Amniota ANCESTRAL SPECIES 48 ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 Mammalia ANCESTRAL SPECIES 54 ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000153313.C.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x #24 ENSGT00390000005569.w.a ##24 ENSGT00950000182963.b.b #26 ENSGT00510000047029 ENSGT00940000156837 #25 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000165959 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Theria ANCESTRAL SPECIES 33 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000153313.C.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x #24 ENSGT00390000005569.w.a ##24 ENSGT00950000182963.b.b #26 ENSGT00510000047029 ENSGT00940000156837 #25 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Eutheria ANCESTRAL SPECIES 16 ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b #24 ENSGT00390000005569.x.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Primates ANCESTRAL SPECIES 19 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g #28 ENSGT00390000015252.h ##28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Catarrhini ANCESTRAL SPECIES 12 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400.e ENSGT00940000165171 ENSGT00410000029400.f ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00530000063666.a.m.a.a.b #14 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400.e ENSGT00410000029400.f ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Vervet Monkey MODERN SPECIES 203 ZDHHC15 (ENSCSAG00000010880) #7 UPRT (ENSCSAG00000010895) #8 ABCB7 (ENSCSAG00000010981) #9 NEXMIF (ENSCSAG00000011002) #10 RLIM (ENSCSAG00000011014) #11 SLC16A2 (ENSCSAG00000011031) #12 ZCCHC13 (ENSCSAG00000000095) #13 ENSCSAG00000000097 #14 ENSCSAG00000011040 #15 CHIC1 (ENSCSAG00000011042) #16 CDX4 (ENSCSAG00000011047) #17 NAP1L2 (ENSCSAG00000000099) #18 ENSCSAG00000000102 #19 ENSCSAG00000011069 #20 PHKA1 (ENSCSAG00000011091) #21 HDAC8 (ENSCSAG00000011100) #22 CITED1 (ENSCSAG00000011106) #23 ENSCSAG00000011155 #24 ERCC6L (ENSCSAG00000011173) #25 NHSL2 (ENSCSAG00000011202) #26 RTL5 (ENSCSAG00000000104) #27 ENSCSAG00000011207 #28 ENSCSAG00000011211 #29 CXCR3 (ENSCSAG00000011214) #30 OGT (ENSCSAG00000011228) #31 ENSCSAG00000011236 #32 TAF1 (ENSCSAG00000011320) #33 ITGB1BP2 (ENSCSAG00000011356) #34 ENSCSAG00000011364 #35 ENSCSAG00000011368 #36 ZMYM3 (ENSCSAG00000011407) #37 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000156281.i #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Macaca ANCESTRAL SPECIES 13 ENSGT00940000158214 #7 ENSGT00940000155266.lb ENSGT01020000230412.D #8 ENSGT00940000156281.i #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Pig-tailed macaque MODERN SPECIES 337 ENSMNEG00000037004 #20 ENSMNEG00000029054 ENSMNEG00000004008 ENSMNEG00000036085 PHKA1 (ENSMNEG00000038795) #21 HDAC8 (ENSMNEG00000033648) #22 CITED1 (ENSMNEG00000032803) #23 ENSMNEG00000012820 #24 ERCC6L (ENSMNEG00000030867) #25 ENSMNEG00000033596 RTL5 (ENSMNEG00000037520) #27 NHSL2 (ENSMNEG00000040254) #26 Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000154465.C.p ENSGT00940000158214 #7 ENSGT00940000155266.lb ENSGT01020000230412.D #8 ENSGT00940000156281.i #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m #33 Rhesus MODERN SPECIES 327 ENSMMUG00000010418 ZCCHC13 (ENSMMUG00000053524) #13 ENSMMUG00000064792 ENSMMUG00000063858 ENSMMUG00000051178 CHIC1 (ENSMMUG00000023236) #16 CDX4 (ENSMMUG00000013449) #17 NAP1L2 (ENSMMUG00000004793) #18 ENSMMUG00000009740 #19 ENSMMUG00000039929 #19 ENSMMUG00000053182 ENSMMUG00000059926 ENSMMUG00000057710 ENSMMUG00000055457 PHKA1 (ENSMMUG00000007593) #21 CITED1 (ENSMMUG00000003296) #22 RPS4X (ENSMMUG00000003295) ##24 ERCC6L (ENSMMUG00000012957) #25 PIN4 (ENSMMUG00000055786) RTL5 (ENSMMUG00000059483) #27 NHSL2 (ENSMMUG00000021924) #26 ENSMMUG00000014885 ##28 ENSMMUG00000017783 #29 CXCR3 (ENSMMUG00000032424) #30 GCNA (ENSMMUG00000011469) OGT (ENSMMUG00000015238) #31 ENSMMUG00000056450 ENSMMUG00000048382 TAF1 (ENSMMUG00000005663) #33 ENSMMUG00000054587 ITGB1BP2 (ENSMMUG00000020479) #34 Crab-eating macaque MODERN SPECIES 175 CHIC1 (ENSMFAG00000011399) #16 ENSMFAG00000044694 ENSMFAG00000057332 ENSMFAG00000057045 CDX4 (ENSMFAG00000053268) #17 NAP1L2 (ENSMFAG00000003271) #18 ENSMFAG00000062023 #19 ENSMFAG00000062898 #19 ENSMFAG00000054792 ENSMFAG00000048150 ENSMFAG00000034324 ENSMFAG00000051621 ENSMFAG00000039331 #20 ENSMFAG00000007994 PHKA1 (ENSMFAG00000038543) #21 HDAC8 (ENSMFAG00000003160) #22 ENSMFAG00000038135 #24 ERCC6L (ENSMFAG00000045509) #25 PIN4 (ENSMFAG00000043832) NHSL2 (ENSMFAG00000033144) #26 ENSMFAG00000031405 #28 ENSMFAG00000000394 ##28 ENSMFAG00000044396 #29 CXCR3 (ENSMFAG00000031295) #30 GCNA (ENSMFAG00000046224) OGT (ENSMFAG00000001803) #31 ENSMFAG00000036860 ENSMFAG00000054759 ENSMFAG00000031355 ENSMFAG00000060403 ENSMFAG00000047652 Cercopithecinae_b ANCESTRAL SPECIES 46 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000160311 #19 ENSGT00410000029400.f ENSGT00940000163063 #20 ENSGT00410000029400.e ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00940000154606.`c.b Olive baboon MODERN SPECIES 792 ENSPANG00000030463 ABCB7 (ENSPANG00000026346) #9 UPRT (ENSPANG00000017665) #8 ENSPANG00000001066 ZDHHC15 (ENSPANG00000019929) #7 ENSPANG00000038963 MAGEE2 (ENSPANG00000005315) ENSPANG00000013474 ENSPANG00000041868 CDX4 (ENSPANG00000044820) #17 ENSPANG00000011549 #19 ENSPANG00000035979 ENSPANG00000048671 ENSPANG00000046739 #20 PHKA1 (ENSPANG00000014929) #21 HDAC8 (ENSPANG00000006122) #22 ENSPANG00000038920 ##24 ENSPANG00000043866 FGF16 (ENSPANG00000002965) ATRX (ENSPANG00000024984) MAGT1 (ENSPANG00000012904) ENSPANG00000008508 ATP7A (ENSPANG00000019286) ENSPANG00000011695 TAF9B (ENSPANG00000006121) ENSPANG00000051297 ENSPANG00000041600 ENSPANG00000038489 LPAR4 (ENSPANG00000014311) P2RY10 (ENSPANG00000010847) ENSPANG00000043750 Cercopithecinae_d ANCESTRAL SPECIES 207 ENSGT00940000163063 #20 ENSGT00410000029400.f ENSGT00410000029400.e ENSGT00940000160311 #19 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 Sooty mangabey MODERN SPECIES 412 ENSCATG00000043214 PHKA1 (ENSCATG00000033409) #21 HDAC8 (ENSCATG00000031035) #22 CITED1 (ENSCATG00000036514) #23 ENSCATG00000029683 ##24 ENSCATG00000032170 ERCC6L (ENSCATG00000038031) #25 NHSL2 (ENSCATG00000029367) #26 RTL5 (ENSCATG00000043303) #27 Drill MODERN SPECIES 1261 GOLIM4 (ENSMLEG00000032160) ENSMLEG00000034698 ENSMLEG00000034654 ENSMLEG00000034097 ENSMLEG00000022728 WDR49 (ENSMLEG00000033324) SERPINI2 (ENSMLEG00000029650) ZBBX (ENSMLEG00000012570) ENSMLEG00000030656 ENSMLEG00000027299 ENSMLEG00000030049 PHKA1 (ENSMLEG00000035533) #21 HDAC8 (ENSMLEG00000031268) #22 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 486 ENSGT00940000157843.g #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029.z.e.e.a ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 Golden snub-nosed monkey MODERN SPECIES 1818 HDAC8 (ENSRROG00000045442) #22 CITED1 (ENSRROG00000023044) #23 ENSRROG00000037958 ##24 ERCC6L (ENSRROG00000042561) #25 ENSRROG00000017904 RTL5 (ENSRROG00000003440) #27 NHSL2 (ENSRROG00000017791) #26 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 694 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00410000029400.e ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.h.a #22 Golden snub-nosed monkey MODERN SPECIES 966 ENSRROG00000030432 #22 Black snub-nosed monkey MODERN SPECIES 274 ENSRBIG00000031391 #21 ENSRBIG00000033697 #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000157843.h.b #22 Black snub-nosed monkey MODERN SPECIES 1503 ENSRBIG00000037379 #22 Hominoidea ANCESTRAL SPECIES 16 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.g.b ##28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.g.b ##28 ENSGT00390000015252.h ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000163063 #20 ENSGT00940000165171 ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.g.b ##28 ENSGT00390000015252.h.a ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000165171.a ENSGT00940000165171.b ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.g.a.a #28 ENSGT00390000015252.h.a ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Pan ANCESTRAL SPECIES 6 ENSGT00940000156154.b ENSGT00940000158214 #7 ENSGT00940000155268.f.b.a.a.a ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.g #11 ENSGT00940000159450 #12 ENSGT00910000146883.A ENSGT00390000003601.a #16 ENSGT00940000154744.m.a ENSGT00940000162554 #17 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.h.a ##28 ENSGT00390000015252.g.a.b #29 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m #33 Bonobo MODERN SPECIES 369 UPRT (ENSPPAG00000035587) #8 ABCB7 (ENSPPAG00000031273) #9 NEXMIF (ENSPPAG00000015470) #10 RLIM (ENSPPAG00000027958) #11 SLC16A2 (ENSPPAG00000038613) #12 ENSPPAG00000030864 ENSPPAG00000029442 ENSPPAG00000009768 CHIC1 (ENSPPAG00000038543) #16 ENSPPAG00000038434 CDX4 (ENSPPAG00000036922) #17 ENSPPAG00000035410 ENSPPAG00000012920 #19 ENSPPAG00000042207 PHKA1 (ENSPPAG00000042021) #21 HDAC8 (ENSPPAG00000023056) #22 CITED1 (ENSPPAG00000037425) #23 ENSPPAG00000039737 ##24 ERCC6L (ENSPPAG00000031861) #25 PIN4 (ENSPPAG00000035593) ENSPPAG00000026409 #27 NHSL2 (ENSPPAG00000037776) #26 ENSPPAG00000030502 ##28 ENSPPAG00000029254 #29 CXCR3 (ENSPPAG00000042300) #30 ENSPPAG00000041492 OGT (ENSPPAG00000030832) #31 ENSPPAG00000027775 ENSPPAG00000017119 ENSPPAG00000039421 TAF1 (ENSPPAG00000009193) #33 Chimpanzee MODERN SPECIES 972 RLIM (ENSPTRG00000022037) #11 SLC16A2 (ENSPTRG00000022036) #12 ENSPTRG00000052595 ENSPTRG00000047834 ENSPTRG00000049646 ENSPTRG00000049815 CHIC1 (ENSPTRG00000028250) #16 ENSPTRG00000051207 CDX4 (ENSPTRG00000022032) #17 ENSPTRG00000043791 ENSPTRG00000028252 #19 ENSPTRG00000050068 ENSPTRG00000048543 ENSPTRG00000045935 PHKA1 (ENSPTRG00000022029) #21 HDAC8 (ENSPTRG00000051531) #22 CITED1 (ENSPTRG00000022026) #23 RPS4X (ENSPTRG00000022025) ##24 ERCC6L (ENSPTRG00000022023) #25 PIN4 (ENSPTRG00000049495) RTL5 (ENSPTRG00000039375) #27 NHSL2 (ENSPTRG00000028255) #26 ENSPTRG00000050221 ##28 ENSPTRG00000044432 #28 ENSPTRG00000046702 ##28 ENSPTRG00000047794 #29 CXCR3 (ENSPTRG00000022018) #30 GCNA (ENSPTRG00000022017) OGT (ENSPTRG00000049301) #31 ENSPTRG00000045772 ENSPTRG00000044195 Human MODERN SPECIES 1827 RLIM (ENSG00000131263) #11 SLC16A2 (ENSG00000147100) #12 ZCCHC13 (ENSG00000187969) #13 CHIC1 (ENSG00000204116) #16 CDX4 (ENSG00000131264) #17 NAP1L2 (ENSG00000186462) #18 PABPC1L2A (ENSG00000186288) #19 PABPC1L2B (ENSG00000184388) #19 FAM236A (ENSG00000275520) FAM236C (ENSG00000283594) DMRTC1 (ENSG00000269502) FAM236D (ENSG00000225396) FAM236B (ENSG00000268994) DMRTC1B (ENSG00000184911) PHKA1 (ENSG00000067177) #21 HDAC8 (ENSG00000147099) #22 ENSG00000285547 CITED1 (ENSG00000125931) #23 RPS4X (ENSG00000198034) #24 ERCC6L (ENSG00000186871) #25 PIN4 (ENSG00000102309) RTL5 (ENSG00000242732) #27 NHSL2 (ENSG00000204131) #26 CXorf49B (ENSG00000215113) #28 CXorf49 (ENSG00000215115) #28 ENSG00000283599 ##28 CXCR3 (ENSG00000186810) #30 GCNA (ENSG00000147174) OGT (ENSG00000147162) #31 TAF1 (ENSG00000147133) #33 ITGB1BP2 (ENSG00000147166) #34 Gorilla MODERN SPECIES 523 ENSGGOG00000043038 ENSGGOG00000006280 CHIC1 (ENSGGOG00000010930) #16 ENSGGOG00000037536 CDX4 (ENSGGOG00000005465) #17 ENSGGOG00000041141 NAP1L2 (ENSGGOG00000026343) #18 ENSGGOG00000043933 #19 ENSGGOG00000038606 #19 ENSGGOG00000013219 #20 ENSGGOG00000026191 ENSGGOG00000001463 ENSGGOG00000039205 ENSGGOG00000024429 PHKA1 (ENSGGOG00000006781) #21 HDAC8 (ENSGGOG00000011587) #22 CITED1 (ENSGGOG00000000290) #23 ENSGGOG00000023079 ##24 ERCC6L (ENSGGOG00000022367) #25 PIN4 (ENSGGOG00000016008) RTL5 (ENSGGOG00000037617) #27 NHSL2 (ENSGGOG00000012481) #26 ENSGGOG00000039791 ##28 ENSGGOG00000026973 ##28 ENSGGOG00000039521 #29 