000025311	emg1 (ENSPKIG00000025303)	ENSPKIG00000025289	zyx (ENSPKIG00000025278)	ENSPKIG00000025270	FAM131B (ENSPKIG00000025259)	CLCN1 (ENSPKIG00000025201)	casp2 (ENSPKIG00000025158)	gstk1 (ENSPKIG00000025146)	styk1b (ENSPKIG00000025125)
Osteoglossiformes	ANCESTRAL SPECIES	91	ENSGT00390000005532.k	ENSGT00440000039706.m	ENSGT00940000160016	ENSGT00500000045021.c	ENSGT00940000159003	ENSGT00940000157087.a.b.kb	ENSGT00940000165103.c	ENSGT00390000010674.a	ENSGT00390000017294	ENSGT00950000182999.a	ENSGT00390000015175.b	ENSGT01030000234571.b.b.b.b	ENSGT00390000006521	ENSGT01030000234571.b.b.b.a.b	ENSGT01030000235084	ENSGT00950000183126.b.a.d ##22	ENSGT00390000009794	ENSGT00940000163259.a	ENSGT00940000153876.A.a	ENSGT00940000158337.j #37	ENSGT00940000163056.b #36	ENSGT01050000245456.b	ENSGT00940000155360.A	ENSGT00940000157635 #34	ENSGT00940000160830.a #32	ENSGT00940000153615.a.a.a.b #30	ENSGT00950000182805.a.a.a.a.a ##28	ENSGT00390000012992 #25	ENSGT00530000063435.b #24	ENSGT01030000234629.B.p #23	ENSGT00940000158954.f
P. kingsleyae	MODERN SPECIES	105	PKP1 (ENSPKIG00000001464)	ENSPKIG00000001433	ENSPKIG00000001408	cdkn1a (ENSPKIG00000001375)	tmcc2 (ENSPKIG00000001353)	usp49 (ENSPKIG00000001322)	med20 (ENSPKIG00000001295)	bysl (ENSPKIG00000001265)	CXCR3 (ENSPKIG00000001247)	ENSPKIG00000001228	ccnd3 (ENSPKIG00000001211)	ENSPKIG00000001181	cplane2 (ENSPKIG00000001159)	ARHGEF19 (ENSPKIG00000001105)	ENSPKIG00000001072	ENSPKIG00000001061 ##22	si:ch211-157b11.12 (ENSPKIG00000001047)	RNF223 (ENSPKIG00000001034)	ptpn11b (ENSPKIG00000001001)	agrn (ENSPKIG00000000815) #37	her9 (ENSPKIG00000000723) #36	ENSPKIG00000000696	ENSPKIG00000000648	KLHL17 (ENSPKIG00000000588) #34	SAMD11 (ENSPKIG00000000486) #32	RERE (ENSPKIG00000000457) #30	gpr157 (ENSPKIG00000000445) #25	H6PD (ENSPKIG00000000427) #24	pik3cd (ENSPKIG00000000372)	LDLRAD2 (ENSPKIG00000000339)	b3galt6 (ENSPKIG00000000332)
Clupeocephala	ANCESTRAL SPECIES		ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT01050000245031	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Otomorpha	ANCESTRAL SPECIES	244										ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a	ENSGT00510000048131	ENSGT00940000154244.B
Clupeiformes	ANCESTRAL SPECIES		ENSGT00940000154743.A.a.a	ENSGT00940000160219	ENSGT00390000010641.i.a	ENSGT00510000047412.a	ENSGT00940000159286.a.b.d	ENSGT01030000234586.B.a.b	ENSGT00940000158808	ENSGT00940000165838	ENSGT00390000012976	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.a	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a	ENSGT00510000048131	ENSGT00940000154244.B	ENSGT00550000075069
Denticle herring	MODERN SPECIES	15	khdc4 (ENSDCDG00000002319)	ENSDCDG00000002315	ENSDCDG00000002311	ENSDCDG00000002226	si:ch211-120k19.1 (ENSDCDG00000002219)	rpl18 (ENSDCDG00000002215)	ENSDCDG00000002211	ENSDCDG00000002208	ENSDCDG00000002204	c1s.2 (ENSDCDG00000002200)	ENSDCDG00000002196	ENSDCDG00000002194	ENSDCDG00000002161	c1r (ENSDCDG00000002111)	c1s.2 (ENSDCDG00000002101)	ENSDCDG00000002093 ##22	rbp5 (ENSDCDG00000002078)	ENSDCDG00000002073	ptpn6 (ENSDCDG00000001550)	CHD4 (ENSDCDG00000001313)	wnt4b (ENSDCDG00000001254)	cdc42l (ENSDCDG00000001244)	mlf2 (ENSDCDG00000001234)	ENO2 (ENSDCDG00000001162) ##28	ENSDCDG00000001139 ##30	rbfox1l (ENSDCDG00000001133)	rps9 (ENSDCDG00000001127)	mboat7 (ENSDCDG00000001121)	ENSDCDG00000001116	leng1 (ENSDCDG00000001104)	ENSDCDG00000001098
Otophysi	ANCESTRAL SPECIES	58													ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT00940000166290	ENSGT00940000165997.b	ENSGT00940000157871.h.a	ENSGT00440000033697	ENSGT01030000234564.a.b
Characiphysae	ANCESTRAL SPECIES	49	ENSGT00510000047412.a	ENSGT00390000010641.i.a	ENSGT00940000160219	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT01060000248708.a	ENSGT00940000154947.l	ENSGT00940000160806	ENSGT00940000157062	ENSGT00690000103873	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT00940000166290	ENSGT00940000165997.b	ENSGT00940000157871.h.a	ENSGT00440000033697	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a
Characiphysae_b	ANCESTRAL SPECIES	105	ENSGT00510000047412.a	ENSGT00390000010641.i.a	ENSGT00940000160219	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT01060000248708.a	ENSGT00940000154947.l	ENSGT00940000160806	ENSGT00940000157062	ENSGT00690000103873	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT00940000166290	ENSGT00940000165997.b	ENSGT00940000157871.h.a	ENSGT00440000033697	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a
Characoidei	ANCESTRAL SPECIES	144														ENSGT00950000183084.b.a.a.a.l.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00940000153615.b ##30	ENSGT00940000166165	ENSGT00550000074829	ENSGT00940000166290	ENSGT00940000165997.b	ENSGT00940000157871.h.a	ENSGT00440000033697	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a
Red-bellied piranha	MODERN SPECIES	573														ENSPNAG00000010807	ENSPNAG00000010813	ENSPNAG00000010824 ##22	rbp5 (ENSPNAG00000010839)	ptpn6 (ENSPNAG00000010907)	CHD4 (ENSPNAG00000011129)	wnt4b (ENSPNAG00000011153)	cdc42l (ENSPNAG00000001579)	mlf2 (ENSPNAG00000001588)	ENSPNAG00000011195	ENSPNAG00000011212 ##30	rbfox1l (ENSPNAG00000001620)	rps9 (ENSPNAG00000011249)	ENSPNAG00000011261	phc1 (ENSPNAG00000001672)	styk1b (ENSPNAG00000011350)	ENSPNAG00000001765
Mexicana tetra	MODERN SPECIES	373																ENSAMXG00000043928 ##22	rbp5 (ENSAMXG00000031812)
Electric eel	MODERN SPECIES	93			ENSEEEG00000004594	ENSEEEG00000004596	malsu1 (ENSEEEG00000004597)	khdc4 (ENSEEEG00000004598)	zbtb7b (ENSEEEG00000004599)	ENSEEEG00000004603	cyp11c1 (ENSEEEG00000004639)	clk2b (ENSEEEG00000005319)	ENSEEEG00000005333	SLC39A1 (ENSEEEG00000005349)	ENSEEEG00000005350	c1r (ENSEEEG00000005353)	c1s.1 (ENSEEEG00000005356)	ENSEEEG00000005358 ##22	rbp5 (ENSEEEG00000005359)	ptpn6 (ENSEEEG00000005368)	CHD4 (ENSEEEG00000005643)	wnt4b (ENSEEEG00000007433)	ENSEEEG00000007445	mlf2 (ENSEEEG00000007593)	rbfox1l (ENSEEEG00000007594)	ENSEEEG00000007596	rps9 (ENSEEEG00000007597)	ENSEEEG00000007602	ENSEEEG00000007603	aqp10a (ENSEEEG00000007606)	ENSEEEG00000007632	zgc:123238 (ENSEEEG00000007634)	tuft1a (ENSEEEG00000007636)
Channel catfish	MODERN SPECIES		irx4a (ENSIPUG00000000093)	LPCAT1 (ENSIPUG00000000091)	c1s.1 (ENSIPUG00000000090)	slc6a3 (ENSIPUG00000000089)	dcdc2 (ENSIPUG00000000088)	nrsn1 (ENSIPUG00000000087)	sox11-a (ENSIPUG00000000086)	ENSIPUG00000000085	cdkal1 (ENSIPUG00000000084)	ENSIPUG00000000083	ENSIPUG00000000082	ENSIPUG00000000081	ENSIPUG00000000080	e2f3 (ENSIPUG00000000079)	Mboat1 (ENSIPUG00000000078)	ENSIPUG00000000077 ##22	ENSIPUG00000000076	TMEM65 (ENSIPUG00000000075)	ENSIPUG00000000074	MTSS1 (ENSIPUG00000000073)	scgn (ENSIPUG00000000072)	CARMIL1 (ENSIPUG00000000071)	ENSIPUG00000000070	TNFRSF11B (ENSIPUG00000000069)	si:ch211-93i7.4 (ENSIPUG00000000068)	MAL2 (ENSIPUG00000000067)	CCN3 (ENSIPUG00000000066)	rbfox1l (ENSIPUG00000000065)	ENSIPUG00000000064	ENSIPUG00000000063	ENSIPUG00000000062
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a ##22
Zebrafish	MODERN SPECIES	7	ENSDARG00000062244	ENSDARG00000057143	NBEAL2 (ENSDARG00000098641)	ccdc12 (ENSDARG00000023003)	ENSDARG00000053431	ENSDARG00000037550	ENSDARG00000001760	c4b (ENSDARG00000038424)	ENSDARG00000040816	ENSDARG00000075914	ENSDARG00000073732	si:ch211-120k19.1 (ENSDARG00000075517)	rpl18 (ENSDARG00000029533)	ENSDARG00000086056	tnfrsf1a (ENSDARG00000018569)	ENSDARG00000105423 ##22	ENSDARG00000094366	IFFO1 (ENSDARG00000062108)	opn9 (ENSDARG00000104231)	gapdh (ENSDARG00000043457)	nppcl (ENSDARG00000043460)	nop2 (ENSDARG00000043304)	gtf3c6 (ENSDARG00000043301)	emg1 (ENSDARG00000056914)	ENSDARG00000076950	zyx (ENSDARG00000075733)	FAM131B (ENSDARG00000070575)	CLCN1 (ENSDARG00000012269)	casp2 (ENSDARG00000062052)	m6pr (ENSDARG00000018432)	ccdc106a (ENSDARG00000004211)
Euteleosteomorpha	ANCESTRAL SPECIES	4	ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT01050000245031	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01030000234576.D.a.b.a.a.b	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Acanthomorphata	ANCESTRAL SPECIES	9	ENSGT00940000153566.a	ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.a	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Cod	MODERN SPECIES	2	ENSGMOG00000033220	ENSGMOG00000005846	pklr (ENSGMOG00000005863)	ENSGMOG00000005891	clk2b (ENSGMOG00000005932)	ENSGMOG00000022689	ENSGMOG00000005993	ENSGMOG00000006058	ENSGMOG00000006087	ENSGMOG00000006107	ENSGMOG00000006184	ENSGMOG00000006214	ENSGMOG00000032831	c1r (ENSGMOG00000015841)	ENSGMOG00000033939	ENSGMOG00000026565 ##22	rbp5 (ENSGMOG00000015812)	ptpn6 (ENSGMOG00000015780)	ENSGMOG00000015722	wnt4b (ENSGMOG00000015702)	cdc42l (ENSGMOG00000015685)	mlf2 (ENSGMOG00000015661)	ENSGMOG00000015638 ##28	ENSGMOG00000025713 ##30	ENSGMOG00000015610	tpi1b (ENSGMOG00000015591)	lpcat3 (ENSGMOG00000015569)	ENSGMOG00000015526	pex5 (ENSGMOG00000015496)	cdca3 (ENSGMOG00000036716)	gnb3a (ENSGMOG00000015457)
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	164	zyx (ENSHCOG00000017876)	emg1 (ENSHCOG00000017870)	nop2 (ENSHCOG00000017852)	ing4 (ENSHCOG00000017838)	ncapd2 (ENSHCOG00000017819)	nppcl (ENSHCOG00000017806)	gapdh (ENSHCOG00000017735)	IFFO1 (ENSHCOG00000017700)	tnfrsf1a (ENSHCOG00000017672)	ENSHCOG00000017663	ENSHCOG00000017659	mrpl51 (ENSHCOG00000017637)	vamp1b (ENSHCOG00000017631)	ENSHCOG00000017616	ENSHCOG00000017610	ENSHCOG00000017586 ##22	rbp5 (ENSHCOG00000017577)	ptpn6 (ENSHCOG00000017567)	CHD4 (ENSHCOG00000017525)	wnt4b (ENSHCOG00000017447)	cdc42l (ENSHCOG00000017429)	mlf2 (ENSHCOG00000017416)	ENO2 (ENSHCOG00000017399) ##28	ENSHCOG00000017375 ##30	ENSHCOG00000017355	tpi1b (ENSHCOG00000017341)	lpcat3 (ENSHCOG00000017304)	CLSTN3 (ENSHCOG00000017258)	pex5 (ENSHCOG00000017218)	cdca3 (ENSHCOG00000017181)	gnb3a (ENSHCOG00000017175)
Tiger tail seahorse	MODERN SPECIES	516									rbp7b (ENSHCOG00000019989)	H6PD (ENSHCOG00000020001) #24	epha2a (ENSHCOG00000020014)	cplane2 (ENSHCOG00000020025)	ENSHCOG00000020035	ddi2 (ENSHCOG00000020065)	ENSHCOG00000000912	ENSHCOG00000000917 ##22	arl8ba (ENSHCOG00000000920)	edem1 (ENSHCOG00000000928)	gnat1 (ENSHCOG00000000934)	sema3fa (ENSHCOG00000000939)	ENSHCOG00000000945	CAMKV (ENSHCOG00000000949)	ENSHCOG00000000958	INKA2 (ENSHCOG00000000962)	KCND3 (ENSHCOG00000000042)	CTTNBP2NL (ENSHCOG00000000969)	wnt2ba (ENSHCOG00000000973)	st7l (ENSHCOG00000000984)	tox2 (ENSHCOG00000000993)	SNTA1 (ENSHCOG00000001001)	ENSHCOG00000001005
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.a	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Tetraodontidae	ANCESTRAL SPECIES	25	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a	ENSGT00940000159164
Fugu	DUPLICATION
Fugu	MODERN SPECIES	85	emg1 (ENSTRUG00000026227)	nop2 (ENSTRUG00000032033)	ing4 (ENSTRUG00000026091)	ncapd2 (ENSTRUG00000030092)	cnp-1 (ENSTRUG00000032711)	gapdh (ENSTRUG00000030301)	opn9 (ENSTRUG00000031969)	IFFO1 (ENSTRUG00000004325)	tnfrsf1a (ENSTRUG00000032740)	ENSTRUG00000028282	ENSTRUG00000029684	mrpl51 (ENSTRUG00000031945)	vamp1b (ENSTRUG00000031129)	ENSTRUG00000030832	ENSTRUG00000027094	ENSTRUG00000027348 ##22	rbp5 (ENSTRUG00000032478)
Fugu	MODERN SPECIES	19	nop2 (ENSTRUG00000002011)	ing4 (ENSTRUG00000002482)	ncapd2 (ENSTRUG00000031017)	cnp-1 (ENSTRUG00000003628)	gapdh (ENSTRUG00000003708)	opn9 (ENSTRUG00000004176)	IFFO1 (ENSTRUG00000028147)	tnfrsf1a (ENSTRUG00000004666)	ENSTRUG00000022658	ENSTRUG00000025885	mrpl51 (ENSTRUG00000025696)	vamp1b (ENSTRUG00000004770)	ENSTRUG00000022920	ENSTRUG00000020996	ENSTRUG00000004928	ENSTRUG00000006385 ##22	ENSTRUG00000026890	ENSTRUG00000028166	c1r (ENSTRUG00000032830)	ENSTRUG00000023940	rbp5 (ENSTRUG00000006431)	ptpn6 (ENSTRUG00000006647)	CHD4 (ENSTRUG00000007202)	wnt4b (ENSTRUG00000007912)	cdc42l (ENSTRUG00000027633)	mlf2 (ENSTRUG00000008461)	ENO2 (ENSTRUG00000008471) ##28	dnali1 (ENSTRUG00000008687)	ENSTRUG00000008798	ENSTRUG00000008865 ##30	ENSTRUG00000023354
Tetraodon	MODERN SPECIES	23	zyx (ENSTNIG00000008048)	emg1 (ENSTNIG00000008047)	nop2 (ENSTNIG00000008046)	ing4 (ENSTNIG00000008045)	ncapd2 (ENSTNIG00000008044)	nppcl (ENSTNIG00000008043)	gapdh (ENSTNIG00000008042)	IFFO1 (ENSTNIG00000008041)	tnfrsf1a (ENSTNIG00000008040)	ENSTNIG00000008039	mrpl51 (ENSTNIG00000008038)	vamp1b (ENSTNIG00000005766)	ENSTNIG00000008037	c1r (ENSTNIG00000008036)	ENSTNIG00000008035	ENSTNIG00000008034 ##22	rbp5 (ENSTNIG00000008033)	ptpn6 (ENSTNIG00000008032)	CHD4 (ENSTNIG00000008031)	lpcat3 (ENSTNIG00000008030)	CLSTN3 (ENSTNIG00000008029)	pex5 (ENSTNIG00000008028)	pex5 (ENSTNIG00000008027)	gnb3a (ENSTNIG00000008026)	ENSTNIG00000008025	usp5 (ENSTNIG00000008024)	ENSTNIG00000001017	cd4-1 (ENSTNIG00000001042)	usp5 (ENSTNIG00000008023)	ENSTNIG00000008022	ENSTNIG00000008021
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Ballan wrasse	MODERN SPECIES	323																ENSLBEG00000012563 ##22	rbp5 (ENSLBEG00000012595)	ptpn6 (ENSLBEG00000012502)	CHD4 (ENSLBEG00000012434)	wnt4b (ENSLBEG00000012397)	ENSLBEG00000012371	mlf2 (ENSLBEG00000012308)	ENO2 (ENSLBEG00000012256) ##28	ENSLBEG00000012218 ##30	ENSLBEG00000012197	tpi1b (ENSLBEG00000012174)	lpcat3 (ENSLBEG00000012097)	CLSTN3 (ENSLBEG00000012015)	pex5 (ENSLBEG00000011713)	cdca3 (ENSLBEG00000011614)	gnb3a (ENSLBEG00000011589)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a.f.b	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Lumpfish	MODERN SPECIES	7	nop2 (ENSCLMG00005001738)	ing4 (ENSCLMG00005002494)	ncapd2 (ENSCLMG00005002517)	nppcl (ENSCLMG00005002536)	gapdh (ENSCLMG00005002539)	opn9 (ENSCLMG00005002636)	IFFO1 (ENSCLMG00005002640)	tnfrsf1a (ENSCLMG00005002643)	ENSCLMG00005002644	ENSCLMG00005002647	mrpl51 (ENSCLMG00005002648)	vamp1b (ENSCLMG00005002652)	ENSCLMG00005002654	c1r (ENSCLMG00005002655)	ENSCLMG00005002657	ENSCLMG00005002660 ##22	rbp5 (ENSCLMG00005002661)	ptpn6 (ENSCLMG00005002665)	CHD4 (ENSCLMG00005002733)	wnt4b (ENSCLMG00005006421)	cdc42l (ENSCLMG00005006422)	mlf2 (ENSCLMG00005006426)	ENO2 (ENSCLMG00005006430) ##28	ENSCLMG00005006470	tpi1b (ENSCLMG00005006471)	lpcat3 (ENSCLMG00005006474)	CLSTN3 (ENSCLMG00005006477)	pex5 (ENSCLMG00005006479)	cdca3 (ENSCLMG00005006508)	gnb3a (ENSCLMG00005006510)	P3H3 (ENSCLMG00005006511)
Stickleback	MODERN SPECIES	19	zyx (ENSGACG00000010340)	emg1 (ENSGACG00000010330)	nop2 (ENSGACG00000010317)	ncapd2 (ENSGACG00000010292)	nppcl (ENSGACG00000010291)	gapdh (ENSGACG00000010219)	opn9 (ENSGACG00000010215)	ENSGACG00000010213	IFFO1 (ENSGACG00000010207)	tnfrsf1a (ENSGACG00000010200)	ENSGACG00000010195	mrpl51 (ENSGACG00000010193)	vamp1b (ENSGACG00000010179)	ENSGACG00000010169	c1r (ENSGACG00000010132)	ENSGACG00000010128 ##22	rbp5 (ENSGACG00000010125)	ptpn6 (ENSGACG00000010111)	CHD4 (ENSGACG00000010099)	wnt4b (ENSGACG00000010089)	cdc42l (ENSGACG00000010059)	mlf2 (ENSGACG00000010056)	ENO2 (ENSGACG00000010016) ##28	ENSGACG00000010011 ##30	ENSGACG00000010009	tpi1b (ENSGACG00000009950)	lpcat3 (ENSGACG00000009917)	CLSTN3 (ENSGACG00000009910)	pex5 (ENSGACG00000009907)	ENSGACG00000009904	gnb3a (ENSGACG00000009868)
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT01000000221290	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263505.b.b.b.a.b.b	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Pike perch	MODERN SPECIES	15	nop2 (ENSSLUG00000009873)	ing4 (ENSSLUG00000010189)	ncapd2 (ENSSLUG00000010221)	nppcl (ENSSLUG00000010931)	gapdh (ENSSLUG00000010963)	opn9 (ENSSLUG00000012270)	IFFO1 (ENSSLUG00000012278)	tnfrsf1a (ENSSLUG00000012284)	ENSSLUG00000012291	ENSSLUG00000012295	mrpl51 (ENSSLUG00000012300)	vamp1b (ENSSLUG00000012307)	ENSSLUG00000012309	c1r (ENSSLUG00000012329)	ENSSLUG00000012394	ENSSLUG00000012402 ##22	rbp5 (ENSSLUG00000012411)	ptpn6 (ENSSLUG00000012474)	CHD4 (ENSSLUG00000014277)	wnt4b (ENSSLUG00000023205)	cdc42l (ENSSLUG00000023214)	mlf2 (ENSSLUG00000023222)	ENO2 (ENSSLUG00000023248) ##28	ENSSLUG00000023338 ##30	ENSSLUG00000023344	tpi1b (ENSSLUG00000023351)	lpcat3 (ENSSLUG00000023370)	CLSTN3 (ENSSLUG00000023429)	pex5 (ENSSLUG00000023646)	cdca3 (ENSSLUG00000023876)	gnb3a (ENSSLUG00000023879)
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000007982	ENSCGOG00000007984	casp2 (ENSCGOG00000007987)	FAM131B (ENSCGOG00000007997)	zyx (ENSCGOG00000008004)	ENSCGOG00000008008	ENSCGOG00000008019	emg1 (ENSCGOG00000008021)	nop2 (ENSCGOG00000008032)	ing4 (ENSCGOG00000008180)	ncapd2 (ENSCGOG00000008211)	nppcl (ENSCGOG00000008532)	gapdh (ENSCGOG00000001626)	ENSCGOG00000001801	ENSCGOG00000001804	ENSCGOG00000001810 ##22	rbp5 (ENSCGOG00000001814)	ptpn6 (ENSCGOG00000001844)	ENSCGOG00000002434	CHD4 (ENSCGOG00000002438)	wnt4b (ENSCGOG00000002447)	cdc42l (ENSCGOG00000002487)	mlf2 (ENSCGOG00000002581)	ENO2 (ENSCGOG00000002584) ##28	ENO2 (ENSCGOG00000002611) ##28	ENSCGOG00000002613	CHD4 (ENSCGOG00000002674)	wnt4b (ENSCGOG00000002888)	mlf2 (ENSCGOG00000002917)	usp5 (ENSCGOG00000002951)	ENSCGOG00000003584
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a.f.b	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Gilthead seabream	MODERN SPECIES	8	opn9 (ENSSAUG00010016573)	IFFO1 (ENSSAUG00010016577)	tnfrsf1a (ENSSAUG00010016590)	ENSSAUG00010016595	ENSSAUG00010016597	mrpl51 (ENSSAUG00010016600)	vamp1b (ENSSAUG00010016603)	ENSSAUG00010016608	c1r (ENSSAUG00010016612)	c1r (ENSSAUG00010016621)	ENSSAUG00010016635	c1r (ENSSAUG00010016637)	ENSSAUG00010016641	ENSSAUG00010016642	ENSSAUG00010016643	ENSSAUG00010016645 ##22	rbp5 (ENSSAUG00010016646)	ptpn6 (ENSSAUG00010016649)	CHD4 (ENSSAUG00010016793)	wnt4b (ENSSAUG00010024162)	cdc42l (ENSSAUG00010024165)	mlf2 (ENSSAUG00010024166)	ENO2 (ENSSAUG00010024168) ##28	ENSSAUG00010024210 ##30	ENSSAUG00010024211	tpi1b (ENSSAUG00010024213)	lpcat3 (ENSSAUG00010024215)	CLSTN3 (ENSSAUG00010024228)	pex5 (ENSSAUG00010024691)	cdca3 (ENSSAUG00010025094)	gnb3a (ENSSAUG00010025099)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a.f.b	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
European seabass	DUPLICATION
European seabass	MODERN SPECIES	6	ENSDLAG00005027607	ENSDLAG00005000454	ENSDLAG00005000438	ENSDLAG00005000362	nppcl (ENSDLAG00005000338)	gapdh (ENSDLAG00005000264)	opn9 (ENSDLAG00005000197)	ENSDLAG00005033949	tnfrsf1a (ENSDLAG00005000170)	ENSDLAG00005000159	ENSDLAG00005000147	ENSDLAG00005031484	ENSDLAG00005000119	ENSDLAG00005012350	ENSDLAG00005034042	ENSDLAG00005034647 ##22	c1r (ENSDLAG00005027182)	ptpn6 (ENSDLAG00005011202)	ENSDLAG00005009374	wnt4b (ENSDLAG00005009297)	cdc42l (ENSDLAG00005028019)	mlf2 (ENSDLAG00005009272)	ENSDLAG00005008682 ##28	ENSDLAG00005008641 ##30	ENSDLAG00005008630	tpi1b (ENSDLAG00005008552)	lpcat3 (ENSDLAG00005008443)	ENSDLAG00005006886	pex5 (ENSDLAG00005006787)	cdca3 (ENSDLAG00005006780)	gnb3a (ENSDLAG00005006773)
European seabass	MODERN SPECIES	10	cacna2d2a (ENSDLAG00005026435)	abhd14b (ENSDLAG00005000777)	ENSDLAG00005000543	ENSDLAG00005000529	mst1 (ENSDLAG00005034125)	ENSDLAG00005000514	ENSDLAG00005000478	tardbpb (ENSDLAG00005026474)	ENSDLAG00005027797 #24	epha2a (ENSDLAG00005025034)	ENSDLAG00005025016	ENSDLAG00005025012	ENSDLAG00005025006	ENSDLAG00005024995	ENSDLAG00005024990	ENSDLAG00005024987 ##22	arl8ba (ENSDLAG00005024984)	edem1 (ENSDLAG00005024904)	gnat1 (ENSDLAG00005024893)	sema3fa (ENSDLAG00005024677)	ENSDLAG00005024621	CAMKV (ENSDLAG00005031446)	ENSDLAG00005024585	ENSDLAG00005023600	inka1b (ENSDLAG00005023507)	gnai2b (ENSDLAG00005023497)	ENSDLAG00005023398	rbm5 (ENSDLAG00005023234)	GPX (ENSDLAG00005029761)	TEX264 (ENSDLAG00005023215)	grm2b (ENSDLAG00005023208)
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	488	acbd4 (ENSLCRG00005013872)	ARHGAP23 (ENSLCRG00005013846)	ENSLCRG00005013845	ENSLCRG00005013844	ENSLCRG00005013843	ENSLCRG00005013842	tmem26b (ENSLCRG00005013841)	ENSLCRG00005013839	ENSLCRG00005013836	FMN2 (ENSLCRG00005013833)	CHRM3 (ENSLCRG00005013830)	ENSLCRG00005013827	c1r (ENSLCRG00005013822)	c1r (ENSLCRG00005013813)	ENSLCRG00005013802	ENSLCRG00005013796 ##22	rbp5 (ENSLCRG00005013791)	ptpn6 (ENSLCRG00005012873)	CHD4 (ENSLCRG00005006516)	wnt4b (ENSLCRG00005006467)	cdc42l (ENSLCRG00005006465)	mlf2 (ENSLCRG00005006464)	ENO2 (ENSLCRG00005006301) ##28	ENSLCRG00005020033 ##30	ENSLCRG00005020032	tpi1b (ENSLCRG00005020027)	lpcat3 (ENSLCRG00005020021)	CLSTN3 (ENSLCRG00005019795)	pex5 (ENSLCRG00005019283)	cdca3 (ENSLCRG00005019275)	gnb3a (ENSLCRG00005019274)
Large yellow croaker	MODERN SPECIES	478	abhd14b (ENSLCRG00005020841)	mst1 (ENSLCRG00005020717)	ENSLCRG00005020712	C3orf18 (ENSLCRG00005020711)	CALML6 (ENSLCRG00005020710)	gnb1b (ENSLCRG00005020705)	tardbpb (ENSLCRG00005020689)	cenps (ENSLCRG00005020687)	rbp7b (ENSLCRG00005020686)	H6PD (ENSLCRG00005020684) #24	epha2a (ENSLCRG00005020673)	cplane2 (ENSLCRG00005020663)	ENSLCRG00005020661	ddi2 (ENSLCRG00005020659)	ENSLCRG00005020657	ENSLCRG00005020656 ##22	arl8ba (ENSLCRG00005020654)	edem1 (ENSLCRG00005020636)	gnat1 (ENSLCRG00005020633)	sema3fa (ENSLCRG00005019638)	ENSLCRG00005019589	CAMKV (ENSLCRG00005019566)	ENSLCRG00005019554	ENSLCRG00005018557	inka1b (ENSLCRG00005018545)	gnai2b (ENSLCRG00005018542)	SLC38A3 (ENSLCRG00005018205)	rbm5 (ENSLCRG00005017779)	BRK1 (ENSLCRG00005017774)	GPX1 (ENSLCRG00005017773)	TEX264 (ENSLCRG00005017771)
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Carangaria	ANCESTRAL SPECIES	1	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00940000176033	ENSGT01000000214413.b.a.b.a.a
Turbot	DUPLICATION
Turbot	MODERN SPECIES		ENSSMAG00000011806	ENSSMAG00000011738	ENSSMAG00000011718	ENSSMAG00000011611	nppcl (ENSSMAG00000011599)	gapdh (ENSSMAG00000011551)	ENSSMAG00000011533	tnfrsf1a (ENSSMAG00000029921)	ENSSMAG00000011489	ENSSMAG00000011505	ENSSMAG00000011479	ENSSMAG00000011452	ENSSMAG00000011433	c1r (ENSSMAG00000011398)	ENSSMAG00000011384	ENSSMAG00000011373 ##22	rbp5 (ENSSMAG00000011365)	ptpn6 (ENSSMAG00000011269)	ENSSMAG00000010969	wnt4b (ENSSMAG00000010935)	cdc42l (ENSSMAG00000010911)	mlf2 (ENSSMAG00000031916)	ENSSMAG00000010850 ##28	ENSSMAG00000010829 ##30	ENSSMAG00000010821	tpi1b (ENSSMAG00000010806)	lpcat3 (ENSSMAG00000010753)	ENSSMAG00000010644	pex5 (ENSSMAG00000010517)	ENSSMAG00000023441	gnb3a (ENSSMAG00000010465)
Turbot	MODERN SPECIES	18	abhd14b (ENSSMAG00000016248)	ENSSMAG00000016276	ENSSMAG00000016285	ENSSMAG00000016301	gnb1b (ENSSMAG00000016341)	tardbpb (ENSSMAG00000016401)	cenps (ENSSMAG00000016450)	rbp7b (ENSSMAG00000016482)	ENSSMAG00000016493 #24	epha2a (ENSSMAG00000016512)	ENSSMAG00000016586	ENSSMAG00000016621	ENSSMAG00000016650	ENSSMAG00000016663	ENSSMAG00000016714	ENSSMAG00000016726 ##22	arl8ba (ENSSMAG00000015130)	edem1 (ENSSMAG00000016753)	gnat1 (ENSSMAG00000016780)	sema3fa (ENSSMAG00000016804)	ENSSMAG00000016859	ENSSMAG00000016893	ENSSMAG00000016930	ENSSMAG00000016945	inka1b (ENSSMAG00000028258)	gnai2b (ENSSMAG00000016985)	ENSSMAG00000017026	rbm5 (ENSSMAG00000017106)	ENSSMAG00000022009	ENSSMAG00000017138	TEX264 (ENSSMAG00000017157)
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Seriola	ANCESTRAL SPECIES	28	ENSGT00390000000305	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Greater amberjack	MODERN SPECIES	88	ENSSDUG00000011360	ing4 (ENSSDUG00000011444)	ncapd2 (ENSSDUG00000011470)	nppcl (ENSSDUG00000011571)	gapdh (ENSSDUG00000011613)	opn9 (ENSSDUG00000011638)	IFFO1 (ENSSDUG00000011662)	tnfrsf1a (ENSSDUG00000011676)	ENSSDUG00000011699	ENSSDUG00000011758	mrpl51 (ENSSDUG00000011778)	vamp1b (ENSSDUG00000011784)	ENSSDUG00000011795	c1r (ENSSDUG00000011807)	ENSSDUG00000011894	ENSSDUG00000011920 ##22	rbp5 (ENSSDUG00000011941)	ptpn6 (ENSSDUG00000011963)	CHD4 (ENSSDUG00000012051)	wnt4b (ENSSDUG00000012919)	cdc42l (ENSSDUG00000012950)	mlf2 (ENSSDUG00000012972)	ENO2 (ENSSDUG00000013007) ##28	ENSSDUG00000013033 ##30	ENSSDUG00000013057	tpi1b (ENSSDUG00000013070)	lpcat3 (ENSSDUG00000013113)	CLSTN3 (ENSSDUG00000013183)	pex5 (ENSSDUG00000013227)	cdca3 (ENSSDUG00000013300)	gnb3a (ENSSDUG00000013312)
Yellowtail amberjack	MODERN SPECIES	3126	ENSSLDG00000023452	ing4 (ENSSLDG00000023463)	ncapd2 (ENSSLDG00000023476)	nppcl (ENSSLDG00000023511)	gapdh (ENSSLDG00000023514)	opn9 (ENSSLDG00000023539)	IFFO1 (ENSSLDG00000023563)	tnfrsf1a (ENSSLDG00000023603)	ENSSLDG00000023616	ENSSLDG00000023628	mrpl51 (ENSSLDG00000023639)	vamp1b (ENSSLDG00000023642)	ENSSLDG00000023650	c1r (ENSSLDG00000023710)	ENSSLDG00000023748	ENSSLDG00000023763 ##22	rbp5 (ENSSLDG00000023776)	ptpn6 (ENSSLDG00000023788)	CHD4 (ENSSLDG00000023821)	wnt4b (ENSSLDG00000023860)	cdc42l (ENSSLDG00000023872)	mlf2 (ENSSLDG00000023881)	ENO2 (ENSSLDG00000023899) ##28	ENSSLDG00000023931 ##30	ENSSLDG00000023938	tpi1b (ENSSLDG00000023943)	lpcat3 (ENSSLDG00000023964)	CLSTN3 (ENSSLDG00000023986)	pex5 (ENSSLDG00000024064)	cdca3 (ENSSLDG00000024138)	gnb3a (ENSSLDG00000024115)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	161														ENSLCAG00010007697	ENSLCAG00010007677	ENSLCAG00010007669 ##22	rbp5 (ENSLCAG00010007659)	ptpn6 (ENSLCAG00010007146)	ENSLCAG00010007000	CHD4 (ENSLCAG00010005550)	wnt4b (ENSLCAG00010005266)	cdc42l (ENSLCAG00010005257)	mlf2 (ENSLCAG00010005249)	ENO2 (ENSLCAG00010005210) ##28	ENSLCAG00010005191 ##30	tpi1b (ENSLCAG00010005177)	lpcat3 (ENSLCAG00010005166)	CLSTN3 (ENSLCAG00010004863)	pex5 (ENSLCAG00010004688)	cdca3 (ENSLCAG00010004658)	gnb3a (ENSLCAG00010004656)
Barramundi perch	MODERN SPECIES	372							rbp7b (ENSLCAG00010007609)	H6PD (ENSLCAG00010007612) #24	epha2a (ENSLCAG00010007628)	ENSLCAG00010007654	HSPB7 (ENSLCAG00010007662)	cplane2 (ENSLCAG00010007665)	ddi2 (ENSLCAG00010007675)	ENSLCAG00010007684	ENSLCAG00010007687	ENSLCAG00010007692 ##22	arl8ba (ENSLCAG00010007696)	edem1 (ENSLCAG00010007707)	gnat1 (ENSLCAG00010007761)	sema3fa (ENSLCAG00010007819)	ENSLCAG00010008019	CAMKV (ENSLCAG00010008040)	ENSLCAG00010008147	ENSLCAG00010008488	inka1b (ENSLCAG00010008494)	gnai2b (ENSLCAG00010008496)	SLC38A3 (ENSLCAG00010008605)	rbm5 (ENSLCAG00010008977)	BRK1 (ENSLCAG00010008988)	ENSLCAG00010008992	ENSLCAG00010008994
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000001864	ENSMAMG00000001888	ENSMAMG00000001909	ENSMAMG00000001932	ENSMAMG00000001947	ENSMAMG00000026561	ENSMAMG00000028123	ENSMAMG00000002202	ENSMAMG00000002253	ENSMAMG00000002274	MRPL51 (ENSMAMG00000002286)	ENSMAMG00000002303	ENSMAMG00000002334	c1r (ENSMAMG00000002356)	ENSMAMG00000002472	ENSMAMG00000002491 ##22	rbp5 (ENSMAMG00000002514)	ptpn6 (ENSMAMG00000002533)	ENSMAMG00000002584	wnt4b (ENSMAMG00000002724)	cdc42l (ENSMAMG00000002744)	mlf2 (ENSMAMG00000002770)	ENSMAMG00000002818 ##28	ENSMAMG00000002878 ##30	ENSMAMG00000025691	tpi1b (ENSMAMG00000027825)	lpcat3 (ENSMAMG00000002993)	ENSMAMG00000003054	pex5 (ENSMAMG00000003113)	cdca3 (ENSMAMG00000003257)	gnb3a (ENSMAMG00000003267)
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b	ENSGT00940000157473.b.a	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Climbing perch	MODERN SPECIES	7	ENSATEG00000021620	ENSATEG00000021597	nppcl (ENSATEG00000028362)	gapdh (ENSATEG00000021562)	ENSATEG00000021534	tnfrsf1a (ENSATEG00000021520)	ENSATEG00000021502	ENSATEG00000021485	ENSATEG00000021472	ENSATEG00000021461	ENSATEG00000021453	ENSATEG00000021426	ENSATEG00000021386	c1s.2 (ENSATEG00000021318)	ENSATEG00000021298	ENSATEG00000027269 ##22	rbp5 (ENSATEG00000021284)	ptpn6 (ENSATEG00000021186)	ENSATEG00000021141	wnt4b (ENSATEG00000021124)	cdc42l (ENSATEG00000021106)	mlf2 (ENSATEG00000021098)	ENSATEG00000021080 ##28	ENSATEG00000021065 ##30	ENSATEG00000021056	tpi1b (ENSATEG00000021044)	lpcat3 (ENSATEG00000021022)	ENSATEG00000020993	pex5 (ENSATEG00000020954)	cdca3 (ENSATEG00000020942)	gnb3a (ENSATEG00000020921)
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	7	ENSBSLG00000022442	ENSBSLG00000022405	ENSBSLG00000022339	ENSBSLG00000021788	nppcl (ENSBSLG00000021693)	gapdh (ENSBSLG00000021486)	IFFO1 (ENSBSLG00000021449)	tnfrsf1a (ENSBSLG00000021384)	ENSBSLG00000021365	ENSBSLG00000021313	mrpl51 (ENSBSLG00000021301)	vamp1b (ENSBSLG00000021283)	ENSBSLG00000021256	c1r (ENSBSLG00000021166)	ENSBSLG00000021142	ENSBSLG00000021088 ##22	rbp5 (ENSBSLG00000020986)	ptpn6 (ENSBSLG00000020434)	CHD4 (ENSBSLG00000014755)	wnt4b (ENSBSLG00000014501)	cdc42l (ENSBSLG00000014473)	mlf2 (ENSBSLG00000014457)	ENO2 (ENSBSLG00000014219) ##28	ENSBSLG00000014172 ##30	ENSBSLG00000014156	tpi1b (ENSBSLG00000014028)	lpcat3 (ENSBSLG00000014007)	CLSTN3 (ENSBSLG00000013359)	pex5 (ENSBSLG00000012592)	cdca3 (ENSBSLG00000012554)	gnb3a (ENSBSLG00000012548)
