Eutheria ANCESTRAL SPECIES 16 ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b #25 ENSGT00390000005569.x.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Primates ANCESTRAL SPECIES 19 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g ##31 ENSGT00390000015252.h #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000165171 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00390000015252.h #31 ENSGT00390000015252.g ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Cebidae ANCESTRAL SPECIES 18 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333.s.a ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000165171 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00390000015252.h #31 ENSGT00390000015252.g ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Cebidae_a ANCESTRAL SPECIES 143 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 Bolivian squirrel monkey MODERN SPECIES 255 PHKA1 (ENSSBOG00000025021) #21 HDAC8 (ENSSBOG00000025932) #22 ENSSBOG00000004798 #23 CITED1 (ENSSBOG00000016010) #24 ENSSBOG00000024943 #25 PIN4 (ENSSBOG00000026467) #26 ERCC6L (ENSSBOG00000029416) #27 NHSL2 (ENSSBOG00000024555) #28 ENSSBOG00000028108 #29 ENSSBOG00000029281 #30 ENSSBOG00000030907 #31 Capuchin MODERN SPECIES 644 HDAC8 (ENSCCAG00000026098) #22 CITED1 (ENSCCAG00000035860) #24 RPS4X (ENSCCAG00000026154) ##25 ERCC6L (ENSCCAG00000023790) #27 ENSCCAG00000018203 #26 NHSL2 (ENSCCAG00000029553) #28 Marmoset MODERN SPECIES 78 ENSCJAG00000067434 ENSCJAG00000044335 CHIC1 (ENSCJAG00000016436) CDX4 (ENSCJAG00000011367) ENSCJAG00000070896 ENSCJAG00000073630 ENSCJAG00000071801 ENSCJAG00000084463 ENSCJAG00000074437 ENSCJAG00000081881 ENSCJAG00000073913 ENSCJAG00000069950 ENSCJAG00000079778 ENSCJAG00000000229 PHKA1 (ENSCJAG00000004244) #21 HDAC8 (ENSCJAG00000004217) #22 ENSCJAG00000081431 ENSCJAG00000058709 CITED1 (ENSCJAG00000004200) #24 RPS4X (ENSCJAG00000004192) ##25 ERCC6L (ENSCJAG00000022332) #27 ENSCJAG00000074350 ENSCJAG00000004992 ##26 RTL5 (ENSCJAG00000064303) NHSL2 (ENSCJAG00000005012) #28 ENSCJAG00000084928 ENSCJAG00000086496 #31 ENSCJAG00000032034 #31 ENSCJAG00000032793 ##31 CXCR3 (ENSCJAG00000006395) ENSCJAG00000031514 Mas night monkey MODERN SPECIES 1018 ENSANAG00000024569 ENSANAG00000032031 PHKA1 (ENSANAG00000023223) #21 ENSANAG00000024193 HDAC8 (ENSANAG00000030857) #22 CITED1 (ENSANAG00000022811) #24 ENSANAG00000026660 ##25 PIN4 (ENSANAG00000030057) #26 ERCC6L (ENSANAG00000022378) #27 NHSL2 (ENSANAG00000027692) #28 CXCR3 (ENSANAG00000029785) ENSANAG00000003202 Catarrhini ANCESTRAL SPECIES 12 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e ##26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Hominoidea ANCESTRAL SPECIES 16 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00940000165171 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.g.b ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00940000165171 ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.g.b ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000163063 ENSGT00940000165171 ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.g.b ##31 ENSGT00390000015252.h.a #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000165171.a ENSGT00940000165171.b ENSGT00410000029400.a ENSGT00410000029400.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h.a #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b Pan ANCESTRAL SPECIES 6 ENSGT00940000156154.b ENSGT00940000158214 ENSGT00940000155268.f.b.a.a.a ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.d.a #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.h.a #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m Bonobo MODERN SPECIES 369 UPRT (ENSPPAG00000035587) ABCB7 (ENSPPAG00000031273) NEXMIF (ENSPPAG00000015470) RLIM (ENSPPAG00000027958) SLC16A2 (ENSPPAG00000038613) ENSPPAG00000030864 ENSPPAG00000029442 ENSPPAG00000009768 CHIC1 (ENSPPAG00000038543) ENSPPAG00000038434 CDX4 (ENSPPAG00000036922) ENSPPAG00000035410 ENSPPAG00000012920 ENSPPAG00000042207 PHKA1 (ENSPPAG00000042021) #21 HDAC8 (ENSPPAG00000023056) #22 CITED1 (ENSPPAG00000037425) #24 ENSPPAG00000039737 #25 ERCC6L (ENSPPAG00000031861) #27 PIN4 (ENSPPAG00000035593) #26 ENSPPAG00000026409 NHSL2 (ENSPPAG00000037776) #28 ENSPPAG00000030502 #31 ENSPPAG00000029254 ##31 CXCR3 (ENSPPAG00000042300) ENSPPAG00000041492 OGT (ENSPPAG00000030832) ENSPPAG00000027775 ENSPPAG00000017119 ENSPPAG00000039421 TAF1 (ENSPPAG00000009193) Chimpanzee MODERN SPECIES 972 RLIM (ENSPTRG00000022037) SLC16A2 (ENSPTRG00000022036) ENSPTRG00000052595 ENSPTRG00000047834 ENSPTRG00000049646 ENSPTRG00000049815 CHIC1 (ENSPTRG00000028250) ENSPTRG00000051207 CDX4 (ENSPTRG00000022032) ENSPTRG00000043791 ENSPTRG00000028252 ENSPTRG00000050068 ENSPTRG00000048543 ENSPTRG00000045935 PHKA1 (ENSPTRG00000022029) #21 HDAC8 (ENSPTRG00000051531) #22 CITED1 (ENSPTRG00000022026) #24 RPS4X (ENSPTRG00000022025) #25 ERCC6L (ENSPTRG00000022023) #27 PIN4 (ENSPTRG00000049495) #26 RTL5 (ENSPTRG00000039375) NHSL2 (ENSPTRG00000028255) #28 ENSPTRG00000050221 #31 ENSPTRG00000044432 ##31 ENSPTRG00000046702 #31 ENSPTRG00000047794 ##31 CXCR3 (ENSPTRG00000022018) GCNA (ENSPTRG00000022017) OGT (ENSPTRG00000049301) ENSPTRG00000045772 ENSPTRG00000044195 Human MODERN SPECIES 1827 RLIM (ENSG00000131263) SLC16A2 (ENSG00000147100) ZCCHC13 (ENSG00000187969) CHIC1 (ENSG00000204116) CDX4 (ENSG00000131264) NAP1L2 (ENSG00000186462) PABPC1L2A (ENSG00000186288) PABPC1L2B (ENSG00000184388) FAM236A (ENSG00000275520) FAM236C (ENSG00000283594) DMRTC1 (ENSG00000269502) FAM236D (ENSG00000225396) FAM236B (ENSG00000268994) DMRTC1B (ENSG00000184911) PHKA1 (ENSG00000067177) #21 HDAC8 (ENSG00000147099) #22 ENSG00000285547 CITED1 (ENSG00000125931) #24 RPS4X (ENSG00000198034) ##25 ERCC6L (ENSG00000186871) #27 PIN4 (ENSG00000102309) #26 RTL5 (ENSG00000242732) NHSL2 (ENSG00000204131) #28 CXorf49B (ENSG00000215113) ##31 CXorf49 (ENSG00000215115) ##31 ENSG00000283599 #31 CXCR3 (ENSG00000186810) GCNA (ENSG00000147174) OGT (ENSG00000147162) TAF1 (ENSG00000147133) ITGB1BP2 (ENSG00000147166) Gorilla MODERN SPECIES 523 ENSGGOG00000043038 ENSGGOG00000006280 CHIC1 (ENSGGOG00000010930) ENSGGOG00000037536 CDX4 (ENSGGOG00000005465) ENSGGOG00000041141 NAP1L2 (ENSGGOG00000026343) ENSGGOG00000043933 ENSGGOG00000038606 ENSGGOG00000013219 ENSGGOG00000026191 ENSGGOG00000001463 ENSGGOG00000039205 ENSGGOG00000024429 PHKA1 (ENSGGOG00000006781) #21 HDAC8 (ENSGGOG00000011587) #22 CITED1 (ENSGGOG00000000290) #24 ENSGGOG00000023079 #25 ERCC6L (ENSGGOG00000022367) #27 PIN4 (ENSGGOG00000016008) ##26 RTL5 (ENSGGOG00000037617) NHSL2 (ENSGGOG00000012481) #28 ENSGGOG00000039791 ##31 ENSGGOG00000026973 #31 ENSGGOG00000039521 ##31 CXCR3 (ENSGGOG00000014881) ENSGGOG00000014876 OGT (ENSGGOG00000014867) ENSGGOG00000036906 ENSGGOG00000039493 ENSGGOG00000039675 Orangutan MODERN SPECIES 242 ABCB7 (ENSPPYG00000020483) NEXMIF (ENSPPYG00000020482) RLIM (ENSPPYG00000020481) SLC16A2 (ENSPPYG00000020479) ENSPPYG00000040239 ZCCHC13 (ENSPPYG00000020478) ENSPPYG00000020475 CHIC1 (ENSPPYG00000020473) CDX4 (ENSPPYG00000020472) NAP1L2 (ENSPPYG00000020470) ENSPPYG00000020468 ENSPPYG00000030199 ENSPPYG00000020466 ENSPPYG00000030578 PHKA1 (ENSPPYG00000020465) #21 HDAC8 (ENSPPYG00000020464) #22 CITED1 (ENSPPYG00000032934) #24 RPS4X (ENSPPYG00000020462) ##25 ERCC6L (ENSPPYG00000020461) #27 PIN4 (ENSPPYG00000020460) #26 RTL5 (ENSPPYG00000041447) NHSL2 (ENSPPYG00000020459) #28 ENSPPYG00000035100 ##31 ENSPPYG00000035498 #31 ENSPPYG00000020909 ##31 CXCR3 (ENSPPYG00000020458) GCNA (ENSPPYG00000020457) OGT (ENSPPYG00000020456) TAF1 (ENSPPYG00000020453) ITGB1BP2 (ENSPPYG00000020452) NONO (ENSPPYG00000020451) Gibbon MODERN SPECIES 449 ABCB7 (ENSNLEG00000001065) NEXMIF (ENSNLEG00000001059) RLIM (ENSNLEG00000001050) ENSNLEG00000001044 ENSNLEG00000030978 CHIC1 (ENSNLEG00000033690) ENSNLEG00000034883 CDX4 (ENSNLEG00000001025) NAP1L2 (ENSNLEG00000019044) ENSNLEG00000018128 ENSNLEG00000029617 ENSNLEG00000034046 ENSNLEG00000029049 ENSNLEG00000018125 PHKA1 (ENSNLEG00000018124) #21 HDAC8 (ENSNLEG00000018123) #22 CITED1 (ENSNLEG00000018122) #24 ENSNLEG00000018121 #25 ERCC6L (ENSNLEG00000036284) #27 PIN4 (ENSNLEG00000036320) #26 ENSNLEG00000018852 RTL5 (ENSNLEG00000018851) NHSL2 (ENSNLEG00000018118) #28 ENSNLEG00000001121 ##31 