CXCR3 (ENSGGOG00000014881) #30 ENSGGOG00000014876 OGT (ENSGGOG00000014867) #31 ENSGGOG00000036906 ENSGGOG00000039493 ENSGGOG00000039675 Orangutan MODERN SPECIES 242 ABCB7 (ENSPPYG00000020483) #9 NEXMIF (ENSPPYG00000020482) #10 RLIM (ENSPPYG00000020481) #11 SLC16A2 (ENSPPYG00000020479) #12 ENSPPYG00000040239 ZCCHC13 (ENSPPYG00000020478) #13 ENSPPYG00000020475 CHIC1 (ENSPPYG00000020473) #16 CDX4 (ENSPPYG00000020472) #17 NAP1L2 (ENSPPYG00000020470) #18 ENSPPYG00000020468 #19 ENSPPYG00000030199 ENSPPYG00000020466 ENSPPYG00000030578 PHKA1 (ENSPPYG00000020465) #21 HDAC8 (ENSPPYG00000020464) #22 CITED1 (ENSPPYG00000032934) #23 RPS4X (ENSPPYG00000020462) #24 ERCC6L (ENSPPYG00000020461) #25 PIN4 (ENSPPYG00000020460) RTL5 (ENSPPYG00000041447) #27 NHSL2 (ENSPPYG00000020459) #26 ENSPPYG00000035100 #28 ENSPPYG00000035498 ##28 ENSPPYG00000020909 #29 CXCR3 (ENSPPYG00000020458) #30 GCNA (ENSPPYG00000020457) OGT (ENSPPYG00000020456) #31 TAF1 (ENSPPYG00000020453) #33 ITGB1BP2 (ENSPPYG00000020452) #34 NONO (ENSPPYG00000020451) #35 Gibbon MODERN SPECIES 449 ABCB7 (ENSNLEG00000001065) #9 NEXMIF (ENSNLEG00000001059) #10 RLIM (ENSNLEG00000001050) #11 ENSNLEG00000001044 #12 ENSNLEG00000030978 CHIC1 (ENSNLEG00000033690) #16 ENSNLEG00000034883 CDX4 (ENSNLEG00000001025) #17 NAP1L2 (ENSNLEG00000019044) #18 ENSNLEG00000018128 #19 ENSNLEG00000029617 #20 ENSNLEG00000034046 ENSNLEG00000029049 ENSNLEG00000018125 PHKA1 (ENSNLEG00000018124) #21 HDAC8 (ENSNLEG00000018123) #22 CITED1 (ENSNLEG00000018122) #23 ENSNLEG00000018121 ##24 ERCC6L (ENSNLEG00000036284) #25 PIN4 (ENSNLEG00000036320) ENSNLEG00000018852 RTL5 (ENSNLEG00000018851) #27 NHSL2 (ENSNLEG00000018118) #26 ENSNLEG00000001121 #28 ENSNLEG00000029115 ##28 CXCR3 (ENSNLEG00000001116) #30 ENSNLEG00000036058 OGT (ENSNLEG00000001038) #31 ENSNLEG00000032518 ENSNLEG00000030598 TAF1 (ENSNLEG00000000934) #33 Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000165171 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00390000015252.h ##28 ENSGT00390000015252.g #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Cebidae ANCESTRAL SPECIES 18 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333.s.a ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000165171 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 ENSGT00390000015252.h ##28 ENSGT00390000015252.g #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Cebidae_a ANCESTRAL SPECIES 143 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z.d.a ENSGT00950000182963.b.b #26 Bolivian squirrel monkey MODERN SPECIES 255 PHKA1 (ENSSBOG00000025021) #21 HDAC8 (ENSSBOG00000025932) #22 ENSSBOG00000004798 CITED1 (ENSSBOG00000016010) #23 ENSSBOG00000024943 ##24 PIN4 (ENSSBOG00000026467) ERCC6L (ENSSBOG00000029416) #25 NHSL2 (ENSSBOG00000024555) #26 ENSSBOG00000028108 ENSSBOG00000029281 ENSSBOG00000030907 ##28 Capuchin MODERN SPECIES 644 HDAC8 (ENSCCAG00000026098) #22 CITED1 (ENSCCAG00000035860) #23 RPS4X (ENSCCAG00000026154) #24 ERCC6L (ENSCCAG00000023790) #25 ENSCCAG00000018203 NHSL2 (ENSCCAG00000029553) #26 Marmoset MODERN SPECIES 78 ENSCJAG00000067434 ENSCJAG00000044335 CHIC1 (ENSCJAG00000016436) #16 CDX4 (ENSCJAG00000011367) #17 ENSCJAG00000070896 ENSCJAG00000073630 ENSCJAG00000071801 #19 ENSCJAG00000084463 #19 ENSCJAG00000074437 ENSCJAG00000081881 ENSCJAG00000073913 ENSCJAG00000069950 ENSCJAG00000079778 ENSCJAG00000000229 #20 PHKA1 (ENSCJAG00000004244) #21 HDAC8 (ENSCJAG00000004217) #22 ENSCJAG00000081431 ENSCJAG00000058709 CITED1 (ENSCJAG00000004200) #23 RPS4X (ENSCJAG00000004192) #24 ERCC6L (ENSCJAG00000022332) #25 ENSCJAG00000074350 ENSCJAG00000004992 RTL5 (ENSCJAG00000064303) #27 NHSL2 (ENSCJAG00000005012) #26 ENSCJAG00000084928 ENSCJAG00000086496 ##28 ENSCJAG00000032034 ##28 ENSCJAG00000032793 #28 CXCR3 (ENSCJAG00000006395) #30 ENSCJAG00000031514 Mas night monkey MODERN SPECIES 1018 ENSANAG00000024569 ENSANAG00000032031 PHKA1 (ENSANAG00000023223) #21 ENSANAG00000024193 HDAC8 (ENSANAG00000030857) #22 CITED1 (ENSANAG00000022811) #23 ENSANAG00000026660 #24 PIN4 (ENSANAG00000030057) ERCC6L (ENSANAG00000022378) #25 NHSL2 (ENSANAG00000027692) #26 CXCR3 (ENSANAG00000029785) #30 ENSANAG00000003202 Tarsier MODERN SPECIES 6703 ENSTSYG00000037163 HDAC8 (ENSTSYG00000009589) #22 CITED1 (ENSTSYG00000002080) #23 RPS4X (ENSTSYG00000003137) ##24 ERCC6L (ENSTSYG00000013701) #25 ENSTSYG00000035103 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311.g.b #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Lemuriformes ANCESTRAL SPECIES 49 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311.g.b #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.z ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 Mouse lemur MODERN SPECIES 169 UPRT (ENSMICG00000001079) #8 ENSMICG00000014514 #9 NEXMIF (ENSMICG00000028218) #10 RLIM (ENSMICG00000017508) #11 SLC16A2 (ENSMICG00000043965) #12 CHIC1 (ENSMICG00000026372) #16 ENSMICG00000032913 CDX4 (ENSMICG00000011271) #17 ENSMICG00000047642 #19 ENSMICG00000042715 #20 ENSMICG00000043211 ENSMICG00000047883 PHKA1 (ENSMICG00000007902) #21 ENSMICG00000031459 ENSMICG00000028991 HDAC8 (ENSMICG00000007893) #22 CITED1 (ENSMICG00000016613) #23 ENSMICG00000016606 ##24 ERCC6L (ENSMICG00000035415) #25 ENSMICG00000001640 NHSL2 (ENSMICG00000008280) #26 ENSMICG00000038295 CXCR3 (ENSMICG00000038479) #30 OGT (ENSMICG00000003078) #31 ENSMICG00000017461 #33 ENSMICG00000042674 ITGB1BP2 (ENSMICG00000000235) #34 NONO (ENSMICG00000000232) #35 ZMYM3 (ENSMICG00000014095) #37 GJB1 (ENSMICG00000014093) NLGN3 (ENSMICG00000014073) Lemuriformes_a ANCESTRAL SPECIES 95 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Greater bamboo lemur MODERN SPECIES 961 PHKA1 (ENSPSMG00000001521) #21 HDAC8 (ENSPSMG00000002315) #22 ENSPSMG00000002985 ENSPSMG00000002988 Coquerels sifaka MODERN SPECIES 56 PHKA1 (ENSPCOG00000019881) #21 HDAC8 (ENSPCOG00000008094) #22 CITED1 (ENSPCOG00000013588) #23 RPS4X (ENSPCOG00000027468) #24 ERCC6L (ENSPCOG00000024286) #25 NHSL2 (ENSPCOG00000021201) #26 CXCR3 (ENSPCOG00000022834) #30 OGT (ENSPCOG00000017367) #31 ENSPCOG00000007901 #33 ENSPCOG00000024110 ITGB1BP2 (ENSPCOG00000020946) #34 NONO (ENSPCOG00000008197) #35 ZMYM3 (ENSPCOG00000022189) #37 GJB1 (ENSPCOG00000009326) NLGN3 (ENSPCOG00000015168) MED12 (ENSPCOG00000023218) IL2RG (ENSPCOG00000022304) Bushbaby MODERN SPECIES 410 PHKA1 (ENSOGAG00000016652) #21 ENSOGAG00000030470 HDAC8 (ENSOGAG00000011814) #22 CITED1 (ENSOGAG00000011810) #23 ENSOGAG00000011808 ##24 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Glires ANCESTRAL SPECIES 10 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764.a ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Rodentia ANCESTRAL SPECIES 10 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764.a ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea ANCESTRAL SPECIES 50 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT00390000015252.c.a.b #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.c.a.a #28 ENSGT00390000015252.c.a.b #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000156489.m ENSGT00940000168699 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Golden Hamster MODERN SPECIES 727 Dmrtc1b (ENSMAUG00000010338) #20 ENSMAUG00000008738 #21 Hdac8 (ENSMAUG00000006310) #22 Cited1 (ENSMAUG00000020556) #23 Rps4x (ENSMAUG00000013223) ##24 Pin4 (ENSMAUG00000015251) Rtl5 (ENSMAUG00000009321) #27 Nhsl2 (ENSMAUG00000013469) #26 ENSMAUG00000007111 Cxcr3 (ENSMAUG00000006658) #30 ENSMAUG00000015275 #31 ENSMAUG00000010446 #31 Taf1 (ENSMAUG00000018664) #33 Itgb1bp2 (ENSMAUG00000007311) #34 Nono (ENSMAUG00000016243) #35 Zmym3 (ENSMAUG00000015148) #37 Gjb1 (ENSMAUG00000011973) Nlgn3 (ENSMAUG00000004367) Chinese hamster chok1gshd MODERN SPECIES 16 Zcchc13 (ENSCGRG00001009786) #13 ENSCGRG00001004584 Tsx (ENSCGRG00001005790) Chic1 (ENSCGRG00001011931) #16 ENSCGRG00001012274 Cdx4 (ENSCGRG00001020397) #17 ENSCGRG00001012385 ENSCGRG00001007129 ENSCGRG00001015812 Eif2s3y (ENSCGRG00001016219) Nap1l2 (ENSCGRG00001003632) #18 ENSCGRG00001023387 #19 Dmrtc1a (ENSCGRG00001018624) ENSCGRG00001024855 Phka1 (ENSCGRG00001020129) #21 Hdac8 (ENSCGRG00001022455) #22 Cited1 (ENSCGRG00001022122) #23 Rps4x (ENSCGRG00001018159) #24 Ercc6l (ENSCGRG00001016668) #25 Pin4 (ENSCGRG00001023057) Nhsl2 (ENSCGRG00001018292) #26 Rtl5 (ENSCGRG00001010452) #27 ENSCGRG00001012656 Cxcr3 (ENSCGRG00001013701) #30 ENSCGRG00001014167 Ogt (ENSCGRG00001011594) #31 8030474K03Rik (ENSCGRG00001022034) #28 Gm4779 (ENSCGRG00001010077) #28 Cricetidae_B ANCESTRAL SPECIES 54 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.c.a.a #28 ENSGT00390000015252.c.a.b #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Prairie vole MODERN SPECIES 360 ENSMOCG00000007642 Atp11c (ENSMOCG00000002605) ENSMOCG00000012975 Gm7073 (ENSMOCG00000018667) Sox3 (ENSMOCG00000009062) ENSMOCG00000013955 Ldoc1 (ENSMOCG00000008324) ENSMOCG00000006967 Magec2 (ENSMOCG00000016294) ENSMOCG00000017215 Slitrk4 (ENSMOCG00000008180) ENSMOCG00000014952 Ctag2 (ENSMOCG00000017014) ENSMOCG00000015005 Phka1 (ENSMOCG00000013482) #21 Hdac8 (ENSMOCG00000019902) #22 Cited1 (ENSMOCG00000013938) #23 ENSMOCG00000014451 ##24 Ercc6l (ENSMOCG00000021344) #25 ENSMOCG00000000929 Nhsl2 (ENSMOCG00000002880) #26 Rtl5 (ENSMOCG00000000142) #27 Cxcr3 (ENSMOCG00000007041) #30 Ogt (ENSMOCG00000013563) #31 Taf1 (ENSMOCG00000001297) #33 Itgb1bp2 (ENSMOCG00000021266) #34 ENSMOCG00000005532 #35 Zmym3 (ENSMOCG00000007682) #37 Gjb1 (ENSMOCG00000009230) Nlgn3 (ENSMOCG00000015847) Med12 (ENSMOCG00000013807) Northern American deer mouse MODERN SPECIES 475 Zcchc13 (ENSPEMG00000030313) #13 ENSPEMG00000028568 Tsx (ENSPEMG00000008527) Chic1 (ENSPEMG00000030446) #16 Cdx4 (ENSPEMG00000022957) #17 ENSPEMG00000031031 ENSPEMG00000028389 ENSPEMG00000029441 #19 ENSPEMG00000026745 #19 Dmrtc1a (ENSPEMG00000009870) 1700031F05Rik (ENSPEMG00000019008) Dmrtc1b (ENSPEMG00000013412) #20 ENSPEMG00000016284 ENSPEMG00000014842 Phka1 (ENSPEMG00000007806) #21 Hdac8 (ENSPEMG00000013611) #22 ENSPEMG00000029011 Cited1 (ENSPEMG00000004332) #23 ENSPEMG00000016482 ##24 Ercc6l (ENSPEMG00000007920) #25 Pin4 (ENSPEMG00000009326) Nhsl2 (ENSPEMG00000006950) #26 Rtl5 (ENSPEMG00000028195) #27 8030474K03Rik (ENSPEMG00000028164) #28 Gm4779 (ENSPEMG00000015753) #28 Cxcr3 (ENSPEMG00000018113) #30 Ogt (ENSPEMG00000012399) #31 Taf1 (ENSPEMG00000011524) #33 ENSPEMG00000029064 Itgb1bp2 (ENSPEMG00000004183) #34 Nono (ENSPEMG00000011150) #35 Murinae ANCESTRAL SPECIES 14 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Mus ANCESTRAL SPECIES 9 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Mus_A ANCESTRAL SPECIES 15 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Mus_B ANCESTRAL SPECIES 14 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT00390000015252.c.a.b #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 Mouse MODERN SPECIES 37 Gm26992 (ENSMUSG00000098078) Tsx (ENSMUSG00000031329) Chic1 (ENSMUSG00000031327) #16 Cdx4 (ENSMUSG00000031326) #17 Nap1l2 (ENSMUSG00000082229) #18 1700018G05Rik (ENSMUSG00000109745) 1700011M02Rik (ENSMUSG00000079476) Dmrtc1a (ENSMUSG00000031323) 1700031F05Rik (ENSMUSG00000032894) Dmrtc1c2 (ENSMUSG00000067561) Dmrtc1c1 (ENSMUSG00000067562) Dmrtc1b (ENSMUSG00000073027) #20 Gm9112 (ENSMUSG00000079479) Gm3880 (ENSMUSG00000081443) Phka1 (ENSMUSG00000034055) #21 Hdac8 (ENSMUSG00000067567) #22 Cited1 (ENSMUSG00000051159) #23 Rps4x (ENSMUSG00000031320) ##24 Ercc6l (ENSMUSG00000051220) #25 Pin4 (ENSMUSG00000079480) Rtl5 (ENSMUSG00000049191) #27 Nhsl2 (ENSMUSG00000079481) #26 Gm3858 (ENSMUSG00000118638) #28 8030474K03Rik (ENSMUSG00000046774) #28 Gm4779 (ENSMUSG00000045010) #28 Cxcr3 (ENSMUSG00000050232) #30 Ogt (ENSMUSG00000034160) #31 Taf1 (ENSMUSG00000031314) #33 Itgb1bp2 (ENSMUSG00000031312) #34 Nono (ENSMUSG00000031311) #35 Zmym3 (ENSMUSG00000031310) #37 Mus_C ANCESTRAL SPECIES 22 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00410000029400 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.d #28 ENSGT00390000015252.c.