Siamese fighting fish	MODERN SPECIES	16	mst1 (ENSBSLG00000018942)	ENSBSLG00000018906	C3orf18 (ENSBSLG00000018894)	CALML6 (ENSBSLG00000018853)	gnb1b (ENSBSLG00000018770)	tardbpb (ENSBSLG00000018652)	rbp7b (ENSBSLG00000018527)	H6PD (ENSBSLG00000018514) #24	epha2a (ENSBSLG00000018367)	ENSBSLG00000018349	cplane2 (ENSBSLG00000018290)	ENSBSLG00000018214	ENSBSLG00000018167	ddi2 (ENSBSLG00000018020)	ENSBSLG00000018008	ENSBSLG00000018001 ##22	arl8ba (ENSBSLG00000017990)	edem1 (ENSBSLG00000017821)	gnat1 (ENSBSLG00000017734)	sema3fa (ENSBSLG00000016994)	ENSBSLG00000016799	CAMKV (ENSBSLG00000016624)	ENSBSLG00000015930	ENSBSLG00000015381	inka1b (ENSBSLG00000015333)	gnai2b (ENSBSLG00000015177)	SLC38A3 (ENSBSLG00000014576)	rbm5 (ENSBSLG00000014358)	BRK1 (ENSBSLG00000014331)	ENSBSLG00000014321	TEX264 (ENSBSLG00000014251)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Burton s mouthbrooder	MODERN SPECIES	338	nop2 (ENSHBUG00000014908)	ing4 (ENSHBUG00000014922)	ncapd2 (ENSHBUG00000015269)	nppcl (ENSHBUG00000015288)	gapdh (ENSHBUG00000015326)	IFFO1 (ENSHBUG00000015385)	tnfrsf1a (ENSHBUG00000015452)	ENSHBUG00000015475	ENSHBUG00000015487	mrpl51 (ENSHBUG00000015507)	vamp1b (ENSHBUG00000015513)	ENSHBUG00000015520	c1r (ENSHBUG00000015714)	c1r (ENSHBUG00000015759)	ENSHBUG00000015777	ENSHBUG00000000461 ##22	rbp5 (ENSHBUG00000015787)	ptpn6 (ENSHBUG00000015887)	CHD4 (ENSHBUG00000016000)	wnt4b (ENSHBUG00000016023)	cdc42l (ENSHBUG00000016055)	mlf2 (ENSHBUG00000016101)	ENO2 (ENSHBUG00000016184) ##28	ENSHBUG00000016194 ##30	ENSHBUG00000016202	tpi1b (ENSHBUG00000016207)	tpi1b (ENSHBUG00000016256)	lpcat3 (ENSHBUG00000016290)	CLSTN3 (ENSHBUG00000016357)	pex5 (ENSHBUG00000016380)	cdca3 (ENSHBUG00000016398)
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.a	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886.a	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.c.b	ENSGT00390000013354.b.a.c.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Eastern happy	MODERN SPECIES	2	ENSACLG00000023702	ing4 (ENSACLG00000023713)	ncapd2 (ENSACLG00000023758)	nppcl (ENSACLG00000024000)	gapdh (ENSACLG00000024004)	IFFO1 (ENSACLG00000024040)	tnfrsf1a (ENSACLG00000024260)	ENSACLG00000024268	ENSACLG00000024272	mrpl51 (ENSACLG00000024277)	vamp1b (ENSACLG00000024283)	ENSACLG00000024298	c1r (ENSACLG00000024311)	c1r (ENSACLG00000024323)	ENSACLG00000024330	ENSACLG00000024367 ##22	rbp5 (ENSACLG00000024378)	ptpn6 (ENSACLG00000024401)	CHD4 (ENSACLG00000024468)	wnt4b (ENSACLG00000024555)	cdc42l (ENSACLG00000024575)	mlf2 (ENSACLG00000024596)	ENO2 (ENSACLG00000024650) ##28	ENSACLG00000024672 ##30	ENSACLG00000024699	tpi1b (ENSACLG00000024702)	tpi1b (ENSACLG00000024729)	lpcat3 (ENSACLG00000024914)	CLSTN3 (ENSACLG00000024926)	pex5 (ENSACLG00000024943)	cdca3 (ENSACLG00000024964)
Zebra mbuna	MODERN SPECIES	1093	nop2 (ENSMZEG00005017552)	ing4 (ENSMZEG00005017575)	ncapd2 (ENSMZEG00005017584)	nppcl (ENSMZEG00005017599)	gapdh (ENSMZEG00005017606)	IFFO1 (ENSMZEG00005017621)	tnfrsf1a (ENSMZEG00005017631)	ENSMZEG00005017640	ENSMZEG00005017646	mrpl51 (ENSMZEG00005017651)	vamp1b (ENSMZEG00005017659)	ENSMZEG00005017663	c1r (ENSMZEG00005017676)	ENSMZEG00005017699	ENSMZEG00005017721	ENSMZEG00005017724 ##22	rbp5 (ENSMZEG00005017730)	ptpn6 (ENSMZEG00005017741)	CHD4 (ENSMZEG00005017761)	wnt4b (ENSMZEG00005017768)	cdc42l (ENSMZEG00005017771)	mlf2 (ENSMZEG00005017776)	ENO2 (ENSMZEG00005017787) ##28	ENSMZEG00005017798 ##30	ENSMZEG00005017802	tpi1b (ENSMZEG00005017807)	tpi1b (ENSMZEG00005017813)	lpcat3 (ENSMZEG00005017817)	ENSMZEG00005017824	pex5 (ENSMZEG00005017839)	cdca3 (ENSMZEG00005017855)
P. nyererei	MODERN SPECIES	340	ENSPNYG00000023168	nop2 (ENSPNYG00000023163)	ing4 (ENSPNYG00000023159)	ncapd2 (ENSPNYG00000023147)	nppcl (ENSPNYG00000023137)	gapdh (ENSPNYG00000023126)	IFFO1 (ENSPNYG00000023118)	tnfrsf1a (ENSPNYG00000023108)	ENSPNYG00000023100	mrpl51 (ENSPNYG00000023096)	vamp1b (ENSPNYG00000023090)	ENSPNYG00000023086	ENSPNYG00000023081	c1r (ENSPNYG00000023071)	ENSPNYG00000023063	ENSPNYG00000023058 ##22	rbp5 (ENSPNYG00000023055)	ptpn6 (ENSPNYG00000023046)	CHD4 (ENSPNYG00000023020)	wnt4b (ENSPNYG00000023006)	cdc42l (ENSPNYG00000023002)	mlf2 (ENSPNYG00000022996)	ENO2 (ENSPNYG00000022988) ##28	ENSPNYG00000022982 ##30	ENSPNYG00000022976	tpi1b (ENSPNYG00000022968)	lpcat3 (ENSPNYG00000022959)	CLSTN3 (ENSPNYG00000022943)	pex5 (ENSPNYG00000022906)	cdca3 (ENSPNYG00000022897)	ENSPNYG00000022893
Nile tilapia	MODERN SPECIES	2	ing4 (ENSONIG00000012899)	ncapd2 (ENSONIG00000012903)	nppcl (ENSONIG00000039427)	gapdh (ENSONIG00000012916)	ENSONIG00000031664	IFFO1 (ENSONIG00000012923)	tnfrsf1a (ENSONIG00000012925)	ENSONIG00000036169	ENSONIG00000012927	mrpl51 (ENSONIG00000041702)	vamp1b (ENSONIG00000035965)	ENSONIG00000012935	c1r (ENSONIG00000039055)	c1r (ENSONIG00000012936)	ENSONIG00000042930	ENSONIG00000012947 ##22	rbp5 (ENSONIG00000012948)	ptpn6 (ENSONIG00000012950)	CHD4 (ENSONIG00000012953)	wnt4b (ENSONIG00000012962)	cdc42l (ENSONIG00000029398)	mlf2 (ENSONIG00000034709)	ENO2 (ENSONIG00000012968) ##28	ENSONIG00000035395 ##30	ENSONIG00000033036	tpi1b (ENSONIG00000012975)	lpcat3 (ENSONIG00000012981)	CLSTN3 (ENSONIG00000012983)	pex5 (ENSONIG00000012992)	cdca3 (ENSONIG00000012999)	gnb3a (ENSONIG00000013000)
Pomacentridae	ANCESTRAL SPECIES	50	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000159249.a	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01030000234576.D.a.b.a.a.b.f	ENSGT00390000013354.b.a.c.b	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.d	ENSGT01030000234564.b	ENSGT00950000183086.a.b
Pomacentridae_A	ANCESTRAL SPECIES	44	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01030000234576.D.a.b.a.a.b.f	ENSGT00390000013354.b.a.c.b	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a.d	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605
Amphiprion	ANCESTRAL SPECIES	157													ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01030000234576.D.a.b.a.a.b.f	ENSGT00390000013354.b.a.d	ENSGT00390000013354.b.a.c.b	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Orange clownfish	MODERN SPECIES	21	si:ch211-120k19.1 (ENSAPEG00000006884)	ENSAPEG00000006865	ENSAPEG00000006861	rpl18 (ENSAPEG00000006834)	ENSAPEG00000006824	ENSAPEG00000006818	CYTH2 (ENSAPEG00000006766)	ENSAPEG00000006753	zgc:158689 (ENSAPEG00000006734)	ndufa3 (ENSAPEG00000006697)	tfpt (ENSAPEG00000006670)	cnot3a (ENSAPEG00000006624)	ENSAPEG00000006589	c1r (ENSAPEG00000006532)	ENSAPEG00000006512	ENSAPEG00000006501 ##22	rbp5 (ENSAPEG00000006480)	ptpn6 (ENSAPEG00000006402)	ENSAPEG00000005957	wnt4b (ENSAPEG00000005846)	cdc42l (ENSAPEG00000005817)	mlf2 (ENSAPEG00000005772)	ENO2 (ENSAPEG00000005734) ##28	ENSAPEG00000005715 ##30	ENSAPEG00000005705	tpi1b (ENSAPEG00000005659)	lpcat3 (ENSAPEG00000005532)	CLSTN3 (ENSAPEG00000005470)	pex5 (ENSAPEG00000005324)	cdca3 (ENSAPEG00000005280)	gnb3a (ENSAPEG00000005255)
Clown anemonefish	MODERN SPECIES	3062														ENSAOCG00000017987	c1r (ENSAOCG00000018029)	ENSAOCG00000018045 ##22	ENSAOCG00000018076	rbp5 (ENSAOCG00000018086)
Spiny chromis	MODERN SPECIES	1538														ENSAPOG00000013342	ENSAPOG00000013439	ENSAPOG00000013459 ##22	rbp5 (ENSAPOG00000013494)	ENSAPOG00000013528	ENSAPOG00000013553	ENSAPOG00000013573	ENSAPOG00000013598	wnt4b (ENSAPOG00000013630)	cdc42l (ENSAPOG00000013663)	mlf2 (ENSAPOG00000013696)	ENO2 (ENSAPOG00000013757) ##28	ENSAPOG00000013769	tpi1b (ENSAPOG00000013800)	lpcat3 (ENSAPOG00000013866)
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	420													ENSSPAG00000003857	c1r (ENSSPAG00000003873)	ENSSPAG00000003898	ENSSPAG00000003936 ##22	rbp5 (ENSSPAG00000003950)	ptpn6 (ENSSPAG00000003979)	ENSSPAG00000004067	ENSSPAG00000004090	ENSSPAG00000004124	wnt4b (ENSSPAG00000004155)	mlf2 (ENSSPAG00000004181)	ENO2 (ENSSPAG00000004214) ##28	tpi1b (ENSSPAG00000004241)	ENSSPAG00000004266	lpcat3 (ENSSPAG00000004287)	CLSTN3 (ENSSPAG00000004312)	pex5 (ENSSPAG00000004384)	cdca3 (ENSSPAG00000004479)	cyp1b1 (ENSSPAG00000004496)
Bicolor damselfish	MODERN SPECIES	250	abhd14b (ENSSPAG00000006268)	mst1 (ENSSPAG00000006083)	ENSSPAG00000006053	C3orf18 (ENSSPAG00000006023)	gnb1b (ENSSPAG00000005965)	tardbpb (ENSSPAG00000005946)	cenps (ENSSPAG00000005934)	rbp7b (ENSSPAG00000005924)	H6PD (ENSSPAG00000005914) #24	epha2a (ENSSPAG00000005894)	HSPB7 (ENSSPAG00000005881)	cplane2 (ENSSPAG00000005846)	ENSSPAG00000005836	ddi2 (ENSSPAG00000005793)	ENSSPAG00000005777 #22	ENSSPAG00000005761 ##22	arl8ba (ENSSPAG00000005746)	edem1 (ENSSPAG00000005711)	ENSSPAG00000005694
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Oryzias	ANCESTRAL SPECIES	2	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g.b	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Indian medaka	MODERN SPECIES	5	emg1 (ENSOMEG00000012687)	nop2 (ENSOMEG00000012751)	ing4 (ENSOMEG00000012769)	ncapd2 (ENSOMEG00000012846)	nppcl (ENSOMEG00000012872)	gapdh (ENSOMEG00000012911)	IFFO1 (ENSOMEG00000012942)	tnfrsf1a (ENSOMEG00000012971)	ENSOMEG00000013005	ENSOMEG00000013020	mrpl51 (ENSOMEG00000013053)	vamp1b (ENSOMEG00000013069)	ENSOMEG00000013100	c1r (ENSOMEG00000013179)	ENSOMEG00000013221	ENSOMEG00000013249 ##22	rbp5 (ENSOMEG00000013276)	ptpn6 (ENSOMEG00000013303)	CHD4 (ENSOMEG00000013408)	wnt4b (ENSOMEG00000013453)	cdc42l (ENSOMEG00000013478)	mlf2 (ENSOMEG00000013518)	ENO2 (ENSOMEG00000013561) ##28	ENSOMEG00000013607 ##30	ENSOMEG00000013625	tpi1b (ENSOMEG00000013681)	lpcat3 (ENSOMEG00000013728)	CLSTN3 (ENSOMEG00000013818)	pex5 (ENSOMEG00000013891)	cdca3 (ENSOMEG00000013921)	gnb3a (ENSOMEG00000013971)
Javanese ricefish	MODERN SPECIES	7	nop2 (ENSOJAG00000013913)	ing4 (ENSOJAG00000014015)	ncapd2 (ENSOJAG00000014058)	nppcl (ENSOJAG00000014352)	gapdh (ENSOJAG00000014377)	IFFO1 (ENSOJAG00000015141)	tnfrsf1a (ENSOJAG00000015148)	ENSOJAG00000007490	ENSOJAG00000007504	mrpl51 (ENSOJAG00000007511)	vamp1b (ENSOJAG00000007549)	ENSOJAG00000007561	c1r (ENSOJAG00000007602)	ENSOJAG00000007837	ENSOJAG00000007845	ENSOJAG00000007906 ##22	rbp5 (ENSOJAG00000007923)	ptpn6 (ENSOJAG00000008029)	CHD4 (ENSOJAG00000009186)	wnt4b (ENSOJAG00000011876)	cdc42l (ENSOJAG00000011945)	mlf2 (ENSOJAG00000011973)	ENO2 (ENSOJAG00000012034) ##28	ENSOJAG00000013133 ##30	ENSOJAG00000013143	tpi1b (ENSOJAG00000013155)	lpcat3 (ENSOJAG00000013232)	CLSTN3 (ENSOJAG00000013335)	pex5 (ENSOJAG00000013608)	cdca3 (ENSOJAG00000013673)	gnb3a (ENSOJAG00000013683)
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a
Japanese Medaka HdrR	MODERN SPECIES	7	emg1 (ENSORLG00000012146)	ENSORLG00000012153	ing4 (ENSORLG00000012172)	ENSORLG00000024287	wu:fj39g12 (ENSORLG00000012204)	gapdh (ENSORLG00000012224)	IFFO1 (ENSORLG00000029960)	tnfrsf1a (ENSORLG00000012260)	ENSORLG00000012267	ENSORLG00000023416	mrpl51 (ENSORLG00000026054)	vamp1b (ENSORLG00000012300)	ENSORLG00000012315	c1r (ENSORLG00000012352)	ENSORLG00000012367	ENSORLG00000028634 ##22	rbp5 (ENSORLG00000012372)	ptpn6 (ENSORLG00000012425)	ENSORLG00000012477	wnt4b (ENSORLG00000012515)	cdc42l (ENSORLG00000024257)	mlf2 (ENSORLG00000012544)	ENO2 (ENSORLG00000012577) ##28	ENSORLG00000025219 ##30	ENSORLG00000012581	tpi1b (ENSORLG00000012599)	lpcat3 (ENSORLG00000012627)	CLSTN3 (ENSORLG00000012657)	pex5 (ENSORLG00000022024)	cdca3 (ENSORLG00000027006)	gnb3a (ENSORLG00000012677)
Chinese medaka	MODERN SPECIES	467	ENSOSIG00000011696	emg1 (ENSOSIG00000011697)	nop2 (ENSOSIG00000011699)	ing4 (ENSOSIG00000011785)	ncapd2 (ENSOSIG00000011789)	nppcl (ENSOSIG00000011826)	gapdh (ENSOSIG00000011836)	IFFO1 (ENSOSIG00000012400)	tnfrsf1a (ENSOSIG00000012404)	ENSOSIG00000012405	mrpl51 (ENSOSIG00000012409)	vamp1b (ENSOSIG00000012413)	ENSOSIG00000012418	c1r (ENSOSIG00000012425)	ENSOSIG00000012432	ENSOSIG00000012435 ##22	rbp5 (ENSOSIG00000012439)	ptpn6 (ENSOSIG00000012454)	CHD4 (ENSOSIG00000013891)	wnt4b (ENSOSIG00000014384)	cdc42l (ENSOSIG00000014388)	mlf2 (ENSOSIG00000014389)	ENSOSIG00000014390 ##28	ENSOSIG00000014392	tpi1b (ENSOSIG00000014394)	lpcat3 (ENSOSIG00000014408)	CLSTN3 (ENSOSIG00000014425)	pex5 (ENSOSIG00000016936)	cdca3 (ENSOSIG00000016950)	gnb3a (ENSOSIG00000016954)	usp5 (ENSOSIG00000017062)
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.d.a	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.d.a	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Mangrove rivulus	MODERN SPECIES	33	ENSKMAG00000007054	emg1 (ENSKMAG00000007069)	ENSKMAG00000007111	ing4 (ENSKMAG00000007187)	ncapd2 (ENSKMAG00000007222)	nppcl (ENSKMAG00000007368)	gapdh (ENSKMAG00000007391)	IFFO1 (ENSKMAG00000007591)	tnfrsf1a (ENSKMAG00000007634)	ENSKMAG00000007663	mrpl51 (ENSKMAG00000007684)	vamp1b (ENSKMAG00000007705)	ENSKMAG00000007746	c1r (ENSKMAG00000007760)	ENSKMAG00000007780	ENSKMAG00000007791 ##22	rbp5 (ENSKMAG00000007816)	ptpn6 (ENSKMAG00000007851)	CHD4 (ENSKMAG00000007932)	wnt4b (ENSKMAG00000008001)	cdc42l (ENSKMAG00000008044)	cdc42l (ENSKMAG00000008074)	mlf2 (ENSKMAG00000008091)	ENO2 (ENSKMAG00000008116) ##28	ENSKMAG00000008170 ##30	ENSKMAG00000008200	tpi1b (ENSKMAG00000008211)	lpcat3 (ENSKMAG00000008293)	CLSTN3 (ENSKMAG00000008381)	pex5 (ENSKMAG00000008509)	cdca3 (ENSKMAG00000008656)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.c	ENSGT00940000153675.a.a.a.a.a.a.d.a	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605
NAME_4	ANCESTRAL SPECIES	1	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.d.a	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Mummichog	MODERN SPECIES	2274				ncapd2 (ENSFHEG00000013295)	nppcl (ENSFHEG00000013151)	gapdh (ENSFHEG00000013138)	IFFO1 (ENSFHEG00000013095)	tnfrsf1a (ENSFHEG00000013041)	ENSFHEG00000012995	mrpl51 (ENSFHEG00000012964)	vamp1b (ENSFHEG00000012960)	ENSFHEG00000012942	c1r (ENSFHEG00000012915)	ENSFHEG00000012901	ENSFHEG00000000283	ENSFHEG00000012860 ##22	rbp5 (ENSFHEG00000012853)	ptpn6 (ENSFHEG00000012828)	ENSFHEG00000012736	wnt4b (ENSFHEG00000012446)	cdc42l (ENSFHEG00000012415)	cdc42l (ENSFHEG00000012398)	mlf2 (ENSFHEG00000012384)	ENO2 (ENSFHEG00000012344) ##28	ENSFHEG00000012298 ##30	ENSFHEG00000012269	tpi1b (ENSFHEG00000012258)	lpcat3 (ENSFHEG00000012206)	CLSTN3 (ENSFHEG00000012151)	pex5 (ENSFHEG00000012080)	cdca3 (ENSFHEG00000011915)
Sheepshead minnow	MODERN SPECIES	160	emg1 (ENSCVAG00000001164)	nop2 (ENSCVAG00000001162)	ing4 (ENSCVAG00000001160)	ncapd2 (ENSCVAG00000001158)	nppcl (ENSCVAG00000000045)	gapdh (ENSCVAG00000001151)	IFFO1 (ENSCVAG00000001148)	tnfrsf1a (ENSCVAG00000001144)	ENSCVAG00000001143	ENSCVAG00000001140	mrpl51 (ENSCVAG00000001138)	vamp1b (ENSCVAG00000001137)	ENSCVAG00000001136	c1r (ENSCVAG00000001134)	ENSCVAG00000001132	ENSCVAG00000001131 ##22	rbp5 (ENSCVAG00000001130)	ptpn6 (ENSCVAG00000001129)	CHD4 (ENSCVAG00000001128)	wnt4b (ENSCVAG00000001126)	cdc42l (ENSCVAG00000001125)	mlf2 (ENSCVAG00000001124)	ENO2 (ENSCVAG00000001123) ##28	ENSCVAG00000023271 ##30	ENSCVAG00000023242	tpi1b (ENSCVAG00000023235)	lpcat3 (ENSCVAG00000023202)	CLSTN3 (ENSCVAG00000023161)	pex5 (ENSCVAG00000023048)	cdca3 (ENSCVAG00000022957)	gnb3a (ENSCVAG00000022940)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.c	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
Poecilia	ANCESTRAL SPECIES		ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.c	ENSGT00940000153675.a.a.a.a.a.a.d.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343
NAME_6	ANCESTRAL SPECIES	24	ENSGT00390000000305	ENSGT00940000161554	ENSGT00940000159033	ENSGT00940000153566.a	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT00990000203876	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.a.a.c	ENSGT00940000153675.a.a.a.a.a.a.d.b.a	ENSGT00940000153675.a.a.a.a.a.a.d.b.b	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT01100000263489.a.a.b.a.a.a.g	ENSGT00390000013354.b.a	ENSGT01030000234564.b	ENSGT00950000183086.a.b	ENSGT00940000156605
Sailfin molly	MODERN SPECIES	760	ing4 (ENSPLAG00000000120)	ncapd2 (ENSPLAG00000005906)	nppcl (ENSPLAG00000005892)	gapdh (ENSPLAG00000005851)	IFFO1 (ENSPLAG00000005820)	tnfrsf1a (ENSPLAG00000005764)	ENSPLAG00000005747	ENSPLAG00000005734	mrpl51 (ENSPLAG00000000112)	vamp1b (ENSPLAG00000005704)	ENSPLAG00000005683	c1r (ENSPLAG00000005673)	ENSPLAG00000005653	ENSPLAG00000005609	ENSPLAG00000005588	ENSPLAG00000005551 ##22
Amazon molly	MODERN SPECIES	286	ing4 (ENSPFOG00000013196)	ncapd2 (ENSPFOG00000013227)	nppcl (ENSPFOG00000013515)	gapdh (ENSPFOG00000024059)	IFFO1 (ENSPFOG00000013521)	ENSPFOG00000021871	ENSPFOG00000022946	tnfrsf1a (ENSPFOG00000013634)	ENSPFOG00000013664	ENSPFOG00000013679	mrpl51 (ENSPFOG00000013680)	vamp1b (ENSPFOG00000013702)	ENSPFOG00000013728	c1r (ENSPFOG00000013760)	ENSPFOG00000024460	ENSPFOG00000013858 ##22	rbp5 (ENSPFOG00000013861)	ptpn6 (ENSPFOG00000013863)	CHD4 (ENSPFOG00000013889)	wnt4b (ENSPFOG00000014292)	cdc42l (ENSPFOG00000014351)	cdc42l (ENSPFOG00000014382)	mlf2 (ENSPFOG00000014383)	cdc42l (ENSPFOG00000023246)	ENO2 (ENSPFOG00000014388) ##28	ENSPFOG00000014520 ##30	ENSPFOG00000014532	tpi1b (ENSPFOG00000014538)	lpcat3 (ENSPFOG00000014564)	ENSPFOG00000014661	pex5 (ENSPFOG00000014889)
Platyfish	MODERN SPECIES	12	cacna2d2a (ENSXMAG00000016776)	abhd14b (ENSXMAG00000016772)	mst1 (ENSXMAG00000016740)	ENSXMAG00000016739	C3orf18 (ENSXMAG00000029509)	gnb1b (ENSXMAG00000016725)	tardbpb (ENSXMAG00000016713)	cenps (ENSXMAG00000026091)	rbp7b (ENSXMAG00000016704)	H6PD (ENSXMAG00000024194) #24	epha2a (ENSXMAG00000017950)	cplane2 (ENSXMAG00000016692)	ENSXMAG00000029830	ddi2 (ENSXMAG00000016673)	ENSXMAG00000025779	ENSXMAG00000026685 ##22	arl8ba (ENSXMAG00000016669)	edem1 (ENSXMAG00000016642)	gnat1 (ENSXMAG00000016611)	sema3fa (ENSXMAG00000016530)	ENSXMAG00000023162	CAMKV (ENSXMAG00000016499)	ENSXMAG00000016479	ENSXMAG00000016439	inka1b (ENSXMAG00000016436)	gnai2b (ENSXMAG00000026442)	SLC38A3 (ENSXMAG00000016423)	rbm5 (ENSXMAG00000016369)	ENSXMAG00000024986	ENSXMAG00000023148	TEX264 (ENSXMAG00000029495)
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00940000180930	ENSGT00390000015492.A	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a	ENSGT00940000159540.d	ENSGT00940000161250	ENSGT01050000245031	ENSGT00390000018821	ENSGT00940000164382.b.b	ENSGT00940000160453	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b.m.b	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a ##22	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b.l	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a ##28	ENSGT00940000153615.b ##30	ENSGT00390000008714.b	ENSGT00940000160115.a.a	ENSGT00940000157292.fc.b	ENSGT00940000159960.d	ENSGT00940000162624	ENSGT00520000055635.c.b.b
Northern pike	MODERN SPECIES	19	ncapd2 (ENSELUG00000017486)	nppcl (ENSELUG00000028261)	gapdh (ENSELUG00000017541)	opn9 (ENSELUG00000017580)	ENSELUG00000017619	tnfrsf1a (ENSELUG00000001251)	ENSELUG00000030078	ENSELUG00000000712	mrpl51 (ENSELUG00000017748)	vamp1b (ENSELUG00000017767)	ENSELUG00000017787	c1r (ENSELUG00000017805)	ENSELUG00000032734	ENSELUG00000017961	ENSELUG00000017902	ENSELUG00000017977 ##22	rbp5 (ENSELUG00000029027)	ptpn6 (ENSELUG00000018008)	CHD4 (ENSELUG00000018086)	wnt4b (ENSELUG00000018120)	cdc42l (ENSELUG00000018148)	mlf2 (ENSELUG00000018167)	ENO2 (ENSELUG00000000762) ##28	ENSELUG00000018234	ENSELUG00000018251	ENSELUG00000018273	ENSELUG00000031348	dedd1 (ENSELUG00000018333)	ENSELUG00000000792	ENSELUG00000034402	ERF (ENSELUG00000000796)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	5	ENSGT00940000161250.e	ENSGT00510000046803.b.a.a.f	ENSGT00940000159540.d.d	ENSGT00940000161250.f	ENSGT01050000245031	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00390000018821.e	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b.m.b.a	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a ##22	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.r	ENSGT00950000182805.a.a.b.a.c.a.c.b ##28	ENSGT00940000153615.b.b ##30	ENSGT00390000008714.b.f	ENSGT00940000160115.a.a.c	ENSGT00940000157292.fc.b	ENSGT00940000159960.d	ENSGT00940000162624
Huchen	MODERN SPECIES	3963												ENSHHUG00000049152	ENSHHUG00000049148	ENSHHUG00000049146	ENSHHUG00000049138	ENSHHUG00000049132 ##22	ENSHHUG00000049115	ENSHHUG00000049108
Salmoninae_a	ANCESTRAL SPECIES	91	ENSGT00950000183089.d.c	ENSGT00940000161554.g	ENSGT00940000159033.m	ENSGT00940000180930	ENSGT00390000015492.A.b	ENSGT00940000159540.d.d	ENSGT00940000161250.f	ENSGT01050000245031	ENSGT00390000018821.e	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.b.m.b.a	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a ##22	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.r	ENSGT00950000182805.a.a.b.a.c.a.c.b ##28	ENSGT00940000153615.b.b ##30
Salmo	ANCESTRAL SPECIES	77	ENSGT00940000170732	ENSGT00940000161554.g.e	ENSGT00390000015492.A.b	ENSGT00940000153298.i.a.g	ENSGT00510000046803.b.a.a.f.a	ENSGT00940000159540.d.d	ENSGT00940000161250.f	ENSGT01050000245031.d	ENSGT00390000018821.e	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a.d	ENSGT00940000157473.b.b.m.b.a	ENSGT00940000157473.b.b.m.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a ##22	ENSGT00940000165886.g	ENSGT00940000159480.c.a	ENSGT00390000008714.b.e.a.a	ENSGT00940000160115.a.a.c.a.a	ENSGT00940000157292.fc.b.d	ENSGT00940000159960.d.a	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.h	ENSGT00940000166708.q.b	ENSGT00940000158852.c.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b	ENSGT01100000263956	ENSGT01100000263479.H.c.b.i.a.b	ENSGT00950000183199.a.b.a.b.b.a	ENSGT00940000154614.ke.b
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000042230	ENSSSAG00000042306	ANFC1 (ENSSSAG00000042457)	gapdh (ENSSSAG00000099398)	opn9 (ENSSSAG00000044705)	ENSSSAG00000083434	tnfrsf1a (ENSSSAG00000051406)	ENSSSAG00000105430	ENSSSAG00000051391	ENSSSAG00000003335	mrpl51 (ENSSSAG00000046358)	ENSSSAG00000082903	ENSSSAG00000046397	ENSSSAG00000046468	ENSSSAG00000002963	ENSSSAG00000101489 ##22	rbp5 (ENSSSAG00000116434)	ptpn6 (ENSSSAG00000039390)	ENSSSAG00000093791	ENSSSAG00000094205	wnt4b (ENSSSAG00000061388)	CDC42 (ENSSSAG00000106298)	mlf2 (ENSSSAG00000099573)	ENSSSAG00000059449 ##28	ENSSSAG00000110649 ##30	ENSSSAG00000116781	ENSSSAG00000059358	ENSSSAG00000059350	ENSSSAG00000099931	dedd2 (ENSSSAG00000003442)	ENSSSAG00000059145
River trout	MODERN SPECIES	22	ING4 (ENSSTUG00000049680)	nppcl (ENSSTUG00000049672)	gapdh (ENSSTUG00000049645)	opn9 (ENSSTUG00000049638)	IFFO1 (ENSSTUG00000049632)	tnfrsf1a (ENSSTUG00000049628)	ENSSTUG00000049626	ENSSTUG00000049622	mrpl51 (ENSSTUG00000049618)	vamp1b (ENSSTUG00000049615)	ENSSTUG00000049614	c1r (ENSSTUG00000049601)	ENSSTUG00000049599	ENSSTUG00000049598	ENSSTUG00000049596	ENSSTUG00000049594 ##22	rbp5 (ENSSTUG00000049591)	ptpn6 (ENSSTUG00000049558)	CHD4 (ENSSTUG00000048806)	wnt4b (ENSSTUG00000048763)	cdc42l (ENSSTUG00000048756)	mlf2 (ENSSTUG00000048745)	ENSSTUG00000048741	ENO2 (ENSSTUG00000048699) ##28	ENSSTUG00000048693	s100t (ENSSTUG00000048689)	CHRNB2 (ENSSTUG00000048683)	s100t (ENSSTUG00000048680)	ENSSTUG00000048676	FSBP (ENSSTUG00000048672)	RAD54B (ENSSTUG00000048669)
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000180930	ENSGT00390000015492.A.b	ENSGT01100000263524.B.a.a.d	ENSGT00510000046803.b.a.a.e.a.a	ENSGT00940000159540.d.d	ENSGT00940000161250.f.a	ENSGT01050000245031.f	ENSGT00390000018821.e	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a.e.b	ENSGT00940000157473.b.b.m.b.a	ENSGT00950000183084.b.a.a.a.f	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a.a ##22	ENSGT00940000165886.h	ENSGT00940000159480.d.a.b	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000166118.d	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000160115.a.a.d	ENSGT00940000157292.fc.b.f	ENSGT00940000159960.d.c	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b.i.a	ENSGT00940000166708.o.a	ENSGT00940000158852.c.b	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a	ENSGT01100000263479.H.c.a.a
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000026172	nppcl (ENSOMYG00000026203)	gapdh (ENSOMYG00000005987)	opn9 (ENSOMYG00000026218)	ENSOMYG00000026223	ENSOMYG00000061898	ENSOMYG00000069319	tnfrsf1a (ENSOMYG00000030134)	lag-3 (ENSOMYG00000029131)	ENSOMYG00000063022	ENSOMYG00000030178	tapbpl (ENSOMYG00000030183)	c1r (ENSOMYG00000030195)	ENSOMYG00000030265	ENSOMYG00000030336	ENSOMYG00000030358 ##22	rbp5 (ENSOMYG00000066856)	ptpn6 (ENSOMYG00000077381)	ENSOMYG00000067950	wnt4b (ENSOMYG00000026253)	cdc42l (ENSOMYG00000026263)	mlf2 (ENSOMYG00000026278)	ENSOMYG00000056821 ##28	ENSOMYG00000069662 ##30	ENSOMYG00000026293	ENSOMYG00000026297	ENSOMYG00000072501	dedd1 (ENSOMYG00000026332)	ENSOMYG00000063403	ENSOMYG00000026376	ENSOMYG00000026370
Oncorhynchus_a	ANCESTRAL SPECIES	97	ENSGT00940000159033.m.c	ENSGT00390000015492.A.b	ENSGT00940000153298.i.a.c	ENSGT01100000263524.B.a.a.d	ENSGT00510000046803.b.a.a.e.a.a	ENSGT00940000159540.d.d	ENSGT00940000161250.f.a	ENSGT01050000245031.f	ENSGT00940000167184	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a.e.b	ENSGT00950000183084.b.a.a.a.f	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a.a ##22	ENSGT00940000165886.h	ENSGT00940000159480.d.a.b	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000166118.d	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000157292.fc.b.f	ENSGT00940000159960.d.c	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b.i.a	ENSGT00940000166708.o.a	ENSGT00940000158852.c.b	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.G.q.b.b
Coho salmon	MODERN SPECIES	4	ING4 (ENSOKIG00005005595)	nppcl (ENSOKIG00005005568)	gapdh (ENSOKIG00005004231)	opn9 (ENSOKIG00005004102)	IFFO1 (ENSOKIG00005004088)	tnfrsf1a (ENSOKIG00005004067)	ENSOKIG00005004059	ENSOKIG00005004047	ENSOKIG00005004040	ENSOKIG00005004036	ENSOKIG00005004025	ENSOKIG00005003898	ENSOKIG00005003874	ENSOKIG00005003871	ENSOKIG00005003864	ENSOKIG00005003853 ##22	ptpn6 (ENSOKIG00005046791)	CHD4 (ENSOKIG00005036503)	wnt4b (ENSOKIG00005035743)	cdc42l (ENSOKIG00005035679)	mlf2 (ENSOKIG00005035660)	ENO2 (ENSOKIG00005035567) ##28	ENSOKIG00005035549 ##30	ENSOKIG00005035543 ##30	ENSOKIG00005035540	ENSOKIG00005035534	ENSOKIG00005035530	dedd1 (ENSOKIG00005035511)	ENSOKIG00005035499	ENSOKIG00005035487	ENSOKIG00005035481
Oncorhynchus	ANCESTRAL SPECIES	53	ENSGT00940000156657.f	ENSGT00950000183106.a.b.b.f.a.a	ENSGT00940000159033.m.d	ENSGT00940000153566.a	ENSGT00390000015492.A.a	ENSGT00940000153298.i.a	ENSGT01100000263524.B.a.a.c	ENSGT00510000046803.b.a.a.e.a.b	ENSGT00940000159540.d.c	ENSGT00940000161250.f.b	ENSGT01050000245031.e	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00950000183084.b.a.a.a.e.a	ENSGT00950000183126.b.a.u.a.b ##22	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i.b	ENSGT00940000166118.c	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00940000160115.a.a.c.a.a	ENSGT00940000157292.fc.b.e	ENSGT00940000159960.d.d	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.j	ENSGT00940000166708.o.b	ENSGT00940000158852.c.a	ENSGT00950000183199.a.b.b	ENSGT00940000163576.l
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000028402	ENSOMYG00000028707	wu:fj39g12 (ENSOMYG00000028902)	gapdh (ENSOMYG00000028924)	opn9 (ENSOMYG00000028935)	ENSOMYG00000029000	ENSOMYG00000065625	ENSOMYG00000070662	TNFR1b (ENSOMYG00000029089)	ENSOMYG00000029108	ENSOMYG00000030160	MRPL51 (ENSOMYG00000029144)	ENSOMYG00000029160	ENSOMYG00000029193	c1r (ENSOMYG00000029228)	tnfr (ENSOMYG00000029243) ##22	ENSOMYG00000062218	rbp5 (ENSOMYG00000029259)	ptpn6 (ENSOMYG00000062402)	ENSOMYG00000029836	ENSOMYG00000029877	ENSOMYG00000029025	wnt4b (ENSOMYG00000029974)	cdc42l (ENSOMYG00000029993)	mlf2 (ENSOMYG00000030031)	ENSOMYG00000030048 ##28	ENSOMYG00000054487 ##30	ENSOMYG00000000092	ENSOMYG00000000101	ENSOMYG00000000110	dedd1 (ENSOMYG00000000169)
Oncorhynchus_a	ANCESTRAL SPECIES	93	ENSGT00950000183106.a.b.b.f.a.a	ENSGT00940000159033.m.d	ENSGT00940000153566.a	ENSGT00940000180930	ENSGT00390000015492.A.a	ENSGT00940000153298.i.a.d	ENSGT01100000263524.B.a.a.c	ENSGT00510000046803.b.a.a.e.a.b	ENSGT00940000159540.d.c	ENSGT00940000161250.f.b	ENSGT01050000245031.e	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00950000183084.b.a.a.a.e.a	ENSGT00950000183126.b.a.u.a.b ##22	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i.b	ENSGT00940000166118.c	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.q.a	ENSGT00940000159960.d.d	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.j	ENSGT00940000166708.o.b	ENSGT00940000158852.c.a	ENSGT00940000165364.b.a	ENSGT01100000263956	ENSGT01100000263479.H.c.b.i.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005001189	ENSOTSG00005001192	dedd1 (ENSOTSG00005001198)	dedd1 (ENSOTSG00005001201)	ENSOTSG00005001204	ENSOTSG00005001209	ENSOTSG00005001215	gsk3ab (ENSOTSG00005001227)	ENSOTSG00005001238	ENSOTSG00005001242	ENSOTSG00005001246	ENSOTSG00005001251	ENSOTSG00005001257	ENSOTSG00005001260	ENSOTSG00005001264	ENSOTSG00005001272 ##22	rbp5 (ENSOTSG00005001275)	ptpn6 (ENSOTSG00005001286)	ENSOTSG00005002094	ZNF526 (ENSOTSG00005002106)	gsk3ab (ENSOTSG00005002111)	znf574 (ENSOTSG00005002123)	ENSOTSG00005002151	ENSOTSG00005002170	ENSOTSG00005002181	ENSOTSG00005002195	PAFAH1B3 (ENSOTSG00005002360)	ENSOTSG00005002369	tlr21 (ENSOTSG00005002373)	cxcr3.2 (ENSOTSG00005002379)	CXCR3 (ENSOTSG00005002383)
