Euteleostomi	ANCESTRAL SPECIES	67	ENSGT00940000154096.b.b.b.a	ENSGT00940000163305.b	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000155936.b	ENSGT00530000064185	ENSGT00390000017067	ENSGT00940000161217	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00950000182844.b.a	ENSGT00940000162362	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764	ENSGT00950000182848.d
Sarcopterygii	ANCESTRAL SPECIES	305												ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00950000182844.b.a	ENSGT00940000167629	ENSGT00940000156439	ENSGT00940000162013
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000161541	ENSGT01030000234626.A.b	ENSGT00960000189362	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000167629	ENSGT00940000156439	ENSGT00940000162013	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764	ENSGT00940000160697	ENSGT00940000156618	ENSGT01050000244824.B
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000162013	ENSGT00940000162362	ENSGT00940000167629	ENSGT00940000156439	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b
Mammalia	ANCESTRAL SPECIES	38	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000166577	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000167629	ENSGT00940000156439	ENSGT00940000162013	ENSGT00940000162362	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764	ENSGT00940000160697
Theria	ANCESTRAL SPECIES	4	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000166577	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Glires	ANCESTRAL SPECIES	5	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Pika	MODERN SPECIES	4305															RUNX2 (ENSOPRG00000002943) #21	SUPT3H (ENSOPRG00000002907) #22
Rabbit	MODERN SPECIES	3	TNFRSF21 (ENSOCUG00000016539)	ADGRF1 (ENSOCUG00000022513)	ADGRF5 (ENSOCUG00000001489)	ENSOCUG00000001485	ANKRD66 (ENSOCUG00000029341)	PLA2G7 (ENSOCUG00000000763)	TDRD6 (ENSOCUG00000000760)	SLC25A27 (ENSOCUG00000000758)	CYP39A1 (ENSOCUG00000000754)	RCAN2 (ENSOCUG00000025884)	ENPP5 (ENSOCUG00000012939)	ENPP4 (ENSOCUG00000012928)	CLIC5 (ENSOCUG00000022531)	RUNX2 (ENSOCUG00000011739) #21	ENSOCUG00000031467	SUPT3H (ENSOCUG00000014574) #22	ENSOCUG00000035183	CDC5L (ENSOCUG00000017240)	ENSOCUG00000038161	ENSOCUG00000017227	AARS2 (ENSOCUG00000021422)	TCTE1 (ENSOCUG00000017899)	TMEM151B (ENSOCUG00000024837)	NFKBIE (ENSOCUG00000017894)	SLC35B2 (ENSOCUG00000017893)	HSP90AB1 (ENSOCUG00000012842)	SLC29A1 (ENSOCUG00000017891)	MYMX (ENSOCUG00000034679)	CAPN11 (ENSOCUG00000017535)	ENSOCUG00000015740	TMEM63B (ENSOCUG00000003464)
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Muroidea	ANCESTRAL SPECIES	42	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a	ENSGT00390000016534.A	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Chinese hamster chok1gshd	MODERN SPECIES	165	Tnfrsf21 (ENSCGRG00001006527)	ENSCGRG00001021383	Adgrf1 (ENSCGRG00001022840)	Adgrf5 (ENSCGRG00001012653)	Mep1a (ENSCGRG00001011477)	Ankrd66 (ENSCGRG00001023040)	Pla2g7 (ENSCGRG00001013443)	Tdrd6 (ENSCGRG00001017798)	Slc25a27 (ENSCGRG00001020482)	Cyp39a1 (ENSCGRG00001018255)	Rcan2 (ENSCGRG00001008623)	Enpp5 (ENSCGRG00001021901)	Enpp4 (ENSCGRG00001000243)	ENSCGRG00001006293	Runx2 (ENSCGRG00001008399) #21	Supt3 (ENSCGRG00001012497) #22	ENSCGRG00001019419	Spats1 (ENSCGRG00001021482)	ENSCGRG00001000421	Aars2 (ENSCGRG00001006954)	Tcte1 (ENSCGRG00001023961)	Tmem151b (ENSCGRG00001003709)	Nfkbie (ENSCGRG00001013839)	ENSCGRG00001017772	Hsp90ab1 (ENSCGRG00001021336)	Slc29a1 (ENSCGRG00001023604)	ENSCGRG00001021384	Tmem63b (ENSCGRG00001023855)	Mrpl14 (ENSCGRG00001013490)	Vegfa (ENSCGRG00001021125)	Mrps18a (ENSCGRG00001017882)
Golden Hamster	MODERN SPECIES	649	Adgrf2 (ENSMAUG00000000367)	Cd2ap (ENSMAUG00000002697)	Tnfrsf21 (ENSMAUG00000019589)	Adgrf1 (ENSMAUG00000000448)	Adgrf5 (ENSMAUG00000000876)	Mep1a (ENSMAUG00000011121)	Ankrd66 (ENSMAUG00000018132)	Pla2g7 (ENSMAUG00000019624)	Tdrd6 (ENSMAUG00000001192)	Slc25a27 (ENSMAUG00000013492)	Cyp39a1 (ENSMAUG00000014708)	Rcan2 (ENSMAUG00000016625)	Enpp5 (ENSMAUG00000017567)	Enpp4 (ENSMAUG00000013309)	Runx2 (ENSMAUG00000015728) #21	Supt3 (ENSMAUG00000002447) #22	ENSMAUG00000013120	Spats1 (ENSMAUG00000014422)	Aars2 (ENSMAUG00000015966)	Tcte1 (ENSMAUG00000007852)	Tmem151b (ENSMAUG00000009675)	ENSMAUG00000010907	Nfkbie (ENSMAUG00000012047)	Slc35b2 (ENSMAUG00000017236)	Hsp90ab1 (ENSMAUG00000018422)	Slc29a1 (ENSMAUG00000006341)	Capn11 (ENSMAUG00000001798)	Tmem63b (ENSMAUG00000007946)	Mrpl14 (ENSMAUG00000017756)	Vegfa (ENSMAUG00000007292)	Rsph9 (ENSMAUG00000010828)
Cricetidae_B	ANCESTRAL SPECIES	32	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000016534.A	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Prairie vole	MODERN SPECIES	352	Tnfrsf21 (ENSMOCG00000006431)	ENSMOCG00000008264	ENSMOCG00000015422	Adgrf5 (ENSMOCG00000017906)	Mep1a (ENSMOCG00000021883)	Ankrd66 (ENSMOCG00000000797)	Pla2g7 (ENSMOCG00000000352)	Tdrd6 (ENSMOCG00000005983)	Slc25a27 (ENSMOCG00000005831)	Cyp39a1 (ENSMOCG00000008231)	Rcan2 (ENSMOCG00000020179)	Enpp5 (ENSMOCG00000022512)	Enpp4 (ENSMOCG00000020772)	ENSMOCG00000011235	Runx2 (ENSMOCG00000008760) #21	Supt3 (ENSMOCG00000001470) #22	ENSMOCG00000022910	Spats1 (ENSMOCG00000012845)	Aars2 (ENSMOCG00000016383)	Tcte1 (ENSMOCG00000015670)	Tmem151b (ENSMOCG00000022994)	Nfkbie (ENSMOCG00000005380)	Slc35b2 (ENSMOCG00000016485)	Hsp90ab1 (ENSMOCG00000018428)	Slc29a1 (ENSMOCG00000020636)	Mymx (ENSMOCG00000015430)	Capn11 (ENSMOCG00000012508)	Tmem63b (ENSMOCG00000014333)	Mrpl14 (ENSMOCG00000013481)	1600014C23Rik (ENSMOCG00000015577)	Vegfa (ENSMOCG00000003577)
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	13	Adgrf1 (ENSPEMG00000017538)	Adgrf5 (ENSPEMG00000014879)	Mep1a (ENSPEMG00000012470)	Ankrd66 (ENSPEMG00000022464)	Pla2g7 (ENSPEMG00000021359)	Tdrd6 (ENSPEMG00000025180)	Slc25a27 (ENSPEMG00000021322)	Cyp39a1 (ENSPEMG00000020920)	ENSPEMG00000007589	Rcan2 (ENSPEMG00000022088)	Enpp5 (ENSPEMG00000009544)	Enpp4 (ENSPEMG00000025230)	ENSPEMG00000025325	Runx2 (ENSPEMG00000024867) #21	ENSPEMG00000026605	ENSPEMG00000019806 #22	ENSPEMG00000007860	Spats1 (ENSPEMG00000015089)	Aars2 (ENSPEMG00000022933)	Tcte1 (ENSPEMG00000016228)	Tmem151b (ENSPEMG00000020728)	Nfkbie (ENSPEMG00000009911)	Slc35b2 (ENSPEMG00000010433)	ENSPEMG00000020801	Slc29a1 (ENSPEMG00000012099)	Mymx (ENSPEMG00000031136)	Capn11 (ENSPEMG00000016267)	Tmem63b (ENSPEMG00000020790)	ENSPEMG00000007451	Vegfa (ENSPEMG00000023496)	Mrps18a (ENSPEMG00000000405)
Northern American deer mouse	MODERN SPECIES	3	Rtp1 (ENSPEMG00000014761)	St6gal1 (ENSPEMG00000016299)	Adipoq (ENSPEMG00000031123)	Rfc4 (ENSPEMG00000020418)	ENSPEMG00000021495	ENSPEMG00000009770	ENSPEMG00000021494	Fetub (ENSPEMG00000014946)	ENSPEMG00000028926	Ahsg (ENSPEMG00000014533)	Dnajb11 (ENSPEMG00000011031)	Tbccd1 (ENSPEMG00000014115)	Crygs (ENSPEMG00000017836)	Dgkg (ENSPEMG00000015589)	Etv5 (ENSPEMG00000006146)	ENSPEMG00000024986 #22	ENSPEMG00000030653	Tra2b (ENSPEMG00000020933)	Klhl6 (ENSPEMG00000016219)	Klhl24 (ENSPEMG00000005554)	Yeats2 (ENSPEMG00000016656)	ENSPEMG00000025222	Parl (ENSPEMG00000017067)	Cyp2ab1 (ENSPEMG00000010910)	Abcc5 (ENSPEMG00000009351)	Eif2b5 (ENSPEMG00000009037)	Dvl3 (ENSPEMG00000017805)	Ap2m1 (ENSPEMG00000006895)	Abcf3 (ENSPEMG00000013382)	Vwa5b2 (ENSPEMG00000014803)	Alg3 (ENSPEMG00000011841)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a	ENSGT00390000016534.A	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Mus	ANCESTRAL SPECIES	16	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000168197	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.e.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.e.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
Mouse	MODERN SPECIES	8	Cd2ap (ENSMUSG00000061665)	Tnfrsf21 (ENSMUSG00000023915)	Adgrf1 (ENSMUSG00000041293)	Adgrf5 (ENSMUSG00000056492)	Mep1a (ENSMUSG00000023914)	Ankrd66 (ENSMUSG00000096140)	Pla2g7 (ENSMUSG00000023913)	Tdrd6 (ENSMUSG00000040140)	Slc25a27 (ENSMUSG00000023912)	Cyp39a1 (ENSMUSG00000023963)	Rcan2 (ENSMUSG00000039601)	Enpp5 (ENSMUSG00000023960)	Enpp4 (ENSMUSG00000023961)	Clic5 (ENSMUSG00000023959)	Runx2 (ENSMUSG00000039153) #21	Supt3 (ENSMUSG00000038954) #22	Cdc5l (ENSMUSG00000023932)	Spats1 (ENSMUSG00000023935)	Aars2 (ENSMUSG00000023938)	Tcte1 (ENSMUSG00000023949)	Tmem151b (ENSMUSG00000096847)	Nfkbie (ENSMUSG00000023947)	Slc35b2 (ENSMUSG00000037089)	Hsp90ab1 (ENSMUSG00000023944)	Slc29a1 (ENSMUSG00000023942)	Mymx (ENSMUSG00000079471)	Capn11 (ENSMUSG00000058626)	Tmem63b (ENSMUSG00000036026)	Mrpl14 (ENSMUSG00000023939)	1600014C23Rik (ENSMUSG00000094690)	Vegfa (ENSMUSG00000023951)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.f	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00860000135742	ENSGT00940000157284