ENSNLEG00000029115 #31 CXCR3 (ENSNLEG00000001116) ENSNLEG00000036058 OGT (ENSNLEG00000001038) ENSNLEG00000032518 ENSNLEG00000030598 TAF1 (ENSNLEG00000000934) Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400.e ENSGT00940000165171 ENSGT00410000029400.f ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ##26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00530000063666.a.m.a.a.b ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400.e ENSGT00410000029400.f ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Vervet Monkey MODERN SPECIES 203 ZDHHC15 (ENSCSAG00000010880) UPRT (ENSCSAG00000010895) ABCB7 (ENSCSAG00000010981) NEXMIF (ENSCSAG00000011002) RLIM (ENSCSAG00000011014) SLC16A2 (ENSCSAG00000011031) ZCCHC13 (ENSCSAG00000000095) ENSCSAG00000000097 ENSCSAG00000011040 CHIC1 (ENSCSAG00000011042) CDX4 (ENSCSAG00000011047) NAP1L2 (ENSCSAG00000000099) ENSCSAG00000000102 ENSCSAG00000011069 PHKA1 (ENSCSAG00000011091) #21 HDAC8 (ENSCSAG00000011100) #22 CITED1 (ENSCSAG00000011106) #24 ENSCSAG00000011155 ##25 ERCC6L (ENSCSAG00000011173) #27 NHSL2 (ENSCSAG00000011202) #28 RTL5 (ENSCSAG00000000104) ENSCSAG00000011207 ##31 ENSCSAG00000011211 ##31 CXCR3 (ENSCSAG00000011214) OGT (ENSCSAG00000011228) ENSCSAG00000011236 TAF1 (ENSCSAG00000011320) ITGB1BP2 (ENSCSAG00000011356) ENSCSAG00000011364 ENSCSAG00000011368 ZMYM3 (ENSCSAG00000011407) Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000156281.i ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Macaca ANCESTRAL SPECIES 13 ENSGT00940000158214 ENSGT00940000155266.lb ENSGT01020000230412.D ENSGT00940000156281.i ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 Pig-tailed macaque MODERN SPECIES 337 ENSMNEG00000037004 ENSMNEG00000029054 ENSMNEG00000004008 ENSMNEG00000036085 PHKA1 (ENSMNEG00000038795) #21 HDAC8 (ENSMNEG00000033648) #22 CITED1 (ENSMNEG00000032803) #24 ENSMNEG00000012820 ##25 ERCC6L (ENSMNEG00000030867) #27 ENSMNEG00000033596 ##26 RTL5 (ENSMNEG00000037520) NHSL2 (ENSMNEG00000040254) #28 Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000154465.C.p ENSGT00940000158214 ENSGT00940000155266.lb ENSGT01020000230412.D ENSGT00940000156281.i ENSGT00940000159746 ENSGT00940000155753.g ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00910000147593 ENSGT00940000154606.`c.b ENSGT00940000155242.m Rhesus MODERN SPECIES 327 ENSMMUG00000010418 ZCCHC13 (ENSMMUG00000053524) ENSMMUG00000064792 ENSMMUG00000063858 ENSMMUG00000051178 CHIC1 (ENSMMUG00000023236) CDX4 (ENSMMUG00000013449) NAP1L2 (ENSMMUG00000004793) ENSMMUG00000009740 ENSMMUG00000039929 ENSMMUG00000053182 ENSMMUG00000059926 ENSMMUG00000057710 ENSMMUG00000055457 PHKA1 (ENSMMUG00000007593) #21 CITED1 (ENSMMUG00000003296) #22 RPS4X (ENSMMUG00000003295) #25 ERCC6L (ENSMMUG00000012957) #27 PIN4 (ENSMMUG00000055786) ##26 RTL5 (ENSMMUG00000059483) NHSL2 (ENSMMUG00000021924) #28 ENSMMUG00000014885 #31 ENSMMUG00000017783 ##31 CXCR3 (ENSMMUG00000032424) GCNA (ENSMMUG00000011469) OGT (ENSMMUG00000015238) ENSMMUG00000056450 ENSMMUG00000048382 TAF1 (ENSMMUG00000005663) ENSMMUG00000054587 ITGB1BP2 (ENSMMUG00000020479) Crab-eating macaque MODERN SPECIES 175 CHIC1 (ENSMFAG00000011399) ENSMFAG00000044694 ENSMFAG00000057332 ENSMFAG00000057045 CDX4 (ENSMFAG00000053268) NAP1L2 (ENSMFAG00000003271) ENSMFAG00000062023 ENSMFAG00000062898 ENSMFAG00000054792 ENSMFAG00000048150 ENSMFAG00000034324 ENSMFAG00000051621 ENSMFAG00000039331 ENSMFAG00000007994 PHKA1 (ENSMFAG00000038543) #21 HDAC8 (ENSMFAG00000003160) #22 ENSMFAG00000038135 ##25 ERCC6L (ENSMFAG00000045509) #27 PIN4 (ENSMFAG00000043832) ##26 NHSL2 (ENSMFAG00000033144) #28 ENSMFAG00000031405 ##31 ENSMFAG00000000394 #31 ENSMFAG00000044396 ##31 CXCR3 (ENSMFAG00000031295) GCNA (ENSMFAG00000046224) OGT (ENSMFAG00000001803) ENSMFAG00000036860 ENSMFAG00000054759 ENSMFAG00000031355 ENSMFAG00000060403 ENSMFAG00000047652 Cercopithecinae_b ANCESTRAL SPECIES 46 ENSGT00390000008296.b.a.a.h ENSGT00910000146883.A ENSGT00390000003601.a ENSGT00940000154744.m.a ENSGT00940000162554 ENSGT00940000160311 ENSGT00410000029400.f ENSGT00940000163063 ENSGT00410000029400.e ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.g.a.a ##31 ENSGT00390000015252.h #31 ENSGT00390000015252.g.a.b ##31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00950000183584 ENSGT00940000154606.`c.b Olive baboon MODERN SPECIES 792 ENSPANG00000030463 ABCB7 (ENSPANG00000026346) UPRT (ENSPANG00000017665) ENSPANG00000001066 ZDHHC15 (ENSPANG00000019929) ENSPANG00000038963 MAGEE2 (ENSPANG00000005315) ENSPANG00000013474 ENSPANG00000041868 CDX4 (ENSPANG00000044820) ENSPANG00000011549 ENSPANG00000035979 ENSPANG00000048671 ENSPANG00000046739 PHKA1 (ENSPANG00000014929) #21 HDAC8 (ENSPANG00000006122) #22 ENSPANG00000038920 #25 ENSPANG00000043866 FGF16 (ENSPANG00000002965) ATRX (ENSPANG00000024984) MAGT1 (ENSPANG00000012904) ENSPANG00000008508 ATP7A (ENSPANG00000019286) ENSPANG00000011695 TAF9B (ENSPANG00000006121) ENSPANG00000051297 ENSPANG00000041600 ENSPANG00000038489 LPAR4 (ENSPANG00000014311) P2RY10 (ENSPANG00000010847) ENSPANG00000043750 Cercopithecinae_d ANCESTRAL SPECIES 207 ENSGT00940000163063 ENSGT00410000029400.f ENSGT00410000029400.e ENSGT00940000160311 ENSGT00550000074828.a.g.b.l ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00950000182963.b.b #28 ENSGT00940000163191 Sooty mangabey MODERN SPECIES 412 ENSCATG00000043214 PHKA1 (ENSCATG00000033409) #21 HDAC8 (ENSCATG00000031035) #22 CITED1 (ENSCATG00000036514) #24 ENSCATG00000029683 #25 ENSCATG00000032170 ERCC6L (ENSCATG00000038031) #27 NHSL2 (ENSCATG00000029367) #28 RTL5 (ENSCATG00000043303) Drill MODERN SPECIES 1261 GOLIM4 (ENSMLEG00000032160) ENSMLEG00000034698 ENSMLEG00000034654 ENSMLEG00000034097 ENSMLEG00000022728 WDR49 (ENSMLEG00000033324) SERPINI2 (ENSMLEG00000029650) ZBBX (ENSMLEG00000012570) ENSMLEG00000030656 ENSMLEG00000027299 ENSMLEG00000030049 PHKA1 (ENSMLEG00000035533) #21 HDAC8 (ENSMLEG00000031268) #22 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 486 ENSGT00940000157843.g #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029.z.e.e.a ##26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.b.b ##26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 Golden snub-nosed monkey MODERN SPECIES 1818 HDAC8 (ENSRROG00000045442) #22 CITED1 (ENSRROG00000023044) #24 ENSRROG00000037958 #25 ERCC6L (ENSRROG00000042561) #27 ENSRROG00000017904 ##26 RTL5 (ENSRROG00000003440) NHSL2 (ENSRROG00000017791) #28 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 694 ENSGT00940000165171 ENSGT00410000029400.f ENSGT00410000029400.e ENSGT00950000183118.A.c.b #21 ENSGT00940000157843.h.a #22 Golden snub-nosed monkey MODERN SPECIES 966 ENSRROG00000030432 #22 Black snub-nosed monkey MODERN SPECIES 274 ENSRBIG00000031391 #21 ENSRBIG00000033697 #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000157843.h.b #22 Black snub-nosed monkey MODERN SPECIES 1503 ENSRBIG00000037379 #22 Tarsier MODERN SPECIES 6703 ENSTSYG00000037163 HDAC8 (ENSTSYG00000009589) #22 CITED1 (ENSTSYG00000002080) #24 RPS4X (ENSTSYG00000003137) #25 ERCC6L (ENSTSYG00000013701) #27 ENSTSYG00000035103 ##26 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311.g.b ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Lemuriformes ANCESTRAL SPECIES 49 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311.g.b ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.z #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Mouse lemur MODERN SPECIES 169 UPRT (ENSMICG00000001079) ENSMICG00000014514 NEXMIF (ENSMICG00000028218) RLIM (ENSMICG00000017508) SLC16A2 (ENSMICG00000043965) CHIC1 (ENSMICG00000026372) ENSMICG00000032913 CDX4 (ENSMICG00000011271) ENSMICG00000047642 ENSMICG00000042715 ENSMICG00000043211 ENSMICG00000047883 PHKA1 (ENSMICG00000007902) #21 ENSMICG00000031459 ENSMICG00000028991 HDAC8 (ENSMICG00000007893) #22 CITED1 (ENSMICG00000016613) #24 ENSMICG00000016606 #25 ERCC6L (ENSMICG00000035415) #27 ENSMICG00000001640 #26 NHSL2 (ENSMICG00000008280) #28 ENSMICG00000038295 CXCR3 (ENSMICG00000038479) OGT (ENSMICG00000003078) ENSMICG00000017461 ENSMICG00000042674 ITGB1BP2 (ENSMICG00000000235) NONO (ENSMICG00000000232) ZMYM3 (ENSMICG00000014095) GJB1 (ENSMICG00000014093) NLGN3 (ENSMICG00000014073) Lemuriformes_a ANCESTRAL SPECIES 95 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Greater