Chinook salmon	MODERN SPECIES	3002							ENSOTSG00005046894	ENSOTSG00005046895	ENSOTSG00005046896	ENSOTSG00005046897	ENSOTSG00005046898	ENSOTSG00005046901	ENSOTSG00005046902	ENSOTSG00005046903	ENSOTSG00005046905	ENSOTSG00005046907 ##22	rbp5 (ENSOTSG00005046909)	ptpn6 (ENSOTSG00005046911)
Coho salmon	MODERN SPECIES	11	ENSOKIG00005019121	nop2 (ENSOKIG00005019143)	ING4 (ENSOKIG00005019264)	ncapd2 (ENSOKIG00005019394)	nppcl (ENSOKIG00005019522)	gapdh (ENSOKIG00005019546)	opn9 (ENSOKIG00005019619)	IFFO1 (ENSOKIG00005019650)	tnfrsf1a (ENSOKIG00005019675)	ENSOKIG00005019691	ENSOKIG00005019701	mrpl51 (ENSOKIG00005019717)	ENSOKIG00005019724	ENSOKIG00005019739	ENSOKIG00005019753	ENSOKIG00005019758 ##22	rbp5 (ENSOKIG00005019774)	ptpn6 (ENSOKIG00005019829)	CHD4 (ENSOKIG00005020351)	ENSOKIG00005025067	wnt4b (ENSOKIG00005025084)	cdc42l (ENSOKIG00005025196)	mlf2 (ENSOKIG00005025264)	ENO2 (ENSOKIG00005025306) ##28	ENSOKIG00005025439 ##30	ENSOKIG00005025453	ENSOKIG00005025469	ENSOKIG00005025500	dedd1 (ENSOKIG00005025504)	POU2F2 (ENSOKIG00005025518)	ERF (ENSOKIG00005025554)
Salmoninae	ANCESTRAL SPECIES	1198																ENSGT00950000183126.b.a.u.b ##22	ENSGT00940000165886.h	ENSGT00940000159480.c	ENSGT00940000155088.b.a.b.j.a.b
Salmoninae_a	ANCESTRAL SPECIES	305																ENSGT00950000183126.b.a.u.b ##22	ENSGT00940000165886.h	ENSGT00940000159480.c	ENSGT00940000155088.b.a.b.j.a.b
Salmo	ANCESTRAL SPECIES	57	ENSGT00940000161554.g.f	ENSGT00940000159033.m	ENSGT00940000153566.a	ENSGT00390000015492.A.a	ENSGT00940000153298.i.a.h	ENSGT01100000263524.B.a.a	ENSGT00510000046803.b.a.a.f.b	ENSGT00940000159540.d.c	ENSGT00940000161250.e	ENSGT01050000245031.c	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00950000183084.b.a.a.a.c	ENSGT00940000157473.b.b.m.a.a	ENSGT00950000183126.b.a.u.b ##22	ENSGT00940000165886.h	ENSGT00940000159480.c.b	ENSGT00940000155088.b.a.b.j.a.a	ENSGT00940000166118.e	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00390000005023.a.q	ENSGT00950000182805.a.a.b.a.c.a.c.a ##28	ENSGT00940000155088.b.a.b.j.a.b	ENSGT00940000166118.f	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.r	ENSGT00950000182805.a.a.b.a.c.a.c.b ##28	ENSGT00940000153615.b.b ##30	ENSGT00980000198710.e.b.a.a.b.b.b	ENSGT00390000008714.b.e.a.b
Atlantic salmon	MODERN SPECIES	24	nop2 (ENSSSAG00000074583)	ENSSSAG00000003904	anfc1 (ENSSSAG00000074569)	gapdh (ENSSSAG00000042521)	ENSSSAG00000074511	tnr1a (ENSSSAG00000074496)	ENSSSAG00000074493	ENSSSAG00000003882	ENSSSAG00000113607	tapbpl (ENSSSAG00000074475)	ENSSSAG00000074481	c1r (ENSSSAG00000074469)	ENSSSAG00000003825	ENSSSAG00000052027	ENSSSAG00000003871	ENSSSAG00000117865 ##22	rbp5 (ENSSSAG00000074455)	ptpn6 (ENSSSAG00000071957)	ENSSSAG00000062647	ENSSSAG00000100792 ##30	ENSSSAG00000003430	ENSSSAG00000114829	ENSSSAG00000087244	dedd1 (ENSSSAG00000059305)	ENSSSAG00000097009	ENSSSAG00000115246	ENSSSAG00000059116	ENSSSAG00000107687	ZNF526 (ENSSSAG00000114243)	gsk3ab (ENSSSAG00000058347)	znf574 (ENSSSAG00000003807)
River trout	MODERN SPECIES	30	ENSSTUG00000017372	nop2 (ENSSTUG00000017381)	ING4 (ENSSTUG00000017488)	ncapd2 (ENSSTUG00000017527)	nppcl (ENSSTUG00000017629)	gapdh (ENSSTUG00000017645)	IFFO1 (ENSSTUG00000017694)	ENSSTUG00000017721	ENSSTUG00000017766	ENSSTUG00000017791	mrpl51 (ENSSTUG00000017799)	ENSSTUG00000017813	ENSSTUG00000017821	ENSSTUG00000017869	ENSSTUG00000018113	ENSSTUG00000018135 ##22	ENSSTUG00000018206	rbp5 (ENSSTUG00000018217)	ptpn6 (ENSSTUG00000018319)	wnt4b (ENSSTUG00000018771)	cdc42l (ENSSTUG00000018784)	mlf2 (ENSSTUG00000018819)	ENO2 (ENSSTUG00000038009) ##28	ENSSTUG00000038148 ##30	ENSSTUG00000038150	ENSSTUG00000038158	ENSSTUG00000038171	dedd1 (ENSSTUG00000038183)	POU2F2 (ENSSTUG00000038251)	ENSSTUG00000038289	ENSSTUG00000038409
Huchen	MODERN SPECIES	1143					ENSHHUG00000026755	ENSHHUG00000026775	ENSHHUG00000026790	ENSHHUG00000026801	ENSHHUG00000026813	vamp1b (ENSHHUG00000026823)	ENSHHUG00000026831	ENSHHUG00000026848	ENSHHUG00000026880	ENSHHUG00000026891	ENSHHUG00000026910	ENSHHUG00000026915 ##22	rbp5 (ENSHHUG00000026928)	ptpn6 (ENSHHUG00000026954)	ENSHHUG00000027344	wnt4b (ENSHHUG00000029348)	cdc42l (ENSHHUG00000029353)	mlf2 (ENSHHUG00000029725)	ENO2 (ENSHHUG00000029736) ##28	ENSHHUG00000030036 ##30	ENSHHUG00000030042	ENSHHUG00000030045	ENSHHUG00000030047	dedd1 (ENSHHUG00000030060)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a.v ##22
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00940000156238.a.a.f	ENSGT00940000159388.d	ENSGT00940000159461.e	ENSGT00940000163109.c.b	ENSGT00410000025882.a.d	ENSGT00990000211601	ENSGT01000000214413.b.a.b.b.b.n	ENSGT00940000154343.fb.d	ENSGT00510000048007	ENSGT00940000162218.c.a	ENSGT00530000063435.b.a #24	ENSGT00940000165103.b.b	ENSGT01030000234571.b.b.b.b	ENSGT00950000182999.a.f	ENSGT01030000235084.d	ENSGT00950000183126.b.a.v ##22	ENSGT00940000154861.n.b.e.b	ENSGT00940000157717.f	ENSGT00940000160395.c	ENSGT01100000263926	ENSGT00940000156703.e.b.d	ENSGT00940000166798.c	ENSGT00940000156468.e.a.a	ENSGT00940000157842.a.b	ENSGT00940000166002.j	ENSGT00940000166002.i	ENSGT00530000063849.A.b.e	ENSGT00940000155125.a.a.c	ENSGT00940000157127.a.f	ENSGT00940000156617.e.a.h	ENSGT00390000011082.qb
Salmo	ANCESTRAL SPECIES	33	ENSGT00940000156238.a.a.e.a	ENSGT00940000159388.d	ENSGT00940000159461.e	ENSGT00940000163109.c.b	ENSGT00410000025882.a.d	ENSGT00990000211601	ENSGT01000000214413.b.a.b.b.b.n	ENSGT00940000154343.fb.d	ENSGT00510000048007	ENSGT00940000162218.c.a	ENSGT00530000063435.b.a #24	ENSGT00940000165103.b.b	ENSGT01030000234571.b.b.b.b.c	ENSGT00950000182999.a.f	ENSGT01030000235084.d	ENSGT00950000183126.b.a.v ##22	ENSGT00940000154861.n.b.e.b	ENSGT00940000157717.f	ENSGT00940000160395.c	ENSGT01100000263926	ENSGT00940000156703.e.b.d	ENSGT00940000166798.c	ENSGT00940000156468.e.a.a	ENSGT00940000157842.a.b	ENSGT01060000249027.a	ENSGT00940000166002.j	ENSGT00530000063849.A.b.e	ENSGT00940000155125.a.a.c	ENSGT00940000157127.a.f	ENSGT00940000156617.e.a.h	ENSGT00390000011082.qb
Atlantic salmon	MODERN SPECIES	3	cacna2d2a (ENSSSAG00000040030)	abhd14b (ENSSSAG00000042065)	mst1 (ENSSSAG00000041345)	ENSSSAG00000117904	ENSSSAG00000042125	ENSSSAG00000042147	gnb1b (ENSSSAG00000042172)	tardbpb (ENSSSAG00000042194)	cenps (ENSSSAG00000042255)	rbp7b (ENSSSAG00000042282)	ENSSSAG00000042322 #24	epha2a (ENSSSAG00000042342)	ENSSSAG00000042800	ENSSSAG00000042815	TR11B (ENSSSAG00000043375)	ENSSSAG00000043401 ##22	edem1 (ENSSSAG00000043481)	gnat1 (ENSSSAG00000105302)	ENSSSAG00000043825	sema3fa (ENSSSAG00000043980)	ENSSSAG00000047593	ENSSSAG00000047649	ENSSSAG00000085290	ENSSSAG00000047891	ENSSSAG00000119951	ENSSSAG00000048987	CC054 (ENSSSAG00000048998)	gnai2b (ENSSSAG00000049010)	ENSSSAG00000089694	ENSSSAG00000049151	rbm5 (ENSSSAG00000054457)
River trout	MODERN SPECIES	5	cacna2d2a (ENSSTUG00000025927)	abhd14b (ENSSTUG00000025853)	mst1 (ENSSTUG00000025037)	ENSSTUG00000024992	C3orf18 (ENSSTUG00000024968)	ENSSTUG00000024955	gnb1b (ENSSTUG00000024899)	tardbpb (ENSSTUG00000024786)	rbp7b (ENSSTUG00000024770)	H6PD (ENSSTUG00000024757) #24	epha2a (ENSSTUG00000024664)	ENSSTUG00000024646	ddi2 (ENSSTUG00000024589)	ENSSTUG00000024579	ENSSTUG00000024562	ENSSTUG00000024552 ##22	arl8ba (ENSSTUG00000024529)	edem1 (ENSSTUG00000023577)	gnat1 (ENSSTUG00000023497)	sema3fa (ENSSTUG00000022173)	ENSSTUG00000022123	ENSSTUG00000022101	CAMKV (ENSSTUG00000022011)	MST1R (ENSSTUG00000021960)	ENSSTUG00000021929	ENSSTUG00000018524	inka1b (ENSSTUG00000018462)	ENSSTUG00000018453	gnai2b (ENSSTUG00000018439)	SLC38A3 (ENSSTUG00000018172)	rbm5 (ENSSTUG00000018034)
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000163109.c.a	ENSGT00410000025882.a.c	ENSGT00940000163135	ENSGT01000000214413.b.a.b.b.b.m	ENSGT00940000154343.fb.c	ENSGT00940000162218.c.b	ENSGT00530000063435.b.b #24	ENSGT00940000165103.b.a	ENSGT00390000010674.a.c	ENSGT00390000006521	ENSGT00950000182999.a.e	ENSGT01030000235084.c	ENSGT00940000174943	ENSGT00940000154861.n.b.f	ENSGT00940000173858.a	ENSGT00950000183126.b.a.v ##22	ENSGT00940000154861.n.b.e.a	ENSGT00940000157717.e	ENSGT00940000160395.d	ENSGT00940000156703.e.b.c	ENSGT00940000166798.d	ENSGT00940000156468.e.a.b	ENSGT00940000157842.a.a	ENSGT00530000063849.A.b.f	ENSGT00940000155125.a.a.d	ENSGT00940000157127.a.e	ENSGT00940000156617.e.a.g	ENSGT01000000221441	ENSGT01090000260533.B	ENSGT00940000156300.i.a.a	ENSGT00390000008224.d
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00940000165103.b.a	ENSGT00390000010674.a.c	ENSGT00390000006521	ENSGT00950000182999.a.e	ENSGT01030000235084.c	ENSGT00940000174943	ENSGT00940000154861.n.b.f	ENSGT00940000157717.f	ENSGT00940000160395.c	ENSGT00940000156703.e.b.d	ENSGT00940000166798.c	ENSGT00940000156468.e.a.a	ENSGT00940000157842.a.b	ENSGT00940000166002.j	ENSGT00940000173858.a	ENSGT00950000183126.b.a.v ##22	ENSGT00940000154861.n.b.e.a	ENSGT00940000157717.e	ENSGT00940000160395.d	ENSGT00940000156703.e.b.c	ENSGT00940000166798.d	ENSGT00940000156468.e.a.b	ENSGT00940000157842.a.a	ENSGT00530000063849.A.b.f	ENSGT00940000155125.a.a.d	ENSGT00940000157127.a.e	ENSGT00940000156617.e.a.g	ENSGT01000000221441	ENSGT01090000260533.B	ENSGT00940000156300.i.a.a	ENSGT00390000008224.d
Chinook salmon	MODERN SPECIES	31	ENSOTSG00005003193	cacna2d2a (ENSOTSG00005000773)	abhd14b (ENSOTSG00005000750)	mst1 (ENSOTSG00005000748)	C3orf18 (ENSOTSG00005000743)	CALML6 (ENSOTSG00005000742)	gnb1b (ENSOTSG00005000740)	tardbpb (ENSOTSG00005000733)	rbp7b (ENSOTSG00005000728)	H6PD (ENSOTSG00005000685) #24	epha2a (ENSOTSG00005042219)	ENSOTSG00005042214	cplane2 (ENSOTSG00005042211)	ddi2 (ENSOTSG00005042205)	ENSOTSG00005042199	ENSOTSG00005042196 ##22	arl8ba (ENSOTSG00005042194)	edem1 (ENSOTSG00005041904)	gnat1 (ENSOTSG00005041901)	sema3fa (ENSOTSG00005041385)	ENSOTSG00005041373	CAMKV (ENSOTSG00005041315)	MST1R (ENSOTSG00005041314)	inka1b (ENSOTSG00005041311)	GNAI2 (ENSOTSG00005041307)	rbm5 (ENSOTSG00005041283)	ENSOTSG00005041282	GNAS (ENSOTSG00005041220)	ipo9 (ENSOTSG00005040945)	shisa4 (ENSOTSG00005040939)	LMOD1 (ENSOTSG00005040936)
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00950000183126.b.a ##22
Coelacanth	MODERN SPECIES	1294																ENSLACG00000022535 ##22	ING4 (ENSLACG00000012058)	ncapd2 (ENSLACG00000011632)	GAPDH (ENSLACG00000011191)	ENSLACG00000010385	GPR162 (ENSLACG00000009003)	P3H3 (ENSLACG00000008027)	GNB3 (ENSLACG00000007482)	ENSLACG00000007132	USP5 (ENSLACG00000006506)	TPI1 (ENSLACG00000006017)	SPSB2 (ENSLACG00000005624) ##23	ENSLACG00000005189	ENSLACG00000005021	ENSLACG00000003562	ENSLACG00000003293
Elephant shark	MODERN SPECIES	1661	atp13a2 (ENSCMIG00000015177)	sdhb (ENSCMIG00000015130)	padi2 (ENSCMIG00000015105)	agrn (ENSCMIG00000014993) #37	ptpn11b (ENSCMIG00000014805)	RNF223 (ENSCMIG00000014761)	ENSCMIG00000014760	ENSCMIG00000014758	ENSCMIG00000014757	ENSCMIG00000014755	ENSCMIG00000014753	mrpl20 (ENSCMIG00000014751)	c1qtnf12 (ENSCMIG00000014748)	b3galt6 (ENSCMIG00000014746)	sdf4 (ENSCMIG00000014743)	ENSCMIG00000014741 ##22	ube2j2 (ENSCMIG00000014735)	VWA1 (ENSCMIG00000014730)	ATAD3A (ENSCMIG00000014669)	TMEM240 (ENSCMIG00000014640)	ssu72 (ENSCMIG00000014638)	FNDC10 (ENSCMIG00000014633)	ENSCMIG00000014627	ENSCMIG00000014624	otud3 (ENSCMIG00000014623)	ENSCMIG00000014622	her9 (ENSCMIG00000014620) #36	KLHL17 (ENSCMIG00000014618) #34
Gnathostomata	ANCESTRAL SPECIES	5	ENSGT00940000156675	ENSGT00940000165723	ENSGT00940000154704.d	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01010000222287.B.a.a.a.a	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540
Euteleostomi	ANCESTRAL SPECIES	4	ENSGT00940000165723	ENSGT00940000154704.d	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.b
Actinopterygii	ANCESTRAL SPECIES	7	ENSGT00390000004632	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896.k	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.b
Neopterygii	ANCESTRAL SPECIES	10	ENSGT00390000004632	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946.mb	ENSGT00950000182946.lb.a	ENSGT00940000156169.a.a	ENSGT00950000182946.lb.b	ENSGT00940000156169.a.b	ENSGT00940000157373	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896.k	ENSGT00940000157750	ENSGT00940000155648.B
Osteoglossocephalai	ANCESTRAL SPECIES	15													ENSGT00940000182525	ENSGT00940000155648.B.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b	ENSGT00940000156169.a.b	ENSGT00940000157373	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896.k	ENSGT00940000157750	ENSGT00940000155648.B.a	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b
Clupeocephala	ANCESTRAL SPECIES	82	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000156675.d	ENSGT00940000165723.a	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00940000155989.e	ENSGT00940000153956.a.b	ENSGT00940000155896.k	ENSGT00940000157750	ENSGT00940000155648.B.a	ENSGT00940000159911	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00550000074823.b.a
Otomorpha	ANCESTRAL SPECIES	79	ENSGT00390000013948.b	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000155309.p	ENSGT00940000156675.d	ENSGT00940000165723.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00390000018409.g	ENSGT00950000183001.a.a.d.b	ENSGT00390000004719.a	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00940000154710.a.a	ENSGT00940000162142.d	ENSGT00950000182946.lb.a	ENSGT00940000156169.a.a	ENSGT00940000157373.k	ENSGT01010000222287.B.a.a.a.a.a.b	ENSGT00940000155989.d	ENSGT00390000000883
Otophysi	ANCESTRAL SPECIES		ENSGT01060000248591.a.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00940000153560.b.b.a.g	ENSGT00510000047886.a.a	ENSGT00940000161824	ENSGT00940000165760	ENSGT00940000163144.a.a.a	ENSGT00940000163861.b	ENSGT00940000155381	ENSGT00940000157605	ENSGT00940000154596.b	ENSGT00940000155825.p	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154710.a.a	ENSGT00940000162142.d	ENSGT00950000182946.mb	ENSGT00950000182946.lb.a.e	ENSGT00940000156169.a.a	ENSGT00940000157373.k	ENSGT01010000222287.B.a.a.a.a.a.b	ENSGT00940000155989.d	ENSGT00390000000883
Characiphysae	ANCESTRAL SPECIES	54															ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00940000155989.e.b	ENSGT00940000155989.e.a	ENSGT00940000153956.a.b	ENSGT00940000155896.k	ENSGT00940000155648.B.b	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B
Characiphysae_b	ANCESTRAL SPECIES	53															ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00940000155989.e.a	ENSGT00940000153956.a.b	ENSGT00940000155896.k	ENSGT00940000155648.B.b	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929
Characoidei	ANCESTRAL SPECIES	63															ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00940000155989.e.a	ENSGT00940000153956.a.b	ENSGT00940000155896.k	ENSGT00940000155648.B.b	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929
Red-bellied piranha	MODERN SPECIES	848											sgms1a (ENSPNAG00000002893)	minpp1a (ENSPNAG00000013669)	minpp1a (ENSPNAG00000002793)	papss2a (ENSPNAG00000013455)	ENSPNAG00000002729	ENSPNAG00000013351 ##22
Mexicana tetra	MODERN SPECIES	24	p4ha1b (ENSAMXG00000011123)	ENSAMXG00000011118	ENSAMXG00000011113	ecd (ENSAMXG00000011090)	ENSAMXG00000011080	MAP4K3 (ENSAMXG00000011068)	ENSAMXG00000011063	morn2 (ENSAMXG00000039447)	znf593 (ENSAMXG00000039647)	selenon (ENSAMXG00000011032)	ENSAMXG00000011027	minpp1a (ENSAMXG00000040249)	minpp1a (ENSAMXG00000011005)	papss2a (ENSAMXG00000010997)	ENSAMXG00000034893	ENSAMXG00000041395 ##22	SLC16A12 (ENSAMXG00000010978)	pank1a (ENSAMXG00000010968)	zgc:65997 (ENSAMXG00000038112)	HTR7 (ENSAMXG00000040600)	ENSAMXG00000010935	ENSAMXG00000010932	exo1 (ENSAMXG00000010918)	yipf4 (ENSAMXG00000010903)	BIRC6 (ENSAMXG00000010869)	si:dkey-221l4.10 (ENSAMXG00000028340)	jade1 (ENSAMXG00000017786)	ENSAMXG00000030556	asmt2 (ENSAMXG00000017811)	pgrmc2 (ENSAMXG00000034920)	ENSAMXG00000006805
Channel catfish	MODERN SPECIES	28	ENSIPUG00000017649	ENSIPUG00000017660	pcgf5a (ENSIPUG00000017675)	ppp1r3ca (ENSIPUG00000017690)	ENSIPUG00000017696	ENSIPUG00000017701	ENSIPUG00000017708	fam98a (ENSIPUG00000017737)	RASGRP3 (ENSIPUG00000017788)	LTBP1 (ENSIPUG00000017869)	ttc27 (ENSIPUG00000017965)	ENSIPUG00000017982	SGMS1 (ENSIPUG00000017991)	minpp1a (ENSIPUG00000018005)	ENSIPUG00000018017	fas (ENSIPUG00000018072) ##22	SLC16A12 (ENSIPUG00000018118)	pank1a (ENSIPUG00000018133)	ENSIPUG00000018148	ENSIPUG00000018156	ENSIPUG00000018208	BIRC6 (ENSIPUG00000018224)	yipf4 (ENSIPUG00000018317)	exo1 (ENSIPUG00000018328)	ENSIPUG00000018358	ENSIPUG00000018388	ENSIPUG00000018391	mrps5 (ENSIPUG00000018395)	malb (ENSIPUG00000018407)	ENSIPUG00000018415	ENSIPUG00000018424
Cyprinoidei	ANCESTRAL SPECIES	76	ENSGT00940000161234	ENSGT00940000157597	ENSGT00940000155345.q	ENSGT00940000157824.i.b	ENSGT00940000153408.B.t.d.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b.e	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00950000182946.lb.b	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00940000155989.e	ENSGT00940000153956.a.b	ENSGT00940000155896.k	ENSGT00940000155648.B.b	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	313		ENSGT00390000016551.i	ENSGT00940000161234.b	ENSGT00940000157597.e.b	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b.a ##22	ENSGT00940000157373.l.g	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a	ENSGT00940000155989.e.d	ENSGT00940000153956.a.b.b	ENSGT00940000155896.k.h	ENSGT00940000155648.B.b.d	ENSGT00940000154372.b.c	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00940000167863.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w
Cyprininae_a	ANCESTRAL SPECIES	304		ENSGT00390000016551.i	ENSGT00940000161234.b	ENSGT00940000157597.e.a.a.a	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000154335.b.e.b	ENSGT00950000183126.b.b.a ##22	ENSGT00940000157373.l.g	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a	ENSGT00940000155989.e.d	ENSGT00940000153956.a.b.b	ENSGT00940000155896.k.h	ENSGT00940000155648.B.b.d	ENSGT00940000154372.b.c	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00440000037341.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w
Common carp reference	MODERN SPECIES	4	ENSCCRG00000073238 ##29	EHBP1 (ENSCCRG00000072862)	ENSCCRG00000061352	b3gnt2b (ENSCCRG00000082775)	ENSCCRG00000073128	ENSCCRG00000003107	ENSCCRG00000002941	pex13 (ENSCCRG00000003017)	ENSCCRG00000027247	slc18a2 (ENSCCRG00000027262)	ENSCCRG00000080142	sgms1a (ENSCCRG00000027300)	minpp1a (ENSCCRG00000027401)	papss2a (ENSCCRG00000027413)	ptena (ENSCCRG00000077527)	ENSCCRG00000055135 ##22	pank1a (ENSCCRG00000027871)	zgc:65997 (ENSCCRG00000070786)	ENSCCRG00000082306	ENSCCRG00000077844	ENSCCRG00000024565	pcgf5a (ENSCCRG00000024551)	ppp1r3ca (ENSCCRG00000026811)	ENSCCRG00000076912	ENSCCRG00000049382	ENSCCRG00000017745	FAM98A (ENSCCRG00000032614)	rasgrp3 (ENSCCRG00000032622)	LTBP1 (ENSCCRG00000026896)	ttc27 (ENSCCRG00000075792)	BIRC6 (ENSCCRG00000027051)
Golden-line barbel	MODERN SPECIES	17			ENSSGRG00000007348	otx1 (ENSSGRG00000007339)	EHBP1 (ENSSGRG00000006607)	b3gnt2b (ENSSGRG00000006584)	XPO1 (ENSSGRG00000004767)	SANBR (ENSSGRG00000004691)	PDZD8 (ENSSGRG00000004690)	slc18a2 (ENSSGRG00000004688)	ENSSGRG00000004682	sgms1a (ENSSGRG00000004680)	minpp1a (ENSSGRG00000004678)	papss2a (ENSSGRG00000001415)	ptena (ENSSGRG00000001060)	ENSSGRG00000001058 ##22	pank1a (ENSSGRG00000001051)	zgc:65997 (ENSSGRG00000001038)	zgc:65997 (ENSSGRG00000001035)	ENSSGRG00000001033	ANKRD1 (ENSSGRG00000001024)	pcgf5a (ENSSGRG00000001021)	ppp1r3ca (ENSSGRG00000001019)	ENSSGRG00000001017	ENSSGRG00000001014	ENSSGRG00000000743	ENSSGRG00000000727	rasgrp3 (ENSSGRG00000000721)	LTBP1 (ENSSGRG00000000690)	ENSSGRG00000000689	ttc27 (ENSSGRG00000000500)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2379										ENSCARG00000060847	ENSCARG00000060833	sgms1a (ENSCARG00000060822)	minpp1a (ENSCARG00000060801)	papss2a (ENSCARG00000060440)	ENSCARG00000060334	ENSCARG00000060322 ##22	pank1a (ENSCARG00000060199)	zgc:65997 (ENSCARG00000069957)	ENSCARG00000069953
Goldfish	MODERN SPECIES	5	rad9a (ENSCARG00000024505)	ENSCARG00000024545	NDUFS8 (ENSCARG00000014891)	ran (ENSCARG00000014915)	stx3b (ENSCARG00000014972)	KDM2A (ENSCARG00000015168)	ANKRD13D (ENSCARG00000017308)	ctbp1 (ENSCARG00000017487)	spon2a (ENSCARG00000017726)	ENSCARG00000017747	ENSCARG00000017752	ENSCARG00000017755	ENSCARG00000017766	papss2a (ENSCARG00000017816)	ENSCARG00000018270	ENSCARG00000018290 ##22	pank1a (ENSCARG00000018306)	zgc:65997 (ENSCARG00000018328)	ENSCARG00000018336	ENSCARG00000018351	ANKRD1 (ENSCARG00000018389)	pcgf5a (ENSCARG00000018427)	ppp1r3ca (ENSCARG00000018448)	ENSCARG00000018466	ENSCARG00000018471	ENSCARG00000018526	ENSCARG00000019370	rasgrp3 (ENSCARG00000019403)	LTBP1 (ENSCARG00000020520)	ENSCARG00000020768	BIRC6 (ENSCARG00000020819)
Cyprininae	ANCESTRAL SPECIES	40	ENSGT00390000016551.j.b	ENSGT00940000161234.a	ENSGT00940000157597.e.a.b	ENSGT00940000155345.q.c	ENSGT00940000157824.i.b	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b ##22	ENSGT00950000182946.lb.b.f.b	ENSGT00950000182946.lb.b.f.a	ENSGT00940000156169.a.b	ENSGT00940000157373.l.h	ENSGT01010000222287.B.a.a.a.a.a.a.b	ENSGT00940000155989.e.c	ENSGT00940000153956.a.b.a	ENSGT00940000155896.k.g	ENSGT00940000155648.B.b.c	ENSGT00940000154372.b.d	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00440000037341.a	ENSGT00940000158843.j	ENSGT00940000155823.B.c
Goldfish	MODERN SPECIES	8	ENSCARG00000019318	ENSCARG00000019480	ENSCARG00000024116	ENSCARG00000024126	znf593 (ENSCARG00000024136)	selenon (ENSCARG00000024155)	ENSCARG00000024218	mtfr1l (ENSCARG00000024225)	STAC (ENSCARG00000024237)	pacrg (ENSCARG00000024273)	qkia (ENSCARG00000024292)	PTAFR (ENSCARG00000024362)	ENSCARG00000024370	papss2a (ENSCARG00000024486)	ptena (ENSCARG00000027288)	ENSCARG00000027478 ##22	ENSCARG00000027517	ENSCARG00000027527	ENSCARG00000027531	SLC16A12 (ENSCARG00000027535)	pank1a (ENSCARG00000027548)	ENSCARG00000027686	ENSCARG00000027713	ctsl.1 (ENSCARG00000027765)	vgll2b (ENSCARG00000027830)	nipal3 (ENSCARG00000027840)	rcan3 (ENSCARG00000027903)	jade1 (ENSCARG00000027942)	HIOMT (ENSCARG00000027952)	pgrmc2 (ENSCARG00000027959)	ENSCARG00000027972
Cyprininae_a	ANCESTRAL SPECIES	35	ENSGT00390000016551.j.b	ENSGT00940000161234.a	ENSGT00940000157597.e.a.b	ENSGT00940000155345.q.c	ENSGT00940000157824.i.b	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b ##22	ENSGT00950000182946.lb.b.f.b	ENSGT00950000182946.lb.b.f.a	ENSGT00940000156169.a.b	ENSGT00940000157373.l.h	ENSGT01010000222287.B.a.a.a.a.a.a.b	ENSGT00940000155989.e.c	ENSGT00940000153956.a.b.a	ENSGT00940000155896.k.g	ENSGT00940000155648.B.b.c	ENSGT00940000154372.b.d	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00940000167863.b	ENSGT00940000158843.j	ENSGT00940000155823.B.c
Golden-line barbel	MODERN SPECIES	53	ENSSGRG00000009096	otx1 (ENSSGRG00000009093)	EHBP1 (ENSSGRG00000009079)	b3gnt2b (ENSSGRG00000009076)	ENSSGRG00000009075	XPO1 (ENSSGRG00000008167)	SANBR (ENSSGRG00000008070)	pex13 (ENSSGRG00000008068)	PDZD8 (ENSSGRG00000008067)	slc18a2 (ENSSGRG00000008065)	kcnk18 (ENSSGRG00000008063)	sgms1a (ENSSGRG00000008062)	minpp1a (ENSSGRG00000008060)	papss2a (ENSSGRG00000004155)	ptena (ENSSGRG00000003648)	ENSSGRG00000003634 ##22	SLC16A12 (ENSSGRG00000003605)	pank1a (ENSSGRG00000003496)	ENSSGRG00000003482	ENSSGRG00000003479	ENSSGRG00000003475	ENSSGRG00000003460	pcgf5a (ENSSGRG00000003454)	ppp1r3ca (ENSSGRG00000003451)	ENSSGRG00000003449	ENSSGRG00000002271	ENSSGRG00000002191	rasgrp3 (ENSSGRG00000002176)	LTBP1 (ENSSGRG00000001085)	ttc27 (ENSSGRG00000000693)	BIRC6 (ENSSGRG00000000451)
Common carp reference	MODERN SPECIES	30	mdh1ab (ENSCCRG00000026888)	WDPCP (ENSCCRG00000024549)	otx1 (ENSCCRG00000067814)	EHBP1 (ENSCCRG00000022494)	b3gnt2b (ENSCCRG00000053079)	ENSCCRG00000003438	ENSCCRG00000003451	ENSCCRG00000055884	ENSCCRG00000057670	PDZD8 (ENSCCRG00000013188)	slc18a2 (ENSCCRG00000013071)	kcnk18 (ENSCCRG00000013054)	sgms1a (ENSCCRG00000070887)	papss2a (ENSCCRG00000055982)	ptena (ENSCCRG00000040992)	ENSCCRG00000040984 ##22	ENSCCRG00000040975	SLC16A12 (ENSCCRG00000052901)	ENSCCRG00000040972	pank1a (ENSCCRG00000072473)	ENSCCRG00000055882	ENSCCRG00000054383	ENSCCRG00000024493	pcgf5a (ENSCCRG00000063244)	ppp1r3ca (ENSCCRG00000070930)	ENSCCRG00000055943	ENSCCRG00000073651	FAM98A (ENSCCRG00000055260)	rasgrp3 (ENSCCRG00000026875)	LTBP1 (ENSCCRG00000075901)	ttc27 (ENSCCRG00000081226)
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00950000183126.b.b ##22
Denticle herring	MODERN SPECIES	18	macroh2a2 (ENSDCDG00000028894)	ENSDCDG00000028900	ENSDCDG00000028917	atl2 (ENSDCDG00000029106)	galm (ENSDCDG00000029275)	DHX57 (ENSDCDG00000029279)	SPAG9 (ENSDCDG00000029319)	DAGLB (ENSDCDG00000029649)	ENSDCDG00000029671	GPR26 (ENSDCDG00000029673)	CHST15 (ENSDCDG00000029674)	sgms1a (ENSDCDG00000029675)	minpp1a (ENSDCDG00000029678)	papss2a (ENSDCDG00000029691)	ENSDCDG00000030097	ENSDCDG00000030196 ##22	morn4 (ENSDCDG00000030200)	ENSDCDG00000030203	ENSDCDG00000030206	slit1a (ENSDCDG00000030265)	ARHGAP19 (ENSDCDG00000031032)	ENSDCDG00000031041	ENSDCDG00000031290	cutc (ENSDCDG00000034615)	cox15 (ENSDCDG00000034659)	KCNIP2 (ENSDCDG00000034670)	acss1 (ENSDCDG00000034692)	vsx1 (ENSDCDG00000034721)	entpd6 (ENSDCDG00000034729)	ENSDCDG00000034736	pygb (ENSDCDG00000034747)
Euteleosteomorpha	ANCESTRAL SPECIES	88	ENSGT00940000155309	ENSGT00940000156675.d	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000165723.a	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409.g	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b	ENSGT00730000111085.A	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154710.a.a	ENSGT00940000162142.d	ENSGT00950000182946.mb	ENSGT00950000182946.lb.a	ENSGT00940000156169.a.a	ENSGT00940000157373.k
Acanthomorphata	ANCESTRAL SPECIES	24	ENSGT00940000155636.a	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00940000163896	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00940000155636.a	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00940000163896	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Tiger tail seahorse	MODERN SPECIES	406				ENSHCOG00000012901	marveld1 (ENSHCOG00000012893)	pcdh15a (ENSHCOG00000012820)	dkk1a (ENSHCOG00000011699)	prkg1a (ENSHCOG00000011692)	PRKG1 (ENSHCOG00000011653)	ENSHCOG00000011641	sgms1a (ENSHCOG00000011635)	minpp1a (ENSHCOG00000011602)	papss2a (ENSHCOG00000011592)	papss2a (ENSHCOG00000011564)	ENSHCOG00000011538	ENSHCOG00000011521 ##22	GSTO1 (ENSHCOG00000011503)	itprip (ENSHCOG00000011493)	SFR1 (ENSHCOG00000011490)	slka (ENSHCOG00000011478)	SH3PXD2A (ENSHCOG00000011449)	ENSHCOG00000011440
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT00530000067963	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Ballan wrasse	MODERN SPECIES	2242																ENSLBEG00000015646 ##22	itprip (ENSLBEG00000015631)	ENSLBEG00000015319
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b	ENSGT00390000013415.a.a
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b	ENSGT00390000013415.a.a
Lumpfish	MODERN SPECIES	6	polh (ENSCLMG00005013196)	ENSCLMG00005013165	OTOR (ENSCLMG00005013164)	pcsk2 (ENSCLMG00005013162)	BFSP1 (ENSCLMG00005013156)	prokr1b (ENSCLMG00005013155)	plek (ENSCLMG00005013154)	pcdh15a (ENSCLMG00005012915)	dkk1a (ENSCLMG00005012906)	prkg1a (ENSCLMG00005012894)	sgms1a (ENSCLMG00005012887)	ENSCLMG00005012861	minpp1a (ENSCLMG00005012860)	papss2a (ENSCLMG00005011592)	ENSCLMG00005011483	ENSCLMG00005011480 ##22	itprip (ENSCLMG00005011479)	ENSCLMG00005011478	ENSCLMG00005011477	ENSCLMG00005011473	sfr1 (ENSCLMG00005011472)	ENSCLMG00005011464	slka (ENSCLMG00005004822)	SH3PXD2A (ENSCLMG00005021373)	ENSCLMG00005021372	ENSCLMG00005021351	ENSCLMG00005021350	add3b (ENSCLMG00005021305)	ENSCLMG00005021304	smndc1 (ENSCLMG00005021303)	ADRA2A (ENSCLMG00005021301)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b	ENSGT00390000013415.a.a
Pike perch	MODERN SPECIES	10	polh (ENSSLUG00000016337)	GTPBP2 (ENSSLUG00000016352)	OTOR (ENSSLUG00000016362)	pcsk2 (ENSSLUG00000016377)	BFSP1 (ENSSLUG00000016759)	prokr1b (ENSSLUG00000016766)	plek (ENSSLUG00000016774)	pcdh15a (ENSSLUG00000016837)	dkk1a (ENSSLUG00000017283)	prkg1a (ENSSLUG00000017313)	sgms1a (ENSSLUG00000017366)	ENSSLUG00000017372	minpp1a (ENSSLUG00000017375)	papss2a (ENSSLUG00000017561)	ENSSLUG00000019208	ENSSLUG00000019253 ##22	itprip (ENSSLUG00000019263)	gsto2 (ENSSLUG00000019264)	ENSSLUG00000019269	ENSSLUG00000019275	sfr1 (ENSSLUG00000019282)	slka (ENSSLUG00000019323)	SH3PXD2A (ENSSLUG00000019601)	ENSSLUG00000019621	ENSSLUG00000019646	ENSSLUG00000019711	add3b (ENSSLUG00000019883)	MXI1 (ENSSLUG00000021161)	smndc1 (ENSSLUG00000021165)	ADRA2A (ENSSLUG00000021167)	bnip3 (ENSSLUG00000021172)