spretus	MODERN SPECIES	8	Cd2ap (MGP_SPRETEiJ_G0022537)	Tnfrsf21 (MGP_SPRETEiJ_G0022538)	Adgrf1 (MGP_SPRETEiJ_G0022539)	Adgrf5 (MGP_SPRETEiJ_G0022540)	Mep1a (MGP_SPRETEiJ_G0022541)	Ankrd66 (MGP_SPRETEiJ_G0022542)	Pla2g7 (MGP_SPRETEiJ_G0022543)	Tdrd6 (MGP_SPRETEiJ_G0022544)	Slc25a27 (MGP_SPRETEiJ_G0022545)	Cyp39a1 (MGP_SPRETEiJ_G0022546)	Rcan2 (MGP_SPRETEiJ_G0022547)	Enpp5 (MGP_SPRETEiJ_G0022548)	Enpp4 (MGP_SPRETEiJ_G0022549)	MGP_SPRETEiJ_G0022550	Runx2 (MGP_SPRETEiJ_G0022551) #21	Supt3 (MGP_SPRETEiJ_G0022552) #22	MGP_SPRETEiJ_G0022553	MGP_SPRETEiJ_G0022554	Aars2 (MGP_SPRETEiJ_G0022555)	Tcte1 (MGP_SPRETEiJ_G0022556)	Tmem151b (MGP_SPRETEiJ_G0022557)	Nfkbie (MGP_SPRETEiJ_G0022558)	Slc35b2 (MGP_SPRETEiJ_G0022559)	Hsp90ab1 (MGP_SPRETEiJ_G0022560)	Slc29a1 (MGP_SPRETEiJ_G0022561)	Mymx (MGP_SPRETEiJ_G0022562)	Capn11 (MGP_SPRETEiJ_G0022563)	Tmem63b (MGP_SPRETEiJ_G0022564)	Mrpl14 (MGP_SPRETEiJ_G0022565)	1600014C23Rik (MGP_SPRETEiJ_G0022566)	Vegfa (MGP_SPRETEiJ_G0022567)
Steppe mouse	MODERN SPECIES	3324	ENSMSIG00000002415	Cd2ap (ENSMSIG00000002235)	Tnfrsf21 (ENSMSIG00000002194)	Adgrf1 (ENSMSIG00000002069)	Adgrf5 (ENSMSIG00000024273)	Mep1a (ENSMSIG00000024217)	Ankrd66 (ENSMSIG00000024200)	Pla2g7 (ENSMSIG00000024173)	Tdrd6 (ENSMSIG00000024102)	Cyp39a1 (ENSMSIG00000023994)	Rcan2 (ENSMSIG00000023943)	Enpp5 (ENSMSIG00000023926)	ENSMSIG00000023915	ENSMSIG00000023907	ENSMSIG00000023769 #21	Supt3 (ENSMSIG00000023732) #22	ENSMSIG00000023729	Cdc5l (ENSMSIG00000023681)	ENSMSIG00000023679	ENSMSIG00000023672	Spats1 (ENSMSIG00000023603)	Aars2 (ENSMSIG00000023583)	Tcte1 (ENSMSIG00000023567)	Tmem151b (ENSMSIG00000023557)	Nfkbie (ENSMSIG00000023528)	Slc35b2 (ENSMSIG00000023500)	ENSMSIG00000023496	Slc29a1 (ENSMSIG00000023420)	Mymx (ENSMSIG00000023403)	Capn11 (ENSMSIG00000023352)	Tmem63b (ENSMSIG00000023301)
Ryukyu mouse	MODERN SPECIES	8	Cd2ap (MGP_CAROLIEiJ_G0021625)	Tnfrsf21 (MGP_CAROLIEiJ_G0021626)	Adgrf1 (MGP_CAROLIEiJ_G0021627)	Adgrf5 (MGP_CAROLIEiJ_G0021628)	Mep1a (MGP_CAROLIEiJ_G0021629)	Ankrd66 (MGP_CAROLIEiJ_G0021630)	Pla2g7 (MGP_CAROLIEiJ_G0021631)	Tdrd6 (MGP_CAROLIEiJ_G0021632)	Slc25a27 (MGP_CAROLIEiJ_G0021633)	Cyp39a1 (MGP_CAROLIEiJ_G0021634)	Rcan2 (MGP_CAROLIEiJ_G0021635)	Enpp5 (MGP_CAROLIEiJ_G0021636)	Enpp4 (MGP_CAROLIEiJ_G0021637)	MGP_CAROLIEiJ_G0021638	Runx2 (MGP_CAROLIEiJ_G0021639) #21	Supt3 (MGP_CAROLIEiJ_G0021640) #22	Cdc5l (MGP_CAROLIEiJ_G0021641)	MGP_CAROLIEiJ_G0021642	Aars2 (MGP_CAROLIEiJ_G0021643)	Tcte1 (MGP_CAROLIEiJ_G0021644)	Tmem151b (MGP_CAROLIEiJ_G0021645)	Nfkbie (MGP_CAROLIEiJ_G0021646)	Slc35b2 (MGP_CAROLIEiJ_G0021647)	Hsp90ab1 (MGP_CAROLIEiJ_G0021648)	Slc29a1 (MGP_CAROLIEiJ_G0021649)	MGP_CAROLIEiJ_G0021650	Capn11 (MGP_CAROLIEiJ_G0021651)	Tmem63b (MGP_CAROLIEiJ_G0021652)	Mrpl14 (MGP_CAROLIEiJ_G0021653)	MGP_CAROLIEiJ_G0021654	MGP_CAROLIEiJ_G0021655
Shrew mouse	MODERN SPECIES	9	Cd2ap (MGP_PahariEiJ_G0020617)	Tnfrsf21 (MGP_PahariEiJ_G0020618)	Adgrf1 (MGP_PahariEiJ_G0020619)	Adgrf5 (MGP_PahariEiJ_G0020620)	Mep1a (MGP_PahariEiJ_G0020621)	Ankrd66 (MGP_PahariEiJ_G0020622)	Pla2g7 (MGP_PahariEiJ_G0020623)	Tdrd6 (MGP_PahariEiJ_G0020624)	Slc25a27 (MGP_PahariEiJ_G0020625)	MGP_PahariEiJ_G0020626	Rcan2 (MGP_PahariEiJ_G0020627)	Enpp5 (MGP_PahariEiJ_G0020628)	Enpp4 (MGP_PahariEiJ_G0020629)	MGP_PahariEiJ_G0020630	Runx2 (MGP_PahariEiJ_G0020631) #21	Supt3 (MGP_PahariEiJ_G0020632) #22	MGP_PahariEiJ_G0020633	MGP_PahariEiJ_G0020634	Aars2 (MGP_PahariEiJ_G0020635)	Tcte1 (MGP_PahariEiJ_G0020636)	Tmem151b (MGP_PahariEiJ_G0020637)	Nfkbie (MGP_PahariEiJ_G0020638)	Slc35b2 (MGP_PahariEiJ_G0020639)	MGP_PahariEiJ_G0020640	Slc29a1 (MGP_PahariEiJ_G0020641)	MGP_PahariEiJ_G0020642	Capn11 (MGP_PahariEiJ_G0020643)	Tmem63b (MGP_PahariEiJ_G0020644)	Mrpl14 (MGP_PahariEiJ_G0020645)	1600014C23Rik (MGP_PahariEiJ_G0020646)	Vegfa (MGP_PahariEiJ_G0020647)
Rat	MODERN SPECIES	19	Tnfrsf21 (ENSRNOG00000011517)	Adgrf1 (ENSRNOG00000062544)	Adgrf5 (ENSRNOG00000011154)	Mep1a (ENSRNOG00000011022)	Ankrd66 (ENSRNOG00000068669)	Pla2g7 (ENSRNOG00000025691)	Tdrd6 (ENSRNOG00000025693)	Slc25a27 (ENSRNOG00000010592)	Cyp39a1 (ENSRNOG00000010519)	Rcan2 (ENSRNOG00000010350)	Enpp5 (ENSRNOG00000010232)	Enpp4 (ENSRNOG00000010174)	Clic5 (ENSRNOG00000047218)	Runx2 (ENSRNOG00000020193) #21	Znrd1as (ENSRNOG00000020166)	Supt3h (ENSRNOG00000020153) #22	LOC102551267 (ENSRNOG00000049311)	Cdc5l (ENSRNOG00000019975)	LOC103690502 (ENSRNOG00000064080)	Spats1 (ENSRNOG00000019963)	Tcte1 (ENSRNOG00000065569)	Tmem151b (ENSRNOG00000019961)	Slc35b2 (ENSRNOG00000019900)	Nfkbie (ENSRNOG00000019907)	Hsp90ab1 (ENSRNOG00000019834)	Slc29a1 (ENSRNOG00000019752)	Mymx (ENSRNOG00000042497)	Capn11 (ENSRNOG00000026025)	Tmem63b (ENSRNOG00000019743)	Mrpl14 (ENSRNOG00000019734)	Aars2 (ENSRNOG00000025808)
Upper Galilee mountains blind mole rat	MODERN SPECIES	633															Runx2 (ENSNGAG00000023853) #21	Supt3 (ENSNGAG00000014275) #22	ENSNGAG00000015764	Spats1 (ENSNGAG00000016503)	Aars2 (ENSNGAG00000018985)	Tcte1 (ENSNGAG00000017387)	Tmem151b (ENSNGAG00000021240)	Nfkbie (ENSNGAG00000021559)	Slc35b2 (ENSNGAG00000016794)	Hsp90ab1 (ENSNGAG00000017929)	Slc29a1 (ENSNGAG00000021923)	Capn11 (ENSNGAG00000007388)	Tmem63b (ENSNGAG00000014742)	Mrpl14 (ENSNGAG00000016826)	Vegfa (ENSNGAG00000018293)	Mrps18a (ENSNGAG00000020052)	Rsph9 (ENSNGAG00000020871)
Lesser Egyptian jerboa	MODERN SPECIES	50						Adgrf1 (ENSJJAG00000007919)	ENSJJAG00000012100	Adgrf5 (ENSJJAG00000014446)	Mep1a (ENSJJAG00000021229)	Tdrd6 (ENSJJAG00000022534)	Cyp39a1 (ENSJJAG00000012273)	Rcan2 (ENSJJAG00000017195)	Enpp5 (ENSJJAG00000014824)	ENSJJAG00000018178	Runx2 (ENSJJAG00000020578) #21	Supt3 (ENSJJAG00000000659) #22	ENSJJAG00000012361	ENSJJAG00000012635	Kcnq5 (ENSJJAG00000018050)	ENSJJAG00000000437	ENSJJAG00000017502	B3gat2 (ENSJJAG00000020615)	Smap1 (ENSJJAG00000020642)	Sdhaf4 (ENSJJAG00000023910)	Fam135a (ENSJJAG00000015770)	Col9a1 (ENSJJAG00000023571)	Col19a1 (ENSJJAG00000009642)	Lmbrd1 (ENSJJAG00000021706)	ENSJJAG00000010158	Adgrb3 (ENSJJAG00000010427)	ENSJJAG00000022539
Kangaroo rat	MODERN SPECIES	363	Cd2ap (ENSDORG00000007826)	Tnfrsf21 (ENSDORG00000008533)	Adgrf1 (ENSDORG00000002560)	Adgrf5 (ENSDORG00000002553)	Mep1a (ENSDORG00000002552)	Ankrd66 (ENSDORG00000024304)	ENSDORG00000002551	Tdrd6 (ENSDORG00000023218)	Slc25a27 (ENSDORG00000002547)	Cyp39a1 (ENSDORG00000002546)	Rcan2 (ENSDORG00000002545)	Enpp5 (ENSDORG00000016278)	Enpp4 (ENSDORG00000015218)	ENSDORG00000015217	Runx2 (ENSDORG00000007645) #21	Supt3 (ENSDORG00000007644) #22	ENSDORG00000009131	ENSDORG00000009129	Aars2 (ENSDORG00000002088)	Tcte1 (ENSDORG00000002087)	Tmem151b (ENSDORG00000027493)	Nfkbie (ENSDORG00000010986)	Slc35b2 (ENSDORG00000010985)	Hsp90ab1 (ENSDORG00000010981)	ENSDORG00000006421	Capn11 (ENSDORG00000026068)	Tmem63b (ENSDORG00000008237)	Mrpl14 (ENSDORG00000008236)	ENSDORG00000025211	ENSDORG00000027181	ENSDORG00000023174
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000017276	ZBTB9 (ENSHGLG00000021359)	ENSHGLG00000043131	ENSHGLG00000017582	ENSHGLG00000017591	ENSHGLG00000019206	ENSHGLG00000017183	RCAN2 (ENSHGLG00000033844)	ENSHGLG00000045423	ENPP4 (ENSHGLG00000014196)	ENSHGLG00000037449	ENSHGLG00000011154 #21	ENSHGLG00000032005	ENSHGLG00000040299	ENSHGLG00000042819	ENSHGLG00000011683 #22	CDC5L (ENSHGLG00000011993)	SPATS1 (ENSHGLG00000012136)	AARS2 (ENSHGLG00000012340)	TCTE1 (ENSHGLG00000012480)	TMEM151B (ENSHGLG00000050065)	NFKBIE (ENSHGLG00000012781)	SLC35B2 (ENSHGLG00000013337)	HSP90AB1 (ENSHGLG00000013490)	SLC29A1 (ENSHGLG00000013873)	MYMX (ENSHGLG00000014348)	ENSHGLG00000034302	TMEM63B (ENSHGLG00000014725)	MRPL14 (ENSHGLG00000048124)	VEGFA (ENSHGLG00000045954)	MRPS18A (ENSHGLG00000014356)
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686
Guinea pig	MODERN SPECIES	15	CD2AP (ENSCPOG00000010757)	TNFRSF21 (ENSCPOG00000010287)	ADGRF1 (ENSCPOG00000007461)	ENSCPOG00000020034	ENSCPOG00000011402	ANKRD66 (ENSCPOG00000037432)	PLA2G7 (ENSCPOG00000012786)	TDRD6 (ENSCPOG00000015698)	SLC25A27 (ENSCPOG00000026161)	ENSCPOG00000006726	RCAN2 (ENSCPOG00000033481)	ENPP5 (ENSCPOG00000008753)	ENPP4 (ENSCPOG00000032719)	CLIC5 (ENSCPOG00000036097)	RUNX2 (ENSCPOG00000005277) #21	SUPT3H (ENSCPOG00000024037) #22	CDC5L (ENSCPOG00000000961)	SPATS1 (ENSCPOG00000003588)	AARS2 (ENSCPOG00000009676)	TCTE1 (ENSCPOG00000003889)	TMEM151B (ENSCPOG00000024916)	NFKBIE (ENSCPOG00000020455)	SLC35B2 (ENSCPOG00000032240)	HSP90AB1 (ENSCPOG00000003887)	SLC29A1 (ENSCPOG00000005137)	CAPN11 (ENSCPOG00000020426)	TMEM63B (ENSCPOG00000026287)	MRPL14 (ENSCPOG00000031064)	ENSCPOG00000013559	MRPS18A (ENSCPOG00000022949)	RSPH9 (ENSCPOG00000020076)
