Chordata ANCESTRAL SPECIES ENSGT00940000157843 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000157843 #22 Gnathostomata ANCESTRAL SPECIES 347 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00530000063786.b ENSGT00940000166590 ENSGT00940000160785 Euteleostomi ANCESTRAL SPECIES 360 ENSGT00940000164406 ENSGT00940000160459 ENSGT01070000253816.a.a.a ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b Sarcopterygii ANCESTRAL SPECIES 300 ENSGT00940000164406 ENSGT00940000160459 ENSGT01070000253816.a.a.a ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00950000182963.b.b ENSGT00390000005569 #23 ENSGT00530000063624.B ENSGT00940000156837 ENSGT00510000047029 Tetrapoda ANCESTRAL SPECIES 206 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b Amniota ANCESTRAL SPECIES 48 ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b Mammalia ANCESTRAL SPECIES 54 ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000153313.C.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x #23 ENSGT00390000005569.w.a ##23 ENSGT00950000182963.b.b ENSGT00510000047029 ENSGT00940000156837 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000165959 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Theria ANCESTRAL SPECIES 33 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000153313.C.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x #23 ENSGT00390000005569.w.a ##23 ENSGT00950000182963.b.b ENSGT00510000047029 ENSGT00940000156837 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Eutheria ANCESTRAL SPECIES 16 ENSGT00940000155902 #26 ENSGT00940000160087 #25 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b #23 ENSGT00390000005569.x.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Primates ANCESTRAL SPECIES 19 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g ENSGT00390000015252.h ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Catarrhini ANCESTRAL SPECIES 12 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400.e #19 ENSGT00940000165171 ENSGT00410000029400.f #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00530000063666.a.m.a.a.b ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400.e #19 ENSGT00410000029400.f #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000156281.i #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000165171 ENSGT00410000029400.f #18 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Cercopithecinae_b ANCESTRAL SPECIES 46 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000160311 #17 ENSGT00410000029400.f #18 ENSGT00940000163063 #20 ENSGT00410000029400.e #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00940000154606.`c.b Olive baboon MODERN SPECIES 792 ENSPANG00000030463 #7 ABCB7 (ENSPANG00000026346) #8 UPRT (ENSPANG00000017665) #9 ENSPANG00000001066 #10 ZDHHC15 (ENSPANG00000019929) #11 ENSPANG00000038963 #12 MAGEE2 (ENSPANG00000005315) #13 ENSPANG00000013474 #14 ENSPANG00000041868 #15 CDX4 (ENSPANG00000044820) #16 ENSPANG00000011549 #17 ENSPANG00000035979 #18 ENSPANG00000048671 #19 ENSPANG00000046739 #20 PHKA1 (ENSPANG00000014929) #21 HDAC8 (ENSPANG00000006122) #22 ENSPANG00000038920 #23 ENSPANG00000043866 #24 FGF16 (ENSPANG00000002965) #25 ATRX (ENSPANG00000024984) #26 MAGT1 (ENSPANG00000012904) #27 ENSPANG00000008508 #28 ATP7A (ENSPANG00000019286) #29 ENSPANG00000011695 #30 TAF9B (ENSPANG00000006121) #31 ENSPANG00000051297 #32 ENSPANG00000041600 #33 ENSPANG00000038489 #34 LPAR4 (ENSPANG00000014311) #35 P2RY10 (ENSPANG00000010847) #36 ENSPANG00000043750 #37 Cercopithecinae_d ANCESTRAL SPECIES 207 ENSGT00940000163063 #20 ENSGT00410000029400.f #18 ENSGT00410000029400.e #19 ENSGT00940000160311 #17 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b ENSGT00940000163191 Sooty mangabey MODERN SPECIES 412 ENSCATG00000043214 PHKA1 (ENSCATG00000033409) #21 HDAC8 (ENSCATG00000031035) #22 CITED1 (ENSCATG00000036514) ENSCATG00000029683 #23 ENSCATG00000032170 ERCC6L (ENSCATG00000038031) NHSL2 (ENSCATG00000029367) RTL5 (ENSCATG00000043303) Drill MODERN SPECIES 1261 GOLIM4 (ENSMLEG00000032160) ENSMLEG00000034698 ENSMLEG00000034654 ENSMLEG00000034097 ENSMLEG00000022728 WDR49 (ENSMLEG00000033324) SERPINI2 (ENSMLEG00000029650) ZBBX (ENSMLEG00000012570) ENSMLEG00000030656 #18 ENSMLEG00000027299 ENSMLEG00000030049 PHKA1 (ENSMLEG00000035533) #21 HDAC8 (ENSMLEG00000031268) #22 Macaca ANCESTRAL SPECIES 13 ENSGT00940000158214 #11 ENSGT00940000155266.lb #10 ENSGT01020000230412.D #9 ENSGT00940000156281.i #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000165171 ENSGT00410000029400.f #18 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Pig-tailed macaque MODERN SPECIES 337 ENSMNEG00000037004 #20 ENSMNEG00000029054 #19 ENSMNEG00000004008 ENSMNEG00000036085 PHKA1 (ENSMNEG00000038795) #21 HDAC8 (ENSMNEG00000033648) #22 CITED1 (ENSMNEG00000032803) ENSMNEG00000012820 ##23 ERCC6L (ENSMNEG00000030867) ENSMNEG00000033596 RTL5 (ENSMNEG00000037520) NHSL2 (ENSMNEG00000040254) Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000163487 #13 ENSGT00940000154465.C.p ENSGT00940000158214 #11 ENSGT00940000155266.lb #10 ENSGT01020000230412.D #9 ENSGT00940000156281.i #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.g.a.a ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m Rhesus MODERN SPECIES 327 ENSMMUG00000010418 ZCCHC13 (ENSMMUG00000053524) ENSMMUG00000064792 ENSMMUG00000063858 ENSMMUG00000051178 CHIC1 (ENSMMUG00000023236) CDX4 (ENSMMUG00000013449) #16 NAP1L2 (ENSMMUG00000004793) ENSMMUG00000009740 #17 ENSMMUG00000039929 #17 ENSMMUG00000053182 #19 ENSMMUG00000059926 #18 ENSMMUG00000057710 ENSMMUG00000055457 PHKA1 (ENSMMUG00000007593) #21 CITED1 (ENSMMUG00000003296) #22 RPS4X (ENSMMUG00000003295) #23 ERCC6L (ENSMMUG00000012957) PIN4 (ENSMMUG00000055786) RTL5 (ENSMMUG00000059483) NHSL2 (ENSMMUG00000021924) ENSMMUG00000014885 ENSMMUG00000017783 CXCR3 (ENSMMUG00000032424) GCNA (ENSMMUG00000011469) OGT (ENSMMUG00000015238) ENSMMUG00000056450 ENSMMUG00000048382 TAF1 (ENSMMUG00000005663) ENSMMUG00000054587 ITGB1BP2 (ENSMMUG00000020479) Crab-eating macaque MODERN SPECIES 175 CHIC1 (ENSMFAG00000011399) ENSMFAG00000044694 ENSMFAG00000057332 ENSMFAG00000057045 CDX4 (ENSMFAG00000053268) #16 NAP1L2 (ENSMFAG00000003271) ENSMFAG00000062023 #17 ENSMFAG00000062898 #17 ENSMFAG00000054792 #19 ENSMFAG00000048150 ENSMFAG00000034324 #18 ENSMFAG00000051621 #19 ENSMFAG00000039331 #20 ENSMFAG00000007994 PHKA1 (ENSMFAG00000038543) #21 HDAC8 (ENSMFAG00000003160) #22 ENSMFAG00000038135 ##23 ERCC6L (ENSMFAG00000045509) PIN4 (ENSMFAG00000043832) NHSL2 (ENSMFAG00000033144) ENSMFAG00000031405 ENSMFAG00000000394 ENSMFAG00000044396 CXCR3 (ENSMFAG00000031295) GCNA (ENSMFAG00000046224) OGT (ENSMFAG00000001803) ENSMFAG00000036860 ENSMFAG00000054759 ENSMFAG00000031355 ENSMFAG00000060403 ENSMFAG00000047652 Vervet Monkey MODERN SPECIES 203 ZDHHC15 (ENSCSAG00000010880) #11 UPRT (ENSCSAG00000010895) #9 ABCB7 (ENSCSAG00000010981) #8 NEXMIF (ENSCSAG00000011002) RLIM (ENSCSAG00000011014) SLC16A2 (ENSCSAG00000011031) ZCCHC13 (ENSCSAG00000000095) ENSCSAG00000000097 ENSCSAG00000011040 CHIC1 (ENSCSAG00000011042) CDX4 (ENSCSAG00000011047) #16 NAP1L2 (ENSCSAG00000000099) ENSCSAG00000000102 #17 ENSCSAG00000011069 #20 PHKA1 (ENSCSAG00000011091) #21 HDAC8 (ENSCSAG00000011100) #22 CITED1 (ENSCSAG00000011106) ENSCSAG00000011155 ##23 ERCC6L (ENSCSAG00000011173) NHSL2 (ENSCSAG00000011202) RTL5 (ENSCSAG00000000104) ENSCSAG00000011207 ENSCSAG00000011211 CXCR3 (ENSCSAG00000011214) OGT (ENSCSAG00000011228) ENSCSAG00000011236 TAF1 (ENSCSAG00000011320) ITGB1BP2 (ENSCSAG00000011356) ENSCSAG00000011364 ENSCSAG00000011368 ZMYM3 (ENSCSAG00000011407) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 486 ENSGT00940000157843.g #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ENSGT00950000182963.b.b ENSGT00940000163191 Golden snub-nosed monkey MODERN SPECIES 1818 HDAC8 (ENSRROG00000045442) #22 CITED1 (ENSRROG00000023044) ENSRROG00000037958 #23 ERCC6L (ENSRROG00000042561) ENSRROG00000017904 RTL5 (ENSRROG00000003440) NHSL2 (ENSRROG00000017791) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 694 ENSGT00940000165171 ENSGT00410000029400.f #18 ENSGT00410000029400.e #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.h.a #22 Golden snub-nosed monkey MODERN SPECIES 966 ENSRROG00000030432 #22 Black snub-nosed monkey MODERN SPECIES 274 ENSRBIG00000031391 #21 ENSRBIG00000033697 #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000157843.h.b #22 Black snub-nosed monkey MODERN SPECIES 1503 ENSRBIG00000037379 #22 Hominoidea ANCESTRAL SPECIES 16 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.g.b ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400.a #18 ENSGT00410000029400.b #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.g.b ENSGT00390000015252.h ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400.a #18 ENSGT00410000029400.b #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.g.b ENSGT00390000015252.h.a ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000165171.a ENSGT00940000165171.b ENSGT00410000029400.a #18 ENSGT00410000029400.b #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.g.a.a ENSGT00390000015252.h.a ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Pan ANCESTRAL SPECIES 6 ENSGT00940000156154.b #12 ENSGT00940000158214 #11 ENSGT00940000155268.f.b.a.a.a ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 #16 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.h.a ENSGT00390000015252.g.a.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m Bonobo MODERN SPECIES 369 UPRT (ENSPPAG00000035587) #9 ABCB7 (ENSPPAG00000031273) #8 NEXMIF (ENSPPAG00000015470) RLIM (ENSPPAG00000027958) SLC16A2 (ENSPPAG00000038613) ENSPPAG00000030864 ENSPPAG00000029442 ENSPPAG00000009768 CHIC1 (ENSPPAG00000038543) ENSPPAG00000038434 CDX4 (ENSPPAG00000036922) #16 ENSPPAG00000035410 ENSPPAG00000012920 #17 ENSPPAG00000042207 PHKA1 (ENSPPAG00000042021) #21 HDAC8 (ENSPPAG00000023056) #22 CITED1 (ENSPPAG00000037425) ENSPPAG00000039737 #23 ERCC6L (ENSPPAG00000031861) PIN4 (ENSPPAG00000035593) ENSPPAG00000026409 NHSL2 (ENSPPAG00000037776) ENSPPAG00000030502 ENSPPAG00000029254 CXCR3 (ENSPPAG00000042300) ENSPPAG00000041492 OGT (ENSPPAG00000030832) ENSPPAG00000027775 ENSPPAG00000017119 ENSPPAG00000039421 TAF1 (ENSPPAG00000009193) Chimpanzee MODERN SPECIES 972 RLIM (ENSPTRG00000022037) SLC16A2 (ENSPTRG00000022036) ENSPTRG00000052595 ENSPTRG00000047834 ENSPTRG00000049646 ENSPTRG00000049815 CHIC1 (ENSPTRG00000028250) ENSPTRG00000051207 CDX4 (ENSPTRG00000022032) #16 ENSPTRG00000043791 ENSPTRG00000028252 #17 ENSPTRG00000050068 #18 ENSPTRG00000048543 #18 ENSPTRG00000045935 PHKA1 (ENSPTRG00000022029) #21 HDAC8 (ENSPTRG00000051531) #22 CITED1 (ENSPTRG00000022026) RPS4X (ENSPTRG00000022025) #23 ERCC6L (ENSPTRG00000022023) PIN4 (ENSPTRG00000049495) RTL5 (ENSPTRG00000039375) NHSL2 (ENSPTRG00000028255) ENSPTRG00000050221 ENSPTRG00000044432 ENSPTRG00000046702 ENSPTRG00000047794 CXCR3 (ENSPTRG00000022018) GCNA (ENSPTRG00000022017) OGT (ENSPTRG00000049301) ENSPTRG00000045772 ENSPTRG00000044195 Human MODERN SPECIES 1827 RLIM (ENSG00000131263) SLC16A2 (ENSG00000147100) ZCCHC13 (ENSG00000187969) CHIC1 (ENSG00000204116) CDX4 (ENSG00000131264) #16 NAP1L2 (ENSG00000186462) PABPC1L2A (ENSG00000186288) #17 PABPC1L2B (ENSG00000184388) #17 FAM236A (ENSG00000275520) #18 FAM236C (ENSG00000283594) #18 DMRTC1 (ENSG00000269502) FAM236D (ENSG00000225396) #18 FAM236B (ENSG00000268994) #18 DMRTC1B (ENSG00000184911) PHKA1 (ENSG00000067177) #21 HDAC8 (ENSG00000147099) #22 ENSG00000285547 CITED1 (ENSG00000125931) RPS4X (ENSG00000198034) ##23 ERCC6L (ENSG00000186871) PIN4 (ENSG00000102309) RTL5 (ENSG00000242732) NHSL2 (ENSG00000204131) CXorf49B (ENSG00000215113) CXorf49 (ENSG00000215115) ENSG00000283599 CXCR3 (ENSG00000186810) GCNA (ENSG00000147174) OGT (ENSG00000147162) TAF1 (ENSG00000147133) ITGB1BP2 (ENSG00000147166) Gorilla MODERN SPECIES 523 ENSGGOG00000043038 ENSGGOG00000006280 CHIC1 (ENSGGOG00000010930) ENSGGOG00000037536 CDX4 (ENSGGOG00000005465) #16 ENSGGOG00000041141 NAP1L2 (ENSGGOG00000026343) ENSGGOG00000043933 #17 ENSGGOG00000038606 #17 ENSGGOG00000013219 #20 ENSGGOG00000026191 ENSGGOG00000001463 #18 ENSGGOG00000039205 #18 ENSGGOG00000024429 PHKA1 (ENSGGOG00000006781) #21 HDAC8 (ENSGGOG00000011587) #22 CITED1 (ENSGGOG00000000290) ENSGGOG00000023079 #23 ERCC6L (ENSGGOG00000022367) PIN4 (ENSGGOG00000016008) RTL5 (ENSGGOG00000037617) NHSL2 (ENSGGOG00000012481) ENSGGOG00000039791 ENSGGOG00000026973 ENSGGOG00000039521 CXCR3 (ENSGGOG00000014881) ENSGGOG00000014876 OGT (ENSGGOG00000014867) ENSGGOG00000036906 ENSGGOG00000039493 ENSGGOG00000039675 Orangutan MODERN SPECIES 242 ABCB7 (ENSPPYG00000020483) #8 NEXMIF (ENSPPYG00000020482) RLIM (ENSPPYG00000020481) SLC16A2 (ENSPPYG00000020479) ENSPPYG00000040239 ZCCHC13 (ENSPPYG00000020478) ENSPPYG00000020475 CHIC1 (ENSPPYG00000020473) CDX4 (ENSPPYG00000020472) #16 NAP1L2 (ENSPPYG00000020470) ENSPPYG00000020468 #17 ENSPPYG00000030199 #18 ENSPPYG00000020466 #18 ENSPPYG00000030578 #18 PHKA1 (ENSPPYG00000020465) #21 HDAC8 (ENSPPYG00000020464) #22 CITED1 (ENSPPYG00000032934) RPS4X (ENSPPYG00000020462) ##23 ERCC6L (ENSPPYG00000020461) PIN4 (ENSPPYG00000020460) RTL5 (ENSPPYG00000041447) NHSL2 (ENSPPYG00000020459) ENSPPYG00000035100 ENSPPYG00000035498 ENSPPYG00000020909 CXCR3 (ENSPPYG00000020458) GCNA (ENSPPYG00000020457) OGT (ENSPPYG00000020456) TAF1 (ENSPPYG00000020453) ITGB1BP2 (ENSPPYG00000020452) NONO (ENSPPYG00000020451) Gibbon MODERN SPECIES 449 ABCB7 (ENSNLEG00000001065) #8 NEXMIF (ENSNLEG00000001059) RLIM (ENSNLEG00000001050) ENSNLEG00000001044 ENSNLEG00000030978 CHIC1 (ENSNLEG00000033690) ENSNLEG00000034883 CDX4 (ENSNLEG00000001025) #16 NAP1L2 (ENSNLEG00000019044) ENSNLEG00000018128 #17 ENSNLEG00000029617 #20 ENSNLEG00000034046 #18 ENSNLEG00000029049 #18 ENSNLEG00000018125 PHKA1 (ENSNLEG00000018124) #21 HDAC8 (ENSNLEG00000018123) #22 CITED1 (ENSNLEG00000018122) ENSNLEG00000018121 #23 ERCC6L (ENSNLEG00000036284) PIN4 (ENSNLEG00000036320) ENSNLEG00000018852 RTL5 (ENSNLEG00000018851) NHSL2 (ENSNLEG00000018118) ENSNLEG00000001121 ENSNLEG00000029115 CXCR3 (ENSNLEG00000001116) ENSNLEG00000036058 OGT (ENSNLEG00000001038) ENSNLEG00000032518 ENSNLEG00000030598 TAF1 (ENSNLEG00000000934) Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000163182 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000165171 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00390000015252.h ENSGT00390000015252.g ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Cebidae ANCESTRAL SPECIES 18 ENSGT00940000160087 #25 ENSGT00940000163182 ENSGT00390000016333.s.a #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000165171 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b ENSGT00390000015252.h ENSGT00390000015252.g ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Cebidae_a ANCESTRAL SPECIES 143 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b Bolivian squirrel monkey MODERN SPECIES 255 PHKA1 (ENSSBOG00000025021) #21 HDAC8 (ENSSBOG00000025932) #22 ENSSBOG00000004798 CITED1 (ENSSBOG00000016010) ENSSBOG00000024943 #23 PIN4 (ENSSBOG00000026467) ERCC6L (ENSSBOG00000029416) NHSL2 (ENSSBOG00000024555) ENSSBOG00000028108 ENSSBOG00000029281 ENSSBOG00000030907 Capuchin MODERN SPECIES 644 HDAC8 (ENSCCAG00000026098) #22 CITED1 (ENSCCAG00000035860) RPS4X (ENSCCAG00000026154) ##23 ERCC6L (ENSCCAG00000023790) ENSCCAG00000018203 NHSL2 (ENSCCAG00000029553) Marmoset MODERN SPECIES 78 ENSCJAG00000067434 ENSCJAG00000044335 CHIC1 (ENSCJAG00000016436) CDX4 (ENSCJAG00000011367) #16 ENSCJAG00000070896 ENSCJAG00000073630 ##15 ENSCJAG00000071801 #17 ENSCJAG00000084463 #17 ENSCJAG00000074437 ENSCJAG00000081881 #18 ENSCJAG00000073913 ENSCJAG00000069950 #18 ENSCJAG00000079778 #18 ENSCJAG00000000229 #20 PHKA1 (ENSCJAG00000004244) #21 HDAC8 (ENSCJAG00000004217) #22 ENSCJAG00000081431 ENSCJAG00000058709 CITED1 (ENSCJAG00000004200) RPS4X (ENSCJAG00000004192) ##23 ERCC6L (ENSCJAG00000022332) ENSCJAG00000074350 ENSCJAG00000004992 RTL5 (ENSCJAG00000064303) NHSL2 (ENSCJAG00000005012) ENSCJAG00000084928 ##15 ENSCJAG00000086496 ENSCJAG00000032034 ENSCJAG00000032793 CXCR3 (ENSCJAG00000006395) ENSCJAG00000031514 Mas night monkey MODERN SPECIES 1018 ENSANAG00000024569 #18 ENSANAG00000032031 #18 PHKA1 (ENSANAG00000023223) #21 ENSANAG00000024193 HDAC8 (ENSANAG00000030857) #22 CITED1 (ENSANAG00000022811) ENSANAG00000026660 ##23 PIN4 (ENSANAG00000030057) ERCC6L (ENSANAG00000022378) NHSL2 (ENSANAG00000027692) CXCR3 (ENSANAG00000029785) ENSANAG00000003202 Tarsier MODERN SPECIES 6703 ENSTSYG00000037163 HDAC8 (ENSTSYG00000009589) #22 CITED1 (ENSTSYG00000002080) RPS4X (ENSTSYG00000003137) #23 ERCC6L (ENSTSYG00000013701) ENSTSYG00000035103 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000163182 ENSGT00390000016333 #14 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311.g.b #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Lemuriformes ANCESTRAL SPECIES 49 ENSGT00940000163182 ENSGT00390000016333 #14 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311.g.b #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.z ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Mouse lemur MODERN SPECIES 169 UPRT (ENSMICG00000001079) #9 ENSMICG00000014514 #8 NEXMIF (ENSMICG00000028218) RLIM (ENSMICG00000017508) SLC16A2 (ENSMICG00000043965) CHIC1 (ENSMICG00000026372) ENSMICG00000032913 CDX4 (ENSMICG00000011271) #16 ENSMICG00000047642 #17 ENSMICG00000042715 #20 ENSMICG00000043211 #18 ENSMICG00000047883 #18 PHKA1 (ENSMICG00000007902) #21 ENSMICG00000031459 ENSMICG00000028991 HDAC8 (ENSMICG00000007893) #22 CITED1 (ENSMICG00000016613) ENSMICG00000016606 #23 ERCC6L (ENSMICG00000035415) ENSMICG00000001640 NHSL2 (ENSMICG00000008280) ENSMICG00000038295 CXCR3 (ENSMICG00000038479) OGT (ENSMICG00000003078) ENSMICG00000017461 ENSMICG00000042674 ITGB1BP2 (ENSMICG00000000235) NONO (ENSMICG00000000232) ZMYM3 (ENSMICG00000014095) GJB1 (ENSMICG00000014093) NLGN3 (ENSMICG00000014073) Lemuriformes_a ANCESTRAL SPECIES 95 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Greater bamboo lemur MODERN SPECIES 961 PHKA1 (ENSPSMG00000001521) #21 HDAC8 (ENSPSMG00000002315) #22 ENSPSMG00000002985 ENSPSMG00000002988 Coquerels sifaka MODERN SPECIES 56 PHKA1 (ENSPCOG00000019881) #21 HDAC8 (ENSPCOG00000008094) #22 CITED1 (ENSPCOG00000013588) RPS4X (ENSPCOG00000027468) ##23 ERCC6L (ENSPCOG00000024286) NHSL2 (ENSPCOG00000021201) CXCR3 (ENSPCOG00000022834) OGT (ENSPCOG00000017367) ENSPCOG00000007901 ENSPCOG00000024110 ITGB1BP2 (ENSPCOG00000020946) NONO (ENSPCOG00000008197) ZMYM3 (ENSPCOG00000022189) GJB1 (ENSPCOG00000009326) NLGN3 (ENSPCOG00000015168) MED12 (ENSPCOG00000023218) IL2RG (ENSPCOG00000022304) Bushbaby MODERN SPECIES 410 PHKA1 (ENSOGAG00000016652) #21 ENSOGAG00000030470 HDAC8 (ENSOGAG00000011814) #22 CITED1 (ENSOGAG00000011810) ENSOGAG00000011808 #23 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc ENSGT00940000160693 ENSGT01030000234513.B.a Glires ANCESTRAL SPECIES 10 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Rodentia ANCESTRAL SPECIES 10 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea ANCESTRAL SPECIES 50 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT00390000015252.c.a.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.c.a.a ENSGT00390000015252.c.a.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000156489.m ENSGT00940000168699 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Golden Hamster MODERN SPECIES 727 Dmrtc1b (ENSMAUG00000010338) #20 ENSMAUG00000008738 #21 Hdac8 (ENSMAUG00000006310) #22 Cited1 (ENSMAUG00000020556) Rps4x (ENSMAUG00000013223) #23 Pin4 (ENSMAUG00000015251) Rtl5 (ENSMAUG00000009321) Nhsl2 (ENSMAUG00000013469) ENSMAUG00000007111 Cxcr3 (ENSMAUG00000006658) ENSMAUG00000015275 ENSMAUG00000010446 Taf1 (ENSMAUG00000018664) Itgb1bp2 (ENSMAUG00000007311) Nono (ENSMAUG00000016243) Zmym3 (ENSMAUG00000015148) Gjb1 (ENSMAUG00000011973) Nlgn3 (ENSMAUG00000004367) Chinese hamster chok1gshd MODERN SPECIES 16 Zcchc13 (ENSCGRG00001009786) ENSCGRG00001004584 Tsx (ENSCGRG00001005790) Chic1 (ENSCGRG00001011931) ENSCGRG00001012274 Cdx4 (ENSCGRG00001020397) #16 ENSCGRG00001012385 ENSCGRG00001007129 ENSCGRG00001015812 Eif2s3y (ENSCGRG00001016219) Nap1l2 (ENSCGRG00001003632) ENSCGRG00001023387 #17 Dmrtc1a (ENSCGRG00001018624) ENSCGRG00001024855 Phka1 (ENSCGRG00001020129) #21 Hdac8 (ENSCGRG00001022455) #22 Cited1 (ENSCGRG00001022122) Rps4x (ENSCGRG00001018159) ##23 Ercc6l (ENSCGRG00001016668) Pin4 (ENSCGRG00001023057) Nhsl2 (ENSCGRG00001018292) Rtl5 (ENSCGRG00001010452) ENSCGRG00001012656 Cxcr3 (ENSCGRG00001013701) ENSCGRG00001014167 Ogt (ENSCGRG00001011594) 8030474K03Rik (ENSCGRG00001022034) Gm4779 (ENSCGRG00001010077) Cricetidae_B ANCESTRAL SPECIES 54 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.c.a.a ENSGT00390000015252.c.a.