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000008720	polh (ENSCGOG00000008731)	GTPBP2 (ENSCGOG00000008794)	OTOR (ENSCGOG00000009006)	pcsk2 (ENSCGOG00000009016)	BFSP1 (ENSCGOG00000009643)	prokr1b (ENSCGOG00000009646)	plek (ENSCGOG00000009657)	pcdh15a (ENSCGOG00000010072)	dkk1a (ENSCGOG00000012885)	prkg1a (ENSCGOG00000012903)	sgms1a (ENSCGOG00000012980)	minpp1a (ENSCGOG00000013019)	papss2a (ENSCGOG00000013136)	ENSCGOG00000015116	ENSCGOG00000015525 ##22	gsto2 (ENSCGOG00000015531)	itprip (ENSCGOG00000015712)	ENSCGOG00000015714	CFAP43 (ENSCGOG00000015721)	sfr1 (ENSCGOG00000015761)	ENSCGOG00000015762	ENSCGOG00000015767	slka (ENSCGOG00000015836)	SH3PXD2A (ENSCGOG00000017488)	ENSCGOG00000017513	ENSCGOG00000017567	ENSCGOG00000018838	add3b (ENSCGOG00000019210)	MXI1 (ENSCGOG00000019295)	smndc1 (ENSCGOG00000019299)
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005005591	polh (ENSLCRG00005005598)	GTPBP2 (ENSLCRG00005005599)	OTOR (ENSLCRG00005005606)	pcsk2 (ENSLCRG00005005611)	BFSP1 (ENSLCRG00005005614)	prokr1b (ENSLCRG00005005615)	plek (ENSLCRG00005005620)	pcdh15a (ENSLCRG00005005945)	dkk1a (ENSLCRG00005006130)	prkg1a (ENSLCRG00005006132)	sgms1a (ENSLCRG00005006157)	minpp1a (ENSLCRG00005006160)	papss2a (ENSLCRG00005006175)	ENSLCRG00005007373	ENSLCRG00005007423 ##22	CH25H (ENSLCRG00005007430)	itprip (ENSLCRG00005007432)	gsto2 (ENSLCRG00005007437)	CFAP43 (ENSLCRG00005007449)	sfr1 (ENSLCRG00005007466)	ENSLCRG00005007468	ENSLCRG00005007469	slka (ENSLCRG00005007522)	SH3PXD2A (ENSLCRG00005012367)	ENSLCRG00005012370	ENSLCRG00005012398	ENSLCRG00005014199	add3b (ENSLCRG00005016619)	MXI1 (ENSLCRG00005017259)	smndc1 (ENSLCRG00005017261)
European seabass	MODERN SPECIES	1	ENSDLAG00005015067	OTOR (ENSDLAG00005015108)	pcsk2 (ENSDLAG00005015139)	BFSP1 (ENSDLAG00005015335)	prokr1b (ENSDLAG00005030155)	plek (ENSDLAG00005015357)	pcdh15a (ENSDLAG00005015554)	ENSDLAG00005017975	prkg1a (ENSDLAG00005017988)	sgms1a (ENSDLAG00005018197)	ENSDLAG00005030821	ENSDLAG00005018206	papss2a (ENSDLAG00005018278)	ENSDLAG00005018706	ENSDLAG00005018772	ENSDLAG00005018753 ##22	ENSDLAG00005018761	ENSDLAG00005029693	CFAP43 (ENSDLAG00005018796)	SFR1 (ENSDLAG00005030119)	ENSDLAG00005018823	slka (ENSDLAG00005018991)	SH3PXD2A (ENSDLAG00005020775)	ENSDLAG00005020854	ENSDLAG00005020855	ENSDLAG00005020874	ENSDLAG00005021484	ADD3 (ENSDLAG00005021997)	MXI1 (ENSDLAG00005027479)	smndc1 (ENSDLAG00005000071)	ENSDLAG00005000074
Gilthead seabream	MODERN SPECIES	6	ENSSAUG00010017056	ENSSAUG00010017055	ENSSAUG00010017053	ENSSAUG00010017051	ENSSAUG00010017048	ENSSAUG00010017045	ENSSAUG00010017042	ENSSAUG00010017039	ENSSAUG00010017038	ENSSAUG00010017036	ENSSAUG00010017033	ENSSAUG00010017031	minpp1a (ENSSAUG00010017024)	papss2a (ENSSAUG00010015563)	ENSSAUG00010015539	ENSSAUG00010015531 ##22	CH25H (ENSSAUG00010015528)	itprip (ENSSAUG00010015526)	gsto2 (ENSSAUG00010015523)	ENSSAUG00010015519	ENSSAUG00010015514	sfr1 (ENSSAUG00010015512)	ENSSAUG00010015508	slka (ENSSAUG00010011628)	SH3PXD2A (ENSSAUG00010011549)	ENSSAUG00010011543	ENSSAUG00010011255	ENSSAUG00010011063	add3b (ENSSAUG00010008801)	MXI1 (ENSSAUG00010008765)	smndc1 (ENSSAUG00010008762)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000021198	ENSMAMG00000021195	ENSMAMG00000021180	OTOR (ENSMAMG00000021175)	pcsk2 (ENSMAMG00000021164)	BFSP1 (ENSMAMG00000021151)	prokr1b (ENSMAMG00000021149)	plek (ENSMAMG00000021143)	pcdh15a (ENSMAMG00000021121)	ENSMAMG00000027893	prkg1a (ENSMAMG00000021083)	sgms1a (ENSMAMG00000021075)	ENSMAMG00000021071	papss2a (ENSMAMG00000021044)	ENSMAMG00000021030	ENSMAMG00000027347 ##22	ENSMAMG00000021015	ITPRIP (ENSMAMG00000021013)	GSTO1 (ENSMAMG00000019052)	ENSMAMG00000021001	ENSMAMG00000026634	SFR1 (ENSMAMG00000019022)	ENSMAMG00000018985	slka (ENSMAMG00000018944)	SH3PXD2A (ENSMAMG00000018862)	ENSMAMG00000018825	ENSMAMG00000018370	ENSMAMG00000018299	ADD3 (ENSMAMG00000018273)	ENSMAMG00000018259	smndc1 (ENSMAMG00000018233)
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Siamese fighting fish	MODERN SPECIES	6	polh (ENSBSLG00000021178)	ENSBSLG00000021245	GTPBP2 (ENSBSLG00000021281)	OTOR (ENSBSLG00000021406)	pcsk2 (ENSBSLG00000021443)	BFSP1 (ENSBSLG00000021648)	prokr1b (ENSBSLG00000021695)	plek (ENSBSLG00000021761)	pcdh15a (ENSBSLG00000022021)	dkk1a (ENSBSLG00000023257)	prkg1a (ENSBSLG00000023280)	sgms1a (ENSBSLG00000023368)	minpp1a (ENSBSLG00000023370)	papss2a (ENSBSLG00000023387)	ENSBSLG00000023743	ENSBSLG00000023837 ##22	CH25H (ENSBSLG00000023857)	itprip (ENSBSLG00000023875)	ENSBSLG00000023901	ENSBSLG00000024000	sfr1 (ENSBSLG00000024007)	ENSBSLG00000024011	slka (ENSBSLG00000024080)	SH3PXD2A (ENSBSLG00000024641)	ENSBSLG00000024677	ENSBSLG00000024687	ENSBSLG00000024755	add3b (ENSBSLG00000024923)	MXI1 (ENSBSLG00000025156)	smndc1 (ENSBSLG00000025158)	bnip3 (ENSBSLG00000025160)
Climbing perch	MODERN SPECIES	6	ENSATEG00000004303	ENSATEG00000004318	ENSATEG00000004370	OTOR (ENSATEG00000004429)	pcsk2 (ENSATEG00000004440)	BFSP1 (ENSATEG00000004650)	prokr1b (ENSATEG00000027943)	plek (ENSATEG00000004719)	pcdh15a (ENSATEG00000004779)	ENSATEG00000005467	prkg1a (ENSATEG00000005482)	sgms1a (ENSATEG00000005569)	ENSATEG00000005606	papss2a (ENSATEG00000005753)	ENSATEG00000005833	ENSATEG00000005888 ##22	ENSATEG00000005898	ITPRIP (ENSATEG00000005925)	ENSATEG00000029281	ENSATEG00000005933	ENSATEG00000029509	SFR1 (ENSATEG00000005966)	ENSATEG00000005972	slka (ENSATEG00000006000)	SH3PXD2A (ENSATEG00000026902)	ENSATEG00000006148	ENSATEG00000006196	ENSATEG00000006640	ADD3 (ENSATEG00000006773)	MXI1 (ENSATEG00000006823)	smndc1 (ENSATEG00000006830)
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.e	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Turbot	MODERN SPECIES	6	ENSSMAG00000020655	ENSSMAG00000020653	OTOR (ENSSMAG00000034993)	pcsk2 (ENSSMAG00000020650)	BFSP1 (ENSSMAG00000020649)	prokr1b (ENSSMAG00000020647)	plek (ENSSMAG00000020641)	pcdh15a (ENSSMAG00000020429)	ENSSMAG00000020425	prkg1a (ENSSMAG00000020419)	sgms1a (ENSSMAG00000020417)	ENSSMAG00000020414	MINPP1 (ENSSMAG00000020410)	papss2a (ENSSMAG00000020405)	PTEN (ENSSMAG00000020384)	ENSSMAG00000020376 ##22	ITPRIP (ENSSMAG00000025766)	GSTO1 (ENSSMAG00000020371)	ENSSMAG00000019338	sfr1 (ENSSMAG00000036788)	ENSSMAG00000020324	slka (ENSSMAG00000020242)	SH3PXD2A (ENSSMAG00000020233)	ENSSMAG00000020207	ENSSMAG00000020199	ENSSMAG00000020168	ADD3 (ENSSMAG00000020133)	ENSSMAG00000020129	smndc1 (ENSSMAG00000020118)	ENSSMAG00000020115	bnip3 (ENSSMAG00000020100)
Tongue sole	MODERN SPECIES	3	ptpreb (ENSCSEG00000015501)	gnrh3 (ENSCSEG00000015559)	mgmt (ENSCSEG00000015563)	ebf3a (ENSCSEG00000015565)	ppp2r2d (ENSCSEG00000015594)	bnip3 (ENSCSEG00000015609)	ADRA2A (ENSCSEG00000015615)	smndc1 (ENSCSEG00000015621)	MXI1 (ENSCSEG00000015639)	add3b (ENSCSEG00000015656)	ENSCSEG00000015700	ENSCSEG00000015752	ENSCSEG00000015774	SH3PXD2A (ENSCSEG00000015795)	slka (ENSCSEG00000015824)	ENSCSEG00000015887 ##22	itprip (ENSCSEG00000015896)	gsto2 (ENSCSEG00000015912)	ENSCSEG00000016052	sfr1 (ENSCSEG00000016101)	ENSCSEG00000016114	ENSCSEG00000016123	ENSCSEG00000016134	ENSCSEG00000016194	papss2a (ENSCSEG00000016226)	minpp1a (ENSCSEG00000016261)	ENSCSEG00000016274	sgms1a (ENSCSEG00000016282)	prkg1a (ENSCSEG00000016315)	dkk1a (ENSCSEG00000016340)	ENSCSEG00000016346
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Seriola	ANCESTRAL SPECIES	17	ENSGT00950000182977.B.b.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT01100000266605	ENSGT00940000163514.C	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Greater amberjack	MODERN SPECIES	147	OTOR (ENSSDUG00000011579)	pcsk2 (ENSSDUG00000011595)	BFSP1 (ENSSDUG00000011650)	prokr1b (ENSSDUG00000011720)	ENSSDUG00000011726	plek (ENSSDUG00000011738)	pcdh15a (ENSSDUG00000011835)	ENSSDUG00000013239	prkg1a (ENSSDUG00000013286)	sgms1a (ENSSDUG00000013345)	ENSSDUG00000013376	minpp1a (ENSSDUG00000013389)	papss2a (ENSSDUG00000013401)	ENSSDUG00000013439	ENSSDUG00000013494	ENSSDUG00000013515 ##22	CH25H (ENSSDUG00000013547)	gsto2 (ENSSDUG00000013557)	itprip (ENSSDUG00000013577)	CFAP43 (ENSSDUG00000013587)	sfr1 (ENSSDUG00000013632)	ENSSDUG00000013643	ENSSDUG00000013668	slka (ENSSDUG00000013725)	ENSSDUG00000013815	SH3PXD2A (ENSSDUG00000013835)	ENSSDUG00000013892	ENSSDUG00000013988	ENSSDUG00000015135	add3b (ENSSDUG00000015218)	MXI1 (ENSSDUG00000015315)
Yellowtail amberjack	MODERN SPECIES	3131	ENSSLDG00000025536	OTOR (ENSSLDG00000025535)	pcsk2 (ENSSLDG00000025534)	BFSP1 (ENSSLDG00000025533)	prokr1b (ENSSLDG00000025532)	plek (ENSSLDG00000025531)	pcdh15a (ENSSLDG00000025464)	dkk1a (ENSSLDG00000025445)	prkg1a (ENSSLDG00000025436)	sgms1a (ENSSLDG00000025429)	ENSSLDG00000025428	minpp1a (ENSSLDG00000025426)	papss2a (ENSSLDG00000025425)	ENSSLDG00000025420	CH25H (ENSSLDG00000025417)	ENSSLDG00000025415 ##22	itprip (ENSSLDG00000025412)	gsto2 (ENSSLDG00000025406)	ENSSLDG00000025396	sfr1 (ENSSLDG00000025393)	ENSSLDG00000025392	ENSSLDG00000025380	slka (ENSSLDG00000025369)	ENSSLDG00000025365	SH3PXD2A (ENSSLDG00000025362)	ENSSLDG00000025356
Barramundi perch	MODERN SPECIES	137								pcdh15a (ENSLCAG00010006792)	dkk1a (ENSLCAG00010006796)	prkg1a (ENSLCAG00010006802)	sgms1a (ENSLCAG00010006808)	minpp1a (ENSLCAG00010006812)	minpp1a (ENSLCAG00010006813)	papss2a (ENSLCAG00010006891)	ptena (ENSLCAG00010007107)	ENSLCAG00010007126 ##22	CH25H (ENSLCAG00010007131)	itprip (ENSLCAG00010007134)	ENSLCAG00010007142	ENSLCAG00010007176	sfr1 (ENSLCAG00010007224)	ENSLCAG00010007228	slka (ENSLCAG00010007394)	SH3PXD2A (ENSLCAG00010008004)	ENSLCAG00010008023	ENSLCAG00010008030	ENSLCAG00010008185	ENSLCAG00010008896	add3b (ENSLCAG00010009780)	MXI1 (ENSLCAG00010009819)	smndc1 (ENSLCAG00010009821)
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a	ENSGT00940000163896	ENSGT00940000155351.i	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a	ENSGT00940000163896	ENSGT00940000155351.i	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a.b	ENSGT00940000163896.h	ENSGT00940000155351.j.a.a	ENSGT00940000163896.g	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a.b	ENSGT00940000163896.h	ENSGT00940000155351.j.a.a	ENSGT00940000163896.g	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b
Burton s mouthbrooder	MODERN SPECIES	275	polh (ENSHBUG00000020105)	GTPBP2 (ENSHBUG00000020061)	OTOR (ENSHBUG00000019990)	pcsk2 (ENSHBUG00000019983)	BFSP1 (ENSHBUG00000019976)	prokr1b (ENSHBUG00000019964)	plek (ENSHBUG00000019951)	pcdh15a (ENSHBUG00000019877)	dkk1a (ENSHBUG00000018709)	prkg1a (ENSHBUG00000018705)	sgms1a (ENSHBUG00000018569)	minpp1a (ENSHBUG00000018565)	minpp1a (ENSHBUG00000018556)	papss2a (ENSHBUG00000018553)	ptena (ENSHBUG00000018509)	ENSHBUG00000018438 ##22	itprip (ENSHBUG00000018422)	ENSHBUG00000018402	GSTO1 (ENSHBUG00000018202)	ENSHBUG00000018181	ENSHBUG00000018136	sfr1 (ENSHBUG00000018022)	ENSHBUG00000018003	slka (ENSHBUG00000000531)	SH3PXD2A (ENSHBUG00000017861)	ENSHBUG00000017830	ENSHBUG00000017812	ENSHBUG00000017750	ENSHBUG00000017730	add3b (ENSHBUG00000017711)	MXI1 (ENSHBUG00000000525)
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a.b	ENSGT00940000163896.h	ENSGT00940000155351.j.a.a	ENSGT00940000163896.g	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.j.a.b	ENSGT00940000155351.j.a.a	ENSGT00940000163896.g	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Zebra mbuna	MODERN SPECIES	1095	GTPBP2 (ENSMZEG00005027582)	OTOR (ENSMZEG00005027581)	pcsk2 (ENSMZEG00005027580)	BFSP1 (ENSMZEG00005027579)	prokr1b (ENSMZEG00005027578)	plek (ENSMZEG00005027577)	pcdh15a (ENSMZEG00005027576)	ENSMZEG00005027575	dkk1a (ENSMZEG00005027574)	prkg1a (ENSMZEG00005027573)	sgms1a (ENSMZEG00005027571)	minpp1a (ENSMZEG00005027570)	minpp1a (ENSMZEG00005027569)	papss2a (ENSMZEG00005027568)	ptena (ENSMZEG00005027567)	ENSMZEG00005027566 ##22	itprip (ENSMZEG00005027565)	GSTO1 (ENSMZEG00005027564)	GSTO1 (ENSMZEG00005027563)	ENSMZEG00005027562	ENSMZEG00005027561	sfr1 (ENSMZEG00005027558)	ENSMZEG00005027556	slka (ENSMZEG00005027550)	ENSMZEG00005027549	SH3PXD2A (ENSMZEG00005027544)	ENSMZEG00005027543	ENSMZEG00005027529	ENSMZEG00005027521	add3b (ENSMZEG00005027515)	ENSMZEG00005027512
Eastern happy	MODERN SPECIES	4	GTPBP2 (ENSACLG00000014839)	OTOR (ENSACLG00000014897)	pcsk2 (ENSACLG00000014907)	BFSP1 (ENSACLG00000014928)	prokr1b (ENSACLG00000014942)	plek (ENSACLG00000014995)	pcdh15a (ENSACLG00000015076)	ENSACLG00000015140	dkk1a (ENSACLG00000015222)	prkg1a (ENSACLG00000015243)	sgms1a (ENSACLG00000015392)	minpp1a (ENSACLG00000015408)	minpp1a (ENSACLG00000015441)	papss2a (ENSACLG00000015475)	ptena (ENSACLG00000015534)	ENSACLG00000015612 ##22	sfr1 (ENSACLG00000015625)	ENSACLG00000015631	slka (ENSACLG00000015671)	SH3PXD2A (ENSACLG00000015869)	ENSACLG00000015963	ENSACLG00000015999	ENSACLG00000016051	ENSACLG00000016080	ENSACLG00000016194	add3b (ENSACLG00000016265)	MXI1 (ENSACLG00000016347)	smndc1 (ENSACLG00000016360)	ADRA2A (ENSACLG00000016393)	bnip3 (ENSACLG00000016400)	ppp2r2d (ENSACLG00000016449)
Lyretail cichlid	MODERN SPECIES	295	GTPBP2 (ENSNBRG00000018152)	OTOR (ENSNBRG00000018125)	pcsk2 (ENSNBRG00000018095)	BFSP1 (ENSNBRG00000018076)	prokr1b (ENSNBRG00000018068)	plek (ENSNBRG00000018038)	pcdh15a (ENSNBRG00000017971)	ENSNBRG00000017944	dkk1a (ENSNBRG00000017912)	prkg1a (ENSNBRG00000017862)	sgms1a (ENSNBRG00000017845)	minpp1a (ENSNBRG00000017829)	minpp1a (ENSNBRG00000017809)	papss2a (ENSNBRG00000017778)	ptena (ENSNBRG00000017734)	ENSNBRG00000017716 ##22	itprip (ENSNBRG00000017701)	ENSNBRG00000017673	ENSNBRG00000017647	sfr1 (ENSNBRG00000017636)	ENSNBRG00000017621	slka (ENSNBRG00000017589)	ENSNBRG00000017573	SH3PXD2A (ENSNBRG00000017528)	ENSNBRG00000017508	ENSNBRG00000017282	ENSNBRG00000017200	add3b (ENSNBRG00000017141)	ENSNBRG00000017109	smndc1 (ENSNBRG00000017089)	ADRA2A (ENSNBRG00000017081)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000033787	polh (ENSONIG00000000334)	GTPBP2 (ENSONIG00000000337)	OTOR (ENSONIG00000000346)	pcsk2 (ENSONIG00000000347)	BFSP1 (ENSONIG00000000352)	prokr1b (ENSONIG00000000353)	plek (ENSONIG00000000354)	pcdh15a (ENSONIG00000000355)	dkk1a (ENSONIG00000000368)	prkg1a (ENSONIG00000000369)	sgms1a (ENSONIG00000000377)	minpp1a (ENSONIG00000000379)	papss2a (ENSONIG00000000381)	PTEN (ENSONIG00000000386)	ENSONIG00000000388 ##22	itprip (ENSONIG00000020722)	ENSONIG00000033302	GSTO1 (ENSONIG00000000390)	ENSONIG00000031986	ENSONIG00000000395	sfr1 (ENSONIG00000000396)	ENSONIG00000000397	slka (ENSONIG00000000402)	ENSONIG00000029796	SH3PXD2A (ENSONIG00000000407)	ENSONIG00000000409	ENSONIG00000000410	ENSONIG00000000419	add3b (ENSONIG00000000421)	ENSONIG00000040263
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.`b.b	ENSGT00390000018409.h.`b.a	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.`b.b	ENSGT00390000018409.h.`b.a	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00530000067963	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00530000064714	ENSGT00940000155351	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.`b.b	ENSGT00390000018409.h.`b.a	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351.k.b	ENSGT00940000163896	ENSGT00940000155351.l	ENSGT00940000155351.k.a	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Orange clownfish	MODERN SPECIES	12	polh (ENSAPEG00000010590)	GTPBP2 (ENSAPEG00000010531)	OTOR (ENSAPEG00000010511)	pcsk2 (ENSAPEG00000010458)	BFSP1 (ENSAPEG00000010434)	prokr1b (ENSAPEG00000010416)	plek (ENSAPEG00000010381)	pcdh15a (ENSAPEG00000009455)	dkk1a (ENSAPEG00000009366)	prkg1a (ENSAPEG00000009279)	sgms1a (ENSAPEG00000009231)	minpp1a (ENSAPEG00000009219)	minpp1a (ENSAPEG00000009212)	papss2a (ENSAPEG00000009162)	ENSAPEG00000009134	ENSAPEG00000009120 ##22	CH25H (ENSAPEG00000009103)	itprip (ENSAPEG00000009096)	ENSAPEG00000009093	GSTO1 (ENSAPEG00000009066)	GSTO1 (ENSAPEG00000009047)	ENSAPEG00000009035	sfr1 (ENSAPEG00000009026)	slka (ENSAPEG00000008890)	SH3PXD2A (ENSAPEG00000008815)	ENSAPEG00000008779	ENSAPEG00000008387	ENSAPEG00000007890	add3b (ENSAPEG00000007803)	ENSAPEG00000007785	smndc1 (ENSAPEG00000007752)
Clown anemonefish	MODERN SPECIES	3364												sgms1a (ENSAOCG00000014526)	minpp1a (ENSAOCG00000014499)	papss2a (ENSAOCG00000014471)	ENSAOCG00000000937	ENSAOCG00000014401 ##22	CH25H (ENSAOCG00000014377)
Bicolor damselfish	MODERN SPECIES	707													papss2a (ENSSPAG00000014903)	ENSSPAG00000014938	ENSSPAG00000015002	ENSSPAG00000015013 ##22	CH25H (ENSSPAG00000015028)	itprip (ENSSPAG00000015041)	gsto2 (ENSSPAG00000015060)	ENSSPAG00000015094	sfr1 (ENSSPAG00000015114)	ENSSPAG00000015121	slka (ENSSPAG00000015159)	SH3PXD2A (ENSSPAG00000015203)	ENSSPAG00000015302	ENSSPAG00000015384	ENSSPAG00000016377
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e	ENSGT00940000174603	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.d	ENSGT00940000163896.e.c	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.d	ENSGT00940000163896.e.c	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Indian medaka	MODERN SPECIES	27	polh (ENSOMEG00000005622)	GTPBP2 (ENSOMEG00000005661)	OTOR (ENSOMEG00000005674)	pcsk2 (ENSOMEG00000005740)	BFSP1 (ENSOMEG00000005772)	prokr1b (ENSOMEG00000005788)	plek (ENSOMEG00000005838)	pcdh15a (ENSOMEG00000006053)	ENSOMEG00000006102	prkg1a (ENSOMEG00000006154)	ENSOMEG00000000989	sgms1a (ENSOMEG00000006190)	minpp1a (ENSOMEG00000006206)	papss2a (ENSOMEG00000006234)	ENSOMEG00000006286	ENSOMEG00000006331 ##22	itprip (ENSOMEG00000006351)	ENSOMEG00000006363	ENSOMEG00000006381	ENSOMEG00000006410	sfr1 (ENSOMEG00000006416)	ENSOMEG00000006444	slka (ENSOMEG00000006498)	ENSOMEG00000006511	SH3PXD2A (ENSOMEG00000006545)	ENSOMEG00000000153	ENSOMEG00000007185	ENSOMEG00000007448	add3b (ENSOMEG00000007497)	ENSOMEG00000007548	smndc1 (ENSOMEG00000007590)
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000022040	GTPBP2 (ENSOJAG00000022002)	OTOR (ENSOJAG00000021983)	pcsk2 (ENSOJAG00000021835)	BFSP1 (ENSOJAG00000021760)	prokr1b (ENSOJAG00000021753)	ENSOJAG00000021751	plek (ENSOJAG00000021739)	pcdh15a (ENSOJAG00000020054)	ENSOJAG00000019796	prkg1a (ENSOJAG00000019452)	sgms1a (ENSOJAG00000019381)	minpp1a (ENSOJAG00000019373)	papss2a (ENSOJAG00000018936)	ENSOJAG00000018846	ENSOJAG00000018829 ##22	itprip (ENSOJAG00000018821)	ENSOJAG00000018797	ENSOJAG00000018761	sfr1 (ENSOJAG00000018755)	ENSOJAG00000018745	SH3PXD2A (ENSOJAG00000018557)	ENSOJAG00000018546	ENSOJAG00000017531	ENSOJAG00000017156	add3b (ENSOJAG00000016371)	MXI1 (ENSOJAG00000016289)	smndc1 (ENSOJAG00000016276)	ADRA2A (ENSOJAG00000016250)	bnip3 (ENSOJAG00000016235)	ppp2r2d (ENSOJAG00000015857)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00950000182977.B.b.b.b	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.d	ENSGT00940000163896.e.c	ENSGT00940000174603	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B
Japanese Medaka HdrR	MODERN SPECIES	6	polh (ENSORLG00000006526)	ENSORLG00000006506	OTOR (ENSORLG00000023881)	pcsk2 (ENSORLG00000006472)	BFSP1 (ENSORLG00000006395)	prokr1b (ENSORLG00000006384)	plek (ENSORLG00000006378)	pcdh15a (ENSORLG00000023071)	dkk1a (ENSORLG00000006345)	ENSORLG00000026993	prkg1 (ENSORLG00000006327)	sgms1a (ENSORLG00000006277)	minpp1a (ENSORLG00000006259)	papss2a (ENSORLG00000006251)	ENSORLG00000006231	fas (ENSORLG00000006217) ##22	itprip (ENSORLG00000006205)	ENSORLG00000025328	ENSORLG00000006192	CFAP43 (ENSORLG00000006175)	sfr1 (ENSORLG00000028771)	ENSORLG00000021987	slka (ENSORLG00000006110)	SH3PXD2A (ENSORLG00000006049)	ENSORLG00000006034	ENSORLG00000006025	ENSORLG00000006009	add3b (ENSORLG00000006001)	MXI1 (ENSORLG00000005955)	smndc1 (ENSORLG00000005934)	ENSORLG00000005919
Chinese medaka	MODERN SPECIES	557	vdac2 (ENSOSIG00000016393)	ENSOSIG00000016386	ENSOSIG00000016383	GTPBP2 (ENSOSIG00000016382)	OTOR (ENSOSIG00000016381)	pcsk2 (ENSOSIG00000016107)	BFSP1 (ENSOSIG00000016100)	prokr1b (ENSOSIG00000016099)	pcdh15a (ENSOSIG00000014258)	dkk1a (ENSOSIG00000014247)	prkg1a (ENSOSIG00000014035)	sgms1a (ENSOSIG00000014019)	minpp1a (ENSOSIG00000014016)	papss2a (ENSOSIG00000010713)	ENSOSIG00000010676	ENSOSIG00000010675 ##22	itprip (ENSOSIG00000010674)	ENSOSIG00000010673	ENSOSIG00000010671	sfr1 (ENSOSIG00000010670)	ENSOSIG00000010668	slka (ENSOSIG00000010586)	SH3PXD2A (ENSOSIG00000010570)	ENSOSIG00000010567	ENSOSIG00000010179	add3b (ENSOSIG00000009048)	MXI1 (ENSOSIG00000009032)	smndc1 (ENSOSIG00000009027)	ADRA2A (ENSOSIG00000009026)	bnip3 (ENSOSIG00000009024)	ppp2r2d (ENSOSIG00000008737)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e	ENSGT00940000174603	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.a	ENSGT00940000163896.e.b	ENSGT00940000174603	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00530000067963	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.a	ENSGT00940000163896.e.b	ENSGT00940000174603	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000168136	ENSGT00940000166749	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b
Poecilia	ANCESTRAL SPECIES	11	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00530000067963	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.a	ENSGT00940000163896.e.b	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000168136	ENSGT00940000166749	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b
NAME_6	ANCESTRAL SPECIES	34	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000163896.e.a	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.b	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550.j	ENSGT00940000166749	ENSGT00940000174603	ENSGT00390000018550.i	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b
Sailfin molly	MODERN SPECIES	251									ENSPLAG00000012250	prkg1a (ENSPLAG00000012238)	sgms1a (ENSPLAG00000012190)	ENSPLAG00000012153	minpp1a (ENSPLAG00000012085)	papss2a (ENSPLAG00000012072)	ENSPLAG00000012040	ENSPLAG00000011993 ##22	ENSPLAG00000011977	itprip (ENSPLAG00000011971)	ENSPLAG00000011969	ENSPLAG00000011946	ENSPLAG00000011787	sfr1 (ENSPLAG00000011766)	ENSPLAG00000011760	slka (ENSPLAG00000011750)	SH3PXD2A (ENSPLAG00000011702)	ENSPLAG00000011477	ENSPLAG00000011468	ENSPLAG00000011413	ENSPLAG00000010745	add3b (ENSPLAG00000010399)	MXI1 (ENSPLAG00000010381)
Amazon molly	MODERN SPECIES	264	GTPBP2 (ENSPFOG00000014861)	OTOR (ENSPFOG00000014922)	pcsk2 (ENSPFOG00000014946)	BFSP1 (ENSPFOG00000015020)	plek (ENSPFOG00000015043)	plek (ENSPFOG00000015061)	pcdh15a (ENSPFOG00000015117)	ENSPFOG00000023741	dkk1a (ENSPFOG00000015502)	prkg1a (ENSPFOG00000015530)	sgms1a (ENSPFOG00000015619)	ENSPFOG00000015635	ENSPFOG00000015642	papss2a (ENSPFOG00000015662)	ENSPFOG00000015747	ENSPFOG00000015770 ##22	ENSPFOG00000015790	itprip (ENSPFOG00000015820)	ENSPFOG00000024219	CFAP43 (ENSPFOG00000015825)	sfr1 (ENSPFOG00000015904)	ENSPFOG00000015924	slka (ENSPFOG00000016103)	SH3PXD2A (ENSPFOG00000016214)	ENSPFOG00000022161	ENSPFOG00000016270	ENSPFOG00000016303	ENSPFOG00000016663	add3b (ENSPFOG00000016965)	MXI1 (ENSPFOG00000017086)	smndc1 (ENSPFOG00000017113)
Platyfish	MODERN SPECIES	14	vdac2 (ENSXMAG00000010569)	ENSXMAG00000010577	polh (ENSXMAG00000010580)	GTPBP2 (ENSXMAG00000010601)	OTOR (ENSXMAG00000028311)	pcsk2 (ENSXMAG00000010620)	BFSP1 (ENSXMAG00000028704)	plek (ENSXMAG00000010640)	pcdh15a (ENSXMAG00000010653)	ENSXMAG00000025380	prkg1a (ENSXMAG00000010661)	sgms1a (ENSXMAG00000028907)	minpp1a (ENSXMAG00000012975)	papss2a (ENSXMAG00000012962)	ENSXMAG00000012957	ENSXMAG00000021079 ##22	ENSXMAG00000012943	itprip (ENSXMAG00000019485)	ENSXMAG00000012942	ENSXMAG00000012941	ENSXMAG00000012933	sfr1 (ENSXMAG00000012931)	ENSXMAG00000012914	slka (ENSXMAG00000012897)	ENSXMAG00000024181	ENSXMAG00000026759	SH3PXD2A (ENSXMAG00000007295)	ENSXMAG00000007301	ENSXMAG00000012867	ENSXMAG00000012795	add3b (ENSXMAG00000012762)
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000158306	ENSGT00390000018409.h.z	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.e.a	ENSGT00940000163896.e.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b.d	ENSGT00940000155809.p	ENSGT00940000153352.B
Mummichog	MODERN SPECIES	2506								pcdh15a (ENSFHEG00000001942)	dkk1a (ENSFHEG00000001963)	prkg1a (ENSFHEG00000001989)	sgms1a (ENSFHEG00000002004)	minpp1a (ENSFHEG00000002052)	minpp1a (ENSFHEG00000002062)	papss2a (ENSFHEG00000002072)	PTEN (ENSFHEG00000002080)	ENSFHEG00000002106 ##22	itprip (ENSFHEG00000002110)	ENSFHEG00000002116	ENSFHEG00000000059	ENSFHEG00000000062	ENSFHEG00000002143	sfr1 (ENSFHEG00000002151)	ENSFHEG00000002158	slka (ENSFHEG00000002183)	ENSFHEG00000002189	SH3PXD2A (ENSFHEG00000002198)	ENSFHEG00000002213
Sheepshead minnow	MODERN SPECIES	113	OTOR (ENSCVAG00000016387)	pcsk2 (ENSCVAG00000016395)	BFSP1 (ENSCVAG00000016403)	prokr1b (ENSCVAG00000016414)	plek (ENSCVAG00000016472)	pcdh15a (ENSCVAG00000018351)	dkk1a (ENSCVAG00000018393)	prkg1a (ENSCVAG00000018443)	PRKG1 (ENSCVAG00000018457)	ENSCVAG00000018463	sgms1a (ENSCVAG00000018488)	ENSCVAG00000018496	minpp1a (ENSCVAG00000018505)	papss2a (ENSCVAG00000018533)	ENSCVAG00000018544	ENSCVAG00000018561 ##22	itprip (ENSCVAG00000018569)	ENSCVAG00000018586	ENSCVAG00000018594	sfr1 (ENSCVAG00000018620)
Aplocheiloidei	ANCESTRAL SPECIES	22	ENSGT00940000176967	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965	ENSGT00390000016976	ENSGT00940000166657	ENSGT00940000157885	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00940000158306	ENSGT00390000018409.h.y	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896.f	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000156184.b	ENSGT00940000159134.r.a.b.a	ENSGT00940000157732.f.b	ENSGT00940000156696.A	ENSGT01030000234563.b.a.b.a.b.b	ENSGT01030000234563.b.a.b.a.a.c.b	ENSGT00940000155257.b.b	ENSGT00940000155809.p	ENSGT00940000153352.B	ENSGT00940000161451.a.b
Mangrove rivulus	MODERN SPECIES	3	ENSKMAG00000018959	polh (ENSKMAG00000018975)	GTPBP2 (ENSKMAG00000019007)	OTOR (ENSKMAG00000019055)	pcsk2 (ENSKMAG00000019075)	BFSP1 (ENSKMAG00000019099)	prokr1b (ENSKMAG00000019117)	plek (ENSKMAG00000019135)	pcdh15a (ENSKMAG00000019219)	dkk1a (ENSKMAG00000019456)	prkg1a (ENSKMAG00000019480)	sgms1a (ENSKMAG00000019544)	minpp1a (ENSKMAG00000019573)	papss2a (ENSKMAG00000019585)	ENSKMAG00000019618	ENSKMAG00000019644 ##22	ENSKMAG00000019683	itprip (ENSKMAG00000019756)	ENSKMAG00000019764	sfr1 (ENSKMAG00000019791)	ENSKMAG00000019802	slka (ENSKMAG00000019833)	ENSKMAG00000019883	SH3PXD2A (ENSKMAG00000019906)	ENSKMAG00000019976	ENSKMAG00000019991	ENSKMAG00000020026	ENSKMAG00000020057	add3b (ENSKMAG00000020087)	MXI1 (ENSKMAG00000020122)	smndc1 (ENSKMAG00000020134)
Turquoise killifish	MODERN SPECIES	1612	pcsk2 (ENSNFUG00015016886)	BFSP1 (ENSNFUG00015017708)	CU929052.1 (ENSNFUG00015017712)	plek (ENSNFUG00015017717)	ENSNFUG00015017724	pcdh15a (ENSNFUG00015017933)	ENSNFUG00015021867	ENSNFUG00015021871	DKK1A (ENSNFUG00015021873)	PRKG1A (ENSNFUG00015021893)	SGMS1 (ENSNFUG00015021979)	ENSNFUG00015021985	MINPP1A (ENSNFUG00015021987)	PAPSS2 (ENSNFUG00015022029)	Nfu_g_1_002795 (ENSNFUG00015022516)	FAS (ENSNFUG00015022539) ##22	ppifa (ENSNFUG00015022549)	ZCCHC24 (ENSNFUG00015022554)	anxa11a (ENSNFUG00015022573)	DLG5A (ENSNFUG00015022897)	ENSNFUG00015023481	KCNMA1 (ENSNFUG00015023512)	lrmda (ENSNFUG00015023874)	tcea3 (ENSNFUG00015023905)	OPRD1B (ENSNFUG00015023936)	ENSNFUG00015023938	comtd1 (ENSNFUG00015023943)	ENSNFUG00015023949	VDAC2 (ENSNFUG00015023972)	ENSNFUG00015024057	ENSNFUG00015024060
Cod	MODERN SPECIES	6	ENSGMOG00000012651	ENSGMOG00000012655	OTOR (ENSGMOG00000012658)	pcsk2 (ENSGMOG00000012662)	BFSP1 (ENSGMOG00000036269)	prokr1b (ENSGMOG00000012667)	ENSGMOG00000025161	plek (ENSGMOG00000019204)	pcdh15a (ENSGMOG00000001305)	ENSGMOG00000029733	prkg1a (ENSGMOG00000025236)	sgms1a (ENSGMOG00000036184)	minpp1a (ENSGMOG00000011756)	papss2a (ENSGMOG00000011763)	ptena (ENSGMOG00000032805)	ENSGMOG00000034043 ##22	ENSGMOG00000025368	nt5c2a (ENSGMOG00000016201)	ENSGMOG00000011257	borcs7 (ENSGMOG00000011250)	cyp17a1 (ENSGMOG00000011243)	ENSGMOG00000004318	fbxw4 (ENSGMOG00000015043)	fgf8a (ENSGMOG00000015070)	slc2a15a (ENSGMOG00000016589)	ENSGMOG00000016612	tlx1 (ENSGMOG00000014671)	ENSGMOG00000027921	cep68 (ENSGMOG00000032092)	ENSGMOG00000004888	zgc:153169 (ENSGMOG00000036949)
Protacanthopterygii	ANCESTRAL SPECIES	126	ENSGT00950000183100.C	ENSGT00390000013481.c.b.a	ENSGT00550000074867	ENSGT00530000063425.a.a.a.b	ENSGT00940000158952	ENSGT00940000154292.a.a	ENSGT00940000155309	ENSGT00940000156675.d	ENSGT00940000165723.a	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154710.a.a	ENSGT00940000162142.d	ENSGT00950000182946.mb	ENSGT00940000156169.a.a	ENSGT00940000157373.k	ENSGT01010000222287.B.a.a.a.a.a.b	ENSGT00940000155989.d