bamboo lemur MODERN SPECIES 961 PHKA1 (ENSPSMG00000001521) #21 HDAC8 (ENSPSMG00000002315) #22 ENSPSMG00000002985 ENSPSMG00000002988 #23 Coquerels sifaka MODERN SPECIES 56 PHKA1 (ENSPCOG00000019881) #21 HDAC8 (ENSPCOG00000008094) #22 CITED1 (ENSPCOG00000013588) #24 RPS4X (ENSPCOG00000027468) ##25 ERCC6L (ENSPCOG00000024286) #27 NHSL2 (ENSPCOG00000021201) #28 CXCR3 (ENSPCOG00000022834) OGT (ENSPCOG00000017367) ENSPCOG00000007901 ENSPCOG00000024110 ITGB1BP2 (ENSPCOG00000020946) NONO (ENSPCOG00000008197) ZMYM3 (ENSPCOG00000022189) GJB1 (ENSPCOG00000009326) NLGN3 (ENSPCOG00000015168) MED12 (ENSPCOG00000023218) IL2RG (ENSPCOG00000022304) Bushbaby MODERN SPECIES 410 PHKA1 (ENSOGAG00000016652) #21 ENSOGAG00000030470 HDAC8 (ENSOGAG00000011814) #22 CITED1 (ENSOGAG00000011810) #24 ENSOGAG00000011808 #25 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc ENSGT00940000160693 ENSGT01030000234513.B.a Glires ANCESTRAL SPECIES 10 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Rodentia ANCESTRAL SPECIES 10 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea ANCESTRAL SPECIES 50 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT00390000015252.c.a.b #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.c.a.a #31 ENSGT00390000015252.c.a.b #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000156489.m ENSGT00940000168699 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Golden Hamster MODERN SPECIES 727 Dmrtc1b (ENSMAUG00000010338) ENSMAUG00000008738 #21 Hdac8 (ENSMAUG00000006310) #22 Cited1 (ENSMAUG00000020556) #24 Rps4x (ENSMAUG00000013223) #25 Pin4 (ENSMAUG00000015251) #26 Rtl5 (ENSMAUG00000009321) Nhsl2 (ENSMAUG00000013469) #28 ENSMAUG00000007111 Cxcr3 (ENSMAUG00000006658) ENSMAUG00000015275 ENSMAUG00000010446 Taf1 (ENSMAUG00000018664) Itgb1bp2 (ENSMAUG00000007311) Nono (ENSMAUG00000016243) Zmym3 (ENSMAUG00000015148) Gjb1 (ENSMAUG00000011973) Nlgn3 (ENSMAUG00000004367) Chinese hamster chok1gshd MODERN SPECIES 16 Zcchc13 (ENSCGRG00001009786) ENSCGRG00001004584 Tsx (ENSCGRG00001005790) Chic1 (ENSCGRG00001011931) ENSCGRG00001012274 Cdx4 (ENSCGRG00001020397) ENSCGRG00001012385 ENSCGRG00001007129 ENSCGRG00001015812 Eif2s3y (ENSCGRG00001016219) Nap1l2 (ENSCGRG00001003632) ENSCGRG00001023387 Dmrtc1a (ENSCGRG00001018624) ENSCGRG00001024855 Phka1 (ENSCGRG00001020129) #21 Hdac8 (ENSCGRG00001022455) #22 Cited1 (ENSCGRG00001022122) #24 Rps4x (ENSCGRG00001018159) ##25 Ercc6l (ENSCGRG00001016668) #27 Pin4 (ENSCGRG00001023057) #26 Nhsl2 (ENSCGRG00001018292) #28 Rtl5 (ENSCGRG00001010452) ENSCGRG00001012656 ##29 Cxcr3 (ENSCGRG00001013701) ENSCGRG00001014167 Ogt (ENSCGRG00001011594) 8030474K03Rik (ENSCGRG00001022034) #31 Gm4779 (ENSCGRG00001010077) #31 Cricetidae_B ANCESTRAL SPECIES 54 ENSGT00940000156489.m ENSGT00900000143537 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.c.a.a #31 ENSGT00390000015252.c.a.b #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Prairie vole MODERN SPECIES 360 ENSMOCG00000007642 Atp11c (ENSMOCG00000002605) ENSMOCG00000012975 Gm7073 (ENSMOCG00000018667) Sox3 (ENSMOCG00000009062) ENSMOCG00000013955 Ldoc1 (ENSMOCG00000008324) ENSMOCG00000006967 Magec2 (ENSMOCG00000016294) ENSMOCG00000017215 Slitrk4 (ENSMOCG00000008180) ENSMOCG00000014952 Ctag2 (ENSMOCG00000017014) ENSMOCG00000015005 Phka1 (ENSMOCG00000013482) #21 Hdac8 (ENSMOCG00000019902) #22 Cited1 (ENSMOCG00000013938) #24 ENSMOCG00000014451 #25 Ercc6l (ENSMOCG00000021344) #27 ENSMOCG00000000929 #26 Nhsl2 (ENSMOCG00000002880) #28 Rtl5 (ENSMOCG00000000142) Cxcr3 (ENSMOCG00000007041) Ogt (ENSMOCG00000013563) Taf1 (ENSMOCG00000001297) Itgb1bp2 (ENSMOCG00000021266) ENSMOCG00000005532 Zmym3 (ENSMOCG00000007682) Gjb1 (ENSMOCG00000009230) Nlgn3 (ENSMOCG00000015847) Med12 (ENSMOCG00000013807) Northern American deer mouse MODERN SPECIES 475 Zcchc13 (ENSPEMG00000030313) ENSPEMG00000028568 Tsx (ENSPEMG00000008527) Chic1 (ENSPEMG00000030446) Cdx4 (ENSPEMG00000022957) ENSPEMG00000031031 ENSPEMG00000028389 ENSPEMG00000029441 ENSPEMG00000026745 Dmrtc1a (ENSPEMG00000009870) 1700031F05Rik (ENSPEMG00000019008) Dmrtc1b (ENSPEMG00000013412) ENSPEMG00000016284 ENSPEMG00000014842 Phka1 (ENSPEMG00000007806) #21 Hdac8 (ENSPEMG00000013611) #22 ENSPEMG00000029011 Cited1 (ENSPEMG00000004332) #24 ENSPEMG00000016482 #25 Ercc6l (ENSPEMG00000007920) #27 Pin4 (ENSPEMG00000009326) #26 Nhsl2 (ENSPEMG00000006950) #28 Rtl5 (ENSPEMG00000028195) 8030474K03Rik (ENSPEMG00000028164) #31 Gm4779 (ENSPEMG00000015753) #31 Cxcr3 (ENSPEMG00000018113) Ogt (ENSPEMG00000012399) Taf1 (ENSPEMG00000011524) ENSPEMG00000029064 Itgb1bp2 (ENSPEMG00000004183) Nono (ENSPEMG00000011150) Murinae ANCESTRAL SPECIES 14 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00520000059967 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus ANCESTRAL SPECIES 9 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus_A ANCESTRAL SPECIES 15 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Mus_B ANCESTRAL SPECIES 14 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000168699 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT00390000015252.c.a.b #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Mouse MODERN SPECIES 37 Gm26992 (ENSMUSG00000098078) Tsx (ENSMUSG00000031329) Chic1 (ENSMUSG00000031327) Cdx4 (ENSMUSG00000031326) Nap1l2 (ENSMUSG00000082229) 1700018G05Rik (ENSMUSG00000109745) 1700011M02Rik (ENSMUSG00000079476) Dmrtc1a (ENSMUSG00000031323) 1700031F05Rik (ENSMUSG00000032894) Dmrtc1c2 (ENSMUSG00000067561) Dmrtc1c1 (ENSMUSG00000067562) Dmrtc1b (ENSMUSG00000073027) Gm9112 (ENSMUSG00000079479) Gm3880 (ENSMUSG00000081443) Phka1 (ENSMUSG00000034055) #21 Hdac8 (ENSMUSG00000067567) #22 Cited1 (ENSMUSG00000051159) #24 Rps4x (ENSMUSG00000031320) #25 Ercc6l (ENSMUSG00000051220) #27 Pin4 (ENSMUSG00000079480) #26 Rtl5 (ENSMUSG00000049191) Nhsl2 (ENSMUSG00000079481) #28 Gm3858 (ENSMUSG00000118638) #31 8030474K03Rik (ENSMUSG00000046774) #31 Gm4779 (ENSMUSG00000045010) #31 Cxcr3 (ENSMUSG00000050232) Ogt (ENSMUSG00000034160) Taf1 (ENSMUSG00000031314) Itgb1bp2 (ENSMUSG00000031312) Nono (ENSMUSG00000031311) Zmym3 (ENSMUSG00000031310) Mus_C ANCESTRAL SPECIES 22 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00900000143788 ENSGT00520000061207 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00410000029400 ENSGT00940000156489.m ENSGT00520000059967 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.d #31 ENSGT00390000015252.c.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a spretus MODERN SPECIES 19 Abcb7 (MGP_SPRETEiJ_G0034479) Nexmif (MGP_SPRETEiJ_G0034478) Rlim (MGP_SPRETEiJ_G0034477) Slc16a2 (MGP_SPRETEiJ_G0034476) Zcchc13 (MGP_SPRETEiJ_G0034475) MGP_SPRETEiJ_G0034474 Tsx (MGP_SPRETEiJ_G0034473) Chic1 (MGP_SPRETEiJ_G0034472) Cdx4 (MGP_SPRETEiJ_G0034471) Nap1l2 (MGP_SPRETEiJ_G0034470) MGP_SPRETEiJ_G0034469 Dmrtc1a (MGP_SPRETEiJ_G0034468) MGP_SPRETEiJ_G0034467 MGP_SPRETEiJ_G0034466 Phka1 (MGP_SPRETEiJ_G0034465) #21 Hdac8 (MGP_SPRETEiJ_G0034464) #22 Cited1 (MGP_SPRETEiJ_G0034463) #24 MGP_SPRETEiJ_G0034462 ##25 Ercc6l (MGP_SPRETEiJ_G0034461) #27 Pin4 (MGP_SPRETEiJ_G0034460) #26 Rtl5 (MGP_SPRETEiJ_G0034459) Nhsl2 (MGP_SPRETEiJ_G0034458) #28 8030474K03Rik (MGP_SPRETEiJ_G0034457) #31 Cxcr3 (MGP_SPRETEiJ_G0034456) Ogt (MGP_SPRETEiJ_G0034455) Taf1 (MGP_SPRETEiJ_G0034454) Itgb1bp2 (MGP_SPRETEiJ_G0034453) Zmym3 (MGP_SPRETEiJ_G0034451) Gjb1 (MGP_SPRETEiJ_G0034450) Nlgn3 (MGP_SPRETEiJ_G0034449) Med12 (MGP_SPRETEiJ_G0034448) Steppe mouse MODERN SPECIES 3385 ENSMSIG00000008475 #21 Hdac8 (ENSMSIG00000024883) #22 Ryukyu mouse MODERN SPECIES 19 Uprt (MGP_CAROLIEiJ_G0033316) Abcb7 (MGP_CAROLIEiJ_G0033315) Nexmif (MGP_CAROLIEiJ_G0033314) Slc16a2 (MGP_CAROLIEiJ_G0033312) Zcchc13 (MGP_CAROLIEiJ_G0033311) MGP_CAROLIEiJ_G0033310 Tsx (MGP_CAROLIEiJ_G0033309) Chic1 (MGP_CAROLIEiJ_G0033308) Cdx4 (MGP_CAROLIEiJ_G0033307) Nap1l2 (MGP_CAROLIEiJ_G0033306) MGP_CAROLIEiJ_G0033305 Dmrtc1a (MGP_CAROLIEiJ_G0033304) MGP_CAROLIEiJ_G0033303 MGP_CAROLIEiJ_G0033302 Phka1 (MGP_CAROLIEiJ_G0033301) #21 Hdac8 (MGP_CAROLIEiJ_G0033300) #22 Cited1 (MGP_CAROLIEiJ_G0033299) #24 Rps4x (MGP_CAROLIEiJ_G0033298) #25 Ercc6l (MGP_CAROLIEiJ_G0033297) #27 MGP_CAROLIEiJ_G0033296 #26 Rtl5 (MGP_CAROLIEiJ_G0033295) Nhsl2 (MGP_CAROLIEiJ_G0033294) #28 MGP_CAROLIEiJ_G0033293 #31 