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a spretus MODERN SPECIES 19 Abcb7 (MGP_SPRETEiJ_G0034479) #9 Nexmif (MGP_SPRETEiJ_G0034478) #10 Rlim (MGP_SPRETEiJ_G0034477) #11 Slc16a2 (MGP_SPRETEiJ_G0034476) #12 Zcchc13 (MGP_SPRETEiJ_G0034475) #13 MGP_SPRETEiJ_G0034474 Tsx (MGP_SPRETEiJ_G0034473) Chic1 (MGP_SPRETEiJ_G0034472) #16 Cdx4 (MGP_SPRETEiJ_G0034471) #17 Nap1l2 (MGP_SPRETEiJ_G0034470) #18 MGP_SPRETEiJ_G0034469 Dmrtc1a (MGP_SPRETEiJ_G0034468) MGP_SPRETEiJ_G0034467 MGP_SPRETEiJ_G0034466 Phka1 (MGP_SPRETEiJ_G0034465) #21 Hdac8 (MGP_SPRETEiJ_G0034464) #22 Cited1 (MGP_SPRETEiJ_G0034463) #23 MGP_SPRETEiJ_G0034462 #24 Ercc6l (MGP_SPRETEiJ_G0034461) #25 Pin4 (MGP_SPRETEiJ_G0034460) Rtl5 (MGP_SPRETEiJ_G0034459) #27 Nhsl2 (MGP_SPRETEiJ_G0034458) #26 8030474K03Rik (MGP_SPRETEiJ_G0034457) #28 Cxcr3 (MGP_SPRETEiJ_G0034456) #30 Ogt (MGP_SPRETEiJ_G0034455) #31 Taf1 (MGP_SPRETEiJ_G0034454) #33 Itgb1bp2 (MGP_SPRETEiJ_G0034453) #34 Zmym3 (MGP_SPRETEiJ_G0034451) #37 Gjb1 (MGP_SPRETEiJ_G0034450) Nlgn3 (MGP_SPRETEiJ_G0034449) Med12 (MGP_SPRETEiJ_G0034448) Steppe mouse MODERN SPECIES 3385 ENSMSIG00000008475 #21 Hdac8 (ENSMSIG00000024883) #22 Ryukyu mouse MODERN SPECIES 19 Uprt (MGP_CAROLIEiJ_G0033316) #8 Abcb7 (MGP_CAROLIEiJ_G0033315) #9 Nexmif (MGP_CAROLIEiJ_G0033314) #10 Slc16a2 (MGP_CAROLIEiJ_G0033312) #12 Zcchc13 (MGP_CAROLIEiJ_G0033311) #13 MGP_CAROLIEiJ_G0033310 Tsx (MGP_CAROLIEiJ_G0033309) Chic1 (MGP_CAROLIEiJ_G0033308) #16 Cdx4 (MGP_CAROLIEiJ_G0033307) #17 Nap1l2 (MGP_CAROLIEiJ_G0033306) #18 MGP_CAROLIEiJ_G0033305 Dmrtc1a (MGP_CAROLIEiJ_G0033304) MGP_CAROLIEiJ_G0033303 MGP_CAROLIEiJ_G0033302 Phka1 (MGP_CAROLIEiJ_G0033301) #21 Hdac8 (MGP_CAROLIEiJ_G0033300) #22 Cited1 (MGP_CAROLIEiJ_G0033299) #23 Rps4x (MGP_CAROLIEiJ_G0033298) ##24 Ercc6l (MGP_CAROLIEiJ_G0033297) #25 MGP_CAROLIEiJ_G0033296 Rtl5 (MGP_CAROLIEiJ_G0033295) #27 Nhsl2 (MGP_CAROLIEiJ_G0033294) #26 MGP_CAROLIEiJ_G0033293 #28 Cxcr3 (MGP_CAROLIEiJ_G0033292) #30 Ogt (MGP_CAROLIEiJ_G0033291) #31 Taf1 (MGP_CAROLIEiJ_G0033290) #33 Itgb1bp2 (MGP_CAROLIEiJ_G0033289) #34 MGP_CAROLIEiJ_G0033288 #35 Zmym3 (MGP_CAROLIEiJ_G0033287) #37 Gjb1 (MGP_CAROLIEiJ_G0033286) Nlgn3 (MGP_CAROLIEiJ_G0033285) Shrew mouse MODERN SPECIES 23 Uprt (MGP_PahariEiJ_G0031853) #8 Abcb7 (MGP_PahariEiJ_G0031852) #9 Nexmif (MGP_PahariEiJ_G0031851) #10 Rlim (MGP_PahariEiJ_G0031850) #11 Slc16a2 (MGP_PahariEiJ_G0031849) #12 Zcchc13 (MGP_PahariEiJ_G0031848) #13 Tsx (MGP_PahariEiJ_G0031847) Chic1 (MGP_PahariEiJ_G0031846) #16 Cdx4 (MGP_PahariEiJ_G0031845) #17 Nap1l2 (MGP_PahariEiJ_G0031844) #18 Dmrtc1a (MGP_PahariEiJ_G0031843) MGP_PahariEiJ_G0031842 MGP_PahariEiJ_G0031841 MGP_PahariEiJ_G0031840 #20 Phka1 (MGP_PahariEiJ_G0031839) #21 Hdac8 (MGP_PahariEiJ_G0031838) #22 Cited1 (MGP_PahariEiJ_G0031837) #23 Rps4x (MGP_PahariEiJ_G0031836) ##24 Ercc6l (MGP_PahariEiJ_G0031835) #25 Pin4 (MGP_PahariEiJ_G0031834) Rtl5 (MGP_PahariEiJ_G0031833) #27 Nhsl2 (MGP_PahariEiJ_G0031832) #26 MGP_PahariEiJ_G0031831 #28 Cxcr3 (MGP_PahariEiJ_G0031830) #30 Ogt (MGP_PahariEiJ_G0031829) #31 MGP_PahariEiJ_G0031828 #33 Itgb1bp2 (MGP_PahariEiJ_G0031827) #34 Nono (MGP_PahariEiJ_G0031826) #35 Zmym3 (MGP_PahariEiJ_G0031825) #37 Gjb1 (MGP_PahariEiJ_G0031824) Nlgn3 (MGP_PahariEiJ_G0031823) Rat MODERN SPECIES 46 Cdx4 (ENSRNOG00000002974) #17 LOC100361671 (ENSRNOG00000003008) RGD1562521 (ENSRNOG00000003009) AABR07039336.2 (ENSRNOG00000003025) #18 AABR07039334.1 (ENSRNOG00000022267) #19 ENSRNOG00000064026 Fam236d (ENSRNOG00000069062) Dmrtc1b (ENSRNOG00000022286) #20 Dmrtc1c1 (ENSRNOG00000068646) LOC120099304 (ENSRNOG00000069736) ENSRNOG00000068588 ENSRNOG00000065493 AABR07039229.2 (ENSRNOG00000048295) LOC679960 (ENSRNOG00000003062) Phka1 (ENSRNOG00000003063) #21 Hdac8 (ENSRNOG00000003122) #22 Cited1 (ENSRNOG00000003189) #23 Rps4x (ENSRNOG00000003201) #24 Ercc6l (ENSRNOG00000003208) #25 Pin4 (ENSRNOG00000050051) Rtl5 (ENSRNOG00000045779) #27 Nhsl2 (ENSRNOG00000037951) #26 LOC102555994 (ENSRNOG00000060462) #28 Cxhxorf49 (ENSRNOG00000025211) #28 LOC102553785 (ENSRNOG00000025200) #28 Cxcr3 (ENSRNOG00000003305) #30 LOC102548506 (ENSRNOG00000066689) Ogt (ENSRNOG00000003359) #31 Taf1 (ENSRNOG00000002565) #33 Itgb1bp2 (ENSRNOG00000003596) #34 Nono (ENSRNOG00000003689) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1742 Dmrtc1b (ENSNGAG00000017712) #20 Phka1 (ENSNGAG00000018710) #21 Hdac8 (ENSNGAG00000000558) #22 Cited1 (ENSNGAG00000010654) #23 Rps4x (ENSNGAG00000011593) ##24 Ercc6l (ENSNGAG00000021063) #25 ENSNGAG00000000797 Nhsl2 (ENSNGAG00000006702) #26 Rtl5 (ENSNGAG00000014752) #27 Cxcr3 (ENSNGAG00000012996) #30 Ogt (ENSNGAG00000017957) #31 ENSNGAG00000013716 Taf1 (ENSNGAG00000019411) #33 Itgb1bp2 (ENSNGAG00000011479) #34 Nono (ENSNGAG00000010857) #35 Zmym3 (ENSNGAG00000016287) #37 Gjb1 (ENSNGAG00000008737) Nlgn3 (ENSNGAG00000011722) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 80 ENSJJAG00000013578 Chic1 (ENSJJAG00000022346) #16 ENSJJAG00000015455 #17 ENSJJAG00000007003 Nap1l2 (ENSJJAG00000005294) #18 ENSJJAG00000009723 ENSJJAG00000007037 #19 ENSJJAG00000017642 ENSJJAG00000020172 #20 Phka1 (ENSJJAG00000016074) #21 ENSJJAG00000013599 #22 Cited1 (ENSJJAG00000021265) #23 Rps4x (ENSJJAG00000018258) ##24 Ercc6l (ENSJJAG00000022875) #25 Pin4 (ENSJJAG00000022110) ENSJJAG00000023103 #17 ENSJJAG00000008830 Cxcr3 (ENSJJAG00000024149) #30 ENSJJAG00000020751 ENSJJAG00000013564 #31 ENSJJAG00000016438 #31 Taf1 (ENSJJAG00000016231) #33 Itgb1bp2 (ENSJJAG00000022114) #34 ENSJJAG00000017151 #35 Zmym3 (ENSJJAG00000017423) #37 Gjb1 (ENSJJAG00000015275) Lesser Egyptian jerboa MODERN SPECIES 71 Zfhx3 (ENSJJAG00000004370) ENSJJAG00000016503 Pmfbp1 (ENSJJAG00000021758) Dhx38 (ENSJJAG00000015149) Txnl4b (ENSJJAG00000014020) Hp (ENSJJAG00000000389) Dhodh (ENSJJAG00000004380) Pkd1l3 (ENSJJAG00000019074) Ist1 (ENSJJAG00000009199) Zfp821 (ENSJJAG00000017771) ENSJJAG00000004633 ENSJJAG00000006838 Ap1g1 (ENSJJAG00000022831) Phlpp2 (ENSJJAG00000018183) Marveld3 (ENSJJAG00000015672) ENSJJAG00000016248 #22 Tat (ENSJJAG00000015605) Chst4 (ENSJJAG00000016154) Zfp612 (ENSJJAG00000014956) Tle7 (ENSJJAG00000020440) Calb2 (ENSJJAG00000019534) ENSJJAG00000013980 ENSJJAG00000010966 Hydin (ENSJJAG00000024000) ENSJJAG00000018488 Vac14 (ENSJJAG00000000270) Mtss2 (ENSJJAG00000015697) Il34 (ENSJJAG00000013016) Sf3b3 (ENSJJAG00000003948) Cog4 (ENSJJAG00000013653) Fcsk (ENSJJAG00000022615) Kangaroo rat MODERN SPECIES 545 ENSDORG00000014278 Phka1 (ENSDORG00000013605) #21 Hdac8 (ENSDORG00000013603) #22 ENSDORG00000028620 Cited1 (ENSDORG00000025773) #23 Rps4x (ENSDORG00000008571) ##24 Ercc6l (ENSDORG00000007865) #25 ENSDORG00000024313 Nhsl2 (ENSDORG00000013046) #26 Rtl5 (ENSDORG00000024359) #27 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764.a ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Sciuridae ANCESTRAL SPECIES 35 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764.a ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.b #28 ENSGT00390000015252.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 Marmotini ANCESTRAL SPECIES 66 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.a.b #28 ENSGT00390000015252.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00390000018613.b.t.a ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 Marmotini_b ANCESTRAL SPECIES 251 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 Squirrel MODERN SPECIES 362 ENSSTOG00000020182 PHKA1 (ENSSTOG00000008458) #21 HDAC8 (ENSSTOG00000008440) #22 CITED1 (ENSSTOG00000008435) #23 ENSSTOG00000028692 #24 ENSSTOG00000025956 DGAT2L6 (ENSSTOG00000024800) AWAT1 (ENSSTOG00000011451) P2RY4 (ENSSTOG00000015697) Arr3 (ENSSTOG00000011462) PDZD11 (ENSSTOG00000027107) KIF4A (ENSSTOG00000009604) GDPD2 (ENSSTOG00000004472) DLG3 (ENSSTOG00000009640) TEX11 (ENSSTOG00000009656) SLC7A3 (ENSSTOG00000014255) SNX12 (ENSSTOG00000028586) FOXO4 (ENSSTOG00000014587) Arctic ground squirrel MODERN SPECIES 605 ENSUPAG00010015251 #20 PHKA1 (ENSUPAG00010015278) #21 HDAC8 (ENSUPAG00010016655) #22 CITED1 (ENSUPAG00010016670) #23 ENSUPAG00010016687 ##24 ERCC6L (ENSUPAG00010016692) #25 PIN4 (ENSUPAG00010016701) NHSL2 (ENSUPAG00010016706) #26 RTL5 (ENSUPAG00010016731) #27 Alpin marmot MODERN SPECIES 74 ENSMMMG00000021453 #20 ENSMMMG00000021472 PHKA1 (ENSMMMG00000021479) #21 HDAC8 (ENSMMMG00000021613) #22 CITED1 (ENSMMMG00000021638) #23 ENSMMMG00000021648 ##24 ERCC6L (ENSMMMG00000021653) #25 PIN4 (ENSMMMG00000021657) NHSL2 (ENSMMMG00000021658) #26 RTL5 (ENSMMMG00000021665) #27 ENSMMMG00000021670 #28 ENSMMMG00000021674 #28 ENSMMMG00000021680 #28 CXCR3 (ENSMMMG00000021685) #30 ENSMMMG00000021687 #31 ENSMMMG00000021699 ENSMMMG00000021704 ENSMMMG00000021716 #33 ENSMMMG00000021790 Eurasian red squirrel MODERN SPECIES 156 ABCB7 (ENSSVLG00005014285) #9 NEXMIF (ENSSVLG00005015017) #10 RLIM (ENSSVLG00005015096) #11 SLC16A2 (ENSSVLG00005015129) #12 ZCCHC13 (ENSSVLG00005015163) #13 ENSSVLG00005015182 #16 CDX4 (ENSSVLG00005015316) #17 NAP1L2 (ENSSVLG00005015352) #18 ENSSVLG00005015384 #18 ENSSVLG00005015416 #19 ENSSVLG00005015435 #19 ENSSVLG00005015457 ENSSVLG00005015556 ENSSVLG00005015655 PHKA1 (ENSSVLG00005015757) #21 HDAC8 (ENSSVLG00005016008) #22 CITED1 (ENSSVLG00005016381) #23 ENSSVLG00005016444 ##24 PIN4 (ENSSVLG00005016533) ERCC6L (ENSSVLG00005016734) #25 NHSL2 (ENSSVLG00005016754) #26 RTL5 (ENSSVLG00005016947) #27 ENSSVLG00005016970 #28 ENSSVLG00005017206 #28 ENSSVLG00005017271 #28 ENSSVLG00005017338 #28 ENSSVLG00005017662 #28 ENSSVLG00005017896 #28 SERP1 (ENSSVLG00005017996) ENSSVLG00005018019 #28 CXCR3 (ENSSVLG00005018095) #30 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.a.a ##24 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837.`b #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00390000012178.g.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000003601.a #16 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837.`b #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Hystricomorpha_b ANCESTRAL SPECIES 74 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837.