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	74	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965.e	ENSGT00390000016976.e	ENSGT00940000166657.a.a	ENSGT00940000157885.g	ENSGT00940000156675.c.b	ENSGT00440000038232	ENSGT00940000165723.b.e	ENSGT00940000154704.d.b.z.a.b	ENSGT00940000158306.f	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a.a	ENSGT00950000183126.b.b.c ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b.a	ENSGT00950000182946.lb.b.k.b.b.a	ENSGT01050000244827.D.b.b.a	ENSGT00950000182946.lb.b.k.b.b.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.a.f.a	ENSGT00940000156696.A.a	ENSGT01030000234563.b.a.b.a.b.b.d	ENSGT01030000234563.b.a.b.a.a.c.b.a	ENSGT00940000155257.b.b.a
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00950000182977.B.b.b.c.a.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965.e	ENSGT00390000016976.e	ENSGT00940000166657.a.a	ENSGT00940000157885.g	ENSGT00940000156675.c.b	ENSGT00940000165723.b.e	ENSGT00940000154704.d.b.z.a.b	ENSGT00940000158306.f	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a.a	ENSGT00950000183126.b.b.c ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b.a	ENSGT00950000182946.lb.b.k.b.b.a	ENSGT01050000244827.D.b.b.a	ENSGT00950000182946.lb.b.k.b.b.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.a.f.a	ENSGT00940000156696.A.a	ENSGT01030000234563.b.a.b.a.b.b.d	ENSGT01030000234563.b.a.b.a.a.c.b.a	ENSGT00940000155257.b.b.a
Salmo	ANCESTRAL SPECIES	29	ENSGT00950000182977.B.b.b.c.a.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965.e	ENSGT00390000016976.e	ENSGT00940000166657.a.a	ENSGT00940000157885.g	ENSGT00940000156675.c.b	ENSGT00940000165723.b.e	ENSGT00940000154704.d.b.z.a.b	ENSGT00940000158306.f	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000163053.c.a.a	ENSGT00950000183126.b.b.c ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b.a	ENSGT00950000182946.lb.b.k.b.b.a.a	ENSGT01050000244827.D.b.b.a	ENSGT00950000182946.lb.b.k.b.b.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000156184.b	ENSGT00940000157732.f.a.f.a	ENSGT00940000156696.A.a	ENSGT01030000234563.b.a.b.a.b.b.d	ENSGT01030000234563.b.a.b.a.a.c.b.a	ENSGT00940000155257.b.b.a	ENSGT00940000155809.p.b	ENSGT00940000153352.B.q
River trout	MODERN SPECIES	35	polh (ENSSTUG00000022316)	GTPBP2 (ENSSTUG00000022058)	OTOR (ENSSTUG00000022026)	pcsk2 (ENSSTUG00000021751)	BFSP1 (ENSSTUG00000021711)	prokr1b (ENSSTUG00000021707)	plek (ENSSTUG00000021604)	pcdh15a (ENSSTUG00000020343)	dkk1a (ENSSTUG00000020223)	prkg1a (ENSSTUG00000019872)	sgms1a (ENSSTUG00000019853)	minpp1a (ENSSTUG00000019847)	papss2a (ENSSTUG00000019186)	ENSSTUG00000018972	ENSSTUG00000018961	ENSSTUG00000018950 ##22	CH25H (ENSSTUG00000018944)	ENSSTUG00000018935	ENSSTUG00000018927	ENSSTUG00000018907	ENSSTUG00000018903	ENSSTUG00000018887	CFAP43 (ENSSTUG00000018860)	sfr1 (ENSSTUG00000018849)	ENSSTUG00000018724	slka (ENSSTUG00000018393)	SH3PXD2A (ENSSTUG00000018345)	ENSSTUG00000018337	ENSSTUG00000018333	ENSSTUG00000018293	ENSSTUG00000018271
Atlantic salmon	MODERN SPECIES	9	polh (ENSSSAG00000078229)	gtpbp2 (ENSSSAG00000078243)	OTOR (ENSSSAG00000078279)	pcsk2 (ENSSSAG00000078294)	BFSP1 (ENSSSAG00000111914)	prokr1b (ENSSSAG00000078352)	plek (ENSSSAG00000084901)	pcdh15a (ENSSSAG00000078448)	ENSSSAG00000120971	prkg1a (ENSSSAG00000078684)	ENSSSAG00000086691 ##9	sgms1a (ENSSSAG00000078700)	minpp1a (ENSSSAG00000078704)	papss2a (ENSSSAG00000078725)	ENSSSAG00000078911	ENSSSAG00000086657 ##22	ENSSSAG00000101544	ENSSSAG00000099660	itprip (ENSSSAG00000078938)	ENSSSAG00000106305	cfap43 (ENSSSAG00000078942)	SFR1 (ENSSSAG00000094448)	col17a1 (ENSSSAG00000078949)	slk (ENSSSAG00000078992)	sh3pxd2a (ENSSSAG00000079264)	ENSSSAG00000091704	ENSSSAG00000079323	ENSSSAG00000079462	add3 (ENSSSAG00000079674)	MXI1 (ENSSSAG00000097086)	smndc1 (ENSSSAG00000101214)
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00950000182977.B.b.b.c.a.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965.e	ENSGT00390000016976.e	ENSGT00940000166657.a.a	ENSGT00940000157885.g	ENSGT00940000156675.c.b	ENSGT00940000165723.b.e	ENSGT00940000154704.d.b.z.a.b	ENSGT00940000158306.f	ENSGT00390000018409.h	ENSGT00970000196860.C	ENSGT00940000163053.c.a.a	ENSGT00950000183126.b.b.c ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b.a	ENSGT00950000182946.lb.b.k.b.b.a	ENSGT01050000244827.D.b.b.a	ENSGT00950000182946.lb.b.k.b.b.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.a.f.a	ENSGT00940000156696.A.a	ENSGT01030000234563.b.a.b.a.b.b.d	ENSGT01030000234563.b.a.b.a.a.c.b.a	ENSGT00940000155257.b.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00950000182977.B.b.b.c.a.b.a	ENSGT00940000157048	ENSGT00940000155636.b.b	ENSGT00950000182767.b.a.b.b.a	ENSGT00940000156965.e	ENSGT00390000016976.e	ENSGT00940000166657.a.a	ENSGT00940000157885.g	ENSGT00940000156675.c.b	ENSGT00940000165723.b.e	ENSGT00940000154704.d.b.z.a.b	ENSGT00940000158306.f	ENSGT00390000018409.h	ENSGT00970000196860.C	ENSGT00940000163053.c.a.a	ENSGT00950000183126.b.b.c ##22	ENSGT00940000162142.c	ENSGT00950000182946.lb.b.k.b.a	ENSGT00950000182946.lb.b.k.b.b.a	ENSGT01050000244827.D.b.b.a	ENSGT00950000182946.lb.b.k.b.b.b	ENSGT00530000064714	ENSGT00390000018550	ENSGT00940000177016	ENSGT00940000168136	ENSGT00940000156184.b	ENSGT00940000157732.f.a.f.a	ENSGT00940000156696.A.a	ENSGT01030000234563.b.a.b.a.b.b.d	ENSGT01030000234563.b.a.b.a.a.c.b.a	ENSGT00940000155257.b.b.a
Coho salmon	MODERN SPECIES	24	polh (ENSOKIG00005043643)	GTPBP2 (ENSOKIG00005043705)	OTOR (ENSOKIG00005043795)	pcsk2 (ENSOKIG00005043849)	BFSP1 (ENSOKIG00005044107)	prokr1b (ENSOKIG00005044133)	plek (ENSOKIG00005044157)	pcdh15a (ENSOKIG00005044552)	ENSOKIG00005047739	prkg1a (ENSOKIG00005047758)	sgms1a (ENSOKIG00005047834)	minpp1a (ENSOKIG00005047840)	ENSOKIG00005047847	papss2a (ENSOKIG00005047914)	ENSOKIG00005048159	ENSOKIG00005048243 ##22	CH25H (ENSOKIG00005048249)	ENSOKIG00005048258	ENSOKIG00005048265	itprip (ENSOKIG00005048273)	ENSOKIG00005048277	CFAP43 (ENSOKIG00005048279)	sfr1 (ENSOKIG00005048290)	ENSOKIG00005048297	slka (ENSOKIG00005048329)	SH3PXD2A (ENSOKIG00005048475)	ENSOKIG00005048509	ENSOKIG00005048544	ENSOKIG00005048662	ADD3 (ENSOKIG00005048783)	MXI1 (ENSOKIG00005049130)
Chinook salmon	MODERN SPECIES	30	polh (ENSOTSG00005020678)	GTPBP2 (ENSOTSG00005020686)	OTOR (ENSOTSG00005020694)	pcsk2 (ENSOTSG00005020701)	BFSP1 (ENSOTSG00005021377)	ENSOTSG00005021381	prokr1b (ENSOTSG00005021384)	plek (ENSOTSG00005021393)	pcdh15a (ENSOTSG00005021655)	dkk1a (ENSOTSG00005022204)	prkg1a (ENSOTSG00005022207)	sgms1a (ENSOTSG00005022224)	minpp1a (ENSOTSG00005022226)	papss2a (ENSOTSG00005022246)	ENSOTSG00005027396	ENSOTSG00005027404 ##22	ENSOTSG00005027411	ENSOTSG00005027413	ENSOTSG00005027417	RIMS1 (ENSOTSG00005027430)	asrgl1 (ENSOTSG00005027432)	asrgl1 (ENSOTSG00005027434)	b3gat2 (ENSOTSG00005027437)	CH25H (ENSOTSG00005027438)	ENSOTSG00005027439	ENSOTSG00005027440	itprip (ENSOTSG00005027441)	ENSOTSG00005027442	CFAP43 (ENSOTSG00005027443)	sfr1 (ENSOTSG00005027447)	ENSOTSG00005027448
Rainbow trout	MODERN SPECIES		ENSOMYG00000000848	OTOR (ENSOMYG00000000893)	pcsk2 (ENSOMYG00000001009)	ENSOMYG00000051230	BFSP1 (ENSOMYG00000001157)	prokr1b (ENSOMYG00000001241)	plek (ENSOMYG00000001201)	pcdh15a (ENSOMYG00000002824)	ENSOMYG00000073842	prkg1a (ENSOMYG00000004666)	sgms1a (ENSOMYG00000004754)	minpp1a (ENSOMYG00000004762)	ENSOMYG00000052931	papss2a (ENSOMYG00000005139)	ENSOMYG00000005675	ENSOMYG00000005825 ##22	ENSOMYG00000005842	ENSOMYG00000057011	ENSOMYG00000005879	ENSOMYG00000005913	ENSOMYG00000055163	CFAP43 (ENSOMYG00000065286)	SFR1 (ENSOMYG00000006047)	ENSOMYG00000006268	SLK (ENSOMYG00000008818)	SH3PXD2A (ENSOMYG00000014571)	ENSOMYG00000014740	ENSOMYG00000014856	ENSOMYG00000015268	ADD3 (ENSOMYG00000016648)	MXI1 (ENSOMYG00000019345)
Salmoninae	ANCESTRAL SPECIES	930															ENSGT00940000163053.c.a.b	ENSGT00950000183126.b.b.d ##22	ENSGT00940000155351	ENSGT00940000157732.f.a.f.b	ENSGT00940000156696.A.b	ENSGT01030000234563.b.a.b.a.b.b.c	ENSGT01030000234563.b.a.b.a.a.c.b.b
Huchen	MODERN SPECIES	612													PRKG1 (ENSHHUG00000030582)	ENSHHUG00000030589	ENSHHUG00000030591	ENSHHUG00000030648 ##22	gsto2 (ENSHHUG00000030661)	SH3PXD2A (ENSHHUG00000030676)	ENSHHUG00000030722	ENSHHUG00000030727
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000156983.a.b.a.a	ENSGT00940000155134.y.e	ENSGT00390000018730.B.e	ENSGT00940000159583.g	ENSGT00940000155884.a.c.a.b	ENSGT00940000153463.b.a.d	ENSGT00940000154308.D.c.a.b.a.b.a.b.b.b	ENSGT00940000156965.f	ENSGT00390000016976.f	ENSGT00940000166657.a.b	ENSGT00940000157885.h	ENSGT00940000156675.c.a	ENSGT00940000165723.b.f	ENSGT00940000154704.d.b.z.a.a	ENSGT00940000163053.c.a.b	ENSGT00950000183126.b.b.d ##22	ENSGT00940000155351	ENSGT00940000157732.f.a.f.b	ENSGT00940000156696.A.b	ENSGT01030000234563.b.a.b.a.b.b.c	ENSGT01030000234563.b.a.b.a.a.c.b.b	ENSGT00940000155257.b.b.b	ENSGT00940000155809.p.a	ENSGT00940000153352.B.r	ENSGT00940000161451.a.b.b	ENSGT00950000182864.a.a.s.b.b	ENSGT00950000182859.A.b.eb.b.a	ENSGT00990000211460	ENSGT00390000009274.d	ENSGT00940000156570.b.h	ENSGT00530000063787.B.d.b.d
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000156983.a.b.a.a	ENSGT00940000155134.y.e	ENSGT00390000018730.B.e	ENSGT00940000159583.g	ENSGT00940000155884.a.c.a.b	ENSGT00940000153463.b.a.d	ENSGT00940000154308.D.c.a.b.a.b.a.b.b.b	ENSGT00940000156965.f	ENSGT00390000016976.f	ENSGT00940000166657.a.b	ENSGT00940000157885.h	ENSGT00940000156675.c.a	ENSGT00940000165723.b.f	ENSGT00940000154704.d.b.z.a.a	ENSGT00940000163053.c.a.b	ENSGT00950000183126.b.b.d ##22	ENSGT00940000155351	ENSGT00940000157732.f.a.f.b	ENSGT00940000156696.A.b	ENSGT01030000234563.b.a.b.a.b.b.c	ENSGT01030000234563.b.a.b.a.a.c.b.b	ENSGT00940000155257.b.b.b	ENSGT00940000155809.p.a	ENSGT00940000153352.B.r	ENSGT00940000161451.a.b.b	ENSGT00950000182864.a.a.s.b.b	ENSGT00950000182859.A.b.eb.b.a	ENSGT00990000211460	ENSGT00390000009274.d	ENSGT00940000156570.b.h	ENSGT00530000063787.B.d.b.d
River trout	MODERN SPECIES	9	OGFRL1 (ENSSTUG00000046108)	b3gat2 (ENSSTUG00000046114)	smap1 (ENSSTUG00000046128)	ENSSTUG00000046168	tp53bp2a (ENSSTUG00000046187)	ENSSTUG00000046347	ENSSTUG00000034366	pcsk2 (ENSSTUG00000034389)	BFSP1 (ENSSTUG00000034828)	prokr1b (ENSSTUG00000034846)	plek (ENSSTUG00000034859)	pcdh15a (ENSSTUG00000035001)	dkk1a (ENSSTUG00000036729)	prkg1a (ENSSTUG00000036738)	ENSSTUG00000036883	ENSSTUG00000036954 ##22	gsto2 (ENSSTUG00000036974)	SH3PXD2A (ENSSTUG00000037012)	ENSSTUG00000037276	ENSSTUG00000037280	ENSSTUG00000037281 #31	ENSSTUG00000037285	ENSSTUG00000037295	add3b (ENSSTUG00000037470)	MXI1 (ENSSTUG00000038544)	smndc1 (ENSSTUG00000038554)	ADRA2A (ENSSTUG00000038577)	ENSSTUG00000038588	ebf3a (ENSSTUG00000038637)	ENSSTUG00000038953	ENSSTUG00000038962
Atlantic salmon	MODERN SPECIES		b3gat2 (ENSSSAG00000097600)	smap1 (ENSSSAG00000075322)	ENSSSAG00000075352	ENSSSAG00000096800	pcsk2 (ENSSSAG00000075458)	ENSSSAG00000075627	prokr1b (ENSSSAG00000075633)	plek (ENSSSAG00000075635)	ENSSSAG00000119752	pcdh15a (ENSSSAG00000075648)	ENSSSAG00000075892	ENSSSAG00000111092 ##29	prkg1a (ENSSSAG00000075912)	ENSSSAG00000076313	ENSSSAG00000105461	tnr6 (ENSSSAG00000076338) ##22	ENSSSAG00000076348	ENSSSAG00000110896	ENSSSAG00000076392	ENSSSAG00000076406	ENSSSAG00000076859	ADD3 (ENSSSAG00000077178)	MXI1 (ENSSSAG00000102877)	smndc1 (ENSSSAG00000078055)	ENSSSAG00000078071	ENSSSAG00000079931	ENSSSAG00000078355	ENSSSAG00000078927	ENSSSAG00000078988	ENSSSAG00000115450	ENSSSAG00000079832
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000157361.b.f	ENSGT00940000158042.j	ENSGT00940000156983.a.b.a.a	ENSGT00940000155134.y.e	ENSGT00390000018730.B.e	ENSGT00940000159583.g	ENSGT00940000153463.b.a.d	ENSGT00940000154308.D.c.a.b.a.b.a.b.b.b	ENSGT00940000156965.f	ENSGT00390000016976.f	ENSGT00940000157885.h	ENSGT00940000156675.c.a	ENSGT00940000165723.b.f	ENSGT00940000154704.d.b.z.a.a	ENSGT00940000163053.c.a.b	ENSGT00950000183126.b.b.d ##22	ENSGT00940000155351	ENSGT00940000157732.f.a.f.b	ENSGT00940000156696.A.b	ENSGT01030000234563.b.a.b.a.b.b.c	ENSGT01030000234563.b.a.b.a.a.c.b.b	ENSGT00940000155257.b.b.b	ENSGT00940000155809.p.a	ENSGT00940000153352.B.r	ENSGT00940000161451.a.b.b	ENSGT00950000182864.a.a.s.b.b	ENSGT00950000182859.A.b.eb.b.a	ENSGT00990000211460	ENSGT00390000009274.d	ENSGT00940000156570.b.h	ENSGT00530000063787.B.d.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000157361.b.f	ENSGT00940000158042.j	ENSGT00940000156983.a.b.a.a	ENSGT00940000155134.y.e	ENSGT00390000018730.B.e	ENSGT00940000159583.g	ENSGT00940000153463.b.a.d	ENSGT00940000154308.D.c.a.b.a.b.a.b.b.b	ENSGT00940000156965.f	ENSGT00390000016976.f	ENSGT00940000157885.h	ENSGT00940000156675.c.a	ENSGT00940000165723.b.f	ENSGT00940000154704.d.b.z.a.a	ENSGT00940000163053.c.a.b	ENSGT00950000183126.b.b.d ##22	ENSGT00940000155351	ENSGT00940000157732.f.a.f.b	ENSGT00940000156696.A.b	ENSGT01030000234563.b.a.b.a.b.b.c	ENSGT01030000234563.b.a.b.a.a.c.b.b	ENSGT00940000155257.b.b.b	ENSGT00940000155809.p.a	ENSGT00940000153352.B.r	ENSGT00940000161451.a.b.b	ENSGT00950000182864.a.a.s.b.b	ENSGT00950000182859.A.b.eb.b.a	ENSGT00990000211460	ENSGT00390000009274.d	ENSGT00940000156570.b.h	ENSGT00530000063787.B.d.b.d
Chinook salmon	MODERN SPECIES		ENSOTSG00005023853	ENSOTSG00005023854	ENSOTSG00005023856	ENSOTSG00005023858	ENSOTSG00005023861	b3gat2 (ENSOTSG00005023864)	tp53bp2a (ENSOTSG00005023869)	ENSOTSG00005000055	pcsk2 (ENSOTSG00005000145)	BFSP1 (ENSOTSG00005000150)	plek (ENSOTSG00005000169)	pcdh15a (ENSOTSG00005000208)	dkk1a (ENSOTSG00005000215)	prkg1a (ENSOTSG00005000227)	ENSOTSG00005000271	ENSOTSG00005000284 ##22	gsto2 (ENSOTSG00005000285)	SH3PXD2A (ENSOTSG00005000288)	ENSOTSG00005000292	ENSOTSG00005000295	ENSOTSG00005000305	add3b (ENSOTSG00005000666)	MXI1 (ENSOTSG00005000676)	smndc1 (ENSOTSG00005000677)	ADRA2A (ENSOTSG00005000681)	PPP2R2D (ENSOTSG00005000684)	ebf3a (ENSOTSG00005000694)	ENSOTSG00005001622	ENSOTSG00005001624	ptpreb (ENSOTSG00005001675)	INSYN2A (ENSOTSG00005009289)
Coho salmon	MODERN SPECIES	2	vrk2 (ENSOKIG00005041239)	ENSOKIG00005041192	RIMS1 (ENSOKIG00005038258)	OGFRL1 (ENSOKIG00005037810)	b3gat2 (ENSOKIG00005037776)	TP53BP2 (ENSOKIG00005037634)	ENSOKIG00005037613	pcsk2 (ENSOKIG00005037109)	BFSP1 (ENSOKIG00005037024)	plek (ENSOKIG00005036783)	pcdh15a (ENSOKIG00005032623)	ENSOKIG00005032467	prkg1a (ENSOKIG00005032319)	ENSOKIG00005032130	ENSOKIG00005046464	ENSOKIG00005046455 ##22	gsto2 (ENSOKIG00005046442)	SH3PXD2A (ENSOKIG00005046388)	ENSOKIG00005046375	ENSOKIG00005046358	ENSOKIG00005045985	add3b (ENSOKIG00005045829)	smndc1 (ENSOKIG00005045788)	ADRA2A (ENSOKIG00005045779)	PPP2R2D (ENSOKIG00005045761)	EBF3 (ENSOKIG00005045654)	ENSOKIG00005045621	gnrh3 (ENSOKIG00005045611)	ENSOKIG00005041788	ENSOKIG00005041485	INSYN2A (ENSOKIG00005041471)
Rainbow trout	MODERN SPECIES	15	RIMS1 (ENSOMYG00000040144)	ENSOMYG00000063780	ENSOMYG00000050267	ENSOMYG00000040160	b3gat2 (ENSOMYG00000040179)	ENSOMYG00000040241	ENSOMYG00000040278	pcsk2 (ENSOMYG00000040378)	ENSOMYG00000040696	plek (ENSOMYG00000040730)	pcdh15a (ENSOMYG00000040834)	ENSOMYG00000040945	prkg1a (ENSOMYG00000040984)	ENSOMYG00000041040	ENSOMYG00000034708	ENSOMYG00000041155 ##22	gsto1 (ENSOMYG00000041164)	ENSOMYG00000041177	ENSOMYG00000057461	ENSOMYG00000041197	ENSOMYG00000041211	ENSOMYG00000041226	ADD3 (ENSOMYG00000041276)	MXI1 (ENSOMYG00000041329)	smndc1 (ENSOMYG00000041334)	ENSOMYG00000052062	ENSOMYG00000041340	ENSOMYG00000060239	ENSOMYG00000041345	ENSOMYG00000068190	ENSOMYG00000041391
Northern pike	MODERN SPECIES	1	PLEKHF1 (ENSELUG00000019817)	zgc:162297 (ENSELUG00000019863)	ENSELUG00000019841	ccne1 (ENSELUG00000019883)	ZNF536 (ENSELUG00000001298)	tshz3b (ENSELUG00000000876)	ENSELUG00000019926	ZNF507 (ENSELUG00000019939)	DPY19L3 (ENSELUG00000020011)	ENSELUG00000020056	ENSELUG00000020120	ENSELUG00000020137	DOK4 (ENSELUG00000020178)	ccdc102a (ENSELUG00000020229)	adgrg1 (ENSELUG00000020340)	ENSELUG00000020358 ##22	ENSELUG00000033053	slc7a6 (ENSELUG00000020394)	slc7a6os (ENSELUG00000020417)	ENSELUG00000020428	ENSELUG00000020444	MMP15 (ENSELUG00000000929)	dhcr7 (ENSELUG00000021170)	nadsyn1 (ENSELUG00000021225)	tpcn2 (ENSELUG00000021249)	ccnd1 (ENSELUG00000021257)	lto1 (ENSELUG00000021306)	ENSELUG00000026883	fgf19 (ENSELUG00000021326)	fgf4 (ENSELUG00000021335)	fgf3 (ENSELUG00000021345)
Osteoglossiformes	ANCESTRAL SPECIES	10	ENSGT00440000038232	ENSGT00940000165723.a	ENSGT00940000154704.d.b.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a.h	ENSGT00950000183126.b.b ##22	ENSGT00940000162142.d	ENSGT00950000182946.mb	ENSGT00950000182946.lb.a	ENSGT00940000156169.a.a	ENSGT00940000157373	ENSGT00940000154484.B.b	ENSGT00940000155989	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896.l	ENSGT00940000157750	ENSGT00940000155648.B.a	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.b.b
Asian bonytongue	MODERN SPECIES	16	pcdh15b (ENSSFOG00015011647)	dkk1b (ENSSFOG00015011716)	PRKG1 (ENSSFOG00015011739)	A1CF (ENSSFOG00015011774)	asah2 (ENSSFOG00015011845)	sgms1a (ENSSFOG00015011886)	minpp1b (ENSSFOG00015011905)	papss2b (ENSSFOG00015011918)	atad1b (ENSSFOG00015011948)	ptenb (ENSSFOG00015011995)	rnls (ENSSFOG00015012035)	lipf (ENSSFOG00015012065)	ankrd22 (ENSSFOG00015012083)	STAMBPL1 (ENSSFOG00015012100)	ACTA2 (ENSSFOG00015012125)	ENSSFOG00015026657 ##22	ch25h (ENSSFOG00015012150)	ifit9 (ENSSFOG00015012183)	ENSSFOG00015012185	ENSSFOG00015012199	ENSSFOG00015012206	slc16a12b (ENSSFOG00015012211)	pank1b (ENSSFOG00015012237)	ENSSFOG00015030147	ENSSFOG00015012271	rpp30 (ENSSFOG00015012510)	pcgf5b (ENSSFOG00015025469)	ENSSFOG00015024361	HECTD2 (ENSSFOG00015012617)	ppp1r3cb (ENSSFOG00015012696)	TNKS2 (ENSSFOG00015012708)
P. kingsleyae	MODERN SPECIES	26	rpp30 (ENSPKIG00000025220)	ANKRD1 (ENSPKIG00000025214)	PRKG1 (ENSPKIG00000025197)	A1CF (ENSPKIG00000025176)	asah2 (ENSPKIG00000025163)	sgms1a (ENSPKIG00000025149)	minpp1b (ENSPKIG00000025134)	papss2b (ENSPKIG00000025087)	atad1b (ENSPKIG00000025074)	ptenb (ENSPKIG00000025050)	rnls (ENSPKIG00000025034)	lipf (ENSPKIG00000025024)	ankrd22 (ENSPKIG00000025019)	STAMBPL1 (ENSPKIG00000025004)	ACTA2 (ENSPKIG00000024994)	ENSPKIG00000024985 ##22	ch25h (ENSPKIG00000024977)	ifit9 (ENSPKIG00000024973)	ENSPKIG00000024971	ENSPKIG00000024967	ENSPKIG00000024963	slc16a12b (ENSPKIG00000024944)	pank1b (ENSPKIG00000024928)	ENSPKIG00000024918	ENSPKIG00000024881	rpp30 (ENSPKIG00000024858)
Spotted gar	MODERN SPECIES	671	dkk1b (ENSLOCG00000006347)	PRKG1 (ENSLOCG00000006321)	A1CF (ENSLOCG00000006302)	asah2 (ENSLOCG00000006273)	sgms1a (ENSLOCG00000006259)	ENSLOCG00000018233	minpp1b (ENSLOCG00000006241)	papss2b (ENSLOCG00000006215)	atad1b (ENSLOCG00000006195)	ENSLOCG00000006145	rnls (ENSLOCG00000006122)	lipf (ENSLOCG00000006105)	ankrd22 (ENSLOCG00000006086)	STAMBPL1 (ENSLOCG00000006073)	ACTA2 (ENSLOCG00000006057)	ENSLOCG00000006042 ##22	ch25h (ENSLOCG00000018232)	ifit9 (ENSLOCG00000006028)	ppp1r3ca (ENSLOCG00000006006)	TNKS2 (ENSLOCG00000005988)	ENSLOCG00000018231	ENSLOCG00000018230	TBC1D12 (ENSLOCG00000005974)	noc3l (ENSLOCG00000005949)	plce1 (ENSLOCG00000005918)	SLC35G1 (ENSLOCG00000005895)	lgi1b (ENSLOCG00000005878)	fra10ac1 (ENSLOCG00000005865)	pde6c (ENSLOCG00000005849)	rbp4 (ENSLOCG00000005811)	cep55l (ENSLOCG00000005791)
Reedfish	MODERN SPECIES	10	ENSECRG00000002602	dkk1b (ENSECRG00000002623)	PRKG1 (ENSECRG00000002647)	A1CF (ENSECRG00000002696)	asah2 (ENSECRG00000002738)	sgms1a (ENSECRG00000002780)	minpp1b (ENSECRG00000002789)	papss2b (ENSECRG00000002808)	atad1b (ENSECRG00000002848)	ENSECRG00000002864	rnls (ENSECRG00000002872)	lipf (ENSECRG00000002882)	lipf (ENSECRG00000002896)	STAMBPL1 (ENSECRG00000002910)	ENSECRG00000002934	ENSECRG00000002956 ##22	ENSECRG00000002975	ifit9 (ENSECRG00000002992)	ENSECRG00000003011	ENSECRG00000003018	ENSECRG00000003027	ENSECRG00000003048	ENSECRG00000003081	ENSECRG00000003094	slc16a12b (ENSECRG00000003122)	pank1b (ENSECRG00000003148)	zgc:65997 (ENSECRG00000003174)	ENSECRG00000003250	ENSECRG00000003265	rpp30 (ENSECRG00000003314)	ankrd1b (ENSECRG00000003342)
Sarcopterygii	ANCESTRAL SPECIES	75	ENSGT00940000165723	ENSGT00940000154704.d	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449
Coelacanth	MODERN SPECIES	2619												LIPA (ENSLACG00000000424)	ANKRD22 (ENSLACG00000001983)	STAMBPL1 (ENSLACG00000003813)	ENSLACG00000004951	ENSLACG00000005702 ##22
Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00940000165723	ENSGT00940000154704.d	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.b
Anura	ANCESTRAL SPECIES	66	ENSGT00940000165723	ENSGT00940000154704.d	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000011435	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.rb	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946.a
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000011051	ENSLLEG00000011068 #13	SGMS1 (ENSLLEG00000011097)	ENSLLEG00000011127	C8orf76 (ENSLLEG00000011150)	MINPP1 (ENSLLEG00000011199)	PAPSS2 (ENSLLEG00000011283)	ATAD1 (ENSLLEG00000011824)	ENSLLEG00000011888	PTEN (ENSLLEG00000011940)	ENSLLEG00000012136	RNLS (ENSLLEG00000012148)	ENSLLEG00000012198	STAMBPL1 (ENSLLEG00000012293)	ACTA2 (ENSLLEG00000012441)	ENSLLEG00000012533 ##22	ENSLLEG00000012705	CH25H (ENSLLEG00000012766)	ENSLLEG00000012783	ENSLLEG00000012821	ENSLLEG00000012917	ENSLLEG00000012977	ENSLLEG00000013014	ENSLLEG00000013047	ENSLLEG00000013076	ENSLLEG00000013236	ENSLLEG00000013277	ENSLLEG00000013374	ENSLLEG00000013564	SLC16A12 (ENSLLEG00000013586)	ENSLLEG00000013670
Frog	MODERN SPECIES	7	a1cf (ENSXETG00000006611)	asah2 (ENSXETG00000006612)	sgms1 (ENSXETG00000006614)	ENSXETG00000042393	c8orf76 (ENSXETG00000006616)	minpp1 (ENSXETG00000043883)	minpp1 (ENSXETG00000006618)	papss2 (ENSXETG00000009264)	atad1 (ENSXETG00000009266)	pten (ENSXETG00000009268)	rnls (ENSXETG00000009272)	lipa (ENSXETG00000009273)	ankrd22 (ENSXETG00000030632)	stambpl1 (ENSXETG00000009278)	acta2 (ENSXETG00000009279)	fas (ENSXETG00000031916) ##22	ch25h (ENSXETG00000031120)	ENSXETG00000044135	ENSXETG00000038923	ENSXETG00000046209 ##13	ENSXETG00000044073	ENSXETG00000045319	ENSXETG00000047411	ENSXETG00000045750	ENSXETG00000038640	ENSXETG00000044806	ENSXETG00000043206	XB5876791 [provisional:olfr1019] (ENSXETG00000009263)	ENSXETG00000041113	ENSXETG00000041908	ENSXETG00000042092
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000161319	ENSGT00940000154704.d	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Mammalia	ANCESTRAL SPECIES	34	ENSGT00940000161319	ENSGT00940000154704.d	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157500
Theria	ANCESTRAL SPECIES	21	ENSGT00390000004632	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Eutheria	ANCESTRAL SPECIES	13	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Xenarthra	ANCESTRAL SPECIES	151						ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989
Sloth	MODERN SPECIES	1634																ENSCHOG00000009710 ##22
Armadillo	MODERN SPECIES	2150					PAPSS2 (ENSDNOG00000000395)	ATAD1 (ENSDNOG00000000925)	ENSDNOG00000000929	ENSDNOG00000039080	ENSDNOG00000017641	LIPK (ENSDNOG00000012768)	LIPN (ENSDNOG00000002297)	LIPM (ENSDNOG00000024258)	ANKRD22 (ENSDNOG00000037822)	STAMBPL1 (ENSDNOG00000043894)	ACTA2 (ENSDNOG00000006719)	FAS (ENSDNOG00000032876) ##22	ENSDNOG00000039159	ENSDNOG00000038076
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Elephant	MODERN SPECIES	3	ENSLAFG00000015469	SGMS1 (ENSLAFG00000032570)	ENSLAFG00000011711	PAPSS2 (ENSLAFG00000001364)	ATAD1 (ENSLAFG00000001365)	PTEN (ENSLAFG00000005292)	RNLS (ENSLAFG00000004500)	LIPJ (ENSLAFG00000011174)	LIPF (ENSLAFG00000018433)	LIPK (ENSLAFG00000018435)	LIPN (ENSLAFG00000000948)	LIPM (ENSLAFG00000017061)	ANKRD22 (ENSLAFG00000030797)	STAMBPL1 (ENSLAFG00000017066)	ACTA2 (ENSLAFG00000000910)	ENSLAFG00000000911 ##22	ENSLAFG00000029850	CH25H (ENSLAFG00000001587)	LIPA (ENSLAFG00000001585)	IFIT3 (ENSLAFG00000008209)	ENSLAFG00000008208	ENSLAFG00000028666	IFIT5 (ENSLAFG00000011455)	SLC16A12 (ENSLAFG00000022778)	PANK1 (ENSLAFG00000015729)	KIF20B (ENSLAFG00000004622)	HTR7 (ENSLAFG00000015928)	RPP30 (ENSLAFG00000015931)	ANKRD1 (ENSLAFG00000015939)	PCGF5 (ENSLAFG00000011154)	HECTD2 (ENSLAFG00000003172)
Hyrax	MODERN SPECIES	1468																ENSPCAG00000008082 ##22
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183126.b.b ##22
Hedgehog	MODERN SPECIES	1890																ENSEEUG00000014309 ##22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Dolphin	MODERN SPECIES	4529																FAS (ENSTTRG00000008019) ##22
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Vaquita	MODERN SPECIES	7	A1CF (ENSPSNG00000019768)	ENSPSNG00000019925	SGMS1 (ENSPSNG00000020042)	ENSPSNG00000020083	MINPP1 (ENSPSNG00000020186)	PAPSS2 (ENSPSNG00000020125)	ATAD1 (ENSPSNG00000020236)	PTEN (ENSPSNG00000020260)	RNLS (ENSPSNG00000020289)	LIPK (ENSPSNG00000020318)	LIPN (ENSPSNG00000020364)	LIPM (ENSPSNG00000020410)	ANKRD22 (ENSPSNG00000020462)	STAMBPL1 (ENSPSNG00000020503)	ACTA2 (ENSPSNG00000020576)	FAS (ENSPSNG00000020648) ##22	CH25H (ENSPSNG00000020727)	LIPA (ENSPSNG00000020759)	IFIT1 (ENSPSNG00000020823)	IFIT5 (ENSPSNG00000009619)	SLC16A12 (ENSPSNG00000009808)	PANK1 (ENSPSNG00000009918)	KIF20B (ENSPSNG00000010121)	HTR7 (ENSPSNG00000010211)	RPP30 (ENSPSNG00000010340)	ANKRD1 (ENSPSNG00000010391)	PCGF5 (ENSPSNG00000010438)	HECTD2 (ENSPSNG00000010485)	PPP1R3C (ENSPSNG00000010577)	TNKS2 (ENSPSNG00000010639)	FGFBP3 (ENSPSNG00000010751)
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157500
Narwhal	MODERN SPECIES	311	A1CF (ENSMMNG00015013332)	ENSMMNG00015013453	SGMS1 (ENSMMNG00015013583)	MINPP1 (ENSMMNG00015013624)	PAPSS2 (ENSMMNG00015013664)	ATAD1 (ENSMMNG00015013697)	PTEN (ENSMMNG00015013721)	RNLS (ENSMMNG00015013738)	LIPF (ENSMMNG00015013755)	LIPK (ENSMMNG00015013791)	LIPN (ENSMMNG00015013810)	LIPM (ENSMMNG00015013823)	ANKRD22 (ENSMMNG00015013839)	STAMBPL1 (ENSMMNG00015013850)	ACTA2 (ENSMMNG00015013862)	FAS (ENSMMNG00015013934) ##22	CH25H (ENSMMNG00015013959)	LIPA (ENSMMNG00015013970)	IFIT5 (ENSMMNG00015013989)	SLC16A12 (ENSMMNG00015014005)	PANK1 (ENSMMNG00015014031)	KIF20B (ENSMMNG00015014086)	HTR7 (ENSMMNG00015014134)	RPP30 (ENSMMNG00015014149)	ANKRD1 (ENSMMNG00015014157)	PCGF5 (ENSMMNG00015014168)	ENSMMNG00015014186	PPP1R3C (ENSMMNG00015014217)	TNKS2 (ENSMMNG00015014252)	FGFBP3 (ENSMMNG00015014375)	BTAF1 (ENSMMNG00015014407)
Beluga whale	MODERN SPECIES	65	A1CF (ENSDLEG00000008974)	ASAH2 (ENSDLEG00000008423)	SGMS1 (ENSDLEG00000008315)	MINPP1 (ENSDLEG00000008121)	ATAD1 (ENSDLEG00000008067)	ENSDLEG00000008057	ENSDLEG00000008046	ENSDLEG00000008034	LIPF (ENSDLEG00000007994)	LIPK (ENSDLEG00000007972)	LIPN (ENSDLEG00000007954)	LIPM (ENSDLEG00000007943)	ANKRD22 (ENSDLEG00000021832)	STAMBPL1 (ENSDLEG00000021830)	ACTA2 (ENSDLEG00000021829)	FAS (ENSDLEG00000021827) ##22	CH25H (ENSDLEG00000021823)	LIPA (ENSDLEG00000021819)	IFIT5 (ENSDLEG00000021815)	SLC16A12 (ENSDLEG00000021813)	PANK1 (ENSDLEG00000021806)	KIF20B (ENSDLEG00000021804)	HTR7 (ENSDLEG00000021800)	RPP30 (ENSDLEG00000021799)	ANKRD1 (ENSDLEG00000021795)	PCGF5 (ENSDLEG00000021786)	ENSDLEG00000021769	PPP1R3C (ENSDLEG00000021766)	TNKS2 (ENSDLEG00000021762)	FGFBP3 (ENSDLEG00000021759)	BTAF1 (ENSDLEG00000021723)
Sperm whale	MODERN SPECIES	12	A1CF (ENSPCTG00005018564)	ENSPCTG00005018899	SGMS1 (ENSPCTG00005019629)	MINPP1 (ENSPCTG00005019668)	PAPSS2 (ENSPCTG00005019760)	ATAD1 (ENSPCTG00005019823)	PTEN (ENSPCTG00005019852)	RNLS (ENSPCTG00005019880)	ENSPCTG00005019926	LIPF (ENSPCTG00005019974)	LIPN (ENSPCTG00005020102)	LIPM (ENSPCTG00005020133)	ANKRD22 (ENSPCTG00005020200)	STAMBPL1 (ENSPCTG00005020236)	ACTA2 (ENSPCTG00005020294)	FAS (ENSPCTG00005020359) ##22	CH25H (ENSPCTG00005020465)	LIPA (ENSPCTG00005020484)	IFIT1 (ENSPCTG00005020556)	IFIT5 (ENSPCTG00005020572)	SLC16A12 (ENSPCTG00005020592)	PANK1 (ENSPCTG00005020702)	KIF20B (ENSPCTG00005020786)	HTR7 (ENSPCTG00005020889)	RPP30 (ENSPCTG00005020952)	ANKRD1 (ENSPCTG00005021000)	PCGF5 (ENSPCTG00005021034)	HECTD2 (ENSPCTG00005021069)	PPP1R3C (ENSPCTG00005021115)	TNKS2 (ENSPCTG00005021153)	FGFBP3 (ENSPCTG00005021257)
Blue whale	MODERN SPECIES	7	SGMS1 (ENSBMSG00010022213)	MINPP1 (ENSBMSG00010022209)	PAPSS2 (ENSBMSG00010022207)	ATAD1 (ENSBMSG00010022204)	ENSBMSG00010022202	PTEN (ENSBMSG00010022200)	RNLS (ENSBMSG00010022196)	LIPJ (ENSBMSG00010022192)	LIPF (ENSBMSG00010022190)	LIPK (ENSBMSG00010022187)	LIPN (ENSBMSG00010022184)	LIPM (ENSBMSG00010022182)	ANKRD22 (ENSBMSG00010022180)	STAMBPL1 (ENSBMSG00010022177)	ACTA2 (ENSBMSG00010022175)	FAS (ENSBMSG00010022172) ##22	CH25H (ENSBMSG00010022165)	LIPA (ENSBMSG00010022162)	IFIT1 (ENSBMSG00010022157)	IFIT5 (ENSBMSG00010022155)	SLC16A12 (ENSBMSG00010022151)	PANK1 (ENSBMSG00010022142)	KIF20B (ENSBMSG00010022136)	HTR7 (ENSBMSG00010022131)	ENSBMSG00010022128	ANKRD1 (ENSBMSG00010022126)	PCGF5 (ENSBMSG00010022123)	HECTD2 (ENSBMSG00010022121)	PPP1R3C (ENSBMSG00010022118)	TNKS2 (ENSBMSG00010022115)	FGFBP3 (ENSBMSG00010022112)