Cxcr3 (MGP_CAROLIEiJ_G0033292) Ogt (MGP_CAROLIEiJ_G0033291) Taf1 (MGP_CAROLIEiJ_G0033290) Itgb1bp2 (MGP_CAROLIEiJ_G0033289) MGP_CAROLIEiJ_G0033288 Zmym3 (MGP_CAROLIEiJ_G0033287) Gjb1 (MGP_CAROLIEiJ_G0033286) Nlgn3 (MGP_CAROLIEiJ_G0033285) Shrew mouse MODERN SPECIES 23 Uprt (MGP_PahariEiJ_G0031853) Abcb7 (MGP_PahariEiJ_G0031852) Nexmif (MGP_PahariEiJ_G0031851) Rlim (MGP_PahariEiJ_G0031850) Slc16a2 (MGP_PahariEiJ_G0031849) Zcchc13 (MGP_PahariEiJ_G0031848) Tsx (MGP_PahariEiJ_G0031847) Chic1 (MGP_PahariEiJ_G0031846) Cdx4 (MGP_PahariEiJ_G0031845) Nap1l2 (MGP_PahariEiJ_G0031844) Dmrtc1a (MGP_PahariEiJ_G0031843) MGP_PahariEiJ_G0031842 MGP_PahariEiJ_G0031841 MGP_PahariEiJ_G0031840 Phka1 (MGP_PahariEiJ_G0031839) #21 Hdac8 (MGP_PahariEiJ_G0031838) #22 Cited1 (MGP_PahariEiJ_G0031837) #24 Rps4x (MGP_PahariEiJ_G0031836) #25 Ercc6l (MGP_PahariEiJ_G0031835) #27 Pin4 (MGP_PahariEiJ_G0031834) #26 Rtl5 (MGP_PahariEiJ_G0031833) Nhsl2 (MGP_PahariEiJ_G0031832) #28 MGP_PahariEiJ_G0031831 #31 Cxcr3 (MGP_PahariEiJ_G0031830) Ogt (MGP_PahariEiJ_G0031829) MGP_PahariEiJ_G0031828 Itgb1bp2 (MGP_PahariEiJ_G0031827) Nono (MGP_PahariEiJ_G0031826) Zmym3 (MGP_PahariEiJ_G0031825) Gjb1 (MGP_PahariEiJ_G0031824) Nlgn3 (MGP_PahariEiJ_G0031823) Rat MODERN SPECIES 46 Cdx4 (ENSRNOG00000002974) LOC100361671 (ENSRNOG00000003008) RGD1562521 (ENSRNOG00000003009) AABR07039336.2 (ENSRNOG00000003025) AABR07039334.1 (ENSRNOG00000022267) ENSRNOG00000064026 Fam236d (ENSRNOG00000069062) Dmrtc1b (ENSRNOG00000022286) Dmrtc1c1 (ENSRNOG00000068646) LOC120099304 (ENSRNOG00000069736) ENSRNOG00000068588 ENSRNOG00000065493 AABR07039229.2 (ENSRNOG00000048295) LOC679960 (ENSRNOG00000003062) Phka1 (ENSRNOG00000003063) #21 Hdac8 (ENSRNOG00000003122) #22 Cited1 (ENSRNOG00000003189) #24 Rps4x (ENSRNOG00000003201) ##25 Ercc6l (ENSRNOG00000003208) #27 Pin4 (ENSRNOG00000050051) #26 Rtl5 (ENSRNOG00000045779) Nhsl2 (ENSRNOG00000037951) #28 LOC102555994 (ENSRNOG00000060462) #31 Cxhxorf49 (ENSRNOG00000025211) #31 LOC102553785 (ENSRNOG00000025200) #31 Cxcr3 (ENSRNOG00000003305) LOC102548506 (ENSRNOG00000066689) Ogt (ENSRNOG00000003359) Taf1 (ENSRNOG00000002565) Itgb1bp2 (ENSRNOG00000003596) Nono (ENSRNOG00000003689) Upper Galilee mountains blind mole rat MODERN SPECIES 1742 Dmrtc1b (ENSNGAG00000017712) Phka1 (ENSNGAG00000018710) #21 Hdac8 (ENSNGAG00000000558) #22 Cited1 (ENSNGAG00000010654) #24 Rps4x (ENSNGAG00000011593) #25 Ercc6l (ENSNGAG00000021063) #27 ENSNGAG00000000797 #26 Nhsl2 (ENSNGAG00000006702) #28 Rtl5 (ENSNGAG00000014752) Cxcr3 (ENSNGAG00000012996) Ogt (ENSNGAG00000017957) ENSNGAG00000013716 Taf1 (ENSNGAG00000019411) Itgb1bp2 (ENSNGAG00000011479) Nono (ENSNGAG00000010857) Zmym3 (ENSNGAG00000016287) Gjb1 (ENSNGAG00000008737) Nlgn3 (ENSNGAG00000011722) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 80 ENSJJAG00000013578 Chic1 (ENSJJAG00000022346) ENSJJAG00000015455 ENSJJAG00000007003 Nap1l2 (ENSJJAG00000005294) ENSJJAG00000009723 ENSJJAG00000007037 ENSJJAG00000017642 ENSJJAG00000020172 Phka1 (ENSJJAG00000016074) #21 ENSJJAG00000013599 #22 Cited1 (ENSJJAG00000021265) #24 Rps4x (ENSJJAG00000018258) #25 Ercc6l (ENSJJAG00000022875) #27 Pin4 (ENSJJAG00000022110) #26 ENSJJAG00000023103 ENSJJAG00000008830 Cxcr3 (ENSJJAG00000024149) ENSJJAG00000020751 ENSJJAG00000013564 ENSJJAG00000016438 Taf1 (ENSJJAG00000016231) Itgb1bp2 (ENSJJAG00000022114) ENSJJAG00000017151 Zmym3 (ENSJJAG00000017423) Gjb1 (ENSJJAG00000015275) Lesser Egyptian jerboa MODERN SPECIES 71 Zfhx3 (ENSJJAG00000004370) ENSJJAG00000016503 Pmfbp1 (ENSJJAG00000021758) Dhx38 (ENSJJAG00000015149) Txnl4b (ENSJJAG00000014020) Hp (ENSJJAG00000000389) Dhodh (ENSJJAG00000004380) Pkd1l3 (ENSJJAG00000019074) Ist1 (ENSJJAG00000009199) Zfp821 (ENSJJAG00000017771) ENSJJAG00000004633 ENSJJAG00000006838 Ap1g1 (ENSJJAG00000022831) Phlpp2 (ENSJJAG00000018183) Marveld3 (ENSJJAG00000015672) ENSJJAG00000016248 #22 Tat (ENSJJAG00000015605) Chst4 (ENSJJAG00000016154) Zfp612 (ENSJJAG00000014956) Tle7 (ENSJJAG00000020440) Calb2 (ENSJJAG00000019534) ENSJJAG00000013980 ENSJJAG00000010966 Hydin (ENSJJAG00000024000) ENSJJAG00000018488 Vac14 (ENSJJAG00000000270) Mtss2 (ENSJJAG00000015697) Il34 (ENSJJAG00000013016) Sf3b3 (ENSJJAG00000003948) Cog4 (ENSJJAG00000013653) Fcsk (ENSJJAG00000022615) Kangaroo rat MODERN SPECIES 545 ENSDORG00000014278 Phka1 (ENSDORG00000013605) #21 Hdac8 (ENSDORG00000013603) #22 ENSDORG00000028620 Cited1 (ENSDORG00000025773) #24 Rps4x (ENSDORG00000008571) #25 Ercc6l (ENSDORG00000007865) #27 ENSDORG00000024313 #26 Nhsl2 (ENSDORG00000013046) #28 Rtl5 (ENSDORG00000024359) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Sciuridae ANCESTRAL SPECIES 35 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.b #31 ENSGT00390000015252.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 Marmotini ANCESTRAL SPECIES 66 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.a.b #31 ENSGT00390000015252.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00390000018613.b.t.a ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 Marmotini_b ANCESTRAL SPECIES 251 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 Squirrel MODERN SPECIES 362 ENSSTOG00000020182 PHKA1 (ENSSTOG00000008458) #21 HDAC8 (ENSSTOG00000008440) #22 CITED1 (ENSSTOG00000008435) #24 ENSSTOG00000028692 ##25 ENSSTOG00000025956 DGAT2L6 (ENSSTOG00000024800) AWAT1 (ENSSTOG00000011451) P2RY4 (ENSSTOG00000015697) Arr3 (ENSSTOG00000011462) PDZD11 (ENSSTOG00000027107) KIF4A (ENSSTOG00000009604) GDPD2 (ENSSTOG00000004472) DLG3 (ENSSTOG00000009640) TEX11 (ENSSTOG00000009656) SLC7A3 (ENSSTOG00000014255) SNX12 (ENSSTOG00000028586) FOXO4 (ENSSTOG00000014587) Arctic ground squirrel MODERN SPECIES 605 ENSUPAG00010015251 PHKA1 (ENSUPAG00010015278) #21 HDAC8 (ENSUPAG00010016655) #22 CITED1 (ENSUPAG00010016670) #24 ENSUPAG00010016687 #25 ERCC6L (ENSUPAG00010016692) #27 PIN4 (ENSUPAG00010016701) #26 NHSL2 (ENSUPAG00010016706) #28 RTL5 (ENSUPAG00010016731) Alpin marmot MODERN SPECIES 74 ENSMMMG00000021453 ENSMMMG00000021472 PHKA1 (ENSMMMG00000021479) #21 HDAC8 (ENSMMMG00000021613) #22 CITED1 (ENSMMMG00000021638) #24 ENSMMMG00000021648 #25 ERCC6L (ENSMMMG00000021653) #27 PIN4 (ENSMMMG00000021657) #26 NHSL2 (ENSMMMG00000021658) #28 RTL5 (ENSMMMG00000021665) ENSMMMG00000021670 #31 ENSMMMG00000021674 #31 ENSMMMG00000021680 #31 CXCR3 (ENSMMMG00000021685) ENSMMMG00000021687 ENSMMMG00000021699 ENSMMMG00000021704 ENSMMMG00000021716 ENSMMMG00000021790 Eurasian red squirrel MODERN SPECIES 156 ABCB7 (ENSSVLG00005014285) NEXMIF (ENSSVLG00005015017) RLIM (ENSSVLG00005015096) SLC16A2 (ENSSVLG00005015129) ZCCHC13 (ENSSVLG00005015163) ENSSVLG00005015182 CDX4 (ENSSVLG00005015316) NAP1L2 (ENSSVLG00005015352) ENSSVLG00005015384 ENSSVLG00005015416 ENSSVLG00005015435 ENSSVLG00005015457 ENSSVLG00005015556 ENSSVLG00005015655 PHKA1 (ENSSVLG00005015757) #21 HDAC8 (ENSSVLG00005016008) #22 CITED1 (ENSSVLG00005016381) #24 ENSSVLG00005016444 #25 PIN4 (ENSSVLG00005016533) #26 ERCC6L (ENSSVLG00005016734) #27 NHSL2 (ENSSVLG00005016754) #28 RTL5 (ENSSVLG00005016947) ENSSVLG00005016970 #31 ENSSVLG00005017206 #31 ENSSVLG00005017271 #31 ENSSVLG00005017338 #31 ENSSVLG00005017662 #31 ENSSVLG00005017896 #31 SERP1 (ENSSVLG00005017996) ENSSVLG00005018019 #31 CXCR3 (ENSSVLG00005018095) Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.a.a ##25 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837.`b #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00390000012178.g.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 ENSGT00390000016333 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000003601.a ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837.`b #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Hystricomorpha_b ANCESTRAL SPECIES 74 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00990000205127 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837.