`b #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442.sc.b #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Long-tailed chinchilla MODERN SPECIES 182 PHKA1 (ENSCLAG00000013584) #21 HDAC8 (ENSCLAG00000015755) #22 ENSCLAG00000015363 ENSCLAG00000015266 ##24 ENSCLAG00000015218 #25 PIN4 (ENSCLAG00000014880) RTL5 (ENSCLAG00000014510) #27 NHSL2 (ENSCLAG00000011242) #26 CXCR3 (ENSCLAG00000010111) #30 ENSCLAG00000009475 OGT (ENSCLAG00000006474) #31 ENSCLAG00000004940 #33 ITGB1BP2 (ENSCLAG00000003431) #34 NONO (ENSCLAG00000003642) #35 ZMYM3 (ENSCLAG00000003585) #37 GJB1 (ENSCLAG00000004895) NLGN3 (ENSCLAG00000006482) Degu MODERN SPECIES 321 PHKA1 (ENSODEG00000002058) #21 ENSODEG00000002103 HDAC8 (ENSODEG00000002146) #22 ENSODEG00000002191 ENSODEG00000002215 ENSODEG00000002252 RPS4X (ENSODEG00000002268) #24 ERCC6L (ENSODEG00000002328) #25 ENSODEG00000002336 NHSL2 (ENSODEG00000002360) #26 RTL5 (ENSODEG00000002380) #27 CXCR3 (ENSODEG00000002401) #30 OGT (ENSODEG00000002656) #31 ENSODEG00000002771 #33 ITGB1BP2 (ENSODEG00000002957) #34 ENSODEG00000002994 #35 ENSODEG00000018894 ZMYM3 (ENSODEG00000003059) #37 Guinea pig MODERN SPECIES 26 ENSCPOG00000036844 MAGT1 (ENSCPOG00000027554) ATRX (ENSCPOG00000007873) FGF16 (ENSCPOG00000007870) MAGEE1 (ENSCPOG00000039465) PBDC1 (ENSCPOG00000006794) ZDHHC15 (ENSCPOG00000006742) #7 UPRT (ENSCPOG00000035232) #8 ABCB7 (ENSCPOG00000010708) #9 NEXMIF (ENSCPOG00000014831) #10 RLIM (ENSCPOG00000031438) #11 SLC16A2 (ENSCPOG00000000465) #12 CHIC1 (ENSCPOG00000035632) #16 ENSCPOG00000009525 #19 PHKA1 (ENSCPOG00000005675) #21 HDAC8 (ENSCPOG00000005671) #22 ENSCPOG00000003816 ENSCPOG00000006337 ##24 ERCC6L (ENSCPOG00000011407) #25 PIN4 (ENSCPOG00000031758) NHSL2 (ENSCPOG00000005172) #26 RTL5 (ENSCPOG00000021990) #27 CXCR3 (ENSCPOG00000008446) #30 OGT (ENSCPOG00000014682) #31 ENSCPOG00000035003 #33 ENSCPOG00000039595 ITGB1BP2 (ENSCPOG00000038156) #34 ENSCPOG00000010263 #35 ZMYM3 (ENSCPOG00000010256) #37 NLGN3 (ENSCPOG00000006193) MED12 (ENSCPOG00000000903) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032788 ENSHGLG00000002294 ENSHGLG00000002255 ATP7A (ENSHGLG00000001804) ENSHGLG00000033714 ENSHGLG00000002230 ENSHGLG00000039396 PGK1 (ENSHGLG00000033746) ENSHGLG00000037603 ENSHGLG00000005962 ENSHGLG00000045054 CYSLTR1 (ENSHGLG00000036741) ENSHGLG00000018958 ENSHGLG00000009342 #21 ENSHGLG00000045192 HDAC8 (ENSHGLG00000015554) #22 CITED1 (ENSHGLG00000013001) #23 ENSHGLG00000009172 ##24 ERCC6L (ENSHGLG00000016594) #25 PIN4 (ENSHGLG00000043461) ENSHGLG00000033358 NHSL2 (ENSHGLG00000004791) #26 RTL5 (ENSHGLG00000043760) #27 ENSHGLG00000047657 ENSHGLG00000050364 ENSHGLG00000037492 #28 ENSHGLG00000006799 ENSHGLG00000034062 ENSHGLG00000008499 #30 ENSHGLG00000050614 ENSHGLG00000042327 Lagomorpha ANCESTRAL SPECIES 40 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764.a ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.e.a #28 ENSGT00390000015252.f #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.sc.a.b #35 ENSGT00940000160693 #37 Pika MODERN SPECIES 2015 HDAC8 (ENSOPRG00000002816) #22 Rabbit MODERN SPECIES 1401 ENSOCUG00000029369 FAM199X (ENSOCUG00000014228) SLC25A53 (ENSOCUG00000003541) ENSOCUG00000014764 ENSOCUG00000021083 ENSOCUG00000024276 CHIC1 (ENSOCUG00000009801) #16 CDX4 (ENSOCUG00000013356) #17 ENSOCUG00000027857 NAP1L2 (ENSOCUG00000007414) #18 ENSOCUG00000002565 #19 ENSOCUG00000025806 #20 ENSOCUG00000029608 #20 ENSOCUG00000024072 #20 PHKA1 (ENSOCUG00000024271) #21 HDAC8 (ENSOCUG00000013317) #22 ENSOCUG00000013315 #23 ENSOCUG00000015749 #24 ERCC6L (ENSOCUG00000008724) #25 PIN4 (ENSOCUG00000008715) RTL5 (ENSOCUG00000008707) #27 NHSL2 (ENSOCUG00000014345) #26 ENSOCUG00000022701 #28 ENSOCUG00000021556 #28 ENSOCUG00000029373 #28 ENSOCUG00000029215 #28 ENSOCUG00000036122 #28 ENSOCUG00000003502 ENSOCUG00000028210 #28 ENSOCUG00000030259 #28 CXCR3 (ENSOCUG00000015578) #30 Tree shrew MODERN SPECIES 5123 PHKA1 (ENSTBEG00000015214) #21 HDAC8 (ENSTBEG00000014893) #22 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157843 #22 Common shrew MODERN SPECIES 3321 HDAC8 (ENSSARG00000008871) #22 Hedgehog MODERN SPECIES 4358 HDAC8 (ENSEEUG00000014963) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00940000166485.a ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Caniformia ANCESTRAL SPECIES 22 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00940000166485.a ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Ursidae ANCESTRAL SPECIES 47 ENSGT00390000016333 ENSGT00940000163487 ENSGT01030000239825 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Ursus ANCESTRAL SPECIES 257 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 Polar bear MODERN SPECIES 345 PHKA1 (ENSUMAG00000004085) #21 HDAC8 (ENSUMAG00000004851) #22 CITED1 (ENSUMAG00000004857) #23 ENSUMAG00000004859 ##24 ERCC6L (ENSUMAG00000004863) #25 PIN4 (ENSUMAG00000004865) ENSUMAG00000004886 #27 American black bear MODERN SPECIES 1321 ENSUAMG00000027978 #20 ENSUAMG00000027976 #21 ENSUAMG00000027943 #21 HDAC8 (ENSUAMG00000027942) #22 Giant Panda MODERN SPECIES 2288 ENSAMEG00000026155 ZDHHC15 (ENSAMEG00000017414) #7 ENSAMEG00000023973 UPRT (ENSAMEG00000001806) #8 ABCB7 (ENSAMEG00000001785) #9 NEXMIF (ENSAMEG00000002822) #10 RLIM (ENSAMEG00000002826) #11 SLC16A2 (ENSAMEG00000002832) #12 ENSAMEG00000010405 ZCCHC13 (ENSAMEG00000031042) #13 CHIC1 (ENSAMEG00000016309) #16 CDX4 (ENSAMEG00000002483) #17 NAP1L2 (ENSAMEG00000026435) #18 ENSAMEG00000026180 PHKA1 (ENSAMEG00000005856) #21 HDAC8 (ENSAMEG00000005840) #22 ENSAMEG00000027356 #23 RPS4X (ENSAMEG00000005805) ##24 ERCC6L (ENSAMEG00000005804) #25 ENSAMEG00000005801 ENSAMEG00000018760 #27 NHSL2 (ENSAMEG00000018764) #26 ENSAMEG00000025938 #28 CXCR3 (ENSAMEG00000019767) #30 ENSAMEG00000016181 OGT (ENSAMEG00000016129) #31 ENSAMEG00000016102 #33 ENSAMEG00000019575 ITGB1BP2 (ENSAMEG00000016081) #34 NONO (ENSAMEG00000016057) #35 ZMYM3 (ENSAMEG00000016021) #37 Mustelinae ANCESTRAL SPECIES 110 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.b #24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Ferret MODERN SPECIES 402 ENSMPUG00000005379 #20 PHKA1 (ENSMPUG00000005353) #21 HDAC8 (ENSMPUG00000005345) #22 CITED1 (ENSMPUG00000005336) #23 ENSMPUG00000005294 #24 ERCC6L (ENSMPUG00000005291) #25 PIN4 (ENSMPUG00000005287) NHSL2 (ENSMPUG00000005280) #26 RTL5 (ENSMPUG00000018491) #27 ENSMPUG00000005276 ENSMPUG00000005269 #28 CXCR3 (ENSMPUG00000005263) #30 ENSMPUG00000005256 OGT (ENSMPUG00000005097) #31 ENSMPUG00000005076 #33 ENSMPUG00000005070 ITGB1BP2 (ENSMPUG00000004948) #34 NONO (ENSMPUG00000004937) #35 American mink MODERN SPECIES 463 ENSNVIG00000024463 #20 PHKA1 (ENSNVIG00000024450) #21 HDAC8 (ENSNVIG00000024413) #22 CITED1 (ENSNVIG00000024410) #23 ENSNVIG00000024409 ##24 ERCC6L (ENSNVIG00000024408) #25 ENSNVIG00000024405 RGAG4 (ENSNVIG00000024404) #27 NHSL2 (ENSNVIG00000024397) #26 Canidae ANCESTRAL SPECIES 59 ENSGT00390000016333.r ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00940000166485.a ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.`b #35 ENSGT00940000160693 #37 Canis_lupus ANCESTRAL SPECIES 44 ENSGT00390000016333.r.a ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00940000166485.a ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.eb.a ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442.`b #35 ENSGT00940000160693 #37 Dog MODERN SPECIES 144 ABCB7 (ENSCAFG00845030100) #9 ENSCAFG00845030063 NEXMIF (ENSCAFG00845030052) #10 RLIM (ENSCAFG00845030030) #11 SLC16A2 (ENSCAFG00845029973) #12 ENSCAFG00845029963 ZCCHC13 (ENSCAFG00845029957) #13 ENSCAFG00845029889 CHIC1 (ENSCAFG00845029847) #16 CDX4 (ENSCAFG00845029824) #17 ENSCAFG00845029796 #19 ENSCAFG00845029787 ENSCAFG00845029763 #20 ENSCAFG00845029726 #20 ENSCAFG00845023674 #21 HDAC8 (ENSCAFG00845020238) #22 CITED1 (ENSCAFG00845020063) #23 RPS4X (ENSCAFG00845020005) ##24 ERCC6L (ENSCAFG00845019976) #25 PIN4 (ENSCAFG00845019941) RTL5 (ENSCAFG00845019888) #27 ENSCAFG00845019851 NHSL2 (ENSCAFG00845019495) #26 ENSCAFG00845019289 #28 ENSCAFG00845019192 #28 CXCR3 (ENSCAFG00845019157) #30 ENSCAFG00845019086 OGT (ENSCAFG00845018937) #31 TAF1 (ENSCAFG00845018115) #33 ENSCAFG00845017943 ITGB1BP2 (ENSCAFG00845017817) #34 Dingo MODERN SPECIES 265 UPRT (ENSCAFG00020024656) #8 ABCB7 (ENSCAFG00020024573) #9 NEXMIF (ENSCAFG00020024551) #10 RLIM (ENSCAFG00020024549) #11 SLC16A2 (ENSCAFG00020024545) #12 ENSCAFG00020024541 ZCCHC13 (ENSCAFG00020024539) #13 ENSCAFG00020024526 CHIC1 (ENSCAFG00020024519) #16 ENSCAFG00020024517 #17 NAP1L2 (ENSCAFG00020024516) #18 ENSCAFG00020024512 #20 ENSCAFG00020024506 #20 ENSCAFG00020024502 #20 PHKA1 (ENSCAFG00020021553) #21 HDAC8 (ENSCAFG00020021326) #22 CITED1 (ENSCAFG00020021325) #23 ENSCAFG00020021317 ##24 ERCC6L (ENSCAFG00020021313) #25 ENSCAFG00020021311 NHSL2 (ENSCAFG00020021306) #26 ENSCAFG00020021301 #28 CXCR3 (ENSCAFG00020021299) #30 OGT (ENSCAFG00020021017) #31 ENSCAFG00020020386 #33 ENSCAFG00020020337 ITGB1BP2 (ENSCAFG00020020322) #34 NONO (ENSCAFG00020020298) #35 ENSCAFG00020020289 #37 ENSCAFG00020020279 #37 GJB1 (ENSCAFG00020020275) Red fox MODERN SPECIES 175 PHKA1 (ENSVVUG00000025468) #21 HDAC8 (ENSVVUG00000025508) #22 CITED1 (ENSVVUG00000025509) #23 RPS4X (ENSVVUG00000025510) ##24 ERCC6L (ENSVVUG00000025512) #25 NHSL2 (ENSVVUG00000025513) #26 RTL5 (ENSVVUG00000025514) #27 ENSVVUG00000000109 #28 CXCR3 (ENSVVUG00000000156) #30 ENSVVUG00000000213 OGT (ENSVVUG00000000263) #31 TAF1 (ENSVVUG00000000579) #33 ENSVVUG00000003285 ITGB1BP2 (ENSVVUG00000003333) #34 NONO (ENSVVUG00000003390) #35 ZMYM3 (ENSVVUG00000003481) #37 GJB1 (ENSVVUG00000005399) Felidae ANCESTRAL SPECIES 12 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00940000166485.a ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Panthera ANCESTRAL SPECIES 47 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.ib ENSGT00950000182963.b.b #26 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Panthera_a ANCESTRAL SPECIES 56 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029.ib ENSGT00950000182963.b.b #26 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 lion MODERN SPECIES 88 PRAF2 (ENSPLOG00000017750) GPKOW (ENSPLOG00000017787) GPR173 (ENSPLOG00000017827) TSPYL2 (ENSPLOG00000017848) KANTR (ENSPLOG00000017918) ENSPLOG00000017925 KDM5C (ENSPLOG00000018055) IQSEC2 (ENSPLOG00000018505) ENSPLOG00000018937 SMC1A (ENSPLOG00000018969) RIBC1 (ENSPLOG00000019163) ENSPLOG00000019275 HUWE1 (ENSPLOG00000019431) ENSPLOG00000020226 ENSPLOG00000020264 #21 HDAC8 (ENSPLOG00000020404) #22 CITED1 (ENSPLOG00000020526) #23 ENSPLOG00000020555 ##24 ENSPLOG00000020673 ERCC6L (ENSPLOG00000020765) #25 NHSL2 (ENSPLOG00000020815) #26 RTL5 (ENSPLOG00000020907) #27 ENSPLOG00000020915 ENSPLOG00000020959 #28 CXCR3 (ENSPLOG00000021020) #30 ENSPLOG00000021053 ENSPLOG00000021106 #31 ENSPLOG00000021138 #31 ENSPLOG00000021269 #33 ENSPLOG00000021598 ITGB1BP2 (ENSPLOG00000021634) #34 leopard MODERN SPECIES 252 PHKA1 (ENSPPRG00000011456) #21 HDAC8 (ENSPPRG00000011115) #22 CITED1 (ENSPPRG00000010889) #23 ENSPPRG00000010809 ##24 Tiger MODERN SPECIES 337 ENSPTIG00000019640 #20 PHKA1 (ENSPTIG00000020625) #21 HDAC8 (ENSPTIG00000018831) #22 ENSPTIG00000017192 #23 RPS4X (ENSPTIG00000016567) ##24 SYT10 (ENSPTIG00000015718) ENSPTIG00000006779 ENSPTIG00000012362 CPNE8 (ENSPTIG00000009449) KIF21A (ENSPTIG00000013639) ABCD2 (ENSPTIG00000012386) C12orf40 (ENSPTIG00000011119) SLC2A13 (ENSPTIG00000008372) LRRK2 (ENSPTIG00000020651) CNTN1 (ENSPTIG00000007852) PDZRN4 (ENSPTIG00000004191) GXYLT1 (ENSPTIG00000019972) ENSPTIG00000019364 Cat MODERN SPECIES 252 ENSFCAG00000025696 ABCB7 (ENSFCAG00000009557) #9 RLIM (ENSFCAG00000003136) #11 SLC16A2 (ENSFCAG00000008075) #12 ZCCHC13 (ENSFCAG00000034344) #13 ENSFCAG00000034997 ENSFCAG00000040388 ENSFCAG00000022629 CHIC1 (ENSFCAG00000025058) #16 ENSFCAG00000039701 #19 ENSFCAG00000043804 ENSFCAG00000036265 #20 ENSFCAG00000045208 #20 ENSFCAG00000050490 PHKA1 (ENSFCAG00000007121) #21 HDAC8 (ENSFCAG00000005065) #22 CITED1 (ENSFCAG00000023693) #23 ERCC6L (ENSFCAG00000012038) #25 PIN4 (ENSFCAG00000012036) RTL5 (ENSFCAG00000024876) #27 ENSFCAG00000037362 NHSL2 (ENSFCAG00000009225) #26 CXCR3 (ENSFCAG00000002186) #30 ENSFCAG00000051813 OGT (ENSFCAG00000002182) #31 ENSFCAG00000014809 #33 ENSFCAG00000021936 ITGB1BP2 (ENSFCAG00000014807) #34 NONO (ENSFCAG00000043511) #35 ZMYM3 (ENSFCAG00000014806) #37 NLGN3 (ENSFCAG00000014804) Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Chiroptera ANCESTRAL SPECIES 62 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Megabat MODERN SPECIES 371 HDAC8 (ENSPVAG00000008286) #22 CITED1 (ENSPVAG00000008285) #23 Microchiroptera ANCESTRAL SPECIES 54 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00920000150764 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Greater horseshoe bat MODERN SPECIES ABCB7 (ENSRFEG00010000009) #9 NEXMIF (ENSRFEG00010000012) #10 RLIM (ENSRFEG00010000013) #11 SLC16A2 (ENSRFEG00010000014) #12 ENSRFEG00010000015 ENSRFEG00010000018 CHIC1 (ENSRFEG00010000019) #16 CDX4 (ENSRFEG00010000020) #17 ENSRFEG00010000021 ENSRFEG00010000022 NAP1L2 (ENSRFEG00010000023) #18 ENSRFEG00010000024 #19 ENSRFEG00010000025 #20 ENSRFEG00010000026 #20 PHKA1 (ENSRFEG00010000027) #21 HDAC8 (ENSRFEG00010000028) #22 ENSRFEG00010000029 #23 ENSRFEG00010000030 ##24 