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686
Long-tailed chinchilla	MODERN SPECIES	144	CD2AP (ENSCLAG00000009331)	TNFRSF21 (ENSCLAG00000015128)	ADGRF1 (ENSCLAG00000016116)	ADGRF5 (ENSCLAG00000010731)	ENSCLAG00000013170	ANKRD66 (ENSCLAG00000013892)	PLA2G7 (ENSCLAG00000010984)	TDRD6 (ENSCLAG00000009187)	SLC25A27 (ENSCLAG00000016356)	CYP39A1 (ENSCLAG00000011754)	RCAN2 (ENSCLAG00000010862)	ENPP5 (ENSCLAG00000009198)	ENPP4 (ENSCLAG00000013475)	CLIC5 (ENSCLAG00000016434)	RUNX2 (ENSCLAG00000010695) #21	SUPT3H (ENSCLAG00000016818) #22	CDC5L (ENSCLAG00000014884)	SPATS1 (ENSCLAG00000014840)	ENSCLAG00000017834	AARS2 (ENSCLAG00000014983)	TCTE1 (ENSCLAG00000013096)	TMEM151B (ENSCLAG00000016012)	NFKBIE (ENSCLAG00000011710)	SLC35B2 (ENSCLAG00000010878)	HSP90AB1 (ENSCLAG00000015740)	SLC29A1 (ENSCLAG00000010529)	CAPN11 (ENSCLAG00000013084)	TMEM63B (ENSCLAG00000014238)	MRPL14 (ENSCLAG00000016855)	ENSCLAG00000014201	MRPS18A (ENSCLAG00000012929)
Degu	MODERN SPECIES	46	TNFRSF21 (ENSODEG00000014919)	ENSODEG00000020221	ADGRF1 (ENSODEG00000016021)	ADGRF5 (ENSODEG00000016148)	ENSODEG00000015890	ANKRD66 (ENSODEG00000015928)	PLA2G7 (ENSODEG00000015738)	TDRD6 (ENSODEG00000015639)	SLC25A27 (ENSODEG00000015240)	CYP39A1 (ENSODEG00000015974)	RCAN2 (ENSODEG00000015507)	ENPP5 (ENSODEG00000014866)	ENPP4 (ENSODEG00000015367)	CLIC5 (ENSODEG00000015858)	RUNX2 (ENSODEG00000015699) #21	SUPT3H (ENSODEG00000015634) #22	ENSODEG00000016394	CDC5L (ENSODEG00000017235)	SPATS1 (ENSODEG00000016233)	AARS2 (ENSODEG00000015674)	TCTE1 (ENSODEG00000015122)	TMEM151B (ENSODEG00000015150)	NFKBIE (ENSODEG00000015243)	SLC35B2 (ENSODEG00000015458)	ENSODEG00000015488	ENSODEG00000015863	CAPN11 (ENSODEG00000015728)	TMEM63B (ENSODEG00000015474)	MRPL14 (ENSODEG00000015718)	ENSODEG00000016904	MRPS18A (ENSODEG00000015388)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00960000190714	ENSGT00940000157284
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00960000190714	ENSGT00940000157284
Arctic ground squirrel	MODERN SPECIES	138	CD2AP (ENSUPAG00010004961)	TNFRSF21 (ENSUPAG00010004954)	ADGRF1 (ENSUPAG00010004833)	ADGRF5 (ENSUPAG00010004787)	ENSUPAG00010004757	ANKRD66 (ENSUPAG00010004750)	PLA2G7 (ENSUPAG00010004739)	TDRD6 (ENSUPAG00010004678)	SLC25A27 (ENSUPAG00010004665)	CYP39A1 (ENSUPAG00010004555)	RCAN2 (ENSUPAG00010004530)	ENPP5 (ENSUPAG00010004521)	ENPP4 (ENSUPAG00010004511)	CLIC5 (ENSUPAG00010004493)	RUNX2 (ENSUPAG00010004197) #21	SUPT3H (ENSUPAG00010004183) #22	CDC5L (ENSUPAG00010004167)	SPATS1 (ENSUPAG00010004153)	AARS2 (ENSUPAG00010004131)	ENSUPAG00010004124	TMEM151B (ENSUPAG00010004120)	NFKBIE (ENSUPAG00010004104)	SLC35B2 (ENSUPAG00010004089)	ENSUPAG00010004086	ENSUPAG00010004079	SLC29A1 (ENSUPAG00010003804)	MYMX (ENSUPAG00010003794)	CAPN11 (ENSUPAG00010003744)	TMEM63B (ENSUPAG00010003679)	MRPL14 (ENSUPAG00010003668)	ENSUPAG00010003659
Squirrel	MODERN SPECIES	76	CD2AP (ENSSTOG00000020744)	TNFRSF21 (ENSSTOG00000023860)	ADGRF1 (ENSSTOG00000031084)	ADGRF5 (ENSSTOG00000009537)	ENSSTOG00000009527	ANKRD66 (ENSSTOG00000023107)	PLA2G7 (ENSSTOG00000009508)	TDRD6 (ENSSTOG00000028193)	SLC25A27 (ENSSTOG00000009477)	CYP39A1 (ENSSTOG00000031972)	RCAN2 (ENSSTOG00000004809)	ENPP5 (ENSSTOG00000011895)	ENPP4 (ENSSTOG00000011891)	CLIC5 (ENSSTOG00000028761)	RUNX2 (ENSSTOG00000010163) #21	SUPT3H (ENSSTOG00000015411) #22	CDC5L (ENSSTOG00000016173)	SPATS1 (ENSSTOG00000025344)	AARS2 (ENSSTOG00000013499)	TCTE1 (ENSSTOG00000033904)	TMEM151B (ENSSTOG00000013488)	NFKBIE (ENSSTOG00000013475)	SLC35B2 (ENSSTOG00000026446)	HSP90AB1 (ENSSTOG00000024614)	SLC29A1 (ENSSTOG00000003337)	MYMX (ENSSTOG00000030271)	CAPN11 (ENSSTOG00000003304)	TMEM63B (ENSSTOG00000007096)	MRPL14 (ENSSTOG00000004549)	VEGFA (ENSSTOG00000008877)	MRPS18A (ENSSTOG00000004490)
Alpin marmot	MODERN SPECIES	20	ENSMMMG00000024603	TNFRSF21 (ENSMMMG00000024602)	ADGRF1 (ENSMMMG00000024601)	ADGRF5 (ENSMMMG00000024600)	ENSMMMG00000024599	ANKRD66 (ENSMMMG00000024598)	PLA2G7 (ENSMMMG00000024596)	TDRD6 (ENSMMMG00000024595)	SLC25A27 (ENSMMMG00000024594)	CYP39A1 (ENSMMMG00000024593)	RCAN2 (ENSMMMG00000024592)	ENPP5 (ENSMMMG00000024590)	ENPP4 (ENSMMMG00000024589)	CLIC5 (ENSMMMG00000024588)	ENSMMMG00000024586	SUPT3H (ENSMMMG00000024585) #22	CDC5L (ENSMMMG00000024584)	AARS2 (ENSMMMG00000024582)	TCTE1 (ENSMMMG00000024581)	TMEM151B (ENSMMMG00000024580)	NFKBIE (ENSMMMG00000024579)	SLC35B2 (ENSMMMG00000024578)	HSP90AB1 (ENSMMMG00000024577)	SLC29A1 (ENSMMMG00000024571)	MYMX (ENSMMMG00000024570)	CAPN11 (ENSMMMG00000024569)	TMEM63B (ENSMMMG00000024568)	MRPL14 (ENSMMMG00000024567)	ENSMMMG00000024566	VEGFA (ENSMMMG00000024565)	MRPS18A (ENSMMMG00000024564)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005008837	PCMTD1 (ENSSVLG00005008801)	PXDNL (ENSSVLG00005008684)	SNTG1 (ENSSVLG00005007613)	PPDPFL (ENSSVLG00005007203)	ENSSVLG00005007187	SNAI2 (ENSSVLG00005007170)	ENSSVLG00005007144	CLXN (ENSSVLG00005007101)	ENSSVLG00005007072	ENSSVLG00005007058	ENSSVLG00005007040	UBE2V2 (ENSSVLG00005006994)	MCM4 (ENSSVLG00005006762)	CEBPD (ENSSVLG00005006258)	SUPT3H (ENSSVLG00005006225) #22	ENSSVLG00005006182	SPIDR (ENSSVLG00005005941)	ENSSVLG00005005907	HSD17B7 (ENSSVLG00005005883)	DDR2 (ENSSVLG00005005804)	UAP1 (ENSSVLG00005005747)	UHMK1 (ENSSVLG00005005691)	SH2D1B (ENSSVLG00005015442)	SPATA46 (ENSSVLG00005015397)	ENSSVLG00005015344	ENSSVLG00005015160	OLFML2B (ENSSVLG00005015059)	ENSSVLG00005014975	ATF6 (ENSSVLG00005014934)	ENSSVLG00005014905
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005012093	TNFRSF21 (ENSSVLG00005012308)	ADGRF1 (ENSSVLG00005012402)	ADGRF5 (ENSSVLG00005012696)	MEP1A (ENSSVLG00005012939)	ANKRD66 (ENSSVLG00005013047)	PLA2G7 (ENSSVLG00005013209)	TDRD6 (ENSSVLG00005013379)	SLC25A27 (ENSSVLG00005013485)	CYP39A1 (ENSSVLG00005004271)	RCAN2 (ENSSVLG00005004330)	ENPP5 (ENSSVLG00005004369)	ENPP4 (ENSSVLG00005004390)	CLIC5 (ENSSVLG00005004461)	RUNX2 (ENSSVLG00005004619) #21	ENSSVLG00005004703 #22	ENSSVLG00005004758	CDC5L (ENSSVLG00005004771)	AARS2 (ENSSVLG00005004851)	TCTE1 (ENSSVLG00005004874)	TMEM151B (ENSSVLG00005004904)	NFKBIE (ENSSVLG00005004924)	SLC35B2 (ENSSVLG00005004954)	HSP90AB1 (ENSSVLG00005004982)	SLC29A1 (ENSSVLG00005004999)	MYMX (ENSSVLG00005005017)	CAPN11 (ENSSVLG00005005041)	TMEM63B (ENSSVLG00005005124)	MRPL14 (ENSSVLG00005005175)	VEGFA (ENSSVLG00005005248)	MRPS18A (ENSSVLG00005005389)
Tree shrew	MODERN SPECIES	4874															ENSTBEG00000012907	SUPT3H (ENSTBEG00000012619) #22
Primates	ANCESTRAL SPECIES	5	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Bushbaby	MODERN SPECIES	146	CD2AP (ENSOGAG00000002047)	TNFRSF21 (ENSOGAG00000000190)	ADGRF1 (ENSOGAG00000000410)	ADGRF5 (ENSOGAG00000000408)	ENSOGAG00000000407	ANKRD66 (ENSOGAG00000025136)	PLA2G7 (ENSOGAG00000000406)	TDRD6 (ENSOGAG00000000404)	SLC25A27 (ENSOGAG00000000402)	CYP39A1 (ENSOGAG00000000401)	RCAN2 (ENSOGAG00000024331)	ENPP5 (ENSOGAG00000014380)	ENPP4 (ENSOGAG00000014378)	CLIC5 (ENSOGAG00000014373)	RUNX2 (ENSOGAG00000003900) #21	SUPT3H (ENSOGAG00000003895) #22	CDC5L (ENSOGAG00000008211)	SPATS1 (ENSOGAG00000008206)	AARS2 (ENSOGAG00000008197)	TCTE1 (ENSOGAG00000034227)	TMEM151B (ENSOGAG00000032467)	NFKBIE (ENSOGAG00000028890)	SLC35B2 (ENSOGAG00000029873)	ENSOGAG00000011961	SLC29A1 (ENSOGAG00000011955)	CAPN11 (ENSOGAG00000012715)	TMEM63B (ENSOGAG00000001281)	MRPL14 (ENSOGAG00000024589)	ENSOGAG00000000338	MRPS18A (ENSOGAG00000026551)	RSPH9 (ENSOGAG00000016981)
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Mouse lemur	MODERN SPECIES	28	ENSMICG00000033055	CD2AP (ENSMICG00000015240)	ENSMICG00000041964	TNFRSF21 (ENSMICG00000017760)	ADGRF1 (ENSMICG00000017759)	ADGRF5 (ENSMICG00000017758)	MEP1A (ENSMICG00000017757)	ANKRD66 (ENSMICG00000034397)	PLA2G7 (ENSMICG00000017756)	TDRD6 (ENSMICG00000030777)	RCAN2 (ENSMICG00000030471)	ENPP5 (ENSMICG00000017751)	ENPP4 (ENSMICG00000031250)	CLIC5 (ENSMICG00000034568)	RUNX2 (ENSMICG00000012251) #21	SUPT3H (ENSMICG00000012239) #22	CDC5L (ENSMICG00000006933)	SPATS1 (ENSMICG00000043772)	ENSMICG00000042468	AARS2 (ENSMICG00000013453)	TMEM151B (ENSMICG00000033230)	TCTE1 (ENSMICG00000013443)	NFKBIE (ENSMICG00000013421)	SLC35B2 (ENSMICG00000027103)	ENSMICG00000013394	SLC29A1 (ENSMICG00000038074)	CAPN11 (ENSMICG00000013043)	TMEM63B (ENSMICG00000013024)	MRPL14 (ENSMICG00000013022)	VEGFA (ENSMICG00000005068)	MRPS18A (ENSMICG00000005062)