`b #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442.sc.b ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 ENSGT00440000037505.b Long-tailed chinchilla MODERN SPECIES 182 PHKA1 (ENSCLAG00000013584) #21 HDAC8 (ENSCLAG00000015755) #22 ENSCLAG00000015363 ENSCLAG00000015266 #25 ENSCLAG00000015218 #27 PIN4 (ENSCLAG00000014880) #26 RTL5 (ENSCLAG00000014510) NHSL2 (ENSCLAG00000011242) #28 CXCR3 (ENSCLAG00000010111) ENSCLAG00000009475 OGT (ENSCLAG00000006474) ENSCLAG00000004940 ITGB1BP2 (ENSCLAG00000003431) NONO (ENSCLAG00000003642) ZMYM3 (ENSCLAG00000003585) GJB1 (ENSCLAG00000004895) NLGN3 (ENSCLAG00000006482) Degu MODERN SPECIES 321 PHKA1 (ENSODEG00000002058) #21 ENSODEG00000002103 HDAC8 (ENSODEG00000002146) #22 ENSODEG00000002191 ENSODEG00000002215 ENSODEG00000002252 RPS4X (ENSODEG00000002268) ##25 ERCC6L (ENSODEG00000002328) #27 ENSODEG00000002336 #26 NHSL2 (ENSODEG00000002360) #28 RTL5 (ENSODEG00000002380) CXCR3 (ENSODEG00000002401) OGT (ENSODEG00000002656) ENSODEG00000002771 ITGB1BP2 (ENSODEG00000002957) ENSODEG00000002994 ENSODEG00000018894 ZMYM3 (ENSODEG00000003059) Guinea pig MODERN SPECIES 26 ENSCPOG00000036844 MAGT1 (ENSCPOG00000027554) ATRX (ENSCPOG00000007873) FGF16 (ENSCPOG00000007870) MAGEE1 (ENSCPOG00000039465) PBDC1 (ENSCPOG00000006794) ZDHHC15 (ENSCPOG00000006742) UPRT (ENSCPOG00000035232) ABCB7 (ENSCPOG00000010708) NEXMIF (ENSCPOG00000014831) RLIM (ENSCPOG00000031438) SLC16A2 (ENSCPOG00000000465) CHIC1 (ENSCPOG00000035632) ENSCPOG00000009525 PHKA1 (ENSCPOG00000005675) #21 HDAC8 (ENSCPOG00000005671) #22 ENSCPOG00000003816 ENSCPOG00000006337 #25 ERCC6L (ENSCPOG00000011407) #27 PIN4 (ENSCPOG00000031758) #26 NHSL2 (ENSCPOG00000005172) #28 RTL5 (ENSCPOG00000021990) CXCR3 (ENSCPOG00000008446) OGT (ENSCPOG00000014682) ENSCPOG00000035003 ENSCPOG00000039595 ITGB1BP2 (ENSCPOG00000038156) ENSCPOG00000010263 ZMYM3 (ENSCPOG00000010256) NLGN3 (ENSCPOG00000006193) MED12 (ENSCPOG00000000903) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032788 ENSHGLG00000002294 ENSHGLG00000002255 ATP7A (ENSHGLG00000001804) ENSHGLG00000033714 ENSHGLG00000002230 ENSHGLG00000039396 PGK1 (ENSHGLG00000033746) ENSHGLG00000037603 ENSHGLG00000005962 ENSHGLG00000045054 CYSLTR1 (ENSHGLG00000036741) ENSHGLG00000018958 ENSHGLG00000009342 #21 ENSHGLG00000045192 HDAC8 (ENSHGLG00000015554) #22 CITED1 (ENSHGLG00000013001) #24 ENSHGLG00000009172 ##25 ERCC6L (ENSHGLG00000016594) #27 PIN4 (ENSHGLG00000043461) #26 ENSHGLG00000033358 NHSL2 (ENSHGLG00000004791) #28 RTL5 (ENSHGLG00000043760) ENSHGLG00000047657 ENSHGLG00000050364 ENSHGLG00000037492 #31 ENSHGLG00000006799 ENSHGLG00000034062 ENSHGLG00000008499 ENSHGLG00000050614 ENSHGLG00000042327 Lagomorpha ANCESTRAL SPECIES 40 ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764.a ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.e.a #31 ENSGT00390000015252.f #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.sc.a.b ENSGT00940000160693 Pika MODERN SPECIES 2015 HDAC8 (ENSOPRG00000002816) #22 Rabbit MODERN SPECIES 1401 ENSOCUG00000029369 FAM199X (ENSOCUG00000014228) SLC25A53 (ENSOCUG00000003541) ENSOCUG00000014764 ENSOCUG00000021083 ENSOCUG00000024276 CHIC1 (ENSOCUG00000009801) CDX4 (ENSOCUG00000013356) ENSOCUG00000027857 NAP1L2 (ENSOCUG00000007414) ENSOCUG00000002565 ENSOCUG00000025806 ENSOCUG00000029608 ENSOCUG00000024072 PHKA1 (ENSOCUG00000024271) #21 HDAC8 (ENSOCUG00000013317) #22 ENSOCUG00000013315 #24 ENSOCUG00000015749 ##25 ERCC6L (ENSOCUG00000008724) #27 PIN4 (ENSOCUG00000008715) #26 RTL5 (ENSOCUG00000008707) NHSL2 (ENSOCUG00000014345) #28 ENSOCUG00000022701 #31 ENSOCUG00000021556 #31 ENSOCUG00000029373 #31 ENSOCUG00000029215 #31 ENSOCUG00000036122 #31 ENSOCUG00000003502 ENSOCUG00000028210 #31 ENSOCUG00000030259 #31 CXCR3 (ENSOCUG00000015578) Tree shrew MODERN SPECIES 5123 PHKA1 (ENSTBEG00000015214) #21 HDAC8 (ENSTBEG00000014893) #22 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157843 #22 Common shrew MODERN SPECIES 3321 HDAC8 (ENSSARG00000008871) #22 Hedgehog MODERN SPECIES 4358 HDAC8 (ENSEEUG00000014963) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Caniformia ANCESTRAL SPECIES 22 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ursidae ANCESTRAL SPECIES 47 ENSGT00390000016333 ENSGT00940000163487 ENSGT01030000239825 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ursus ANCESTRAL SPECIES 257 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 Polar bear MODERN SPECIES 345 PHKA1 (ENSUMAG00000004085) #21 HDAC8 (ENSUMAG00000004851) #22 CITED1 (ENSUMAG00000004857) #24 ENSUMAG00000004859 #25 ERCC6L (ENSUMAG00000004863) #27 PIN4 (ENSUMAG00000004865) #26 ENSUMAG00000004886 American black bear MODERN SPECIES 1321 ENSUAMG00000027978 ENSUAMG00000027976 #21 ENSUAMG00000027943 #21 HDAC8 (ENSUAMG00000027942) #22 Giant Panda MODERN SPECIES 2288 ENSAMEG00000026155 ZDHHC15 (ENSAMEG00000017414) ENSAMEG00000023973 UPRT (ENSAMEG00000001806) ABCB7 (ENSAMEG00000001785) NEXMIF (ENSAMEG00000002822) RLIM (ENSAMEG00000002826) SLC16A2 (ENSAMEG00000002832) ENSAMEG00000010405 ZCCHC13 (ENSAMEG00000031042) CHIC1 (ENSAMEG00000016309) CDX4 (ENSAMEG00000002483) NAP1L2 (ENSAMEG00000026435) ENSAMEG00000026180 PHKA1 (ENSAMEG00000005856) #21 HDAC8 (ENSAMEG00000005840) #22 ENSAMEG00000027356 #24 RPS4X (ENSAMEG00000005805) #25 ERCC6L (ENSAMEG00000005804) #27 ENSAMEG00000005801 ENSAMEG00000018760 NHSL2 (ENSAMEG00000018764) #28 ENSAMEG00000025938 #31 CXCR3 (ENSAMEG00000019767) ENSAMEG00000016181 OGT (ENSAMEG00000016129) ENSAMEG00000016102 ENSAMEG00000019575 ITGB1BP2 (ENSAMEG00000016081) NONO (ENSAMEG00000016057) ZMYM3 (ENSAMEG00000016021) Mustelinae ANCESTRAL SPECIES 110 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Ferret MODERN SPECIES 402 ENSMPUG00000005379 PHKA1 (ENSMPUG00000005353) #21 HDAC8 (ENSMPUG00000005345) #22 CITED1 (ENSMPUG00000005336) #24 ENSMPUG00000005294 ##25 ERCC6L (ENSMPUG00000005291) #27 PIN4 (ENSMPUG00000005287) #26 NHSL2 (ENSMPUG00000005280) #28 RTL5 (ENSMPUG00000018491) ENSMPUG00000005276 ENSMPUG00000005269 #31 CXCR3 (ENSMPUG00000005263) ENSMPUG00000005256 OGT (ENSMPUG00000005097) ENSMPUG00000005076 ENSMPUG00000005070 ITGB1BP2 (ENSMPUG00000004948) NONO (ENSMPUG00000004937) American mink MODERN SPECIES 463 ENSNVIG00000024463 PHKA1 (ENSNVIG00000024450) #21 HDAC8 (ENSNVIG00000024413) #22 CITED1 (ENSNVIG00000024410) #24 ENSNVIG00000024409 ##25 ERCC6L (ENSNVIG00000024408) #27 ENSNVIG00000024405 #26 RGAG4 (ENSNVIG00000024404) NHSL2 (ENSNVIG00000024397) #28 Canidae ANCESTRAL SPECIES 59 ENSGT00390000016333.r ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.`b ENSGT00940000160693 Canis_lupus ANCESTRAL SPECIES 44 ENSGT00390000016333.r.a ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.eb.a #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442.`b ENSGT00940000160693 Dog MODERN SPECIES 144 ABCB7 (ENSCAFG00845030100) ENSCAFG00845030063 NEXMIF (ENSCAFG00845030052) RLIM (ENSCAFG00845030030) SLC16A2 (ENSCAFG00845029973) ENSCAFG00845029963 ZCCHC13 (ENSCAFG00845029957) ENSCAFG00845029889 CHIC1 (ENSCAFG00845029847) CDX4 (ENSCAFG00845029824) ENSCAFG00845029796 ENSCAFG00845029787 ENSCAFG00845029763 ENSCAFG00845029726 ENSCAFG00845023674 #21 HDAC8 (ENSCAFG00845020238) #22 CITED1 (ENSCAFG00845020063) #24 RPS4X (ENSCAFG00845020005) #25 ERCC6L (ENSCAFG00845019976) #27 PIN4 (ENSCAFG00845019941) #26 RTL5 (ENSCAFG00845019888) ENSCAFG00845019851 NHSL2 (ENSCAFG00845019495) #28 ENSCAFG00845019289 #31 ENSCAFG00845019192 #31 CXCR3 (ENSCAFG00845019157) ENSCAFG00845019086 OGT (ENSCAFG00845018937) TAF1 (ENSCAFG00845018115) ENSCAFG00845017943 ITGB1BP2 (ENSCAFG00845017817) Dingo MODERN SPECIES 265 UPRT (ENSCAFG00020024656) ABCB7 (ENSCAFG00020024573) NEXMIF (ENSCAFG00020024551) RLIM (ENSCAFG00020024549) SLC16A2 (ENSCAFG00020024545) ENSCAFG00020024541 ZCCHC13 (ENSCAFG00020024539) ENSCAFG00020024526 CHIC1 (ENSCAFG00020024519) ENSCAFG00020024517 NAP1L2 (ENSCAFG00020024516) ENSCAFG00020024512 ENSCAFG00020024506 ENSCAFG00020024502 PHKA1 (ENSCAFG00020021553) #21 HDAC8 (ENSCAFG00020021326) #22 CITED1 (ENSCAFG00020021325) #24 ENSCAFG00020021317 ##25 ERCC6L (ENSCAFG00020021313) #27 ENSCAFG00020021311 #26 NHSL2 (ENSCAFG00020021306) #28 ENSCAFG00020021301 #31 CXCR3 (ENSCAFG00020021299) OGT (ENSCAFG00020021017) ENSCAFG00020020386 ENSCAFG00020020337 ITGB1BP2 (ENSCAFG00020020322) NONO (ENSCAFG00020020298) ENSCAFG00020020289 ENSCAFG00020020279 GJB1 (ENSCAFG00020020275) Red fox MODERN SPECIES 175 PHKA1 (ENSVVUG00000025468) #21 HDAC8 (ENSVVUG00000025508) #22 CITED1 (ENSVVUG00000025509) #24 RPS4X (ENSVVUG00000025510) ##25 ERCC6L (ENSVVUG00000025512) #27 NHSL2 (ENSVVUG00000025513) #28 RTL5 (ENSVVUG00000025514) ENSVVUG00000000109 #31 CXCR3 (ENSVVUG00000000156) ENSVVUG00000000213 