PIN4 (ENSRFEG00010000031) ERCC6L (ENSRFEG00010000032) #25 NHSL2 (ENSRFEG00010000033) #26 RTL5 (ENSRFEG00010000034) #27 ENSRFEG00010000035 #28 ENSRFEG00010000036 #28 CXCR3 (ENSRFEG00010000037) #30 ENSRFEG00010000039 #31 ENSRFEG00010000041 #33 ENSRFEG00010000042 ENSRFEG00010000043 ITGB1BP2 (ENSRFEG00010000045) #34 ENSRFEG00010000046 #35 Microbat DUPLICATION Microbat MODERN SPECIES 1115 SLC4A11 (ENSMLUG00000000362) ITPA (ENSMLUG00000000358) DDRGK1 (ENSMLUG00000000352) LZTS3 (ENSMLUG00000000347) FASTKD5 (ENSMLUG00000000343) UBOX5 (ENSMLUG00000025497) PTPRA (ENSMLUG00000029093) VPS16 (ENSMLUG00000016651) PCED1A (ENSMLUG00000028662) TMEM239 (ENSMLUG00000002712) CPXM1 (ENSMLUG00000002715) EBF4 (ENSMLUG00000023832) IDH3B (ENSMLUG00000008193) NOP56 (ENSMLUG00000027085) TMC2 (ENSMLUG00000023589) ENSMLUG00000027258 #22 SNRPB (ENSMLUG00000016951) TGM6 (ENSMLUG00000016945) ENSMLUG00000030507 Microbat MODERN SPECIES 941 ZC4H2 (ENSMLUG00000008305) ENSMLUG00000027582 ZC3H12B (ENSMLUG00000013635) LAS1L (ENSMLUG00000013640) ENSMLUG00000030463 ENSMLUG00000005009 MSN (ENSMLUG00000008116) VSIG4 (ENSMLUG00000003881) HEPH (ENSMLUG00000000638) ENSMLUG00000030523 ZCCHC13 (ENSMLUG00000002814) #13 CHIC1 (ENSMLUG00000025620) #16 ENSMLUG00000027332 NAP1L2 (ENSMLUG00000001703) #18 PHKA1 (ENSMLUG00000005413) #21 ENSMLUG00000005406 #22 CITED1 (ENSMLUG00000005401) #23 ENSMLUG00000006172 RPS4X (ENSMLUG00000011685) #24 ERCC6L (ENSMLUG00000011670) #25 PIN4 (ENSMLUG00000012073) NHSL2 (ENSMLUG00000012253) #26 RTL5 (ENSMLUG00000012246) #27 ENSMLUG00000027587 #28 CXCR3 (ENSMLUG00000008266) #30 OGT (ENSMLUG00000008213) #31 ENSMLUG00000023133 ENSMLUG00000009092 #33 ITGB1BP2 (ENSMLUG00000022665) #34 NONO (ENSMLUG00000002489) #35 ENSMLUG00000026033 Equus ANCESTRAL SPECIES 27 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252.y.b #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Donkey MODERN SPECIES 36 ABCB7 (ENSEASG00005004704) #9 NEXMIF (ENSEASG00005012051) #10 RLIM (ENSEASG00005020336) #11 SLC16A2 (ENSEASG00005025806) #12 ZCCHC13 (ENSEASG00005025614) #13 ENSEASG00005026432 ENSEASG00005034688 CHIC1 (ENSEASG00005034271) #16 ENSEASG00005010490 #17 NAP1L2 (ENSEASG00005032059) #18 ENSEASG00005034662 #19 ENSEASG00005010399 #19 ENSEASG00005030915 #20 ENSEASG00005030313 PHKA1 (ENSEASG00005022796) #21 HDAC8 (ENSEASG00005023051) #22 CITED1 (ENSEASG00005010784) #23 ENSEASG00005032986 ##24 ERCC6L (ENSEASG00005007025) #25 PIN4 (ENSEASG00005007027) RTL5 (ENSEASG00005028557) #27 NHSL2 (ENSEASG00005031208) #26 ENSEASG00005035382 ENSEASG00005037481 #28 ENSEASG00005020354 #30 ENSEASG00005035444 OGT (ENSEASG00005020382) #31 ENSEASG00005007044 ENSEASG00005022163 #33 ENSEASG00005025769 ITGB1BP2 (ENSEASG00005036980) #34 Horse MODERN SPECIES 480 UPRT (ENSECAG00000015489) #8 ABCB7 (ENSECAG00000000643) #9 NEXMIF (ENSECAG00000023442) #10 RLIM (ENSECAG00000020600) #11 SLC16A2 (ENSECAG00000019968) #12 CHIC1 (ENSECAG00000016317) #16 ENSECAG00000046425 CDX4 (ENSECAG00000037034) #17 ENSECAG00000044847 NAP1L2 (ENSECAG00000009018) #18 ENSECAG00000002620 #19 ENSECAG00000006837 #20 ENSECAG00000035808 #20 ENSECAG00000033249 PHKA1 (ENSECAG00000023809) #21 HDAC8 (ENSECAG00000018525) #22 CITED1 (ENSECAG00000056091) #23 RPS4X (ENSECAG00000010852) ##24 ERCC6L (ENSECAG00000002513) #25 PIN4 (ENSECAG00000000364) RTL5 (ENSECAG00000023894) #27 NHSL2 (ENSECAG00000002472) #26 ENSECAG00000032482 #28 ENSECAG00000039787 #28 ENSECAG00000040049 ENSECAG00000055137 CXCR3 (ENSECAG00000023587) #30 ENSECAG00000023391 OGT (ENSECAG00000023721) #31 ENSECAG00000058792 ENSECAG00000006365 #33 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Suina ANCESTRAL SPECIES 7 ENSGT00940000160087 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311.rb.b #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Chacoan peccary MODERN SPECIES 22 ZDHHC15 (ENSCWAG00000002160) #7 UPRT (ENSCWAG00000002203) #8 ABCB7 (ENSCWAG00000002270) #9 NEXMIF (ENSCWAG00000002739) #10 RLIM (ENSCWAG00000002752) #11 SLC16A2 (ENSCWAG00000002764) #12 ZCCHC13 (ENSCWAG00000002770) #13 CHIC1 (ENSCWAG00000002797) #16 CDX4 (ENSCWAG00000002816) #17 NAP1L2 (ENSCWAG00000002830) #18 ENSCWAG00000002841 #18 ENSCWAG00000002857 #19 ENSCWAG00000002863 #19 ENSCWAG00000002873 PHKA1 (ENSCWAG00000002918) #21 HDAC8 (ENSCWAG00000003037) #22 CITED1 (ENSCWAG00000003068) #23 ENSCWAG00000003080 ##24 PIN4 (ENSCWAG00000003103) ERCC6L (ENSCWAG00000003127) #25 NHSL2 (ENSCWAG00000003145) #26 RTL5 (ENSCWAG00000003169) #27 ENSCWAG00000003178 #28 CXCR3 (ENSCWAG00000003190) #30 OGT (ENSCWAG00000003205) #31 ENSCWAG00000003266 #33 ENSCWAG00000003383 ITGB1BP2 (ENSCWAG00000003394) #34 NONO (ENSCWAG00000003409) #35 ZMYM3 (ENSCWAG00000003425) #37 GJB1 (ENSCWAG00000003454) Pig MODERN SPECIES 300 ENSSSCG00000045470 SLC16A2 (ENSSSCG00000029458) #12 ZCCHC13 (ENSSSCG00000035737) #13 CHIC1 (ENSSSCG00000012416) #16 CDX4 (ENSSSCG00000021225) #17 NAP1L2 (ENSSSCG00000012415) #18 ENSSSCG00000031849 #18 ENSSSCG00000032167 #19 ENSSSCG00000053499 #19 ENSSSCG00000060899 ENSSSCG00000040223 #20 ENSSSCG00000031328 #20 ENSSSCG00000055158 ENSSSCG00000063130 PHKA1 (ENSSSCG00000012411) #21 HDAC8 (ENSSSCG00000021200) #22 CITED1 (ENSSSCG00000012409) #23 ENSSSCG00000034717 RPS4X (ENSSSCG00000012405) ##24 ENSSSCG00000012406 ERCC6L (ENSSSCG00000021834) #25 PIN4 (ENSSSCG00000023312) RTL5 (ENSSSCG00000020876) #27 NHSL2 (ENSSSCG00000012408) #26 ENSSSCG00000053529 #28 ENSSSCG00000052088 #28 ENSSSCG00000057131 #28 CXCR3 (ENSSSCG00000012402) #30 OGT (ENSSSCG00000012403) #31 ENSSSCG00000027115 #33 ENSSSCG00000012392 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Camelidae ANCESTRAL SPECIES 43 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000173095 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Arabian camel MODERN SPECIES 204 ZDHHC15 (ENSCDRG00005020979) #7 UPRT (ENSCDRG00005020970) #8 ABCB7 (ENSCDRG00005020791) #9 NEXMIF (ENSCDRG00005020765) #10 RLIM (ENSCDRG00005020761) #11 SLC16A2 (ENSCDRG00005020750) #12 ZCCHC13 (ENSCDRG00005020743) #13 ENSCDRG00005020728 CHIC1 (ENSCDRG00005020723) #16 CDX4 (ENSCDRG00005020715) #17 NAP1L2 (ENSCDRG00005020710) #18 ENSCDRG00005020706 #18 ENSCDRG00005020694 #19 ENSCDRG00005020647 #20 PHKA1 (ENSCDRG00005020606) #21 HDAC8 (ENSCDRG00005010238) #22 CITED1 (ENSCDRG00005009756) #23 ENSCDRG00005009701 ##24 ERCC6L (ENSCDRG00005009654) #25 PIN4 (ENSCDRG00005009624) RTL5 (ENSCDRG00005009605) #27 NHSL2 (ENSCDRG00005009450) #26 ENSCDRG00005009260 #28 ENSCDRG00005009238 ENSCDRG00005009119 #28 CXCR3 (ENSCDRG00005009075) #30 OGT (ENSCDRG00005017831) #31 ENSCDRG00005017785 ENSCDRG00005017651 #33 ENSCDRG00005017566 ITGB1BP2 (ENSCDRG00005017480) #34 Alpaca MODERN SPECIES 3279 PHKA1 (ENSVPAG00000010956) #21 HDAC8 (ENSVPAG00000010955) #22 CITED1 (ENSVPAG00000010953) #23 RPS4X (ENSVPAG00000010952) #24 ERCC6L (ENSVPAG00000010950) #25 PIN4 (ENSVPAG00000010947) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Cetacea ANCESTRAL SPECIES 19 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000009110.ab ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Odontoceti ANCESTRAL SPECIES 19 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000009110.ab ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b.o #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Odontoceti_a ANCESTRAL SPECIES 28 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000009110.ab ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.a.a ##24 ENSGT00390000005569.x.a.b.b.a.b.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b.o #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Dolphin MODERN SPECIES 931 PHKA1 (ENSTTRG00000003470) #21 HDAC8 (ENSTTRG00000003469) #22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00390000009110.ab ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.a.b.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT00390000015252.q #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b.o #31 ENSGT00990000210226.a ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 Vaquita MODERN SPECIES 34 RLIM (ENSPSNG00000021171) #11 SLC16A2 (ENSPSNG00000021147) #12 ENSPSNG00000021128 ZCCHC13 (ENSPSNG00000021100) #13 CHIC1 (ENSPSNG00000021038) #16 CDX4 (ENSPSNG00000021015) #17 NAP1L2 (ENSPSNG00000020996) #18 ENSPSNG00000020976 #18 ENSPSNG00000020961 #19 ENSPSNG00000020950 #19 ENSPSNG00000020922 #20 ENSPSNG00000020883 #20 ENSPSNG00000020842 #20 PHKA1 (ENSPSNG00000020622) #21 ENSPSNG00000020488 HDAC8 (ENSPSNG00000020257) #22 CITED1 (ENSPSNG00000020135) #23 ENSPSNG00000020120 ENSPSNG00000020028 ##24 ERCC6L (ENSPSNG00000019984) #25 PIN4 (ENSPSNG00000019855) RTL5 (ENSPSNG00000019829) #27 NHSL2 (ENSPSNG00000019714) #26 ENSPSNG00000019652 #28 ENSPSNG00000019407 #28 ENSPSNG00000019357 #28 ENSPSNG00000019317 #28 CXCR3 (ENSPSNG00000019284) #30 ENSPSNG00000019258 ENSPSNG00000019210 #31 ENSPSNG00000019173 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00960000186788.c ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.b.a.b.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191 #27 ENSGT00950000182963.b.b #26 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b.o #31 ENSGT00990000210226.a ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Beluga whale MODERN SPECIES 108 ENSDLEG00000011989 #20 ENSDLEG00000012015 #20 PHKA1 (ENSDLEG00000012043) #21 HDAC8 (ENSDLEG00000012186) #22 ENSDLEG00000012218 CITED1 (ENSDLEG00000012236) #23 ENSDLEG00000012246 RPS4X (ENSDLEG00000012257) ##24 ERCC6L (ENSDLEG00000012271) #25 PIN4 (ENSDLEG00000012278) NHSL2 (ENSDLEG00000012303) #26 RTL5 (ENSDLEG00000012336) #27 ENSDLEG00000012348 Narwhal MODERN SPECIES 309 UPRT (ENSMMNG00015011908) #8 ABCB7 (ENSMMNG00015011807) #9 ENSMMNG00015011764 NEXMIF (ENSMMNG00015011752) #10 RLIM (ENSMMNG00015011741) #11 SLC16A2 (ENSMMNG00015011721) #12 ENSMMNG00015011664 CHIC1 (ENSMMNG00015011634) #16 CDX4 (ENSMMNG00015011607) #17 NAP1L2 (ENSMMNG00015011594) #18 ENSMMNG00015011584 #18 ENSMMNG00015011562 #20 ENSMMNG00015011531 PHKA1 (ENSMMNG00015010994) #21 ENSMMNG00015010743 HDAC8 (ENSMMNG00015010620) #22 CITED1 (ENSMMNG00015010507) #23 ENSMMNG00015010498 RPS4X (ENSMMNG00015010476) ##24 ERCC6L (ENSMMNG00015010438) #25 PIN4 (ENSMMNG00015010421) RTL5 (ENSMMNG00015010410) #27 NHSL2 (ENSMMNG00015010379) #26 CXCR3 (ENSMMNG00015010353) #30 ENSMMNG00015010315 #31 ENSMMNG00015010298 ENSMMNG00015010247 #33 ENSMMNG00015010213 ITGB1BP2 (ENSMMNG00015010179) #34 NONO (ENSMMNG00015010158) #35 ZMYM3 (ENSMMNG00015010107) #37 Sperm whale MODERN SPECIES 13 ABCB7 (ENSPCTG00005014159) #9 ENSPCTG00005013967 NEXMIF (ENSPCTG00005013886) #10 RLIM (ENSPCTG00005013848) #11 SLC16A2 (ENSPCTG00005013786) #12 ENSPCTG00005013715 ZCCHC13 (ENSPCTG00005013657) #13 ENSPCTG00005013621 ENSPCTG00005013600 CHIC1 (ENSPCTG00005013523) #16 CDX4 (ENSPCTG00005013461) #17 NAP1L2 (ENSPCTG00005013426) #18 ENSPCTG00005013403 #19 PHKA1 (ENSPCTG00005012900) #21 ENSPCTG00005012840 HDAC8 (ENSPCTG00005012589) #22 CITED1 (ENSPCTG00005012508) #23 RPS4X (ENSPCTG00005012433) ##24 ERCC6L (ENSPCTG00005012377) #25 PIN4 (ENSPCTG00005012267) ENSPCTG00005012239 #27 NHSL2 (ENSPCTG00005012113) #26 CXCR3 (ENSPCTG00005012075) #30 ENSPCTG00005012056 ENSPCTG00005012425 #31 TAF1 (ENSPCTG00005011907) #33 ENSPCTG00005011800 ITGB1BP2 (ENSPCTG00005011575) #34 NONO (ENSPCTG00005011492) #35 ZMYM3 (ENSPCTG00005011284) #37 GJB1 (ENSPCTG00005011243) Blue whale MODERN SPECIES 40 UPRT (ENSBMSG00010020790) #8 ABCB7 (ENSBMSG00010020772) #9 ENSBMSG00010020759 NEXMIF (ENSBMSG00010020750) #10 RLIM (ENSBMSG00010020736) #11 ENSBMSG00010020729 SLC16A2 (ENSBMSG00010020722) #12 ENSBMSG00010020715 ZCCHC13 (ENSBMSG00010020707) #13 CHIC1 (ENSBMSG00010020642) #16 CDX4 (ENSBMSG00010020620) #17 ENSBMSG00010020608 #19 ENSBMSG00010020600 ENSBMSG00010020587 PHKA1 (ENSBMSG00010020455) #21 HDAC8 (ENSBMSG00010020145) #22 CITED1 (ENSBMSG00010020081) #23 ENSBMSG00010020072 ##24 ERCC6L (ENSBMSG00010020056) #25 PIN4 (ENSBMSG00010020035) RTL5 (ENSBMSG00010020020) #27 NHSL2 (ENSBMSG00010019980) #26 CXCR3 (ENSBMSG00010019965) #30 ENSBMSG00010019935 #31 ENSBMSG00010019866 #33 ENSBMSG00010019843 ITGB1BP2 (ENSBMSG00010019802) #34 NONO (ENSBMSG00010019773) #35 ZMYM3 (ENSBMSG00010019664) #37 GJB1 (ENSBMSG00010019635) ENSBMSG00010019629 Pecora ANCESTRAL SPECIES 27 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00410000029400 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.a #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Yarkand deer MODERN SPECIES 1323 ZDHHC15 (ENSCHYG00000011470) #7 UPRT (ENSCHYG00000011786) #8 ABCB7 (ENSCHYG00000012079) #9 ENSCHYG00000013033 NEXMIF (ENSCHYG00000013048) #10 RLIM (ENSCHYG00000013107) #11 SLC16A2 (ENSCHYG00000013135) #12 ENSCHYG00000013216 ENSCHYG00000013357 CHIC1 (ENSCHYG00000013382) #16 CDX4 (ENSCHYG00000013503) #17 NAP1L2 (ENSCHYG00000013551) #18 ENSCHYG00000013611 #19 PHKA1 (ENSCHYG00000014051) #21 ENSCHYG00000021251 HDAC8 (ENSCHYG00000021302) #22 CITED1 (ENSCHYG00000021899) #23 ENSCHYG00000022005 ##24 ENSCHYG00000022048 ERCC6L (ENSCHYG00000022233) #25 NHSL2 (ENSCHYG00000022300) #26 RTL5 (ENSCHYG00000022577) #27 ENSCHYG00000022594 #28 CXCR3 (ENSCHYG00000022631) #30 ENSCHYG00000022668 OGT (ENSCHYG00000022764) #31 ENSCHYG00000022934 #33 ENSCHYG00000023878 ITGB1BP2 (ENSCHYG00000023933) #34 ENSCHYG00000024097 NONO (ENSCHYG00000024105) #35 Percora_a ANCESTRAL SPECIES 22 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00410000029400 ENSGT00940000163063 #20 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.a #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Siberian musk deer MODERN SPECIES 9 UPRT (ENSMMSG00000000982) #8 ABCB7 (ENSMMSG00000001025) #9 ENSMMSG00000001187 NEXMIF (ENSMMSG00000001198) #10 RLIM (ENSMMSG00000001223) #11 SLC16A2 (ENSMMSG00000001236) #12 ZCCHC13 (ENSMMSG00000001254) #13 ENSMMSG00000001290 CHIC1 (ENSMMSG00000001301) #16 CDX4 (ENSMMSG00000001319) #17 ENSMMSG00000001340 #20 ENSMMSG00000001364 #20 ENSMMSG00000001383 ENSMMSG00000001396 #19 PHKA1 (ENSMMSG00000001414) #21 HDAC8 (ENSMMSG00000001581) #22 CITED1 (ENSMMSG00000001777) #23 ENSMMSG00000001800 ##24 ENSMMSG00000001833 ERCC6L (ENSMMSG00000001868) #25 NHSL2 (ENSMMSG00000001888) #26 RTL5 (ENSMMSG00000001915) #27 Bovidae ANCESTRAL SPECIES 23 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163063 #20 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.a #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 Bovinae ANCESTRAL SPECIES 38 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000160311.`c #19 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.a #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Bos ANCESTRAL SPECIES 30 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000160311.`c #19 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.b #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Bos_a ANCESTRAL SPECIES 19 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191.a #27 ENSGT00940000163191.b.a #27 ENSGT00390000015252.s.a.a #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Domestic yak MODERN SPECIES 69 ZDHHC15 (ENSBGRG00000023027) #7 ENSBGRG00000023226 UPRT (ENSBGRG00000023239) #8 ABCB7 (ENSBGRG00000023373) #9 ENSBGRG00000023925 NEXMIF (ENSBGRG00000023961) #10 RLIM (ENSBGRG00000023991) #11 SLC16A2 (ENSBGRG00000024018) #12 ZCCHC13 (ENSBGRG00000024056) #13 ENSBGRG00000024150 ENSBGRG00000024158 CHIC1 (ENSBGRG00000024180) #16 CDX4 (ENSBGRG00000024264) #17 ENSBGRG00000024296 #20 PHKA1 (ENSBGRG00000024454) #21 HDAC8 (ENSBGRG00000025035) #22 CITED1 (ENSBGRG00000025098) #23 ENSBGRG00000025116 #24 PIN4 (ENSBGRG00000025136) ERCC6L (ENSBGRG00000025193) #25 NHSL2 (ENSBGRG00000025208) #26 ENSBGRG00000025269 #27 ENSBGRG00000025287 #27 ENSBGRG00000025302 #28 ENSBGRG00000025312 CXCR3 (ENSBGRG00000025320) #30 OGT (ENSBGRG00000025338) #31 ENSBGRG00000025461 #33 ENSBGRG00000025796 ITGB1BP2 (ENSBGRG00000025809) #34 NONO (ENSBGRG00000025854) #35 Wild yak MODERN SPECIES 1111 PHKA1 (ENSBMUG00000007877) #21 ENSBMUG00000007798 HDAC8 (ENSBMUG00000007782) #22 SEMA3D (ENSBMUG00000007745) SEMA3A (ENSBMUG00000007717) Bos_b ANCESTRAL SPECIES 12 ENSGT00940000160087 ENSGT00940000163243 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000160311.`c #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00940000163191.a #27 ENSGT00950000182963.b.b #26 ENSGT00940000163191.b.a #27 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Cow MODERN SPECIES 177 ABCB7 (ENSBTAG00000011028) #9 NEXMIF (ENSBTAG00000000300) #10 RLIM (ENSBTAG00000015630) #11 ENSBTAG00000051929 SLC16A2 (ENSBTAG00000002585) #12 ZCCHC13 (ENSBTAG00000032003) #13 CHIC1 (ENSBTAG00000020826) #16 CDX4 (ENSBTAG00000001726) #17 MGC140080 (ENSBTAG00000050059) #20 ENSBTAG00000053104 #20 ENSBTAG00000052491 #19 ENSBTAG00000051474 ENSBTAG00000050902 #19 ENSBTAG00000051767 #21 PHKA1 (ENSBTAG00000015848) #21 HDAC8 (ENSBTAG00000046092) #22 ENSBTAG00000052692 CITED1 (ENSBTAG00000045925) #23 RPS4X (ENSBTAG00000018800) ##24 ERCC6L (ENSBTAG00000005607) #25 PIN4 (ENSBTAG00000047376) NHSL2 (ENSBTAG00000045565) #26 RTL5 (ENSBTAG00000047545) #27 ENSBTAG00000049525 CXCR3 (ENSBTAG00000014798) #30 OGT (ENSBTAG00000000902) #31 ENSBTAG00000006878 #33 ITGB1BP2 (ENSBTAG00000012163) #34 NONO (ENSBTAG00000012152) #35 ZMYM3 (ENSBTAG00000008492) #37 GJB1 (ENSBTAG00000020512) Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005025206 ABCB7 (ENSBIXG00005004343) #9 NEXMIF (ENSBIXG00005025570) #10 RLIM (ENSBIXG00005025624) #11 SLC16A2 (ENSBIXG00005025654) #12 ENSBIXG00005004383 ENSBIXG00005025707 ENSBIXG00005025786 ENSBIXG00005025818 CHIC1 (ENSBIXG00005025937) #16 CDX4 (ENSBIXG00005025966) #17 ENSBIXG00005025997 #20 ENSBIXG00005004436 #19 ENSBIXG00005026017 #19 PHKA1 (ENSBIXG00005006185) #21 HDAC8 (ENSBIXG00005026224) #22 CITED1 (ENSBIXG00005026354) #23 ENSBIXG00005026386 ##24 ERCC6L (ENSBIXG00005026427) #25 PIN4 (ENSBIXG00005026438) RTL5 (ENSBIXG00005026448) #27 NHSL2 (ENSBIXG00005007203) #26 ENSBIXG00005026633 ENSBIXG00005026656 #28 ENSBIXG00005026670 #28 ENSBIXG00005004560 #28 ENSBIXG00005026702 ENSBIXG00005004565 ##24 CXCR3 (ENSBIXG00005026720) #30 OGT (ENSBIXG00005026815) #31 ENSBIXG00005027194 #33 Caprinae ANCESTRAL SPECIES 50 ENSGT00940000163372 #18 ENSGT00940000163063 #20 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.a.b.a ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191.a #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020016579 ENSOARG00020016548 GPR174 (ENSOARG00020016533) ITM2A (ENSOARG00020016499) TBX22 (ENSOARG00020016413) TENT5D (ENSOARG00020016386) BRWD3 (ENSOARG00020015617) HMGN5 (ENSOARG00020015488) ENSOARG00020025731 GLS (ENSOARG00020025702) STAT1 (ENSOARG00020025634) STAT4 (ENSOARG00020025579) ENSOARG00020025556 #19 PHKA1 (ENSOARG00020025431) #21 ENSOARG00020025389 HDAC8 (ENSOARG00020025320) #22 CITED1 (ENSOARG00020025298) #23 ENSOARG00020025291 ##24 ERCC6L (ENSOARG00020025281) #25 PIN4 (ENSOARG00020025228) RTL5 (ENSOARG00020025206) #27 NHSL2 (ENSOARG00020025157) #26 CXCR3 (ENSOARG00020025135) #30 OGT (ENSOARG00020025079) #31 ENSOARG00020024804 #33 ENSOARG00020024762 ENSOARG00020024748 ITGB1BP2 (ENSOARG00020024686) #34 NONO (ENSOARG00020024655) #35 ZMYM3 (ENSOARG00020024506) #37 GJB1 (ENSOARG00020024479) Goat DUPLICATION Goat MODERN SPECIES 29 ENSCHIG00000007957 ENSCHIG00000020141 #33 OGT (ENSCHIG00000001994) #31 ENSCHIG00000003495 CXCR3 (ENSCHIG00000014964) #30 ENSCHIG00000020497 #28 ENSCHIG00000015330 FGF16 (ENSCHIG00000011577) RTL5 (ENSCHIG00000009403) #27 NHSL2 (ENSCHIG00000018552) #26 PIN4 (ENSCHIG00000014397) ERCC6L (ENSCHIG00000009967) #25 ENSCHIG00000023292 #24 CITED1 (ENSCHIG00000019258) #23 PHKA1 (ENSCHIG00000021783) #21 ENSCHIG00000019337 #22 NAP1L2 (ENSCHIG00000016151) #18 ENSCHIG00000020667 #20 ENSCHIG00000006283 #19 CHIC1 (ENSCHIG00000016513) #16 ENSCHIG00000001275 ENSCHIG00000021839 ZCCHC13 (ENSCHIG00000019132) #13 SLC16A2 (ENSCHIG00000015992) #12 RLIM (ENSCHIG00000019610) #11 NEXMIF (ENSCHIG00000014641) #10 ABCB7 (ENSCHIG00000005807) #9 ZDHHC15 (ENSCHIG00000012700) #7 MAGEE2 (ENSCHIG00000007901) HDX (ENSCHIG00000008366) ENSCHIG00000012493 Goat MODERN SPECIES 113 ENSCHIG00000000457 #22 Atlantogenata ANCESTRAL SPECIES 61 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753 #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00940000163063 #20 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Xenarthra ANCESTRAL SPECIES ENSGT00940000157843 #22 Sloth MODERN SPECIES 3857 ENSCHOG00000013561 #22 Afrotheria ANCESTRAL SPECIES 71 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.k #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a Afrotheria_a ANCESTRAL SPECIES 70 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 #7 ENSGT01020000230412.D #8 ENSGT00940000156281 #9 ENSGT00940000159746 #10 ENSGT00940000155753.k #11 ENSGT00940000159450 #12 ENSGT00950000183041.A.f #13 ENSGT00390000003601.a #16 ENSGT00940000162554 #17 ENSGT00940000163372 #18 ENSGT00940000160311 #19 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569.x.b ##24 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000163191 #27 ENSGT00390000015252 #28 ENSGT01050000244848.B.a.b #30 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000159429 #34 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01030000234513.B.a ENSGT00940000159580 Elephant MODERN SPECIES 251 ENSLAFG00000030374 PBDC1 (ENSLAFG00000026665) MAGEE2 (ENSLAFG00000000647) ZDHHC15 (ENSLAFG00000008568) #7 UPRT (ENSLAFG00000004685) #8 ABCB7 (ENSLAFG00000008784) #9 NEXMIF (ENSLAFG00000015430) #10 RLIM (ENSLAFG00000004774) #11 SLC16A2 (ENSLAFG00000004618) #12 ZCCHC13 (ENSLAFG00000029278) #13 CHIC1 (ENSLAFG00000018579) #16 CDX4 (ENSLAFG00000016806) #17 NAP1L2 (ENSLAFG00000026154) #18 ENSLAFG00000023096 #19 PHKA1 (ENSLAFG00000006928) #21 HDAC8 (ENSLAFG00000008515) #22 CITED1 (ENSLAFG00000017528) #23 RPS4X (ENSLAFG00000002654) ##24 ERCC6L (ENSLAFG00000014985) #25 PIN4 (ENSLAFG00000018261) ENSLAFG00000000637 #26 ENSLAFG00000030373 #26 RTL5 (ENSLAFG00000028394) #27 ENSLAFG00000032112 #28 ENSLAFG00000027894 #28 CXCR3 (ENSLAFG00000029972) #30 OGT (ENSLAFG00000008655) #31 ENSLAFG00000001269 #33 ITGB1BP2 (ENSLAFG00000000808) #34 NONO (ENSLAFG00000013422) #35 ZMYM3 (ENSLAFG00000022555) #37 Hyrax MODERN SPECIES 3523 ENSPCAG00000007859 #21 ENSPCAG00000007794 #22 Tenrec MODERN SPECIES 4220 HDAC8 (ENSETEG00000019513) #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000158106 ENSGT00390000006601 ENSGT00390000011709 ENSGT00950000183174.B.b ENSGT00940000156877 ENSGT00940000164962 ENSGT00990000203769 ENSGT00390000013956 ENSGT00940000157039.b ENSGT00390000013700 ENSGT00480000042679.b.b ENSGT00940000155219 ENSGT00940000155454 ENSGT00940000156894 ENSGT00900000143582 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT00940000156743 ENSGT00940000155079.b ENSGT00940000153064.b.b.a.b ENSGT00940000160425 ENSGT00390000001134.a.a ENSGT00390000005954 ENSGT00390000013790 ENSGT00530000063106.C ENSGT00390000015293 ENSGT00940000156711 ENSGT00940000158108 ENSGT00940000158486 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00390000006601 ENSGT00390000011709 ENSGT00950000183174.B.b ENSGT00940000156877 ENSGT00940000164962.a ENSGT00990000203769 ENSGT00390000013956 ENSGT00940000157039.b ENSGT00390000013700 ENSGT00480000042679.b.b ENSGT00940000155219 ENSGT00940000155454 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00900000143582 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT00940000156743 ENSGT00940000155079.b ENSGT00940000160425 ENSGT00390000001134.a.a ENSGT00390000005954 ENSGT00390000013790 ENSGT00530000063106.C ENSGT00390000015293 ENSGT00940000156711 