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Yarkand deer	MODERN SPECIES	6	SGMS1 (ENSCHYG00000026602)	MINPP1 (ENSCHYG00000026614)	PAPSS2 (ENSCHYG00000026630)	ATAD1 (ENSCHYG00000026673)	ENSCHYG00000026694	RNLS (ENSCHYG00000026700)	LIPJ (ENSCHYG00000026713)	ENSCHYG00000026720	ENSCHYG00000026727	LIPK (ENSCHYG00000026737)	LIPN (ENSCHYG00000026743)	LIPM (ENSCHYG00000026759)	ANKRD22 (ENSCHYG00000026783)	STAMBPL1 (ENSCHYG00000026791)	ACTA2 (ENSCHYG00000026817)	FAS (ENSCHYG00000026830) ##22	ENSCHYG00000026839	ENSCHYG00000026853	ENSCHYG00000026859	IFIT2 (ENSCHYG00000026864)	IFIT3 (ENSCHYG00000026876)	SLC16A12 (ENSCHYG00000026893)	PANK1 (ENSCHYG00000026916)	KIF20B (ENSCHYG00000004787)	ENSCHYG00000004922	ENSCHYG00000004940	HTR7 (ENSCHYG00000004976)	RPP30 (ENSCHYG00000005016)	ANKRD1 (ENSCHYG00000005059)	PCGF5 (ENSCHYG00000005101)	HECTD2 (ENSCHYG00000005209)
Percora_a	ANCESTRAL SPECIES	14	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Bovidae	ANCESTRAL SPECIES	24	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Caprinae	ANCESTRAL SPECIES	19	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066.c	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Rambouillet Sheep	MODERN SPECIES	14	MINPP1 (ENSOARG00020006903)	SGMS1 (ENSOARG00020006993)	PAPSS2 (ENSOARG00020007102)	ATAD1 (ENSOARG00020007317)	PTEN (ENSOARG00020007451)	RNLS (ENSOARG00020007497)	LIPJ (ENSOARG00020007569)	ENSOARG00020007648	ENSOARG00020007707	LIPK (ENSOARG00020007908)	LIPN (ENSOARG00020007970)	LIPM (ENSOARG00020008055)	ANKRD22 (ENSOARG00020008170)	STAMBPL1 (ENSOARG00020008275)	ACTA2 (ENSOARG00020008488)	FAS (ENSOARG00020008595) ##22	CH25H (ENSOARG00020008637)	LIPA (ENSOARG00020008655)	IFIT2 (ENSOARG00020008771)	IFIT3 (ENSOARG00020008812)	IFIT5 (ENSOARG00020008889)	SLC16A12 (ENSOARG00020008925)	PANK1 (ENSOARG00020009031)	KIF20B (ENSOARG00020009389)	HTR7 (ENSOARG00020009867)	RPP30 (ENSOARG00020009954)	ANKRD1 (ENSOARG00020010048)	PCGF5 (ENSOARG00020010217)	ENSOARG00020010346	HECTD2 (ENSOARG00020010414)	PPP1R3C (ENSOARG00020011237)
Goat	MODERN SPECIES	18	PAPSS2 (ENSCHIG00000013444)	ENSCHIG00000020310	ENSCHIG00000006638	ENSCHIG00000020422	ENSCHIG00000017631	LIPJ (ENSCHIG00000012756)	ENSCHIG00000020531	ENSCHIG00000016000	ENSCHIG00000001835	LIPK (ENSCHIG00000019246)	LIPN (ENSCHIG00000007760)	LIPM (ENSCHIG00000020369)	ANKRD22 (ENSCHIG00000007037)	STAMBPL1 (ENSCHIG00000011285)	ACTA2 (ENSCHIG00000017779)	FAS (ENSCHIG00000013251) ##22	CH25H (ENSCHIG00000004030)	LIPA (ENSCHIG00000020254)	IFIT2 (ENSCHIG00000017063)	IFIT3 (ENSCHIG00000014238)	IFIT1 (ENSCHIG00000021671)	IFIT5 (ENSCHIG00000005737)	SLC16A12 (ENSCHIG00000007599)	PANK1 (ENSCHIG00000017163)	KIF20B (ENSCHIG00000012350)	ENSCHIG00000024269	HTR7 (ENSCHIG00000018265)	RPP30 (ENSCHIG00000012901)	ENSCHIG00000009829	ANKRD1 (ENSCHIG00000018645)	ENSCHIG00000011467
Bovinae	ANCESTRAL SPECIES	22	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Bos	ANCESTRAL SPECIES	23	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000157373	ENSGT00940000155989.n	ENSGT00940000178439	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896
Bos_b	ANCESTRAL SPECIES	23	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00940000154696	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000157373	ENSGT00940000155989.n	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Hybrid Bos Indicus	MODERN SPECIES	18	ATAD1 (ENSBIXG00005023232)	ENSBIXG00005023308	RNLS (ENSBIXG00005023409)	LIPJ (ENSBIXG00005023465)	ENSBIXG00005023480	ENSBIXG00005023499	LIPF (ENSBIXG00005004025)	LIPK (ENSBIXG00005006003)	LIPN (ENSBIXG00005023578)	LIPM (ENSBIXG00005023619)	ENSBIXG00005004044	ANKRD22 (ENSBIXG00005004048)	ENSBIXG00005023662	ACTA2 (ENSBIXG00005023710)	STAMBPL1 (ENSBIXG00005023795)	FAS (ENSBIXG00005023818) ##22	CH25H (ENSBIXG00005023855)	IFIT2 (ENSBIXG00005004090)	IFIT3 (ENSBIXG00005023916)	IFIT1 (ENSBIXG00005004098)	LIPA (ENSBIXG00005023981)	IFIT5 (ENSBIXG00005006284)	SLC16A12 (ENSBIXG00005024072)	ENSBIXG00005024097	PANK1 (ENSBIXG00005024213)	KIF20B (ENSBIXG00005024297)	HTR7 (ENSBIXG00005006174)	RPP30 (ENSBIXG00005006914)	ANKRD1 (ENSBIXG00005024463)	ENSBIXG00005024487	PCGF5 (ENSBIXG00005024540)
Cow	MODERN SPECIES	18	ENSBTAG00000051961	PAPSS2 (ENSBTAG00000003196)	ATAD1 (ENSBTAG00000000806)	PTEN (ENSBTAG00000009498)	RNLS (ENSBTAG00000054881)	LIPJ (ENSBTAG00000038063)	LIPF (ENSBTAG00000006445)	LIPK (ENSBTAG00000039234)	LIPN (ENSBTAG00000024911)	LIPM (ENSBTAG00000013364)	ANKRD22 (ENSBTAG00000013368)	ENSBTAG00000048462	STAMBPL1 (ENSBTAG00000001298)	ENSBTAG00000049887	ACTA2 (ENSBTAG00000014614)	FAS (ENSBTAG00000010785) ##22	ENSBTAG00000052813	LIPA (ENSBTAG00000003636)	IFIT2 (ENSBTAG00000034918)	IFIT3 (ENSBTAG00000009768)	IFIT1 (ENSBTAG00000007881)	IFIT5 (ENSBTAG00000017367)	SLC16A12 (ENSBTAG00000004662)	PANK1 (ENSBTAG00000010442)	KIF20B (ENSBTAG00000005708)	ENSBTAG00000048815	ENSBTAG00000034597	HTR7 (ENSBTAG00000008783)	RPP30 (ENSBTAG00000002973)	ANKRD1 (ENSBTAG00000011734)	PCGF5 (ENSBTAG00000004964)
Bos_a	ANCESTRAL SPECIES	17	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000157373	ENSGT00940000155989.n	ENSGT00940000178439	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896
Wild yak	MODERN SPECIES	930									LIPF (ENSBMUG00000016461)	LIPK (ENSBMUG00000016482)	LIPN (ENSBMUG00000016493)	LIPM (ENSBMUG00000016515)	ANKRD22 (ENSBMUG00000016528)	STAMBPL1 (ENSBMUG00000016626)	ACTA2 (ENSBMUG00000016646)	FAS (ENSBMUG00000016661) ##22
Domestic yak	MODERN SPECIES	17	SGMS1 (ENSBGRG00000019263)	ENSBGRG00000019392	MINPP1 (ENSBGRG00000019420)	PAPSS2 (ENSBGRG00000019556)	ATAD1 (ENSBGRG00000019725)	ENSBGRG00000019927	RNLS (ENSBGRG00000020012)	LIPJ (ENSBGRG00000015956)	LIPF (ENSBGRG00000016129)	LIPK (ENSBGRG00000016522)	LIPN (ENSBGRG00000016587)	LIPM (ENSBGRG00000016688)	ANKRD22 (ENSBGRG00000016894)	STAMBPL1 (ENSBGRG00000016961)	ACTA2 (ENSBGRG00000017216)	FAS (ENSBGRG00000017283) ##22	CH25H (ENSBGRG00000017491)	ENSBGRG00000017517	LIPA (ENSBGRG00000017545)	IFIT2 (ENSBGRG00000017758)	IFIT3 (ENSBGRG00000017794)	IFIT1 (ENSBGRG00000017867)	IFIT5 (ENSBGRG00000017931)	SLC16A12 (ENSBGRG00000017960)	ENSBGRG00000018089	PANK1 (ENSBGRG00000018127)	ENSBGRG00000018400	ENSBGRG00000018495	HTR7 (ENSBGRG00000018513)	RPP30 (ENSBGRG00000018614)	ANKRD1 (ENSBGRG00000018779)
American bison	MODERN SPECIES	3025				ATAD1 (ENSBBBG00000012651)	PTEN (ENSBBBG00000012626)	RNLS (ENSBBBG00000002424)	LIPJ (ENSBBBG00000012591)	ENSBBBG00000012582	LIPF (ENSBBBG00000007025)	LIPK (ENSBBBG00000012544)	LIPN (ENSBBBG00000012537)	LIPM (ENSBBBG00000012531)	ANKRD22 (ENSBBBG00000012513)	STAMBPL1 (ENSBBBG00000012498)	ACTA2 (ENSBBBG00000012469)	FAS (ENSBBBG00000012461) ##22	CH25H (ENSBBBG00000002384)	LIPA (ENSBBBG00000012444)	IFIT2 (ENSBBBG00000002372)	IFIT3 (ENSBBBG00000012416)	IFIT1 (ENSBBBG00000012404)	ENSBBBG00000002361	IFIT5 (ENSBBBG00000012396)	SLC16A12 (ENSBBBG00000012392)	PANK1 (ENSBBBG00000002351)	KIF20B (ENSBBBG00000012360)
Siberian musk deer	MODERN SPECIES	1163						ENSMMSG00000012789	LIPJ (ENSMMSG00000012752)	ENSMMSG00000012730	LIPF (ENSMMSG00000012603)	LIPK (ENSMMSG00000012572)	LIPN (ENSMMSG00000012544)	LIPM (ENSMMSG00000012491)	ANKRD22 (ENSMMSG00000012470)	STAMBPL1 (ENSMMSG00000012381)	ACTA2 (ENSMMSG00000012340)	FAS (ENSMMSG00000012306) ##22	CH25H (ENSMMSG00000012297)	LIPA (ENSMMSG00000012251)	IFIT2 (ENSMMSG00000012235)	IFIT3 (ENSMMSG00000012211)	IFIT1 (ENSMMSG00000012187)	IFIT5 (ENSMMSG00000012168)	SLC16A12 (ENSMMSG00000012145)	PANK1 (ENSMMSG00000012033)	KIF20B (ENSMMSG00000011982)	ENSMMSG00000011963	ENSMMSG00000011945	ENSMMSG00000011925	ENSMMSG00000011885	HTR7 (ENSMMSG00000011852)	RPP30 (ENSMMSG00000011808)
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Arabian camel	MODERN SPECIES	2	A1CF (ENSCDRG00005008743)	ENSCDRG00005008481	SGMS1 (ENSCDRG00005008417)	PAPSS2 (ENSCDRG00005007937)	ATAD1 (ENSCDRG00005007858)	PTEN (ENSCDRG00005007749)	RNLS (ENSCDRG00005007701)	LIPJ (ENSCDRG00005007645)	LIPF (ENSCDRG00005007510)	LIPK (ENSCDRG00005007417)	LIPN (ENSCDRG00005007375)	LIPM (ENSCDRG00005007263)	ANKRD22 (ENSCDRG00005007227)	ACTA2 (ENSCDRG00005007102)	STAMBPL1 (ENSCDRG00005006996)	FAS (ENSCDRG00005006938) ##22	CH25H (ENSCDRG00005006925)	LIPA (ENSCDRG00005006808)	IFIT2 (ENSCDRG00005006766)	IFIT3 (ENSCDRG00005006755)	IFIT1 (ENSCDRG00005006735)	IFIT5 (ENSCDRG00005006693)	SLC16A12 (ENSCDRG00005006630)	ENSCDRG00005019495	ENSCDRG00005019479	KIF20B (ENSCDRG00005019451)	HTR7 (ENSCDRG00005019416)	RPP30 (ENSCDRG00005019395)	ANKRD1 (ENSCDRG00005019372)	ENSCDRG00005019353	PCGF5 (ENSCDRG00005019307)
Alpaca	MODERN SPECIES	2756									LIPK (ENSVPAG00000005621)	LIPN (ENSVPAG00000005622)	LIPM (ENSVPAG00000005623)	ANKRD22 (ENSVPAG00000005624)	STAMBPL1 (ENSVPAG00000005625)	ENSVPAG00000005628	ACTA2 (ENSVPAG00000005629)	ENSVPAG00000005630 ##22
Suina	ANCESTRAL SPECIES	6	ENSGT00940000161661	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Pig	MODERN SPECIES	5	ENSSSCG00000041250	A1CF (ENSSSCG00000010431)	ENSSSCG00000010432	SGMS1 (ENSSSCG00000010433)	MINPP1 (ENSSSCG00000010435)	PAPSS2 (ENSSSCG00000010437)	ATAD1 (ENSSSCG00000062685)	ENSSSCG00000059571	ENSSSCG00000010440	RNLS (ENSSSCG00000023141)	LIPN (ENSSSCG00000031373)	LIPM (ENSSSCG00000010444)	ANKRD22 (ENSSSCG00000010445)	STAMBPL1 (ENSSSCG00000010446)	ACTA2 (ENSSSCG00000010447)	FAS (ENSSSCG00000010448) ##22	ENSSSCG00000041185	CH25H (ENSSSCG00000010449)	LIPA (ENSSSCG00000010450)	IFIT2 (ENSSSCG00000010451)	IFIT3 (ENSSSCG00000061268)	ENSSSCG00000050592	IFIT1 (ENSSSCG00000010452)	IFIT5 (ENSSSCG00000010454)	SLC16A12 (ENSSSCG00000010455)	PANK1 (ENSSSCG00000010456)	KIF20B (ENSSSCG00000010457)	ENSSSCG00000045077	HTR7 (ENSSSCG00000010459)	RPP30 (ENSSSCG00000010460)	ANKRD1 (ENSSSCG00000010461)
Chacoan peccary	MODERN SPECIES	199	PRKG1 (ENSCWAG00000011228)	A1CF (ENSCWAG00000011006)	ENSCWAG00000010046	SGMS1 (ENSCWAG00000009915)	MINPP1 (ENSCWAG00000009841)	PAPSS2 (ENSCWAG00000009769)	ATAD1 (ENSCWAG00000009714)	PTEN (ENSCWAG00000009679)	RNLS (ENSCWAG00000009621)	LIPK (ENSCWAG00000009544)	LIPN (ENSCWAG00000009461)	LIPM (ENSCWAG00000009317)	ANKRD22 (ENSCWAG00000009235)	ACTA2 (ENSCWAG00000009181)	STAMBPL1 (ENSCWAG00000008940)	FAS (ENSCWAG00000008900) ##22	CH25H (ENSCWAG00000008878)	LIPA (ENSCWAG00000008833)	IFIT2 (ENSCWAG00000008808)	IFIT3 (ENSCWAG00000008761)	IFIT1 (ENSCWAG00000008707)	IFIT5 (ENSCWAG00000008673)	SLC16A12 (ENSCWAG00000008589)	PANK1 (ENSCWAG00000008284)	ENSCWAG00000008224	KIF20B (ENSCWAG00000008159)	HTR7 (ENSCWAG00000008075)	RPP30 (ENSCWAG00000008008)	ANKRD1 (ENSCWAG00000005259)	PCGF5 (ENSCWAG00000005162)	ENSCWAG00000005131
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d	ENSGT00950000182946.c.b.b	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Carnivora	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000153505.a.b.a.a	ENSGT00940000162764.A.b	ENSGT00940000153582.b.a.a.a.b	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324
Caniformia	ANCESTRAL SPECIES	13	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000153505.a.b.a.a	ENSGT00940000162764.A.b	ENSGT00940000153582.b.a.a.a.b	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000153505.a.b.a.a	ENSGT00940000162764.A.b	ENSGT00940000153582.b.a.a.a.b	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324
Ursidae	ANCESTRAL SPECIES	5	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000153505.a.b.a.a	ENSGT00940000162764.A.b	ENSGT00940000153582.b.a.a.a.b	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324
Ursus	ANCESTRAL SPECIES	128	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000153505.a.b.a.a	ENSGT00940000162764.A.b	ENSGT00940000153582.b.a.a.a.b	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324
Polar bear	MODERN SPECIES	160	ENSUMAG00000011188	SGMS1 (ENSUMAG00000011285)	ENSUMAG00000011294	PAPSS2 (ENSUMAG00000011450)	ATAD1 (ENSUMAG00000012300)	ENSUMAG00000012311	RNLS (ENSUMAG00000012352)	LIPJ (ENSUMAG00000012354)	LIPF (ENSUMAG00000012359)	LIPK (ENSUMAG00000012365)	LIPN (ENSUMAG00000012370)	LIPM (ENSUMAG00000012378)	ANKRD22 (ENSUMAG00000012384)	STAMBPL1 (ENSUMAG00000012390)	ACTA2 (ENSUMAG00000012394)	FAS (ENSUMAG00000012403) ##22	CH25H (ENSUMAG00000012422)	LIPA (ENSUMAG00000012425)	ENSUMAG00000012427	IFIT2 (ENSUMAG00000012430)	IFIT3 (ENSUMAG00000012433)	ENSUMAG00000012436	ZNF248 (ENSUMAG00000012447)	ENSUMAG00000012450	ENSUMAG00000012452	ZNF25 (ENSUMAG00000012462)	ENSUMAG00000012474	ZNF37A (ENSUMAG00000012483)	CHRM3 (ENSUMAG00000012503)	ENSUMAG00000012510	ZP4 (ENSUMAG00000012518)
American black bear	MODERN SPECIES	7330															ACTA2 (ENSUAMG00000014351)	ENSUAMG00000014359 ##22
Giant Panda	MODERN SPECIES	16	ENSAMEG00000000551	ENSAMEG00000000577	ENSAMEG00000000595	ENSAMEG00000000606	ATAD1 (ENSAMEG00000000672)	PTEN (ENSAMEG00000000698)	RNLS (ENSAMEG00000000722)	LIPJ (ENSAMEG00000000731)	LIPF (ENSAMEG00000000736)	LIPK (ENSAMEG00000000784)	LIPN (ENSAMEG00000000798)	LIPM (ENSAMEG00000000799)	ANKRD22 (ENSAMEG00000000870)	STAMBPL1 (ENSAMEG00000000883)	ACTA2 (ENSAMEG00000000907)	FAS (ENSAMEG00000000932) ##22	CH25H (ENSAMEG00000020100)	LIPA (ENSAMEG00000000962)	ENSAMEG00000020102	ENSAMEG00000026300	IFIT3 (ENSAMEG00000027212)	ENSAMEG00000020103	ENSAMEG00000024147	ENSAMEG00000024005	ENSAMEG00000025185	ENSAMEG00000024839	ENSAMEG00000006579	ENSAMEG00000020104	ENSAMEG00000002943	RYR2 (ENSAMEG00000002582)	MTR (ENSAMEG00000001206)
Mustelinae	ANCESTRAL SPECIES	146										ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.f	ENSGT00950000182946.d.e	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324	ENSGT00940000154906.C.d	ENSGT00420000029824
American mink	MODERN SPECIES	411									NTPCR (ENSNVIG00000024322)	LIPK (ENSNVIG00000024327)	LIPN (ENSNVIG00000024330)	LIPM (ENSNVIG00000024334)	ANR22 (ENSNVIG00000024351)	STALP (ENSNVIG00000024360)	ACTA2 (ENSNVIG00000024367)	FAS (ENSNVIG00000024378) ##22	CH25H (ENSNVIG00000024383)	LIPA (ENSNVIG00000024385)	ENSNVIG00000024388	IFIT2 (ENSNVIG00000024389)	IFIT3 (ENSNVIG00000024391)	ENSNVIG00000024394	ENSNVIG00000024396	ENSNVIG00000024398	ZNF248 (ENSNVIG00000024399)	ZNF25 (ENSNVIG00000024400)	ENSNVIG00000024402	ZNF37A (ENSNVIG00000024403)
Ferret	MODERN SPECIES	532										LIPK (ENSMPUG00000006691)	ENSMPUG00000006668	LIPM (ENSMPUG00000006551)	ANKRD22 (ENSMPUG00000006541)	STAMBPL1 (ENSMPUG00000006524)	ACTA2 (ENSMPUG00000006517)	FAS (ENSMPUG00000006508) ##22	CH25H (ENSMPUG00000019960)	LIPA (ENSMPUG00000006491)	IFIT2 (ENSMPUG00000006489)	IFIT3 (ENSMPUG00000020198)	ENSMPUG00000006482	ENSMPUG00000020197	ZNF248 (ENSMPUG00000006471)
Canidae	ANCESTRAL SPECIES	70	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696
Canis_lupus	ANCESTRAL SPECIES	43	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696
Dog	MODERN SPECIES	18	ASAH2 (ENSCAFG00845028926)	SGMS1 (ENSCAFG00845029103)	ENSCAFG00845029171	ENSCAFG00845029238	ATAD1 (ENSCAFG00845029330)	PTEN (ENSCAFG00845029443)	RNLS (ENSCAFG00845029499)	ENSCAFG00845029555	LIPF (ENSCAFG00845029584)	LIPK (ENSCAFG00845029616)	LIPN (ENSCAFG00845029649)	LIPM (ENSCAFG00845029667)	ANKRD22 (ENSCAFG00845029709)	STAMBPL1 (ENSCAFG00845029757)	ACTA2 (ENSCAFG00845029801)	ENSCAFG00845029855 ##22	ENSCAFG00845029916
Dingo	MODERN SPECIES	314	ENSCAFG00020026394	SGMS1 (ENSCAFG00020026380)	MINPP1 (ENSCAFG00020026367)	PAPSS2 (ENSCAFG00020026146)	ATAD1 (ENSCAFG00020026105)	ENSCAFG00020026101	RNLS (ENSCAFG00020026098)	LIPJ (ENSCAFG00020026085)	LIPF (ENSCAFG00020026084)	LIPK (ENSCAFG00020026082)	LIPN (ENSCAFG00020026081)	LIPM (ENSCAFG00020026078)	ANKRD22 (ENSCAFG00020026075)	STAMBPL1 (ENSCAFG00020026069)	ACTA2 (ENSCAFG00020026066)	ENSCAFG00020026057 ##22	CH25H (ENSCAFG00020026054)	LIPA (ENSCAFG00020026052)
Red fox	MODERN SPECIES	105	ENSVVUG00000002466	SGMS1 (ENSVVUG00000002441)	MINPP1 (ENSVVUG00000002428)	PAPSS2 (ENSVVUG00000001624)	ATAD1 (ENSVVUG00000001557)	ENSVVUG00000001490	RNLS (ENSVVUG00000001422)	LIPJ (ENSVVUG00000001344)	LIPF (ENSVVUG00000001325)	LIPK (ENSVVUG00000001302)	LIPN (ENSVVUG00000001274)	LIPM (ENSVVUG00000022781)	ANKRD22 (ENSVVUG00000022777)	STAMBPL1 (ENSVVUG00000022772)	ACTA2 (ENSVVUG00000022768)	FAS (ENSVVUG00000022760) ##22	CH25H (ENSVVUG00000022756)	LIPA (ENSVVUG00000022747)
Felidae	ANCESTRAL SPECIES	14	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000159981	ENSGT00940000162173.d	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324	ENSGT00940000154906.C.d	ENSGT00940000166627	ENSGT00420000029824
Panthera	ANCESTRAL SPECIES	8	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.i	ENSGT00950000182946.c.a.d	ENSGT00940000161962	ENSGT00940000159981	ENSGT00940000162173.d.a.b	ENSGT00940000162173.d.b	ENSGT00940000162764.B	ENSGT00940000160084	ENSGT00940000161324	ENSGT00940000154906.C.d	ENSGT00940000166627	ENSGT00420000029824
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.i	ENSGT00950000182946.d.j	ENSGT00940000161962	ENSGT00940000153505.a.b.b	ENSGT00940000159981	ENSGT00940000162173.c
leopard	MODERN SPECIES	129	ENSPPRG00000012573	SGMS1 (ENSPPRG00000012692)	MINPP1 (ENSPPRG00000012884)	PAPSS2 (ENSPPRG00000013028)	ATAD1 (ENSPPRG00000013082)	PTEN (ENSPPRG00000013181)	RNLS (ENSPPRG00000013242)	LIPJ (ENSPPRG00000013293)	LIPF (ENSPPRG00000013455)	LIPK (ENSPPRG00000013508)	LIPN (ENSPPRG00000013548)	LIPM (ENSPPRG00000013576)	ANKRD22 (ENSPPRG00000013634)	STAMBPL1 (ENSPPRG00000013722)	ACTA2 (ENSPPRG00000013881)	FAS (ENSPPRG00000014153) ##22	LIPA (ENSPPRG00000014389)	IFIT2 (ENSPPRG00000014435)	IFIT3 (ENSPPRG00000014677)	ENSPPRG00000018822	ENSPPRG00000018850	ZNF248 (ENSPPRG00000014937)	ZNF25 (ENSPPRG00000014992)	ENSPPRG00000015339
lion	MODERN SPECIES	11	ENSPLOG00000022690	SGMS1 (ENSPLOG00000022705)	MINPP1 (ENSPLOG00000011089)	PAPSS2 (ENSPLOG00000011175)	ATAD1 (ENSPLOG00000011380)	PTEN (ENSPLOG00000011491)	RNLS (ENSPLOG00000011518)	LIPJ (ENSPLOG00000011664)	LIPF (ENSPLOG00000012276)	LIPK (ENSPLOG00000012367)	LIPN (ENSPLOG00000012456)	LIPM (ENSPLOG00000012499)	ANKRD22 (ENSPLOG00000012656)	STAMBPL1 (ENSPLOG00000012720)	ACTA2 (ENSPLOG00000012776)	FAS (ENSPLOG00000012843) ##22	LIPA (ENSPLOG00000012877)	ENSPLOG00000012946	ZNF37A (ENSPLOG00000012990)	CHRM3 (ENSPLOG00000013018)	ZP4 (ENSPLOG00000013047)	RYR2 (ENSPLOG00000013195)	ENSPLOG00000014003	MTR (ENSPLOG00000014090)	ACTN2 (ENSPLOG00000014697)	HEATR1 (ENSPLOG00000015107)	LGALS8 (ENSPLOG00000015207)	EDARADD (ENSPLOG00000015279)	ERO1B (ENSPLOG00000015401)	GPR137B (ENSPLOG00000015508)	NID1 (ENSPLOG00000015603)
Tiger	MODERN SPECIES	127	ENSPTIG00000011817	SGMS1 (ENSPTIG00000014788)	MINPP1 (ENSPTIG00000015094)	PAPSS2 (ENSPTIG00000015255)	ATAD1 (ENSPTIG00000015993)	PTEN (ENSPTIG00000016912)	RNLS (ENSPTIG00000017408)	LIPJ (ENSPTIG00000018227)	LIPF (ENSPTIG00000018712)	LIPK (ENSPTIG00000020041)	LIPN (ENSPTIG00000020393)	LIPM (ENSPTIG00000020658)	ANKRD22 (ENSPTIG00000020961)	STAMBPL1 (ENSPTIG00000021285)	ACTA2 (ENSPTIG00000004846)	FAS (ENSPTIG00000007063) ##22	LIPA (ENSPTIG00000007493)	IFIT2 (ENSPTIG00000008181)	IFIT3 (ENSPTIG00000009720)	IFIT1 (ENSPTIG00000005657)	ENSPTIG00000010691	ZNF248 (ENSPTIG00000010952)	ZNF25 (ENSPTIG00000011332)	ENSPTIG00000011946	ZNF37A (ENSPTIG00000014600)	CHRM3 (ENSPTIG00000005811)
Cat	MODERN SPECIES	242	ASAH2 (ENSFCAG00000030017)	SGMS1 (ENSFCAG00000015021)	MINPP1 (ENSFCAG00000032012)	PAPSS2 (ENSFCAG00000013165)	ATAD1 (ENSFCAG00000013167)	PTEN (ENSFCAG00000019200)	RNLS (ENSFCAG00000032283)	LIPJ (ENSFCAG00000009942)	LIPF (ENSFCAG00000007180)	LIPK (ENSFCAG00000007181)	LIPN (ENSFCAG00000031453)	LIPM (ENSFCAG00000007182)	ANKRD22 (ENSFCAG00000037283)	STAMBPL1 (ENSFCAG00000007184)	ACTA2 (ENSFCAG00000007186)	FAS (ENSFCAG00000033129) ##22	CH25H (ENSFCAG00000001947)	LIPA (ENSFCAG00000001948)	IFIT2 (ENSFCAG00000011708)	IFIT3 (ENSFCAG00000045013)	IFIT1 (ENSFCAG00000044201)	ENSFCAG00000046678	ZNF248 (ENSFCAG00000009055)	ENSFCAG00000053418	ZNF25 (ENSFCAG00000045391)	ENSFCAG00000048992	ENSFCAG00000035355	ENSFCAG00000042909	ENSFCAG00000039340	CHRM3 (ENSFCAG00000032034)	ZP4 (ENSFCAG00000010962)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Equus	ANCESTRAL SPECIES	9	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066.f	ENSGT00940000161066.e.a	ENSGT00940000161066.e.b	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.l	ENSGT00950000182946.d.k.a	ENSGT00950000182946.c.a.f	ENSGT00950000182946.d.k.b	ENSGT00950000182946.c.a.e	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a
Donkey	MODERN SPECIES	11	ENSEASG00005012408	PAPSS2 (ENSEASG00005012399)	ATAD1 (ENSEASG00005012394)	ENSEASG00005012374	RNLS (ENSEASG00005012372)	LIPJ (ENSEASG00005012370)	ENSEASG00005030220	ENSEASG00005012327	ENSEASG00005012364	LIPK (ENSEASG00005012312)	LIPN (ENSEASG00005012307)	LIPM (ENSEASG00005012301)	ANKRD22 (ENSEASG00005012297)	STAMBPL1 (ENSEASG00005012294)	ACTA2 (ENSEASG00005011763)	FAS (ENSEASG00005011745) ##22	CH25H (ENSEASG00005024521)	LIPA (ENSEASG00005011741)	IFIT2 (ENSEASG00005011739)	IFIT3 (ENSEASG00005011738)	ENSEASG00005011013	ENSEASG00005011014	ENSEASG00005011021	ENSEASG00005011018	ENSEASG00005011015	SLC16A12 (ENSEASG00005011023)	PANK1 (ENSEASG00005011025)	KIF20B (ENSEASG00005011035)	HTR7 (ENSEASG00005011049)	RPP30 (ENSEASG00005011050)	ANKRD1 (ENSEASG00005011051)
Horse	MODERN SPECIES		MINPP1 (ENSECAG00000012951)	ENSECAG00000049908	PAPSS2 (ENSECAG00000008426)	ATAD1 (ENSECAG00000000473)	PTEN (ENSECAG00000017012)	RNLS (ENSECAG00000015523)	LIPJ (ENSECAG00000014492)	ENSECAG00000013917	ENSECAG00000009983	ENSECAG00000008026	LIPK (ENSECAG00000007409)	LIPM (ENSECAG00000022367)	ANKRD22 (ENSECAG00000022239)	STAMBPL1 (ENSECAG00000019229)	ACTA2 (ENSECAG00000015145)	FAS (ENSECAG00000013724) ##22	CH25H (ENSECAG00000004572)	IFIT2 (ENSECAG00000010185)	IFIT3 (ENSECAG00000010153)	LIPA (ENSECAG00000010840)	ENSECAG00000033029	ENSECAG00000045402	ENSECAG00000044124	ENSECAG00000004433	ENSECAG00000047393	ENSECAG00000032818	SLC16A12 (ENSECAG00000009558)	PANK1 (ENSECAG00000008032)	KIF20B (ENSECAG00000023331)	ENSECAG00000048425	HTR7 (ENSECAG00000022973)
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.m	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Greater horseshoe bat	MODERN SPECIES	7	A1CF (ENSRFEG00010020111)	ENSRFEG00010019865	SGMS1 (ENSRFEG00010019788)	ENSRFEG00010019748	MINPP1 (ENSRFEG00010019675)	ENSRFEG00010019643	PAPSS2 (ENSRFEG00010019528)	ATAD1 (ENSRFEG00010019472)	PTEN (ENSRFEG00010019405)	RNLS (ENSRFEG00010019358)	LIPK (ENSRFEG00010019342)	LIPM (ENSRFEG00010019214)	ANKRD22 (ENSRFEG00010019181)	ACTA2 (ENSRFEG00010019133)	STAMBPL1 (ENSRFEG00010019067)	ENSRFEG00010019037 ##22	LIPA (ENSRFEG00010018997)	IFIT2 (ENSRFEG00010018968)	IFIT3 (ENSRFEG00010018935)	IFIT1 (ENSRFEG00010018894)	IFIT5 (ENSRFEG00010018858)	SLC16A12 (ENSRFEG00010018846)	PANK1 (ENSRFEG00010018634)	ENSRFEG00010018605	KIF20B (ENSRFEG00010016868)	HTR7 (ENSRFEG00010016754)	RPP30 (ENSRFEG00010016677)	PCGF5 (ENSRFEG00010016595)	HECTD2 (ENSRFEG00010015920)	PPP1R3C (ENSRFEG00010015867)	FGFBP3 (ENSRFEG00010014160)
Microbat	MODERN SPECIES	1121		ENSMLUG00000022873	SGMS1 (ENSMLUG00000015671)	MINPP1 (ENSMLUG00000015941)	PAPSS2 (ENSMLUG00000002781)	ATAD1 (ENSMLUG00000002793)	ENSMLUG00000002665	ENSMLUG00000006139	LIPF (ENSMLUG00000003675)	LIPK (ENSMLUG00000003682)	LIPN (ENSMLUG00000003689)	LIPM (ENSMLUG00000003698)	ANKRD22 (ENSMLUG00000003702)	STAMBPL1 (ENSMLUG00000015481)	ACTA2 (ENSMLUG00000015509)	FAS (ENSMLUG00000015521) ##22	CH25H (ENSMLUG00000008622)	LIPA (ENSMLUG00000016705)	IFIT2 (ENSMLUG00000016645)	IFIT3 (ENSMLUG00000016653)	ENSMLUG00000016659	IFIT5 (ENSMLUG00000005766)	SLC16A12 (ENSMLUG00000005769)	PANK1 (ENSMLUG00000002554)	KIF20B (ENSMLUG00000012250)	ENSMLUG00000023811	HTR7 (ENSMLUG00000017165)
Megabat	MODERN SPECIES	837													STAMBPL1 (ENSPVAG00000004475)	ENSPVAG00000004480	ACTA2 (ENSPVAG00000004486)	FAS (ENSPVAG00000004488) ##22
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Primates	ANCESTRAL SPECIES	16	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d.o	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d.o	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.g	ENSGT00940000163053.b	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a.e	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Gorilla	MODERN SPECIES	1	ENSGGOG00000027174	MINPP1 (ENSGGOG00000007426)	PAPSS2 (ENSGGOG00000005369)	ATAD1 (ENSGGOG00000026651)	KLLN (ENSGGOG00000025668)	PTEN (ENSGGOG00000000893)	RNLS (ENSGGOG00000004474)	LIPJ (ENSGGOG00000011759)	LIPF (ENSGGOG00000022842)	LIPK (ENSGGOG00000003192)	LIPN (ENSGGOG00000003273)	LIPM (ENSGGOG00000007315)	ANKRD22 (ENSGGOG00000040380)	STAMBPL1 (ENSGGOG00000026429)	ACTA2 (ENSGGOG00000013421)	FAS (ENSGGOG00000025975) ##22	CH25H (ENSGGOG00000024451)	LIPA (ENSGGOG00000003979)	IFIT2 (ENSGGOG00000010407)	IFIT3 (ENSGGOG00000012012)	IFIT1B (ENSGGOG00000023376)	IFIT1 (ENSGGOG00000023234)	IFIT5 (ENSGGOG00000003981)	SLC16A12 (ENSGGOG00000003986)	ENSGGOG00000001160	KIF20B (ENSGGOG00000000635)	HTR7 (ENSGGOG00000016305)	RPP30 (ENSGGOG00000026917)	ANKRD1 (ENSGGOG00000008160)	PCGF5 (ENSGGOG00000042231)	HECTD2 (ENSGGOG00000010273)
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.g	ENSGT00940000163053.b	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a.e	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Human	MODERN SPECIES	1	MINPP1 (ENSG00000107789)	PAPSS2 (ENSG00000198682)	ATAD1 (ENSG00000138138)	KLLN (ENSG00000227268)	PTEN (ENSG00000171862)	ENSG00000289051	RNLS (ENSG00000184719)	LIPJ (ENSG00000204022)	LIPF (ENSG00000182333)	LIPK (ENSG00000204021)	LIPN (ENSG00000204020)	LIPM (ENSG00000173239)	ANKRD22 (ENSG00000152766)	STAMBPL1 (ENSG00000138134)	ACTA2 (ENSG00000107796)	FAS (ENSG00000026103) ##22	CH25H (ENSG00000138135)	LIPA (ENSG00000107798)	IFIT2 (ENSG00000119922)	IFIT3 (ENSG00000119917)	IFIT1B (ENSG00000204010)	IFIT1 (ENSG00000185745)	IFIT5 (ENSG00000152778)	SLC16A12 (ENSG00000152779)	PANK1 (ENSG00000152782)	KIF20B (ENSG00000138182)	HTR7 (ENSG00000148680)	RPP30 (ENSG00000148688)	ANKRD1 (ENSG00000148677)	PCGF5 (ENSG00000180628)	HECTD2 (ENSG00000165338)
Pan	ANCESTRAL SPECIES	16	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.g	ENSGT00940000163053.b	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a.e	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Bonobo	MODERN SPECIES	1	ENSPPAG00000008830	ENSPPAG00000037710	MINPP1 (ENSPPAG00000043233)	PAPSS2 (ENSPPAG00000001750)	ATAD1 (ENSPPAG00000043577)	PTEN (ENSPPAG00000029313)	RNLS (ENSPPAG00000024280)	LIPJ (ENSPPAG00000035538)	LIPF (ENSPPAG00000028504)	LIPK (ENSPPAG00000031559)	LIPN (ENSPPAG00000034641)	LIPM (ENSPPAG00000040687)	ANKRD22 (ENSPPAG00000027395)	STAMBPL1 (ENSPPAG00000025072)	ACTA2 (ENSPPAG00000041922)	FAS (ENSPPAG00000035792) ##22	CH25H (ENSPPAG00000024010)	LIPA (ENSPPAG00000037322)	IFIT2 (ENSPPAG00000027962)	IFIT3 (ENSPPAG00000031450)	IFIT1B (ENSPPAG00000011581)	IFIT1 (ENSPPAG00000026116)	IFIT5 (ENSPPAG00000004000)	SLC16A12 (ENSPPAG00000037557)	ENSPPAG00000041708	KIF20B (ENSPPAG00000031329)	HTR7 (ENSPPAG00000039449)	RPP30 (ENSPPAG00000043779)	ANKRD1 (ENSPPAG00000035386)	PCGF5 (ENSPPAG00000037314)	HECTD2 (ENSPPAG00000030085)
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000046269	MINPP1 (ENSPTRG00000002715)	PAPSS2 (ENSPTRG00000023677)	ATAD1 (ENSPTRG00000002717)	KLLN (ENSPTRG00000040977)	PTEN (ENSPTRG00000002719)	RNLS (ENSPTRG00000002720)	LIPJ (ENSPTRG00000029844)	LIPF (ENSPTRG00000002722)	LIPK (ENSPTRG00000029843)	LIPN (ENSPTRG00000029842)	LIPM (ENSPTRG00000002725)	ANKRD22 (ENSPTRG00000002726)	STAMBPL1 (ENSPTRG00000002727)	ACTA2 (ENSPTRG00000048353)	FAS (ENSPTRG00000002730) ##22	CH25H (ENSPTRG00000002731)	LIPA (ENSPTRG00000002732)	IFIT2 (ENSPTRG00000002733)	IFIT3 (ENSPTRG00000029834)	IFIT1B (ENSPTRG00000029833)	IFIT1 (ENSPTRG00000042784)	IFIT5 (ENSPTRG00000002736)	SLC16A12 (ENSPTRG00000002737)	PANK1 (ENSPTRG00000002738)	KIF20B (ENSPTRG00000022813)	HTR7 (ENSPTRG00000002741)	RPP30 (ENSPTRG00000002742)	ANKRD1 (ENSPTRG00000002743)	PCGF5 (ENSPTRG00000023952)	HECTD2 (ENSPTRG00000002747)
Orangutan	MODERN SPECIES	1	SGMS1 (ENSPPYG00000002453)	ENSPPYG00000002454	MINPP1 (ENSPPYG00000002452)	PAPSS2 (ENSPPYG00000002450)	ATAD1 (ENSPPYG00000002449)	PTEN (ENSPPYG00000002448)	RNLS (ENSPPYG00000002447)	LIPJ (ENSPPYG00000041681)	LIPF (ENSPPYG00000002445)	LIPK (ENSPPYG00000002444)	LIPN (ENSPPYG00000002443)	LIPM (ENSPPYG00000002455)	ANKRD22 (ENSPPYG00000002456)	STAMBPL1 (ENSPPYG00000002457)	ACTA2 (ENSPPYG00000002459)	FAS (ENSPPYG00000002460) ##22	CH25H (ENSPPYG00000002461)	LIPA (ENSPPYG00000002462)	IFIT2 (ENSPPYG00000002463)	IFIT3 (ENSPPYG00000002464)	IFIT1B (ENSPPYG00000002465)	IFIT1 (ENSPPYG00000002466)	IFIT5 (ENSPPYG00000041118)	SLC16A12 (ENSPPYG00000002468)	PANK1 (ENSPPYG00000002469)	KIF20B (ENSPPYG00000002471)	ENSPPYG00000041425	HTR7 (ENSPPYG00000002472)	RPP30 (ENSPPYG00000002473)	ANKRD1 (ENSPPYG00000002474)	PCGF5 (ENSPPYG00000002475)