OGT (ENSVVUG00000000263) TAF1 (ENSVVUG00000000579) ENSVVUG00000003285 ITGB1BP2 (ENSVVUG00000003333) NONO (ENSVVUG00000003390) ZMYM3 (ENSVVUG00000003481) GJB1 (ENSVVUG00000005399) Felidae ANCESTRAL SPECIES 12 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00940000166485.a ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Panthera ANCESTRAL SPECIES 47 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.ib #26 ENSGT00950000182963.b.b #28 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Panthera_a ANCESTRAL SPECIES 56 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029.ib #26 ENSGT00950000182963.b.b #28 ENSGT00390000010779.a.b.b.e.b ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 lion MODERN SPECIES 88 PRAF2 (ENSPLOG00000017750) GPKOW (ENSPLOG00000017787) GPR173 (ENSPLOG00000017827) TSPYL2 (ENSPLOG00000017848) KANTR (ENSPLOG00000017918) ENSPLOG00000017925 KDM5C (ENSPLOG00000018055) IQSEC2 (ENSPLOG00000018505) ENSPLOG00000018937 SMC1A (ENSPLOG00000018969) RIBC1 (ENSPLOG00000019163) ENSPLOG00000019275 HUWE1 (ENSPLOG00000019431) ENSPLOG00000020226 ##29 ENSPLOG00000020264 #21 HDAC8 (ENSPLOG00000020404) #22 CITED1 (ENSPLOG00000020526) #24 ENSPLOG00000020555 #25 ENSPLOG00000020673 #26 ERCC6L (ENSPLOG00000020765) #27 NHSL2 (ENSPLOG00000020815) #28 RTL5 (ENSPLOG00000020907) ENSPLOG00000020915 ENSPLOG00000020959 #31 CXCR3 (ENSPLOG00000021020) ENSPLOG00000021053 ENSPLOG00000021106 ENSPLOG00000021138 ENSPLOG00000021269 ENSPLOG00000021598 ITGB1BP2 (ENSPLOG00000021634) leopard MODERN SPECIES 252 PHKA1 (ENSPPRG00000011456) #21 HDAC8 (ENSPPRG00000011115) #22 CITED1 (ENSPPRG00000010889) #24 ENSPPRG00000010809 #25 Tiger MODERN SPECIES 337 ENSPTIG00000019640 PHKA1 (ENSPTIG00000020625) #21 HDAC8 (ENSPTIG00000018831) #22 ENSPTIG00000017192 #24 RPS4X (ENSPTIG00000016567) ##25 SYT10 (ENSPTIG00000015718) ENSPTIG00000006779 ENSPTIG00000012362 CPNE8 (ENSPTIG00000009449) KIF21A (ENSPTIG00000013639) ABCD2 (ENSPTIG00000012386) C12orf40 (ENSPTIG00000011119) SLC2A13 (ENSPTIG00000008372) LRRK2 (ENSPTIG00000020651) CNTN1 (ENSPTIG00000007852) PDZRN4 (ENSPTIG00000004191) GXYLT1 (ENSPTIG00000019972) ENSPTIG00000019364 Cat MODERN SPECIES 252 ENSFCAG00000025696 ABCB7 (ENSFCAG00000009557) RLIM (ENSFCAG00000003136) SLC16A2 (ENSFCAG00000008075) ZCCHC13 (ENSFCAG00000034344) ENSFCAG00000034997 ENSFCAG00000040388 ENSFCAG00000022629 CHIC1 (ENSFCAG00000025058) ENSFCAG00000039701 ENSFCAG00000043804 ENSFCAG00000036265 ENSFCAG00000045208 ENSFCAG00000050490 PHKA1 (ENSFCAG00000007121) #21 HDAC8 (ENSFCAG00000005065) #22 CITED1 (ENSFCAG00000023693) #24 ERCC6L (ENSFCAG00000012038) #27 PIN4 (ENSFCAG00000012036) #26 RTL5 (ENSFCAG00000024876) ENSFCAG00000037362 NHSL2 (ENSFCAG00000009225) #28 CXCR3 (ENSFCAG00000002186) ENSFCAG00000051813 OGT (ENSFCAG00000002182) ENSFCAG00000014809 ENSFCAG00000021936 ITGB1BP2 (ENSFCAG00000014807) NONO (ENSFCAG00000043511) ZMYM3 (ENSFCAG00000014806) NLGN3 (ENSFCAG00000014804) Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Chiroptera ANCESTRAL SPECIES 62 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Megabat MODERN SPECIES 371 HDAC8 (ENSPVAG00000008286) #22 CITED1 (ENSPVAG00000008285) #24 Microchiroptera ANCESTRAL SPECIES 54 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00920000150764 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Greater horseshoe bat MODERN SPECIES ABCB7 (ENSRFEG00010000009) NEXMIF (ENSRFEG00010000012) RLIM (ENSRFEG00010000013) SLC16A2 (ENSRFEG00010000014) ENSRFEG00010000015 ENSRFEG00010000018 CHIC1 (ENSRFEG00010000019) CDX4 (ENSRFEG00010000020) ENSRFEG00010000021 ENSRFEG00010000022 NAP1L2 (ENSRFEG00010000023) ENSRFEG00010000024 ENSRFEG00010000025 ENSRFEG00010000026 PHKA1 (ENSRFEG00010000027) #21 HDAC8 (ENSRFEG00010000028) #22 ENSRFEG00010000029 #24 ENSRFEG00010000030 #25 PIN4 (ENSRFEG00010000031) #26 ERCC6L (ENSRFEG00010000032) #27 NHSL2 (ENSRFEG00010000033) #28 RTL5 (ENSRFEG00010000034) ENSRFEG00010000035 #31 ENSRFEG00010000036 #31 CXCR3 (ENSRFEG00010000037) ENSRFEG00010000039 ENSRFEG00010000041 ENSRFEG00010000042 ENSRFEG00010000043 ITGB1BP2 (ENSRFEG00010000045) ENSRFEG00010000046 Microbat DUPLICATION Microbat MODERN SPECIES 1115 SLC4A11 (ENSMLUG00000000362) ITPA (ENSMLUG00000000358) DDRGK1 (ENSMLUG00000000352) LZTS3 (ENSMLUG00000000347) FASTKD5 (ENSMLUG00000000343) UBOX5 (ENSMLUG00000025497) PTPRA (ENSMLUG00000029093) VPS16 (ENSMLUG00000016651) PCED1A (ENSMLUG00000028662) TMEM239 (ENSMLUG00000002712) CPXM1 (ENSMLUG00000002715) EBF4 (ENSMLUG00000023832) IDH3B (ENSMLUG00000008193) NOP56 (ENSMLUG00000027085) TMC2 (ENSMLUG00000023589) ENSMLUG00000027258 #22 SNRPB (ENSMLUG00000016951) TGM6 (ENSMLUG00000016945) ENSMLUG00000030507 Microbat MODERN SPECIES 941 ZC4H2 (ENSMLUG00000008305) ENSMLUG00000027582 ZC3H12B (ENSMLUG00000013635) LAS1L (ENSMLUG00000013640) ENSMLUG00000030463 ENSMLUG00000005009 MSN (ENSMLUG00000008116) VSIG4 (ENSMLUG00000003881) HEPH (ENSMLUG00000000638) ENSMLUG00000030523 ZCCHC13 (ENSMLUG00000002814) CHIC1 (ENSMLUG00000025620) ENSMLUG00000027332 NAP1L2 (ENSMLUG00000001703) PHKA1 (ENSMLUG00000005413) #21 ENSMLUG00000005406 #22 CITED1 (ENSMLUG00000005401) #24 ENSMLUG00000006172 RPS4X (ENSMLUG00000011685) ##25 ERCC6L (ENSMLUG00000011670) #27 PIN4 (ENSMLUG00000012073) #26 NHSL2 (ENSMLUG00000012253) #28 RTL5 (ENSMLUG00000012246) ENSMLUG00000027587 #31 CXCR3 (ENSMLUG00000008266) OGT (ENSMLUG00000008213) ENSMLUG00000023133 ENSMLUG00000009092 ITGB1BP2 (ENSMLUG00000022665) NONO (ENSMLUG00000002489) ENSMLUG00000026033 Equus ANCESTRAL SPECIES 27 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252.y.b #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Donkey MODERN SPECIES 36 ABCB7 (ENSEASG00005004704) NEXMIF (ENSEASG00005012051) RLIM (ENSEASG00005020336) SLC16A2 (ENSEASG00005025806) ZCCHC13 (ENSEASG00005025614) ENSEASG00005026432 ENSEASG00005034688 CHIC1 (ENSEASG00005034271) ENSEASG00005010490 NAP1L2 (ENSEASG00005032059) ENSEASG00005034662 ENSEASG00005010399 ENSEASG00005030915 ENSEASG00005030313 PHKA1 (ENSEASG00005022796) #21 HDAC8 (ENSEASG00005023051) #22 CITED1 (ENSEASG00005010784) #24 ENSEASG00005032986 #25 ERCC6L (ENSEASG00005007025) #27 PIN4 (ENSEASG00005007027) #26 RTL5 (ENSEASG00005028557) NHSL2 (ENSEASG00005031208) #28 ENSEASG00005035382 ENSEASG00005037481 #31 ENSEASG00005020354 ENSEASG00005035444 OGT (ENSEASG00005020382) ENSEASG00005007044 ENSEASG00005022163 ENSEASG00005025769 ITGB1BP2 (ENSEASG00005036980) Horse MODERN SPECIES 480 UPRT (ENSECAG00000015489) ABCB7 (ENSECAG00000000643) NEXMIF (ENSECAG00000023442) RLIM (ENSECAG00000020600) SLC16A2 (ENSECAG00000019968) CHIC1 (ENSECAG00000016317) ENSECAG00000046425 CDX4 (ENSECAG00000037034) ENSECAG00000044847 NAP1L2 (ENSECAG00000009018) ENSECAG00000002620 ENSECAG00000006837 ENSECAG00000035808 ENSECAG00000033249 PHKA1 (ENSECAG00000023809) #21 HDAC8 (ENSECAG00000018525) #22 CITED1 (ENSECAG00000056091) #24 RPS4X (ENSECAG00000010852) ##25 ERCC6L (ENSECAG00000002513) #27 PIN4 (ENSECAG00000000364) #26 RTL5 (ENSECAG00000023894) NHSL2 (ENSECAG00000002472) #28 ENSECAG00000032482 #31 ENSECAG00000039787 #31 ENSECAG00000040049 ENSECAG00000055137 CXCR3 (ENSECAG00000023587) ENSECAG00000023391 OGT (ENSECAG00000023721) ENSECAG00000058792 ENSECAG00000006365 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Suina ANCESTRAL SPECIES 7 ENSGT00940000160087 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311.rb.b ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Chacoan peccary MODERN SPECIES 22 ZDHHC15 (ENSCWAG00000002160) UPRT (ENSCWAG00000002203) ABCB7 (ENSCWAG00000002270) NEXMIF (ENSCWAG00000002739) RLIM (ENSCWAG00000002752) SLC16A2 (ENSCWAG00000002764) ZCCHC13 (ENSCWAG00000002770) CHIC1 (ENSCWAG00000002797) CDX4 (ENSCWAG00000002816) NAP1L2 (ENSCWAG00000002830) ENSCWAG00000002841 ENSCWAG00000002857 ENSCWAG00000002863 ENSCWAG00000002873 PHKA1 (ENSCWAG00000002918) #21 HDAC8 (ENSCWAG00000003037) #22 CITED1 (ENSCWAG00000003068) #24 ENSCWAG00000003080 #25 PIN4 (ENSCWAG00000003103) #26 ERCC6L (ENSCWAG00000003127) #27 NHSL2 (ENSCWAG00000003145) #28 RTL5 (ENSCWAG00000003169) ENSCWAG00000003178 #31 CXCR3 (ENSCWAG00000003190) OGT (ENSCWAG00000003205) ENSCWAG00000003266 ENSCWAG00000003383 ITGB1BP2 (ENSCWAG00000003394) NONO (ENSCWAG00000003409) ZMYM3 (ENSCWAG00000003425) GJB1 (ENSCWAG00000003454) Pig