ENSGT00940000158108 ENSGT00940000158486 ENSGT00960000186835 Diprotodontia ANCESTRAL SPECIES 116 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 Diprotodontia_a ANCESTRAL SPECIES 108 ENSGT00940000153700.jc.a.a.b ENSGT00940000156894 ENSGT00940000157843 #22 ENSGT00940000157767 ENSGT00940000181563 ENSGT00940000155487 ENSGT01030000234641.b.a.b.a.a.l ENSGT00940000156743 Common wonbat MODERN SPECIES 1170 ENSVURG00010013219 ENSVURG00010013223 PCDH17 (ENSVURG00010013234) ENSVURG00010013294 ENSVURG00010014148 #22 ENSVURG00010014157 TDRD3 (ENSVURG00010014176) ENSVURG00010014222 PCDH20 (ENSVURG00010014226) koala MODERN SPECIES 114 DIAPH3 (ENSPCIG00000003745) ENSPCIG00000005837 #22 ENSPCIG00000031515 ENSPCIG00000011476 ENSPCIG00000011482 PCDH20 (ENSPCIG00000011484) ENSPCIG00000008133 NUP35 (ENSPCIG00000015482) DUSP19 (ENSPCIG00000015497) NCKAP1 (ENSPCIG00000019118) FRZB (ENSPCIG00000012990) DNAJC10 (ENSPCIG00000023771) PDE1A (ENSPCIG00000014791) ENSPCIG00000014824 PPP1R1C (ENSPCIG00000014830) ITPRID2 (ENSPCIG00000014835) NEUROD1 (ENSPCIG00000014845) Tasmanian devil MODERN SPECIES 2 ENSSHAG00000023806 WBP4 (ENSSHAG00000018027) ENSSHAG00000017887 ENSSHAG00000027194 ENSSHAG00000021232 PCDH8 (ENSSHAG00000024494) OLFM4 (ENSSHAG00000017198) ENSSHAG00000030587 ENSSHAG00000011884 ENSSHAG00000031334 PCDH17 (ENSSHAG00000030397) ENSSHAG00000029234 ENSSHAG00000015066 ENSSHAG00000020824 DIAPH3 (ENSSHAG00000014221) ENSSHAG00000029149 #22 TDRD3 (ENSSHAG00000011994) ENSSHAG00000021559 ENSSHAG00000026280 PCDH20 (ENSSHAG00000003246) ENSSHAG00000024025 PCDH9 (ENSSHAG00000010087) ENSSHAG00000007080 KLHL1 (ENSSHAG00000009888) DACH1 (ENSSHAG00000003702) MZT1 (ENSSHAG00000027921) BORA (ENSSHAG00000015051) DIS3 (ENSSHAG00000015153) PIBF1 (ENSSHAG00000015284) KLF5 (ENSSHAG00000022922) KLF12 (ENSSHAG00000020744) Opossum MODERN SPECIES 6 WBP4 (ENSMODG00000014761) ELF1 (ENSMODG00000014756) SUGT1 (ENSMODG00000014748) CNMD (ENSMODG00000014743) PCDH8 (ENSMODG00000014739) OLFM4 (ENSMODG00000047878) ENSMODG00000014727 ENSMODG00000024964 ENSMODG00000046257 ENSMODG00000044832 ENSMODG00000028702 ENSMODG00000048827 ENSMODG00000044149 ENSMODG00000006412 PCDH17 (ENSMODG00000006409) HDAC8 (ENSMODG00000024915) #22 ENSMODG00000047947 DIAPH3 (ENSMODG00000006363) ENSMODG00000006329 ENSMODG00000024918 PCDH20 (ENSMODG00000006279) ENSMODG00000029389 ENSMODG00000006268 ENSMODG00000043469 ENSMODG00000029077 ENSMODG00000038503 ENSMODG00000024965 ENSMODG00000041893 SPRY2 (ENSMODG00000001592) ENSMODG00000001586 RBM26 (ENSMODG00000001574) Platypus MODERN SPECIES 17 ENSOANG00000014489 ENSOANG00000016041 ENSOANG00000009600 ENSOANG00000001989 ENSOANG00000041690 ENSOANG00000022007 CLCN5 (ENSOANG00000001908) ENSOANG00000049977 AKAP4 (ENSOANG00000013980) ccnb3 (ENSOANG00000013985) ENSOANG00000013986 ENSOANG00000044660 ENSOANG00000046076 ENSOANG00000036938 PHKA1 (ENSOANG00000014323) #21 ENSOANG00000002951 #22 CITED1 (ENSOANG00000002950) #23 ENSOANG00000002949 ##24 NHSL2 (ENSOANG00000045462) #26 ENSOANG00000014709 ERCC6L (ENSOANG00000014708) #25 TSC22D3 (ENSOANG00000037542) ENSOANG00000049514 MID2 (ENSOANG00000014706) OCRL (ENSOANG00000012031) ENSOANG00000042145 XPNPEP2 (ENSOANG00000013312) SASH3 (ENSOANG00000014543) ZDHHC9 (ENSOANG00000007237) ENSOANG00000013483 BCORL1 (ENSOANG00000012035) Sauria ANCESTRAL SPECIES 35 ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 Lepidosauria ANCESTRAL SPECIES 121 ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000156837 #25 ENSGT00510000047029 tuatara DUPLICATION tuatara MODERN SPECIES 44 PHKA1 (ENSSPUG00000015336) #21 ENSSPUG00000015325 #22 ENSSPUG00000015317 #22 tuatara MODERN SPECIES 44 PHKA1 (ENSSPUG00000015336) #21 ENSSPUG00000015325 #22 ENSSPUG00000015317 #22 Episquamata ANCESTRAL SPECIES 14 ENSGT00940000155085.b #31 ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Toxicofera ANCESTRAL SPECIES 17 ENSGT00940000163331 ENSGT00940000155242 #33 ENSGT00940000155085.a.a ##31 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Elapidae ANCESTRAL SPECIES 14 ENSGT00940000155242 #33 ENSGT00940000155085.a.a ##31 ENSGT00940000155085.a.b ##31 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Indian cobra MODERN SPECIES 13 ENSNNAG00000012177 ##31 ENSNNAG00000012200 ##31 ENSNNAG00000012259 ENSNNAG00000012278 ENSNNAG00000012316 ENSNNAG00000012329 KLF8 (ENSNNAG00000012347) ENSNNAG00000012368 CLCN5 (ENSNNAG00000012416) ENSNNAG00000012607 ENSNNAG00000012638 ENSNNAG00000012716 SHROOM4 (ENSNNAG00000013045) BMP15 (ENSNNAG00000013080) PHKA1 (ENSNNAG00000013170) #21 HDAC8 (ENSNNAG00000013867) #22 RPS4X (ENSNNAG00000014136) #24 ENSNNAG00000014178 ENSNNAG00000014194 TSC22D3 (ENSNNAG00000014207) ENSNNAG00000014224 PLP1 (ENSNNAG00000014331) RAB9B (ENSNNAG00000014341) ENSNNAG00000014348 SLC25A53 (ENSNNAG00000014381) ENSNNAG00000014393 ENSNNAG00000014418 DNAAF6 (ENSNNAG00000014433) NUP62 (ENSNNAG00000014445) RBM41 (ENSNNAG00000014468) CLDN2 (ENSNNAG00000014480) Elapidae_a ANCESTRAL SPECIES 46 ENSGT00940000155242 #33 ENSGT00940000155085.a.a ##31 ENSGT00940000155085.a.b ##31 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Acanthophiinae ANCESTRAL SPECIES 45 ENSGT00940000155242 #33 ENSGT00940000155085.a.a ##31 ENSGT00940000155085.a.b ##31 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000158789 ENSGT00390000006915.c.d ENSGT00940000160481 ENSGT00940000161604 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT00390000015219 ENSGT00940000161737 ENSGT00530000063786.b ENSGT00940000160785 ENSGT00940000160946 Mainland tiger snake MODERN SPECIES 222 ENSNSUG00000014187 #33 ENSNSUG00000014317 ##31 ENSNSUG00000014318 ##31 ENSNSUG00000014322 ENSNSUG00000014334 ENSNSUG00000014335 KLF8 (ENSNSUG00000014336) ENSNSUG00000014337 CLCN5 (ENSNSUG00000014339) ENSNSUG00000014340 ENSNSUG00000014341 ENSNSUG00000014342 SHROOM4 (ENSNSUG00000014343) BMP15 (ENSNSUG00000014344) PHKA1 (ENSNSUG00000014345) #21 HDAC8 (ENSNSUG00000018232) #22 RPS4X (ENSNSUG00000018233) #24 ENSNSUG00000018234 ENSNSUG00000018235 TSC22D3 (ENSNSUG00000018236) ENSNSUG00000018237 PLP1 (ENSNSUG00000018238) RAB9B (ENSNSUG00000018239) ENSNSUG00000018240 SLC25A53 (ENSNSUG00000018241) ENSNSUG00000018242 ENSNSUG00000018243 DNAAF6 (ENSNSUG00000018244) NUP62 (ENSNSUG00000018245) ENSNSUG00000018291 CLDN2 (ENSNSUG00000018292) Eastern brown snake MODERN SPECIES 86 ENSPTXG00000007953 ##31 ENSPTXG00000007951 ##31 ENSPTXG00000007946 ENSPTXG00000007943 ENSPTXG00000007939 KLF8 (ENSPTXG00000007937) ENSPTXG00000007935 CLCN5 (ENSPTXG00000007932) ENSPTXG00000007930 ENSPTXG00000007929 ENSPTXG00000007813 ENSPTXG00000007802 ENSPTXG00000007801 BMP15 (ENSPTXG00000007799) ENSPTXG00000007797 #21 HDAC8 (ENSPTXG00000007792) #22 RPS4X (ENSPTXG00000007787) #24 ENSPTXG00000007784 TSC22D3 (ENSPTXG00000007781) ENSPTXG00000007778 PLP1 (ENSPTXG00000007776) RAB9B (ENSPTXG00000007771) ENSPTXG00000007769 SLC25A53 (ENSPTXG00000007768) ENSPTXG00000007766 ENSPTXG00000007764 DNAAF6 (ENSPTXG00000011062) NUP62 (ENSPTXG00000011058) ENSPTXG00000011056 CLDN2 (ENSPTXG00000011055) PRRG3 (ENSPTXG00000011038) Blue-lipped sea krait MODERN SPECIES 264 ENSLLTG00000018139 ENSLLTG00000018138 ENSLLTG00000018135 KLF8 (ENSLLTG00000018134) ENSLLTG00000018132 CLCN5 (ENSLLTG00000018130) ENSLLTG00000018128 ENSLLTG00000018126 ENSLLTG00000018124 SHROOM4 (ENSLLTG00000018122) BMP15 (ENSLLTG00000018121) PHKA1 (ENSLLTG00000008750) #21 HDAC8 (ENSLLTG00000007980) #22 RPS4X (ENSLLTG00000007951) #24 ENSLLTG00000007891 TSC22D3 (ENSLLTG00000007863) ENSLLTG00000007832 PLP1 (ENSLLTG00000007809) RAB9B (ENSLLTG00000007800) ENSLLTG00000007780 SLC25A53 (ENSLLTG00000007755) ENSLLTG00000007733 FRMPD3 (ENSLLTG00000007630) DNAAF6 (ENSLLTG00000007593) ENSLLTG00000007545 RBM41 (ENSLLTG00000007478) CLDN2 (ENSLLTG00000007467) PRRG3 (ENSLLTG00000007453) Lizard MODERN SPECIES 1291 PHKA1 (ENSACAG00000014694) #21 ENSACAG00000014647 #22 RPS4X (ENSACAG00000014601) #24 ENSACAG00000014594 ENSACAG00000026711 ENSACAG00000014362 ENSACAG00000014323 RAB9B (ENSACAG00000014318) ENSACAG00000022310 ENSACAG00000014314 ENSACAG00000044163 ENSACAG00000044864 ENSACAG00000014208 Laterata ANCESTRAL SPECIES 48 ENSGT00940000163331 ENSGT00940000155242.h #33 ENSGT00940000155085.b #31 ENSGT00940000153941.a.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479.g.b ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 Argentine black and white tegu MODERN SPECIES 120 ENSSMRG00000002757 #33 OGT (ENSSMRG00000002756) #31 ENSSMRG00000002752 GLOD5 (ENSSMRG00000002751) ENSSMRG00000002749 ENSSMRG00000002747 KLF8 (ENSSMRG00000002746) ENSSMRG00000002716 CLCN5 (ENSSMRG00000002704) ENSSMRG00000002702 ENSSMRG00000002698 ENSSMRG00000002142 SHROOM4 (ENSSMRG00000002127) BMP15 (ENSSMRG00000002122) PHKA1 (ENSSMRG00000002074) #21 HDAC8 (ENSSMRG00000002072) #22 RPS4X (ENSSMRG00000002071) #24 ENSSMRG00000002068 TSC22D3 (ENSSMRG00000002067) ENSSMRG00000002066 Common wall lizard MODERN SPECIES 1 ATP6V1F (ENSPMRG00000015729) ATP6V1FNB (ENSPMRG00000015731) ENSPMRG00000015732 ENSPMRG00000015750 ENSPMRG00000014031 ENSPMRG00000014046 ENSPMRG00000014060 ENSPMRG00000014072 ENSPMRG00000014078 ENSPMRG00000014085 ENSPMRG00000014092 ENSPMRG00000014098 ENSPMRG00000014111 TYMP (ENSPMRG00000014137) ENSPMRG00000014150 HDAC8 (ENSPMRG00000014158) #22 ENSPMRG00000014166 ENSPMRG00000014182 ENSPMRG00000014188 ENSPMRG00000014193 ENSPMRG00000014200 ENSPMRG00000014215 ENSPMRG00000014221 ENSPMRG00000014227 ENSPMRG00000014248 ENSPMRG00000014260 ENSPMRG00000014276 ENSPMRG00000014283 ENSPMRG00000014298 ENSPMRG00000014315 ENSPMRG00000014324 Archelosauria ANCESTRAL SPECIES 37 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b #26 ENSGT00510000047029 ENSGT00940000156837 #25 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 ENSGT00940000153737.a Cryptodira ANCESTRAL SPECIES 64 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00940000165959 ENSGT00940000156656 Testudinoidea ANCESTRAL SPECIES 9 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b #26 ENSGT00510000047029 ENSGT00940000156837 #25 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Emydidae ANCESTRAL SPECIES 80 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 Three-toed box turtle MODERN SPECIES 78 ENSTMTG00000003850 FUNDC2 (ENSTMTG00000003876) CMC4 (ENSTMTG00000003892) ENSTMTG00000003907 BRCC3 (ENSTMTG00000003923) ENSTMTG00000003944 FAAH2 (ENSTMTG00000003959) CLIC2 (ENSTMTG00000003992) ENSTMTG00000004008 ENSTMTG00000004036 ENSTMTG00000004074 SHROOM4 (ENSTMTG00000004094) BMP15 (ENSTMTG00000004142) ENSTMTG00000004162 PHKA1 (ENSTMTG00000004183) #21 HDAC8 (ENSTMTG00000004377) #22 CITED1 (ENSTMTG00000004441) #23 ENSTMTG00000004457 #24 ENSTMTG00000004473 ENSTMTG00000004493 ENSTMTG00000004531 TSC22D3 (ENSTMTG00000004545) ENSTMTG00000004563 ENSTMTG00000004574 painted turtle MODERN SPECIES 952 ENSCPBG00000010502 ENSCPBG00000010507 ENSCPBG00000010515 CLCN5 (ENSCPBG00000010518) ENSCPBG00000010523 ENSCPBG00000010530 ENSCPBG00000010568 SHROOM4 (ENSCPBG00000010610) BMP15 (ENSCPBG00000010614) ENSCPBG00000010620 PHKA1 (ENSCPBG00000010626) #21 HDAC8 (ENSCPBG00000010643) #22 CITED1 (ENSCPBG00000010654) #23 Testudinidae ANCESTRAL SPECIES 7 ENSGT00940000160294.g ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406.c ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00680000100018.b ENSGT00940000165959 ENSGT00940000156656 ENSGT00940000159460 ENSGT00950000182963.b.b #26 ENSGT00510000047029.lb ENSGT00940000156837 #25 ENSGT00940000157996 ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00390000008142 Goode s thornscrub tortoise MODERN SPECIES 23 CMC4 (ENSGEVG00005010035) ENSGEVG00005010057 BRCC3 (ENSGEVG00005010091) ENSGEVG00005010120 ENSGEVG00005010159 FAAH2 (ENSGEVG00005010178) CLIC2 (ENSGEVG00005010209) ENSGEVG00005010237 ENSGEVG00005010279 ENSGEVG00005010309 