Gibbon	MODERN SPECIES	18	ENSNLEG00000033693	SGMS1 (ENSNLEG00000012084)	MINPP1 (ENSNLEG00000012094)	PAPSS2 (ENSNLEG00000012109)	ATAD1 (ENSNLEG00000012135)	PTEN (ENSNLEG00000012141)	RNLS (ENSNLEG00000012148)	LIPJ (ENSNLEG00000012160)	LIPF (ENSNLEG00000012172)	LIPK (ENSNLEG00000012196)	LIPN (ENSNLEG00000012203)	LIPM (ENSNLEG00000012208)	ANKRD22 (ENSNLEG00000012212)	STAMBPL1 (ENSNLEG00000012216)	ACTA2 (ENSNLEG00000012233)	FAS (ENSNLEG00000012260) ##22	CH25H (ENSNLEG00000018634)	IFIT2 (ENSNLEG00000018635)	IFIT1B (ENSNLEG00000018636)	IFIT1 (ENSNLEG00000012308)	LIPA (ENSNLEG00000031920)	IFIT5 (ENSNLEG00000033953)	SLC16A12 (ENSNLEG00000012310)	ENSNLEG00000012314	KIF20B (ENSNLEG00000012326)	ENSNLEG00000035960	ENSNLEG00000012379	RPP30 (ENSNLEG00000012383)	ANKRD1 (ENSNLEG00000012395)	ENSNLEG00000034294	PCGF5 (ENSNLEG00000033917)
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00910000148753	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00910000148753	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750.a.a
Cercopithecinae_d	ANCESTRAL SPECIES	95	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00910000148753	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750.a.a	ENSGT00940000157750.b
Drill	MODERN SPECIES	210							RNLS (ENSMLEG00000028652)	LIPJ (ENSMLEG00000033724)	LIPF (ENSMLEG00000040919)	LIPK (ENSMLEG00000037013)	LIPN (ENSMLEG00000032693)	LIPM (ENSMLEG00000036888)	ANKRD22 (ENSMLEG00000007605)	ACTA2 (ENSMLEG00000035943)	STAMBPL1 (ENSMLEG00000032835)	FAS (ENSMLEG00000039677) ##22
Sooty mangabey	MODERN SPECIES	115	ENSCATG00000044947	MINPP1 (ENSCATG00000029895)	PAPSS2 (ENSCATG00000022695)	ENSCATG00000008106	KLLN (ENSCATG00000043653)	PTEN (ENSCATG00000030888)	RNLS (ENSCATG00000036219)	LIPJ (ENSCATG00000044436)	LIPF (ENSCATG00000032982)	LIPK (ENSCATG00000036197)	LIPN (ENSCATG00000044254)	LIPM (ENSCATG00000021790)	ANKRD22 (ENSCATG00000030454)	ACTA2 (ENSCATG00000037752)	STAMBPL1 (ENSCATG00000043803)	FAS (ENSCATG00000042783) ##22	LIPA (ENSCATG00000028959)	IFIT3 (ENSCATG00000022496)	IFIT1B (ENSCATG00000044735)	IFIT5 (ENSCATG00000040377)	SLC16A12 (ENSCATG00000039042)	PANK1 (ENSCATG00000037209)	ENSCATG00000016477	KIF20B (ENSCATG00000036358)	HTR7 (ENSCATG00000027814)	RPP30 (ENSCATG00000042072)	ANKRD1 (ENSCATG00000031961)	PCGF5 (ENSCATG00000045174)	HECTD2 (ENSCATG00000035693)	PPP1R3C (ENSCATG00000040666)	TNKS2 (ENSCATG00000035054)
Macaca	ANCESTRAL SPECIES	11	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.b	ENSGT00560000078481	ENSGT00550000074823.a.i.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00910000148753	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00680000100037.g.a.b.b	ENSGT00940000155896
Pig-tailed macaque	MODERN SPECIES	104	SGMS1 (ENSMNEG00000037228)	ENSMNEG00000045306	MINPP1 (ENSMNEG00000035494)	PAPSS2 (ENSMNEG00000037017)	ENSMNEG00000029738	PTEN (ENSMNEG00000028054)	RNLS (ENSMNEG00000033738)	LIPJ (ENSMNEG00000030144)	LIPF (ENSMNEG00000027700)	LIPK (ENSMNEG00000034597)	LIPN (ENSMNEG00000034373)	LIPM (ENSMNEG00000035058)	ANKRD22 (ENSMNEG00000039914)	ACTA2 (ENSMNEG00000031257)	STAMBPL1 (ENSMNEG00000036426)	FAS (ENSMNEG00000028110) ##22	LIPA (ENSMNEG00000038016)	IFIT2 (ENSMNEG00000034947)	IFIT3 (ENSMNEG00000028978)	IFIT5 (ENSMNEG00000044200)	SLC16A12 (ENSMNEG00000032571)	PANK1 (ENSMNEG00000005927)	ENSMNEG00000016798	KIF20B (ENSMNEG00000030266)	HTR7 (ENSMNEG00000038453)	ENSMNEG00000011783	RPP30 (ENSMNEG00000033838)	ANKRD1 (ENSMNEG00000045466)	ENSMNEG00000031049	PCGF5 (ENSMNEG00000041619)	HECTD2 (ENSMNEG00000043171)
Rhinopithecus	ANCESTRAL SPECIES	209	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.k	ENSGT00560000078481	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o
Golden snub-nosed monkey	MODERN SPECIES	2168	SGMS1 (ENSRROG00000045702)	ENSRROG00000039389	MINPP1 (ENSRROG00000030051)	PAPSS2 (ENSRROG00000034188)	ATAD1 (ENSRROG00000029977)	PTEN (ENSRROG00000031269)	RNLS (ENSRROG00000030191)	LIPJ (ENSRROG00000014905)	LIPF (ENSRROG00000045391)	LIPK (ENSRROG00000030986)	LIPN (ENSRROG00000042769)	LIPM (ENSRROG00000033677)	ANKRD22 (ENSRROG00000043022)	ACTA2 (ENSRROG00000034027)	STAMBPL1 (ENSRROG00000032538)	FAS (ENSRROG00000037073) ##22	CH25H (ENSRROG00000024126)	LIPA (ENSRROG00000042282)	IFIT2 (ENSRROG00000039531)	IFIT3 (ENSRROG00000032038)	ENSRROG00000032730
Black snub-nosed monkey	MODERN SPECIES	41				PHF3 (ENSRBIG00000039682)	PTP4A1 (ENSRBIG00000031415)	LGSN (ENSRBIG00000030234)	RNLS (ENSRBIG00000041557)	LIPJ (ENSRBIG00000043443)	LIPF (ENSRBIG00000040118)	LIPK (ENSRBIG00000036322)	LIPN (ENSRBIG00000035578)	LIPM (ENSRBIG00000022392)	ANKRD22 (ENSRBIG00000033150)	ACTA2 (ENSRBIG00000041162)	STAMBPL1 (ENSRBIG00000042601)	FAS (ENSRBIG00000038399) ##22	CH25H (ENSRBIG00000001134)	LIPA (ENSRBIG00000036369)	IFIT2 (ENSRBIG00000033563)	IFIT3 (ENSRBIG00000037162)
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Marmoset	MODERN SPECIES	3	SGMS1 (ENSCJAG00000005202)	MINPP1 (ENSCJAG00000005222)	ENSCJAG00000085482	PAPSS2 (ENSCJAG00000005236)	ATAD1 (ENSCJAG00000005296)	ENSCJAG00000061153	ENSCJAG00000040914	RNLS (ENSCJAG00000045289)	LIPF (ENSCJAG00000005360)	LIPK (ENSCJAG00000005403)	LIPN (ENSCJAG00000005432)	LIPM (ENSCJAG00000005454)	ANKRD22 (ENSCJAG00000052310)	STAMBPL1 (ENSCJAG00000005484)	ACTA2 (ENSCJAG00000005576)	FAS (ENSCJAG00000005615) ##22	LIPA (ENSCJAG00000005689)	IFIT3 (ENSCJAG00000005737)	IFIT1 (ENSCJAG00000005746)	ENSCJAG00000035375	ENSCJAG00000069816	IFIT5 (ENSCJAG00000011216)	SLC16A12 (ENSCJAG00000039416)	PANK1 (ENSCJAG00000011177)	KIF20B (ENSCJAG00000011110)	ENSCJAG00000085126	HTR7 (ENSCJAG00000011075)	RPP30 (ENSCJAG00000011045)	ANKRD1 (ENSCJAG00000011021)	PCGF5 (ENSCJAG00000011001)	ENSCJAG00000070442
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.o	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Bolivian squirrel monkey	MODERN SPECIES	47	SGMS1 (ENSSBOG00000024460)	MINPP1 (ENSSBOG00000024204)	PAPSS2 (ENSSBOG00000033811)	ENSSBOG00000032004	KLLN (ENSSBOG00000031183)	PTEN (ENSSBOG00000029496)	RNLS (ENSSBOG00000029748)	LIPJ (ENSSBOG00000031427)	LIPF (ENSSBOG00000025134)	LIPK (ENSSBOG00000034717)	LIPN (ENSSBOG00000033606)	LIPM (ENSSBOG00000032054)	ANKRD22 (ENSSBOG00000028251)	STAMBPL1 (ENSSBOG00000031643)	ACTA2 (ENSSBOG00000021976)	FAS (ENSSBOG00000033506) ##22	LIPA (ENSSBOG00000022968)	IFIT2 (ENSSBOG00000035689)	IFIT3 (ENSSBOG00000029768)	IFIT1B (ENSSBOG00000024690)	IFIT1 (ENSSBOG00000033954)	IFIT5 (ENSSBOG00000028582)	SLC16A12 (ENSSBOG00000031607)	PANK1 (ENSSBOG00000020171)	KIF20B (ENSSBOG00000022329)	ENSSBOG00000033637	ENSSBOG00000021832	HTR7 (ENSSBOG00000029751)	RPP30 (ENSSBOG00000025405)	ANKRD1 (ENSSBOG00000021694)	PCGF5 (ENSSBOG00000019845)
Capuchin	MODERN SPECIES	431							ENSCCAG00000025418	LIPJ (ENSCCAG00000029638)	LIPF (ENSCCAG00000021141)	LIPK (ENSCCAG00000018307)	LIPN (ENSCCAG00000034813)	LIPM (ENSCCAG00000033153)	ANKRD22 (ENSCCAG00000021685)	STAMBPL1 (ENSCCAG00000021333)	ACTA2 (ENSCCAG00000035129)	FAS (ENSCCAG00000026943) ##22	LIPA (ENSCCAG00000024186)	IFIT2 (ENSCCAG00000033012)	ENSCCAG00000002166	IFIT3 (ENSCCAG00000031633)	IFIT1 (ENSCCAG00000030213)	IFIT5 (ENSCCAG00000021215)	SLC16A12 (ENSCCAG00000028888)	ENSCCAG00000026132	PANK1 (ENSCCAG00000023907)	KIF20B (ENSCCAG00000032073)
Mas night monkey	MODERN SPECIES	1344							RNLS (ENSANAG00000032974)	LIPJ (ENSANAG00000019172)	LIPF (ENSANAG00000022937)	LIPK (ENSANAG00000035733)	LIPN (ENSANAG00000030549)	LIPM (ENSANAG00000021864)	ANKRD22 (ENSANAG00000022434)	ACTA2 (ENSANAG00000025886)	STAMBPL1 (ENSANAG00000022945)	FAS (ENSANAG00000038158) ##22	LIPA (ENSANAG00000038450)	IFIT2 (ENSANAG00000035731)	IFIT3 (ENSANAG00000034347)	IFIT1B (ENSANAG00000038456)	IFIT1 (ENSANAG00000038377)	IFIT5 (ENSANAG00000038185)	SLC16A12 (ENSANAG00000035309)	PANK1 (ENSANAG00000027836)	KIF20B (ENSANAG00000024962)	ENSANAG00000019647	ENSANAG00000036622	ENSANAG00000019434	ENSANAG00000036783	HTR7 (ENSANAG00000037604)	RPP30 (ENSANAG00000009439)
Tarsier	MODERN SPECIES	6789																FAS (ENSTSYG00000007305) ##22	ENSTSYG00000036447	LIPA (ENSTSYG00000001780)	ENSTSYG00000026129	IFIT2 (ENSTSYG00000006142)	IFIT3 (ENSTSYG00000013541)
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p.c.a	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Mouse lemur	MODERN SPECIES	6	SGMS1 (ENSMICG00000017607)	MINPP1 (ENSMICG00000004585)	PAPSS2 (ENSMICG00000003328)	ATAD1 (ENSMICG00000003338)	KLLN (ENSMICG00000036093)	PTEN (ENSMICG00000027321)	RNLS (ENSMICG00000014189)	LIPJ (ENSMICG00000014733)	LIPF (ENSMICG00000014742)	LIPK (ENSMICG00000008333)	LIPN (ENSMICG00000006496)	LIPM (ENSMICG00000033459)	ANKRD22 (ENSMICG00000006521)	STAMBPL1 (ENSMICG00000006526)	ACTA2 (ENSMICG00000006543)	FAS (ENSMICG00000006549) ##22	ENSMICG00000032183	LIPA (ENSMICG00000034453)	IFIT2 (ENSMICG00000036288)	IFIT3 (ENSMICG00000014624)	ENSMICG00000033126	ENSMICG00000032446	IFIT5 (ENSMICG00000047990)	SLC16A12 (ENSMICG00000016823)	PANK1 (ENSMICG00000016832)	ENSMICG00000030352	KIF20B (ENSMICG00000013804)	HTR7 (ENSMICG00000011996)	RPP30 (ENSMICG00000012019)	ANKRD1 (ENSMICG00000012033)	ENSMICG00000012035
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.p.c.a	ENSGT00950000182946.d.p.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Greater bamboo lemur	MODERN SPECIES	921				PAPSS2 (ENSPSMG00000003002)	ATAD1 (ENSPSMG00000002964)	ENSPSMG00000002903	RNLS (ENSPSMG00000002877)	LIPJ (ENSPSMG00000002864)	LIPF (ENSPSMG00000002855)	LIPK (ENSPSMG00000002849)	LIPN (ENSPSMG00000002834)	LIPM (ENSPSMG00000002820)	ANKRD22 (ENSPSMG00000002796)	ACTA2 (ENSPSMG00000002693)	STAMBPL1 (ENSPSMG00000002563)	FAS (ENSPSMG00000002514) ##22	CH25H (ENSPSMG00000002507)	LIPA (ENSPSMG00000002485)	IFIT2 (ENSPSMG00000002460)	IFIT3 (ENSPSMG00000002450)	IFIT1 (ENSPSMG00000002431)	IFIT5 (ENSPSMG00000002426)	SLC16A12 (ENSPSMG00000002422)	PANK1 (ENSPSMG00000002369)	KIF20B (ENSPSMG00000002308)
Coquerels sifaka	MODERN SPECIES	787	ATAD1 (ENSPCOG00000028448)	KLLN (ENSPCOG00000019117)	PTEN (ENSPCOG00000004892)	ENSPCOG00000023071	RNLS (ENSPCOG00000014278)	ENSPCOG00000027413	LIPJ (ENSPCOG00000021051)	LIPF (ENSPCOG00000027465)	LIPK (ENSPCOG00000014470)	LIPN (ENSPCOG00000021772)	LIPM (ENSPCOG00000007567)	ANKRD22 (ENSPCOG00000019553)	STAMBPL1 (ENSPCOG00000015340)	ENSPCOG00000015760	ACTA2 (ENSPCOG00000004723)	FAS (ENSPCOG00000004108) ##22	ENSPCOG00000013528	LIPA (ENSPCOG00000015519)	ENSPCOG00000015339	ENSPCOG00000007526	IFIT2 (ENSPCOG00000025792)	IFIT3 (ENSPCOG00000000039)	IFIT1 (ENSPCOG00000000411)	IFIT5 (ENSPCOG00000016774)	SLC16A12 (ENSPCOG00000014212)	PANK1 (ENSPCOG00000025267)	KIF20B (ENSPCOG00000011378)	HTR7 (ENSPCOG00000022548)	RPP30 (ENSPCOG00000017865)	ANKRD1 (ENSPCOG00000024392)	PCGF5 (ENSPCOG00000025053)
Bushbaby	MODERN SPECIES	123	ENSOGAG00000016502	SGMS1 (ENSOGAG00000028438)	ENSOGAG00000029722	MINPP1 (ENSOGAG00000015159)	PAPSS2 (ENSOGAG00000014044)	ATAD1 (ENSOGAG00000029770)	ENSOGAG00000031772	LIPJ (ENSOGAG00000015768)	LIPF (ENSOGAG00000006416)	LIPK (ENSOGAG00000006423)	LIPN (ENSOGAG00000006425)	LIPM (ENSOGAG00000006428)	ANKRD22 (ENSOGAG00000006432)	STAMBPL1 (ENSOGAG00000006433)	ACTA2 (ENSOGAG00000028125)	FAS (ENSOGAG00000006440) ##22	CH25H (ENSOGAG00000002213)	LIPA (ENSOGAG00000002214)	ENSOGAG00000026881	IFIT2 (ENSOGAG00000027677)	IFIT3 (ENSOGAG00000002215)	IFIT1 (ENSOGAG00000031058)	IFIT5 (ENSOGAG00000009660)	SLC16A12 (ENSOGAG00000009661)	ENSOGAG00000015716	KIF20B (ENSOGAG00000008980)	ENSOGAG00000030836	ENSOGAG00000026403	HTR7 (ENSOGAG00000013960)	RPP30 (ENSOGAG00000013963)	ANKRD1 (ENSOGAG00000013966)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Tree shrew	MODERN SPECIES	1830														STAMBPL1 (ENSTBEG00000017580)	ACTA2 (ENSTBEG00000017616)	ENSTBEG00000017630 ##22
Glires	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Pika	MODERN SPECIES	3894									ENSOPRG00000014925	LIPK (ENSOPRG00000014946)	LIPN (ENSOPRG00000014965)	LIPM (ENSOPRG00000014982)	STAMBPL1 (ENSOPRG00000015003)	ENSOPRG00000015016	ACTA2 (ENSOPRG00000015041)	FAS (ENSOPRG00000015065) ##22	CH25H (ENSOPRG00000015090)	LIPA (ENSOPRG00000015095)	ENSOPRG00000015105	ENSOPRG00000015110
Rabbit	MODERN SPECIES	9	SGMS1 (ENSOCUG00000010965)	ENSOCUG00000035355	PAPSS2 (ENSOCUG00000012078)	ENSOCUG00000034817	ATAD1 (ENSOCUG00000012082)	PTEN (ENSOCUG00000008774)	RNLS (ENSOCUG00000010512)	LIPJ (ENSOCUG00000029546)	LIPF (ENSOCUG00000012478)	LIPK (ENSOCUG00000012487)	LIPN (ENSOCUG00000012495)	LIPM (ENSOCUG00000012505)	ANKRD22 (ENSOCUG00000004617)	STAMBPL1 (ENSOCUG00000008174)	ACTA2 (ENSOCUG00000008193)	ENSOCUG00000008202 ##22	CH25H (ENSOCUG00000000545)	LIPA (ENSOCUG00000001553)	IFIT2 (ENSOCUG00000024939)	IFIT3 (ENSOCUG00000032132)	ENSOCUG00000005445	SLC16A12 (ENSOCUG00000014498)	PANK1 (ENSOCUG00000002780)	ENSOCUG00000031325	KIF20B (ENSOCUG00000002468)	ENSOCUG00000025563	ENSOCUG00000030702	HTR7 (ENSOCUG00000016103)	RPP30 (ENSOCUG00000006896)	ANKRD1 (ENSOCUG00000006901)	PCGF5 (ENSOCUG00000012993)
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Chinese hamster chok1gshd	MODERN SPECIES	299								ENSCGRG00001012347	Lipf (ENSCGRG00001013062)	Lipk (ENSCGRG00001017429)	Lipn (ENSCGRG00001019228)	Lipm (ENSCGRG00001001485)	Ankrd22 (ENSCGRG00001005731)	Stambpl1 (ENSCGRG00001009749)	Acta2 (ENSCGRG00001010722)	Fas (ENSCGRG00001014763) ##22	Ch25h (ENSCGRG00001014081)	Lipa (ENSCGRG00001017679)	ENSCGRG00001018062	ENSCGRG00001012858	Ifit2 (ENSCGRG00001008403)	Ifit1 (ENSCGRG00001009709)	ENSCGRG00001012991	Slc16a12 (ENSCGRG00001013278)	Pank1 (ENSCGRG00001016193)	Kif20b (ENSCGRG00001019586)	Htr7 (ENSCGRG00001006968)	ENSCGRG00001017068	Ankrd1 (ENSCGRG00001019357)	Pcgf5 (ENSCGRG00001010288)	Hectd2 (ENSCGRG00001015774)
Golden Hamster	MODERN SPECIES	617	Asah2 (ENSMAUG00000010836)	Sgms1 (ENSMAUG00000006208)	Minpp1 (ENSMAUG00000009515)	Papss2 (ENSMAUG00000007484)	ENSMAUG00000007578	ENSMAUG00000006159	Rnls (ENSMAUG00000006476)	ENSMAUG00000004988	Lipf (ENSMAUG00000006602)	Lipk (ENSMAUG00000008826)	Lipn (ENSMAUG00000009129)	Lipm (ENSMAUG00000006798)	Ankrd22 (ENSMAUG00000005961)	ENSMAUG00000004326	Acta2 (ENSMAUG00000007124)	Fas (ENSMAUG00000008875) ##22	Ch25h (ENSMAUG00000001529)	Lipa (ENSMAUG00000004120)	Ifit2 (ENSMAUG00000004507)	ENSMAUG00000004294	ENSMAUG00000004543	ENSMAUG00000006010	Slc16a12 (ENSMAUG00000005932)	Pank1 (ENSMAUG00000004211)	Kif20b (ENSMAUG00000003707)	Htr7 (ENSMAUG00000008537)	Rpp30 (ENSMAUG00000008797)	Ankrd1 (ENSMAUG00000004256)	Pcgf5 (ENSMAUG00000006268)	Hectd2 (ENSMAUG00000005723)	Ppp1r3c (ENSMAUG00000021890)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Northern American deer mouse	MODERN SPECIES		Prkg1 (ENSPEMG00000031063)	A1cf (ENSPEMG00000015021)	Asah2 (ENSPEMG00000012455)	Sgms1 (ENSPEMG00000024113)	Minpp1 (ENSPEMG00000022911)	Lipo1 (ENSPEMG00000008709)	ENSPEMG00000028099	ENSPEMG00000028512	Lipf (ENSPEMG00000010733)	Lipk (ENSPEMG00000008965)	Lipn (ENSPEMG00000018314)	Lipm (ENSPEMG00000020501)	Ankrd22 (ENSPEMG00000017012)	Stambpl1 (ENSPEMG00000005840)	Acta2 (ENSPEMG00000000128)	Fas (ENSPEMG00000000158) ##22	Ch25h (ENSPEMG00000014530)	Lipa (ENSPEMG00000014276)	Ifit2 (ENSPEMG00000008813)	ENSPEMG00000029751	ENSPEMG00000014943	ENSPEMG00000000359	ENSPEMG00000024487	ENSPEMG00000024463	ENSPEMG00000029363	Htr7 (ENSPEMG00000011829)	Rpp30 (ENSPEMG00000001948)	Ankrd1 (ENSPEMG00000013995)	Pcgf5 (ENSPEMG00000008664)	Hectd2 (ENSPEMG00000008243)	Ppp1r3c (ENSPEMG00000025122)
Prairie vole	MODERN SPECIES	16	Sgms1 (ENSMOCG00000021620)	Minpp1 (ENSMOCG00000003112)	ENSMOCG00000001064	Papss2 (ENSMOCG00000001274)	Atad1 (ENSMOCG00000013771)	ENSMOCG00000002138	ENSMOCG00000002723	Rnls (ENSMOCG00000004956)	Lipf (ENSMOCG00000013237)	Lipk (ENSMOCG00000015423)	Lipn (ENSMOCG00000021083)	Lipm (ENSMOCG00000012585)	Ankrd22 (ENSMOCG00000022828)	Stambpl1 (ENSMOCG00000003028)	Acta2 (ENSMOCG00000022350)	Fas (ENSMOCG00000000870) ##22	Ch25h (ENSMOCG00000010445)	Lipa (ENSMOCG00000018201)	Ifit2 (ENSMOCG00000016497)	ENSMOCG00000011659	ENSMOCG00000021284	ENSMOCG00000004601	Slc16a12 (ENSMOCG00000002695)	Pank1 (ENSMOCG00000004723)	ENSMOCG00000020477	ENSMOCG00000022098	Kif20b (ENSMOCG00000001261)	Htr7 (ENSMOCG00000008428)	Rpp30 (ENSMOCG00000016872)	Ankrd1 (ENSMOCG00000006428)	Pcgf5 (ENSMOCG00000010451)
Murinae	ANCESTRAL SPECIES		ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Mus	ANCESTRAL SPECIES		ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304	ENSGT00940000157750
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d.w.d	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.w.c	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000192304
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b.c.a	ENSGT00950000182946.d.w.d	ENSGT00950000182946.c.b.b.c.b	ENSGT00950000182946.d.w.c	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b.d	ENSGT00950000182946.d.w.c	ENSGT00950000182946.d.w.d	ENSGT00950000182946.c.b.b.c.a	ENSGT00950000182946.d.x	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896
Steppe mouse	MODERN SPECIES	2929							ENSMSIG00000005253	ENSMSIG00000005259	Lipf (ENSMSIG00000005278)	Lipk (ENSMSIG00000005308)	Lipn (ENSMSIG00000005341)	Lipm (ENSMSIG00000005368)	Ankrd22 (ENSMSIG00000005423)	Stambpl1 (ENSMSIG00000005449)	Acta2 (ENSMSIG00000005474)	Fas (ENSMSIG00000005515) ##22	ENSMSIG00000005552	Ch25h (ENSMSIG00000005562)	Lipa (ENSMSIG00000005571)	Ifit2 (ENSMSIG00000005599)	ENSMSIG00000005627	Ifit1bl2 (ENSMSIG00000005648)	ENSMSIG00000005667	Ifit1 (ENSMSIG00000005675)	Slc16a12 (ENSMSIG00000005690)	Pank1 (ENSMSIG00000005720)	Kif20b (ENSMSIG00000005797)
spretus	MODERN SPECIES	10	Asah2 (MGP_SPRETEiJ_G0023793)	Sgms1 (MGP_SPRETEiJ_G0023794)	Minpp1 (MGP_SPRETEiJ_G0023795)	Papss2 (MGP_SPRETEiJ_G0023796)	Atad1 (MGP_SPRETEiJ_G0023797)	MGP_SPRETEiJ_G0023798	Rnls (MGP_SPRETEiJ_G0023799)	Lipo1 (MGP_SPRETEiJ_G0023800)	Lipf (MGP_SPRETEiJ_G0023802)	Lipk (MGP_SPRETEiJ_G0023803)	Lipn (MGP_SPRETEiJ_G0023804)	Lipm (MGP_SPRETEiJ_G0023805)	Ankrd22 (MGP_SPRETEiJ_G0023806)	Stambpl1 (MGP_SPRETEiJ_G0023807)	Acta2 (MGP_SPRETEiJ_G0023808)	Fas (MGP_SPRETEiJ_G0023809) ##22	Ch25h (MGP_SPRETEiJ_G0023810)	Lipa (MGP_SPRETEiJ_G0023811)	Ifit2 (MGP_SPRETEiJ_G0023812)	Ifit1bl1 (MGP_SPRETEiJ_G0023813)	MGP_SPRETEiJ_G0023814	MGP_SPRETEiJ_G0023815	Ifit1 (MGP_SPRETEiJ_G0023816)	Slc16a12 (MGP_SPRETEiJ_G0023817)	Pank1 (MGP_SPRETEiJ_G0023818)	Kif20b (MGP_SPRETEiJ_G0023819)	Htr7 (MGP_SPRETEiJ_G0023820)	Rpp30 (MGP_SPRETEiJ_G0023821)	Ankrd1 (MGP_SPRETEiJ_G0023822)	Pcgf5 (MGP_SPRETEiJ_G0023823)	Hectd2 (MGP_SPRETEiJ_G0023824)
Mouse	MODERN SPECIES	10	ENSMUSG00000121574	ENSMUSG00000121573	Rnls (ENSMUSG00000071573)	Lipo4 (ENSMUSG00000079344)	Lipo3 (ENSMUSG00000024766)	Gm8978 (ENSMUSG00000086812)	Lipo2 (ENSMUSG00000087303)	Lipo1 (ENSMUSG00000079342)	Lipf (ENSMUSG00000024768)	Lipk (ENSMUSG00000024771)	Lipn (ENSMUSG00000024770)	Lipm (ENSMUSG00000056078)	Ankrd22 (ENSMUSG00000024774)	Stambpl1 (ENSMUSG00000024776)	Acta2 (ENSMUSG00000035783)	Fas (ENSMUSG00000024778) ##22	Ch25h (ENSMUSG00000050370)	Lipa (ENSMUSG00000024781)	Ifit2 (ENSMUSG00000045932)	Ifit3 (ENSMUSG00000074896)	Ifit1bl1 (ENSMUSG00000079339)	Ifit3b (ENSMUSG00000062488)	Ifit1bl2 (ENSMUSG00000067297)	Ifit1 (ENSMUSG00000034459)	Slc16a12 (ENSMUSG00000009378)	Pank1 (ENSMUSG00000033610)	Kif20b (ENSMUSG00000024795)	Htr7 (ENSMUSG00000024798)	Rpp30 (ENSMUSG00000024800)	Ankrd1 (ENSMUSG00000024803)	Pcgf5 (ENSMUSG00000024805)
Ryukyu mouse	MODERN SPECIES	10	A1cf (MGP_CAROLIEiJ_G0022873)	Asah2 (MGP_CAROLIEiJ_G0022874)	Sgms1 (MGP_CAROLIEiJ_G0022875)	Minpp1 (MGP_CAROLIEiJ_G0022876)	Papss2 (MGP_CAROLIEiJ_G0022877)	Atad1 (MGP_CAROLIEiJ_G0022878)	MGP_CAROLIEiJ_G0022879	Rnls (MGP_CAROLIEiJ_G0022880)	Lipf (MGP_CAROLIEiJ_G0022882)	Lipk (MGP_CAROLIEiJ_G0022883)	Lipn (MGP_CAROLIEiJ_G0022884)	Lipm (MGP_CAROLIEiJ_G0022885)	Ankrd22 (MGP_CAROLIEiJ_G0022886)	Stambpl1 (MGP_CAROLIEiJ_G0022887)	Acta2 (MGP_CAROLIEiJ_G0022888)	Fas (MGP_CAROLIEiJ_G0022889) ##22	Ch25h (MGP_CAROLIEiJ_G0022890)	Lipa (MGP_CAROLIEiJ_G0022891)	Ifit2 (MGP_CAROLIEiJ_G0022892)	MGP_CAROLIEiJ_G0022893	MGP_CAROLIEiJ_G0022894	MGP_CAROLIEiJ_G0022895	MGP_CAROLIEiJ_G0022896	Ifit1 (MGP_CAROLIEiJ_G0022897)	Slc16a12 (MGP_CAROLIEiJ_G0022898)	Pank1 (MGP_CAROLIEiJ_G0022899)	Kif20b (MGP_CAROLIEiJ_G0022900)	Htr7 (MGP_CAROLIEiJ_G0022901)	Rpp30 (MGP_CAROLIEiJ_G0022902)	Ankrd1 (MGP_CAROLIEiJ_G0022903)	Pcgf5 (MGP_CAROLIEiJ_G0022904)
Shrew mouse	MODERN SPECIES		Sgms1 (MGP_PahariEiJ_G0014368)	Minpp1 (MGP_PahariEiJ_G0014369)	MGP_PahariEiJ_G0014370	Atad1 (MGP_PahariEiJ_G0014371)	MGP_PahariEiJ_G0014372	MGP_PahariEiJ_G0014373	Lipo1 (MGP_PahariEiJ_G0014374)	MGP_PahariEiJ_G0014376	Lipf (MGP_PahariEiJ_G0014377)	Lipk (MGP_PahariEiJ_G0014378)	Lipn (MGP_PahariEiJ_G0014379)	Lipm (MGP_PahariEiJ_G0014380)	Ankrd22 (MGP_PahariEiJ_G0014381)	MGP_PahariEiJ_G0014382	Acta2 (MGP_PahariEiJ_G0014383)	MGP_PahariEiJ_G0014384 ##22	Ch25h (MGP_PahariEiJ_G0014385)	Lipa (MGP_PahariEiJ_G0014386)	Ifit2 (MGP_PahariEiJ_G0014387)	MGP_PahariEiJ_G0014388	MGP_PahariEiJ_G0014389	MGP_PahariEiJ_G0014390	MGP_PahariEiJ_G0014391	Ifit1 (MGP_PahariEiJ_G0014392)	Slc16a12 (MGP_PahariEiJ_G0014393)	Pank1 (MGP_PahariEiJ_G0014394)	Kif20b (MGP_PahariEiJ_G0014395)	Htr7 (MGP_PahariEiJ_G0014396)	Rpp30 (MGP_PahariEiJ_G0014397)	Ankrd1 (MGP_PahariEiJ_G0014398)	Pcgf5 (MGP_PahariEiJ_G0014399)
Rat	MODERN SPECIES		Minpp1 (ENSRNOG00000011287)	Papss2 (ENSRNOG00000011068)	Atad1 (ENSRNOG00000010861)	Pten (ENSRNOG00000020723)	AC094647.1 (ENSRNOG00000055176)	Rnls (ENSRNOG00000020705)	Lipo1 (ENSRNOG00000025444)	Lipj (ENSRNOG00000049161)	Lipf (ENSRNOG00000019448)	Lipk (ENSRNOG00000019409)	Lipn (ENSRNOG00000057173)	Lipm (ENSRNOG00000019301)	Ankrd22 (ENSRNOG00000019190)	Stambpl1 (ENSRNOG00000050224)	Acta2 (ENSRNOG00000058039)	Fas (ENSRNOG00000019142) ##22	Ch25h (ENSRNOG00000019141)	Lipa (ENSRNOG00000019077)	Ifit2 (ENSRNOG00000036604)	Ifit3 (ENSRNOG00000022839)	Ifit1bl (ENSRNOG00000036603)	Ifit1 (ENSRNOG00000019050)	Slc16a12 (ENSRNOG00000021916)	Pank1 (ENSRNOG00000018944)	Kif20b (ENSRNOG00000018929)	ENSRNOG00000067512	ENSRNOG00000065783	Htr7 (ENSRNOG00000018827)	Rpp30 (ENSRNOG00000018718)	Ankrd1 (ENSRNOG00000018598)	Pcgf5 (ENSRNOG00000018532)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1014	Sgms1 (ENSNGAG00000010973)	Minpp1 (ENSNGAG00000008682)	Papss2 (ENSNGAG00000007513)	ENSNGAG00000002931	ENSNGAG00000017270	ENSNGAG00000014655	Rnls (ENSNGAG00000011466)	ENSNGAG00000012069	Lipf (ENSNGAG00000009032)	Lipk (ENSNGAG00000000514)	Lipn (ENSNGAG00000005809)	Lipm (ENSNGAG00000002563)	Ankrd22 (ENSNGAG00000000361)	ENSNGAG00000020255	Acta2 (ENSNGAG00000019417)	Fas (ENSNGAG00000017140) ##22	Lipa (ENSNGAG00000015250)	Ifit2 (ENSNGAG00000014540)	ENSNGAG00000013809	ENSNGAG00000013193	ENSNGAG00000018302
Lesser Egyptian jerboa	MODERN SPECIES	50	Sgms1 (ENSJJAG00000017890)	Minpp1 (ENSJJAG00000024428)	Papss2 (ENSJJAG00000015775)	Atad1 (ENSJJAG00000008539)	ENSJJAG00000017701	Rnls (ENSJJAG00000019270)	Lipo1 (ENSJJAG00000017046)	Lipf (ENSJJAG00000020561)	Lipk (ENSJJAG00000016965)	Lipn (ENSJJAG00000017640)	ENSJJAG00000012068	Lipm (ENSJJAG00000016479)	Ankrd22 (ENSJJAG00000022505)	ENSJJAG00000010334	Acta2 (ENSJJAG00000012960)	ENSJJAG00000012674 ##22	Ch25h (ENSJJAG00000013038)	Lipa (ENSJJAG00000014976)	ENSJJAG00000010974	Ifit2 (ENSJJAG00000019071)	ENSJJAG00000024328	Slc16a12 (ENSJJAG00000013860)	Pank1 (ENSJJAG00000023788)	ENSJJAG00000018494	Kif20b (ENSJJAG00000013969)	ENSJJAG00000022465	ENSJJAG00000013447	Htr7 (ENSJJAG00000017934)	Rpp30 (ENSJJAG00000020041)	Ankrd1 (ENSJJAG00000005637)	ENSJJAG00000012541
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d.r	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000166824.c	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000018859	ENSHGLG00000047821	PAPSS2 (ENSHGLG00000018676)	ENSHGLG00000032735	ATAD1 (ENSHGLG00000042263)	ENSHGLG00000035387	ENSHGLG00000008649	RNLS (ENSHGLG00000044945)	LIPF (ENSHGLG00000003846)	LIPK (ENSHGLG00000044960)	LIPN (ENSHGLG00000004609)	LIPM (ENSHGLG00000006060)	ANKRD22 (ENSHGLG00000012828)	STAMBPL1 (ENSHGLG00000019158)	ACTA2 (ENSHGLG00000002950)	FAS (ENSHGLG00000050483) ##22	ENSHGLG00000033440	ENSHGLG00000034458	CH25H (ENSHGLG00000048712)	ENSHGLG00000008898	ENSHGLG00000049191	IFIT2 (ENSHGLG00000009880)	ENSHGLG00000039997	IFIT3 (ENSHGLG00000049612)	ENSHGLG00000011005	ENSHGLG00000012010	IFIT5 (ENSHGLG00000043608)	SLC16A12 (ENSHGLG00000007331)	PANK1 (ENSHGLG00000010521)	ENSHGLG00000043314	ENSHGLG00000010782
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.c.b.b	ENSGT00950000182946.d.r	ENSGT00950000182946.c.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Hystricomorpha_b	ANCESTRAL SPECIES	72	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b.a	ENSGT00950000182946.d.r	ENSGT00950000182946.d.q	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Long-tailed chinchilla	MODERN SPECIES	132	SGMS1 (ENSCLAG00000011875)	MINPP1 (ENSCLAG00000010519)	ENSCLAG00000012470	PAPSS2 (ENSCLAG00000007940)	ATAD1 (ENSCLAG00000012023)	ENSCLAG00000014815	ENSCLAG00000017363	LIPJ (ENSCLAG00000008996)	LIPF (ENSCLAG00000010117)	LIPK (ENSCLAG00000009773)	LIPN (ENSCLAG00000012833)	LIPM (ENSCLAG00000009261)	ANKRD22 (ENSCLAG00000013284)	STAMBPL1 (ENSCLAG00000012073)	ACTA2 (ENSCLAG00000011268)	FAS (ENSCLAG00000010233) ##22	CH25H (ENSCLAG00000011191)	LIPA (ENSCLAG00000015247)	IFIT2 (ENSCLAG00000009587)	ENSCLAG00000008375	ENSCLAG00000009282	SLC16A12 (ENSCLAG00000008868)	PANK1 (ENSCLAG00000009547)	KIF20B (ENSCLAG00000008733)	HTR7 (ENSCLAG00000011360)	RPP30 (ENSCLAG00000008595)	ANKRD1 (ENSCLAG00000009887)	PCGF5 (ENSCLAG00000013777)	ENSCLAG00000012695	PPP1R3C (ENSCLAG00000012433)	ENSCLAG00000010844
Guinea pig	MODERN SPECIES	15			MINPP1 (ENSCPOG00000032117)	ENSCPOG00000038524	PAPSS2 (ENSCPOG00000003031)	ATAD1 (ENSCPOG00000034539)	PTEN (ENSCPOG00000023947)	ENSCPOG00000030661	LIPF (ENSCPOG00000007339)	LIPK (ENSCPOG00000007345)	LIPN (ENSCPOG00000007352)	LIPM (ENSCPOG00000001647)	ANKRD22 (ENSCPOG00000040272)	STAMBPL1 (ENSCPOG00000011578)	ACTA2 (ENSCPOG00000032916)	FAS (ENSCPOG00000040596) ##22	CH25H (ENSCPOG00000006452)	LIPA (ENSCPOG00000000962)	IFIT3 (ENSCPOG00000033428)	IFIT1B (ENSCPOG00000038041)	IFIT5 (ENSCPOG00000008531)	SLC16A12 (ENSCPOG00000009338)	PANK1 (ENSCPOG00000010351)	KIF20B (ENSCPOG00000003302)	ENSCPOG00000037619	SGMS1 (ENSCPOG00000014981)	ENSCPOG00000014978	A1CF (ENSCPOG00000009807)	PRKG1 (ENSCPOG00000005830)	CSTF2T (ENSCPOG00000004195)	ENSCPOG00000013634
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22
Marmotini	ANCESTRAL SPECIES	107	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22
Marmotini_b	ANCESTRAL SPECIES	200	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22
Arctic ground squirrel	MODERN SPECIES	825														STAMBPL1 (ENSUPAG00010000777)	ACTA2 (ENSUPAG00010000762)	FAS (ENSUPAG00010000734) ##22
Alpin marmot	MODERN SPECIES	57	ENSMMMG00000018616	SGMS1 (ENSMMMG00000018607)	MINPP1 (ENSMMMG00000018583)	PAPSS2 (ENSMMMG00000018529)	ENSMMMG00000018524	ATAD1 (ENSMMMG00000018512)	PTEN (ENSMMMG00000018507)	RNLS (ENSMMMG00000018475)	LIPF (ENSMMMG00000018417)	LIPK (ENSMMMG00000018400)	LIPN (ENSMMMG00000018385)	LIPM (ENSMMMG00000018373)	ANKRD22 (ENSMMMG00000018351)	STAMBPL1 (ENSMMMG00000018314)	ACTA2 (ENSMMMG00000018299)	FAS (ENSMMMG00000018289) ##22	ENSMMMG00000018286	ENSMMMG00000018269	ENSMMMG00000018259	PCDH15 (ENSMMMG00000017658)	ENSMMMG00000017629
Eurasian red squirrel	MODERN SPECIES	13	SGMS1 (ENSSVLG00005005589)	MINPP1 (ENSSVLG00005005659)	PAPSS2 (ENSSVLG00005005742)	ENSSVLG00005005787	ATAD1 (ENSSVLG00005005817)	PTEN (ENSSVLG00005005867)	RNLS (ENSSVLG00005005885)	LIPF (ENSSVLG00005005918)	LIPK (ENSSVLG00005006013)	ENSSVLG00005006077	LIPN (ENSSVLG00005006105)	LIPM (ENSSVLG00005006172)	ANKRD22 (ENSSVLG00005006223)	ENSSVLG00005006275	ACTA2 (ENSSVLG00005006334)	FAS (ENSSVLG00005006399) ##22	ENSSVLG00005006450	ENSSVLG00005006478	ENSSVLG00005006503	ENSSVLG00005006565	ENSSVLG00005006596	ENSSVLG00005006637	ENSSVLG00005006662	ENSSVLG00005006717	ENSSVLG00005000148	ENSSVLG00005000157	ENSSVLG00005000169	ENSSVLG00005000202	ENSSVLG00005000215	ENSSVLG00005000233	ENSSVLG00005000252
Marsupialia	ANCESTRAL SPECIES		ENSGT00390000015792.u	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b	ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00390000015792.u	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b	ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b	ENSGT00630000089895	ENSGT00940000162535	ENSGT00940000159002	ENSGT00530000063371.B	ENSGT00390000013399	ENSGT00530000063424.a	ENSGT00940000158045	ENSGT00940000154430	ENSGT01020000233442	ENSGT00390000014797	ENSGT00940000159140.d	ENSGT00390000009853