MODERN SPECIES 300 ENSSSCG00000045470 SLC16A2 (ENSSSCG00000029458) ZCCHC13 (ENSSSCG00000035737) CHIC1 (ENSSSCG00000012416) CDX4 (ENSSSCG00000021225) NAP1L2 (ENSSSCG00000012415) ENSSSCG00000031849 ENSSSCG00000032167 ENSSSCG00000053499 ENSSSCG00000060899 ENSSSCG00000040223 ENSSSCG00000031328 ENSSSCG00000055158 ENSSSCG00000063130 PHKA1 (ENSSSCG00000012411) #21 HDAC8 (ENSSSCG00000021200) #22 CITED1 (ENSSSCG00000012409) #24 ENSSSCG00000034717 RPS4X (ENSSSCG00000012405) #25 ENSSSCG00000012406 ERCC6L (ENSSSCG00000021834) #27 PIN4 (ENSSSCG00000023312) #26 RTL5 (ENSSSCG00000020876) NHSL2 (ENSSSCG00000012408) #28 ENSSSCG00000053529 #31 ENSSSCG00000052088 #31 ENSSSCG00000057131 #31 CXCR3 (ENSSSCG00000012402) OGT (ENSSSCG00000012403) ENSSSCG00000027115 ENSSSCG00000012392 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Camelidae ANCESTRAL SPECIES 43 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000173095 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Arabian camel MODERN SPECIES 204 ZDHHC15 (ENSCDRG00005020979) UPRT (ENSCDRG00005020970) ABCB7 (ENSCDRG00005020791) NEXMIF (ENSCDRG00005020765) RLIM (ENSCDRG00005020761) SLC16A2 (ENSCDRG00005020750) ZCCHC13 (ENSCDRG00005020743) ENSCDRG00005020728 CHIC1 (ENSCDRG00005020723) CDX4 (ENSCDRG00005020715) NAP1L2 (ENSCDRG00005020710) ENSCDRG00005020706 ENSCDRG00005020694 ENSCDRG00005020647 PHKA1 (ENSCDRG00005020606) #21 HDAC8 (ENSCDRG00005010238) #22 CITED1 (ENSCDRG00005009756) #24 ENSCDRG00005009701 #25 ERCC6L (ENSCDRG00005009654) #27 PIN4 (ENSCDRG00005009624) #26 RTL5 (ENSCDRG00005009605) NHSL2 (ENSCDRG00005009450) #28 ENSCDRG00005009260 #31 ENSCDRG00005009238 ENSCDRG00005009119 #31 CXCR3 (ENSCDRG00005009075) OGT (ENSCDRG00005017831) ENSCDRG00005017785 ENSCDRG00005017651 ENSCDRG00005017566 ITGB1BP2 (ENSCDRG00005017480) Alpaca MODERN SPECIES 3279 PHKA1 (ENSVPAG00000010956) #21 HDAC8 (ENSVPAG00000010955) #22 CITED1 (ENSVPAG00000010953) #24 RPS4X (ENSVPAG00000010952) ##25 ERCC6L (ENSVPAG00000010950) #27 PIN4 (ENSVPAG00000010947) #26 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Cetacea ANCESTRAL SPECIES 19 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Odontoceti ANCESTRAL SPECIES 19 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Odontoceti_a ANCESTRAL SPECIES 28 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.a.a ##25 ENSGT00390000005569.x.a.b.b.a.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Dolphin MODERN SPECIES 931 PHKA1 (ENSTTRG00000003470) #21 HDAC8 (ENSTTRG00000003469) #22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00390000009110.ab ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.a.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT00390000015252.q #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b.o ENSGT00990000210226.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 Vaquita MODERN SPECIES 34 RLIM (ENSPSNG00000021171) SLC16A2 (ENSPSNG00000021147) ENSPSNG00000021128 ZCCHC13 (ENSPSNG00000021100) CHIC1 (ENSPSNG00000021038) CDX4 (ENSPSNG00000021015) NAP1L2 (ENSPSNG00000020996) ENSPSNG00000020976 ENSPSNG00000020961 ENSPSNG00000020950 ENSPSNG00000020922 ENSPSNG00000020883 ENSPSNG00000020842 PHKA1 (ENSPSNG00000020622) #21 ENSPSNG00000020488 HDAC8 (ENSPSNG00000020257) #22 CITED1 (ENSPSNG00000020135) #24 ENSPSNG00000020120 ENSPSNG00000020028 #25 ERCC6L (ENSPSNG00000019984) #27 PIN4 (ENSPSNG00000019855) #26 RTL5 (ENSPSNG00000019829) NHSL2 (ENSPSNG00000019714) #28 ENSPSNG00000019652 #31 ENSPSNG00000019407 #31 ENSPSNG00000019357 #31 ENSPSNG00000019317 #31 CXCR3 (ENSPSNG00000019284) ENSPSNG00000019258 ENSPSNG00000019210 ENSPSNG00000019173 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00950000182992.a.b.b.b ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00960000186788.c ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00940000154546.xb.b ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.b.a.b.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191 ENSGT00950000182963.b.b #28 ENSGT01050000244848.B.a.b ENSGT00940000155085.b.o ENSGT00990000210226.a ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Beluga whale MODERN SPECIES 108 ENSDLEG00000011989 ENSDLEG00000012015 PHKA1 (ENSDLEG00000012043) #21 HDAC8 (ENSDLEG00000012186) #22 ENSDLEG00000012218 CITED1 (ENSDLEG00000012236) #24 ENSDLEG00000012246 RPS4X (ENSDLEG00000012257) #25 ERCC6L (ENSDLEG00000012271) #27 PIN4 (ENSDLEG00000012278) #26 NHSL2 (ENSDLEG00000012303) #28 RTL5 (ENSDLEG00000012336) ENSDLEG00000012348 Narwhal MODERN SPECIES 309 UPRT (ENSMMNG00015011908) ABCB7 (ENSMMNG00015011807) ENSMMNG00015011764 NEXMIF (ENSMMNG00015011752) RLIM (ENSMMNG00015011741) SLC16A2 (ENSMMNG00015011721) ENSMMNG00015011664 CHIC1 (ENSMMNG00015011634) CDX4 (ENSMMNG00015011607) NAP1L2 (ENSMMNG00015011594) ENSMMNG00015011584 ENSMMNG00015011562 ENSMMNG00015011531 PHKA1 (ENSMMNG00015010994) #21 ENSMMNG00015010743 HDAC8 (ENSMMNG00015010620) #22 CITED1 (ENSMMNG00015010507) #24 ENSMMNG00015010498 RPS4X (ENSMMNG00015010476) ##25 ERCC6L (ENSMMNG00015010438) #27 PIN4 (ENSMMNG00015010421) #26 RTL5 (ENSMMNG00015010410) NHSL2 (ENSMMNG00015010379) #28 CXCR3 (ENSMMNG00015010353) ENSMMNG00015010315 ENSMMNG00015010298 ENSMMNG00015010247 ENSMMNG00015010213 ITGB1BP2 (ENSMMNG00015010179) NONO (ENSMMNG00015010158) ZMYM3 (ENSMMNG00015010107) Sperm whale MODERN SPECIES 13 ABCB7 (ENSPCTG00005014159) ENSPCTG00005013967 NEXMIF (ENSPCTG00005013886) RLIM (ENSPCTG00005013848) SLC16A2 (ENSPCTG00005013786) ENSPCTG00005013715 ZCCHC13 (ENSPCTG00005013657) ENSPCTG00005013621 ENSPCTG00005013600 CHIC1 (ENSPCTG00005013523) CDX4 (ENSPCTG00005013461) NAP1L2 (ENSPCTG00005013426) ENSPCTG00005013403 PHKA1 (ENSPCTG00005012900) #21 ENSPCTG00005012840 HDAC8 (ENSPCTG00005012589) #22 CITED1 (ENSPCTG00005012508) #24 RPS4X (ENSPCTG00005012433) #25 ERCC6L (ENSPCTG00005012377) #27 PIN4 (ENSPCTG00005012267) #26 ENSPCTG00005012239 NHSL2 (ENSPCTG00005012113) #28 CXCR3 (ENSPCTG00005012075) ENSPCTG00005012056 ENSPCTG00005012425 TAF1 (ENSPCTG00005011907) ENSPCTG00005011800 ITGB1BP2 (ENSPCTG00005011575) NONO (ENSPCTG00005011492) ZMYM3 (ENSPCTG00005011284) GJB1 (ENSPCTG00005011243) Blue whale MODERN SPECIES 40 UPRT (ENSBMSG00010020790) ABCB7 (ENSBMSG00010020772) ENSBMSG00010020759 NEXMIF (ENSBMSG00010020750) RLIM (ENSBMSG00010020736) ENSBMSG00010020729 SLC16A2 (ENSBMSG00010020722) ENSBMSG00010020715 ZCCHC13 (ENSBMSG00010020707) CHIC1 (ENSBMSG00010020642) CDX4 (ENSBMSG00010020620) ENSBMSG00010020608 ENSBMSG00010020600 ENSBMSG00010020587 PHKA1 (ENSBMSG00010020455) #21 HDAC8 (ENSBMSG00010020145) #22 CITED1 (ENSBMSG00010020081) #24 ENSBMSG00010020072 #25 ERCC6L (ENSBMSG00010020056) #27 PIN4 (ENSBMSG00010020035) #26 RTL5 (ENSBMSG00010020020) NHSL2 (ENSBMSG00010019980) #28 CXCR3 (ENSBMSG00010019965) ENSBMSG00010019935 ENSBMSG00010019866 ENSBMSG00010019843 ITGB1BP2 (ENSBMSG00010019802) NONO (ENSBMSG00010019773) ZMYM3 (ENSBMSG00010019664) GJB1 (ENSBMSG00010019635) ENSBMSG00010019629 Pecora ANCESTRAL SPECIES 27 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.a ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Yarkand deer MODERN SPECIES 1323 ZDHHC15 (ENSCHYG00000011470) UPRT (ENSCHYG00000011786) ABCB7 (ENSCHYG00000012079) ENSCHYG00000013033 NEXMIF (ENSCHYG00000013048) RLIM (ENSCHYG00000013107) SLC16A2 (ENSCHYG00000013135) ENSCHYG00000013216 ENSCHYG00000013357 CHIC1 (ENSCHYG00000013382) CDX4 (ENSCHYG00000013503) NAP1L2 (ENSCHYG00000013551) ENSCHYG00000013611 PHKA1 (ENSCHYG00000014051) #21 ENSCHYG00000021251 HDAC8 (ENSCHYG00000021302) #22 CITED1 (ENSCHYG00000021899) #24 ENSCHYG00000022005 #25 ENSCHYG00000022048 #26 ERCC6L (ENSCHYG00000022233) #27 NHSL2 (ENSCHYG00000022300) #28 RTL5 (ENSCHYG00000022577) ENSCHYG00000022594 #31 CXCR3 (ENSCHYG00000022631) ENSCHYG00000022668 OGT (ENSCHYG00000022764) ENSCHYG00000022934 ENSCHYG00000023878 ITGB1BP2 (ENSCHYG00000023933) ENSCHYG00000024097 NONO (ENSCHYG00000024105) Percora_a ANCESTRAL SPECIES 22 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.a ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Siberian musk deer MODERN SPECIES 9 UPRT (ENSMMSG00000000982) ABCB7 (ENSMMSG00000001025) ENSMMSG00000001187 NEXMIF (ENSMMSG00000001198) RLIM (ENSMMSG00000001223) SLC16A2 (ENSMMSG00000001236) ZCCHC13 (ENSMMSG00000001254) ENSMMSG00000001290 CHIC1 (ENSMMSG00000001301) CDX4 (ENSMMSG00000001319) ENSMMSG00000001340 ENSMMSG00000001364 ENSMMSG00000001383 ENSMMSG00000001396 PHKA1 (ENSMMSG00000001414) #21 HDAC8 (ENSMMSG00000001581) #22 CITED1 (ENSMMSG00000001777) #24 ENSMMSG00000001800 #25 ENSMMSG00000001833 #26 ERCC6L (ENSMMSG00000001868) #27 NHSL2 (ENSMMSG00000001888) #28 RTL5 (ENSMMSG00000001915) Bovidae ANCESTRAL SPECIES 23 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163063 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.a ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 Bovinae ANCESTRAL SPECIES 38 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000160311.