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Prairie vole MODERN SPECIES 360 ENSMOCG00000007642 Atp11c (ENSMOCG00000002605) ENSMOCG00000012975 Gm7073 (ENSMOCG00000018667) Sox3 (ENSMOCG00000009062) ENSMOCG00000013955 Ldoc1 (ENSMOCG00000008324) ENSMOCG00000006967 #30 Magec2 (ENSMOCG00000016294) ENSMOCG00000017215 Slitrk4 (ENSMOCG00000008180) ENSMOCG00000014952 Ctag2 (ENSMOCG00000017014) ENSMOCG00000015005 Phka1 (ENSMOCG00000013482) #21 Hdac8 (ENSMOCG00000019902) #22 Cited1 (ENSMOCG00000013938) ENSMOCG00000014451 #23 Ercc6l (ENSMOCG00000021344) ENSMOCG00000000929 Nhsl2 (ENSMOCG00000002880) Rtl5 (ENSMOCG00000000142) Cxcr3 (ENSMOCG00000007041) Ogt (ENSMOCG00000013563) Taf1 (ENSMOCG00000001297) Itgb1bp2 (ENSMOCG00000021266) ENSMOCG00000005532 Zmym3 (ENSMOCG00000007682) Gjb1 (ENSMOCG00000009230) Nlgn3 (ENSMOCG00000015847) Med12 (ENSMOCG00000013807) Northern American deer mouse MODERN SPECIES 475 Zcchc13 (ENSPEMG00000030313) ENSPEMG00000028568 Tsx (ENSPEMG00000008527) Chic1 (ENSPEMG00000030446) Cdx4 (ENSPEMG00000022957) #16 ENSPEMG00000031031 ENSPEMG00000028389 ENSPEMG00000029441 #17 ENSPEMG00000026745 #17 Dmrtc1a (ENSPEMG00000009870) 1700031F05Rik (ENSPEMG00000019008) Dmrtc1b (ENSPEMG00000013412) #20 ENSPEMG00000016284 #18 ENSPEMG00000014842 Phka1 (ENSPEMG00000007806) #21 Hdac8 (ENSPEMG00000013611) #22 ENSPEMG00000029011 Cited1 (ENSPEMG00000004332) ENSPEMG00000016482 #23 Ercc6l (ENSPEMG00000007920) Pin4 (ENSPEMG00000009326) Nhsl2 (ENSPEMG00000006950) Rtl5 (ENSPEMG00000028195) 8030474K03Rik (ENSPEMG00000028164) Gm4779 (ENSPEMG00000015753) Cxcr3 (ENSPEMG00000018113) Ogt (ENSPEMG00000012399) Taf1 (ENSPEMG00000011524) ENSPEMG00000029064 Itgb1bp2 (ENSPEMG00000004183) Nono (ENSPEMG00000011150) Murinae ANCESTRAL SPECIES 14 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus ANCESTRAL SPECIES 9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus_A ANCESTRAL SPECIES 15 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus_B ANCESTRAL SPECIES 14 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT00390000015252.c.a.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Mouse MODERN SPECIES 37 Gm26992 (ENSMUSG00000098078) Tsx (ENSMUSG00000031329) Chic1 (ENSMUSG00000031327) Cdx4 (ENSMUSG00000031326) #16 Nap1l2 (ENSMUSG00000082229) 1700018G05Rik (ENSMUSG00000109745) 1700011M02Rik (ENSMUSG00000079476) #18 Dmrtc1a (ENSMUSG00000031323) 1700031F05Rik (ENSMUSG00000032894) Dmrtc1c2 (ENSMUSG00000067561) Dmrtc1c1 (ENSMUSG00000067562) Dmrtc1b (ENSMUSG00000073027) #20 Gm9112 (ENSMUSG00000079479) #18 Gm3880 (ENSMUSG00000081443) Phka1 (ENSMUSG00000034055) #21 Hdac8 (ENSMUSG00000067567) #22 Cited1 (ENSMUSG00000051159) Rps4x (ENSMUSG00000031320) #23 Ercc6l (ENSMUSG00000051220) Pin4 (ENSMUSG00000079480) Rtl5 (ENSMUSG00000049191) Nhsl2 (ENSMUSG00000079481) Gm3858 (ENSMUSG00000118638) 8030474K03Rik (ENSMUSG00000046774) Gm4779 (ENSMUSG00000045010) Cxcr3 (ENSMUSG00000050232) Ogt (ENSMUSG00000034160) Taf1 (ENSMUSG00000031314) Itgb1bp2 (ENSMUSG00000031312) Nono (ENSMUSG00000031311) Zmym3 (ENSMUSG00000031310) Mus_C ANCESTRAL SPECIES 22 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00410000029400 #18 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.d ENSGT00390000015252.c.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a spretus MODERN SPECIES 19 Abcb7 (MGP_SPRETEiJ_G0034479) #8 Nexmif (MGP_SPRETEiJ_G0034478) Rlim (MGP_SPRETEiJ_G0034477) Slc16a2 (MGP_SPRETEiJ_G0034476) Zcchc13 (MGP_SPRETEiJ_G0034475) MGP_SPRETEiJ_G0034474 Tsx (MGP_SPRETEiJ_G0034473) Chic1 (MGP_SPRETEiJ_G0034472) Cdx4 (MGP_SPRETEiJ_G0034471) #16 Nap1l2 (MGP_SPRETEiJ_G0034470) MGP_SPRETEiJ_G0034469 #18 Dmrtc1a (MGP_SPRETEiJ_G0034468) MGP_SPRETEiJ_G0034467 MGP_SPRETEiJ_G0034466 Phka1 (MGP_SPRETEiJ_G0034465) #21 Hdac8 (MGP_SPRETEiJ_G0034464) #22 Cited1 (MGP_SPRETEiJ_G0034463) MGP_SPRETEiJ_G0034462 ##23 Ercc6l (MGP_SPRETEiJ_G0034461) Pin4 (MGP_SPRETEiJ_G0034460) Rtl5 (MGP_SPRETEiJ_G0034459) Nhsl2 (MGP_SPRETEiJ_G0034458) 8030474K03Rik (MGP_SPRETEiJ_G0034457) Cxcr3 (MGP_SPRETEiJ_G0034456) Ogt (MGP_SPRETEiJ_G0034455) Taf1 (MGP_SPRETEiJ_G0034454) Itgb1bp2 (MGP_SPRETEiJ_G0034453) Zmym3 (MGP_SPRETEiJ_G0034451) Gjb1 (MGP_SPRETEiJ_G0034450) Nlgn3 (MGP_SPRETEiJ_G0034449) Med12 (MGP_SPRETEiJ_G0034448) Steppe mouse MODERN SPECIES 3385 ENSMSIG00000008475 #21 Hdac8 (ENSMSIG00000024883) #22 Ryukyu mouse MODERN SPECIES 19 Uprt (MGP_CAROLIEiJ_G0033316) #9 Abcb7 (MGP_CAROLIEiJ_G0033315) #8 Nexmif (MGP_CAROLIEiJ_G0033314) Slc16a2 (MGP_CAROLIEiJ_G0033312) Zcchc13 (MGP_CAROLIEiJ_G0033311) MGP_CAROLIEiJ_G0033310 Tsx (MGP_CAROLIEiJ_G0033309) Chic1 (MGP_CAROLIEiJ_G0033308) Cdx4 (MGP_CAROLIEiJ_G0033307) #16 Nap1l2 (MGP_CAROLIEiJ_G0033306) MGP_CAROLIEiJ_G0033305 #18 Dmrtc1a (MGP_CAROLIEiJ_G0033304) MGP_CAROLIEiJ_G0033303 MGP_CAROLIEiJ_G0033302 Phka1 (MGP_CAROLIEiJ_G0033301) #21 Hdac8 (MGP_CAROLIEiJ_G0033300) #22 Cited1 (MGP_CAROLIEiJ_G0033299) Rps4x (MGP_CAROLIEiJ_G0033298) #23 Ercc6l (MGP_CAROLIEiJ_G0033297) MGP_CAROLIEiJ_G0033296 Rtl5 (MGP_CAROLIEiJ_G0033295) Nhsl2 (MGP_CAROLIEiJ_G0033294) MGP_CAROLIEiJ_G0033293 Cxcr3 (MGP_CAROLIEiJ_G0033292) Ogt (MGP_CAROLIEiJ_G0033291) Taf1 (MGP_CAROLIEiJ_G0033290) Itgb1bp2 (MGP_CAROLIEiJ_G0033289) MGP_CAROLIEiJ_G0033288 Zmym3 (MGP_CAROLIEiJ_G0033287) Gjb1 (MGP_CAROLIEiJ_G0033286) Nlgn3 (MGP_CAROLIEiJ_G0033285) Shrew mouse MODERN SPECIES 23 Uprt (MGP_PahariEiJ_G0031853) #9 Abcb7 (MGP_PahariEiJ_G0031852) #8 Nexmif (MGP_PahariEiJ_G0031851) Rlim (MGP_PahariEiJ_G0031850) Slc16a2 (MGP_PahariEiJ_G0031849) Zcchc13 (MGP_PahariEiJ_G0031848) Tsx (MGP_PahariEiJ_G0031847) Chic1 (MGP_PahariEiJ_G0031846) Cdx4 (MGP_PahariEiJ_G0031845) #16 Nap1l2 (MGP_PahariEiJ_G0031844) Dmrtc1a (MGP_PahariEiJ_G0031843) MGP_PahariEiJ_G0031842 MGP_PahariEiJ_G0031841 MGP_PahariEiJ_G0031840 #20 Phka1 (MGP_PahariEiJ_G0031839) #21 Hdac8 (MGP_PahariEiJ_G0031838) #22 Cited1 (MGP_PahariEiJ_G0031837) Rps4x (MGP_PahariEiJ_G0031836) #23 Ercc6l (MGP_PahariEiJ_G0031835) Pin4 (MGP_PahariEiJ_G0031834) Rtl5 (MGP_PahariEiJ_G0031833) Nhsl2 (MGP_PahariEiJ_G0031832) MGP_PahariEiJ_G0031831 Cxcr3 (MGP_PahariEiJ_G0031830) Ogt (MGP_PahariEiJ_G0031829) MGP_PahariEiJ_G0031828 Itgb1bp2 (MGP_PahariEiJ_G0031827) Nono (MGP_PahariEiJ_G0031826) Zmym3 (MGP_PahariEiJ_G0031825) Gjb1 (MGP_PahariEiJ_G0031824) Nlgn3 (MGP_PahariEiJ_G0031823) Rat MODERN SPECIES 46 Cdx4 (ENSRNOG00000002974) #16 LOC100361671 (ENSRNOG00000003008) RGD1562521 (ENSRNOG00000003009) AABR07039336.2 (ENSRNOG00000003025) AABR07039334.1 (ENSRNOG00000022267) #17 ENSRNOG00000064026 Fam236d (ENSRNOG00000069062) #18 Dmrtc1b (ENSRNOG00000022286) #20 Dmrtc1c1 (ENSRNOG00000068646) LOC120099304 (ENSRNOG00000069736) ENSRNOG00000068588 ENSRNOG00000065493 AABR07039229.2 (ENSRNOG00000048295) LOC679960 (ENSRNOG00000003062) Phka1 (ENSRNOG00000003063) #21 Hdac8 (ENSRNOG00000003122) #22 Cited1 (ENSRNOG00000003189) Rps4x (ENSRNOG00000003201) ##23 Ercc6l (ENSRNOG00000003208) Pin4 (ENSRNOG00000050051) Rtl5 (ENSRNOG00000045779) Nhsl2 (ENSRNOG00000037951) LOC102555994 (ENSRNOG00000060462) Cxhxorf49 (ENSRNOG00000025211) LOC102553785 (ENSRNOG00000025200) Cxcr3 (ENSRNOG00000003305) LOC102548506 (ENSRNOG00000066689) Ogt (ENSRNOG00000003359) Taf1 (ENSRNOG00000002565) Itgb1bp2 (ENSRNOG00000003596) Nono (ENSRNOG00000003689) Upper Galilee mountains blind mole rat MODERN SPECIES 1742 Dmrtc1b (ENSNGAG00000017712) #20 Phka1 (ENSNGAG00000018710) #21 Hdac8 (ENSNGAG00000000558) #22 Cited1 (ENSNGAG00000010654) Rps4x (ENSNGAG00000011593) #23 Ercc6l (ENSNGAG00000021063) ENSNGAG00000000797 Nhsl2 (ENSNGAG00000006702) Rtl5 (ENSNGAG00000014752) Cxcr3 (ENSNGAG00000012996) Ogt (ENSNGAG00000017957) ENSNGAG00000013716 Taf1 (ENSNGAG00000019411) Itgb1bp2 (ENSNGAG00000011479) Nono (ENSNGAG00000010857) Zmym3 (ENSNGAG00000016287) Gjb1 (ENSNGAG00000008737) Nlgn3 (ENSNGAG00000011722) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 80 ENSJJAG00000013578 Chic1 (ENSJJAG00000022346) ENSJJAG00000015455 #16 ENSJJAG00000007003 Nap1l2 (ENSJJAG00000005294) ENSJJAG00000009723 ENSJJAG00000007037 #17 ENSJJAG00000017642 ENSJJAG00000020172 #20 Phka1 (ENSJJAG00000016074) #21 ENSJJAG00000013599 #22 Cited1 (ENSJJAG00000021265) Rps4x (ENSJJAG00000018258) #23 Ercc6l (ENSJJAG00000022875) Pin4 (ENSJJAG00000022110) ENSJJAG00000023103 #16 ENSJJAG00000008830 Cxcr3 (ENSJJAG00000024149) ENSJJAG00000020751 ENSJJAG00000013564 ENSJJAG00000016438 Taf1 (ENSJJAG00000016231) Itgb1bp2 (ENSJJAG00000022114) ENSJJAG00000017151 Zmym3 (ENSJJAG00000017423) Gjb1 (ENSJJAG00000015275) Lesser Egyptian jerboa MODERN SPECIES 71 Zfhx3 (ENSJJAG00000004370) ENSJJAG00000016503 Pmfbp1 (ENSJJAG00000021758) Dhx38 (ENSJJAG00000015149) Txnl4b (ENSJJAG00000014020) Hp (ENSJJAG00000000389) Dhodh (ENSJJAG00000004380) Pkd1l3 (ENSJJAG00000019074) Ist1 (ENSJJAG00000009199) Zfp821 (ENSJJAG00000017771) ENSJJAG00000004633 ENSJJAG00000006838 Ap1g1 (ENSJJAG00000022831) Phlpp2 (ENSJJAG00000018183) Marveld3 (ENSJJAG00000015672) ENSJJAG00000016248 #22 Tat (ENSJJAG00000015605) Chst4 (ENSJJAG00000016154) Zfp612 (ENSJJAG00000014956) Tle7 (ENSJJAG00000020440) Calb2 (ENSJJAG00000019534) ENSJJAG00000013980 ENSJJAG00000010966 Hydin (ENSJJAG00000024000) ENSJJAG00000018488 Vac14 (ENSJJAG00000000270) Mtss2 (ENSJJAG00000015697) Il34 (ENSJJAG00000013016) Sf3b3 (ENSJJAG00000003948) Cog4 (ENSJJAG00000013653) Fcsk (ENSJJAG00000022615) Kangaroo rat MODERN SPECIES 545 ENSDORG00000014278 Phka1 (ENSDORG00000013605) #21 Hdac8 (ENSDORG00000013603) #22 ENSDORG00000028620 Cited1 (ENSDORG00000025773) Rps4x (ENSDORG00000008571) #23 Ercc6l (ENSDORG00000007865) ENSDORG00000024313 Nhsl2 (ENSDORG00000013046) Rtl5 (ENSDORG00000024359) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Sciuridae ANCESTRAL SPECIES 35 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.b ENSGT00390000015252.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Marmotini ANCESTRAL SPECIES 66 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.a.b ENSGT00390000015252.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00390000018613.b.t.a ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 Marmotini_b ANCESTRAL SPECIES 251 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 Squirrel MODERN SPECIES 362 ENSSTOG00000020182 PHKA1 (ENSSTOG00000008458) #21 HDAC8 (ENSSTOG00000008440) #22 CITED1 (ENSSTOG00000008435) ENSSTOG00000028692 ##23 ENSSTOG00000025956 DGAT2L6 (ENSSTOG00000024800) AWAT1 (ENSSTOG00000011451) P2RY4 (ENSSTOG00000015697) Arr3 (ENSSTOG00000011462) PDZD11 (ENSSTOG00000027107) KIF4A (ENSSTOG00000009604) GDPD2 (ENSSTOG00000004472) DLG3 (ENSSTOG00000009640) TEX11 (ENSSTOG00000009656) SLC7A3 (ENSSTOG00000014255) SNX12 (ENSSTOG00000028586) FOXO4 (ENSSTOG00000014587) Arctic ground squirrel MODERN SPECIES 605 ENSUPAG00010015251 #20 PHKA1 (ENSUPAG00010015278) #21 HDAC8 (ENSUPAG00010016655) #22 CITED1 (ENSUPAG00010016670) ENSUPAG00010016687 #23 ERCC6L (ENSUPAG00010016692) PIN4 (ENSUPAG00010016701) NHSL2 (ENSUPAG00010016706) RTL5 (ENSUPAG00010016731) Alpin marmot MODERN SPECIES 74 ENSMMMG00000021453 #20 ENSMMMG00000021472 PHKA1 (ENSMMMG00000021479) #21 HDAC8 (ENSMMMG00000021613) #22 CITED1 (ENSMMMG00000021638) ENSMMMG00000021648 #23 ERCC6L (ENSMMMG00000021653) PIN4 (ENSMMMG00000021657) NHSL2 (ENSMMMG00000021658) RTL5 (ENSMMMG00000021665) ENSMMMG00000021670 ENSMMMG00000021674 ENSMMMG00000021680 CXCR3 (ENSMMMG00000021685) ENSMMMG00000021687 ENSMMMG00000021699 ENSMMMG00000021704 ENSMMMG00000021716 ENSMMMG00000021790 Eurasian red squirrel MODERN SPECIES 156 ABCB7 (ENSSVLG00005014285) #8 NEXMIF (ENSSVLG00005015017) RLIM (ENSSVLG00005015096) SLC16A2 (ENSSVLG00005015129) ZCCHC13 (ENSSVLG00005015163) ENSSVLG00005015182 CDX4 (ENSSVLG00005015316) #16 NAP1L2 (ENSSVLG00005015352) ENSSVLG00005015384 ENSSVLG00005015416 #17 ENSSVLG00005015435 #17 ENSSVLG00005015457 ENSSVLG00005015556 #18 ENSSVLG00005015655 #18 PHKA1 (ENSSVLG00005015757) #21 HDAC8 (ENSSVLG00005016008) #22 CITED1 (ENSSVLG00005016381) ENSSVLG00005016444 #23 PIN4 (ENSSVLG00005016533) ERCC6L (ENSSVLG00005016734) NHSL2 (ENSSVLG00005016754) RTL5 (ENSSVLG00005016947) ENSSVLG00005016970 ENSSVLG00005017206 ENSSVLG00005017271 ENSSVLG00005017338 ENSSVLG00005017662 ENSSVLG00005017896 SERP1 (ENSSVLG00005017996) ENSSVLG00005018019 CXCR3 (ENSSVLG00005018095) Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00390000012030.b.a #27 ENSGT00940000155902 #26 ENSGT00940000160087 #25 ENSGT00940000163182 ENSGT00390000016333 #14 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.a.a ##23 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837.`b ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00390000012178.g.a.a ##28 ENSGT00390000012030.b.a #27 ENSGT00940000155902 #26 ENSGT00940000160087 #25 ENSGT00940000163182 ENSGT00390000016333 #14 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837.`b ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Hystricomorpha_b ANCESTRAL SPECIES 74 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837.`b ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Long-tailed chinchilla MODERN SPECIES 182 PHKA1 (ENSCLAG00000013584) #21 HDAC8 (ENSCLAG00000015755) #22 ENSCLAG00000015363 ENSCLAG00000015266 #23 ENSCLAG00000015218 PIN4 (ENSCLAG00000014880) RTL5 (ENSCLAG00000014510) NHSL2 (ENSCLAG00000011242) CXCR3 (ENSCLAG00000010111) ENSCLAG00000009475 OGT (ENSCLAG00000006474) ENSCLAG00000004940 ITGB1BP2 (ENSCLAG00000003431) NONO (ENSCLAG00000003642) ZMYM3 (ENSCLAG00000003585) GJB1 (ENSCLAG00000004895) NLGN3 (ENSCLAG00000006482) Degu MODERN SPECIES 321 PHKA1 (ENSODEG00000002058) #21 ENSODEG00000002103 HDAC8 (ENSODEG00000002146) #22 ENSODEG00000002191 ENSODEG00000002215 ENSODEG00000002252 RPS4X (ENSODEG00000002268) ##23 ERCC6L (ENSODEG00000002328) ENSODEG00000002336 NHSL2 (ENSODEG00000002360) RTL5 (ENSODEG00000002380) CXCR3 (ENSODEG00000002401) OGT (ENSODEG00000002656) ENSODEG00000002771 ITGB1BP2 (ENSODEG00000002957) ENSODEG00000002994 ENSODEG00000018894 ZMYM3 (ENSODEG00000003059) Guinea pig MODERN SPECIES 26 ENSCPOG00000036844 ##28 MAGT1 (ENSCPOG00000027554) #27 ATRX (ENSCPOG00000007873) #26 FGF16 (ENSCPOG00000007870) #25 MAGEE1 (ENSCPOG00000039465) PBDC1 (ENSCPOG00000006794) #14 ZDHHC15 (ENSCPOG00000006742) #11 UPRT (ENSCPOG00000035232) #9 ABCB7 (ENSCPOG00000010708) #8 NEXMIF (ENSCPOG00000014831) RLIM (ENSCPOG00000031438) SLC16A2 (ENSCPOG00000000465) CHIC1 (ENSCPOG00000035632) ENSCPOG00000009525 #17 PHKA1 (ENSCPOG00000005675) #21 HDAC8 (ENSCPOG00000005671) #22 ENSCPOG00000003816 ENSCPOG00000006337 #23 ERCC6L (ENSCPOG00000011407) PIN4 (ENSCPOG00000031758) NHSL2 (ENSCPOG00000005172) RTL5 (ENSCPOG00000021990) CXCR3 (ENSCPOG00000008446) OGT (ENSCPOG00000014682) ENSCPOG00000035003 ENSCPOG00000039595 ITGB1BP2 (ENSCPOG00000038156) ENSCPOG00000010263 ZMYM3 (ENSCPOG00000010256) NLGN3 (ENSCPOG00000006193) MED12 (ENSCPOG00000000903) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032788 ENSHGLG00000002294 #27 ENSHGLG00000002255 ##28 ATP7A (ENSHGLG00000001804) #29 ENSHGLG00000033714 ENSHGLG00000002230 ENSHGLG00000039396 PGK1 (ENSHGLG00000033746) #30 ENSHGLG00000037603 #31 ENSHGLG00000005962 ENSHGLG00000045054 CYSLTR1 (ENSHGLG00000036741) #32 ENSHGLG00000018958 ENSHGLG00000009342 #21 ENSHGLG00000045192 HDAC8 (ENSHGLG00000015554) #22 CITED1 (ENSHGLG00000013001) ENSHGLG00000009172 ##23 ERCC6L (ENSHGLG00000016594) PIN4 (ENSHGLG00000043461) ENSHGLG00000033358 NHSL2 (ENSHGLG00000004791) RTL5 (ENSHGLG00000043760) ENSHGLG00000047657 ENSHGLG00000050364 ENSHGLG00000037492 ENSHGLG00000006799 ENSHGLG00000034062 ENSHGLG00000008499 ENSHGLG00000050614 ENSHGLG00000042327 Lagomorpha ANCESTRAL SPECIES 40 ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.e.a ENSGT00390000015252.f ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.a.b ENSGT00940000160693 Pika MODERN SPECIES 2015 HDAC8 (ENSOPRG00000002816) #22 Rabbit MODERN SPECIES 1401 ENSOCUG00000029369 FAM199X (ENSOCUG00000014228) SLC25A53 (ENSOCUG00000003541) ENSOCUG00000014764 ENSOCUG00000021083 ENSOCUG00000024276 CHIC1 (ENSOCUG00000009801) CDX4 (ENSOCUG00000013356) #16 ENSOCUG00000027857 NAP1L2 (ENSOCUG00000007414) ENSOCUG00000002565 #17 ENSOCUG00000025806 #20 ENSOCUG00000029608 #20 ENSOCUG00000024072 #20 PHKA1 (ENSOCUG00000024271) #21 HDAC8 (ENSOCUG00000013317) #22 ENSOCUG00000013315 ENSOCUG00000015749 ##23 ERCC6L (ENSOCUG00000008724) PIN4 (ENSOCUG00000008715) RTL5 (ENSOCUG00000008707) NHSL2 (ENSOCUG00000014345) ENSOCUG00000022701 ENSOCUG00000021556 ENSOCUG00000029373 ENSOCUG00000029215 ENSOCUG00000036122 ENSOCUG00000003502 ENSOCUG00000028210 ENSOCUG00000030259 CXCR3 (ENSOCUG00000015578) Tree shrew MODERN SPECIES 5123 PHKA1 (ENSTBEG00000015214) #21 HDAC8 (ENSTBEG00000014893) #22 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157843 #22 Common shrew MODERN SPECIES 3321 HDAC8 (ENSSARG00000008871) #22 Hedgehog MODERN SPECIES 4358 HDAC8 (ENSEEUG00000014963) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Caniformia ANCESTRAL SPECIES 22 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ursidae ANCESTRAL SPECIES 47 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT01030000239825 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ursus ANCESTRAL SPECIES 257 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 Polar bear MODERN SPECIES 345 PHKA1 (ENSUMAG00000004085) #21 HDAC8 (ENSUMAG00000004851) #22 CITED1 (ENSUMAG00000004857) ENSUMAG00000004859 #23 ERCC6L (ENSUMAG00000004863) PIN4 (ENSUMAG00000004865) ENSUMAG00000004886 American black bear MODERN SPECIES 1321 ENSUAMG00000027978 #20 ENSUAMG00000027976 #21 ENSUAMG00000027943 #21 HDAC8 (ENSUAMG00000027942) #22 Giant Panda MODERN SPECIES 2288 ENSAMEG00000026155 ZDHHC15 (ENSAMEG00000017414) #11 ENSAMEG00000023973 UPRT (ENSAMEG00000001806) #9 ABCB7 (ENSAMEG00000001785) #8 NEXMIF (ENSAMEG00000002822) RLIM (ENSAMEG00000002826) SLC16A2 (ENSAMEG00000002832) ENSAMEG00000010405 ZCCHC13 (ENSAMEG00000031042) CHIC1 (ENSAMEG00000016309) CDX4 (ENSAMEG00000002483) #16 NAP1L2 (ENSAMEG00000026435) ENSAMEG00000026180 #18 PHKA1 (ENSAMEG00000005856) #21 HDAC8 (ENSAMEG00000005840) #22 ENSAMEG00000027356 RPS4X (ENSAMEG00000005805) #23 ERCC6L (ENSAMEG00000005804) ENSAMEG00000005801 ENSAMEG00000018760 NHSL2 (ENSAMEG00000018764) ENSAMEG00000025938 CXCR3 (ENSAMEG00000019767) ENSAMEG00000016181 OGT (ENSAMEG00000016129) ENSAMEG00000016102 ENSAMEG00000019575 ITGB1BP2 (ENSAMEG00000016081) NONO (ENSAMEG00000016057) ZMYM3 (ENSAMEG00000016021) Mustelinae ANCESTRAL SPECIES 110 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ferret MODERN SPECIES 402 ENSMPUG00000005379 #20 PHKA1 (ENSMPUG00000005353) #21 HDAC8 (ENSMPUG00000005345) #22 CITED1 (ENSMPUG00000005336) ENSMPUG00000005294 ##23 ERCC6L (ENSMPUG00000005291) PIN4 (ENSMPUG00000005287) NHSL2 (ENSMPUG00000005280) RTL5 (ENSMPUG00000018491) ENSMPUG00000005276 ENSMPUG00000005269 CXCR3 (ENSMPUG00000005263) ENSMPUG00000005256 OGT (ENSMPUG00000005097) ENSMPUG00000005076 ENSMPUG00000005070 ITGB1BP2 (ENSMPUG00000004948) NONO (ENSMPUG00000004937) American mink MODERN SPECIES 463 ENSNVIG00000024463 #20 PHKA1 (ENSNVIG00000024450) #21 HDAC8 (ENSNVIG00000024413) #22 CITED1 (ENSNVIG00000024410) ENSNVIG00000024409 ##23 ERCC6L (ENSNVIG00000024408) ENSNVIG00000024405 RGAG4 (ENSNVIG00000024404) NHSL2 (ENSNVIG00000024397) Canidae ANCESTRAL SPECIES 59 ENSGT00390000016333.r #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.`b ENSGT00940000160693 Canis_lupus ANCESTRAL SPECIES 44 ENSGT00390000016333.r.a #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.eb.a ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.