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Greater bamboo lemur	MODERN SPECIES	305	CD2AP (ENSPSMG00000019489)	TNFRSF21 (ENSPSMG00000019413)	ADGRF1 (ENSPSMG00000019400)	ADGRF5 (ENSPSMG00000019382)	MEP1A (ENSPSMG00000019358)	PLA2G7 (ENSPSMG00000019341)	TDRD6 (ENSPSMG00000019329)	SLC25A27 (ENSPSMG00000019304)	CYP39A1 (ENSPSMG00000019279)	RCAN2 (ENSPSMG00000019260)	ENSPSMG00000019249	ENPP5 (ENSPSMG00000019246)	ENPP4 (ENSPSMG00000019241)	CLIC5 (ENSPSMG00000019221)	RUNX2 (ENSPSMG00000019192) #21	SUPT3H (ENSPSMG00000019156) #22	CDC5L (ENSPSMG00000019139)	SPATS1 (ENSPSMG00000019112)	AARS2 (ENSPSMG00000019100)	TCTE1 (ENSPSMG00000019053)	TMEM151B (ENSPSMG00000019047)	NFKBIE (ENSPSMG00000019044)	SLC35B2 (ENSPSMG00000019040)	HSP90AB1 (ENSPSMG00000018961)	SLC29A1 (ENSPSMG00000018858)	MYMX (ENSPSMG00000018800)	CAPN11 (ENSPSMG00000018791)	TMEM63B (ENSPSMG00000018668)	MRPL14 (ENSPSMG00000018525)	VEGFA (ENSPSMG00000018375)	MRPS18A (ENSPSMG00000018246)
Coquerels sifaka	MODERN SPECIES	1000	ENSPCOG00000000466	ADGRF1 (ENSPCOG00000016750)	ADGRF5 (ENSPCOG00000014671)	MEP1A (ENSPCOG00000014912)	ANKRD66 (ENSPCOG00000020836)	PLA2G7 (ENSPCOG00000022985)	TDRD6 (ENSPCOG00000011534)	SLC25A27 (ENSPCOG00000020287)	CYP39A1 (ENSPCOG00000018854)	ENSPCOG00000007203	RCAN2 (ENSPCOG00000017008)	ENPP5 (ENSPCOG00000016709)	ENPP4 (ENSPCOG00000018525)	CLIC5 (ENSPCOG00000024178)	RUNX2 (ENSPCOG00000010909) #21	SUPT3H (ENSPCOG00000009135) #22
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Tarsier	MODERN SPECIES	6296																ENSTSYG00000000815 #22	CDC5L (ENSTSYG00000013155)	SPATS1 (ENSTSYG00000001496)	ENSTSYG00000031213	AARS2 (ENSTSYG00000003694)	TCTE1 (ENSTSYG00000035879)	ENSTSYG00000032860	NFKBIE (ENSTSYG00000003458)	SLC35B2 (ENSTSYG00000025846)	HSP90AB1 (ENSTSYG00000008319)	SLC29A1 (ENSTSYG00000000940)
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000156212	ENSGT00910000147233.a	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000156212	ENSGT00910000147233.a	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a.l	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Marmoset	MODERN SPECIES	16	ADGRF1 (ENSCJAG00000011931)	ADGRF5 (ENSCJAG00000011952)	ENSCJAG00000078947	ENSCJAG00000012000	ANKRD66 (ENSCJAG00000044505)	PLA2G7 (ENSCJAG00000040484)	TDRD6 (ENSCJAG00000012035)	SLC25A27 (ENSCJAG00000012042)	CYP39A1 (ENSCJAG00000012072)	RCAN2 (ENSCJAG00000012084)	ENPP5 (ENSCJAG00000012097)	ENPP4 (ENSCJAG00000012114)	ENSCJAG00000070584	CLIC5 (ENSCJAG00000039777)	RUNX2 (ENSCJAG00000012153) #21	SUPT3H (ENSCJAG00000012182) #22	ENSCJAG00000076205	CDC5L (ENSCJAG00000012210)	ENSCJAG00000055470	SPATS1 (ENSCJAG00000012267)	AARS2 (ENSCJAG00000048207)	TCTE1 (ENSCJAG00000012297)	TMEM151B (ENSCJAG00000012307)	NFKBIE (ENSCJAG00000062014)	SLC35B2 (ENSCJAG00000046050)	HSP90AB1 (ENSCJAG00000046966)	SLC29A1 (ENSCJAG00000012328)	MYMX (ENSCJAG00000022396)	ENSCJAG00000046846	CAPN11 (ENSCJAG00000012346)	TMEM63B (ENSCJAG00000012369)
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00940000156212	ENSGT00910000147233.a	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a.l	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Capuchin	MODERN SPECIES	197																SUPT3H (ENSCCAG00000018532) #22	ENSCCAG00000027194	CDC5L (ENSCCAG00000032324)	SPATS1 (ENSCCAG00000034031)	AARS2 (ENSCCAG00000034130)	TCTE1 (ENSCCAG00000024271)	TMEM151B (ENSCCAG00000020071)	NFKBIE (ENSCCAG00000021383)	SLC35B2 (ENSCCAG00000036364)	ENSCCAG00000028238	SLC29A1 (ENSCCAG00000037630)	ENSCCAG00000036544	CAPN11 (ENSCCAG00000030442)	TMEM63B (ENSCCAG00000000296)	MRPL14 (ENSCCAG00000010453)	ENSCCAG00000024490
Bolivian squirrel monkey	MODERN SPECIES	49	TNFRSF21 (ENSSBOG00000027394)	ADGRF1 (ENSSBOG00000035118)	ADGRF5 (ENSSBOG00000034239)	ENSSBOG00000025128	ANKRD66 (ENSSBOG00000019991)	PLA2G7 (ENSSBOG00000032856)	TDRD6 (ENSSBOG00000031889)	SLC25A27 (ENSSBOG00000020803)	CYP39A1 (ENSSBOG00000028378)	RCAN2 (ENSSBOG00000024215)	ENPP5 (ENSSBOG00000032948)	ENPP4 (ENSSBOG00000033707)	CLIC5 (ENSSBOG00000025831)	RUNX2 (ENSSBOG00000032519) #21	ENSSBOG00000020940	SUPT3H (ENSSBOG00000035860) #22	ENSSBOG00000023875	CDC5L (ENSSBOG00000031265)	SPATS1 (ENSSBOG00000035876)	AARS2 (ENSSBOG00000018590)	TCTE1 (ENSSBOG00000030713)	TMEM151B (ENSSBOG00000020161)	NFKBIE (ENSSBOG00000005172)	SLC35B2 (ENSSBOG00000028774)	ENSSBOG00000023571	SLC29A1 (ENSSBOG00000025930)	MYMX (ENSSBOG00000019228)	ENSSBOG00000033471	CAPN11 (ENSSBOG00000026495)	TMEM63B (ENSSBOG00000035379)	MRPL14 (ENSSBOG00000028248)
Mas night monkey	MODERN SPECIES	882		ENSANAG00000019134	ADGRF1 (ENSANAG00000010455)	ADGRF5 (ENSANAG00000025666)	ENSANAG00000030110	ANKRD66 (ENSANAG00000022889)	PLA2G7 (ENSANAG00000036059)	TDRD6 (ENSANAG00000004725)	SLC25A27 (ENSANAG00000022880)	CYP39A1 (ENSANAG00000037879)	RCAN2 (ENSANAG00000038243)	ENPP5 (ENSANAG00000016883)	ENPP4 (ENSANAG00000035380)	CLIC5 (ENSANAG00000028093)	RUNX2 (ENSANAG00000034292) #21	SUPT3H (ENSANAG00000035432) #22	ENSANAG00000038340	CDC5L (ENSANAG00000028499)	SPATS1 (ENSANAG00000025333)	AARS2 (ENSANAG00000019918)	TMEM151B (ENSANAG00000031535)	TCTE1 (ENSANAG00000037976)	NFKBIE (ENSANAG00000035565)	SLC35B2 (ENSANAG00000030995)	ENSANAG00000036841	SLC29A1 (ENSANAG00000027374)	MYMX (ENSANAG00000019285)	CAPN11 (ENSANAG00000021503)	ENSANAG00000022828	TMEM63B (ENSANAG00000025745)	MRPL14 (ENSANAG00000025052)
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Vervet Monkey	MODERN SPECIES	8	CD2AP (ENSCSAG00000012642)	TNFRSF21 (ENSCSAG00000012632)	ADGRF1 (ENSCSAG00000012625)	ADGRF5 (ENSCSAG00000012612)	MEP1A (ENSCSAG00000012602)	ANKRD66 (ENSCSAG00000012599)	PLA2G7 (ENSCSAG00000012591)	TDRD6 (ENSCSAG00000012578)	SLC25A27 (ENSCSAG00000012568)	CYP39A1 (ENSCSAG00000012561)	RCAN2 (ENSCSAG00000012557)	ENPP5 (ENSCSAG00000012552)	ENPP4 (ENSCSAG00000012547)	CLIC5 (ENSCSAG00000012542)	RUNX2 (ENSCSAG00000012528) #21	SUPT3H (ENSCSAG00000012475) #22	CDC5L (ENSCSAG00000012464)	ENSCSAG00000019298	SPATS1 (ENSCSAG00000012454)	AARS2 (ENSCSAG00000012446)	TCTE1 (ENSCSAG00000012432)	TMEM151B (ENSCSAG00000012429)	NFKBIE (ENSCSAG00000012428)	HSP90AB1 (ENSCSAG00000012423)	SLC35B2 (ENSCSAG00000012413)	SLC29A1 (ENSCSAG00000012409)	CAPN11 (ENSCSAG00000012369)	TMEM63B (ENSCSAG00000012227)	ENSCSAG00000012220	ENSCSAG00000012214	VEGFA (ENSCSAG00000012195)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085	ENSGT00940000157284
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686
Crab-eating macaque	MODERN SPECIES	14	ADGRF1 (ENSMFAG00000022221)	ADGRF5 (ENSMFAG00000037042)	MEP1A (ENSMFAG00000034108)	ANKRD66 (ENSMFAG00000046275)	PLA2G7 (ENSMFAG00000000129)	TDRD6 (ENSMFAG00000059477)	SLC25A27 (ENSMFAG00000031954)	CYP39A1 (ENSMFAG00000021727)	RCAN2 (ENSMFAG00000036451)	ENSMFAG00000059244	ENPP5 (ENSMFAG00000035447)	ENPP4 (ENSMFAG00000044542)	CLIC5 (ENSMFAG00000005042)	RUNX2 (ENSMFAG00000036650) #21	ENSMFAG00000054228	SUPT3H (ENSMFAG00000020326) #22	CDC5L (ENSMFAG00000000812)	SPATS1 (ENSMFAG00000003881)	SLC29A1 (ENSMFAG00000038090)	AARS2 (ENSMFAG00000037353)	ENSMFAG00000037645	TCTE1 (ENSMFAG00000033042)	TMEM63B (ENSMFAG00000041643)	NFKBIE (ENSMFAG00000037930)	SLC35B2 (ENSMFAG00000037986)	HSP90AB1 (ENSMFAG00000038525)	MRPL14 (ENSMFAG00000041809)	ENSMFAG00000059266	VEGFA (ENSMFAG00000043991)	MRPS18A (ENSMFAG00000038311)	RSPH9 (ENSMFAG00000003254)
Rhesus	MODERN SPECIES	14	TNFRSF21 (ENSMMUG00000011905)	ADGRF1 (ENSMMUG00000022983)	ADGRF5 (ENSMMUG00000023002)	MEP1A (ENSMMUG00000023000)	ANKRD66 (ENSMMUG00000042154)	PLA2G7 (ENSMMUG00000019254)	TDRD6 (ENSMMUG00000019252)	SLC25A27 (ENSMMUG00000019250)	CYP39A1 (ENSMMUG00000055199)	RCAN2 (ENSMMUG00000019246)	ENSMMUG00000063124	ENPP5 (ENSMMUG00000051876)	ENPP4 (ENSMMUG00000042260)	CLIC5 (ENSMMUG00000003511)	RUNX2 (ENSMMUG00000019819) #21	SUPT3H (ENSMMUG00000021377) #22	ENSMMUG00000057422	CDC5L (ENSMMUG00000014389)	SPATS1 (ENSMMUG00000014388)	ENSMMUG00000054860	AARS2 (ENSMMUG00000014387)	TCTE1 (ENSMMUG00000014386)	TMEM151B (ENSMMUG00000017030)	NFKBIE (ENSMMUG00000022689)	SLC35B2 (ENSMMUG00000022687)	HSP90AB1 (ENSMMUG00000022685)	TMEM63B (ENSMMUG00000016230)	MRPL14 (ENSMMUG00000055882)	LINC03040 (ENSMMUG00000011364)	VEGFA (ENSMMUG00000004577)	ENSMMUG00000060582