`c ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.a ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Bos ANCESTRAL SPECIES 30 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000160311.`c ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.b ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Bos_a ANCESTRAL SPECIES 19 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191.a ENSGT00940000163191.b.a ENSGT00390000015252.s.a.a #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Domestic yak MODERN SPECIES 69 ZDHHC15 (ENSBGRG00000023027) ENSBGRG00000023226 UPRT (ENSBGRG00000023239) ABCB7 (ENSBGRG00000023373) ENSBGRG00000023925 NEXMIF (ENSBGRG00000023961) RLIM (ENSBGRG00000023991) SLC16A2 (ENSBGRG00000024018) ZCCHC13 (ENSBGRG00000024056) ENSBGRG00000024150 ENSBGRG00000024158 CHIC1 (ENSBGRG00000024180) CDX4 (ENSBGRG00000024264) ENSBGRG00000024296 PHKA1 (ENSBGRG00000024454) #21 HDAC8 (ENSBGRG00000025035) #22 CITED1 (ENSBGRG00000025098) #24 ENSBGRG00000025116 ##25 PIN4 (ENSBGRG00000025136) #26 ERCC6L (ENSBGRG00000025193) #27 NHSL2 (ENSBGRG00000025208) #28 ENSBGRG00000025269 ENSBGRG00000025287 ENSBGRG00000025302 #31 ENSBGRG00000025312 CXCR3 (ENSBGRG00000025320) OGT (ENSBGRG00000025338) ENSBGRG00000025461 ENSBGRG00000025796 ITGB1BP2 (ENSBGRG00000025809) NONO (ENSBGRG00000025854) Wild yak MODERN SPECIES 1111 PHKA1 (ENSBMUG00000007877) #21 ENSBMUG00000007798 HDAC8 (ENSBMUG00000007782) #22 SEMA3D (ENSBMUG00000007745) SEMA3A (ENSBMUG00000007717) Bos_b ANCESTRAL SPECIES 12 ENSGT00940000160087 ENSGT00940000163243 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000160311.`c ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00940000163191.a ENSGT00950000182963.b.b #28 ENSGT00940000163191.b.a ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Cow MODERN SPECIES 177 ABCB7 (ENSBTAG00000011028) NEXMIF (ENSBTAG00000000300) RLIM (ENSBTAG00000015630) ENSBTAG00000051929 SLC16A2 (ENSBTAG00000002585) ZCCHC13 (ENSBTAG00000032003) CHIC1 (ENSBTAG00000020826) CDX4 (ENSBTAG00000001726) MGC140080 (ENSBTAG00000050059) ENSBTAG00000053104 ENSBTAG00000052491 ENSBTAG00000051474 ENSBTAG00000050902 ENSBTAG00000051767 #21 PHKA1 (ENSBTAG00000015848) #21 HDAC8 (ENSBTAG00000046092) #22 ENSBTAG00000052692 CITED1 (ENSBTAG00000045925) #24 RPS4X (ENSBTAG00000018800) #25 ERCC6L (ENSBTAG00000005607) #27 PIN4 (ENSBTAG00000047376) #26 NHSL2 (ENSBTAG00000045565) #28 RTL5 (ENSBTAG00000047545) ENSBTAG00000049525 CXCR3 (ENSBTAG00000014798) OGT (ENSBTAG00000000902) ENSBTAG00000006878 ITGB1BP2 (ENSBTAG00000012163) NONO (ENSBTAG00000012152) ZMYM3 (ENSBTAG00000008492) GJB1 (ENSBTAG00000020512) Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005025206 ABCB7 (ENSBIXG00005004343) NEXMIF (ENSBIXG00005025570) RLIM (ENSBIXG00005025624) SLC16A2 (ENSBIXG00005025654) ENSBIXG00005004383 ENSBIXG00005025707 ENSBIXG00005025786 ENSBIXG00005025818 CHIC1 (ENSBIXG00005025937) CDX4 (ENSBIXG00005025966) ENSBIXG00005025997 ENSBIXG00005004436 ENSBIXG00005026017 PHKA1 (ENSBIXG00005006185) #21 HDAC8 (ENSBIXG00005026224) #22 CITED1 (ENSBIXG00005026354) #24 ENSBIXG00005026386 #25 ERCC6L (ENSBIXG00005026427) #27 PIN4 (ENSBIXG00005026438) #26 RTL5 (ENSBIXG00005026448) NHSL2 (ENSBIXG00005007203) #28 ENSBIXG00005026633 ENSBIXG00005026656 #31 ENSBIXG00005026670 #31 ENSBIXG00005004560 #31 ENSBIXG00005026702 ENSBIXG00005004565 ##25 CXCR3 (ENSBIXG00005026720) OGT (ENSBIXG00005026815) ENSBIXG00005027194 Caprinae ANCESTRAL SPECIES 50 ENSGT00940000163372 ENSGT00940000163063 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00960000190675 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.a.b.a #25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191.a ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000163331 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020016579 ENSOARG00020016548 GPR174 (ENSOARG00020016533) ITM2A (ENSOARG00020016499) TBX22 (ENSOARG00020016413) TENT5D (ENSOARG00020016386) BRWD3 (ENSOARG00020015617) HMGN5 (ENSOARG00020015488) ENSOARG00020025731 GLS (ENSOARG00020025702) STAT1 (ENSOARG00020025634) STAT4 (ENSOARG00020025579) ENSOARG00020025556 PHKA1 (ENSOARG00020025431) #21 ENSOARG00020025389 HDAC8 (ENSOARG00020025320) #22 CITED1 (ENSOARG00020025298) #24 ENSOARG00020025291 #25 ERCC6L (ENSOARG00020025281) #27 PIN4 (ENSOARG00020025228) #26 RTL5 (ENSOARG00020025206) NHSL2 (ENSOARG00020025157) #28 CXCR3 (ENSOARG00020025135) OGT (ENSOARG00020025079) ENSOARG00020024804 ENSOARG00020024762 ENSOARG00020024748 ITGB1BP2 (ENSOARG00020024686) NONO (ENSOARG00020024655) ZMYM3 (ENSOARG00020024506) GJB1 (ENSOARG00020024479) Goat DUPLICATION Goat MODERN SPECIES 29 ENSCHIG00000007957 ENSCHIG00000020141 OGT (ENSCHIG00000001994) ENSCHIG00000003495 CXCR3 (ENSCHIG00000014964) ENSCHIG00000020497 #31 ENSCHIG00000015330 FGF16 (ENSCHIG00000011577) RTL5 (ENSCHIG00000009403) NHSL2 (ENSCHIG00000018552) #28 PIN4 (ENSCHIG00000014397) #26 ERCC6L (ENSCHIG00000009967) #27 ENSCHIG00000023292 ##25 CITED1 (ENSCHIG00000019258) #24 PHKA1 (ENSCHIG00000021783) #21 ENSCHIG00000019337 #22 NAP1L2 (ENSCHIG00000016151) ENSCHIG00000020667 ENSCHIG00000006283 CHIC1 (ENSCHIG00000016513) ENSCHIG00000001275 ENSCHIG00000021839 ZCCHC13 (ENSCHIG00000019132) SLC16A2 (ENSCHIG00000015992) RLIM (ENSCHIG00000019610) NEXMIF (ENSCHIG00000014641) ABCB7 (ENSCHIG00000005807) ZDHHC15 (ENSCHIG00000012700) MAGEE2 (ENSCHIG00000007901) HDX (ENSCHIG00000008366) ENSCHIG00000012493 Goat MODERN SPECIES 113 ENSCHIG00000000457 #22 Atlantogenata ANCESTRAL SPECIES 61 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00940000163063 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Xenarthra ANCESTRAL SPECIES ENSGT00940000157843 #22 Sloth MODERN SPECIES 3857 ENSCHOG00000013561 #22 Afrotheria ANCESTRAL SPECIES 71 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.k ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00440000040163 ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a Afrotheria_a ANCESTRAL SPECIES 70 ENSGT00940000160087 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000158214 ENSGT01020000230412.D ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753.k ENSGT00940000159450 ENSGT00950000183041.A.f ENSGT00390000003601.a ENSGT00940000162554 ENSGT00940000163372 ENSGT00940000160311 ENSGT00950000183118.A.c.b #21 ENSGT00940000157843 #22 ENSGT00530000063624.B #24 ENSGT00390000005569.x.b ##25 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #28 ENSGT00940000163191 ENSGT00390000015252 #31 ENSGT01050000244848.B.a.b ENSGT00940000155085.b ENSGT00940000155242 ENSGT00940000159429 ENSGT00940000154442 ENSGT00940000160693 ENSGT01030000234513.B.a ENSGT00940000159580 Elephant MODERN SPECIES 251 ENSLAFG00000030374 PBDC1 (ENSLAFG00000026665) MAGEE2 (ENSLAFG00000000647) ZDHHC15 (ENSLAFG00000008568) UPRT (ENSLAFG00000004685) ABCB7 (ENSLAFG00000008784) NEXMIF (ENSLAFG00000015430) RLIM (ENSLAFG00000004774) SLC16A2 (ENSLAFG00000004618) ZCCHC13 (ENSLAFG00000029278) CHIC1 (ENSLAFG00000018579) CDX4 (ENSLAFG00000016806) NAP1L2 (ENSLAFG00000026154) ENSLAFG00000023096 PHKA1 (ENSLAFG00000006928) #21 HDAC8 (ENSLAFG00000008515) #22 CITED1 (ENSLAFG00000017528) #24 RPS4X (ENSLAFG00000002654) ##25 ERCC6L (ENSLAFG00000014985) #27 PIN4 (ENSLAFG00000018261) #26 ENSLAFG00000000637 #28 ENSLAFG00000030373 #28 RTL5 (ENSLAFG00000028394) ENSLAFG00000032112 #31 ENSLAFG00000027894 #31 CXCR3 (ENSLAFG00000029972) OGT (ENSLAFG00000008655) ENSLAFG00000001269 ITGB1BP2 (ENSLAFG00000000808) NONO (ENSLAFG00000013422) ZMYM3 (ENSLAFG00000022555) Hyrax MODERN SPECIES 3523 ENSPCAG00000007859 #21 ENSPCAG00000007794 #22 Tenrec MODERN SPECIES 4220 HDAC8 (ENSETEG00000019513) #22