ENSGEVG00005010412 SHROOM4 (ENSGEVG00005010602) BMP15 (ENSGEVG00005010648) ENSGEVG00005010703 PHKA1 (ENSGEVG00005010749) #21 HDAC8 (ENSGEVG00005010859) #22 CITED1 (ENSGEVG00005010918) #23 ENSGEVG00005010955 #24 ENSGEVG00005011001 ENSGEVG00005011050 TSC22D3 (ENSGEVG00005011470) MID2 (ENSGEVG00005011510) ENSGEVG00005011656 ENSGEVG00005011663 ENSGEVG00005011711 NHSL2 (ENSGEVG00005011745) #26 PIN4 (ENSGEVG00005011770) ERCC6L (ENSGEVG00005011791) #25 OCRL (ENSGEVG00005011844) APLN (ENSGEVG00005011967) XPNPEP2 (ENSGEVG00005012005) Abingdon island giant tortoise MODERN SPECIES 1614 SHROOM4 (ENSCABG00000005517) BMP15 (ENSCABG00000005520) ENSCABG00000005522 PHKA1 (ENSCABG00000005671) #21 HDAC8 (ENSCABG00000013704) #22 CITED1 (ENSCABG00000013744) #23 ENSCABG00000013746 #24 ENSCABG00000013748 ENSCABG00000013751 TSC22D3 (ENSCABG00000013754) Chinese turtle MODERN SPECIES 1190 ENSPSIG00000005007 PHKA1 (ENSPSIG00000004468) #21 HDAC8 (ENSPSIG00000004293) #22 ENSPSIG00000001106 ENSPSIG00000004146 #24 ENSPSIG00000013897 TSC22D3 (ENSPSIG00000013883) Archosauria ANCESTRAL SPECIES 15 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885 ENSGT00390000000360 ENSGT00530000063484.b.a ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 ENSGT00440000040163 ENSGT00940000155085.b #31 ENSGT00940000155242 #33 ENSGT00940000163331 ENSGT00940000159429 #34 ENSGT00940000167446 ENSGT00940000154442 #35 ENSGT00940000160693 #37 ENSGT01050000244864.B.a ENSGT01030000234513.B.a ENSGT01030000235750 ENSGT00940000159580 ENSGT00440000037505.b Aves ANCESTRAL SPECIES 53 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 Neognathae ANCESTRAL SPECIES 43 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 Neognathae_b ANCESTRAL SPECIES ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000185662 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #23 ENSGT00390000005569 #24 Golden eagle MODERN SPECIES 13 OCRL (ENSACCG00020007957) ERCC6L (ENSACCG00020007987) #25 PIN4 (ENSACCG00020007996) NHSL2 (ENSACCG00020008013) #26 MID2 (ENSACCG00020008030) TSC22D3 (ENSACCG00020008038) FAAH2 (ENSACCG00020008047) CLIC2 (ENSACCG00020008060) ENSACCG00020008070 ENSACCG00020008081 ENSACCG00020008150 ENSACCG00020008249 BMP15 (ENSACCG00020008263) ENSACCG00020008278 PHKA1 (ENSACCG00020008294) #21 HDAC8 (ENSACCG00020008308) #22 CITED1 (ENSACCG00020008318) #23 ENSACCG00020008328 #24 Kakapo MODERN SPECIES 1 OCRL (ENSSHBG00005015422) ERCC6L (ENSSHBG00005015409) #25 PIN4 (ENSSHBG00005015400) NHSL2 (ENSSHBG00005015388) #26 MID2 (ENSSHBG00005015376) TSC22D3 (ENSSHBG00005015369) FAAH2 (ENSSHBG00005015351) ENSSHBG00005015340 CLIC2 (ENSSHBG00005015331) ENSSHBG00005015319 ENSSHBG00005015309 ENSSHBG00005015296 SHROOM4 (ENSSHBG00005015278) BMP15 (ENSSHBG00005015271) ENSSHBG00005015268 HDAC8 (ENSSHBG00005015260) #22 ENSSHBG00005015247 MBLAC1 (ENSSHBG00005015236) ENSSHBG00005015221 ENSSHBG00005015212 ENSSHBG00005015203 ENSSHBG00005015155 ENSSHBG00005015124 ENSSHBG00005015118 SHF (ENSSHBG00005015109) ENSSHBG00005015091 ALPK3 (ENSSHBG00005015050) ENSSHBG00005015021 ZNF592 (ENSSHBG00005015004) SEC11A (ENSSHBG00005014989) NMB (ENSSHBG00005014981) Passeriformes ANCESTRAL SPECIES 30 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00870000136493.c ENSGT00520000055620.B.f Great tit MODERN SPECIES 24 ENSPMJG00000012321 OCRL (ENSPMJG00000012320) ENSPMJG00000012319 ERCC6L (ENSPMJG00000012318) #25 NHSL2 (ENSPMJG00000012317) #26 ENSPMJG00000012315 TSC22D3 (ENSPMJG00000012313) FAAH2 (ENSPMJG00000012311) CLIC2 (ENSPMJG00000012309) ENSPMJG00000012308 ENSPMJG00000012307 ENSPMJG00000012306 SHROOM4 (ENSPMJG00000012305) BMP15 (ENSPMJG00000012304) PHKA1 (ENSPMJG00000012303) #21 HDAC8 (ENSPMJG00000012298) #22 ENSPMJG00000012297 #24 ENSPMJG00000012296 ENSPMJG00000012295 ENSPMJG00000012294 GLOD5 (ENSPMJG00000012288) ENSPMJG00000012287 ENSPMJG00000012285 ENSPMJG00000012284 ENSPMJG00000012283 CETN1 (ENSPMJG00000012282) NSDHL (ENSPMJG00000012281) ENSPMJG00000012278 ENSPMJG00000012277 VAMP7 (ENSPMJG00000012276) POLR1D (ENSPMJG00000012275) Passeriformes_d DUPLICATION Passeriformes_d ANCESTRAL SPECIES ENSGT00940000157843.k #22 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000157843.k #22 Passeroidea ANCESTRAL SPECIES ENSGT00940000157843.k #22 Common canary MODERN SPECIES 13 ENSSCAG00000015946 OCRL (ENSSCAG00000015941) ERCC6L (ENSSCAG00000015935) #25 ENSSCAG00000015934 NHSL2 (ENSSCAG00000015933) #26 MID2 (ENSSCAG00000015931) TSC22D3 (ENSSCAG00000015927) FAAH2 (ENSSCAG00000015920) CLIC2 (ENSSCAG00000015914) ENSSCAG00000015904 ENSSCAG00000015900 ENSSCAG00000015879 SHROOM4 (ENSSCAG00000015867) BMP15 (ENSSCAG00000015864) PHKA1 (ENSSCAG00000015256) #21 ENSSCAG00000014924 #22 ENSSCAG00000014919 #22 RPS4X (ENSSCAG00000014912) #24 ENSSCAG00000014907 ENSSCAG00000014895 Passeriformes_d ANCESTRAL SPECIES 31 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #24 ENSGT00870000136493.c ENSGT00520000055620.B.f Passeriformes_g ANCESTRAL SPECIES 23 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #24 ENSGT00870000136493.c ENSGT00520000055620.B.f Passeroidea ANCESTRAL SPECIES 25 ENSGT01010000223486 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.l #22 ENSGT00390000005569 #24 ENSGT00870000136493.c ENSGT00520000055620.B.f Common canary MODERN SPECIES 13 OCRL (ENSSCAG00000015941) ERCC6L (ENSSCAG00000015935) #25 ENSSCAG00000015934 NHSL2 (ENSSCAG00000015933) #26 MID2 (ENSSCAG00000015931) TSC22D3 (ENSSCAG00000015927) FAAH2 (ENSSCAG00000015920) CLIC2 (ENSSCAG00000015914) ENSSCAG00000015904 ENSSCAG00000015900 ENSSCAG00000015879 SHROOM4 (ENSSCAG00000015867) BMP15 (ENSSCAG00000015864) PHKA1 (ENSSCAG00000015256) #21 ENSSCAG00000014924 #22 ENSSCAG00000014919 #22 RPS4X (ENSSCAG00000014912) #24 ENSSCAG00000014907 ENSSCAG00000014895 Zebra finch MODERN SPECIES 26 ENSTGUG00000021007 OCRL (ENSTGUG00000004995) ERCC6L (ENSTGUG00000004992) #25 PIN4 (ENSTGUG00000004983) NHSL2 (ENSTGUG00000020851) #26 MID2 (ENSTGUG00000004946) TSC22D3 (ENSTGUG00000019242) FAAH2 (ENSTGUG00000004933) CLIC2 (ENSTGUG00000004925) ENSTGUG00000004918 ENSTGUG00000004916 ENSTGUG00000004878 SHROOM4 (ENSTGUG00000020543) BMP15 (ENSTGUG00000004869) PHKA1 (ENSTGUG00000004827) #21 HDAC8 (ENSTGUG00000004801) #22 RPS4X (ENSTGUG00000022503) #24 ENSTGUG00000019393 ENSTGUG00000022518 ENSTGUG00000004773 SLITRK4 (ENSTGUG00000004770) SLITRK2 (ENSTGUG00000004763) TSSK2 (ENSTGUG00000004761) FMR1 (ENSTGUG00000004735) AFF2 (ENSTGUG00000004690) IDS (ENSTGUG00000004678) ENSTGUG00000004664 TMEM185A (ENSTGUG00000004667) MAMLD1 (ENSTGUG00000004663) MTM1 (ENSTGUG00000004636) MTMR1 (ENSTGUG00000004586) Medium ground finch MODERN SPECIES 207 ZDHHC9 (ENSGFOG00000009657) SASH3 (ENSGFOG00000009662) XPNPEP2 (ENSGFOG00000009669) OCRL (ENSGFOG00000009692) ERCC6L (ENSGFOG00000009722) #25 PIN4 (ENSGFOG00000009727) NHSL2 (ENSGFOG00000009734) #26 TSC22D3 (ENSGFOG00000009772) FAAH2 (ENSGFOG00000009781) CLIC2 (ENSGFOG00000009791) ENSGFOG00000009797 ENSGFOG00000009859 ENSGFOG00000010505 BMP15 (ENSGFOG00000010506) PHKA1 (ENSGFOG00000010596) #21 HDAC8 (ENSGFOG00000012576) #22 RPS4X (ENSGFOG00000012590) #24 RPGRIP1L (ENSGFOG00000012601) Flycatcher MODERN SPECIES 23 OCRL (ENSFALG00000011786) ERCC6L (ENSFALG00000011797) #25 ENSFALG00000026660 NHSL2 (ENSFALG00000028263) #26 ENSFALG00000011839 ENSFALG00000026828 ENSFALG00000024783 ENSFALG00000027784 CLIC2 (ENSFALG00000028179) ENSFALG00000011899 ENSFALG00000011907 ENSFALG00000011916 ENSFALG00000027491 BMP15 (ENSFALG00000011933) PHKA1 (ENSFALG00000011955) #21 ENSFALG00000011987 #22 RPS4X (ENSFALG00000023514) #24 Galloanserae ANCESTRAL SPECIES 43 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 Anatidae ANCESTRAL SPECIES 78 ENSGT00390000014020 ENSGT00940000157996.a ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 Duck MODERN SPECIES 1 ZDHHC9 (ENSAPLG00000013343) SASH3 (ENSAPLG00000019773) ENSAPLG00000022336 ENSAPLG00000014140 ENSAPLG00000020162 NHSL2 (ENSAPLG00000022721) #26 MID2 (ENSAPLG00000015609) FAAH2 (ENSAPLG00000016066) CLIC2 (ENSAPLG00000000963) ENSAPLG00000001287 ENSAPLG00000002443 ENSAPLG00000002561 ENSAPLG00000016924 BMP15 (ENSAPLG00000017130) PHKA1 (ENSAPLG00000005017) #21 HDAC8 (ENSAPLG00000006408) #22 ENSAPLG00000025640 ENSAPLG00000010479 GABRA3 (ENSAPLG00000010123) ENSAPLG00000009273 CNGA2 (ENSAPLG00000009170) ENSAPLG00000022903 PRRG3 (ENSAPLG00000009043) MORC4 (ENSAPLG00000008858) NUP62 (ENSAPLG00000008575) DNAAF6 (ENSAPLG00000008516) FRMPD3 (ENSAPLG00000022824) ENSAPLG00000017528 RAB9B (ENSAPLG00000001949) PLP1 (ENSAPLG00000010958) ENSAPLG00000010996 Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00530000063786.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161604 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000158789 ENSGT00390000008751.b ENSGT00940000161656 ENSGT00940000158469.g.a ENSGT00940000154661 ENSGT00940000164465 Japanese quail MODERN SPECIES 22 SASH3 (ENSCJPG00005004900) APLN (ENSCJPG00005004921) OCRL (ENSCJPG00005004923) ERCC6L (ENSCJPG00005005464) #25 PIN4 (ENSCJPG00005005465) NHSL2 (ENSCJPG00005005468) #26 MID2 (ENSCJPG00005005485) TSC22D3 (ENSCJPG00005005573) ENSCJPG00005005574 FAAH2 (ENSCJPG00005005575) CLIC2 (ENSCJPG00005005592) ENSCJPG00005005596 ENSCJPG00005005742 BMP15 (ENSCJPG00005005745) PHKA1 (ENSCJPG00005005760) #21 HDAC8 (ENSCJPG00005010432) #22 RBM41 (ENSCJPG00005010433) ENSCJPG00005010434 #24 NUP62 (ENSCJPG00005010435) DNAAF6 (ENSCJPG00005010512) FRMPD3 (ENSCJPG00005010513) ENSCJPG00005010514 ENSCJPG00005010515 RAB9B (ENSCJPG00005010516) PLP1 (ENSCJPG00005010517) ENSCJPG00005010521 GLA (ENSCJPG00005010522) RPL36AL (ENSCJPG00005010523) BTK (ENSCJPG00005010524) TIMM8A (ENSCJPG00005010658) ENSCJPG00005010659 Phasianidae_b ANCESTRAL SPECIES 24 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000156837 #25 ENSGT00510000047029 ENSGT00950000182963.b.b #26 ENSGT00940000159460 ENSGT00940000156656 ENSGT00940000162502 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569 #24 ENSGT00530000063786.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161604 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000158789 ENSGT00390000008751.b ENSGT00940000161656 ENSGT00940000158469.g.a ENSGT00940000154661 ENSGT00940000164465 Turkey MODERN SPECIES 29 ENSMGAG00000009418 ENSMGAG00000017712 GLA (ENSMGAG00000009492) ENSMGAG00000009484 ENSMGAG00000009503 RAB9B (ENSMGAG00000009570) PLP1 (ENSMGAG00000009552) ENSMGAG00000018934 ENSMGAG00000009574 ENSMGAG00000020195 ENSMGAG00000009609 ENSMGAG00000018624 ENSMGAG00000009625 ENSMGAG00000009671 #24 ENSMGAG00000009663 ENSMGAG00000009681 #22 ENSMGAG00000009697 #21 ENSMGAG00000009744 ENSMGAG00000021329 ENSMGAG00000017155 ENSMGAG00000009789 ENSMGAG00000009749 ENSMGAG00000002151 ENSMGAG00000002159 ENSMGAG00000016690 ENSMGAG00000016264 ENSMGAG00000017429 ENSMGAG00000018542 ENSMGAG00000020199 ENSMGAG00000002096 #26 ENSMGAG00000002094 #25 Chicken MODERN SPECIES 33 PIN4 (ENSGALG00010015158) NHSL2 (ENSGALG00010015171) #26 MID2 (ENSGALG00010015498) ENSGALG00010014578 TSC22D4 (ENSGALG00010014603) ENSGALG00010015108 ENSGALG00010015110 CLIC2 (ENSGALG00010015145) EVA1CL (ENSGALG00010015298) CCNB3 (ENSGALG00010015390) DGKK (ENSGALG00010015422) ENSGALG00010016712 ENSGALG00010019975 BMP15 (ENSGALG00010016722) PHKA1 (ENSGALG00010016292) #21 HDAC8 (ENSGALG00010016310) #22 RPS4Y1 (ENSGALG00010016315) #24 RBM41 (ENSGALG00010016319) NUP62 (ENSGALG00010016362) DNAAF6 (ENSGALG00010016372) FRMPD3 (ENSGALG00010016377) ENSGALG00010016400 TMSB15B (ENSGALG00010016412) RAB9B (ENSGALG00010016473) PLP1 (ENSGALG00010016496) ENSGALG00010016173 GLA (ENSGALG00010015927) RPL36AL (ENSGALG00010015936) BTK (ENSGALG00010015975) TIMM8A (ENSGALG00010015985) ENSGALG00010015994 African ostrich MODERN SPECIES 922 PHKA1 (ENSSCUG00000016466) #21 HDAC8 (ENSSCUG00000016461) #22 ENSSCUG00000016456 #24