Pig-tailed macaque	MODERN SPECIES	157												ENPP5 (ENSMNEG00000029270)	ENPP4 (ENSMNEG00000029543)	CLIC5 (ENSMNEG00000040569)	RUNX2 (ENSMNEG00000042849) #21	SUPT3H (ENSMNEG00000029500) #22	CDC5L (ENSMNEG00000036577)	SPATS1 (ENSMNEG00000033305)	AARS2 (ENSMNEG00000029416)	TMEM151B (ENSMNEG00000043452)	TCTE1 (ENSMNEG00000029274)	SLC35B2 (ENSMNEG00000008714)	HSP90AB1 (ENSMNEG00000034241)	SLC29A1 (ENSMNEG00000029998)	MYMX (ENSMNEG00000010782)	CAPN11 (ENSMNEG00000029403)	TMEM63B (ENSMNEG00000039311)	MRPL14 (ENSMNEG00000034641)	ENSMNEG00000029690	VEGFA (ENSMNEG00000041005)	MRPS18A (ENSMNEG00000044642)
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Olive baboon	MODERN SPECIES	16	CD2AP (ENSPANG00000026002)	TNFRSF21 (ENSPANG00000026236)	ADGRF1 (ENSPANG00000022876)	ADGRF5 (ENSPANG00000008646)	MEP1A (ENSPANG00000005760)	ANKRD66 (ENSPANG00000016796)	PLA2G7 (ENSPANG00000016922)	TDRD6 (ENSPANG00000005761)	SLC25A27 (ENSPANG00000009399)	CYP39A1 (ENSPANG00000009400)	RCAN2 (ENSPANG00000000545)	ENPP5 (ENSPANG00000008268)	ENPP4 (ENSPANG00000000926)	CLIC5 (ENSPANG00000024966)	RUNX2 (ENSPANG00000006186) #21	SUPT3H (ENSPANG00000022344) #22	ENSPANG00000049227	CDC5L (ENSPANG00000018654)	SPATS1 (ENSPANG00000024568)	AARS2 (ENSPANG00000004773)	TCTE1 (ENSPANG00000017777)	TMEM151B (ENSPANG00000017776)	NFKBIE (ENSPANG00000022206)	SLC35B2 (ENSPANG00000047147)	HSP90AB1 (ENSPANG00000000442)	SLC29A1 (ENSPANG00000023625)	MYMX (ENSPANG00000034855)	CAPN11 (ENSPANG00000023068)	TMEM63B (ENSPANG00000023571)	ENSPANG00000046969	ENSPANG00000005020
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00950000182960.a.a.a.a.b.rb.u.b.a	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085	ENSGT00940000157284
Sooty mangabey	MODERN SPECIES	97	ADGRF1 (ENSCATG00000022267)	ADGRF5 (ENSCATG00000036293)	MEP1A (ENSCATG00000043696)	ANKRD66 (ENSCATG00000040079)	PLA2G7 (ENSCATG00000041088)	TDRD6 (ENSCATG00000023914)	SLC25A27 (ENSCATG00000030691)	CYP39A1 (ENSCATG00000034914)	RCAN2 (ENSCATG00000041034)	ENSCATG00000040982	ENPP5 (ENSCATG00000042109)	ENPP4 (ENSCATG00000043419)	ENSCATG00000031136	CLIC5 (ENSCATG00000015665)	RUNX2 (ENSCATG00000037036) #21	SUPT3H (ENSCATG00000030142) #22	CDC5L (ENSCATG00000038925)	SPATS1 (ENSCATG00000035034)	AARS2 (ENSCATG00000033744)	TMEM151B (ENSCATG00000044696)	TCTE1 (ENSCATG00000032513)	NFKBIE (ENSCATG00000027685)	SLC35B2 (ENSCATG00000029059)	HSP90AB1 (ENSCATG00000035400)	SLC29A1 (ENSCATG00000025154)	MYMX (ENSCATG00000020334)	CAPN11 (ENSCATG00000040416)	TMEM63B (ENSCATG00000041638)	MRPL14 (ENSCATG00000027037)	ENSCATG00000029856	VEGFA (ENSCATG00000030128)
Drill	MODERN SPECIES	941	ADGRF1 (ENSMLEG00000013388)	ADGRF5 (ENSMLEG00000013060)	MEP1A (ENSMLEG00000038732)	ANKRD66 (ENSMLEG00000042482)	PLA2G7 (ENSMLEG00000025348)	TDRD6 (ENSMLEG00000039418)	SLC25A27 (ENSMLEG00000033730)	CYP39A1 (ENSMLEG00000032868)	RCAN2 (ENSMLEG00000039961)	ENSMLEG00000037782	ENPP5 (ENSMLEG00000025172)	ENSMLEG00000043859	ENPP4 (ENSMLEG00000035378)	CLIC5 (ENSMLEG00000028897)	RUNX2 (ENSMLEG00000029720) #21	SUPT3H (ENSMLEG00000038549) #22	CDC5L (ENSMLEG00000030582)	SPATS1 (ENSMLEG00000032849)	AARS2 (ENSMLEG00000035617)	TCTE1 (ENSMLEG00000034744)	ENSMLEG00000039771	NFKBIE (ENSMLEG00000038934)	SLC35B2 (ENSMLEG00000021766)	HSP90AB1 (ENSMLEG00000024522)	SLC29A1 (ENSMLEG00000037598)	MYMX (ENSMLEG00000024197)	CAPN11 (ENSMLEG00000032534)	TMEM63B (ENSMLEG00000036196)	MRPL14 (ENSMLEG00000030732)	ENSMLEG00000032234	ENSMLEG00000038668
Rhinopithecus	ANCESTRAL SPECIES	26	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00910000147751	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085	ENSGT00940000157284	ENSGT00390000006493.g
Golden snub-nosed monkey	MODERN SPECIES	1681														CLIC5 (ENSRROG00000043685)	RUNX2 (ENSRROG00000037385) #21	SUPT3H (ENSRROG00000007028) #22
Black snub-nosed monkey	MODERN SPECIES	593					ENSRBIG00000044784	ANKRD66 (ENSRBIG00000044788)	PLA2G7 (ENSRBIG00000028017)	TDRD6 (ENSRBIG00000030252)	SLC25A27 (ENSRBIG00000040708)	CYP39A1 (ENSRBIG00000042393)	RCAN2 (ENSRBIG00000029400)	ENPP5 (ENSRBIG00000042245)	ENPP4 (ENSRBIG00000037213)	CLIC5 (ENSRBIG00000037731)	RUNX2 (ENSRBIG00000027691) #21	SUPT3H (ENSRBIG00000029800) #22	CDC5L (ENSRBIG00000037455)	SPATS1 (ENSRBIG00000028383)	AARS2 (ENSRBIG00000028209)	TCTE1 (ENSRBIG00000032918)	TMEM151B (ENSRBIG00000028145)	NFKBIE (ENSRBIG00000031489)	SLC35B2 (ENSRBIG00000034146)	ENSRBIG00000042211	SLC29A1 (ENSRBIG00000042697)	CAPN11 (ENSRBIG00000011545)	TMEM63B (ENSRBIG00000044671)	MRPL14 (ENSRBIG00000033909)	ENSRBIG00000039088	VEGFA (ENSRBIG00000041235)	MRPS18A (ENSRBIG00000028789)
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Gibbon	MODERN SPECIES	7	SCN2A (ENSNLEG00000003112)	CSRNP3 (ENSNLEG00000003202)	GALNT3 (ENSNLEG00000003208)	TTC21B (ENSNLEG00000003246)	SCN1A (ENSNLEG00000003278)	SCN9A (ENSNLEG00000003419)	SCN7A (ENSNLEG00000003497)	XIRP2 (ENSNLEG00000003552)	ENSNLEG00000032563	B3GALT1 (ENSNLEG00000019016)	ENSNLEG00000032686	STK39 (ENSNLEG00000003560)	ENPP4 (ENSNLEG00000003581)	ENSNLEG00000003594	ENSNLEG00000003611 #21	SUPT3H (ENSNLEG00000032331) #22	ENSNLEG00000019017	CDC5L (ENSNLEG00000003627)	SPATS1 (ENSNLEG00000003651)	AARS2 (ENSNLEG00000026583)	TCTE1 (ENSNLEG00000003668)	TMEM151B (ENSNLEG00000003670)	ENSNLEG00000003672	SLC35B2 (ENSNLEG00000003703)	ENSNLEG00000029372	SLC29A1 (ENSNLEG00000003716)	MYMX (ENSNLEG00000019018)	ENSNLEG00000003797	TMEM63B (ENSNLEG00000003801)	ENSNLEG00000003824	VEGFA (ENSNLEG00000003829)
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00390000005085
Orangutan	MODERN SPECIES	19	CD2AP (ENSPPYG00000016677)	TNFRSF21 (ENSPPYG00000016676)	ADGRF1 (ENSPPYG00000016675)	ADGRF5 (ENSPPYG00000016674)	ENSPPYG00000016673	ENSPPYG00000036594	PLA2G7 (ENSPPYG00000016672)	TDRD6 (ENSPPYG00000032219)	SLC25A27 (ENSPPYG00000016670)	CYP39A1 (ENSPPYG00000016669)	RCAN2 (ENSPPYG00000016668)	ENPP5 (ENSPPYG00000016667)	ENPP4 (ENSPPYG00000016666)	ENSPPYG00000016665	ENSPPYG00000016664 #21	SUPT3H (ENSPPYG00000016663) #22	ENSPPYG00000016662	CDC5L (ENSPPYG00000016661)	SPATS1 (ENSPPYG00000016660)	AARS2 (ENSPPYG00000016659)	TCTE1 (ENSPPYG00000016658)	TMEM151B (ENSPPYG00000016657)	ENSPPYG00000016656	SLC35B2 (ENSPPYG00000032493)	HSP90AB1 (ENSPPYG00000016655)	SLC29A1 (ENSPPYG00000016654)	MYMX (ENSPPYG00000039061)	CAPN11 (ENSPPYG00000016652)	TMEM63B (ENSPPYG00000016651)	MRPL14 (ENSPPYG00000016650)	ENSPPYG00000016649
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B.c	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00910000147751	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00910000148752
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B.c	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00910000147751	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00910000148752
Pan	ANCESTRAL SPECIES	5	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B.c	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00910000147751	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000001158	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00910000148752
Bonobo	MODERN SPECIES	19	TNFRSF21 (ENSPPAG00000029965)	ADGRF1 (ENSPPAG00000026590)	ADGRF5 (ENSPPAG00000034811)	MEP1A (ENSPPAG00000029072)	ENSPPAG00000041296	PLA2G7 (ENSPPAG00000036488)	ENSPPAG00000013878	SLC25A27 (ENSPPAG00000029296)	CYP39A1 (ENSPPAG00000037396)	ENSPPAG00000027012	RCAN2 (ENSPPAG00000028781)	ENPP5 (ENSPPAG00000032683)	ENPP4 (ENSPPAG00000032184)	ENSPPAG00000025002	RUNX2 (ENSPPAG00000036423) #21	ENSPPAG00000030879 #22	ENSPPAG00000016263	CDC5L (ENSPPAG00000031456)	SPATS1 (ENSPPAG00000007633)	AARS2 (ENSPPAG00000011981)	TCTE1 (ENSPPAG00000034916)	ENSPPAG00000041269	ENSPPAG00000028804	SLC35B2 (ENSPPAG00000027390)	ENSPPAG00000033123	SLC29A1 (ENSPPAG00000033742)	MYMX (ENSPPAG00000026302)	CAPN11 (ENSPPAG00000035892)	TMEM63B (ENSPPAG00000027102)	MRPL14 (ENSPPAG00000036858)	ENSPPAG00000041620
Chimpanzee	MODERN SPECIES	19	TNFRSF21 (ENSPTRG00000018243)	ADGRF1 (ENSPTRG00000018241)	ADGRF5 (ENSPTRG00000018240)	MEP1A (ENSPTRG00000018239)	ANKRD66 (ENSPTRG00000047101)	PLA2G7 (ENSPTRG00000018238)	TDRD6 (ENSPTRG00000018237)	SLC25A27 (ENSPTRG00000018236)	CYP39A1 (ENSPTRG00000018235)	ENSPTRG00000049833	RCAN2 (ENSPTRG00000018233)	ENPP5 (ENSPTRG00000018232)	ENPP4 (ENSPTRG00000018231)	CLIC5 (ENSPTRG00000018230)	RUNX2 (ENSPTRG00000018228) #21	SUPT3H (ENSPTRG00000023379) #22	ENSPTRG00000049163	CDC5L (ENSPTRG00000018224)	SPATS1 (ENSPTRG00000018223)	AARS2 (ENSPTRG00000018222)	TCTE1 (ENSPTRG00000018221)	TMEM151B (ENSPTRG00000018220)	NFKBIE (ENSPTRG00000018219)	SLC35B2 (ENSPTRG00000045028)	HSP90AB1 (ENSPTRG00000018217)	SLC29A1 (ENSPTRG00000018216)	MYMX (ENSPTRG00000043831)	CAPN11 (ENSPTRG00000018215)	TMEM63B (ENSPTRG00000018214)	MRPL14 (ENSPTRG00000018213)	ENSPTRG00000046423