`b ENSGT00940000160693 Dog MODERN SPECIES 144 ABCB7 (ENSCAFG00845030100) #8 ENSCAFG00845030063 NEXMIF (ENSCAFG00845030052) RLIM (ENSCAFG00845030030) SLC16A2 (ENSCAFG00845029973) ENSCAFG00845029963 ZCCHC13 (ENSCAFG00845029957) ENSCAFG00845029889 CHIC1 (ENSCAFG00845029847) CDX4 (ENSCAFG00845029824) #16 ENSCAFG00845029796 #17 ENSCAFG00845029787 ENSCAFG00845029763 #20 ENSCAFG00845029726 #20 ENSCAFG00845023674 #21 HDAC8 (ENSCAFG00845020238) #22 CITED1 (ENSCAFG00845020063) RPS4X (ENSCAFG00845020005) #23 ERCC6L (ENSCAFG00845019976) PIN4 (ENSCAFG00845019941) RTL5 (ENSCAFG00845019888) ENSCAFG00845019851 NHSL2 (ENSCAFG00845019495) ENSCAFG00845019289 ENSCAFG00845019192 CXCR3 (ENSCAFG00845019157) ENSCAFG00845019086 OGT (ENSCAFG00845018937) TAF1 (ENSCAFG00845018115) ENSCAFG00845017943 ITGB1BP2 (ENSCAFG00845017817) Dingo MODERN SPECIES 265 UPRT (ENSCAFG00020024656) #9 ABCB7 (ENSCAFG00020024573) #8 NEXMIF (ENSCAFG00020024551) RLIM (ENSCAFG00020024549) SLC16A2 (ENSCAFG00020024545) ENSCAFG00020024541 ZCCHC13 (ENSCAFG00020024539) ENSCAFG00020024526 CHIC1 (ENSCAFG00020024519) ENSCAFG00020024517 #16 NAP1L2 (ENSCAFG00020024516) ENSCAFG00020024512 #20 ENSCAFG00020024506 #20 ENSCAFG00020024502 #20 PHKA1 (ENSCAFG00020021553) #21 HDAC8 (ENSCAFG00020021326) #22 CITED1 (ENSCAFG00020021325) ENSCAFG00020021317 ##23 ERCC6L (ENSCAFG00020021313) ENSCAFG00020021311 NHSL2 (ENSCAFG00020021306) ENSCAFG00020021301 CXCR3 (ENSCAFG00020021299) OGT (ENSCAFG00020021017) ENSCAFG00020020386 ENSCAFG00020020337 ITGB1BP2 (ENSCAFG00020020322) NONO (ENSCAFG00020020298) ENSCAFG00020020289 ENSCAFG00020020279 GJB1 (ENSCAFG00020020275) Red fox MODERN SPECIES 175 PHKA1 (ENSVVUG00000025468) #21 HDAC8 (ENSVVUG00000025508) #22 CITED1 (ENSVVUG00000025509) RPS4X (ENSVVUG00000025510) ##23 ERCC6L (ENSVVUG00000025512) NHSL2 (ENSVVUG00000025513) RTL5 (ENSVVUG00000025514) ENSVVUG00000000109 CXCR3 (ENSVVUG00000000156) ENSVVUG00000000213 OGT (ENSVVUG00000000263) TAF1 (ENSVVUG00000000579) ENSVVUG00000003285 ITGB1BP2 (ENSVVUG00000003333) NONO (ENSVVUG00000003390) ZMYM3 (ENSVVUG00000003481) GJB1 (ENSVVUG00000005399) Felidae ANCESTRAL SPECIES 12 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Panthera ANCESTRAL SPECIES 47 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.ib ENSGT00950000182963.b.b ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Panthera_a ANCESTRAL SPECIES 56 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029.ib ENSGT00950000182963.b.b ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 lion MODERN SPECIES 88 PRAF2 (ENSPLOG00000017750) GPKOW (ENSPLOG00000017787) GPR173 (ENSPLOG00000017827) TSPYL2 (ENSPLOG00000017848) KANTR (ENSPLOG00000017918) ENSPLOG00000017925 KDM5C (ENSPLOG00000018055) IQSEC2 (ENSPLOG00000018505) ENSPLOG00000018937 SMC1A (ENSPLOG00000018969) RIBC1 (ENSPLOG00000019163) ENSPLOG00000019275 HUWE1 (ENSPLOG00000019431) ENSPLOG00000020226 ENSPLOG00000020264 #21 HDAC8 (ENSPLOG00000020404) #22 CITED1 (ENSPLOG00000020526) ENSPLOG00000020555 #23 ENSPLOG00000020673 ERCC6L (ENSPLOG00000020765) NHSL2 (ENSPLOG00000020815) RTL5 (ENSPLOG00000020907) ENSPLOG00000020915 ENSPLOG00000020959 CXCR3 (ENSPLOG00000021020) ENSPLOG00000021053 ENSPLOG00000021106 ENSPLOG00000021138 ENSPLOG00000021269 ENSPLOG00000021598 ITGB1BP2 (ENSPLOG00000021634) leopard MODERN SPECIES 252 PHKA1 (ENSPPRG00000011456) #21 HDAC8 (ENSPPRG00000011115) #22 CITED1 (ENSPPRG00000010889) ENSPPRG00000010809 #23 Tiger MODERN SPECIES 337 ENSPTIG00000019640 #20 PHKA1 (ENSPTIG00000020625) #21 HDAC8 (ENSPTIG00000018831) #22 ENSPTIG00000017192 RPS4X (ENSPTIG00000016567) ##23 SYT10 (ENSPTIG00000015718) ENSPTIG00000006779 ENSPTIG00000012362 CPNE8 (ENSPTIG00000009449) KIF21A (ENSPTIG00000013639) ABCD2 (ENSPTIG00000012386) C12orf40 (ENSPTIG00000011119) SLC2A13 (ENSPTIG00000008372) LRRK2 (ENSPTIG00000020651) CNTN1 (ENSPTIG00000007852) PDZRN4 (ENSPTIG00000004191) GXYLT1 (ENSPTIG00000019972) ENSPTIG00000019364 Cat MODERN SPECIES 252 ENSFCAG00000025696 ABCB7 (ENSFCAG00000009557) #8 RLIM (ENSFCAG00000003136) SLC16A2 (ENSFCAG00000008075) ZCCHC13 (ENSFCAG00000034344) ENSFCAG00000034997 ENSFCAG00000040388 ENSFCAG00000022629 CHIC1 (ENSFCAG00000025058) ENSFCAG00000039701 #17 ENSFCAG00000043804 #18 ENSFCAG00000036265 #20 ENSFCAG00000045208 #20 ENSFCAG00000050490 PHKA1 (ENSFCAG00000007121) #21 HDAC8 (ENSFCAG00000005065) #22 CITED1 (ENSFCAG00000023693) ERCC6L (ENSFCAG00000012038) PIN4 (ENSFCAG00000012036) RTL5 (ENSFCAG00000024876) ENSFCAG00000037362 NHSL2 (ENSFCAG00000009225) CXCR3 (ENSFCAG00000002186) ENSFCAG00000051813 OGT (ENSFCAG00000002182) ENSFCAG00000014809 ENSFCAG00000021936 ITGB1BP2 (ENSFCAG00000014807) NONO (ENSFCAG00000043511) ZMYM3 (ENSFCAG00000014806) NLGN3 (ENSFCAG00000014804) Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Chiroptera ANCESTRAL SPECIES 62 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Megabat MODERN SPECIES 371 HDAC8 (ENSPVAG00000008286) #22 CITED1 (ENSPVAG00000008285) Microchiroptera ANCESTRAL SPECIES 54 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00920000150764 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Greater horseshoe bat MODERN SPECIES ABCB7 (ENSRFEG00010000009) #8 NEXMIF (ENSRFEG00010000012) RLIM (ENSRFEG00010000013) SLC16A2 (ENSRFEG00010000014) ENSRFEG00010000015 ENSRFEG00010000018 CHIC1 (ENSRFEG00010000019) CDX4 (ENSRFEG00010000020) #16 ENSRFEG00010000021 ENSRFEG00010000022 NAP1L2 (ENSRFEG00010000023) ENSRFEG00010000024 #17 ENSRFEG00010000025 #20 ENSRFEG00010000026 #20 PHKA1 (ENSRFEG00010000027) #21 HDAC8 (ENSRFEG00010000028) #22 ENSRFEG00010000029 ENSRFEG00010000030 #23 PIN4 (ENSRFEG00010000031) ERCC6L (ENSRFEG00010000032) NHSL2 (ENSRFEG00010000033) RTL5 (ENSRFEG00010000034) ENSRFEG00010000035 ENSRFEG00010000036 CXCR3 (ENSRFEG00010000037) ENSRFEG00010000039 ENSRFEG00010000041 ENSRFEG00010000042 ENSRFEG00010000043 ITGB1BP2 (ENSRFEG00010000045) ENSRFEG00010000046 Microbat DUPLICATION Microbat MODERN SPECIES 1115 SLC4A11 (ENSMLUG00000000362) ITPA (ENSMLUG00000000358) DDRGK1 (ENSMLUG00000000352) LZTS3 (ENSMLUG00000000347) FASTKD5 (ENSMLUG00000000343) UBOX5 (ENSMLUG00000025497) PTPRA (ENSMLUG00000029093) VPS16 (ENSMLUG00000016651) PCED1A (ENSMLUG00000028662) TMEM239 (ENSMLUG00000002712) CPXM1 (ENSMLUG00000002715) EBF4 (ENSMLUG00000023832) IDH3B (ENSMLUG00000008193) NOP56 (ENSMLUG00000027085) TMC2 (ENSMLUG00000023589) ENSMLUG00000027258 #22 SNRPB (ENSMLUG00000016951) TGM6 (ENSMLUG00000016945) ENSMLUG00000030507 Microbat MODERN SPECIES 941 ZC4H2 (ENSMLUG00000008305) ENSMLUG00000027582 ZC3H12B (ENSMLUG00000013635) LAS1L (ENSMLUG00000013640) ENSMLUG00000030463 ENSMLUG00000005009 MSN (ENSMLUG00000008116) VSIG4 (ENSMLUG00000003881) HEPH (ENSMLUG00000000638) ENSMLUG00000030523 ZCCHC13 (ENSMLUG00000002814) CHIC1 (ENSMLUG00000025620) ENSMLUG00000027332 NAP1L2 (ENSMLUG00000001703) PHKA1 (ENSMLUG00000005413) #21 ENSMLUG00000005406 #22 CITED1 (ENSMLUG00000005401) ENSMLUG00000006172 RPS4X (ENSMLUG00000011685) ##23 ERCC6L (ENSMLUG00000011670) PIN4 (ENSMLUG00000012073) NHSL2 (ENSMLUG00000012253) RTL5 (ENSMLUG00000012246) ENSMLUG00000027587 CXCR3 (ENSMLUG00000008266) OGT (ENSMLUG00000008213) ENSMLUG00000023133 ENSMLUG00000009092 ITGB1BP2 (ENSMLUG00000022665) NONO (ENSMLUG00000002489) ENSMLUG00000026033 Equus ANCESTRAL SPECIES 27 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252.y.b ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Donkey MODERN SPECIES 36 ABCB7 (ENSEASG00005004704) #8 NEXMIF (ENSEASG00005012051) RLIM (ENSEASG00005020336) SLC16A2 (ENSEASG00005025806) ZCCHC13 (ENSEASG00005025614) ENSEASG00005026432 ENSEASG00005034688 CHIC1 (ENSEASG00005034271) ENSEASG00005010490 #16 NAP1L2 (ENSEASG00005032059) ENSEASG00005034662 #17 ENSEASG00005010399 #17 ENSEASG00005030915 #20 ENSEASG00005030313 #18 PHKA1 (ENSEASG00005022796) #21 HDAC8 (ENSEASG00005023051) #22 CITED1 (ENSEASG00005010784) ENSEASG00005032986 #23 ERCC6L (ENSEASG00005007025) PIN4 (ENSEASG00005007027) RTL5 (ENSEASG00005028557) NHSL2 (ENSEASG00005031208) ENSEASG00005035382 ENSEASG00005037481 ENSEASG00005020354 ENSEASG00005035444 OGT (ENSEASG00005020382) ENSEASG00005007044 ENSEASG00005022163 ENSEASG00005025769 ITGB1BP2 (ENSEASG00005036980) Horse MODERN SPECIES 480 UPRT (ENSECAG00000015489) #9 ABCB7 (ENSECAG00000000643) #8 NEXMIF (ENSECAG00000023442) RLIM (ENSECAG00000020600) SLC16A2 (ENSECAG00000019968) CHIC1 (ENSECAG00000016317) ENSECAG00000046425 CDX4 (ENSECAG00000037034) #16 ENSECAG00000044847 NAP1L2 (ENSECAG00000009018) ENSECAG00000002620 #17 ENSECAG00000006837 #20 ENSECAG00000035808 #20 ENSECAG00000033249 #18 PHKA1 (ENSECAG00000023809) #21 HDAC8 (ENSECAG00000018525) #22 CITED1 (ENSECAG00000056091) RPS4X (ENSECAG00000010852) ##23 ERCC6L (ENSECAG00000002513) PIN4 (ENSECAG00000000364) RTL5 (ENSECAG00000023894) NHSL2 (ENSECAG00000002472) ENSECAG00000032482 ENSECAG00000039787 ENSECAG00000040049 ENSECAG00000055137 CXCR3 (ENSECAG00000023587) ENSECAG00000023391 OGT (ENSECAG00000023721) ENSECAG00000058792 ENSECAG00000006365 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Suina ANCESTRAL SPECIES 7 ENSGT00940000160087 #25 ENSGT00940000163487 #13 ENSGT00390000016333 #14 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311.rb.b #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Chacoan peccary MODERN SPECIES 22 ZDHHC15 (ENSCWAG00000002160) #11 UPRT (ENSCWAG00000002203) #9 ABCB7 (ENSCWAG00000002270) #8 NEXMIF (ENSCWAG00000002739) RLIM (ENSCWAG00000002752) SLC16A2 (ENSCWAG00000002764) ZCCHC13 (ENSCWAG00000002770) CHIC1 (ENSCWAG00000002797) CDX4 (ENSCWAG00000002816) #16 NAP1L2 (ENSCWAG00000002830) ENSCWAG00000002841 ENSCWAG00000002857 #17 ENSCWAG00000002863 #17 ENSCWAG00000002873 #18 PHKA1 (ENSCWAG00000002918) #21 HDAC8 (ENSCWAG00000003037) #22 CITED1 (ENSCWAG00000003068) ENSCWAG00000003080 #23 PIN4 (ENSCWAG00000003103) ERCC6L (ENSCWAG00000003127) NHSL2 (ENSCWAG00000003145) RTL5 (ENSCWAG00000003169) ENSCWAG00000003178 CXCR3 (ENSCWAG00000003190) OGT (ENSCWAG00000003205) ENSCWAG00000003266 ENSCWAG00000003383 ITGB1BP2 (ENSCWAG00000003394) NONO (ENSCWAG00000003409) ZMYM3 (ENSCWAG00000003425) GJB1 (ENSCWAG00000003454) Pig MODERN SPECIES 300 ENSSSCG00000045470 SLC16A2 (ENSSSCG00000029458) ZCCHC13 (ENSSSCG00000035737) CHIC1 (ENSSSCG00000012416) CDX4 (ENSSSCG00000021225) #16 NAP1L2 (ENSSSCG00000012415) ENSSSCG00000031849 ENSSSCG00000032167 #17 ENSSSCG00000053499 #17 ENSSSCG00000060899 #18 ENSSSCG00000040223 #20 ENSSSCG00000031328 #20 ENSSSCG00000055158 #18 ENSSSCG00000063130 #18 PHKA1 (ENSSSCG00000012411) #21 HDAC8 (ENSSSCG00000021200) #22 CITED1 (ENSSSCG00000012409) ENSSSCG00000034717 RPS4X (ENSSSCG00000012405) #23 ENSSSCG00000012406 ERCC6L (ENSSSCG00000021834) PIN4 (ENSSSCG00000023312) RTL5 (ENSSSCG00000020876) NHSL2 (ENSSSCG00000012408) ENSSSCG00000053529 ENSSSCG00000052088 ENSSSCG00000057131 CXCR3 (ENSSSCG00000012402) OGT (ENSSSCG00000012403) ENSSSCG00000027115 ENSSSCG00000012392 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Camelidae ANCESTRAL SPECIES 43 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000173095 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Arabian camel MODERN SPECIES 204 ZDHHC15 (ENSCDRG00005020979) #11 UPRT (ENSCDRG00005020970) #9 ABCB7 (ENSCDRG00005020791) #8 NEXMIF (ENSCDRG00005020765) RLIM (ENSCDRG00005020761) SLC16A2 (ENSCDRG00005020750) ZCCHC13 (ENSCDRG00005020743) ENSCDRG00005020728 CHIC1 (ENSCDRG00005020723) CDX4 (ENSCDRG00005020715) #16 NAP1L2 (ENSCDRG00005020710) ENSCDRG00005020706 ENSCDRG00005020694 #17 ENSCDRG00005020647 #20 PHKA1 (ENSCDRG00005020606) #21 HDAC8 (ENSCDRG00005010238) #22 CITED1 (ENSCDRG00005009756) ENSCDRG00005009701 #23 ERCC6L (ENSCDRG00005009654) PIN4 (ENSCDRG00005009624) RTL5 (ENSCDRG00005009605) NHSL2 (ENSCDRG00005009450) ENSCDRG00005009260 ENSCDRG00005009238 ENSCDRG00005009119 CXCR3 (ENSCDRG00005009075) OGT (ENSCDRG00005017831) ENSCDRG00005017785 ENSCDRG00005017651 ENSCDRG00005017566 ITGB1BP2 (ENSCDRG00005017480) Alpaca MODERN SPECIES 3279 PHKA1 (ENSVPAG00000010956) #21 HDAC8 (ENSVPAG00000010955) #22 CITED1 (ENSVPAG00000010953) RPS4X (ENSVPAG00000010952) ##23 ERCC6L (ENSVPAG00000010950) PIN4 (ENSVPAG00000010947) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Cetacea ANCESTRAL SPECIES 19 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Odontoceti ANCESTRAL SPECIES 19 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Odontoceti_a ANCESTRAL SPECIES 28 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.a.a ##23 ENSGT00390000005569.x.a.b.b.a.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Dolphin MODERN SPECIES 931 PHKA1 (ENSTTRG00000003470) #21 HDAC8 (ENSTTRG00000003469) #22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.a.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT00390000015252.q ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00990000210226.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 Vaquita MODERN SPECIES 34 RLIM (ENSPSNG00000021171) SLC16A2 (ENSPSNG00000021147) ENSPSNG00000021128 ZCCHC13 (ENSPSNG00000021100) CHIC1 (ENSPSNG00000021038) CDX4 (ENSPSNG00000021015) #16 NAP1L2 (ENSPSNG00000020996) ENSPSNG00000020976 ENSPSNG00000020961 #17 ENSPSNG00000020950 #17 ENSPSNG00000020922 #20 ENSPSNG00000020883 #20 ENSPSNG00000020842 #20 PHKA1 (ENSPSNG00000020622) #21 ENSPSNG00000020488 HDAC8 (ENSPSNG00000020257) #22 CITED1 (ENSPSNG00000020135) ENSPSNG00000020120 ENSPSNG00000020028 #23 ERCC6L (ENSPSNG00000019984) PIN4 (ENSPSNG00000019855) RTL5 (ENSPSNG00000019829) NHSL2 (ENSPSNG00000019714) ENSPSNG00000019652 ENSPSNG00000019407 ENSPSNG00000019357 ENSPSNG00000019317 CXCR3 (ENSPSNG00000019284) ENSPSNG00000019258 ENSPSNG00000019210 ENSPSNG00000019173 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00960000186788.c ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B ENSGT00390000005569.x.a.b.b.a.b.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191 ENSGT00950000182963.b.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b.o ENSGT00990000210226.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Beluga whale MODERN SPECIES 108 ENSDLEG00000011989 #20 ENSDLEG00000012015 #20 PHKA1 (ENSDLEG00000012043) #21 HDAC8 (ENSDLEG00000012186) #22 ENSDLEG00000012218 CITED1 (ENSDLEG00000012236) ENSDLEG00000012246 RPS4X (ENSDLEG00000012257) #23 ERCC6L (ENSDLEG00000012271) PIN4 (ENSDLEG00000012278) NHSL2 (ENSDLEG00000012303) RTL5 (ENSDLEG00000012336) ENSDLEG00000012348 Narwhal MODERN SPECIES 309 UPRT (ENSMMNG00015011908) #9 ABCB7 (ENSMMNG00015011807) #8 ENSMMNG00015011764 NEXMIF (ENSMMNG00015011752) RLIM (ENSMMNG00015011741) SLC16A2 (ENSMMNG00015011721) ENSMMNG00015011664 CHIC1 (ENSMMNG00015011634) CDX4 (ENSMMNG00015011607) #16 NAP1L2 (ENSMMNG00015011594) ENSMMNG00015011584 ENSMMNG00015011562 #20 ENSMMNG00015011531 #18 PHKA1 (ENSMMNG00015010994) #21 ENSMMNG00015010743 HDAC8 (ENSMMNG00015010620) #22 CITED1 (ENSMMNG00015010507) ENSMMNG00015010498 RPS4X (ENSMMNG00015010476) ##23 ERCC6L (ENSMMNG00015010438) PIN4 (ENSMMNG00015010421) RTL5 (ENSMMNG00015010410) NHSL2 (ENSMMNG00015010379) CXCR3 (ENSMMNG00015010353) ENSMMNG00015010315 ENSMMNG00015010298 ENSMMNG00015010247 ENSMMNG00015010213 ITGB1BP2 (ENSMMNG00015010179) NONO (ENSMMNG00015010158) ZMYM3 (ENSMMNG00015010107) Sperm whale MODERN SPECIES 13 ABCB7 (ENSPCTG00005014159) #8 ENSPCTG00005013967 NEXMIF (ENSPCTG00005013886) RLIM (ENSPCTG00005013848) SLC16A2 (ENSPCTG00005013786) ENSPCTG00005013715 ZCCHC13 (ENSPCTG00005013657) ENSPCTG00005013621 ENSPCTG00005013600 CHIC1 (ENSPCTG00005013523) CDX4 (ENSPCTG00005013461) #16 NAP1L2 (ENSPCTG00005013426) ENSPCTG00005013403 #17 PHKA1 (ENSPCTG00005012900) #21 ENSPCTG00005012840 HDAC8 (ENSPCTG00005012589) #22 CITED1 (ENSPCTG00005012508) RPS4X (ENSPCTG00005012433) #23 ERCC6L (ENSPCTG00005012377) PIN4 (ENSPCTG00005012267) ENSPCTG00005012239 NHSL2 (ENSPCTG00005012113) CXCR3 (ENSPCTG00005012075) ENSPCTG00005012056 ENSPCTG00005012425 TAF1 (ENSPCTG00005011907) ENSPCTG00005011800 ITGB1BP2 (ENSPCTG00005011575) NONO (ENSPCTG00005011492) ZMYM3 (ENSPCTG00005011284) GJB1 (ENSPCTG00005011243) Blue whale MODERN SPECIES 40 UPRT (ENSBMSG00010020790) #9 ABCB7 (ENSBMSG00010020772) #8 ENSBMSG00010020759 NEXMIF (ENSBMSG00010020750) RLIM (ENSBMSG00010020736) ENSBMSG00010020729 SLC16A2 (ENSBMSG00010020722) ENSBMSG00010020715 ZCCHC13 (ENSBMSG00010020707) CHIC1 (ENSBMSG00010020642) CDX4 (ENSBMSG00010020620) #16 ENSBMSG00010020608 #17 ENSBMSG00010020600 #18 ENSBMSG00010020587 PHKA1 (ENSBMSG00010020455) #21 HDAC8 (ENSBMSG00010020145) #22 CITED1 (ENSBMSG00010020081) ENSBMSG00010020072 #23 ERCC6L (ENSBMSG00010020056) PIN4 (ENSBMSG00010020035) RTL5 (ENSBMSG00010020020) NHSL2 (ENSBMSG00010019980) CXCR3 (ENSBMSG00010019965) ENSBMSG00010019935 ENSBMSG00010019866 ENSBMSG00010019843 ITGB1BP2 (ENSBMSG00010019802) NONO (ENSBMSG00010019773) ZMYM3 (ENSBMSG00010019664) GJB1 (ENSBMSG00010019635) ENSBMSG00010019629 Pecora ANCESTRAL SPECIES 27 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00410000029400 #18 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.a ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Yarkand deer MODERN SPECIES 1323 ZDHHC15 (ENSCHYG00000011470) #11 UPRT (ENSCHYG00000011786) #9 ABCB7 (ENSCHYG00000012079) #8 ENSCHYG00000013033 NEXMIF (ENSCHYG00000013048) RLIM (ENSCHYG00000013107) SLC16A2 (ENSCHYG00000013135) ENSCHYG00000013216 ENSCHYG00000013357 CHIC1 (ENSCHYG00000013382) CDX4 (ENSCHYG00000013503) #16 NAP1L2 (ENSCHYG00000013551) ENSCHYG00000013611 #17 PHKA1 (ENSCHYG00000014051) #21 ENSCHYG00000021251 HDAC8 (ENSCHYG00000021302) #22 CITED1 (ENSCHYG00000021899) ENSCHYG00000022005 #23 ENSCHYG00000022048 ERCC6L (ENSCHYG00000022233) NHSL2 (ENSCHYG00000022300) RTL5 (ENSCHYG00000022577) ENSCHYG00000022594 CXCR3 (ENSCHYG00000022631) ENSCHYG00000022668 OGT (ENSCHYG00000022764) ENSCHYG00000022934 ENSCHYG00000023878 ITGB1BP2 (ENSCHYG00000023933) ENSCHYG00000024097 NONO (ENSCHYG00000024105) Percora_a ANCESTRAL SPECIES 22 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00410000029400 #18 ENSGT00940000163063 #20 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.a ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Siberian musk deer MODERN SPECIES 9 UPRT (ENSMMSG00000000982) #9 ABCB7 (ENSMMSG00000001025) #8 ENSMMSG00000001187 NEXMIF (ENSMMSG00000001198) RLIM (ENSMMSG00000001223) SLC16A2 (ENSMMSG00000001236) ZCCHC13 (ENSMMSG00000001254) ENSMMSG00000001290 CHIC1 (ENSMMSG00000001301) CDX4 (ENSMMSG00000001319) #16 ENSMMSG00000001340 #20 ENSMMSG00000001364 #20 ENSMMSG00000001383 #18 ENSMMSG00000001396 #17 PHKA1 (ENSMMSG00000001414) #21 HDAC8 (ENSMMSG00000001581) #22 CITED1 (ENSMMSG00000001777) ENSMMSG00000001800 #23 ENSMMSG00000001833 ERCC6L (ENSMMSG00000001868) NHSL2 (ENSMMSG00000001888) RTL5 (ENSMMSG00000001915) Bovidae ANCESTRAL SPECIES 23 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163063 #20 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.a ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Bovinae ANCESTRAL SPECIES 38 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000160311.`c #17 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.a ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Bos ANCESTRAL SPECIES 30 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000160311.`c #17 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Bos_a ANCESTRAL SPECIES 19 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191.a ENSGT00940000163191.b.a ENSGT00390000015252.s.a.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Domestic yak MODERN SPECIES 69 ZDHHC15 (ENSBGRG00000023027) #11 ENSBGRG00000023226 UPRT (ENSBGRG00000023239) #9 ABCB7 (ENSBGRG00000023373) #8 ENSBGRG00000023925 NEXMIF (ENSBGRG00000023961) RLIM (ENSBGRG00000023991) SLC16A2 (ENSBGRG00000024018) ZCCHC13 (ENSBGRG00000024056) ENSBGRG00000024150 ENSBGRG00000024158 CHIC1 (ENSBGRG00000024180) CDX4 (ENSBGRG00000024264) #16 ENSBGRG00000024296 #20 PHKA1 (ENSBGRG00000024454) #21 HDAC8 (ENSBGRG00000025035) #22 CITED1 (ENSBGRG00000025098) ENSBGRG00000025116 ##23 PIN4 (ENSBGRG00000025136) ERCC6L (ENSBGRG00000025193) NHSL2 (ENSBGRG00000025208) ENSBGRG00000025269 ENSBGRG00000025287 ENSBGRG00000025302 ENSBGRG00000025312 CXCR3 (ENSBGRG00000025320) OGT (ENSBGRG00000025338) ENSBGRG00000025461 ENSBGRG00000025796 ITGB1BP2 (ENSBGRG00000025809) NONO (ENSBGRG00000025854) Wild yak MODERN SPECIES 1111 PHKA1 (ENSBMUG00000007877) #21 ENSBMUG00000007798 HDAC8 (ENSBMUG00000007782) #22 SEMA3D (ENSBMUG00000007745) SEMA3A (ENSBMUG00000007717) Bos_b ANCESTRAL SPECIES 12 ENSGT00940000160087 #25 ENSGT00940000163243 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000160311.`c #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00940000163191.a ENSGT00950000182963.b.b ENSGT00940000163191.b.