Diprotodontia	ANCESTRAL SPECIES	110									ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142
Diprotodontia_a	ANCESTRAL SPECIES	77							ENSGT00940000160031.k.b.a.a	ENSGT00940000161066	ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946.c.b	ENSGT00630000089895	ENSGT00940000162535	ENSGT00940000159002	ENSGT00530000063371.B	ENSGT00390000013399	ENSGT00530000063424.a	ENSGT00940000158045	ENSGT00940000154430	ENSGT01020000233442	ENSGT00390000014797	ENSGT00940000159140.d	ENSGT00390000009853
koala	MODERN SPECIES	244							ENSPCIG00000031079	ENSPCIG00000029932	ENSPCIG00000029936	ENSPCIG00000029942	LIPN (ENSPCIG00000029944)	LIPM (ENSPCIG00000029947)	ANKRD22 (ENSPCIG00000033168)	STAMBPL1 (ENSPCIG00000029952)	ACTA2 (ENSPCIG00000029954)	ENSPCIG00000016460 ##22	CH25H (ENSPCIG00000023128)	ENSPCIG00000023123	LIPA (ENSPCIG00000023124)	OAT (ENSPCIG00000014184)	NKX1-2 (ENSPCIG00000023121)	LHPP (ENSPCIG00000023115)	FAM53B (ENSPCIG00000032462)	ENSPCIG00000023109	EEF1AKMT2 (ENSPCIG00000023106)	ABRAXAS2 (ENSPCIG00000023103)	ENSPCIG00000023097	ZRANB1 (ENSPCIG00000023095)	ENSPCIG00000023084	ENSPCIG00000023079	EDRF1 (ENSPCIG00000023062)
Common wonbat	MODERN SPECIES	712								ENSVURG00010024465	ENSVURG00010024463	ENSVURG00010024443	LIPN (ENSVURG00010024435)	LIPM (ENSVURG00010024433)	ANKRD22 (ENSVURG00010024431)	STAMBPL1 (ENSVURG00010024429)	ACTA2 (ENSVURG00010024427)	ENSVURG00010024425 ##22	CH25H (ENSVURG00010024423)	LIPA (ENSVURG00010024421)	ENSVURG00010024417	OAT (ENSVURG00010024415)	LHPP (ENSVURG00010024409)	FAM53B (ENSVURG00010024406)	ENSVURG00010024401	ABRAXAS2 (ENSVURG00010024397)	ZRANB1 (ENSVURG00010024391)	ENSVURG00010024386	ENSVURG00010024381	EDRF1 (ENSVURG00010024375)	MMP21 (ENSVURG00010024369)	UROS (ENSVURG00010024364)	BCCIP (ENSVURG00010024361)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000024275	ENSSHAG00000004189	ENSSHAG00000006300	ATAD1 (ENSSHAG00000005701)	ENSSHAG00000029765	RNLS (ENSSHAG00000022125)	LIPK (ENSSHAG00000001541)	ENSSHAG00000001654	ENSSHAG00000003526	ENSSHAG00000004833	LIPN (ENSSHAG00000005830)	LIPM (ENSSHAG00000006341)	ANKRD22 (ENSSHAG00000029983)	STAMBPL1 (ENSSHAG00000002001)	ACTA2 (ENSSHAG00000000685)	ENSSHAG00000027300 ##22	CH25H (ENSSHAG00000002866)	ENSSHAG00000021168	ENSSHAG00000004628	ENSSHAG00000024220	LHPP (ENSSHAG00000005733)	FAM53B (ENSSHAG00000023228)	EEF1AKMT2 (ENSSHAG00000030367)	ABRAXAS2 (ENSSHAG00000001728)	ZRANB1 (ENSSHAG00000005534)	CTBP2 (ENSSHAG00000029146)	ENSSHAG00000027978	EDRF1 (ENSSHAG00000010162)	MMP21 (ENSSHAG00000010384)	UROS (ENSSHAG00000010468)	BCCIP (ENSSHAG00000010600)
Platypus	MODERN SPECIES	14	PRKG1 (ENSOANG00000007026)	ENSOANG00000041920	A1CF (ENSOANG00000007360)	ENSOANG00000004741	SGMS1 (ENSOANG00000013886)	ENSOANG00000041311	PAPSS2 (ENSOANG00000008206)	ATAD1 (ENSOANG00000008207)	ENSOANG00000039712	ENSOANG00000028726	ENSOANG00000019910	LIPM (ENSOANG00000000469)	ANKRD22 (ENSOANG00000000465)	STAMBPL1 (ENSOANG00000000463)	ACTA2 (ENSOANG00000000346)	ENSOANG00000041139 ##22	CH25H (ENSOANG00000002397)	LIPA (ENSOANG00000047066)	ENSOANG00000007390	SLC16A12 (ENSOANG00000001086)	PANK1 (ENSOANG00000000745)	KIF20B (ENSOANG00000000743)	HTR7 (ENSOANG00000016001)	RPP30 (ENSOANG00000003415)	ANKRD1 (ENSOANG00000012001)	HECTD2 (ENSOANG00000011999)	PPP1R3C (ENSOANG00000040004)	ENSOANG00000043159	ENSOANG00000003183	ENSOANG00000044423	SFTPD (ENSOANG00000003173)
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Aves	ANCESTRAL SPECIES	6	ENSGT00950000183015.B.b	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Japanese quail	MODERN SPECIES	24	ARHGAP22 (ENSCJPG00005018882)	WDFY4 (ENSCJPG00005018884)	LRRC18 (ENSCJPG00005018886)	VSTM4 (ENSCJPG00005018887)	C10orf71 (ENSCJPG00005018889)	DRGX (ENSCJPG00005018890)	ENSCJPG00005018891	ERCC6 (ENSCJPG00005018892)	CXCL12 (ENSCJPG00005018898)	TMEM72 (ENSCJPG00005018900)	ENSCJPG00005018902	ANKRD22 (ENSCJPG00005018903)	STAMBPL1 (ENSCJPG00005018904)	ACTA2 (ENSCJPG00005018905)	ENSCJPG00005018906	FAS (ENSCJPG00005018907) ##22	CH25H (ENSCJPG00005018912)	LIPA (ENSCJPG00005018913)	ENSCJPG00005018914	SLC16A12 (ENSCJPG00005018915)	PANK1 (ENSCJPG00005018916)	ENSCJPG00005018918	ENSCJPG00005018920	ENSCJPG00005018923	ENSCJPG00005018924	HTR7 (ENSCJPG00005018925)	RPP30 (ENSCJPG00005018926)	ANKRD1 (ENSCJPG00005018927)	PCGF5 (ENSCJPG00005018963)	ENSCJPG00005018965	HECTD2 (ENSCJPG00005018973)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.a	ENSGT00940000156410
Turkey	MODERN SPECIES	28	ARHGAP22 (ENSMGAG00000008058)	WDFY4 (ENSMGAG00000008076)	LRRC18 (ENSMGAG00000015328)	VSTM4 (ENSMGAG00000008110)	C10orf71 (ENSMGAG00000020679)	DRGX (ENSMGAG00000008122)	ERCC6 (ENSMGAG00000008132)	ENSMGAG00000008155	ENSMGAG00000008167	ENSMGAG00000018063	ENSMGAG00000008254	ANKRD22 (ENSMGAG00000008271)	ENSMGAG00000008183	STAMBPL1 (ENSMGAG00000008290)	ACTA2 (ENSMGAG00000008313)	FAS (ENSMGAG00000008349) ##22	CH25H (ENSMGAG00000015329)	LIPA (ENSMGAG00000008364)	ENSMGAG00000015330	SLC16A12 (ENSMGAG00000008389)	PANK1 (ENSMGAG00000008418)	ENSMGAG00000021389	HTR7 (ENSMGAG00000008444)	RPP30 (ENSMGAG00000008452)	ANKRD1 (ENSMGAG00000008455)	PCGF5 (ENSMGAG00000008508)	HECTD2 (ENSMGAG00000008530)	PPP1R3C (ENSMGAG00000015331)	TNKS2 (ENSMGAG00000008555)	ENSMGAG00000015332	ENSMGAG00000008661
Chicken	MODERN SPECIES	35	ARHGAP22 (ENSGALG00010020520)	WDFY4 (ENSGALG00010020109)	LRRC18 (ENSGALG00010020115)	C6H10ORF71 (ENSGALG00010020164)	VSTM4 (ENSGALG00010020193)	DRGX (ENSGALG00010020207)	ENSGALG00010020021	ERCC6 (ENSGALG00010021829)	CXCL12 (ENSGALG00010021867)	TMEM72 (ENSGALG00010021875)	ENSGALG00010021886	ANKRD22 (ENSGALG00010021999)	ENSGALG00010022012	STAMBPL1 (ENSGALG00010022022)	ACTA2 (ENSGALG00010022071)	FAS (ENSGALG00010022081) ##22	CH25H (ENSGALG00010022134)	LIPA (ENSGALG00010018011)	IFIT5 (ENSGALG00010018016)	SLC16A12 (ENSGALG00010018154)	ENSGALG00010018162	KIF20B (ENSGALG00010018177)	HTR7 (ENSGALG00010020438)	RPP30 (ENSGALG00010020481)	ANKRD1 (ENSGALG00010020507)	PCGF5 (ENSGALG00010020540)	HECTD2 (ENSGALG00010020550)	PPP1R3C (ENSGALG00010020572)	TNKS2 (ENSGALG00010020578)	DD1CR (ENSGALG00010022835)	ENSGALG00010019905
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.a
Duck	MODERN SPECIES	24	ENSAPLG00000016371	VSTM4 (ENSAPLG00000016366)	ENSAPLG00000028673	C10orf71 (ENSAPLG00000023801)	DRGX (ENSAPLG00000016357)	ENSAPLG00000028230	ERCC6 (ENSAPLG00000016335)	CXCL12 (ENSAPLG00000015341)	TMEM72 (ENSAPLG00000030711)	ENSAPLG00000015611	ENSAPLG00000001900	ANKRD22 (ENSAPLG00000001838)	ENSAPLG00000017704	STAMBPL1 (ENSAPLG00000002723)	ACTA2 (ENSAPLG00000002915)	ENSAPLG00000021208 ##22	CH25H (ENSAPLG00000002172)	LIPA (ENSAPLG00000018116)	SLC16A12 (ENSAPLG00000003860)	PANK1 (ENSAPLG00000004016)	HTR7 (ENSAPLG00000021064)	RPP30 (ENSAPLG00000009959)	ANKRD1 (ENSAPLG00000010068)	PCGF5 (ENSAPLG00000010307)	HECTD2 (ENSAPLG00000010621)	PPP1R3C (ENSAPLG00000001908)	TNKS2 (ENSAPLG00000011056)	ENSAPLG00000020120	ENSAPLG00000018936	ENSAPLG00000019728	ENSAPLG00000012116
Pink-footed goose	MODERN SPECIES	75	ARHGAP22 (ENSABRG00000012546)	LRRC18 (ENSABRG00000012545)	WDFY4 (ENSABRG00000012272)	VSTM4 (ENSABRG00000012227)	C10orf71 (ENSABRG00000012220)	DRGX (ENSABRG00000012207)	ENSABRG00000012204	ERCC6 (ENSABRG00000012181)	CXCL12 (ENSABRG00000012153)	TMEM72 (ENSABRG00000012143)	ENSABRG00000012089	ANKRD22 (ENSABRG00000012077)	ENSABRG00000012061	STAMBPL1 (ENSABRG00000012052)	ACTA2 (ENSABRG00000012041)	ENSABRG00000012026 ##22	CH25H (ENSABRG00000012002)	LIPA (ENSABRG00000011992)	ENSABRG00000011986	SLC16A12 (ENSABRG00000011979)	PANK1 (ENSABRG00000011957)	KIF20B (ENSABRG00000011871)	HTR7 (ENSABRG00000011854)	RPP30 (ENSABRG00000011826)	ANKRD1 (ENSABRG00000011807)	PCGF5 (ENSABRG00000011791)	HECTD2 (ENSABRG00000011771)	PPP1R3C (ENSABRG00000011767)	TNKS2 (ENSABRG00000011742)	ENSABRG00000011728 ##13	ENSABRG00000011723
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000156026	ENSGT00940000155684	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000157037.b.a
Golden eagle	MODERN SPECIES	2	LRRC18 (ENSACCG00020008284)	WDFY4 (ENSACCG00020008129)	VSTM4 (ENSACCG00020007960)	C10orf71 (ENSACCG00020007948)	DRGX (ENSACCG00020007939)	ENSACCG00020007922	ERCC6 (ENSACCG00020007861)	CXCL12 (ENSACCG00020007820)	TMEM72 (ENSACCG00020007811)	ENSACCG00020007802	ENSACCG00020007776	ENSACCG00020007746	ANKRD22 (ENSACCG00020007709)	STAMBPL1 (ENSACCG00020007681)	ACTA2 (ENSACCG00020007655)	FAS (ENSACCG00020007638) ##22	CH25H (ENSACCG00020007629)	LIPA (ENSACCG00020007615)	ENSACCG00020007602	SLC16A12 (ENSACCG00020007600)	PANK1 (ENSACCG00020007493)	KIF20B (ENSACCG00020007324)	HTR7 (ENSACCG00020007285)	RPP30 (ENSACCG00020007257)	ANKRD1 (ENSACCG00020007245)	PCGF5 (ENSACCG00020007220)	HECTD2 (ENSACCG00020007194)	PPP1R3C (ENSACCG00020007174)	TNKS2 (ENSACCG00020006924)	ENSACCG00020006536	TBC1D12 (ENSACCG00020006463)
Kakapo	MODERN SPECIES	22	LRRC18 (ENSSHBG00005003526)	ENSSHBG00005003533	VSTM4 (ENSSHBG00005003551)	C10orf71 (ENSSHBG00005003564)	DRGX (ENSSHBG00005003581)	ENSSHBG00005003599	ENSSHBG00005003613	CXCL12 (ENSSHBG00005003626)	TMEM72 (ENSSHBG00005003640)	ENSSHBG00005003732	ENSSHBG00005004228	ANKRD22 (ENSSHBG00005004266)	ENSSHBG00005004289	STAMBPL1 (ENSSHBG00005004317)	ACTA2 (ENSSHBG00005004323)	FAS (ENSSHBG00005004325) ##22	CH25H (ENSSHBG00005004330)	LIPA (ENSSHBG00005004334)	ENSSHBG00005004339	SLC16A12 (ENSSHBG00005004347)	PANK1 (ENSSHBG00005004351)	ENSSHBG00005004358	ENSSHBG00005004375	HTR7 (ENSSHBG00005004405)	RPP30 (ENSSHBG00005004414)	ANKRD1 (ENSSHBG00005000487)	PCGF5 (ENSSHBG00005000496)	HECTD2 (ENSSHBG00005000528)	PPP1R3C (ENSSHBG00005000546)	TNKS2 (ENSSHBG00005010339)	FGFBP3 (ENSSHBG00005010365)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.a
Great tit	MODERN SPECIES	26	ARHGAP22 (ENSPMJG00000016035)	WDFY4 (ENSPMJG00000016036)	LRRC18 (ENSPMJG00000016037)	VSTM4 (ENSPMJG00000016038)	C10orf71 (ENSPMJG00000016041)	DRGX (ENSPMJG00000016042)	ENSPMJG00000016043	ERCC6 (ENSPMJG00000016044)	CXCL12 (ENSPMJG00000016047)	TMEM72 (ENSPMJG00000016051)	ENSPMJG00000016052	ENSPMJG00000016053	ANKRD22 (ENSPMJG00000016054)	STAMBPL1 (ENSPMJG00000016055)	ACTA2 (ENSPMJG00000016056)	FAS (ENSPMJG00000016057) ##22	LIPA (ENSPMJG00000016059)	ENSPMJG00000016060	SLC16A12 (ENSPMJG00000016061)	PANK1 (ENSPMJG00000016062)	KIF20B (ENSPMJG00000000150)	HTR7 (ENSPMJG00000000502)	RPP30 (ENSPMJG00000000509)	ANKRD1 (ENSPMJG00000000521)	PCGF5 (ENSPMJG00000000534)	HECTD2 (ENSPMJG00000000588)	PPP1R3C (ENSPMJG00000000690)	TNKS2 (ENSPMJG00000000697)	ENSPMJG00000000715	TBC1D12 (ENSPMJG00000000718)	NOC3L (ENSPMJG00000000749)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000155684	ENSGT00940000156026	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.a
Flycatcher	MODERN SPECIES	25	WDFY4 (ENSFALG00000007504)	LRRC18 (ENSFALG00000015020)	VSTM4 (ENSFALG00000007538)	ENSFALG00000007552	ENSFALG00000015035	DRGX (ENSFALG00000007555)	ENSFALG00000007558	ERCC6 (ENSFALG00000007563)	ENSFALG00000007570	ENSFALG00000007576	ENSFALG00000007578	ENSFALG00000007646	ANKRD22 (ENSFALG00000028208)	STAMBPL1 (ENSFALG00000007656)	ACTA2 (ENSFALG00000007659)	FAS (ENSFALG00000007670) ##22	LIPA (ENSFALG00000007674)	ENSFALG00000007677	SLC16A12 (ENSFALG00000007681)	PANK1 (ENSFALG00000009687)	KIF20B (ENSFALG00000007702)	HTR7 (ENSFALG00000007708)	RPP30 (ENSFALG00000007711)	ANKRD1 (ENSFALG00000007718)	PCGF5 (ENSFALG00000007736)	ENSFALG00000027332	HECTD2 (ENSFALG00000007748)	PPP1R3C (ENSFALG00000015051)	TNKS2 (ENSFALG00000007782)	ENSFALG00000015069	ENSFALG00000007800
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000156026	ENSGT00940000155684.`b	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.a	ENSGT00940000156410
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000156026	ENSGT00940000155684.`b	ENSGT00390000008566	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000165321	ENSGT00940000158057	ENSGT00390000014056	ENSGT00390000006888	ENSGT00940000156860.b	ENSGT00940000156860.a.a.d.a	ENSGT00390000009005	ENSGT00940000156860.a.a.d.b	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000157037.b.a	ENSGT00940000156410
Zebra finch	MODERN SPECIES	28	LRRC18 (ENSTGUG00000008200)	ENSTGUG00000008169	VSTM4 (ENSTGUG00000008203)	C10orf71 (ENSTGUG00000026358)	DRGX (ENSTGUG00000008206)	ENSTGUG00000025450	ERCC6 (ENSTGUG00000008216)	CXCL12 (ENSTGUG00000025609)	TMEM72 (ENSTGUG00000019796)	ENSTGUG00000008255	ENSTGUG00000029151	ANKRD22 (ENSTGUG00000008300)	ENSTGUG00000021117	STAMBPL1 (ENSTGUG00000019247)	ACTA2 (ENSTGUG00000029588)	FAS (ENSTGUG00000023740) ##22	CH25H (ENSTGUG00000008317)	LIPA (ENSTGUG00000008318)	ENSTGUG00000008354	SLC16A12 (ENSTGUG00000008356)	PANK1 (ENSTGUG00000008362)	KIF20B (ENSTGUG00000008375)	HTR7 (ENSTGUG00000008388)	RPP30 (ENSTGUG00000008399)	ANKRD1 (ENSTGUG00000008417)	PCGF5 (ENSTGUG00000023549)	HECTD2 (ENSTGUG00000008456)	PPP1R3C (ENSTGUG00000008508)	TNKS2 (ENSTGUG00000008510)	ENSTGUG00000008568	TBC1D12 (ENSTGUG00000008570)
Common canary	MODERN SPECIES	7	ARHGAP22 (ENSSCAG00000017125)	ENSSCAG00000017121	LRRC18 (ENSSCAG00000017118)	WDFY4 (ENSSCAG00000017113)	VSTM4 (ENSSCAG00000017110)	C10orf71 (ENSSCAG00000017109)	DRGX (ENSSCAG00000017107)	ERCC6 (ENSSCAG00000017103)	CXCL12 (ENSSCAG00000017096)	TMEM72 (ENSSCAG00000017094)	ENSSCAG00000017092	ANKRD22 (ENSSCAG00000017090)	ENSSCAG00000017088	STAMBPL1 (ENSSCAG00000017087)	ACTA2 (ENSSCAG00000017084)	FAS (ENSSCAG00000017082) ##22	CH25H (ENSSCAG00000017076)	LIPA (ENSSCAG00000017074)	ENSSCAG00000017073	SLC16A12 (ENSSCAG00000017071)	PANK1 (ENSSCAG00000017068)	KIF20B (ENSSCAG00000017066)	HTR7 (ENSSCAG00000017063)	RPP30 (ENSSCAG00000017061)	ANKRD1 (ENSSCAG00000017059)	PCGF5 (ENSSCAG00000017052)	HECTD2 (ENSSCAG00000017047)	PPP1R3C (ENSSCAG00000017044)	TNKS2 (ENSSCAG00000016994)	ENSSCAG00000016923	TBC1D12 (ENSSCAG00000016920)
Medium ground finch	MODERN SPECIES	3	LRRC18 (ENSGFOG00000005606)	ENSGFOG00000005598	VSTM4 (ENSGFOG00000005592)	C10orf71 (ENSGFOG00000005586)	DRGX (ENSGFOG00000005566)	ENSGFOG00000005550	ERCC6 (ENSGFOG00000005512)	CXCL12 (ENSGFOG00000005495)	TMEM72 (ENSGFOG00000005484)	ENSGFOG00000005450	ENSGFOG00000004980	ANKRD22 (ENSGFOG00000004939)	ENSGFOG00000004363	STAMBPL1 (ENSGFOG00000004341)	ACTA2 (ENSGFOG00000004337)	FAS (ENSGFOG00000004302) ##22	CH25H (ENSGFOG00000004288)	LIPA (ENSGFOG00000004091)	ENSGFOG00000004077	SLC16A12 (ENSGFOG00000004063)	PANK1 (ENSGFOG00000004047)	KIF20B (ENSGFOG00000004017)	HTR7 (ENSGFOG00000004004)	RPP30 (ENSGFOG00000003989)	ANKRD1 (ENSGFOG00000003963)	PCGF5 (ENSGFOG00000003951)	HECTD2 (ENSGFOG00000003819)	PPP1R3C (ENSGFOG00000003798)	TNKS2 (ENSGFOG00000003647)	ENSGFOG00000003611	TBC1D12 (ENSGFOG00000003546)
African ostrich	MODERN SPECIES	720	MAPK8 (ENSSCUG00000010477)	ARHGAP22 (ENSSCUG00000010475)	LRRC18 (ENSSCUG00000010474)	WDFY4 (ENSSCUG00000010467)	VSTM4 (ENSSCUG00000010459)	C10orf71 (ENSSCUG00000010457)	DRGX (ENSSCUG00000010456)	ENSSCUG00000010454	ERCC6 (ENSSCUG00000010448)	CXCL12 (ENSSCUG00000010445)	TMEM72 (ENSSCUG00000010443)	ENSSCUG00000010440	ANKRD22 (ENSSCUG00000010439)	STAMBPL1 (ENSSCUG00000010436)	ACTA2 (ENSSCUG00000010434)	FAS (ENSSCUG00000010433) ##22	CH25H (ENSSCUG00000010431)	LIPA (ENSSCUG00000010427)	ENSSCUG00000010421	SLC16A12 (ENSSCUG00000010419)	PANK1 (ENSSCUG00000010408)	KIF20B (ENSSCUG00000010400)	HTR7 (ENSSCUG00000010397)	RPP30 (ENSSCUG00000010395)	ANKRD1 (ENSSCUG00000010393)	PCGF5 (ENSSCUG00000010388)	HECTD2 (ENSSCUG00000017089)	PPP1R3C (ENSSCUG00000017086)	TNKS2 (ENSSCUG00000017073)	ENSSCUG00000017070	ENSSCUG00000017063
Australian saltwater crocodile	MODERN SPECIES	68	ARHGAP22 (ENSCPRG00005017969)	LRRC18 (ENSCPRG00005017960)	WDFY4 (ENSCPRG00005017891)	ENSCPRG00005017859	ENSCPRG00005017855	VSTM4 (ENSCPRG00005017853)	C10orf71 (ENSCPRG00005017846)	DRGX (ENSCPRG00005017838)	ENSCPRG00005017835	ERCC6 (ENSCPRG00005017820)	CXCL12 (ENSCPRG00005017813)	ENSCPRG00005017802	ANKRD22 (ENSCPRG00005017798)	STAMBPL1 (ENSCPRG00005017791)	ACTA2 (ENSCPRG00005017787)	FAS (ENSCPRG00005017779) ##22	CH25H (ENSCPRG00005017776)	LIPA (ENSCPRG00005017773)	ENSCPRG00005017770	SLC16A12 (ENSCPRG00005017768)	PANK1 (ENSCPRG00005017765)	KIF20B (ENSCPRG00005017756)	HTR7 (ENSCPRG00005017749)	RPP30 (ENSCPRG00005017744)	ANKRD1 (ENSCPRG00005017742)	ENSCPRG00005017737	PCGF5 (ENSCPRG00005017727)	HECTD2 (ENSCPRG00005017720)	PPP1R3C (ENSCPRG00005017713)	TNKS2 (ENSCPRG00005017332)	ENSCPRG00005017257
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.t	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.t	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000156410
Emydidae	ANCESTRAL SPECIES	6	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000154696.s.b	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.t	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
Three-toed box turtle	MODERN SPECIES	39	SGMS1 (ENSTMTG00000021990)	MINPP1 (ENSTMTG00000021982)	PAPSS2 (ENSTMTG00000021970)	ATAD1 (ENSTMTG00000021964)	PTEN (ENSTMTG00000021956)	RNLS (ENSTMTG00000021952)	ENSTMTG00000021937	ENSTMTG00000021917	ENSTMTG00000021909	ENSTMTG00000021903	ENSTMTG00000021879	ENSTMTG00000021864	ANKRD22 (ENSTMTG00000021855)	STAMBPL1 (ENSTMTG00000021843)	ACTA2 (ENSTMTG00000021837)	FAS (ENSTMTG00000021830) ##22	CH25H (ENSTMTG00000021822)	LIPA (ENSTMTG00000021818)	ENSTMTG00000021813	SLC16A12 (ENSTMTG00000021807)	PANK1 (ENSTMTG00000021801)	ENSTMTG00000021794	ENSTMTG00000021790	KIF20B (ENSTMTG00000021701)	HTR7 (ENSTMTG00000021674)	RPP30 (ENSTMTG00000021670)	ANKRD1 (ENSTMTG00000021665)	PCGF5 (ENSTMTG00000021655)	HECTD2 (ENSTMTG00000021643)	PPP1R3C (ENSTMTG00000021638)	TNKS2 (ENSTMTG00000021618)
painted turtle	MODERN SPECIES	744	SGMS1 (ENSCPBG00000026467)	MINPP1 (ENSCPBG00000026469)	PAPSS2 (ENSCPBG00000026470)	ATAD1 (ENSCPBG00000026471)	PTEN (ENSCPBG00000026473)	RNLS (ENSCPBG00000026474)	ENSCPBG00000026475	ENSCPBG00000026477	ENSCPBG00000026487	ENSCPBG00000026490	ENSCPBG00000026492	ENSCPBG00000026495	ANKRD22 (ENSCPBG00000026497)	STAMBPL1 (ENSCPBG00000026498)	ACTA2 (ENSCPBG00000026499)	FAS (ENSCPBG00000026500) ##22	CH25H (ENSCPBG00000026502)	LIPA (ENSCPBG00000026503)	ENSCPBG00000026504	SLC16A12 (ENSCPBG00000026505)	ENSCPBG00000026506	PANK1 (ENSCPBG00000026507)	ENSCPBG00000026509	ENSCPBG00000026510	ENSCPBG00000026511	ENSCPBG00000026515	ENSCPBG00000026517	RPP30 (ENSCPBG00000026518)	ANKRD1 (ENSCPBG00000026520)	PCGF5 (ENSCPBG00000026522)	HECTD2 (ENSCPBG00000026524)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.t	ENSGT00950000182946.n	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911	ENSGT00940000154372.b	ENSGT00940000156410
Goode s thornscrub tortoise	MODERN SPECIES	21	SGMS1 (ENSGEVG00005007975)	MINPP1 (ENSGEVG00005007946)	PAPSS2 (ENSGEVG00005007869)	ATAD1 (ENSGEVG00005007826)	PTEN (ENSGEVG00005007804)	RNLS (ENSGEVG00005007783)	ENSGEVG00005007747	ENSGEVG00005007700	ENSGEVG00005007655	ENSGEVG00005007595	ENSGEVG00005007517	ENSGEVG00005007381	ANKRD22 (ENSGEVG00005007356)	STAMBPL1 (ENSGEVG00005007213)	ACTA2 (ENSGEVG00005007170)	FAS (ENSGEVG00005007132) ##22	CH25H (ENSGEVG00005007093)	LIPA (ENSGEVG00005006714)	ENSGEVG00005006637	SLC16A12 (ENSGEVG00005006580)	PANK1 (ENSGEVG00005006448)	KIF20B (ENSGEVG00005006327)	HTR7 (ENSGEVG00005006286)	RPP30 (ENSGEVG00005006258)	ANKRD1 (ENSGEVG00005006219)	PCGF5 (ENSGEVG00005006190)	ENSGEVG00005006118	ENSGEVG00005006071	PPP1R3C (ENSGEVG00005006048)	TNKS2 (ENSGEVG00005005969)	TBC1D12 (ENSGEVG00005019947)
Abingdon island giant tortoise	MODERN SPECIES	2758		MINPP1 (ENSCABG00000018209)	PAPSS2 (ENSCABG00000018211)	ATAD1 (ENSCABG00000018213)	PTEN (ENSCABG00000018215)	ENSCABG00000018217	ENSCABG00000018219	ENSCABG00000018221	ENSCABG00000018232	ENSCABG00000018235	ENSCABG00000018240	ENSCABG00000018256	ANKRD22 (ENSCABG00000018272)	STAMBPL1 (ENSCABG00000018279)	ENSCABG00000018336	FAS (ENSCABG00000018337) ##22	CH25H (ENSCABG00000018339)	LIPA (ENSCABG00000018340)	ENSCABG00000018341	SLC16A12 (ENSCABG00000018342)	PANK1 (ENSCABG00000018344)	KIF20B (ENSCABG00000018346)
Chinese turtle	MODERN SPECIES	963	ENSPSIG00000010112	SGMS1 (ENSPSIG00000009989)	MINPP1 (ENSPSIG00000009907)	PAPSS2 (ENSPSIG00000009096)	ATAD1 (ENSPSIG00000008883)	ENSPSIG00000008864	RNLS (ENSPSIG00000008739)	ENSPSIG00000007794	ENSPSIG00000007788	ENSPSIG00000007218	ENSPSIG00000007101	ENSPSIG00000007094	ANKRD22 (ENSPSIG00000006757)	STAMBPL1 (ENSPSIG00000006150)	ACTA2 (ENSPSIG00000006143)	FAS (ENSPSIG00000005528) ##22	CH25H (ENSPSIG00000000687)	LIPA (ENSPSIG00000016953)	ENSPSIG00000000678	SLC16A12 (ENSPSIG00000016642)	PANK1 (ENSPSIG00000016510)	ENSPSIG00000016505	ENSPSIG00000015735	ENSPSIG00000015654	HTR7 (ENSPSIG00000015480)	RPP30 (ENSPSIG00000013213)	ANKRD1 (ENSPSIG00000012579)	ENSPSIG00000000669
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.a.b.b.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B	ENSGT00940000159911
tuatara	MODERN SPECIES	1752											ENSSPUG00000019155	ENSSPUG00000019158	ANKRD22 (ENSSPUG00000019159)	STAMBPL1 (ENSSPUG00000019163)	ENSSPUG00000019169	FAS (ENSSPUG00000019171) ##22	LIPA (ENSSPUG00000000064)	ENSSPUG00000000073	ENSSPUG00000000076	ENSSPUG00000000082	SLC16A12 (ENSSPUG00000000091)	PANK1 (ENSSPUG00000000111)	ENSSPUG00000000146	KIF20B (ENSSPUG00000000243)	HTR7 (ENSSPUG00000000584)	RPP30 (ENSSPUG00000000595)	ANKRD1 (ENSSPUG00000000739)	ENSSPUG00000000756	PCGF5 (ENSSPUG00000000770)	HECTD2 (ENSSPUG00000000797)	PPP1R3C (ENSSPUG00000000826)
Episquamata	ANCESTRAL SPECIES	2	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb	ENSGT00950000182946	ENSGT00390000015792	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb	ENSGT00950000182946	ENSGT00390000015792	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000165449	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1285												ENSACAG00000016626	R3HCC1 (ENSACAG00000016627)	ENSACAG00000016632	CHMP7 (ENSACAG00000016634)	ENSACAG00000016665 ##22	RHOBTB2 (ENSACAG00000016669)
Lizard	MODERN SPECIES	860	ENSACAG00000039229	PTEN (ENSACAG00000015101)	RNLS (ENSACAG00000015097)	ENSACAG00000014986	ENSACAG00000022178	ENSACAG00000039097	ENSACAG00000036862	ENSACAG00000033529	ENSACAG00000028781	ENSACAG00000039161	ENSACAG00000014981	ENSACAG00000014897	ANKRD22 (ENSACAG00000000760)	STAMBPL1 (ENSACAG00000000640)	ACTA2 (ENSACAG00000000475)	FAS (ENSACAG00000000472) ##22	ENSACAG00000043980	ENSACAG00000000471
Elapidae	ANCESTRAL SPECIES	4	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb.a	ENSGT00940000154696.gb.b	ENSGT00950000182946.bb.b	ENSGT00390000015792	ENSGT00950000182946.bb.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	7	DOCK5 (ENSNNAG00000010814)	NEFL (ENSNNAG00000010763)	ENSNNAG00000010639	ZAR1L (ENSNNAG00000010606)	ENSNNAG00000010003	ENSNNAG00000009894	STC1 (ENSNNAG00000009856)	NKX3-1 (ENSNNAG00000009833)	SLC25A37 (ENSNNAG00000009806)	ENTPD4 (ENSNNAG00000009746)	LOXL2 (ENSNNAG00000009688)	R3HCC1 (ENSNNAG00000009647)	ENSNNAG00000009630	ENSNNAG00000009624	CHMP7 (ENSNNAG00000009608)	ENSNNAG00000009448 ##22	RHOBTB2 (ENSNNAG00000009367)	ENSNNAG00000009346	PLEKHA2 (ENSNNAG00000009310)	TACC1 (ENSNNAG00000009229)	ENSNNAG00000009125	FGFR1 (ENSNNAG00000009007)	LETM2 (ENSNNAG00000008766)	NSD3 (ENSNNAG00000008607)	BMP1 (ENSNNAG00000008537)	PHYHIP (ENSNNAG00000008525)	POLR3D (ENSNNAG00000008260)	ENSNNAG00000008229	ENSNNAG00000008124	PIWIL2 (ENSNNAG00000007388)	SLC39A14 (ENSNNAG00000007194)
Indian cobra	MODERN SPECIES	3	ATAD1 (ENSNNAG00000017399)	PTEN (ENSNNAG00000017420)	RNLS (ENSNNAG00000017430)	ENSNNAG00000017442	ENSNNAG00000017466	ENSNNAG00000017506	ENSNNAG00000017541	ENSNNAG00000007459	ENSNNAG00000007504	ENSNNAG00000007537	ENSNNAG00000007578	ENSNNAG00000007660	ANKRD22 (ENSNNAG00000007691)	STAMBPL1 (ENSNNAG00000007709)	ACTA2 (ENSNNAG00000007755)	FAS (ENSNNAG00000007833) ##22	CH25H (ENSNNAG00000007871)	ENSNNAG00000007892	ENSNNAG00000008217	ENSNNAG00000008361	ENSNNAG00000008448	ENSNNAG00000008543	ENSNNAG00000008927	ENSNNAG00000008946	ENSNNAG00000008968	ENSNNAG00000009120	SLC16A12 (ENSNNAG00000009144)	PANK1 (ENSNNAG00000009170)	ENSNNAG00000009212	HTR7 (ENSNNAG00000009244)	RPP30 (ENSNNAG00000009305)
Elapidae_a	ANCESTRAL SPECIES								ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb.a	ENSGT00950000182946.bb.b	ENSGT00390000015792	ENSGT00950000182946.bb.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Blue-lipped sea krait	MODERN SPECIES	6447																ENSLLTG00000007879 ##22	RHOBTB2 (ENSLLTG00000007856)
Acanthophiinae	ANCESTRAL SPECIES	1							ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb.a.b	ENSGT00940000154696.gb.a.a	ENSGT00950000182946.bb.b	ENSGT00390000015792	ENSGT00950000182946.bb.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	726																ENSPTXG00000016891 ##22
Eastern brown snake	MODERN SPECIES	727																ENSPTXG00000016895 ##22
Mainland tiger snake	MODERN SPECIES	328									ENSNSUG00000018600	ENSNSUG00000018599	ENSNSUG00000018597	ENSNSUG00000018596	ENSNSUG00000018595	STAMBPL1 (ENSNSUG00000018556)	ACTA2 (ENSNSUG00000018555)	FAS (ENSNSUG00000018554) ##22
Laterata	ANCESTRAL SPECIES		ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b ##22	ENSGT00940000162142	ENSGT00940000154696.gb	ENSGT00950000182946	ENSGT00390000015792	ENSGT00940000156169	ENSGT00940000157373	ENSGT01030000236220	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00960000190922	ENSGT00940000157750	ENSGT00940000155648.B
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	6	NEFL (ENSPMRG00000017204)	NEFM (ENSPMRG00000017209)	ADAM28 (ENSPMRG00000017231)	ENSPMRG00000017268	STC1 (ENSPMRG00000017272)	ENSPMRG00000017279	NKX3-1 (ENSPMRG00000017285)	SLC25A37 (ENSPMRG00000017292)	ENTPD4 (ENSPMRG00000017312)	ENSPMRG00000017342	LOXL2 (ENSPMRG00000017343)	R3HCC1 (ENSPMRG00000017349)	ENSPMRG00000017355	ENSPMRG00000017358	CHMP7 (ENSPMRG00000017362)	ENSPMRG00000017374 ##22	RHOBTB2 (ENSPMRG00000017391)	PEBP4 (ENSPMRG00000017409)	ENSPMRG00000017414	ENSPMRG00000017418	EGR3 (ENSPMRG00000017421)	BIN3 (ENSPMRG00000017432)	CCAR2 (ENSPMRG00000017452)	ENSPMRG00000017484	ENSPMRG00000017486	PDLIM2 (ENSPMRG00000017490)	ENSPMRG00000017500	ENSPMRG00000017505	ENSPMRG00000017515	ENSPMRG00000017519	PPP3CC (ENSPMRG00000017530)
Common wall lizard	MODERN SPECIES	13	PAPSS2 (ENSPMRG00000006045)	PTEN (ENSPMRG00000006080)	ENSPMRG00000006092	ENSPMRG00000006108	ENSPMRG00000006114	ENSPMRG00000006126	ENSPMRG00000006132	ENSPMRG00000006143	ENSPMRG00000006170	ENSPMRG00000006177	ENSPMRG00000006209	ENSPMRG00000006257	ANKRD22 (ENSPMRG00000006267)	STAMBPL1 (ENSPMRG00000006272)	ACTA2 (ENSPMRG00000006278)	FAS (ENSPMRG00000006285) ##22	ENSPMRG00000006288	CH25H (ENSPMRG00000006293)	ENSPMRG00000006303	ENSPMRG00000006385	ENSPMRG00000006398	ENSPMRG00000000253	ENSPMRG00000000355	ENSPMRG00000000388	ENSPMRG00000000429	ENSPMRG00000000485	ENSPMRG00000000499	ENSPMRG00000000513	SLC16A12 (ENSPMRG00000000542)	PANK1 (ENSPMRG00000000570)	KIF20B (ENSPMRG00000000706)
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1578	ENSCMIG00000006123	PEX14 (ENSCMIG00000006118)	ENSCMIG00000006112	ENSCMIG00000006106	ENSCMIG00000006101	kif1b (ENSCMIG00000005880)	ube4b (ENSCMIG00000005764)	rbp7b (ENSCMIG00000005745)	nmnat1 (ENSCMIG00000005743)	clstn1 (ENSCMIG00000005625)	ctnnbip1 (ENSCMIG00000005566)	ENSCMIG00000005556	pik3cd (ENSCMIG00000005191)	ENSCMIG00000005092	tmem201 (ENSCMIG00000005073)	ENSCMIG00000005065 ##22	ENSCMIG00000005062	ZBTB48 (ENSCMIG00000005059)	klhl21 (ENSCMIG00000005057)	PHF13 (ENSCMIG00000005056)	ENSCMIG00000005054	dnajc11a (ENSCMIG00000005032)	ENSCMIG00000005022	CAMTA1 (ENSCMIG00000005013)	vamp3 (ENSCMIG00000005008)	ENSCMIG00000005005	PANK4 (ENSCMIG00000004866) #15	ENSCMIG00000004809	si:ch211-251b21.1 (ENSCMIG00000004807) #17	ENSCMIG00000004759	pex10 (ENSCMIG00000004729) #12
Elephant shark	MODERN SPECIES	1488	pcdh15b (ENSCMIG00000019282)	dkk1b (ENSCMIG00000019215)	ENSCMIG00000019210	A1CF (ENSCMIG00000019203)	asah2 (ENSCMIG00000019190)	sgms1a (ENSCMIG00000019185)	minpp1b (ENSCMIG00000019184)	papss2b (ENSCMIG00000019164)	atad1b (ENSCMIG00000019152)	ptenb (ENSCMIG00000019147)	rnls (ENSCMIG00000019143)	lipf (ENSCMIG00000019110)	ankrd22 (ENSCMIG00000019064)	STAMBPL1 (ENSCMIG00000019048)	acta2 (ENSCMIG00000018932)	ENSCMIG00000018889 ##22	ch25h (ENSCMIG00000018886)	ENSCMIG00000018884	slc16a12b (ENSCMIG00000018882)	pank1b (ENSCMIG00000018879)	HTR7 (ENSCMIG00000018875)	ENSCMIG00000018873	ENSCMIG00000018870	ENSCMIG00000018867	rpp30 (ENSCMIG00000018865)	ankrd1b (ENSCMIG00000018862)	pcgf5b (ENSCMIG00000018860)	HECTD2 (ENSCMIG00000018856)	ppp1r3cb (ENSCMIG00000018854)	TNKS2 (ENSCMIG00000018779)	ENSCMIG00000018733