Human	MODERN SPECIES	18	CD2AP (ENSG00000198087)	TNFRSF21 (ENSG00000146072)	ADGRF1 (ENSG00000153292)	ADGRF5 (ENSG00000069122)	MEP1A (ENSG00000112818)	ANKRD66 (ENSG00000230062)	PLA2G7 (ENSG00000146070)	TDRD6 (ENSG00000180113)	SLC25A27 (ENSG00000153291)	CYP39A1 (ENSG00000146233)	RCAN2 (ENSG00000172348)	ENPP5 (ENSG00000112796)	ENPP4 (ENSG00000001561)	CLIC5 (ENSG00000112782)	RUNX2 (ENSG00000124813) #21	SUPT3H (ENSG00000196284) #22	CDC5L (ENSG00000096401)	SPATS1 (ENSG00000249481)	AARS2 (ENSG00000124608)	TCTE1 (ENSG00000146221)	TMEM151B (ENSG00000178233)	NFKBIE (ENSG00000146232)	SLC35B2 (ENSG00000157593)	HSP90AB1 (ENSG00000096384)	SLC29A1 (ENSG00000112759)	MYMX (ENSG00000262179)	CAPN11 (ENSG00000137225)	TMEM63B (ENSG00000137216)	MRPL14 (ENSG00000180992)	VEGFA (ENSG00000112715)	MRPS18A (ENSG00000096080)
Gorilla	MODERN SPECIES	19	TNFRSF21 (ENSGGOG00000013477)	ADGRF1 (ENSGGOG00000024565)	ADGRF5 (ENSGGOG00000008246)	MEP1A (ENSGGOG00000007628)	ENSGGOG00000036391	PLA2G7 (ENSGGOG00000013436)	TDRD6 (ENSGGOG00000012971)	SLC25A27 (ENSGGOG00000012121)	CYP39A1 (ENSGGOG00000012108)	ENSGGOG00000037836	RCAN2 (ENSGGOG00000004672)	ENPP5 (ENSGGOG00000016512)	ENPP4 (ENSGGOG00000007462)	ENSGGOG00000013209	ENSGGOG00000012890 #21	SUPT3H (ENSGGOG00000014631) #22	ENSGGOG00000022252	CDC5L (ENSGGOG00000006784)	SPATS1 (ENSGGOG00000005532)	AARS (ENSGGOG00000005517)	TCTE1 (ENSGGOG00000007690)	TMEM151B (ENSGGOG00000007687)	NFKBIE (ENSGGOG00000008901)	SLC35B2 (ENSGGOG00000008896)	HSP90AB1 (ENSGGOG00000008889)	SLC29A1 (ENSGGOG00000008377)	MYMX (ENSGGOG00000022349)	CAPN11 (ENSGGOG00000003079)	TMEM63B (ENSGGOG00000003071)	MRPL14 (ENSGGOG00000006098)	ENSGGOG00000043300
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Ursidae	ANCESTRAL SPECIES	35	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Giant Panda	MODERN SPECIES	10	CD2AP (ENSAMEG00000001509)	TNFRSF21 (ENSAMEG00000001542)	ADGRF1 (ENSAMEG00000001556)	ADGRF5 (ENSAMEG00000001585)	ENSAMEG00000001613	ANKRD66 (ENSAMEG00000001650)	PLA2G7 (ENSAMEG00000001651)	TDRD6 (ENSAMEG00000001687)	SLC25A27 (ENSAMEG00000001695)	CYP39A1 (ENSAMEG00000001708)	RCAN2 (ENSAMEG00000030595)	ENPP5 (ENSAMEG00000005193)	ENPP4 (ENSAMEG00000005187)	CLIC5 (ENSAMEG00000005172)	RUNX2 (ENSAMEG00000009223) #21	SUPT3H (ENSAMEG00000011671) #22	CDC5L (ENSAMEG00000011685)	SPATS1 (ENSAMEG00000025375)	AARS2 (ENSAMEG00000011742)	TCTE1 (ENSAMEG00000011776)	NFKBIE (ENSAMEG00000011785)	SLC35B2 (ENSAMEG00000023493)	ENSAMEG00000011809	SLC29A1 (ENSAMEG00000011849)	MYMX (ENSAMEG00000019314)	CAPN11 (ENSAMEG00000011874)	TMEM63B (ENSAMEG00000012014)	MRPL14 (ENSAMEG00000012068)	VEGFA (ENSAMEG00000027031)	MRPS18A (ENSAMEG00000012117)	RSPH9 (ENSAMEG00000012125)
Ursus	ANCESTRAL SPECIES	28	ENSGT00940000162401	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00600000085213.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686
Polar bear	MODERN SPECIES	174	ENSUMAG00000004969	CD2AP (ENSUMAG00000004989)	TNFRSF21 (ENSUMAG00000005000)	ADGRF1 (ENSUMAG00000005019)	ADGRF5 (ENSUMAG00000005086)	MEP1A (ENSUMAG00000005108)	PLA2G7 (ENSUMAG00000005118)	TDRD6 (ENSUMAG00000005127)	SLC25A27 (ENSUMAG00000005150)	CYP39A1 (ENSUMAG00000005158)	RCAN2 (ENSUMAG00000005178)	ENPP5 (ENSUMAG00000005184)	ENPP4 (ENSUMAG00000005186)	CLIC5 (ENSUMAG00000005195)	ENSUMAG00000005203	SUPT3H (ENSUMAG00000005211) #22	CDC5L (ENSUMAG00000005223)	AARS2 (ENSUMAG00000005248)	NFKBIE (ENSUMAG00000005343)	HSP90AB1 (ENSUMAG00000005339)	SLC35B2 (ENSUMAG00000005353)	SLC29A1 (ENSUMAG00000005359)	MYMX (ENSUMAG00000005365)	CAPN11 (ENSUMAG00000005384)	TMEM63B (ENSUMAG00000005638)	MRPL14 (ENSUMAG00000005898)	ENSUMAG00000005907	MRPS18A (ENSUMAG00000005910)	RSPH9 (ENSUMAG00000005912)	MAD2L1BP (ENSUMAG00000005918)	ENSUMAG00000005920
Mustelinae	ANCESTRAL SPECIES	8	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
American mink	MODERN SPECIES	50			TNFRSF21 (ENSNVIG00000008680)	ADGRF1 (ENSNVIG00000008696)	ADGRF5 (ENSNVIG00000008738)	MEP1A (ENSNVIG00000008785)	PAFA (ENSNVIG00000008845)	TDRD6 (ENSNVIG00000008893)	SLC25A27 (ENSNVIG00000008919)	CP39A (ENSNVIG00000008972)	RCAN2 (ENSNVIG00000009018)	ENPP5 (ENSNVIG00000009051)	ENPP4 (ENSNVIG00000009079)	CLIC5 (ENSNVIG00000009122)	RUNX2 (ENSNVIG00000009164) #21	SUPT3H (ENSNVIG00000009185) #22	ENSNVIG00000009209	CDC5L (ENSNVIG00000009224)	ENSNVIG00000009258	ENSNVIG00000009264	ENSNVIG00000009273	SPATS1 (ENSNVIG00000009280)	AARS2 (ENSNVIG00000009313)	TCTE1 (ENSNVIG00000009393)	TMEM151B (ENSNVIG00000009412)	NFKBIE (ENSNVIG00000009421)	ENSNVIG00000009448	SLC35B2 (ENSNVIG00000009456)	SLC29A1 (ENSNVIG00000009505)	MYMX (ENSNVIG00000009592)	CAPN11 (ENSNVIG00000009603)
Ferret	MODERN SPECIES	166	ENSMPUG00000012425	ANKRD66 (ENSMPUG00000012431)	PLA2G7 (ENSMPUG00000012435)	TDRD6 (ENSMPUG00000012444)	SLC25A27 (ENSMPUG00000012447)	CYP39A1 (ENSMPUG00000012479)	ENSMPUG00000012483	ENSMPUG00000012486	ENSMPUG00000012493	ENPP5 (ENSMPUG00000012494)	ENPP4 (ENSMPUG00000012499)	ENSMPUG00000012502	CLIC5 (ENSMPUG00000012506)	ENSMPUG00000012503	RUNX2 (ENSMPUG00000012508) #21	SUPT3H (ENSMPUG00000012541) #22	CDC5L (ENSMPUG00000012546)	SPATS1 (ENSMPUG00000012557)	AARS2 (ENSMPUG00000012562)	TCTE1 (ENSMPUG00000012568)	TMEM151B (ENSMPUG00000012570)	NFKBIE (ENSMPUG00000012582)	SLC35B2 (ENSMPUG00000012591)	HSP90AB1 (ENSMPUG00000012592)	SLC29A1 (ENSMPUG00000012621)	CAPN11 (ENSMPUG00000012627)	TMEM63B (ENSMPUG00000012791)	MRPL14 (ENSMPUG00000012804)	ENSMPUG00000018840	ENSMPUG00000012812	VEGFA (ENSMPUG00000012815)
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213.a	ENSGT00950000183098.b.a.a.o.b	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000183178.a.q.b.b	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Red fox	MODERN SPECIES	7	ENSVVUG00000029310	ADGRF5 (ENSVVUG00000029307)	ENSVVUG00000029306	ANKRD66 (ENSVVUG00000029305)	PLA2G7 (ENSVVUG00000029304)	TDRD6 (ENSVVUG00000029302)	SLC25A27 (ENSVVUG00000029301)	CYP39A1 (ENSVVUG00000029293)	RCAN2 (ENSVVUG00000029288)	ENPP5 (ENSVVUG00000029287)	ENPP4 (ENSVVUG00000029286)	CLIC5 (ENSVVUG00000029276)	RUNX2 (ENSVVUG00000029252) #21	ENSVVUG00000029249	ENSVVUG00000029248	SUPT3H (ENSVVUG00000029245) #22	CDC5L (ENSVVUG00000029242)	ENSVVUG00000029240	SPATS1 (ENSVVUG00000029239)	AARS2 (ENSVVUG00000029231)	TCTE1 (ENSVVUG00000029227)	TMEM151B (ENSVVUG00000029226)	NFKBIE (ENSVVUG00000029224)	SLC35B2 (ENSVVUG00000029223)	ENSVVUG00000029141	SLC29A1 (ENSVVUG00000029123)	MYMX (ENSVVUG00000029121)	CAPN11 (ENSVVUG00000029116)	TMEM63B (ENSVVUG00000029109)	MRPL14 (ENSVVUG00000029108)	VEGFA (ENSVVUG00000029100)
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213.a	ENSGT00950000183098.b.a.a.o.b	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000183178.a.q.b.b	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Dog	MODERN SPECIES	3	ENSCAFG00845013620	ADGRF1 (ENSCAFG00845013489)	ADGRF5 (ENSCAFG00845013357)	MEP1A (ENSCAFG00845013283)	ANKRD66 (ENSCAFG00845013249)	PLA2G7 (ENSCAFG00845013082)	TDRD6 (ENSCAFG00845013034)	SLC25A27 (ENSCAFG00845012991)	CYP39A1 (ENSCAFG00845012904)	RCAN2 (ENSCAFG00845012828)	ENPP5 (ENSCAFG00845012763)	ENPP4 (ENSCAFG00845012734)	CLIC5 (ENSCAFG00845012631)	RUNX2 (ENSCAFG00845012369) #21	ENSCAFG00845012229	SUPT3H (ENSCAFG00845012174) #22	CDC5L (ENSCAFG00845011982)	ENSCAFG00845011963	SPATS1 (ENSCAFG00845011940)	AARS2 (ENSCAFG00845011820)	TCTE1 (ENSCAFG00845011779)	TMEM151B (ENSCAFG00845011741)	NFKBIE (ENSCAFG00845011706)	SLC35B2 (ENSCAFG00845011652)	ENSCAFG00845011600	SLC29A1 (ENSCAFG00845011282)	MYMX (ENSCAFG00845011194)	CAPN11 (ENSCAFG00845011002)	TMEM63B (ENSCAFG00845010814)	MRPL14 (ENSCAFG00845010714)	VEGFA (ENSCAFG00845010533)
Dingo	MODERN SPECIES	276	ENSCAFG00020012769	ADGRF1 (ENSCAFG00020012766)	ADGRF5 (ENSCAFG00020012679)	ENSCAFG00020012661	PLA2G7 (ENSCAFG00020012657)	TDRD6 (ENSCAFG00020012649)	SLC25A27 (ENSCAFG00020012644)	CYP39A1 (ENSCAFG00020012637)	RCAN2 (ENSCAFG00020012634)	ENPP5 (ENSCAFG00020012633)	ENPP4 (ENSCAFG00020012626)	CLIC5 (ENSCAFG00020012601)	RUNX2 (ENSCAFG00020012573) #21	ENSCAFG00020012568	ENSCAFG00020012564	SUPT3H (ENSCAFG00020012535) #22	CDC5L (ENSCAFG00020012353)	ENSCAFG00020012344	AARS2 (ENSCAFG00020012236)	ENSCAFG00020012228	TMEM151B (ENSCAFG00020012227)	NFKBIE (ENSCAFG00020012224)	SLC35B2 (ENSCAFG00020012221)	HSP90AB1 (ENSCAFG00020012151)	SLC29A1 (ENSCAFG00020012121)	MYMX (ENSCAFG00020012114)	ENSCAFG00020012105	ENSCAFG00020012093	TMEM63B (ENSCAFG00020012080)	MRPL14 (ENSCAFG00020012077)	VEGFA (ENSCAFG00020012066)