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Cow MODERN SPECIES 177 ABCB7 (ENSBTAG00000011028) #8 NEXMIF (ENSBTAG00000000300) RLIM (ENSBTAG00000015630) ENSBTAG00000051929 SLC16A2 (ENSBTAG00000002585) ZCCHC13 (ENSBTAG00000032003) CHIC1 (ENSBTAG00000020826) CDX4 (ENSBTAG00000001726) #16 MGC140080 (ENSBTAG00000050059) #20 ENSBTAG00000053104 #20 ENSBTAG00000052491 #17 ENSBTAG00000051474 ENSBTAG00000050902 #17 ENSBTAG00000051767 #21 PHKA1 (ENSBTAG00000015848) #21 HDAC8 (ENSBTAG00000046092) #22 ENSBTAG00000052692 CITED1 (ENSBTAG00000045925) RPS4X (ENSBTAG00000018800) #23 ERCC6L (ENSBTAG00000005607) PIN4 (ENSBTAG00000047376) NHSL2 (ENSBTAG00000045565) RTL5 (ENSBTAG00000047545) ENSBTAG00000049525 CXCR3 (ENSBTAG00000014798) OGT (ENSBTAG00000000902) ENSBTAG00000006878 ITGB1BP2 (ENSBTAG00000012163) NONO (ENSBTAG00000012152) ZMYM3 (ENSBTAG00000008492) GJB1 (ENSBTAG00000020512) Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005025206 ABCB7 (ENSBIXG00005004343) #8 NEXMIF (ENSBIXG00005025570) RLIM (ENSBIXG00005025624) SLC16A2 (ENSBIXG00005025654) ENSBIXG00005004383 ENSBIXG00005025707 ENSBIXG00005025786 ENSBIXG00005025818 CHIC1 (ENSBIXG00005025937) CDX4 (ENSBIXG00005025966) #16 ENSBIXG00005025997 #20 ENSBIXG00005004436 #17 ENSBIXG00005026017 #17 PHKA1 (ENSBIXG00005006185) #21 HDAC8 (ENSBIXG00005026224) #22 CITED1 (ENSBIXG00005026354) ENSBIXG00005026386 #23 ERCC6L (ENSBIXG00005026427) PIN4 (ENSBIXG00005026438) RTL5 (ENSBIXG00005026448) NHSL2 (ENSBIXG00005007203) ENSBIXG00005026633 ENSBIXG00005026656 ENSBIXG00005026670 ENSBIXG00005004560 ENSBIXG00005026702 ENSBIXG00005004565 ##23 CXCR3 (ENSBIXG00005026720) OGT (ENSBIXG00005026815) ENSBIXG00005027194 Caprinae ANCESTRAL SPECIES 50 ENSGT00940000163372 ENSGT00940000163063 #20 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.a.b.a #23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191.a ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020016579 ENSOARG00020016548 GPR174 (ENSOARG00020016533) ITM2A (ENSOARG00020016499) TBX22 (ENSOARG00020016413) TENT5D (ENSOARG00020016386) BRWD3 (ENSOARG00020015617) HMGN5 (ENSOARG00020015488) ENSOARG00020025731 GLS (ENSOARG00020025702) STAT1 (ENSOARG00020025634) STAT4 (ENSOARG00020025579) ENSOARG00020025556 #17 PHKA1 (ENSOARG00020025431) #21 ENSOARG00020025389 HDAC8 (ENSOARG00020025320) #22 CITED1 (ENSOARG00020025298) ENSOARG00020025291 #23 ERCC6L (ENSOARG00020025281) PIN4 (ENSOARG00020025228) RTL5 (ENSOARG00020025206) NHSL2 (ENSOARG00020025157) CXCR3 (ENSOARG00020025135) OGT (ENSOARG00020025079) ENSOARG00020024804 ENSOARG00020024762 ENSOARG00020024748 ITGB1BP2 (ENSOARG00020024686) NONO (ENSOARG00020024655) ZMYM3 (ENSOARG00020024506) GJB1 (ENSOARG00020024479) Goat DUPLICATION Goat MODERN SPECIES 29 ENSCHIG00000007957 ENSCHIG00000020141 OGT (ENSCHIG00000001994) ENSCHIG00000003495 CXCR3 (ENSCHIG00000014964) ENSCHIG00000020497 ENSCHIG00000015330 FGF16 (ENSCHIG00000011577) #25 RTL5 (ENSCHIG00000009403) NHSL2 (ENSCHIG00000018552) PIN4 (ENSCHIG00000014397) ERCC6L (ENSCHIG00000009967) ENSCHIG00000023292 ##23 CITED1 (ENSCHIG00000019258) PHKA1 (ENSCHIG00000021783) #21 ENSCHIG00000019337 #22 NAP1L2 (ENSCHIG00000016151) ENSCHIG00000020667 #20 ENSCHIG00000006283 #17 CHIC1 (ENSCHIG00000016513) ENSCHIG00000001275 ENSCHIG00000021839 ZCCHC13 (ENSCHIG00000019132) SLC16A2 (ENSCHIG00000015992) RLIM (ENSCHIG00000019610) NEXMIF (ENSCHIG00000014641) ABCB7 (ENSCHIG00000005807) #8 ZDHHC15 (ENSCHIG00000012700) #11 MAGEE2 (ENSCHIG00000007901) #13 HDX (ENSCHIG00000008366) ENSCHIG00000012493 Goat MODERN SPECIES 113 ENSCHIG00000000457 #22 Atlantogenata ANCESTRAL SPECIES 61 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Xenarthra ANCESTRAL SPECIES ENSGT00940000157843 #22 Sloth MODERN SPECIES 3857 ENSCHOG00000013561 #22 Afrotheria ANCESTRAL SPECIES 71 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.k ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Afrotheria_a ANCESTRAL SPECIES 70 ENSGT00940000160087 #25 ENSGT00390000016333 #14 ENSGT00940000163487 #13 ENSGT00940000158214 #11 ENSGT01020000230412.D #9 ENSGT00940000156281 #8 ENSGT00940000159746 ENSGT00940000155753.k ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 #16 ENSGT00940000163372 ENSGT00940000160311 #17 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.x.b ##23 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000163191 ENSGT00390000015252 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Elephant MODERN SPECIES 251 ENSLAFG00000030374 PBDC1 (ENSLAFG00000026665) #14 MAGEE2 (ENSLAFG00000000647) #13 ZDHHC15 (ENSLAFG00000008568) #11 UPRT (ENSLAFG00000004685) #9 ABCB7 (ENSLAFG00000008784) #8 NEXMIF (ENSLAFG00000015430) RLIM (ENSLAFG00000004774) SLC16A2 (ENSLAFG00000004618) ZCCHC13 (ENSLAFG00000029278) CHIC1 (ENSLAFG00000018579) CDX4 (ENSLAFG00000016806) #16 NAP1L2 (ENSLAFG00000026154) ENSLAFG00000023096 #17 PHKA1 (ENSLAFG00000006928) #21 HDAC8 (ENSLAFG00000008515) #22 CITED1 (ENSLAFG00000017528) RPS4X (ENSLAFG00000002654) ##23 ERCC6L (ENSLAFG00000014985) PIN4 (ENSLAFG00000018261) ENSLAFG00000000637 ENSLAFG00000030373 RTL5 (ENSLAFG00000028394) ENSLAFG00000032112 ENSLAFG00000027894 CXCR3 (ENSLAFG00000029972) OGT (ENSLAFG00000008655) ENSLAFG00000001269 ITGB1BP2 (ENSLAFG00000000808) NONO (ENSLAFG00000013422) ZMYM3 (ENSLAFG00000022555) Hyrax MODERN SPECIES 3523 ENSPCAG00000007859 #21 ENSPCAG00000007794 #22 Tenrec MODERN SPECIES 4220 HDAC8 (ENSETEG00000019513) #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000158106 ENSGT00390000006601 ENSGT00390000011709 ENSGT00950000183174.B.b ENSGT00940000156877 ENSGT00940000164962 ENSGT00990000203769 ENSGT00390000013956 ENSGT00940000157039.b ENSGT00390000013700 ENSGT00480000042679.b.b ENSGT00940000155219 ENSGT00940000155454 ENSGT00940000156894 ENSGT00900000143582 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT00940000156743 ENSGT00940000155079.b ENSGT00940000153064.b.b.a.b ENSGT00940000160425 ENSGT00390000001134.a.a ENSGT00390000005954 ENSGT00390000013790 ENSGT00530000063106.C ENSGT00390000015293 ENSGT00940000156711 ENSGT00940000158108 ENSGT00940000158486 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00390000006601 ENSGT00390000011709 ENSGT00950000183174.B.b ENSGT00940000156877 ENSGT00940000164962.a ENSGT00990000203769 ENSGT00390000013956 ENSGT00940000157039.b ENSGT00390000013700 ENSGT00480000042679.b.b ENSGT00940000155219 ENSGT00940000155454 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00900000143582 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT00940000156743 ENSGT00940000155079.b ENSGT00940000160425 ENSGT00390000001134.a.a ENSGT00390000005954 ENSGT00390000013790 ENSGT00530000063106.C ENSGT00390000015293 ENSGT00940000156711 ENSGT00940000158108 ENSGT00940000158486 ENSGT00960000186835 Diprotodontia ANCESTRAL SPECIES 116 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 Diprotodontia_a ANCESTRAL SPECIES 108 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT01030000234641.b.a.b.a.a.l ENSGT00940000156743 Common wonbat MODERN SPECIES 1170 ENSVURG00010013219 ENSVURG00010013223 PCDH17 (ENSVURG00010013234) ENSVURG00010013294 ENSVURG00010014148 #22 ENSVURG00010014157 TDRD3 (ENSVURG00010014176) ENSVURG00010014222 PCDH20 (ENSVURG00010014226) koala MODERN SPECIES 114 DIAPH3 (ENSPCIG00000003745) ENSPCIG00000005837 #22 ENSPCIG00000031515 ENSPCIG00000011476 ENSPCIG00000011482 PCDH20 (ENSPCIG00000011484) ENSPCIG00000008133 NUP35 (ENSPCIG00000015482) DUSP19 (ENSPCIG00000015497) NCKAP1 (ENSPCIG00000019118) FRZB (ENSPCIG00000012990) DNAJC10 (ENSPCIG00000023771) PDE1A (ENSPCIG00000014791) ENSPCIG00000014824 PPP1R1C (ENSPCIG00000014830) ITPRID2 (ENSPCIG00000014835) NEUROD1 (ENSPCIG00000014845) Tasmanian devil MODERN SPECIES 2 ENSSHAG00000023806 WBP4 (ENSSHAG00000018027) ENSSHAG00000017887 ENSSHAG00000027194 ENSSHAG00000021232 PCDH8 (ENSSHAG00000024494) OLFM4 (ENSSHAG00000017198) ENSSHAG00000030587 ENSSHAG00000011884 ENSSHAG00000031334 PCDH17 (ENSSHAG00000030397) ENSSHAG00000029234 ENSSHAG00000015066 ENSSHAG00000020824 DIAPH3 (ENSSHAG00000014221) ENSSHAG00000029149 #22 TDRD3 (ENSSHAG00000011994) ENSSHAG00000021559 ENSSHAG00000026280 PCDH20 (ENSSHAG00000003246) ENSSHAG00000024025 PCDH9 (ENSSHAG00000010087) ENSSHAG00000007080 KLHL1 (ENSSHAG00000009888) DACH1 (ENSSHAG00000003702) MZT1 (ENSSHAG00000027921) BORA (ENSSHAG00000015051) DIS3 (ENSSHAG00000015153) PIBF1 (ENSSHAG00000015284) KLF5 (ENSSHAG00000022922) KLF12 (ENSSHAG00000020744) Opossum MODERN SPECIES 6 WBP4 (ENSMODG00000014761) ELF1 (ENSMODG00000014756) SUGT1 (ENSMODG00000014748) CNMD (ENSMODG00000014743) PCDH8 (ENSMODG00000014739) OLFM4 (ENSMODG00000047878) ENSMODG00000014727 ENSMODG00000024964 ENSMODG00000046257 ENSMODG00000044832 ENSMODG00000028702 ENSMODG00000048827 ENSMODG00000044149 ENSMODG00000006412 PCDH17 (ENSMODG00000006409) HDAC8 (ENSMODG00000024915) #22 ENSMODG00000047947 DIAPH3 (ENSMODG00000006363) ENSMODG00000006329 ENSMODG00000024918 PCDH20 (ENSMODG00000006279) ENSMODG00000029389 ENSMODG00000006268 ENSMODG00000043469 ENSMODG00000029077 ENSMODG00000038503 ENSMODG00000024965 ENSMODG00000041893 SPRY2 (ENSMODG00000001592) ENSMODG00000001586 RBM26 (ENSMODG00000001574) Platypus MODERN SPECIES 17 ENSOANG00000014489 ENSOANG00000016041 ENSOANG00000009600 ENSOANG00000001989 ENSOANG00000041690 ENSOANG00000022007 CLCN5 (ENSOANG00000001908) ENSOANG00000049977 AKAP4 (ENSOANG00000013980) ccnb3 (ENSOANG00000013985) ENSOANG00000013986 ENSOANG00000044660 ENSOANG00000046076 ENSOANG00000036938 PHKA1 (ENSOANG00000014323) #21 ENSOANG00000002951 #22 CITED1 (ENSOANG00000002950) ENSOANG00000002949 ##23 NHSL2 (ENSOANG00000045462) ENSOANG00000014709 ERCC6L (ENSOANG00000014708) TSC22D3 (ENSOANG00000037542) ENSOANG00000049514 MID2 (ENSOANG00000014706) OCRL (ENSOANG00000012031) ENSOANG00000042145 XPNPEP2 (ENSOANG00000013312) SASH3 (ENSOANG00000014543) ZDHHC9 (ENSOANG00000007237) ENSOANG00000013483 BCORL1 (ENSOANG00000012035) Sauria ANCESTRAL SPECIES 35 ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 Lepidosauria ANCESTRAL SPECIES 121 ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000156837 ENSGT00510000047029 tuatara DUPLICATION tuatara MODERN SPECIES 44 PHKA1 (ENSSPUG00000015336) #21 ENSSPUG00000015325 #22 ENSSPUG00000015317 #22 tuatara MODERN SPECIES 44 PHKA1 (ENSSPUG00000015336) #21 ENSSPUG00000015325 #22 ENSSPUG00000015317 #22 Episquamata ANCESTRAL SPECIES 14 ENSGT00940000155085.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Toxicofera ANCESTRAL SPECIES 17 ENSGT00940000163331 ENSGT00940000155242 ENSGT00940000155085.a.a ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Elapidae ANCESTRAL SPECIES 14 ENSGT00940000155242 ENSGT00940000155085.a.a ENSGT00940000155085.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Indian cobra MODERN SPECIES 13 ENSNNAG00000012177 ENSNNAG00000012200 ENSNNAG00000012259 ENSNNAG00000012278 ENSNNAG00000012316 ENSNNAG00000012329 KLF8 (ENSNNAG00000012347) ENSNNAG00000012368 CLCN5 (ENSNNAG00000012416) ENSNNAG00000012607 ENSNNAG00000012638 ENSNNAG00000012716 SHROOM4 (ENSNNAG00000013045) BMP15 (ENSNNAG00000013080) PHKA1 (ENSNNAG00000013170) #21 HDAC8 (ENSNNAG00000013867) #22 RPS4X (ENSNNAG00000014136) #23 ENSNNAG00000014178 ENSNNAG00000014194 TSC22D3 (ENSNNAG00000014207) ENSNNAG00000014224 PLP1 (ENSNNAG00000014331) RAB9B (ENSNNAG00000014341) ENSNNAG00000014348 SLC25A53 (ENSNNAG00000014381) ENSNNAG00000014393 ENSNNAG00000014418 DNAAF6 (ENSNNAG00000014433) NUP62 (ENSNNAG00000014445) RBM41 (ENSNNAG00000014468) CLDN2 (ENSNNAG00000014480) Elapidae_a ANCESTRAL SPECIES 46 ENSGT00940000155242 ENSGT00940000155085.a.a ENSGT00940000155085.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Acanthophiinae ANCESTRAL SPECIES 45 ENSGT00940000155242 ENSGT00940000155085.a.a ENSGT00940000155085.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Mainland tiger snake MODERN SPECIES 222 ENSNSUG00000014187 ENSNSUG00000014317 ENSNSUG00000014318 ENSNSUG00000014322 ENSNSUG00000014334 ENSNSUG00000014335 KLF8 (ENSNSUG00000014336) ENSNSUG00000014337 CLCN5 (ENSNSUG00000014339) ENSNSUG00000014340 ENSNSUG00000014341 ENSNSUG00000014342 SHROOM4 (ENSNSUG00000014343) BMP15 (ENSNSUG00000014344) PHKA1 (ENSNSUG00000014345) #21 HDAC8 (ENSNSUG00000018232) #22 RPS4X (ENSNSUG00000018233) #23 ENSNSUG00000018234 ENSNSUG00000018235 TSC22D3 (ENSNSUG00000018236) ENSNSUG00000018237 PLP1 (ENSNSUG00000018238) RAB9B (ENSNSUG00000018239) ENSNSUG00000018240 SLC25A53 (ENSNSUG00000018241) ENSNSUG00000018242 ENSNSUG00000018243 DNAAF6 (ENSNSUG00000018244) NUP62 (ENSNSUG00000018245) ENSNSUG00000018291 CLDN2 (ENSNSUG00000018292) Eastern brown snake MODERN SPECIES 86 ENSPTXG00000007953 ENSPTXG00000007951 ENSPTXG00000007946 ENSPTXG00000007943 ENSPTXG00000007939 KLF8 (ENSPTXG00000007937) ENSPTXG00000007935 CLCN5 (ENSPTXG00000007932) ENSPTXG00000007930 ENSPTXG00000007929 ENSPTXG00000007813 ENSPTXG00000007802 ENSPTXG00000007801 BMP15 (ENSPTXG00000007799) ENSPTXG00000007797 #21 HDAC8 (ENSPTXG00000007792) #22 RPS4X (ENSPTXG00000007787) #23 ENSPTXG00000007784 TSC22D3 (ENSPTXG00000007781) ENSPTXG00000007778 PLP1 (ENSPTXG00000007776) RAB9B (ENSPTXG00000007771) ENSPTXG00000007769 SLC25A53 (ENSPTXG00000007768) ENSPTXG00000007766 ENSPTXG00000007764 DNAAF6 (ENSPTXG00000011062) NUP62 (ENSPTXG00000011058) ENSPTXG00000011056 CLDN2 (ENSPTXG00000011055) PRRG3 (ENSPTXG00000011038) Blue-lipped sea krait MODERN SPECIES 264 ENSLLTG00000018139 ENSLLTG00000018138 ENSLLTG00000018135 KLF8 (ENSLLTG00000018134) ENSLLTG00000018132 CLCN5 (ENSLLTG00000018130) ENSLLTG00000018128 ENSLLTG00000018126 ENSLLTG00000018124 SHROOM4 (ENSLLTG00000018122) BMP15 (ENSLLTG00000018121) PHKA1 (ENSLLTG00000008750) #21 HDAC8 (ENSLLTG00000007980) #22 RPS4X (ENSLLTG00000007951) #23 ENSLLTG00000007891 TSC22D3 (ENSLLTG00000007863) ENSLLTG00000007832 PLP1 (ENSLLTG00000007809) RAB9B (ENSLLTG00000007800) ENSLLTG00000007780 SLC25A53 (ENSLLTG00000007755) ENSLLTG00000007733 FRMPD3 (ENSLLTG00000007630) DNAAF6 (ENSLLTG00000007593) ENSLLTG00000007545 RBM41 (ENSLLTG00000007478) CLDN2 (ENSLLTG00000007467) PRRG3 (ENSLLTG00000007453) Lizard MODERN SPECIES 1291 PHKA1 (ENSACAG00000014694) #21 ENSACAG00000014647 #22 RPS4X (ENSACAG00000014601) #23 ENSACAG00000014594 ENSACAG00000026711 ENSACAG00000014362 ENSACAG00000014323 RAB9B (ENSACAG00000014318) ENSACAG00000022310 ENSACAG00000014314 ENSACAG00000044163 ENSACAG00000044864 ENSACAG00000014208 Laterata ANCESTRAL SPECIES 48 ENSGT00940000163331 ENSGT00940000155242.h ENSGT00940000155085.b ENSGT00940000153941.a.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479.g.b ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 Argentine black and white tegu MODERN SPECIES 120 ENSSMRG00000002757 OGT (ENSSMRG00000002756) ENSSMRG00000002752 GLOD5 (ENSSMRG00000002751) ENSSMRG00000002749 ENSSMRG00000002747 KLF8 (ENSSMRG00000002746) ENSSMRG00000002716 CLCN5 (ENSSMRG00000002704) ENSSMRG00000002702 ENSSMRG00000002698 ENSSMRG00000002142 SHROOM4 (ENSSMRG00000002127) BMP15 (ENSSMRG00000002122) PHKA1 (ENSSMRG00000002074) #21 HDAC8 (ENSSMRG00000002072) #22 RPS4X (ENSSMRG00000002071) #23 ENSSMRG00000002068 TSC22D3 (ENSSMRG00000002067) ENSSMRG00000002066 Common wall lizard MODERN SPECIES 1 ATP6V1F (ENSPMRG00000015729) ATP6V1FNB (ENSPMRG00000015731) ENSPMRG00000015732 ENSPMRG00000015750 ENSPMRG00000014031 ENSPMRG00000014046 ENSPMRG00000014060 ENSPMRG00000014072 ENSPMRG00000014078 ENSPMRG00000014085 ENSPMRG00000014092 ENSPMRG00000014098 ENSPMRG00000014111 TYMP (ENSPMRG00000014137) ENSPMRG00000014150 HDAC8 (ENSPMRG00000014158) #22 ENSPMRG00000014166 ENSPMRG00000014182 ENSPMRG00000014188 ENSPMRG00000014193 ENSPMRG00000014200 ENSPMRG00000014215 ENSPMRG00000014221 ENSPMRG00000014227 ENSPMRG00000014248 ENSPMRG00000014260 ENSPMRG00000014276 ENSPMRG00000014283 ENSPMRG00000014298 ENSPMRG00000014315 ENSPMRG00000014324 Archelosauria ANCESTRAL SPECIES 37 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b ENSGT00510000047029 ENSGT00940000156837 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 ENSGT00940000153737.a Cryptodira ANCESTRAL SPECIES 64 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00940000165959 ENSGT00940000156656 Testudinoidea ANCESTRAL SPECIES 9 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b ENSGT00510000047029 ENSGT00940000156837 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Emydidae ANCESTRAL SPECIES 80 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 Three-toed box turtle MODERN SPECIES 78 ENSTMTG00000003850 FUNDC2 (ENSTMTG00000003876) CMC4 (ENSTMTG00000003892) ENSTMTG00000003907 BRCC3 (ENSTMTG00000003923) ENSTMTG00000003944 FAAH2 (ENSTMTG00000003959) CLIC2 (ENSTMTG00000003992) ENSTMTG00000004008 ENSTMTG00000004036 ENSTMTG00000004074 SHROOM4 (ENSTMTG00000004094) BMP15 (ENSTMTG00000004142) ENSTMTG00000004162 PHKA1 (ENSTMTG00000004183) #21 HDAC8 (ENSTMTG00000004377) #22 CITED1 (ENSTMTG00000004441) ENSTMTG00000004457 #23 ENSTMTG00000004473 ENSTMTG00000004493 ENSTMTG00000004531 TSC22D3 (ENSTMTG00000004545) ENSTMTG00000004563 ENSTMTG00000004574 painted turtle MODERN SPECIES 952 ENSCPBG00000010502 ENSCPBG00000010507 ENSCPBG00000010515 CLCN5 (ENSCPBG00000010518) ENSCPBG00000010523 ENSCPBG00000010530 ENSCPBG00000010568 SHROOM4 (ENSCPBG00000010610) BMP15 (ENSCPBG00000010614) ENSCPBG00000010620 PHKA1 (ENSCPBG00000010626) #21 HDAC8 (ENSCPBG00000010643) #22 CITED1 (ENSCPBG00000010654) Testudinidae ANCESTRAL SPECIES 7 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b ENSGT00510000047029.lb ENSGT00940000156837 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Goode s thornscrub tortoise MODERN SPECIES 23 CMC4 (ENSGEVG00005010035) ENSGEVG00005010057 BRCC3 (ENSGEVG00005010091) ENSGEVG00005010120 ENSGEVG00005010159 FAAH2 (ENSGEVG00005010178) CLIC2 (ENSGEVG00005010209) ENSGEVG00005010237 ENSGEVG00005010279 ENSGEVG00005010309 ENSGEVG00005010412 SHROOM4 (ENSGEVG00005010602) BMP15 (ENSGEVG00005010648) ENSGEVG00005010703 PHKA1 (ENSGEVG00005010749) #21 HDAC8 (ENSGEVG00005010859) #22 CITED1 (ENSGEVG00005010918) ENSGEVG00005010955 #23 ENSGEVG00005011001 ENSGEVG00005011050 TSC22D3 (ENSGEVG00005011470) MID2 (ENSGEVG00005011510) ENSGEVG00005011656 ENSGEVG00005011663 ENSGEVG00005011711 NHSL2 (ENSGEVG00005011745) PIN4 (ENSGEVG00005011770) ERCC6L (ENSGEVG00005011791) OCRL (ENSGEVG00005011844) APLN (ENSGEVG00005011967) XPNPEP2 (ENSGEVG00005012005) Abingdon island giant tortoise MODERN SPECIES 1614 SHROOM4 (ENSCABG00000005517) BMP15 (ENSCABG00000005520) ENSCABG00000005522 PHKA1 (ENSCABG00000005671) #21 HDAC8 (ENSCABG00000013704) #22 CITED1 (ENSCABG00000013744) ENSCABG00000013746 #23 ENSCABG00000013748 ENSCABG00000013751 TSC22D3 (ENSCABG00000013754) Chinese turtle MODERN SPECIES 1190 ENSPSIG00000005007 PHKA1 (ENSPSIG00000004468) #21 HDAC8 (ENSPSIG00000004293) #22 ENSPSIG00000001106 ENSPSIG00000004146 #23 ENSPSIG00000013897 TSC22D3 (ENSPSIG00000013883) Archosauria ANCESTRAL SPECIES 15 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000167446 ENSGT00940000154442 ENSGT00940000160693 ENSGT01050000244864.B.a ENSGT01030000234513.B.a ENSGT01030000235750 ENSGT00940000159580 ENSGT00440000037505.b Aves ANCESTRAL SPECIES 53 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 Neognathae ANCESTRAL SPECIES 43 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 Neognathae_b ANCESTRAL SPECIES ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 Golden eagle MODERN SPECIES 13 OCRL (ENSACCG00020007957) ERCC6L (ENSACCG00020007987) PIN4 (ENSACCG00020007996) NHSL2 (ENSACCG00020008013) MID2 (ENSACCG00020008030) TSC22D3 (ENSACCG00020008038) FAAH2 (ENSACCG00020008047) CLIC2 (ENSACCG00020008060) ENSACCG00020008070 ENSACCG00020008081 ENSACCG00020008150 ENSACCG00020008249 BMP15 (ENSACCG00020008263) ENSACCG00020008278 PHKA1 (ENSACCG00020008294) #21 HDAC8 (ENSACCG00020008308) #22 CITED1 (ENSACCG00020008318) ENSACCG00020008328 #23 Kakapo MODERN SPECIES 1 OCRL (ENSSHBG00005015422) ERCC6L (ENSSHBG00005015409) PIN4 (ENSSHBG00005015400) NHSL2 (ENSSHBG00005015388) MID2 (ENSSHBG00005015376) TSC22D3 (ENSSHBG00005015369) FAAH2 (ENSSHBG00005015351) ENSSHBG00005015340 CLIC2 (ENSSHBG00005015331) ENSSHBG00005015319 ENSSHBG00005015309 ENSSHBG00005015296 SHROOM4 (ENSSHBG00005015278) BMP15 (ENSSHBG00005015271) ENSSHBG00005015268 HDAC8 (ENSSHBG00005015260) #22 ENSSHBG00005015247 MBLAC1 (ENSSHBG00005015236) ENSSHBG00005015221 ENSSHBG00005015212 ENSSHBG00005015203 ENSSHBG00005015155 ENSSHBG00005015124 ENSSHBG00005015118 SHF (ENSSHBG00005015109) ENSSHBG00005015091 ALPK3 (ENSSHBG00005015050) ENSSHBG00005015021 ZNF592 (ENSSHBG00005015004) SEC11A (ENSSHBG00005014989) NMB (ENSSHBG00005014981) Passeriformes ANCESTRAL SPECIES 30 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00870000136493.c ENSGT00520000055620.B.f Great tit MODERN SPECIES 24 ENSPMJG00000012321 OCRL (ENSPMJG00000012320) ENSPMJG00000012319 ERCC6L (ENSPMJG00000012318) NHSL2 (ENSPMJG00000012317) ENSPMJG00000012315 TSC22D3 (ENSPMJG00000012313) FAAH2 (ENSPMJG00000012311) CLIC2 (ENSPMJG00000012309) ENSPMJG00000012308 ENSPMJG00000012307 ENSPMJG00000012306 SHROOM4 (ENSPMJG00000012305) BMP15 (ENSPMJG00000012304) PHKA1 (ENSPMJG00000012303) #21 HDAC8 (ENSPMJG00000012298) #22 ENSPMJG00000012297 #23 ENSPMJG00000012296 ENSPMJG00000012295 ENSPMJG00000012294 GLOD5 (ENSPMJG00000012288) ENSPMJG00000012287 ENSPMJG00000012285 ENSPMJG00000012284 ENSPMJG00000012283 CETN1 (ENSPMJG00000012282) NSDHL (ENSPMJG00000012281) ENSPMJG00000012278 ENSPMJG00000012277 VAMP7 (ENSPMJG00000012276) POLR1D (ENSPMJG00000012275) Passeriformes_d DUPLICATION Passeriformes_d ANCESTRAL SPECIES ENSGT00940000157843.k #22 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000157843.k #22 Passeroidea ANCESTRAL SPECIES ENSGT00940000157843.k #22 Common canary MODERN SPECIES 13 ENSSCAG00000015946 OCRL (ENSSCAG00000015941) ERCC6L (ENSSCAG00000015935) ENSSCAG00000015934 NHSL2 (ENSSCAG00000015933) MID2 (ENSSCAG00000015931) TSC22D3 (ENSSCAG00000015927) FAAH2 (ENSSCAG00000015920) CLIC2 (ENSSCAG00000015914) ENSSCAG00000015904 ENSSCAG00000015900 ENSSCAG00000015879 SHROOM4 (ENSSCAG00000015867) BMP15 (ENSSCAG00000015864) PHKA1 (ENSSCAG00000015256) #21 ENSSCAG00000014924 #22 ENSSCAG00000014919 #22 RPS4X (ENSSCAG00000014912) #23 ENSSCAG00000014907 ENSSCAG00000014895 Passeriformes_d ANCESTRAL SPECIES 31 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #23 ENSGT00870000136493.c ENSGT00520000055620.B.f Passeriformes_g ANCESTRAL SPECIES 23 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #23 ENSGT00870000136493.c ENSGT00520000055620.B.f Passeroidea ANCESTRAL SPECIES 25 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #23 ENSGT00870000136493.c ENSGT00520000055620.B.f Common canary MODERN SPECIES 13 OCRL (ENSSCAG00000015941) ERCC6L (ENSSCAG00000015935) ENSSCAG00000015934 NHSL2 (ENSSCAG00000015933) MID2 (ENSSCAG00000015931) TSC22D3 (ENSSCAG00000015927) FAAH2 (ENSSCAG00000015920) CLIC2 (ENSSCAG00000015914) ENSSCAG00000015904 ENSSCAG00000015900 ENSSCAG00000015879 SHROOM4 (ENSSCAG00000015867) BMP15 (ENSSCAG00000015864) PHKA1 (ENSSCAG00000015256) #21 ENSSCAG00000014924 #22 ENSSCAG00000014919 #22 RPS4X (ENSSCAG00000014912) #23 ENSSCAG00000014907 ENSSCAG00000014895 Zebra finch MODERN SPECIES 26 ENSTGUG00000021007 OCRL (ENSTGUG00000004995) ERCC6L (ENSTGUG00000004992) PIN4 (ENSTGUG00000004983) NHSL2 (ENSTGUG00000020851) MID2 (ENSTGUG00000004946) TSC22D3 (ENSTGUG00000019242) FAAH2 (ENSTGUG00000004933) CLIC2 (ENSTGUG00000004925) ENSTGUG00000004918 ENSTGUG00000004916 ENSTGUG00000004878 SHROOM4 (ENSTGUG00000020543) BMP15 (ENSTGUG00000004869) PHKA1 (ENSTGUG00000004827) #21 HDAC8 (ENSTGUG00000004801) #22 RPS4X (ENSTGUG00000022503) #23 ENSTGUG00000019393 ENSTGUG00000022518 ENSTGUG00000004773 SLITRK4 (ENSTGUG00000004770) SLITRK2 (ENSTGUG00000004763) TSSK2 (ENSTGUG00000004761) FMR1 (ENSTGUG00000004735) AFF2 (ENSTGUG00000004690) IDS (ENSTGUG00000004678) ENSTGUG00000004664 TMEM185A (ENSTGUG00000004667) MAMLD1 (ENSTGUG00000004663) MTM1 (ENSTGUG00000004636) MTMR1 (ENSTGUG00000004586) Medium ground finch MODERN SPECIES 207 ZDHHC9 (ENSGFOG00000009657) SASH3 (ENSGFOG00000009662) XPNPEP2 (ENSGFOG00000009669) OCRL (ENSGFOG00000009692) ERCC6L (ENSGFOG00000009722) PIN4 (ENSGFOG00000009727) NHSL2 (ENSGFOG00000009734) TSC22D3 (ENSGFOG00000009772) FAAH2 (ENSGFOG00000009781) CLIC2 (ENSGFOG00000009791) ENSGFOG00000009797 ENSGFOG00000009859 ENSGFOG00000010505 BMP15 (ENSGFOG00000010506) PHKA1 (ENSGFOG00000010596) #21 HDAC8 (ENSGFOG00000012576) #22 RPS4X (ENSGFOG00000012590) #23 RPGRIP1L (ENSGFOG00000012601) Flycatcher MODERN SPECIES 23 OCRL (ENSFALG00000011786) ERCC6L (ENSFALG00000011797) ENSFALG00000026660 NHSL2 (ENSFALG00000028263) ENSFALG00000011839 ENSFALG00000026828 ENSFALG00000024783 ENSFALG00000027784 CLIC2 (ENSFALG00000028179) ENSFALG00000011899 ENSFALG00000011907 ENSFALG00000011916 ENSFALG00000027491 BMP15 (ENSFALG00000011933) PHKA1 (ENSFALG00000011955) #21 ENSFALG00000011987 #22 RPS4X (ENSFALG00000023514) #23 Galloanserae ANCESTRAL SPECIES 43 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 Anatidae ANCESTRAL SPECIES 78 ENSGT00390000014020 ENSGT00940000157996.a ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 Duck MODERN SPECIES 1 ZDHHC9 (ENSAPLG00000013343) SASH3 (ENSAPLG00000019773) ENSAPLG00000022336 ENSAPLG00000014140 ENSAPLG00000020162 NHSL2 (ENSAPLG00000022721) MID2 (ENSAPLG00000015609) FAAH2 (ENSAPLG00000016066) CLIC2 (ENSAPLG00000000963) ENSAPLG00000001287 ENSAPLG00000002443 ENSAPLG00000002561 ENSAPLG00000016924 BMP15 (ENSAPLG00000017130) PHKA1 (ENSAPLG00000005017) #21 HDAC8 (ENSAPLG00000006408) #22 ENSAPLG00000025640 ENSAPLG00000010479 GABRA3 (ENSAPLG00000010123) ENSAPLG00000009273 CNGA2 (ENSAPLG00000009170) ENSAPLG00000022903 PRRG3 (ENSAPLG00000009043) MORC4 (ENSAPLG00000008858) NUP62 (ENSAPLG00000008575) DNAAF6 (ENSAPLG00000008516) FRMPD3 (ENSAPLG00000022824) ENSAPLG00000017528 RAB9B (ENSAPLG00000001949) PLP1 (ENSAPLG00000010958) ENSAPLG00000010996 Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00530000063786.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161604 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000158789 ENSGT00390000008751.b ENSGT00940000161656 ENSGT00940000158469.g.a ENSGT00940000154661 ENSGT00940000164465 Japanese quail MODERN SPECIES 22 SASH3 (ENSCJPG00005004900) APLN (ENSCJPG00005004921) OCRL (ENSCJPG00005004923) ERCC6L (ENSCJPG00005005464) PIN4 (ENSCJPG00005005465) NHSL2 (ENSCJPG00005005468) MID2 (ENSCJPG00005005485) TSC22D3 (ENSCJPG00005005573) ENSCJPG00005005574 FAAH2 (ENSCJPG00005005575) CLIC2 (ENSCJPG00005005592) ENSCJPG00005005596 ENSCJPG00005005742 BMP15 (ENSCJPG00005005745) PHKA1 (ENSCJPG00005005760) #21 HDAC8 (ENSCJPG00005010432) #22 RBM41 (ENSCJPG00005010433) ENSCJPG00005010434 #23 NUP62 (ENSCJPG00005010435) DNAAF6 (ENSCJPG00005010512) FRMPD3 (ENSCJPG00005010513) ENSCJPG00005010514 ENSCJPG00005010515 RAB9B (ENSCJPG00005010516) PLP1 (ENSCJPG00005010517) ENSCJPG00005010521 GLA (ENSCJPG00005010522) RPL36AL (ENSCJPG00005010523) BTK (ENSCJPG00005010524) TIMM8A (ENSCJPG00005010658) ENSCJPG00005010659 Phasianidae_b ANCESTRAL SPECIES 24 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 ENSGT00510000047029 ENSGT00950000182963.b.b ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00530000063786.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161604 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000158789 ENSGT00390000008751.b ENSGT00940000161656 ENSGT00940000158469.g.a ENSGT00940000154661 ENSGT00940000164465 Turkey MODERN SPECIES 29 ENSMGAG00000009418 ENSMGAG00000017712 GLA (ENSMGAG00000009492) ENSMGAG00000009484 ENSMGAG00000009503 RAB9B (ENSMGAG00000009570) PLP1 (ENSMGAG00000009552) ENSMGAG00000018934 ENSMGAG00000009574 ENSMGAG00000020195 ENSMGAG00000009609 ENSMGAG00000018624 ENSMGAG00000009625 ENSMGAG00000009671 #23 ENSMGAG00000009663 ENSMGAG00000009681 #22 ENSMGAG00000009697 #21 ENSMGAG00000009744 ENSMGAG00000021329 ENSMGAG00000017155 ENSMGAG00000009789 ENSMGAG00000009749 ENSMGAG00000002151 ENSMGAG00000002159 ENSMGAG00000016690 ENSMGAG00000016264 ENSMGAG00000017429 ENSMGAG00000018542 ENSMGAG00000020199 ENSMGAG00000002096 ENSMGAG00000002094 Chicken MODERN SPECIES 33 PIN4 (ENSGALG00010015158) NHSL2 (ENSGALG00010015171) MID2 (ENSGALG00010015498) ENSGALG00010014578 TSC22D4 (ENSGALG00010014603) ENSGALG00010015108 ENSGALG00010015110 CLIC2 (ENSGALG00010015145) EVA1CL (ENSGALG00010015298) CCNB3 (ENSGALG00010015390) DGKK (ENSGALG00010015422) ENSGALG00010016712 ENSGALG00010019975 BMP15 (ENSGALG00010016722) PHKA1 (ENSGALG00010016292) #21 HDAC8 (ENSGALG00010016310) #22 RPS4Y1 (ENSGALG00010016315) #23 RBM41 (ENSGALG00010016319) NUP62 (ENSGALG00010016362) DNAAF6 (ENSGALG00010016372) FRMPD3 (ENSGALG00010016377) ENSGALG00010016400 TMSB15B (ENSGALG00010016412) RAB9B (ENSGALG00010016473) PLP1 (ENSGALG00010016496) ENSGALG00010016173 GLA (ENSGALG00010015927) RPL36AL (ENSGALG00010015936) BTK (ENSGALG00010015975) TIMM8A (ENSGALG00010015985) ENSGALG00010015994 African ostrich MODERN SPECIES 922 PHKA1 (ENSSCUG00000016466) #21 HDAC8 (ENSSCUG00000016461) #22 ENSSCUG00000016456 #23 Anura ANCESTRAL SPECIES 151 ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00510000047029 ENSGT00940000156837 ENSGT00940000156656 ENSGT00950000183118.A.c.b.r #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00940000165703 ENSGT00390000002414 ENSGT01030000234582.f.a.a ENSGT01030000234621.C.a.a.a ENSGT00940000157424 ENSGT00390000012961 ENSGT00940000161147 ENSGT00940000156576 ENSGT00950000183144.A ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a Frog MODERN SPECIES 8 slc25a53 (ENSXETG00000018131) prps1 (ENSXETG00000014636) ENSXETG00000018128 ENSXETG00000044864 cldn2 (ENSXETG00000048063) ENSXETG00000044815 XB994497 [provisional] (ENSXETG00000047006) ENSXETG00000045370 ENSXETG00000049475 ENSXETG00000048029 ENSXETG00000046837 ENSXETG00000041787 XB940377 (ENSXETG00000045479) phka1 (ENSXETG00000018114) #21 XB995740 [provisional] (ENSXETG00000048770) hdac8 (ENSXETG00000020527) #22 CITED1 (ENSXETG00000046523) ENSXETG00000046383 ENSXETG00000035602 #21 shroom4 (ENSXETG00000030777) zbtb6 (ENSXETG00000020530) zbtb26 (ENSXETG00000042339) krt18.2 (ENSXETG00000020532) ndufa8 (ENSXETG00000016324) morn5 (ENSXETG00000016326) lhx6 (ENSXETG00000016325) rbm18 (ENSXETG00000038367) ENSXETG00000035538 mrrf (ENSXETG00000016327) ENSXETG00000045081 ENSXETG00000046420 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000025702 ENSLLEG00000025725 ENSLLEG00000025776 ENSLLEG00000026005 ENSLLEG00000026290 ENSLLEG00000026325 ERCC6L (ENSLLEG00000026399) TSC22D3 (ENSLLEG00000026429) ENSLLEG00000026490 NHSL2 (ENSLLEG00000026557) ENSLLEG00000026840 ENSLLEG00000026870 #23 ENSLLEG00000027116 PHKA1 (ENSLLEG00000027164) #21 ENSLLEG00000027452 HDAC8 (ENSLLEG00000027518) #22 ENSLLEG00000008198 ENSLLEG00000008229 ENSLLEG00000008248 ENSLLEG00000008256 ENSLLEG00000008269 ENSLLEG00000008293 ENSLLEG00000008329 ENSLLEG00000008488 ENSLLEG00000008579 ENSLLEG00000008594 P2RY4 (ENSLLEG00000008660) ENSLLEG00000008713 ENSLLEG00000009060 ARR3 (ENSLLEG00000009089) ENSLLEG00000009200 Coelacanth MODERN SPECIES 364 ENSLACG00000017436 kctd12b (ENSLACG00000017410) klf5l (ENSLACG00000016686) KLF8 (ENSLACG00000016296) ENSLACG00000016135 rraga (ENSLACG00000016067) ENSLACG00000016011 ENSLACG00000014968 ccnb3 (ENSLACG00000014828) tnfsf10l (ENSLACG00000014541) CLCN5 (ENSLACG00000014222) SHROOM4 (ENSLACG00000013906) bmp15 (ENSLACG00000013361) CFAP70 (ENSLACG00000012971) PHKA1 (ENSLACG00000011782) #21 HDAC8 (ENSLACG00000011351) #22 CITED1 (ENSLACG00000011228) TSC22D3 (ENSLACG00000010897) ENSLACG00000009945 ENSLACG00000006907 ENSLACG00000003006 #23 ERCC6L (ENSLACG00000002634) PIN4 (ENSLACG00000002000) nek12 (ENSLACG00000001667) Actinopterygii ANCESTRAL SPECIES 323 ENSGT00940000164406 ENSGT00940000160459 ENSGT01070000253816.a.a.a ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b Neopterygii ANCESTRAL SPECIES 147 ENSGT00940000164406 ENSGT00940000160459 ENSGT01070000253816.a.a.a ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883 ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00530000063000.a.b.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000012182 ENSGT00940000157452 Osteoglossocephalai ANCESTRAL SPECIES 124 ENSGT01050000244937.a.b.a.b ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00530000063000.a.b.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000012182 ENSGT00730000111366 Clupeocephala ANCESTRAL SPECIES 50 ENSGT00530000063000.a.b.a ENSGT00940000160883.a ENSGT00990000210151 ENSGT01060000248564.b.a.b.b.b.b ENSGT00950000182962.a.b.b ENSGT01050000244937.a.b.a.b ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000157637.b ENSGT00390000017407 ENSGT00390000016398.a ENSGT00390000016398.b ENSGT00910000144784.a Otomorpha ANCESTRAL SPECIES 351 ENSGT00940000159479.p.a ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388.a.a Otophysi ANCESTRAL SPECIES 295 ENSGT00940000159479.p.a ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388.a.b Characiphysae ANCESTRAL SPECIES 45 ENSGT00940000159844 ENSGT00940000159372 ENSGT00940000160289 ENSGT00940000161071 ENSGT00940000166370 ENSGT00730000112287 ENSGT00940000174877 ENSGT00950000182903.a.b.i ENSGT00940000158535 ENSGT01100000263613 ENSGT00940000163927.a.a ENSGT00940000153491.b.b.b ENSGT00940000166316 ENSGT01030000234567.B.a.b.a.a ENSGT00390000014072.B ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388.a.b Characiphysae_b ANCESTRAL SPECIES 154 ENSGT00940000159844 ENSGT00940000159372 ENSGT00940000160289 ENSGT00940000161071 ENSGT00940000166370 ENSGT00730000112287 ENSGT00940000174877 ENSGT00950000182903.a.b.i ENSGT00940000158535 ENSGT01100000263613 ENSGT00940000163927.a.a ENSGT00940000153491.b.b.b ENSGT00940000166316 ENSGT01030000234567.B.a.b.a.a ENSGT00390000014072.B ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066 ENSGT00940000158388.a.b Characoidei ANCESTRAL SPECIES 9 ENSGT00940000159844 ENSGT00940000159372 ENSGT00940000160289 ENSGT00940000155511.m ENSGT00940000166370 ENSGT00730000112287 ENSGT00940000174877 ENSGT00950000182903.a.b.i ENSGT00940000158535 ENSGT01100000263613 ENSGT00940000163927.a.a ENSGT00940000153491.b.b.b ENSGT00940000166316 ENSGT01030000234567.B.a.b.a.a ENSGT00390000014072.B ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000158388.a.b ENSGT01050000244843.d.i.a.a.b ENSGT00940000159592 ENSGT00390000005656 ENSGT00940000155980.A ENSGT00510000047418 ENSGT00390000017284.a.b.c Mexicana tetra MODERN SPECIES 7 ENSAMXG00000012978 SLC16A13 (ENSAMXG00000013028) acap1 (ENSAMXG00000013034) ENSAMXG00000042645 ENSAMXG00000013079 si:ch73-335l21.2 (ENSAMXG00000035766) si:ch73-335l21.4 (ENSAMXG00000032709) dvl2 (ENSAMXG00000013102) acadvl (ENSAMXG00000013130) ENSAMXG00000041941 ponzr1 (ENSAMXG00000040115) ENSAMXG00000013152 ENSAMXG00000013165 ENSAMXG00000042790 cnpy4 (ENSAMXG00000013200) hdac8 (ENSAMXG00000013212) #22 cited1 (ENSAMXG00000026480) rps4x (ENSAMXG00000013268) #23 NHSL2 (ENSAMXG00000013279) arhgap36 (ENSAMXG00000013311) ENSAMXG00000040967 ENSAMXG00000031893 rasl11a (ENSAMXG00000035770) gc2 (ENSAMXG00000013352) ENSAMXG00000036482 col4a5 (ENSAMXG00000013997) ENSAMXG00000015997 ankrd46b (ENSAMXG00000037477) TMEM185A (ENSAMXG00000030854) ENSAMXG00000017164 SEMA4F (ENSAMXG00000017198) Red-bellied piranha MODERN SPECIES 63 cnpy4 (ENSPNAG00000010358) hdac8 (ENSPNAG00000010413) #22 cited1 (ENSPNAG00000010445) rps4x (ENSPNAG00000010466) #23 NHSL2 (ENSPNAG00000010493) col4a5 (ENSPNAG00000010600) ENSPNAG00000001426 ankrd46b (ENSPNAG00000010698) ENSPNAG00000010748 ENSPNAG00000010796 SEMA4F (ENSPNAG00000001446) m1ap (ENSPNAG00000010817) dok1b (ENSPNAG00000001452) nagk (ENSPNAG00000010852) ENSPNAG00000010871 hspa12b (ENSPNAG00000001468) cct7 (ENSPNAG00000001475) Electric eel MODERN SPECIES 126 ENSEEEG00000010618 cnpy4 (ENSEEEG00000010606) hdac8 (ENSEEEG00000010605) #22 cited1 (ENSEEEG00000010604) rps4x (ENSEEEG00000010561) #23 arhgap36 (ENSEEEG00000010554) ENSEEEG00000010495 rasl11a (ENSEEEG00000010489) gc2 (ENSEEEG00000010330) ENSEEEG00000010311 ENSEEEG00000010310 ENSEEEG00000010308 ENSEEEG00000010307 ENSEEEG00000010305 ankrd46b (ENSEEEG00000010299) ENSEEEG00000010298 pwp1 (ENSEEEG00000010182) cacna1c (ENSEEEG00000009960) Channel catfish MODERN SPECIES 26 SEMA4F (ENSIPUG00000001339) Slc16a13 (ENSIPUG00000001298) Acap2 (ENSIPUG00000001193) ENSIPUG00000001163 Irs1 (ENSIPUG00000001146) si:ch73-335l21.4 (ENSIPUG00000001141) si:ch73-335l21.2 (ENSIPUG00000001136) dvl2 (ENSIPUG00000001111) ACADVL (ENSIPUG00000001041) ENSIPUG00000001107 ponzr1 (ENSIPUG00000001032) ponzr1 (ENSIPUG00000001027) ENSIPUG00000001006 ENSIPUG00000000992 cnpy4 (ENSIPUG00000000974) hdac8 (ENSIPUG00000000898) #22 cited1 (ENSIPUG00000000879) rps4x (ENSIPUG00000000840) #23 NHSL2 (ENSIPUG00000000835) arhgap36 (ENSIPUG00000000815) ENSIPUG00000000775 zgc (ENSIPUG00000000761) gc2 (ENSIPUG00000000742) ENSIPUG00000000733 col4a5 (ENSIPUG00000000693) ENSIPUG00000000652 ankrd46 (ENSIPUG00000000638) t185a (ENSIPUG00000000614) ENSIPUG00000000597 ENSIPUG00000000581 tmem88 (ENSIPUG00000000572) Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000155047.bc ENSGT00940000154489.A.c ENSGT00950000183065.A ENSGT00390000009995 ENSGT01050000244841.A.a.b.qb.a ENSGT01080000257410.A.f.l ENSGT00940000157918 ENSGT00390000008139 ENSGT00940000163301.c.a.a.a ENSGT00880000138014.a ENSGT00940000158136 ENSGT00990000203752 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388.b ENSGT00940000162334 ENSGT00940000159264.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 35 ENSGT00940000154489.A.c.a ENSGT00950000183065.A.j ENSGT00390000009995 ENSGT01050000244841.A.a.b.qb.a.d ENSGT01080000257410.A.f.l.e ENSGT00940000157918.s ENSGT00390000008139.b ENSGT00940000163301.c.a.a.a ENSGT00880000138014.a.k ENSGT00940000158136.e ENSGT00950000183082.a.j.b ENSGT00990000203752.b ENSGT00940000160940 ENSGT00510000050937.n.a.a ENSGT00950000183118.A.c.b.a.b #21 ENSGT00940000157843.m #22 ENSGT00530000063624.B.d ENSGT00390000005569.j #23 ENSGT00950000182963.b.b.o.a ENSGT00940000153904.b.a ENSGT00940000153284.a.mc.a.a ENSGT00940000164592.d ENSGT00940000165991.r ENSGT00940000160883.b.a ENSGT00940000162034.a ENSGT00940000153991.a.a.ab ENSGT00940000164076.a.a.b ENSGT00940000157094.y.b ENSGT00940000162334.b ENSGT00940000159264.f.f ENSGT00940000159217.c.b Goldfish MODERN SPECIES 47 ENSCARG00000013615 tcf12 (ENSCARG00000013676) CGNL1 (ENSCARG00000014179) MYZAP (ENSCARG00000014192) gnrhr2 (ENSCARG00000014205) SLCO3A1 (ENSCARG00000014218) katnb1 (ENSCARG00000014248) tmem208 (ENSCARG00000014294) si:ch211-122f10.4 (ENSCARG00000014301) slc38a7 (ENSCARG00000014315) got2b (ENSCARG00000014368) ENSCARG00000015321 bmp15 (ENSCARG00000015333) leap2 (ENSCARG00000015338) PHKA1 (ENSCARG00000015395) #21 hdac8 (ENSCARG00000016264) #22 cited1 (ENSCARG00000016627) rps4x (ENSCARG00000016641) #23 ENSCARG00000016725 sdcbp (ENSCARG00000016730) ENSCARG00000016751 ASPH (ENSCARG00000016773) ggh (ENSCARG00000017078) NSMAF (ENSCARG00000017224) ANK2 (ENSCARG00000020228) camk2d1 (ENSCARG00000029535) ARSJ (ENSCARG00000029638) mad2l1 (ENSCARG00000029646) pde5ab (ENSCARG00000029696) ENSCARG00000030364 snai3 (ENSCARG00000030922) Cyprininae_a ANCESTRAL SPECIES 128 ENSGT00940000163854.b.b ENSGT00940000155047.bc.f.a ENSGT00940000154489.A.c.b ENSGT00950000183065.A.i ENSGT01050000244841.A.a.b.qb.a.c ENSGT01080000257410.A.f.l.f ENSGT00940000157918.t ENSGT00390000008139.a ENSGT00880000138014.a.l ENSGT00940000158136.f ENSGT00950000183082.a.j.a ENSGT00990000203752.a ENSGT00940000160940.m ENSGT00510000050937.n.a.a ENSGT00950000183118.A.c.b.a.b #21 ENSGT00940000157843.m #22 ENSGT00530000063624.B.d ENSGT00390000005569.j #23 ENSGT00950000182963.b.b.o.a ENSGT00940000153904.b.a ENSGT00940000153284.a.mc.a.a ENSGT00940000164592.d ENSGT00940000165991.r ENSGT00940000160883.b.a ENSGT00940000162034.a ENSGT00940000153991.a.a.ab ENSGT00940000164076.a.a.b ENSGT00940000157094.y.b ENSGT00940000162334.b ENSGT00940000159264.f.f ENSGT00940000159217.c.b Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 218 ENSSGRG00000052316 MYZAP (ENSSGRG00000052320) gnrhr2 (ENSSGRG00000052324) SLCO3A1 (ENSSGRG00000052372) katnb1 (ENSSGRG00000052373) tmem208 (ENSSGRG00000052393) ENSSGRG00000052394 si:ch211-122f10.4 (ENSSGRG00000052424) slc38a7 (ENSSGRG00000052427) slc38a7 (ENSSGRG00000052432) got2b (ENSSGRG00000052456) ENSSGRG00000052693 bmp15 (ENSSGRG00000052694) leap2 (ENSSGRG00000052695) PHKA1 (ENSSGRG00000052735) #21 hdac8 (ENSSGRG00000053809) #22 cited1 (ENSSGRG00000053823) rps4x (ENSSGRG00000053824) #23 ENSSGRG00000053827 arhgap36 (ENSSGRG00000053829) ENSSGRG00000053830 rasl11a (ENSSGRG00000053832) rasl11a (ENSSGRG00000053834) gc2 (ENSSGRG00000053841) IRS4 (ENSSGRG00000053874) COL4A5 (ENSSGRG00000053876) ENSSGRG00000053895 COL4A6 (ENSSGRG00000053896) ankrd46b (ENSSGRG00000053901) PAQR9 (ENSSGRG00000053904) pcolceb (ENSSGRG00000053906) Golden-line barbel MODERN SPECIES 604 katnb1 (ENSSGRG00000053833) tmem208 (ENSSGRG00000054025) ENSSGRG00000054027 si:ch211-122f10.4 (ENSSGRG00000054028) slc38a7 (ENSSGRG00000054030) ENSSGRG00000054033 got2b (ENSSGRG00000054048) ENSSGRG00000054119 bmp15 (ENSSGRG00000054120) leap2 (ENSSGRG00000054121) hdac8 (ENSSGRG00000054124) #22 rps4x (ENSSGRG00000054125) #23 ENSSGRG00000054127 arhgap36 (ENSSGRG00000054128) ENSSGRG00000054136 rasl11a (ENSSGRG00000054179) ENSSGRG00000054180 ENSSGRG00000054181 col4a5 (ENSSGRG00000054182) ENSSGRG00000054183 ENSSGRG00000054186 PAQR9 (ENSSGRG00000054193) pcolceb (ENSSGRG00000054209) per1b (ENSSGRG00000054213) Common carp reference MODERN SPECIES 6 ENSCCRG00000065458 tcf12 (ENSCCRG00000020680) ENSCCRG00000022482 MYZAP (ENSCCRG00000051158) ENSCCRG00000051160 ENSCCRG00000026913 katnb1 (ENSCCRG00000026881) tmem208 (ENSCCRG00000026861) ENSCCRG00000026857 si:ch211-122f10.4 (ENSCCRG00000026853) slc38a7 (ENSCCRG00000026852) got2b (ENSCCRG00000075394) bmp15 (ENSCCRG00000032632) leap2 (ENSCCRG00000049935) PHKA1 (ENSCCRG00000027034) #21 hdac8 (ENSCCRG00000053840) #22 cited1 (ENSCCRG00000076818) rps4x (ENSCCRG00000069181) #23 ENSCCRG00000066774 ENSCCRG00000016697 ENSCCRG00000078793 rasl11a (ENSCCRG00000042439) gc2 (ENSCCRG00000022788) ENSCCRG00000024939 ENSCCRG00000057269 ENSCCRG00000022165 ankrd46b (ENSCCRG00000019651) pcolceb (ENSCCRG00000007231) per1b (ENSCCRG00000007240) ENSCCRG00000081820 ENSCCRG00000074811 Cyprininae ANCESTRAL SPECIES 335 ENSGT00950000183118.A.c.b.a.a #21 ENSGT00940000157843.n #22 ENSGT00530000063624.B.c ENSGT00390000005569.i #23 ENSGT00950000182963.b.b.o.b ENSGT00940000153904.b.b ENSGT00940000153284.a.mc.a.b ENSGT00940000164592.c ENSGT00940000165991.q ENSGT00940000160883.b.b ENSGT00940000162034.b ENSGT00940000157678.d ENSGT00940000164076.a.a.a ENSGT00940000157094.y.a ENSGT00940000162334.a ENSGT00940000159264.f.e ENSGT00940000159217.c.a Cyprininae_a ANCESTRAL SPECIES ENSGT00940000157843.n #22 Common carp reference MODERN SPECIES mtfmt (ENSCCRG00000020025) ENSCCRG00000059617 ENSCCRG00000061281 tcf12 (ENSCCRG00000020670) ENSCCRG00000020687 MYZAP (ENSCCRG00000020691) gnrhr2 (ENSCCRG00000041602) ENSCCRG00000010955 katnb1 (ENSCCRG00000059520) si:ch211-122f10.4 (ENSCCRG00000026805) slc38a7 (ENSCCRG00000066966) got2b (ENSCCRG00000065897) bmp15 (ENSCCRG00000077691) leap2 (ENSCCRG00000032625) PHKA1 (ENSCCRG00000049375) #21 hdac8 (ENSCCRG00000026960) #22 cited1 (ENSCCRG00000056658) rps4x (ENSCCRG00000026927) #23 ENSCCRG00000063739 arhgap36 (ENSCCRG00000014502) ENSCCRG00000065649 rasl11a (ENSCCRG00000065657) gc2 (ENSCCRG00000042447) ENSCCRG00000024928 ENSCCRG00000073908 ENSCCRG00000054488 ENSCCRG00000061144 ankrd46b (ENSCCRG00000025376) pcolceb (ENSCCRG00000025382) per1b (ENSCCRG00000025395) ENSCCRG00000025510 Goldfish MODERN SPECIES 25 tcf12 (ENSCARG00000035412) CGNL1 (ENSCARG00000035688) MYZAP (ENSCARG00000036008) ENSCARG00000036075 SLCO3A1 (ENSCARG00000036124) katnb1 (ENSCARG00000036235) tmem208 (ENSCARG00000036285) si:dkey-286h2.3 (ENSCARG00000036297) si:ch211-122f10.4 (ENSCARG00000036314) slc38a7 (ENSCARG00000036393) got2b (ENSCARG00000036480) ENSCARG00000005831 bmp15 (ENSCARG00000005845) leap2 (ENSCARG00000005864) PHKA1 (ENSCARG00000005978) #21 hdac8 (ENSCARG00000006419) #22 cited1 (ENSCARG00000006545) rps4x (ENSCARG00000006557) #23 NHSL2 (ENSCARG00000006635) arhgap36 (ENSCARG00000006670) ENSCARG00000006719 rasl11a (ENSCARG00000006869) gc2 (ENSCARG00000007103) ENSCARG00000010828 ENSCARG00000010835 col4a5 (ENSCARG00000010842) ENSCARG00000010866 ENSCARG00000010895 ankrd46b (ENSCARG00000010908) PAQR9 (ENSCARG00000010921) pcolceb (ENSCARG00000010927) Zebrafish MODERN SPECIES 22 SLCO3A1 (ENSDARG00000068296) katnb1 (ENSDARG00000005456) tmem208 (ENSDARG00000068291) ENSDARG00000091514 si:dkey-286h2.3 (ENSDARG00000068290) ENSDARG00000092091 ENSDARG00000068283 cyp2x10.2 (ENSDARG00000006501) si:ch211-122f10.4 (ENSDARG00000052074) slc38a7 (ENSDARG00000012002) ENSDARG00000113187 got2b (ENSDARG00000005840) bmp15 (ENSDARG00000037491) leap2 (ENSDARG00000104654) PHKA1 (ENSDARG00000105159) #21 hdac8 (ENSDARG00000003021) #22 cited1 (ENSDARG00000077769) rps4x (ENSDARG00000014690) #23 NHSL2 (ENSDARG00000089066) arhgap36 (ENSDARG00000059672) ENSDARG00000074367 rasl11a (ENSDARG00000046013) gc2 (ENSDARG00000018329) col4a5 (ENSDARG00000052063) ENSDARG00000052061 ankrd46b (ENSDARG00000015780) PAQR9 (ENSDARG00000052059) pcolceb (ENSDARG00000052057) per1b (ENSDARG00000012499) ENSDARG00000086452 cartl (ENSDARG00000104297) Clupeiformes ANCESTRAL SPECIES 324 ENSGT00390000009664.a ENSGT00940000155191.b ENSGT00940000167512 ENSGT00940000159479.p.a.j ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b Denticle herring MODERN SPECIES serpine1 (ENSDCDG00000004683) ap1s1 (ENSDCDG00000004640) ENSDCDG00000004635 nat16l (ENSDCDG00000004633) NAT16 (ENSDCDG00000004631) ENSDCDG00000004627 ache (ENSDCDG00000004625) zgc:92664 (ENSDCDG00000004620) ENSDCDG00000004618 ENSDCDG00000004614 ENSDCDG00000004611 ENSDCDG00000004600 ENSDCDG00000004585 ENSDCDG00000004577 ENSDCDG00000004567 hdac8 (ENSDCDG00000004541) #22 cited1 (ENSDCDG00000004532) rps4x (ENSDCDG00000004529) #23 ENSDCDG00000004523 arhgap36 (ENSDCDG00000004517) ENSDCDG00000004510 rasl11a (ENSDCDG00000004508) gc2 (ENSDCDG00000003986) ENSDCDG00000003965 ankrd46b (ENSDCDG00000003954) TMEM185A (ENSDCDG00000003952) PHKA1 (ENSDCDG00000003880) #21 fam113 (ENSDCDG00000003859) rnaseka (ENSDCDG00000003856) leap2 (ENSDCDG00000003854) bmp15 (ENSDCDG00000003852) Atlantic herring MODERN SPECIES 9 ENSCHAG00000025905 kiaa0232 (ENSCHAG00000025910) cfap157 (ENSCHAG00000025912) tor2a (ENSCHAG00000025917) pmpca (ENSCHAG00000025927) inpp5e (ENSCHAG00000025981) ENSCHAG00000026004 rnaseka (ENSCHAG00000026235) alox12 (ENSCHAG00000026239) ENSCHAG00000026262 ENSCHAG00000026282 ENSCHAG00000026317 bmp15 (ENSCHAG00000026320) leap2 (ENSCHAG00000026321) PHKA1 (ENSCHAG00000026338) #21 hdac8 (ENSCHAG00000026502) #22 rps4x (ENSCHAG00000026509) #23 ENSCHAG00000026514 arhgap36 (ENSCHAG00000026517) USP12 (ENSCHAG00000026520) rasl11a (ENSCHAG00000026553) gc2 (ENSCHAG00000026566) ENSCHAG00000026687 ENSCHAG00000002388 ankrd46b (ENSCHAG00000003053) ENSCHAG00000003138 ENSCHAG00000003956 zgc:92664 (ENSCHAG00000003976) ache (ENSCHAG00000004001) ENSCHAG00000004075 NAT16 (ENSCHAG00000004139) Euteleosteomorpha ANCESTRAL SPECIES 165 ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.c.b ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000012182 Acanthomorphata ANCESTRAL SPECIES 142 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 Euacanthomorphacea ANCESTRAL SPECIES 41 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 Pinecone sodierfish MODERN SPECIES 9 zgc:92429 (ENSMMDG00005001967) ENSMMDG00005002007 ENSMMDG00005002017 ENSMMDG00005002026 zgc:109889 (ENSMMDG00005002029) htr2cl1 (ENSMMDG00005002037) ENSMMDG00005002086 ccnb3 (ENSMMDG00005002089) tnfsf10l (ENSMMDG00005002092) CLCN5 (ENSMMDG00005002238) ENSMMDG00005011054 ENSMMDG00005011055 ENSMMDG00005011059 leap2 (ENSMMDG00005011061) ENSMMDG00005011093 #21 hdac8 (ENSMMDG00005011498) #22 cited1 (ENSMMDG00005011863) rps4x (ENSMMDG00005011866) #23 ENSMMDG00005011873 arhgap36 (ENSMMDG00005011874) ENSMMDG00005011887 rasl11a (ENSMMDG00005013523) gc2 (ENSMMDG00005013541) ENSMMDG00005015273 ENSMMDG00005015276 ankrd46b (ENSMMDG00005015281) ENSMMDG00005015283 tmem185 (ENSMMDG00005015285) mus81 (ENSMMDG00005015293) ovol1a (ENSMMDG00005015454) ENSMMDG00005015458 Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 Tiger tail seahorse MODERN SPECIES 181 ENSHCOG00000017673 ENSHCOG00000017740 bmp15 (ENSHCOG00000017821) ENSHCOG00000017837 btr12 (ENSHCOG00000017873) ENSHCOG00000018866 ENSHCOG00000018927 casq1b (ENSHCOG00000019048) PEA15 (ENSHCOG00000019077) abcg2a (ENSHCOG00000019189) ENSHCOG00000019222 rnf150b (ENSHCOG00000019254) ENSHCOG00000019296 ache (ENSHCOG00000019333) PHKA1 (ENSHCOG00000000608) #21 hdac8 (ENSHCOG00000019407) #22 ENSHCOG00000019430 btg3 (ENSHCOG00000019452) ENSHCOG00000019468 PELI3 (ENSHCOG00000000520) RCE1 (ENSHCOG00000019531) cd248a (ENSHCOG00000019556) ENSHCOG00000019569 znf16l (ENSHCOG00000019583) cited1 (ENSHCOG00000000655) rps4x (ENSHCOG00000019605) #23 ENSHCOG00000019611 arhgap36 (ENSHCOG00000019651) ENSHCOG00000019702 rasl11a (ENSHCOG00000019709) zgc:162171 (ENSHCOG00000019724) Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT01050000244843.c.a.b.a.b.a.a Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT01050000244843.c.b.a.a ENSGT00990000204085 ENSGT01050000244843.c.a.a.b.b Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a ENSGT00940000163009.b.a.a.b.b ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a.l.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 Aplocheiloidei ANCESTRAL SPECIES 114 ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a.l.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000164076.a.a ENSGT00940000157094 Turquoise killifish MODERN SPECIES 1613 Nfu_g_1_009617 (ENSNFUG00015006699) zgc:109889 (ENSNFUG00015006708) HTR2CL1 (ENSNFUG00015006714) ENSNFUG00015006719 ENSNFUG00015006721 ENSNFUG00015006725 ENSNFUG00015006736 ENSNFUG00015006749 CCNB3 (ENSNFUG00015006756) TNFSF11 (ENSNFUG00015006766) CLCN5 (ENSNFUG00015006810) ENSNFUG00015007158 bmp15 (ENSNFUG00015007166) leap2 (ENSNFUG00015007170) ENSNFUG00015007313 #21 HDAC8 (ENSNFUG00015008243) #22 ENSNFUG00015008287 cited1 (ENSNFUG00015008291) ENSNFUG00015008300 arhgap36 (ENSNFUG00015008307) ENSNFUG00015008331 RASL11A (ENSNFUG00015008485) gc2 (ENSNFUG00015008610) GC2 (ENSNFUG00015010538) COL4A5 (ENSNFUG00015010565) COL4A6 (ENSNFUG00015010735) ankrd46b (ENSNFUG00015010792) ENSNFUG00015010798 KCNJ10 (ENSNFUG00015010812) pnp5a (ENSNFUG00015010830) capn1 (ENSNFUG00015011424) Mangrove rivulus MODERN SPECIES 587 ENSKMAG00000005278 ENSKMAG00000005027 #21 hdac8 (ENSKMAG00000004947) #22 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a.b ENSGT00940000163160.b.a.a.l.a ENSGT00940000163852.c.a.a.a.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000163009.b.a.a.b.b.t ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b NAME_4 ANCESTRAL SPECIES 209 ENSGT00940000163852.c.a.a.b ENSGT00940000163160.b.a.a.l.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 Mummichog MODERN SPECIES 2341 ENSFHEG00000019174 ENSFHEG00000019237 ENSFHEG00000019248 ccnb3 (ENSFHEG00000019267) tnfsf10l (ENSFHEG00000019293) CLCN5 (ENSFHEG00000019325) ENSFHEG00000019338 ENSFHEG00000019346 bmp15 (ENSFHEG00000000498) leap2 (ENSFHEG00000019362) ENSFHEG00000019441 #21 hdac8 (ENSFHEG00000019488) #22 cited1 (ENSFHEG00000019540) rps4x (ENSFHEG00000019585) #23 ENSFHEG00000019599 arhgap36 (ENSFHEG00000019617) ENSFHEG00000019677 rasl11a (ENSFHEG00000019684) gc2 (ENSFHEG00000019749) ENSFHEG00000019754 col4a5 (ENSFHEG00000019763) ENSFHEG00000019790 ENSFHEG00000019866 ankrd46b (ENSFHEG00000019904) ENSFHEG00000019917 ENSFHEG00000019923 ENSFHEG00000019927 Sheepshead minnow MODERN SPECIES 453 DNAJC16 (ENSCVAG00000012521) casp9 (ENSCVAG00000012532) ENSCVAG00000012557 ENSCVAG00000012575 bmp15 (ENSCVAG00000012586) leap2 (ENSCVAG00000012590) ENSCVAG00000012965 #21 hdac8 (ENSCVAG00000012998) #22 cited1 (ENSCVAG00000013021) rps4x (ENSCVAG00000013044) #23 ENSCVAG00000013051 ENSCVAG00000000825 arhgap36 (ENSCVAG00000013079) ENSCVAG00000013125 rasl11a (ENSCVAG00000013135) gc2 (ENSCVAG00000013187) ENSCVAG00000013194 ENSCVAG00000013204 Poeciliinae ANCESTRAL SPECIES 37 ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a.b ENSGT00940000163160.b.a.a.l.a ENSGT00940000163852.c.a.a.a.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000163009.b.a.a.b.b.t ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b Poecilia ANCESTRAL SPECIES 58 ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a.b ENSGT00940000163160.b.a.a.l.a ENSGT00940000163009.b.a.a.b.b.t.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000163009.b.a.a.b.b.t.b ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b NAME_6 ANCESTRAL SPECIES 104 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a.b ENSGT00940000163160.b.a.a.l.a ENSGT00940000163009.b.a.a.b.b.t.a ENSGT00940000163160.b.a.a.l.b ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000153991.b.b ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01050000244843.c.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b Sailfin molly MODERN SPECIES 403 ENSPLAG00000004172 ENSPLAG00000004156 bmp15 (ENSPLAG00000004144) leap2 (ENSPLAG00000004136) ENSPLAG00000004102 #21 hdac8 (ENSPLAG00000003944) #22 cited1 (ENSPLAG00000003906) rps4x (ENSPLAG00000003887) #23 ENSPLAG00000003847 ENSPLAG00000003803 Amazon molly MODERN SPECIES 380 ENSPFOG00000005585 zgc:109889 (ENSPFOG00000005603) htr2cl1 (ENSPFOG00000005677) ENSPFOG00000022442 ENSPFOG00000005735 ENSPFOG00000023491 ccnb3 (ENSPFOG00000005860) ENSPFOG00000023849 ENSPFOG00000023285 tnfsf10l (ENSPFOG00000005940) CLCN5 (ENSPFOG00000006000) ENSPFOG00000006333 bmp15 (ENSPFOG00000006462) leap2 (ENSPFOG00000006472) PHKA1 (ENSPFOG00000006553) #21 hdac8 (ENSPFOG00000020106) #22 rps4x (ENSPFOG00000007003) #23 ENSPFOG00000007051 ENSPFOG00000007083 Guppy MODERN SPECIES 448 ENSPREG00000009928 ENSPREG00000009935 ENSPREG00000009945 ENSPREG00000009952 ENSPREG00000009980 ENSPREG00000010124 ENSPREG00000010132 ccnb3 (ENSPREG00000010170) tnfsf10l (ENSPREG00000010200) CLCN5 (ENSPREG00000010232) ENSPREG00000010265 ENSPREG00000010274 bmp15 (ENSPREG00000010282) leap2 (ENSPREG00000010292) ENSPREG00000010368 #21 hdac8 (ENSPREG00000010598) #22 mettl3 (ENSPREG00000010644) si:dkey-85k7.7 (ENSPREG00000010679) tm4sf5 (ENSPREG00000010687) ENSPREG00000010701 zgc:103586 (ENSPREG00000010715) fis1 (ENSPREG00000010749) cldn15a (ENSPREG00000010908) dnajc3b (ENSPREG00000010979) naa38 (ENSPREG00000011017) CHD3 (ENSPREG00000011044) tnfsf12 (ENSPREG00000011108) sat2a.2 (ENSPREG00000011128) ENSPREG00000011146 ENSPREG00000011156 MAN2B2 (ENSPREG00000011170) Platyfish MODERN SPECIES 5 ENSXMAG00000019690 zgc:109889 (ENSXMAG00000027249) htr2cl1 (ENSXMAG00000015068) ENSXMAG00000012153 ENSXMAG00000025882 ENSXMAG00000029033 ENSXMAG00000026521 ccnb3 (ENSXMAG00000015047) tnfsf10l (ENSXMAG00000015036) CLCN5 (ENSXMAG00000014926) ENSXMAG00000028345 ENSXMAG00000027843 bmp15 (ENSXMAG00000024656) leap2 (ENSXMAG00000025509) PHKA1 (ENSXMAG00000014862) #21 hdac8 (ENSXMAG00000014850) #22 cited1 (ENSXMAG00000025214) rps4x (ENSXMAG00000014827) #23 ENSXMAG00000014823 ENSXMAG00000019846 arhgap36 (ENSXMAG00000014818) ENSXMAG00000026126 rasl11a (ENSXMAG00000023032) gc2 (ENSXMAG00000014729) ENSXMAG00000027555 COL4A5 (ENSXMAG00000014667) ENSXMAG00000014539 ankrd46b (ENSXMAG00000001947) ENSXMAG00000024761 ENSXMAG00000023477 ENSXMAG00000021963 Oryzias ANCESTRAL SPECIES 29 ENSGT01030000234754 ENSGT00940000156397.a.b ENSGT00940000166741 ENSGT01030000234599.a.b.d.a.b.a ENSGT01030000234599.a.b.d.b.a.b ENSGT00950000182872.f.b.b ENSGT00940000156907.p.b.b.a.a ENSGT00940000154807.a.b.a.a.f ENSGT00650000094959 ENSGT00940000164143.a.b ENSGT00940000164143.a.a ENSGT00940000163520.A.a.a.b.d.a.l ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00390000000062.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000153991.a.a ENSGT00940000157094 ENSGT00940000161519 ENSGT00940000160206.e ENSGT00940000164991.a.a ENSGT00940000159445 Oryzias_b ANCESTRAL SPECIES 18 ENSGT01030000234754 ENSGT00940000156397.a.b ENSGT00940000166741 ENSGT01030000234599.a.b.d.a.b.a ENSGT01030000234599.a.b.d.b.a.b ENSGT00950000182872.f.b.b ENSGT00940000156907.p.b.b.a.a ENSGT00940000154807.a.b.a.a.f ENSGT00650000094959 ENSGT00940000164143.a.b ENSGT00940000164143.a.a ENSGT00940000163520.A.a.a.b.d.a.l ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00390000000062.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000153991.a.a ENSGT00940000157094 ENSGT00940000161519 ENSGT00940000160206.e ENSGT00940000164991.a.a ENSGT00940000159445 Indian medaka MODERN SPECIES 19 ENSOMEG00000021411 spsb4a (ENSOMEG00000021373) SLC25A36 (ENSOMEG00000021336) ENSOMEG00000021257 ENSOMEG00000020724 ndrg2 (ENSOMEG00000020643) hnrnpc (ENSOMEG00000020488) ENSOMEG00000020449 ENSOMEG00000020415 ENSOMEG00000020407 ENSOMEG00000020389 ENSOMEG00000020380 leap2 (ENSOMEG00000020370) ENSOMEG00000020344 #21 sycp3 (ENSOMEG00000020251) hdac8 (ENSOMEG00000020217) #22 cited1 (ENSOMEG00000020143) rps4x (ENSOMEG00000020132) #23 ENSOMEG00000020079 arhgap36 (ENSOMEG00000020045) ENSOMEG00000019979 rasl11a (ENSOMEG00000019923) gc2 (ENSOMEG00000019813) ENSOMEG00000019728 ENSOMEG00000000684 ENSOMEG00000019688 ankrd46b (ENSOMEG00000019679) ENSOMEG00000019670 ENSOMEG00000019656 ENSOMEG00000019635 ENSOMEG00000019606 Javanese ricefish MODERN SPECIES 9 ENSOJAG00000016232 znf219 (ENSOJAG00000016258) ENSOJAG00000016313 ENSOJAG00000016323 ENSOJAG00000016347 ENSOJAG00000016364 ndrg2 (ENSOJAG00000016391) hnrnpc (ENSOJAG00000016583) ENSOJAG00000016589 ENSOJAG00000016596 ENSOJAG00000016609 ENSOJAG00000016659 ENSOJAG00000016680 ENSOJAG00000016721 #21 sycp3 (ENSOJAG00000016756) hdac8 (ENSOJAG00000016782) #22 cited1 (ENSOJAG00000016886) rps4x (ENSOJAG00000016899) #23 ENSOJAG00000016931 ENSOJAG00000017081 rasl11a (ENSOJAG00000017499) gc2 (ENSOJAG00000017633) ENSOJAG00000018952 col4a5 (ENSOJAG00000018971) ENSOJAG00000019047 ankrd46b (ENSOJAG00000019134) ENSOJAG00000019150 ENSOJAG00000019158 ENSOJAG00000019187 ENSOJAG00000019227 ENSOJAG00000019453 Oryzias_a ANCESTRAL SPECIES 33 ENSGT00940000156397.a.b ENSGT00940000166741 ENSGT01030000234599.a.b.d.a.b.a ENSGT01030000234599.a.b.d.b.a.b ENSGT00950000182872.f.b.b ENSGT00940000156907.p.b.b.a.a ENSGT00940000154807.a.b.a.a.f ENSGT00650000094959 ENSGT00940000164143.a.b ENSGT00940000164143.a.a ENSGT00940000163520.A.a.a.b.d.a.l.c ENSGT00940000163520.A.a.a.b.d.a.l.d.a.b ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00390000000062.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000161519 ENSGT00940000160206.e ENSGT00940000164991.a.a ENSGT00940000159445 ENSGT00390000018123.a.b Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000025562 ENSORLG00000025573 ENSORLG00000023511 ndrg2 (ENSORLG00000010039) ENSORLG00000009999 ENSORLG00000026328 ENSORLG00000023989 ENSORLG00000009967 ENSORLG00000009961 ENSORLG00000027523 ENSORLG00000024630 ENSORLG00000026481 ENSORLG00000030130 PHKA1 (ENSORLG00000009902) #21 scp3 (ENSORLG00000009617) hdac8 (ENSORLG00000009606) #22 cited1 (ENSORLG00000009588) rps4x (ENSORLG00000009584) #23 ENSORLG00000030053 ENSORLG00000009563 arhgap36 (ENSORLG00000009559) ENSORLG00000009550 rasl11a (ENSORLG00000026940) gc2 (ENSORLG00000009512) ENSORLG00000027597 ENSORLG00000023381 col4a5 (ENSORLG00000009416) ENSORLG00000027342 ENSORLG00000009315 ankrd46b (ENSORLG00000009086) ENSORLG00000009076 Chinese medaka MODERN SPECIES 291 ENSOSIG00000015912 leap2 (ENSOSIG00000015913) sycp3 (ENSOSIG00000017056) hdac8 (ENSOSIG00000017058) #22 cited1 (ENSOSIG00000017059) rps4x (ENSOSIG00000017061) #23 Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT00940000163711.b.e.b.a.a ENSGT00940000177359 ENSGT01050000244843.c.b.a.b Cichlidae ANCESTRAL SPECIES 20 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a.e.b ENSGT00940000163160.b.a.a.h.a.b ENSGT00940000163852.c.a.a.e.a.b ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT01090000260059.a.b.b.a.a.b.b.d.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359.a ENSGT01030000234592.A.a.b.i.b.b.a.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00940000156187 ENSGT00800000124060.A.a ENSGT00390000005739.a.a ENSGT00390000015415 ENSGT00950000182924.A.a ENSGT00940000165739 ENSGT00390000005498 ENSGT00940000158388 ENSGT01050000244843.c.a.b.a.a.b.a.b.a.a ENSGT01050000244843.c.a.b.a.a.b.a.b.b.b ENSGT01030000234592.A.a.b.i.b.b.a.b ENSGT00940000157094 ENSGT00940000164076.a.a ENSGT00990000209318 ENSGT01090000260059.a.b.b.a.a.b.b.d.b.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00510000050937 ENSGT00940000160940 ENSGT00940000163160.b.a.a.h.a.a.b.a ENSGT00940000159479 Pseudocrenilabrinae_A ANCESTRAL SPECIES 35 ENSGT00390000004237.o ENSGT00390000004237.p ENSGT00940000165739 ENSGT00390000005498 ENSGT00940000158388 ENSGT01050000244843.c.a.b.a.a.b.a.b.a.a ENSGT01050000244843.c.a.b.a.a.b.a.b.b.b ENSGT01030000234592.A.a.b.i.b.b.a.b ENSGT00940000157094 ENSGT00940000164076.a.a ENSGT01090000260059.a.b.b.a.a.b.b.d.b.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00510000050937 ENSGT00940000160940 ENSGT00940000163160.b.a.a.h.a.a.b.a ENSGT00940000159479 Haplochromini ANCESTRAL SPECIES 39 ENSGT00390000004237.o ENSGT00390000004237.p ENSGT00940000165739 ENSGT00390000005498 ENSGT00940000158388 ENSGT01050000244843.c.a.b.a.a.b.a.b.a.a.b ENSGT00940000157094 ENSGT00940000164076.a.a ENSGT01090000260059.a.b.b.a.a.b.b.d.b.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00510000050937 ENSGT00940000160940 ENSGT00940000154603.B.l.j.h.c Burton s mouthbrooder MODERN SPECIES 1213 hdac8 (ENSHBUG00000012190) #22 cited1 (ENSHBUG00000012160) rps4x (ENSHBUG00000012145) #23 Haplochromini_A ANCESTRAL SPECIES 56 ENSGT01090000260059.a.b.b.a.a.b.b.d.b.b ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00510000050937 ENSGT00940000160940 ENSGT00940000154603.B.l.j.h.c P. nyererei MODERN SPECIES 586 ENSPNYG00000017372 hdac8 (ENSPNYG00000017388) #22 cited1 (ENSPNYG00000017419) rps4x (ENSPNYG00000017450) #23 ENSPNYG00000017536 ENSPNYG00000017552 ENSPNYG00000017557 arhgap36 (ENSPNYG00000017572) ENSPNYG00000017614 rasl11a (ENSPNYG00000017665) gc2 (ENSPNYG00000017689) ENSPNYG00000017722 ENSPNYG00000017728 ENSPNYG00000017737 PHKA1 (ENSPNYG00000017789) #21 leap2 (ENSPNYG00000017938) bmp15 (ENSPNYG00000017968) Haplochromini_B ANCESTRAL SPECIES 65 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.b ENSGT01090000260059.a.b.b.a.a.b.b.d.b.