Felidae	ANCESTRAL SPECIES	5	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000154796.B.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213.a	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Cat	MODERN SPECIES	236	TNFRSF21 (ENSFCAG00000007357)	ADGRF1 (ENSFCAG00000009304)	ADGRF5 (ENSFCAG00000009300)	MEP1A (ENSFCAG00000009298)	ANKRD66 (ENSFCAG00000029219)	PLA2G7 (ENSFCAG00000009105)	TDRD6 (ENSFCAG00000023001)	SLC25A27 (ENSFCAG00000029625)	CYP39A1 (ENSFCAG00000011052)	RCAN2 (ENSFCAG00000027072)	ENPP5 (ENSFCAG00000024284)	ENPP4 (ENSFCAG00000033409)	CLIC5 (ENSFCAG00000037193)	ENSFCAG00000035385	RUNX2 (ENSFCAG00000041932) #21	SUPT3H (ENSFCAG00000009577) #22	CDC5L (ENSFCAG00000009570)	SPATS1 (ENSFCAG00000009776)	AARS2 (ENSFCAG00000009773)	TCTE1 (ENSFCAG00000009772)	TMEM151B (ENSFCAG00000046702)	NFKBIE (ENSFCAG00000009769)	SLC35B2 (ENSFCAG00000038971)	ENSFCAG00000009764	MYMX (ENSFCAG00000042737)	CAPN11 (ENSFCAG00000009759)	TMEM63B (ENSFCAG00000009756)	MRPL14 (ENSFCAG00000009755)	ENSFCAG00000037864	VEGFA (ENSFCAG00000026462)	MRPS18A (ENSFCAG00000036031)
Panthera	ANCESTRAL SPECIES	7	ENSGT00910000147233	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000154796.B.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213.a	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Tiger	MODERN SPECIES	220	TNFRSF21 (ENSPTIG00000000065)	ENSPTIG00000001407	ADGRF1 (ENSPTIG00000003219)	ADGRF5 (ENSPTIG00000007283)	ENSPTIG00000009534	ANKRD66 (ENSPTIG00000011262)	PLA2G7 (ENSPTIG00000011791)	TDRD6 (ENSPTIG00000013853)	SLC25A27 (ENSPTIG00000014428)	CYP39A1 (ENSPTIG00000015976)	RCAN2 (ENSPTIG00000016377)	ENPP5 (ENSPTIG00000018465)	ENPP4 (ENSPTIG00000019107)	CLIC5 (ENSPTIG00000019224)	RUNX2 (ENSPTIG00000019957) #21	SUPT3H (ENSPTIG00000002174) #22	ENSPTIG00000006405	CDC5L (ENSPTIG00000006547)	SPATS1 (ENSPTIG00000007646)	AARS2 (ENSPTIG00000009040)	ENSPTIG00000011617	TCTE1 (ENSPTIG00000011851)	NFKBIE (ENSPTIG00000013028)	SLC35B2 (ENSPTIG00000013686)	HSP90AB1 (ENSPTIG00000015152)	SLC29A1 (ENSPTIG00000017507)	MYMX (ENSPTIG00000006118)	CAPN11 (ENSPTIG00000019831)	TMEM63B (ENSPTIG00000005040)	MRPL14 (ENSPTIG00000019208)	ENSPTIG00000020469
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000154796.B.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
lion	MODERN SPECIES	5	CD2AP (ENSPLOG00000002245)	ENSPLOG00000002223	TNFRSF21 (ENSPLOG00000002189)	ADGRF1 (ENSPLOG00000002147)	ADGRF5 (ENSPLOG00000002126)	MEP1A (ENSPLOG00000002077)	PLA2G7 (ENSPLOG00000001994)	TDRD6 (ENSPLOG00000001936)	SLC25A27 (ENSPLOG00000001879)	CYP39A1 (ENSPLOG00000001836)	RCAN2 (ENSPLOG00000001804)	ENPP5 (ENSPLOG00000001784)	ENPP4 (ENSPLOG00000001771)	CLIC5 (ENSPLOG00000001669)	RUNX2 (ENSPLOG00000001488) #21	SUPT3H (ENSPLOG00000001375) #22	CDC5L (ENSPLOG00000001318)	SPATS1 (ENSPLOG00000001281)	AARS2 (ENSPLOG00000001240)	TCTE1 (ENSPLOG00000001207)	TMEM151B (ENSPLOG00000001184)	NFKBIE (ENSPLOG00000001153)	SLC35B2 (ENSPLOG00000001133)	HSP90AB1 (ENSPLOG00000001099)	SLC29A1 (ENSPLOG00000001064)	MYMX (ENSPLOG00000001047)	CAPN11 (ENSPLOG00000000991)	TMEM63B (ENSPLOG00000000941)	MRPL14 (ENSPLOG00000000912)	VEGFA (ENSPLOG00000000793)	MRPS18A (ENSPLOG00000000703)
leopard	MODERN SPECIES	30	TNFRSF21 (ENSPPRG00000005438)	ADGRF1 (ENSPPRG00000005991)	ADGRF5 (ENSPPRG00000006094)	ENSPPRG00000006807	ANKRD66 (ENSPPRG00000007018)	PLA2G7 (ENSPPRG00000007477)	TDRD6 (ENSPPRG00000007625)	SLC25A27 (ENSPPRG00000008219)	CYP39A1 (ENSPPRG00000008380)	RCAN2 (ENSPPRG00000009041)	ENPP5 (ENSPPRG00000010495)	ENPP4 (ENSPPRG00000010642)	CLIC5 (ENSPPRG00000010933)	ENSPPRG00000011377	RUNX2 (ENSPPRG00000013352) #21	SUPT3H (ENSPPRG00000014140) #22	CDC5L (ENSPPRG00000014475)	SPATS1 (ENSPPRG00000015208)	AARS2 (ENSPPRG00000016970)	TCTE1 (ENSPPRG00000018087)	TMEM151B (ENSPPRG00000018658)	NFKBIE (ENSPPRG00000019897)	SLC35B2 (ENSPPRG00000024707)	HSP90AB1 (ENSPPRG00000024108)	SLC29A1 (ENSPPRG00000023900)	MYMX (ENSPPRG00000014823)	CAPN11 (ENSPPRG00000023373)	TMEM63B (ENSPPRG00000000314)	MRPL14 (ENSPPRG00000000343)	VEGFA (ENSPPRG00000004713)	MRPS18A (ENSPPRG00000006429)
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Equus	ANCESTRAL SPECIES	10	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00600000085213	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Donkey	MODERN SPECIES	28	TNFRSF21 (ENSEASG00005003832)	ADGRF1 (ENSEASG00005003825)	ADGRF5 (ENSEASG00005003815)	MEP1A (ENSEASG00005003808)	ANKRD66 (ENSEASG00005033457)	PLA2G7 (ENSEASG00005003799)	TDRD6 (ENSEASG00005037743)	SLC25A27 (ENSEASG00005003791)	CYP39A1 (ENSEASG00005003786)	RCAN2 (ENSEASG00005003780)	ENPP5 (ENSEASG00005003777)	ENPP4 (ENSEASG00005003776)	CLIC5 (ENSEASG00005003771)	RUNX2 (ENSEASG00005003762) #21	ENSEASG00005034711	SUPT3H (ENSEASG00005003753) #22	CDC5L (ENSEASG00005003742)	SPATS1 (ENSEASG00005033049)	AARS2 (ENSEASG00005003730)	TCTE1 (ENSEASG00005036062)	TMEM151B (ENSEASG00005034440)	NFKBIE (ENSEASG00005003720)	SLC35B2 (ENSEASG00005034890)	HSP90AB1 (ENSEASG00005003711)	SLC29A1 (ENSEASG00005003698)	MYMX (ENSEASG00005036007)	CAPN11 (ENSEASG00005003548)	TMEM63B (ENSEASG00005003502)	ENSEASG00005003494	VEGFA (ENSEASG00005003487)	RSPH9 (ENSEASG00005003482)
Horse	MODERN SPECIES	12	CD2AP (ENSECAG00000018037)	TNFRSF21 (ENSECAG00000017269)	ADGRF1 (ENSECAG00000011113)	ADGRF5 (ENSECAG00000011109)	MEP1A (ENSECAG00000025147)	ANKRD66 (ENSECAG00000038904)	PLA2G7 (ENSECAG00000024899)	TDRD6 (ENSECAG00000024889)	SLC25A27 (ENSECAG00000024216)	CYP39A1 (ENSECAG00000019834)	RCAN2 (ENSECAG00000018543)	ENPP5 (ENSECAG00000012012)	ENPP4 (ENSECAG00000008799)	CLIC5 (ENSECAG00000023509)	RUNX2 (ENSECAG00000020875) #21	SUPT3H (ENSECAG00000017586) #22	CDC5L (ENSECAG00000010081)	SPATS1 (ENSECAG00000008795)	AARS2 (ENSECAG00000024012)	ENSECAG00000055383	TCTE1 (ENSECAG00000022928)	TMEM151B (ENSECAG00000000710)	NFKBIE (ENSECAG00000019914)	SLC35B2 (ENSECAG00000017860)	HSP90AB1 (ENSECAG00000008511)	SLC29A1 (ENSECAG00000008083)	CAPN11 (ENSECAG00000000758)	TMEM63B (ENSECAG00000013055)	MRPL14 (ENSECAG00000012726)	VEGFA (ENSECAG00000009402)	RSPH9 (ENSECAG00000000696)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Greater horseshoe bat	MODERN SPECIES	21	CD2AP (ENSRFEG00010007582)	ENSRFEG00010007560	TNFRSF21 (ENSRFEG00010007527)	ADGRF1 (ENSRFEG00010007463)	ADGRF5 (ENSRFEG00010007324)	ENSRFEG00010007171	PLA2G7 (ENSRFEG00010007125)	TDRD6 (ENSRFEG00010007049)	SLC25A27 (ENSRFEG00010006968)	CYP39A1 (ENSRFEG00010006864)	RCAN2 (ENSRFEG00010006786)	ENPP5 (ENSRFEG00010006712)	ENPP4 (ENSRFEG00010006685)	CLIC5 (ENSRFEG00010006585)	RUNX2 (ENSRFEG00010006335) #21	SUPT3H (ENSRFEG00010006235) #22	CDC5L (ENSRFEG00010006193)	SPATS1 (ENSRFEG00010006160)	AARS2 (ENSRFEG00010006015)	TCTE1 (ENSRFEG00010005907)	TMEM151B (ENSRFEG00010005887)	NFKBIE (ENSRFEG00010005871)	SLC35B2 (ENSRFEG00010005829)	ENSRFEG00010005791	SLC29A1 (ENSRFEG00010005739)	MYMX (ENSRFEG00010005710)	CAPN11 (ENSRFEG00010005643)	TMEM63B (ENSRFEG00010005508)	MRPL14 (ENSRFEG00010005426)	ENSRFEG00010005409	VEGFA (ENSRFEG00010005317)
Microbat	MODERN SPECIES	1178											ENSMLUG00000015296	ENSMLUG00000025818	ENPP4 (ENSMLUG00000017693)	CLIC5 (ENSMLUG00000013183)	RUNX2 (ENSMLUG00000000514) #21	SUPT3H (ENSMLUG00000016339) #22	CDC5L (ENSMLUG00000012803)	AARS2 (ENSMLUG00000005280)	TCTE1 (ENSMLUG00000005273)	ENSMLUG00000005268	NFKBIE (ENSMLUG00000005257)	SLC35B2 (ENSMLUG00000005249)	HSP90AB1 (ENSMLUG00000005239)	SLC29A1 (ENSMLUG00000005230)	ENSMLUG00000029857	MYMX (ENSMLUG00000025753)	CAPN11 (ENSMLUG00000005209)	TMEM63B (ENSMLUG00000005186)	MRPL14 (ENSMLUG00000024245)
Megabat	MODERN SPECIES	3008															RUNX2 (ENSPVAG00000001720) #21	SUPT3H (ENSPVAG00000001719) #22
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Suina	ANCESTRAL SPECIES	17	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Chacoan peccary	MODERN SPECIES	781	ADGRF4 (ENSCWAG00000011149)	ENSCWAG00000011326	CD2AP (ENSCWAG00000011437)	TNFRSF21 (ENSCWAG00000011489)	ADGRF1 (ENSCWAG00000011609)	ADGRF5 (ENSCWAG00000011839)	PLA2G7 (ENSCWAG00000012088)	TDRD6 (ENSCWAG00000012197)	SLC25A27 (ENSCWAG00000012280)	CYP39A1 (ENSCWAG00000012377)	RCAN2 (ENSCWAG00000012552)	ENPP5 (ENSCWAG00000012637)	ENPP4 (ENSCWAG00000012673)	CLIC5 (ENSCWAG00000012739)	RUNX2 (ENSCWAG00000012986) #21	SUPT3H (ENSCWAG00000013262) #22	CDC5L (ENSCWAG00000013381)	SPATS1 (ENSCWAG00000013504)	AARS2 (ENSCWAG00000013610)	TMEM151B (ENSCWAG00000013797)	TCTE1 (ENSCWAG00000013906)	NFKBIE (ENSCWAG00000013940)	SLC35B2 (ENSCWAG00000013979)	HSP90AB1 (ENSCWAG00000014052)	SLC29A1 (ENSCWAG00000014160)	MYMX (ENSCWAG00000014424)	CAPN11 (ENSCWAG00000014460)	TMEM63B (ENSCWAG00000014863)	MRPL14 (ENSCWAG00000014930)	VEGFA (ENSCWAG00000015280)	MRPS18A (ENSCWAG00000015571)