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00510000050937 ENSGT00940000160940 ENSGT00950000183145.B.a.b.d.e.b.a.a.a.a.b Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005019870 ENSMZEG00005019873 ENSMZEG00005019881 ENSMZEG00005019886 ENSMZEG00005019888 ENSMZEG00005019891 ENSMZEG00005019894 ENSMZEG00005019899 ENSMZEG00005019907 ENSMZEG00005019913 ENSMZEG00005019917 ENSMZEG00005019924 ENSMZEG00005019927 ankrd46b (ENSMZEG00005019932) ENSMZEG00005019936 hdac8 (ENSMZEG00005019954) #22 cited1 (ENSMZEG00005019960) rps4x (ENSMZEG00005019963) #23 ENSMZEG00005019984 ENSMZEG00005019996 arhgap36 (ENSMZEG00005020002) ENSMZEG00005020018 rasl11a (ENSMZEG00005020026) gc2 (ENSMZEG00005020035) ENSMZEG00005020047 ENSMZEG00005020052 ENSMZEG00005020055 ENSMZEG00005020056 PHKA1 (ENSMZEG00005020060) #21 leap2 (ENSMZEG00005020070) bmp15 (ENSMZEG00005020073) Eastern happy MODERN SPECIES 15 ENSACLG00000017934 ENSACLG00000017948 ENSACLG00000017955 ENSACLG00000017968 ENSACLG00000017979 ENSACLG00000018001 ENSACLG00000018072 ENSACLG00000018080 ENSACLG00000018092 ankrd46b (ENSACLG00000018115) ENSACLG00000018170 ENSACLG00000018820 ENSACLG00000018829 ENSACLG00000018882 ENSACLG00000018906 hdac8 (ENSACLG00000018919) #22 cited1 (ENSACLG00000019034) rps4x (ENSACLG00000019047) #23 ENSACLG00000019148 ENSACLG00000019185 arhgap36 (ENSACLG00000019189) ENSACLG00000019245 rasl11a (ENSACLG00000019293) gc2 (ENSACLG00000019399) ENSACLG00000019505 ENSACLG00000019515 ENSACLG00000019524 PHKA1 (ENSACLG00000019567) #21 leap2 (ENSACLG00000020172) bmp15 (ENSACLG00000020179) ENSACLG00000020187 Lyretail cichlid MODERN SPECIES 463 ENSNBRG00000011918 hdac8 (ENSNBRG00000011887) #22 cited1 (ENSNBRG00000011867) rps4x (ENSNBRG00000011820) #23 ENSNBRG00000011813 arhgap36 (ENSNBRG00000011784) ENSNBRG00000011769 ENSNBRG00000011740 rasl11a (ENSNBRG00000011713) gc2 (ENSNBRG00000011606) ENSNBRG00000011509 ENSNBRG00000011466 ENSNBRG00000011451 ENSNBRG00000011434 PHKA1 (ENSNBRG00000011195) #21 leap2 (ENSNBRG00000011121) ENSNBRG00000011111 Nile tilapia MODERN SPECIES 15 ENSONIG00000000022 ENSONIG00000039804 ENSONIG00000034748 ENSONIG00000034905 ENSONIG00000040937 ENSONIG00000027839 ENSONIG00000043050 ENSONIG00000040839 ankrd46b (ENSONIG00000004980) ENSONIG00000028918 ENSONIG00000039584 ENSONIG00000035192 ENSONIG00000004997 ENSONIG00000031582 cited1 (ENSONIG00000029267) hdac8 (ENSONIG00000011850) #22 rps4x (ENSONIG00000011852) #23 ENSONIG00000011856 ENSONIG00000036430 ENSONIG00000042813 arhgap36 (ENSONIG00000011859) ENSONIG00000011862 rasl11a (ENSONIG00000011866) gc2 (ENSONIG00000011867) ENSONIG00000033231 ENSONIG00000037570 ENSONIG00000011881 ENSONIG00000028665 ENSONIG00000031857 ENSONIG00000021021 PHKA1 (ENSONIG00000011883) #21 Midas cichlid MODERN SPECIES 602 bmp15 (ENSACIG00000012943) leap2 (ENSACIG00000012917) PHKA1 (ENSACIG00000012857) #21 ENSACIG00000012838 hdac8 (ENSACIG00000012815) #22 cited1 (ENSACIG00000012795) rps4x (ENSACIG00000012752) #23 ENSACIG00000012740 Pomacentridae ANCESTRAL SPECIES 29 ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000157678 ENSGT00940000168406 ENSGT00940000157234 ENSGT00940000161024 ENSGT00390000000917 ENSGT00940000155401 ENSGT00940000155075.a.a Pomacentridae_A ANCESTRAL SPECIES 29 ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000157678 ENSGT00940000168406 ENSGT00940000157234 ENSGT00940000161024 ENSGT00390000000917 ENSGT00940000155401 ENSGT00940000155075.a.a Amphiprion ANCESTRAL SPECIES 24 ENSGT00940000163009.b.a.a.b.b.cb ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000157678 ENSGT00940000153991.a.a ENSGT00940000168406 ENSGT00940000157234 ENSGT00940000161024 ENSGT00390000000917 ENSGT00940000155401 Clown anemonefish MODERN SPECIES 573 tmem86b (ENSAOCG00000018868) ccnb3 (ENSAOCG00000018920) tnfsf10l (ENSAOCG00000018975) CLCN5 (ENSAOCG00000019074) ENSAOCG00000019090 mibp2 (ENSAOCG00000019104) ENSAOCG00000019133 bmp15 (ENSAOCG00000019141) leap2 (ENSAOCG00000019148) ENSAOCG00000019253 #21 hdac8 (ENSAOCG00000001389) #22 cited1 (ENSAOCG00000019306) rps4x (ENSAOCG00000019356) #23 Orange clownfish MODERN SPECIES 15 zgc:109889 (ENSAPEG00000015644) htr2cl1 (ENSAPEG00000015608) ENSAPEG00000015585 aspdh (ENSAPEG00000015547) tmem86b (ENSAPEG00000015480) ENSAPEG00000015413 ccnb3 (ENSAPEG00000015333) tnfsf10l (ENSAPEG00000015304) CLCN5 (ENSAPEG00000015221) ENSAPEG00000015203 ENSAPEG00000015190 ENSAPEG00000015166 bmp15 (ENSAPEG00000015154) leap2 (ENSAPEG00000015146) ENSAPEG00000014990 #21 hdac8 (ENSAPEG00000014917) #22 cited1 (ENSAPEG00000014902) rps4x (ENSAPEG00000014819) #23 ENSAPEG00000014786 arhgap36 (ENSAPEG00000014746) ENSAPEG00000014703 rasl11a (ENSAPEG00000014649) gc2 (ENSAPEG00000014510) ENSAPEG00000014486 ENSAPEG00000014474 ENSAPEG00000014424 ENSAPEG00000014400 ankrd46b (ENSAPEG00000014386) ENSAPEG00000014373 HGFAC (ENSAPEG00000014329) DOK7 (ENSAPEG00000014303) Spiny chromis MODERN SPECIES 428 ENSAPOG00000006593 #21 hdac8 (ENSAPOG00000006563) #22 cited1 (ENSAPOG00000006517) rps4x (ENSAPOG00000006493) #23 ENSAPOG00000006452 EIF4E (ENSAPOG00000006396) metap1 (ENSAPOG00000006373) adh5 (ENSAPOG00000006322) ENSAPOG00000006305 ENSAPOG00000006287 Bicolor damselfish MODERN SPECIES 1183 tnfsf10l (ENSSPAG00000016691) CLCN5 (ENSSPAG00000016615) ENSSPAG00000016587 ENSSPAG00000016574 bmp15 (ENSSPAG00000016570) leap2 (ENSSPAG00000016560) PHKA1 (ENSSPAG00000016354) #21 hdac8 (ENSSPAG00000016258) #22 cited1 (ENSSPAG00000016239) rps4x (ENSSPAG00000016161) #23 Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000153991.a.a ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT01050000244843.c.b.a.a Eupercaria ANCESTRAL SPECIES 19 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT01050000244843.c.a.b.a.b.a.a ENSGT01050000244843.c.a.b.a.a.a.a.a.a ENSGT01050000244843.c.b.a.a Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01080000257449 ENSGT01050000244843.c.a.b.a.b.a.a ENSGT01050000244843.c.a.b.a.a.a.a.a.a ENSGT01050000244843.c.b.a.a Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 538 ENSLBEG00000001305 bmp15 (ENSLBEG00000001336) leap2 (ENSLBEG00000001461) ENSLBEG00000001489 #21 hdac8 (ENSLBEG00000001613) #22 cited1 (ENSLBEG00000001724) rps4x (ENSLBEG00000001762) #23 ENSLBEG00000001845 ENSLBEG00000001893 Ballan wrasse MODERN SPECIES 3121 ENSLBEG00000010043 #21 hdac8 (ENSLBEG00000009984) #22 Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000177359 ENSGT01050000244843.c.b.a.b ENSGT01030000234592.A.a.b.i.b ENSGT01050000244843.c.a.b.a.a.b.a.b Perciformes ANCESTRAL SPECIES 19 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b.d ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01050000244843.c.b.a.b ENSGT01030000234592.A.a.b.i.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 Cottioidei ANCESTRAL SPECIES 65 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b.d ENSGT01090000259997.a.e ENSGT00940000164842 ENSGT00940000157904.b ENSGT00940000158972 ENSGT00390000001134.b.`b.b ENSGT00390000014072.A ENSGT01060000248594.e.a.n Lumpfish MODERN SPECIES 9 ENSCLMG00005004706 ENSCLMG00005004781 ENSCLMG00005004910 zgc:109889 (ENSCLMG00005004913) htr2cl1 (ENSCLMG00005004919) ENSCLMG00005004949 ENSCLMG00005004956 ccnb3 (ENSCLMG00005004958) tnfsf10l (ENSCLMG00005004961) CLCN5 (ENSCLMG00005004992) ENSCLMG00005009439 ENSCLMG00005009441 bmp15 (ENSCLMG00005009442) leap2 (ENSCLMG00005009446) PHKA1 (ENSCLMG00005009462) #21 hdac8 (ENSCLMG00005010034) #22 cited1 (ENSCLMG00005010035) rps4x (ENSCLMG00005010036) #23 NHSL2 (ENSCLMG00005010039) arhgap36 (ENSCLMG00005010041) ENSCLMG00005010042 rasl11a (ENSCLMG00005010807) gc2 (ENSCLMG00005010813) ENSCLMG00005010945 ENSCLMG00005010946 zgc:77880 (ENSCLMG00005010947) stk26 (ENSCLMG00005010949) ENSCLMG00005011465 dachb (ENSCLMG00005011466) cnpy3 (ENSCLMG00005011468) trpc5a (ENSCLMG00005011470) Stickleback MODERN SPECIES 7 ENSGACG00000018784 ENSGACG00000018782 ankrd46b (ENSGACG00000018781) ENSGACG00000018779 ENSGACG00000018775 ENSGACG00000018772 ENSGACG00000018767 ENSGACG00000018764 ENSGACG00000018761 ENSGACG00000018759 CLCN5 (ENSGACG00000018753) ENSGACG00000018751 bmp15 (ENSGACG00000018750) leap2 (ENSGACG00000018749) ENSGACG00000018743 #21 hdac8 (ENSGACG00000018737) #22 rps4x (ENSGACG00000018720) #23 ENSGACG00000018715 rasl11a (ENSGACG00000018711) gc2 (ENSGACG00000018704) ENSGACG00000018703 zgc:77880 (ENSGACG00000018702) FRMD7 (ENSGACG00000018697) fga (ENSGACG00000018694) fgb (ENSGACG00000018674) tlr2 (ENSGACG00000018669) ENSGACG00000018668 rnf175 (ENSGACG00000018660) ENSGACG00000018658 ENSGACG00000018652 ENSGACG00000018651 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b.d ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01050000244843.c.b.a.b ENSGT01030000234592.A.a.b.i.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 ENSGT00390000005498 Pike perch MODERN SPECIES 19 zgc:162171 (ENSSLUG00000009907) ENSSLUG00000009624 zgc:92429 (ENSSLUG00000009580) ENSSLUG00000008942 ENSSLUG00000008872 zgc:109889 (ENSSLUG00000008856) htr2cl1 (ENSSLUG00000008836) ENSSLUG00000008814 ccnb3 (ENSSLUG00000008796) tnfsf10l (ENSSLUG00000008785) CLCN5 (ENSSLUG00000002720) ENSSLUG00000002470 bmp15 (ENSSLUG00000002460) leap2 (ENSSLUG00000002457) PHKA1 (ENSSLUG00000001944) #21 hdac8 (ENSSLUG00000001495) #22 rps4x (ENSSLUG00000001429) #23 ENSSLUG00000001421 arhgap36 (ENSSLUG00000001419) ENSSLUG00000001337 rasl11a (ENSSLUG00000001312) ENSSLUG00000001310 trpc5a (ENSSLUG00000001298) cnpy3 (ENSSLUG00000001292) ENSSLUG00000001290 ENSSLUG00000001288 dachb (ENSSLUG00000001287) FRMD7 (ENSSLUG00000001283) ENSSLUG00000001176 zgc:77880 (ENSSLUG00000001124) ENSSLUG00000001117 Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.eb.b ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.j ENSGT00940000164076.a.a ENSGT00940000157094 European seabass MODERN SPECIES 4 ENSDLAG00005000350 zgc:92429 (ENSDLAG00005000323) ENSDLAG00005000253 ENSDLAG00005000176 zgc:109889 (ENSDLAG00005000161) htr2cl1 (ENSDLAG00005000141) ENSDLAG00005000121 ENSDLAG00005030944 ccnb3 (ENSDLAG00005000101) tnfsf10l (ENSDLAG00005030386) ENSDLAG00005021079 ENSDLAG00005021014 ENSDLAG00005021001 leap2 (ENSDLAG00005031248) ENSDLAG00005020675 #21 hdac8 (ENSDLAG00005020620) #22 cited1 (ENSDLAG00005030168) rps4x (ENSDLAG00005020589) #23 ENSDLAG00005027574 ENSDLAG00005020578 arhgap36 (ENSDLAG00005020557) ENSDLAG00005020415 rasl11a (ENSDLAG00005030193) gc2 (ENSDLAG00005018135) ENSDLAG00005026908 ENSDLAG00005033848 ENSDLAG00005026874 ENSDLAG00005034788 ENSDLAG00005035013 ankrd46b (ENSDLAG00005018502) ENSDLAG00005011493 Large yellow croaker MODERN SPECIES 485 lemd3 (ENSLCRG00005005794) ENSLCRG00005005840 tmbim4 (ENSLCRG00005005857) ENSLCRG00005005884 b2m (ENSLCRG00005005905) hspa14 (ENSLCRG00005005911) rragd (ENSLCRG00005005923) ENSLCRG00005005967 ENSLCRG00005005982 KIF1C (ENSLCRG00005006041) ENSLCRG00005006102 ENSLCRG00005006108 prelid1b (ENSLCRG00005006113) ENSLCRG00005006165 ENSLCRG00005006345 #21 hdac8 (ENSLCRG00005006647) #22 cited1 (ENSLCRG00005006923) rps4x (ENSLCRG00005006930) #23 ENSLCRG00005006977 ENSLCRG00005007037 arhgap36 (ENSLCRG00005007065) ENSLCRG00005007436 rasl11a (ENSLCRG00005009760) gc2 (ENSLCRG00005009940) ENSLCRG00005011041 ENSLCRG00005011088 ENSLCRG00005011125 anapc10 (ENSLCRG00005011129) abce1 (ENSLCRG00005011153) ENSLCRG00005011193 ENSLCRG00005011221 Gilthead seabream MODERN SPECIES 1 ENSSAUG00010010900 ENSSAUG00010010901 ENSSAUG00010010902 ENSSAUG00010010904 ENSSAUG00010010905 ENSSAUG00010010906 ENSSAUG00010010909 ENSSAUG00010010910 ENSSAUG00010010912 ENSSAUG00010010914 ENSSAUG00010010917 ENSSAUG00010010919 bmp15 (ENSSAUG00010010924) leap2 (ENSSAUG00010010925) ENSSAUG00010010938 #21 hdac8 (ENSSAUG00010011114) #22 cited1 (ENSSAUG00010011118) rps4x (ENSSAUG00010011119) #23 ENSSAUG00010011126 ENSSAUG00010011136 ENSSAUG00010011142 ENSSAUG00010011144 arhgap36 (ENSSAUG00010011148) ENSSAUG00010011151 ENSSAUG00010011152 rasl11a (ENSSAUG00010011153) gc2 (ENSSAUG00010011156) ENSSAUG00010011277 ENSSAUG00010011278 ENSSAUG00010011284 ENSSAUG00010011299 Tetraodontidae ANCESTRAL SPECIES 35 ENSGT00940000158132.m.a ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479.db ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00940000163852.c.a.a.o.a ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 ENSGT00940000165739 ENSGT00390000004237 Fugu MODERN SPECIES 20 ENSTRUG00000004246 ENSTRUG00000002169 ENSTRUG00000028480 zgc:109889 (ENSTRUG00000030080) htr2cl1 (ENSTRUG00000005007) ENSTRUG00000024753 ccnb3 (ENSTRUG00000005623) tnfsf10l (ENSTRUG00000005871) CLCN5 (ENSTRUG00000005959) ENSTRUG00000033143 ENSTRUG00000020248 ENSTRUG00000030736 ENSTRUG00000023198 ENSTRUG00000007175 #21 ENSTRUG00000028757 hdac8 (ENSTRUG00000025628) #22 cited1 (ENSTRUG00000023697) rps4x (ENSTRUG00000008109) #23 ENSTRUG00000008446 ENSTRUG00000008226 arhgap36 (ENSTRUG00000008457) ENSTRUG00000008490 rasl11a (ENSTRUG00000008651) gc2 (ENSTRUG00000008848) ENSTRUG00000022256 ENSTRUG00000030256 col4a5 (ENSTRUG00000009825) ENSTRUG00000004079 ENSTRUG00000010428 ankrd46b (ENSTRUG00000020397) ENSTRUG00000027412 Tetraodon MODERN SPECIES 26 pak1 (ENSTNIG00000003751) NLRX1 (ENSTNIG00000006412) efhd1 (ENSTNIG00000006411) kcnj13 (ENSTNIG00000006410) ENSTNIG00000018619 zgc:109889 (ENSTNIG00000018620) htr2cl1 (ENSTNIG00000018621) ENSTNIG00000018622 ccnb3 (ENSTNIG00000018623) tnfsf10l3 (ENSTNIG00000005788) CLCN5 (ENSTNIG00000005787) ENSTNIG00000005786 bmp15 (ENSTNIG00000005785) ENSTNIG00000005784 ENSTNIG00000005783 #21 hdac8 (ENSTNIG00000005782) #22 cited1 (ENSTNIG00000005781) cited1 (ENSTNIG00000002872) rps4x (ENSTNIG00000002873) #23 ENSTNIG00000002874 ENSTNIG00000006771 arhgap36 (ENSTNIG00000006770) ENSTNIG00000007801 ENSTNIG00000007800 ADGRB1 (ENSTNIG00000007799) ASCC3 (ENSTNIG00000005079) ENSTNIG00000004826 zgc:158659 (ENSTNIG00000002862) eif4e2rs1 (ENSTNIG00000002861) ENSTNIG00000002860 ENSTNIG00000005462 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 ENSGT00940000165739 ENSGT00390000004237 Carangaria ANCESTRAL SPECIES 20 ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT01030000234592.A.a.b.i.b ENSGT01050000244843.c.a.b.a.a.b.a.b ENSGT00940000158388 ENSGT00390000005498 Pleuronectoidei ANCESTRAL SPECIES 58 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 ENSGT00940000165739 ENSGT00390000004237 Tongue sole MODERN SPECIES pfdn2 (ENSCSEG00000000410) nit1 (ENSCSEG00000000414) ENSCSEG00000000421 zgc:109889 (ENSCSEG00000000430) htr2cl1 (ENSCSEG00000000435) ENSCSEG00000000442 ccnb3 (ENSCSEG00000000450) PHKA1 (ENSCSEG00000000469) #21 ENSCSEG00000000551 ENSCSEG00000000558 ENSCSEG00000000561 ENSCSEG00000000562 ENSCSEG00000000569 CLCN5 (ENSCSEG00000000584) tnfsf10l (ENSCSEG00000000613) hdac8 (ENSCSEG00000000624) #22 cited1 (ENSCSEG00000000646) rps4x (ENSCSEG00000000654) #23 ENSCSEG00000000666 arhgap36 (ENSCSEG00000000682) ENSCSEG00000000699 rasl11a (ENSCSEG00000000717) gc2 (ENSCSEG00000000737) ENSCSEG00000000753 COL4A5 (ENSCSEG00000000760) ENSCSEG00000000788 ankrd46b (ENSCSEG00000000847) tmem185 (ENSCSEG00000000850) mus81 (ENSCSEG00000000858) ovol1a (ENSCSEG00000000868) cmasa (ENSCSEG00000000879) Turbot MODERN SPECIES 11 zgc:85858 (ENSSMAG00000021461) ENSSMAG00000005412 ENSSMAG00000005427 ENSSMAG00000003055 ENSSMAG00000003045 zgc:109889 (ENSSMAG00000003025) htr2cl1 (ENSSMAG00000003010) ENSSMAG00000002991 ccnb3 (ENSSMAG00000002977) tnfsf10l (ENSSMAG00000002948) ENSSMAG00000002876 ENSSMAG00000002848 ENSSMAG00000002836 leap2 (ENSSMAG00000033383) ENSSMAG00000002449 #21 hdac8 (ENSSMAG00000002387) #22 rps4x (ENSSMAG00000002292) #23 ENSSMAG00000002265 arhgap36 (ENSSMAG00000002176) ENSSMAG00000002218 rasl11a (ENSSMAG00000002148) gc2 (ENSSMAG00000001858) ENSSMAG00000001808 ENSSMAG00000001581 ENSSMAG00000025919 ENSSMAG00000037908 ankrd46b (ENSSMAG00000033954) ENSSMAG00000023001 ENSSMAG00000001458 ENSSMAG00000001430 mus81 (ENSSMAG00000001412) Carangaria_A ANCESTRAL SPECIES 26 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT01100000266879 ENSGT00940000163160.b.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.n #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094.d ENSGT01080000257449 Seriola ANCESTRAL SPECIES 24 ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000163852.c.a.a ENSGT00940000160459 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000178616 ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569.n #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094.d ENSGT01100000264629.a ENSGT00990000204085.a ENSGT01030000234592.A.a.b.i.b ENSGT01050000244843.c.a.b.a.a.b.a.b Yellowtail amberjack MODERN SPECIES 3046 ENSSLDG00000002450 ENSSLDG00000002549 zgc:109889 (ENSSLDG00000002576) htr2cl1 (ENSSLDG00000002688) ENSSLDG00000002719 ccnb3 (ENSSLDG00000002738) tnfsf10l (ENSSLDG00000002785) CLCN5 (ENSSLDG00000002812) ENSSLDG00000002883 ENSSLDG00000002900 ENSSLDG00000002914 bmp15 (ENSSLDG00000002942) leap2 (ENSSLDG00000002960) PHKA1 (ENSSLDG00000002981) #21 hdac8 (ENSSLDG00000003140) #22 cited1 (ENSSLDG00000003205) rps4x (ENSSLDG00000003261) #23 ENSSLDG00000003324 arhgap36 (ENSSLDG00000003343) ENSSLDG00000003429 rasl11a (ENSSLDG00000003489) gc2 (ENSSLDG00000003540) ENSSLDG00000003644 COL4A5 (ENSSLDG00000003682) ENSSLDG00000003998 ankrd46b (ENSSLDG00000004154) ENSSLDG00000004176 ENSSLDG00000004233 ENSSLDG00000004473 Greater amberjack MODERN SPECIES 126 zgc:92429 (ENSSDUG00000014178) ENSSDUG00000014267 ENSSDUG00000014359 zgc:109889 (ENSSDUG00000014367) htr2cl1 (ENSSDUG00000014409) ENSSDUG00000014421 ENSSDUG00000014429 ccnb3 (ENSSDUG00000014442) tnfsf10l (ENSSDUG00000014488) CLCN5 (ENSSDUG00000014512) ENSSDUG00000014592 ENSSDUG00000014614 bmp15 (ENSSDUG00000014620) leap2 (ENSSDUG00000014628) PHKA1 (ENSSDUG00000014648) #21 hdac8 (ENSSDUG00000014838) #22 cited1 (ENSSDUG00000014882) rps4x (ENSSDUG00000014906) #23 ENSSDUG00000014954 arhgap36 (ENSSDUG00000015003) ENSSDUG00000015045 rasl11a (ENSSDUG00000015078) gc2 (ENSSDUG00000015096) ENSSDUG00000015142 ENSSDUG00000015148 ENSSDUG00000015180 ankrd46b (ENSSDUG00000015242) ENSSDUG00000015251 ENSSDUG00000015261 ENSSDUG00000015272 ENSSDUG00000015287 Barramundi perch MODERN SPECIES 255 ENSLCAG00010024676 ccnb3 (ENSLCAG00010024658) tnfsf10l (ENSLCAG00010024652) CLCN5 (ENSLCAG00010024557) ENSLCAG00010024487 ENSLCAG00010024490 bmp15 (ENSLCAG00010024484) leap2 (ENSLCAG00010024483) ENSLCAG00010024349 #21 hdac8 (ENSLCAG00010024272) #22 cited1 (ENSLCAG00010024261) rps4x (ENSLCAG00010024234) #23 ENSLCAG00010024223 arhgap36 (ENSLCAG00010024211) ENSLCAG00010024197 rasl11a (ENSLCAG00010024190) gc2 (ENSLCAG00010024172) ENSLCAG00010024166 ENSLCAG00010024154 ENSLCAG00010024133 ankrd46b (ENSLCAG00010024129) ENSLCAG00010024126 Anabantaria ANCESTRAL SPECIES 19 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000259997.a.d.b.b.a ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 ENSGT00940000165739 Zig-zag eel MODERN SPECIES 9 zgc:162171 (ENSMAMG00000011125) ENSMAMG00000011068 ENSMAMG00000027306 zgc:92429 (ENSMAMG00000011061) ENSMAMG00000011016 ENSMAMG00000011007 zgc:109889 (ENSMAMG00000010924) htr2cl1 (ENSMAMG00000010903) ccnb3 (ENSMAMG00000010859) tnfsf10l (ENSMAMG00000024540) ENSMAMG00000010792 ENSMAMG00000010774 ENSMAMG00000010757 leap2 (ENSMAMG00000010754) ENSMAMG00000010544 #21 hdac8 (ENSMAMG00000010472) #22 cited1 (ENSMAMG00000010455) rps4x (ENSMAMG00000010421) #23 ENSMAMG00000010393 arhgap36 (ENSMAMG00000010291) ENSMAMG00000010234 rasl11a (ENSMAMG00000025972) gc2 (ENSMAMG00000010171) ENSMAMG00000024261 ENSMAMG00000010161 ENSMAMG00000010149 ENSMAMG00000010058 ankrd46b (ENSMAMG00000009913) ENSMAMG00000009886 mus81 (ENSMAMG00000009785) ovol1a (ENSMAMG00000009768) Anabantoidei ANCESTRAL SPECIES 22 ENSGT00940000165121.b ENSGT00950000183068.a.a.a.b ENSGT00940000159429 ENSGT00940000164406 ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.a.c ENSGT01050000244937.a.b.a.a ENSGT00940000160459 ENSGT00650000094770 ENSGT01070000253816.a.a.a.d ENSGT00940000153763.a ENSGT00940000159479 ENSGT00940000160940 ENSGT00510000050937 ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT01090000259997.a.d.b.b.a ENSGT00940000162034 ENSGT00940000164076.a.a ENSGT00940000157094 ENSGT00940000158388 ENSGT00390000005498 ENSGT00940000165739 Climbing perch MODERN SPECIES 9 zgc:92429 (ENSATEG00000013203) ENSATEG00000013228 ENSATEG00000013332 zgc:109889 (ENSATEG00000013348) htr2cl1 (ENSATEG00000013369) ccnb3 (ENSATEG00000013389) ENSATEG00000013441 tnfsf10l (ENSATEG00000013463) ENSATEG00000013503 ENSATEG00000013595 ENSATEG00000013605 ENSATEG00000026841 leap2 (ENSATEG00000025219) ENSATEG00000013707 #21 ENSATEG00000028436 hdac8 (ENSATEG00000014067) #22 cited1 (ENSATEG00000014096) rps4x (ENSATEG00000014116) #23 ENSATEG00000014146 arhgap36 (ENSATEG00000014180) ENSATEG00000014244 rasl11a (ENSATEG00000027759) gc2 (ENSATEG00000014324) ENSATEG00000014624 ENSATEG00000014634 ENSATEG00000014648 ENSATEG00000014680 ENSATEG00000028449 ENSATEG00000026485 ankrd46b (ENSATEG00000014892) ENSATEG00000014916 Siamese fighting fish MODERN SPECIES 10 vbp1 (ENSBSLG00000001628) RAB39B (ENSBSLG00000001634) zgc:162171 (ENSBSLG00000001641) ENSBSLG00000001664 zgc:92429 (ENSBSLG00000001832) ENSBSLG00000002583 htr2cl1 (ENSBSLG00000003087) ccnb3 (ENSBSLG00000003095) tnfsf10l (ENSBSLG00000003111) CLCN5 (ENSBSLG00000003130) ENSBSLG00000003674 ENSBSLG00000003717 bmp15 (ENSBSLG00000003728) leap2 (ENSBSLG00000003738) ENSBSLG00000004000 #21 hdac8 (ENSBSLG00000004777) #22 ENSBSLG00000005296 ENSBSLG00000005502 ENSBSLG00000005529 ENSBSLG00000005564 ENSBSLG00000005588 ENSBSLG00000005605 ENSBSLG00000005624 ENSBSLG00000005639 ENSBSLG00000005687 ENSBSLG00000005815 ENSBSLG00000005823 ENSBSLG00000005829 ENSBSLG00000005837 ENSBSLG00000005840 ENSBSLG00000005850 Cod MODERN SPECIES 8 ENSGMOG00000027328 zgc:92429 (ENSGMOG00000015367) ENSGMOG00000030446 ENSGMOG00000028135 zgc:109889 (ENSGMOG00000027049) htr2cl1 (ENSGMOG00000032489) ENSGMOG00000034325 ccnb3 (ENSGMOG00000028821) tnfsf10l (ENSGMOG00000035908) ENSGMOG00000013464 ENSGMOG00000030791 ENSGMOG00000034838 ENSGMOG00000023189 ENSGMOG00000033299 PHKA1 (ENSGMOG00000016935) #21 hdac8 (ENSGMOG00000019012) #22 cited1 (ENSGMOG00000033891) rps4x (ENSGMOG00000019004) #23 arhgap36 (ENSGMOG00000036826) ENSGMOG00000013713 rasl11a (ENSGMOG00000013698) gc2 (ENSGMOG00000013666) ENSGMOG00000032493 col4a5 (ENSGMOG00000004625) ENSGMOG00000024150 ankrd46b (ENSGMOG00000026423) ENSGMOG00000019668 ENSGMOG00000024903 ENSGMOG00000011396 ENSGMOG00000011438 ENSGMOG00000011473 Protacanthopterygii ANCESTRAL SPECIES 61 ENSGT01050000244937.a.b.a.a ENSGT00950000182962.a.b.a.c ENSGT01060000248564.b.a.b.b.b.a ENSGT00940000164406 ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c ENSGT00940000165121.b ENSGT00940000158132.m.a ENSGT00390000018904 ENSGT00940000157843 #22 ENSGT00530000063624.B ENSGT00390000005569 #23 ENSGT00950000182963.b.b ENSGT00940000153904.b ENSGT00940000153284.a.mc.a ENSGT00940000164592 ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000162034 ENSGT00940000164076.a.a.f ENSGT00940000164076.a.a.e ENSGT00940000157094 ENSGT00730000111366 ENSGT00940000157029 ENSGT00940000153669.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 58 ENSGT01070000253816.a.a.a.d.b ENSGT01050000244937.a.b.a.a.c.b ENSGT00950000182962.a.b.a.c.a ENSGT01060000248564.b.a.b.b.b.a.c ENSGT00940000164406.o.a ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c.a ENSGT00940000165121.b.d ENSGT00940000158132.m.a.c ENSGT00390000018904.g ENSGT00940000157843.q #22 ENSGT00530000063624.B.j ENSGT00390000005569.k #23 ENSGT00950000182963.b.b.w.a ENSGT00940000153904.b.e ENSGT00940000153284.a.mc.a.f ENSGT00940000164592.f ENSGT00940000160883.b.e ENSGT00940000162034 ENSGT00940000164076.a.a.e ENSGT00940000157094.b ENSGT00990000210653 ENSGT00940000153669.b.r ENSGT00940000154344.a.f ENSGT00940000153299.a.a.d ENSGT00950000182887.C.a.a.a.b.a.a Huchen MODERN SPECIES 171 ENSHHUG00000023966 htr2cl1 (ENSHHUG00000023975) zgc:109889 (ENSHHUG00000023982) ENSHHUG00000023986 ENSHHUG00000023989 ENSHHUG00000023991 ENSHHUG00000024008 zgc:92429 (ENSHHUG00000024418) ENSHHUG00000024421 zgc:162171 (ENSHHUG00000024614) RAB39B (ENSHHUG00000024619) vbp1 (ENSHHUG00000024626) hdac8 (ENSHHUG00000024639) #22 cited1 (ENSHHUG00000024651) rps4x (ENSHHUG00000024657) #23 ENSHHUG00000024800 arhgap36 (ENSHHUG00000024807) ENSHHUG00000024834 rasl11a (ENSHHUG00000024876) ENSHHUG00000024891 ENSHHUG00000024895 ENSHHUG00000024898 ENSHHUG00000024906 ENSHHUG00000024927 ENSHHUG00000024931 ENSHHUG00000024940 ENSHHUG00000024963 ENSHHUG00000024979 Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00960000187089 ENSGT00390000007726.b ENSGT00940000159026.j ENSGT00510000050937.e.a ENSGT00940000159479.q.a ENSGT01070000253816.a.a.a.d.b ENSGT01050000244937.a.b.a.a.c.b ENSGT00950000182962.a.b.a.c.a ENSGT01060000248564.b.a.b.b.b.a.c ENSGT00940000164406.o.a ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c.a ENSGT00940000165121.b.d ENSGT00940000158132.m.a.c ENSGT00390000018904.g ENSGT00940000157843.q #22 ENSGT00530000063624.B.j ENSGT00390000005569.k #23 ENSGT00950000182963.b.b.w.a ENSGT00940000153904.b.e ENSGT00940000153284.a.mc.a.f ENSGT00940000164592.f ENSGT00940000160883.b.e ENSGT00940000157678.ob ENSGT00940000164076.a.a.e ENSGT00940000157094.b ENSGT00990000210653 ENSGT00730000111366.o ENSGT00940000157029.n ENSGT00940000153669.b.r ENSGT00940000154344.a.f Salmo ANCESTRAL SPECIES 25 ENSGT00960000187089 ENSGT00390000007726.b ENSGT00940000159026.j ENSGT00510000050937.e.a ENSGT00940000159479.q.a ENSGT01070000253816.a.a.a.d.b ENSGT01050000244937.a.b.a.a.c.b ENSGT00950000182962.a.b.a.c.a ENSGT01060000248564.b.a.b.b.b.a.c ENSGT00940000164406.o.a ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c.a ENSGT00940000165121.b.d ENSGT00940000158132.m.a.c ENSGT00390000018904.g ENSGT00940000157843.q #22 ENSGT00530000063624.B.j ENSGT00390000005569.k #23 ENSGT00950000182963.b.b.w.a ENSGT00940000153904.b.e ENSGT00940000153284.a.mc.a.f ENSGT00940000164592.f ENSGT00940000160883.b.e ENSGT00940000157678.ob ENSGT00940000157094.b ENSGT00990000210653 ENSGT00730000111366.o ENSGT00940000157029.n ENSGT00940000153669.b.r ENSGT00940000154344.a.f ENSGT00940000153299.a.a.d Atlantic salmon MODERN SPECIES 26 ccdc166 (ENSSSAG00000094260) ENSSSAG00000003319 syt4 (ENSSSAG00000056840) ENSSSAG00000119588 ENSSSAG00000056850 ENSSSAG00000056858 ENSSSAG00000056916 ENSSSAG00000084228 zgc:109889 (ENSSSAG00000060645) ENSSSAG00000057091 zgc:92429 (ENSSSAG00000064040) ENSSSAG00000064118 zgc:162171 (ENSSSAG00000067505) ENSSSAG00000085591 vbp1 (ENSSSAG00000084461) hdac8 (ENSSSAG00000067514) #22 cited1 (ENSSSAG00000106816) rps4x (ENSSSAG00000067529) #23 ENSSSAG00000067551 arhgap36 (ENSSSAG00000067565) ENSSSAG00000067582 rasl11a (ENSSSAG00000096072) ENSSSAG00000083803 ENSSSAG00000118234 col4a5 (ENSSSAG00000064682) ENSSSAG00000109471 ENSSSAG00000090893 ankrd46b (ENSSSAG00000064738) ENSSSAG00000064874 ENSSSAG00000064879 mtm1 (ENSSSAG00000064922) River trout MODERN SPECIES 38 leap2 (ENSSTUG00000035457) ENSSTUG00000035453 ENSSTUG00000035427 ENSSTUG00000035374 ENSSTUG00000035351 ENSSTUG00000035346 htr2cl1 (ENSSTUG00000035330) zgc:109889 (ENSSTUG00000035310) ENSSTUG00000035302 ENSSTUG00000035023 zgc:92429 (ENSSTUG00000034949) ENSSTUG00000032574 zgc:162171 (ENSSTUG00000032424) RAB39B (ENSSTUG00000032411) vbp1 (ENSSTUG00000032394) hdac8 (ENSSTUG00000032236) #22 cited1 (ENSSTUG00000032220) rps4x (ENSSTUG00000032067) #23 ENSSTUG00000032017 arhgap36 (ENSSTUG00000031900) ENSSTUG00000031627 rasl11a (ENSSTUG00000031594) ENSSTUG00000031580 col4a5 (ENSSTUG00000031494) ENSSTUG00000031343 ankrd46b (ENSSTUG00000031250) ENSSTUG00000031242 ENSSTUG00000031234 mtmr1a (ENSSTUG00000029887) CD99L2 (ENSSTUG00000029828) hmgb3a (ENSSTUG00000029810) Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00390000017284.a.b.c.c ENSGT00940000154427.B ENSGT00390000007726.b ENSGT00940000159026.j ENSGT00940000159479.q.a ENSGT01070000253816.a.a.a.d.b ENSGT01050000244937.a.b.a.a.c.b ENSGT00950000182962.a.b.a.c.a ENSGT01060000248564.b.a.b.b.b.a.c ENSGT00940000164406.o.a ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c.a ENSGT00940000165121.b.d ENSGT00940000158132.m.a.c ENSGT00390000018904.g ENSGT00940000157843.q #22 ENSGT00530000063624.B.j ENSGT00390000005569.k #23 ENSGT00950000182963.b.b.w.a ENSGT00940000153904.b.e ENSGT00940000153284.a.mc.a.f ENSGT00940000164592.f ENSGT00940000160883.b.e ENSGT00940000157678.ob ENSGT00940000164076.a.a.e ENSGT00940000157094.b ENSGT00990000210653 ENSGT00730000111366.o ENSGT00940000157029.n ENSGT00940000153669.b.r ENSGT00940000154344.a.f Rainbow trout MODERN SPECIES 13 htr2cl1 (ENSOMYG00000027324) ENSOMYG00000052889 ENSOMYG00000057081 ENSOMYG00000039111 zgc:109889 (ENSOMYG00000041191) ENSOMYG00000041194 ENSOMYG00000036740 ENSOMYG00000077436 zgc:92429 (ENSOMYG00000036719) ENSOMYG00000036613 ENSOMYG00000055330 zgc:162171 (ENSOMYG00000036572) ENSOMYG00000065332 ENSOMYG00000060573 vbp1 (ENSOMYG00000036453) hdac8 (ENSOMYG00000036512) #22 rs4x (ENSOMYG00000036395) #23 ENSOMYG00000036312 arhgap36 (ENSOMYG00000036256) ENSOMYG00000056479 ENSOMYG00000036194 rasl11a (ENSOMYG00000036169) ENSOMYG00000061984 col4a5 (ENSOMYG00000041201) ENSOMYG00000041209 ENSOMYG00000053629 ankrd46b (ENSOMYG00000041219) ENSOMYG00000041266 ENSOMYG00000041261 ENSOMYG00000074902 mtm1 (ENSOMYG00000041286) Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00390000017284.a.b.c.c ENSGT00940000154427.B ENSGT00390000007726.b ENSGT00940000159026.j ENSGT00940000159479.q.a ENSGT01070000253816.a.a.a.d.b ENSGT01050000244937.a.b.a.a.c.b ENSGT00950000182962.a.b.a.c.a ENSGT01060000248564.b.a.b.b.b.a.c ENSGT00940000164406.o.a ENSGT00940000159429 ENSGT00950000183068.a.a.a.b.c.a ENSGT00940000165121.b.d ENSGT00940000158132.m.a.c ENSGT00390000018904.g ENSGT00940000157843.q #22 ENSGT00530000063624.B.j ENSGT00390000005569.k #23 ENSGT00950000182963.b.b.w.a ENSGT00940000153904.b.e ENSGT00940000153284.a.mc.a.f ENSGT00940000164592.f ENSGT00940000160883.b.e ENSGT00940000157678.ob ENSGT00940000164076.a.a.e ENSGT00940000157094.b ENSGT00990000210653 ENSGT00730000111366.o ENSGT00940000153669.b.r ENSGT00940000154344.a.f ENSGT00940000153299.a.a.d Chinook salmon MODERN SPECIES 6 PAIP2B (ENSOTSG00005017659) ENSOTSG00005017660 ENSOTSG00005017662 syt4 (ENSOTSG00005017719) ENSOTSG00005017720 ENSOTSG00005017721 htr2cl1 (ENSOTSG00005017722) zgc:109889 (ENSOTSG00005017724) ENSOTSG00005017725 ENSOTSG00005017728 zgc:92429 (ENSOTSG00005017758) ENSOTSG00005017761 zgc:162171 (ENSOTSG00005018031) RAB39B (ENSOTSG00005018032) vbp1 (ENSOTSG00005018033) hdac8 (ENSOTSG00005018034) #22 cited1 (ENSOTSG00005018193) rps4x (ENSOTSG00005018194) #23 ENSOTSG00005018198 arhgap36 (ENSOTSG00005018199) ENSOTSG00005018205 rasl11a (ENSOTSG00005018300) ENSOTSG00005018303 col4a5 (ENSOTSG00005018308) ENSOTSG00005018323 ankrd46b (ENSOTSG00005018328) ENSOTSG00005018334 ENSOTSG00005018336 mtmr1a (ENSOTSG00005033863) cd99l2 (ENSOTSG00005036950) hmgb3a (ENSOTSG00005036954) Coho salmon MODERN SPECIES 29 ENSOKIG00005045307 ENSOKIG00005045310 ENSOKIG00005045315 syt4 (ENSOKIG00005045335) ENSOKIG00005045342 ENSOKIG00005045350 htr2cl1 (ENSOKIG00005045370) zgc:109889 (ENSOKIG00005045373) ENSOKIG00005045390 ENSOKIG00005045423 zgc:92429 (ENSOKIG00005045537) ENSOKIG00005045575 zgc:162171 (ENSOKIG00005045706) RAB39B (ENSOKIG00005045714) vbp1 (ENSOKIG00005045741) hdac8 (ENSOKIG00005045782) #22 cited1 (ENSOKIG00005045836) rps4x (ENSOKIG00005045846) #23 ENSOKIG00005045886 arhgap36 (ENSOKIG00005045903) ENSOKIG00005045930 rasl11a (ENSOKIG00005045973) ENSOKIG00005045987 col4a5 (ENSOKIG00005045991) ENSOKIG00005046012 ankrd46b (ENSOKIG00005046054) ENSOKIG00005046085 ENSOKIG00005046093 mtmr1a (ENSOKIG00005002077) CD99L2 (ENSOKIG00005002764) hmgb3a (ENSOKIG00005002804) Salmoninae ANCESTRAL SPECIES 673 ENSGT01050000244937.a.b.a.a.c.a.a.a ENSGT00950000182962.a.b.a.c.b ENSGT01060000248564.b.a.b.b.b.a.d ENSGT00940000164406.o.b ENSGT00950000183068.a.a.a.b.d ENSGT00950000183068.a.a.a.b.c.b ENSGT00940000165121.b.c ENSGT00940000158132.m.a.d ENSGT00390000018904.h ENSGT00940000157843.r #22 ENSGT00530000063624.B.i ENSGT00390000005569.l #23 ENSGT00950000182963.b.b.w.b Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00940000160940 ENSGT00940000158857 ENSGT00940000159479.r ENSGT00940000153763.a.c ENSGT01070000253816.a.a.a.d.a ENSGT00940000160459 ENSGT01050000244937.a.b.a.a.c.a.b ENSGT01050000244937.a.b.a.a.c.a.a.a ENSGT00950000182962.a.b.a.c.b ENSGT01060000248564.b.a.b.b.b.a.d ENSGT00940000164406.o.b ENSGT00950000183068.a.a.a.b.c.b ENSGT00940000165121.b.c ENSGT00940000158132.m.a.d ENSGT00390000018904.h ENSGT00940000157843.r #22 ENSGT01030000235770 ENSGT00530000063624.B.i ENSGT00390000005569.l #23 ENSGT00950000182963.b.b.w.b ENSGT00940000153904.b.f ENSGT00940000153284.a.mc.a.e ENSGT00940000164592.e ENSGT00940000165991 ENSGT00940000160883.b.f ENSGT00940000162034 ENSGT00940000164076.a.a.f ENSGT00940000157094.a ENSGT00730000111366.p ENSGT00940000157029.m ENSGT00940000153669.b.q Salmo ANCESTRAL SPECIES 51 ENSGT00510000050937.e.b ENSGT00940000160940 ENSGT00940000158857 ENSGT00940000159479.q.b ENSGT00940000153763.a.c ENSGT01070000253816.a.a.a.d.a ENSGT00940000160459 ENSGT01050000244937.a.b.a.a.c.a.b ENSGT00950000182962.a.b.a.c.b ENSGT01060000248564.b.a.b.b.b.a.d ENSGT00940000164406.o.b ENSGT00950000183068.a.a.a.b.c.b ENSGT00940000165121.b.c ENSGT00940000158132.m.a.d ENSGT00390000018904.h ENSGT00940000157843.r #22 ENSGT01030000235770 ENSGT00530000063624.B.i ENSGT00390000005569.l #23 ENSGT00950000182963.b.b.w.b ENSGT00940000153904.b.f ENSGT00940000153284.a.mc.a.e ENSGT00940000164592.e ENSGT00940000165991 ENSGT00940000160883.b.f ENSGT00940000162034 ENSGT00940000164076.a.a.e ENSGT00940000157094.a ENSGT00730000111366.p ENSGT00940000153669.b.q ENSGT00940000154344.a.e River trout MODERN SPECIES 35 PAIP2B (ENSSTUG00000005271) nagk (ENSSTUG00000005226) dok1b (ENSSTUG00000005217) m1ap (ENSSTUG00000005188) PHKA1 (ENSSTUG00000003517) #21 bmp15 (ENSSTUG00000003379) ENSSTUG00000003369 CLCN5 (ENSSTUG00000002190) ENSSTUG00000002136 htr2cl1 (ENSSTUG00000002127) ENSSTUG00000002124 ENSSTUG00000002116 zgc:162171 (ENSSTUG00000002108) RAB39B (ENSSTUG00000002101) vbp1 (ENSSTUG00000002077) hdac8 (ENSSTUG00000002071) #22 ENSSTUG00000002063 ENSSTUG00000002060 ENSSTUG00000002055 arhgap36 (ENSSTUG00000002040) ENSSTUG00000001995 rasl11a (ENSSTUG00000001972) gc2 (ENSSTUG00000001503) ENSSTUG00000001461 ENSSTUG00000001422 ENSSTUG00000001415 ENSSTUG00000001409 ankrd46b (ENSSTUG00000001396) mtmr1a (ENSSTUG00000000683) cd99l2 (ENSSTUG00000000614) hmgb3a (ENSSTUG00000000604) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000157843.r #22 Rainbow trout MODERN SPECIES 30 ENSOMYG00000021128 ccnb3 (ENSOMYG00000027263) ENSOMYG00000066843 ENSOMYG00000060885 ENSOMYG00000071600 htr2cl1 (ENSOMYG00000068997) zgc:109889 (ENSOMYG00000027344) ENSOMYG00000065255 ENSOMYG00000027523 ENSOMYG00000027486 zgc:162171 (ENSOMYG00000027469) ENSOMYG00000036540 vbp1 (ENSOMYG00000027407) ENSOMYG00000027445 ENSOMYG00000048544 hdac8 (ENSOMYG00000027430) #22 ENSOMYG00000067552 ENSOMYG00000064526 cited1 (ENSOMYG00000027426) rps4x (ENSOMYG00000027364) #23 ENSOMYG00000027591 arhgap36 (ENSOMYG00000027610) ENSOMYG00000063627 ENSOMYG00000027833 rasl11a (ENSOMYG00000028786) gc2 (ENSOMYG00000001466) ENSOMYG00000001509 ENSOMYG00000001584 ENSOMYG00000001610 ankrd46b (ENSOMYG00000070566) ENSOMYG00000050802 Northern pike MODERN SPECIES 23 ENSELUG00000012327 CLCN5 (ENSELUG00000012244) ENSELUG00000012169 ccnb3 (ENSELUG00000000440) ENSELUG00000034299 htr2cl1 (ENSELUG00000026854) zgc:109889 (ENSELUG00000014559) ENSELUG00000029980 ENSELUG00000014480 ENSELUG00000014415 chrd1 (ENSELUG00000014106) ENSELUG00000014028 zgc:162171 (ENSELUG00000027083) RAB39B (ENSELUG00000013957) vbp1 (ENSELUG00000013935) hdac8 (ENSELUG00000013857) #22 rps4x (ENSELUG00000013768) #23 ENSELUG00000013638 ENSELUG00000013542 arhgap36 (ENSELUG00000013403) ENSELUG00000013283 rasl11a (ENSELUG00000013206) gc2 (ENSELUG00000001313) ENSELUG00000013023 COL4A5 (ENSELUG00000013002) ENSELUG00000012957 ENSELUG00000031869 ENSELUG00000012911 ankrd46b (ENSELUG00000024842) ENSELUG00000014617 ENSELUG00000014677 Osteoglossiformes ANCESTRAL SPECIES 33 ENSGT00940000153609.a.l ENSGT00940000154651.a.b ENSGT00390000004952.a.b.l ENSGT00390000000155.a.b.e ENSGT00390000018904.c ENSGT00940000158132 ENSGT00940000165121 ENSGT00950000183068.a.a.a.a ENSGT00940000159429 ENSGT00940000164406.l ENSGT01060000248564.b.a.b.b.b.a ENSGT00950000182962.a.b.d ENSGT01050000244937.a.b.a.a ENSGT01070000253816.a.a.a.c.a.a.a ENSGT00950000183118.A.c.b.a #21 ENSGT00940000157843 #22 ENSGT00530000063624.B.a ENSGT00950000182963.b.b.e ENSGT00940000153904.b.h ENSGT00940000153284.a.mc.a.g.b ENSGT00940000164592.b.b ENSGT00940000165991 ENSGT00940000160883.b ENSGT00940000165066.g.a ENSGT00990000212832 ENSGT00940000157029.f ENSGT00940000154344.a.a ENSGT00940000153299.a.a ENSGT00950000182887.C.a.a.a.a.a.c ENSGT00390000010184 ENSGT00730000111225 Asian bonytongue MODERN SPECIES 4 ubl3b (ENSSFOG00015009186) ENSSFOG00015009205 vbp1 (ENSSFOG00015033285) ENSSFOG00015032571 ENSSFOG00015009261 ENSSFOG00015009279 zgc:92429 (ENSSFOG00015009352) ENSSFOG00015009367 ENSSFOG00015009453 ENSSFOG00015009462 htr2cl1 (ENSSFOG00015009484) tnfsf10l (ENSSFOG00015009504) ENSSFOG00015009526 leap2 (ENSSFOG00015009548) PHKA1 (ENSSFOG00015009639) #21 hdac8 (ENSSFOG00015009809) #22 cited1 (ENSSFOG00015009837) ENSSFOG00015009888 #23 NHSL2 (ENSSFOG00015009968) ENSSFOG00015010005 ENSSFOG00015010036 rasl11a (ENSSFOG00015010080) gc2 (ENSSFOG00015010098) ENSSFOG00015033084 col4a5 (ENSSFOG00015010174) ENSSFOG00015010277 ankrd46b (ENSSFOG00015027965) ENSSFOG00015026578 mtm1 (ENSSFOG00015010467) cd99l2 (ENSSFOG00015029644) hmgb3a (ENSSFOG00015027690) P. kingsleyae MODERN SPECIES 56 ubl3b (ENSPKIG00000020851) ENSPKIG00000020834 vbp1 (ENSPKIG00000020808) rab39bb (ENSPKIG00000020795) ENSPKIG00000020628 zgc:92429 (ENSPKIG00000020424) ENSPKIG00000020406 ENSPKIG00000020286 ENSPKIG00000020242 htr2cl1 (ENSPKIG00000020223) ENSPKIG00000020194 ENSPKIG00000020179 ENSPKIG00000020173 leap2 (ENSPKIG00000020162) PHKA1 (ENSPKIG00000020043) #21 hdac8 (ENSPKIG00000019978) #22 cited1 (ENSPKIG00000019960) rps4x (ENSPKIG00000019937) #23 NHSL2 (ENSPKIG00000019921) ENSPKIG00000019910 Reedfish MODERN SPECIES 3 ENSECRG00000009358 ENSECRG00000009365 ENSECRG00000009375 ENSECRG00000009382 ERP27 (ENSECRG00000009390) ENSECRG00000009404 pde6ga (ENSECRG00000009420) ENSECRG00000009449 GPRC5D (ENSECRG00000009459) ENSECRG00000009474 ENSECRG00000009483 ENSECRG00000009494 ENSECRG00000009504 zdhhc15b (ENSECRG00000009527) #11 rps4x (ENSECRG00000009548) #23 hdac8 (ENSECRG00000009568) #22 ENSECRG00000009585 #26 fgf16 (ENSECRG00000009608) #25 uprt (ENSECRG00000009626) #9 abcb7 (ENSECRG00000009647) #8 NEXMIF (ENSECRG00000009672) ENSECRG00000009692 ENSECRG00000009700 zgc:109889 (ENSECRG00000009707) ENSECRG00000009719 ENSECRG00000009730 ankrd46b (ENSECRG00000009745) dacha (ENSECRG00000009802) ENSECRG00000010090 chm (ENSECRG00000010166) TMLHE (ENSECRG00000010408) Elephant shark MODERN SPECIES 1487 BRCC3 (ENSCMIG00000004180) ENSCMIG00000004175 fundc2 (ENSCMIG00000004171) ENSCMIG00000004126 ENSCMIG00000004100 cstf2 (ENSCMIG00000004095) trmt12 (ENSCMIG00000004088) ENSCMIG00000004086 SYTL4 (ENSCMIG00000004079) ENSCMIG00000004074 PRRG3 (ENSCMIG00000004070) ENSCMIG00000004069 pin4 (ENSCMIG00000004066) ENSCMIG00000004064 ENSCMIG00000003735 #21 hdac8 (ENSCMIG00000003634) #22 rps4x (ENSCMIG00000003554) #23 drp2 (ENSCMIG00000003511) xkrx (ENSCMIG00000003501) ENSCMIG00000003492 ENSCMIG00000003488 ENSCMIG00000003486 SLC25A53 (ENSCMIG00000003483) prps1a (ENSCMIG00000003391) FRMPD3 (ENSCMIG00000003344) ENSCMIG00000003333 ENSCMIG00000003331 cox11 (ENSCMIG00000003324) RBM41 (ENSCMIG00000003320) ENSCMIG00000003317 ENSCMIG00000003316 Cyclostomata ANCESTRAL SPECIES ENSGT00940000157843 #22 Hagfish MODERN SPECIES 1314 ENSEBUG00000010154 ENSEBUG00000009421 cfap298 (ENSEBUG00000012400) ENSEBUG00000007645 hdac8 (ENSEBUG00000006852) #22 OSCP1 (ENSEBUG00000011170) ENSEBUG00000007407 ENSEBUG00000004649 ENSEBUG00000009838 ENSEBUG00000009696 ENSEBUG00000006188 ENSEBUG00000012986 Lamprey MODERN SPECIES 1898 ENSPMAG00000008243 #22 Ciona ANCESTRAL SPECIES 1324 ENSGT00940000168132 ENSGT00940000157843 #22 Ciona savignyi MODERN SPECIES 74 ENSCSAVG00000004803 ENSCSAVG00000004804 ENSCSAVG00000004807 ENSCSAVG00000004811 ENSCSAVG00000004817 ENSCSAVG00000004987 ENSCSAVG00000004998 ENSCSAVG00000005002 ENSCSAVG00000005056 ENSCSAVG00000005058 ENSCSAVG00000005063 ENSCSAVG00000005189 ENSCSAVG00000005198 ENSCSAVG00000005243 ENSCSAVG00000005374 ENSCSAVG00000005379 #22 ENSCSAVG00000005383 ENSCSAVG00000005384 ENSCSAVG00000005388 ENSCSAVG00000005389 ENSCSAVG00000005400 ENSCSAVG00000005405 ENSCSAVG00000005408 ENSCSAVG00000005411 ENSCSAVG00000005413 ENSCSAVG00000005417 ENSCSAVG00000006062 ENSCSAVG00000006066 ENSCSAVG00000006104 ENSCSAVG00000006119 ENSCSAVG00000006124 Ciona intestinalis MODERN SPECIES 74 ENSCING00000023381 ENSCING00000007044 ENSCING00000007045 ENSCING00000015007 ENSCING00000007021 ENSCING00000022904 ENSCING00000002648 ENSCING00000018498 ENSCING00000015282 ENSCING00000018266 ENSCING00000005195 ENSCING00000015289 ENSCING00000005273 ENSCING00000005283 pitx (ENSCING00000005285) ENSCING00000015298 #22 ENSCING00000005288 ENSCING00000017149 ENSCING00000005304 ENSCING00000023337 ENSCING00000015335 ENSCING00000003180 ENSCING00000018342 ENSCING00000015337 ENSCING00000017592 ENSCING00000024923 ENSCING00000015355 ENSCING00000003163 ENSCING00000022859 ENSCING00000003156 ENSCING00000015365