Pig	MODERN SPECIES	15	TNFRSF21 (ENSSSCG00000001727)	ADGRF1 (ENSSSCG00000001726)	ADGRF5 (ENSSSCG00000001725)	ENSSSCG00000001724	ANKRD66 (ENSSSCG00000032691)	PLA2G7 (ENSSSCG00000001723)	TDRD6 (ENSSSCG00000021218)	SLC25A27 (ENSSSCG00000001720)	CYP39A1 (ENSSSCG00000001718)	ENSSSCG00000046246	RCAN2 (ENSSSCG00000001716)	ENPP5 (ENSSSCG00000001715)	ENPP4 (ENSSSCG00000025788)	CLIC5 (ENSSSCG00000037416)	RUNX2 (ENSSSCG00000001710) #21	SUPT3H (ENSSSCG00000001709) #22	CDC5L (ENSSSCG00000001708)	SPATS1 (ENSSSCG00000039903)	AARS2 (ENSSSCG00000001706)	TCTE1 (ENSSSCG00000001705)	TMEM151B (ENSSSCG00000040047)	NFKBIE (ENSSSCG00000001703)	SLC35B2 (ENSSSCG00000001702)	HSP90AB1 (ENSSSCG00000001701)	SLC29A1 (ENSSSCG00000001700)	MYMX (ENSSSCG00000053910)	CAPN11 (ENSSSCG00000001698)	TMEM63B (ENSSSCG00000001697)	ENSSSCG00000001696	VEGFA (ENSSSCG00000001695)	MRPS18A (ENSSSCG00000001692)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Arabian camel	MODERN SPECIES	12	ADGRF1 (ENSCDRG00005017958)	ADGRF5 (ENSCDRG00005017711)	MEP1A (ENSCDRG00005017623)	ANKRD66 (ENSCDRG00005017611)	PLA2G7 (ENSCDRG00005017578)	TDRD6 (ENSCDRG00005017551)	SLC25A27 (ENSCDRG00005017477)	CYP39A1 (ENSCDRG00005017415)	RCAN2 (ENSCDRG00005017371)	ENPP5 (ENSCDRG00005017349)	ENPP4 (ENSCDRG00005017329)	CLIC5 (ENSCDRG00005017124)	ENSCDRG00005017081	RUNX2 (ENSCDRG00005016851) #21	ENSCDRG00005016813	SUPT3H (ENSCDRG00005016695) #22	CDC5L (ENSCDRG00005016628)	SPATS1 (ENSCDRG00005016556)	AARS2 (ENSCDRG00005016509)	TCTE1 (ENSCDRG00005016461)	TMEM151B (ENSCDRG00005016345)	NFKBIE (ENSCDRG00005016296)	SLC35B2 (ENSCDRG00005016257)	HSP90AB1 (ENSCDRG00005016031)	SLC29A1 (ENSCDRG00005015969)	MYMX (ENSCDRG00005015949)	CAPN11 (ENSCDRG00005015801)	TMEM63B (ENSCDRG00005015620)	ENSCDRG00005015582	VEGFA (ENSCDRG00005015143)	MRPS18A (ENSCDRG00005015039)
Alpaca	MODERN SPECIES	2581	OPN5 (ENSVPAG00000003637)	ADGRF4 (ENSVPAG00000003636)	ENSVPAG00000003635	CD2AP (ENSVPAG00000003634)	TNFRSF21 (ENSVPAG00000003632)	ENSVPAG00000003631	ENSVPAG00000003630	ENSVPAG00000003629	PLA2G7 (ENSVPAG00000003627)	ENSVPAG00000003625	CYP39A1 (ENSVPAG00000003621)	RCAN2 (ENSVPAG00000003619)	ENPP5 (ENSVPAG00000003618)	ENSVPAG00000003617	RUNX2 (ENSVPAG00000003613) #21	SUPT3H (ENSVPAG00000003611) #22
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	30	TNFRSF21 (ENSCHYG00000004188)	ADGRF1 (ENSCHYG00000004148)	ADGRF5 (ENSCHYG00000004088)	ENSCHYG00000004047	ANKRD66 (ENSCHYG00000004034)	PLA2G7 (ENSCHYG00000004014)	TDRD6 (ENSCHYG00000003999)	SLC25A27 (ENSCHYG00000003980)	CYP39A1 (ENSCHYG00000003915)	RCAN2 (ENSCHYG00000003892)	ENPP5 (ENSCHYG00000003860)	ENPP4 (ENSCHYG00000003848)	CLIC5 (ENSCHYG00000003742)	ENSCHYG00000003693	RUNX2 (ENSCHYG00000003599) #21	ENSCHYG00000003525 #22	CDC5L (ENSCHYG00000003502)	ENSCHYG00000003485	SPATS1 (ENSCHYG00000003434)	AARS2 (ENSCHYG00000003393)	TCTE1 (ENSCHYG00000003376)	TMEM151B (ENSCHYG00000003360)	NFKBIE (ENSCHYG00000003350)	SLC35B2 (ENSCHYG00000003323)	ENSCHYG00000003288	SLC29A1 (ENSCHYG00000003261)	MYMX (ENSCHYG00000003237)	CAPN11 (ENSCHYG00000003195)	TMEM63B (ENSCHYG00000003109)	MRPL14 (ENSCHYG00000003077)	ENSCHYG00000003034
Yarkand deer	MODERN SPECIES	1323	RAB33A (ENSCHYG00000009255)	AIFM1 (ENSCHYG00000008742)	ELF4 (ENSCHYG00000026023)	BCORL1 (ENSCHYG00000025970)	ENSCHYG00000025857	ENSCHYG00000025840	ZDHHC9 (ENSCHYG00000025817)	SASH3 (ENSCHYG00000025793)	XPNPEP2 (ENSCHYG00000025693)	APLN (ENSCHYG00000025668)	OCRL (ENSCHYG00000025407)	SMARCA1 (ENSCHYG00000025080)	ENSCHYG00000025048	ACTRT1 (ENSCHYG00000025034)	ENSCHYG00000025024	ENSCHYG00000025010 #22	PRR32 (ENSCHYG00000024997)	DCAF12L1 (ENSCHYG00000024989)	DCAF12L2 (ENSCHYG00000024968)	ENSCHYG00000024954	TENM1 (ENSCHYG00000018239)	SH2D1A (ENSCHYG00000017656)	STAG2 (ENSCHYG00000016931)	XIAP (ENSCHYG00000016805)	ENSCHYG00000016724	ENSCHYG00000016068	GRIA3 (ENSCHYG00000015734)	ENSCHYG00000015665	ENSCHYG00000015647	MCTS1 (ENSCHYG00000015357)	CUL4B (ENSCHYG00000014824)
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Siberian musk deer	MODERN SPECIES	355	CD2AP (ENSMMSG00000009800)	TNFRSF21 (ENSMMSG00000009769)	ADGRF1 (ENSMMSG00000009673)	ADGRF5 (ENSMMSG00000009469)	MEP1A (ENSMMSG00000009302)	PLA2G7 (ENSMMSG00000009246)	TDRD6 (ENSMMSG00000009162)	SLC25A27 (ENSMMSG00000009095)	CYP39A1 (ENSMMSG00000009016)	RCAN2 (ENSMMSG00000008959)	ENPP5 (ENSMMSG00000008932)	ENPP4 (ENSMMSG00000008907)	CLIC5 (ENSMMSG00000008775)	ENSMMSG00000008737	RUNX2 (ENSMMSG00000008596) #21	SUPT3H (ENSMMSG00000008424) #22	CDC5L (ENSMMSG00000008352)	SPATS1 (ENSMMSG00000008299)	AARS2 (ENSMMSG00000008187)	TCTE1 (ENSMMSG00000008158)	TMEM151B (ENSMMSG00000008119)	NFKBIE (ENSMMSG00000008087)	SLC35B2 (ENSMMSG00000008039)	ENSMMSG00000007967	SLC29A1 (ENSMMSG00000007929)	MYMX (ENSMMSG00000007910)	CAPN11 (ENSMMSG00000007786)	TMEM63B (ENSMMSG00000007690)	MRPL14 (ENSMMSG00000007639)	VEGFA (ENSMMSG00000007348)	MRPS18A (ENSMMSG00000007259)
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Rambouillet Sheep	MODERN SPECIES	12	MMUT (ENSOARG00020014615)	ENSOARG00020014483	PTCHD4 (ENSOARG00020014419)	OPN5 (ENSOARG00020014292)	CD2AP (ENSOARG00020013919)	TNFRSF21 (ENSOARG00020013800)	ENSOARG00020013269	PLA2G7 (ENSOARG00020013182)	SLC25A27 (ENSOARG00020012919)	CYP39A1 (ENSOARG00020012671)	RCAN2 (ENSOARG00020012469)	ENPP5 (ENSOARG00020012428)	ENPP4 (ENSOARG00020012373)	CLIC5 (ENSOARG00020011684)	RUNX2 (ENSOARG00020024751) #21	SUPT3H (ENSOARG00020024651) #22	CDC5L (ENSOARG00020024617)	AARS2 (ENSOARG00020024543)	TCTE1 (ENSOARG00020024516)	TMEM151B (ENSOARG00020024483)	NFKBIE (ENSOARG00020024469)	SLC35B2 (ENSOARG00020024444)	HSP90AB1 (ENSOARG00020024426)	SLC29A1 (ENSOARG00020024417)	MYMX (ENSOARG00020024406)	CAPN11 (ENSOARG00020024352)	TMEM63B (ENSOARG00020024328)	MRPL14 (ENSOARG00020024309)	VEGFA (ENSOARG00020022857)	ENSOARG00020022732	MRPS18A (ENSOARG00020022680)
Goat	MODERN SPECIES	15	CD2AP (ENSCHIG00000025885)	TNFRSF21 (ENSCHIG00000026271)	ADGRF1 (ENSCHIG00000024674)	ADGRF5 (ENSCHIG00000008724)	MEP1A (ENSCHIG00000018716)	ANKRD66 (ENSCHIG00000023000)	PLA2G7 (ENSCHIG00000014030)	TDRD6 (ENSCHIG00000012400)	SLC25A27 (ENSCHIG00000021609)	CYP39A1 (ENSCHIG00000011070)	RCAN2 (ENSCHIG00000018360)	ENPP5 (ENSCHIG00000018749)	ENPP4 (ENSCHIG00000012993)	CLIC5 (ENSCHIG00000014360)	RUNX2 (ENSCHIG00000016080) #21	SUPT3H (ENSCHIG00000016615) #22	CDC5L (ENSCHIG00000022031)	SPATS1 (ENSCHIG00000010115)	AARS2 (ENSCHIG00000018888)	TCTE1 (ENSCHIG00000011244)	TMEM151B (ENSCHIG00000023296)	SLC35B2 (ENSCHIG00000018057)	ENSCHIG00000017807	SLC29A1 (ENSCHIG00000022410)	CAPN11 (ENSCHIG00000010362)	ENSCHIG00000017964	TMEM63B (ENSCHIG00000010295)	MRPL14 (ENSCHIG00000016433)	VEGFA (ENSCHIG00000009242)	MRPS18A (ENSCHIG00000013039)	ENSCHIG00000006683
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
American bison	MODERN SPECIES	3345	ENSBBBG00000019757	CD2AP (ENSBBBG00000006860)	TNFRSF21 (ENSBBBG00000007515)	ADGRF1 (ENSBBBG00000019694)	ADGRF5 (ENSBBBG00000019678)	MEP1A (ENSBBBG00000005331)	PLA2G7 (ENSBBBG00000019618)	TDRD6 (ENSBBBG00000008306)	SLC25A27 (ENSBBBG00000019573)	CYP39A1 (ENSBBBG00000019554)	RCAN2 (ENSBBBG00000019534)	ENPP5 (ENSBBBG00000019507)	ENPP4 (ENSBBBG00000005264)	CLIC5 (ENSBBBG00000005260)	RUNX2 (ENSBBBG00000005249) #21	SUPT3H (ENSBBBG00000019372) #22	CDC5L (ENSBBBG00000008519)	SPATS1 (ENSBBBG00000019339)	AARS2 (ENSBBBG00000005050)	TCTE1 (ENSBBBG00000005019)	TMEM151B (ENSBBBG00000019315)	NFKBIE (ENSBBBG00000005007)	SLC35B2 (ENSBBBG00000005002)	ENSBBBG00000009167	SLC29A1 (ENSBBBG00000019250)	MYMX (ENSBBBG00000019201)	CAPN11 (ENSBBBG00000004944)	ENSBBBG00000019176	TMEM63B (ENSBBBG00000019165)	MRPL14 (ENSBBBG00000019131)	VEGFA (ENSBBBG00000004895)
Bos	ANCESTRAL SPECIES	17	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00900000141083.d.b	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Wild yak	MODERN SPECIES	1156														CLIC5 (ENSBMUG00000011072)	ENSBMUG00000011236 #21	SUPT3H (ENSBMUG00000011389) #22	CDC5L (ENSBMUG00000011426)	SPATS1 (ENSBMUG00000011457)	AARS2 (ENSBMUG00000011497)	TMEM151B (ENSBMUG00000011556)	TCTE1 (ENSBMUG00000011580)	NFKBIE (ENSBMUG00000011601)	SLC35B2 (ENSBMUG00000011640)	ENSBMUG00000011676	SLC29A1 (ENSBMUG00000011739)	MYMX (ENSBMUG00000011878)	CAPN11 (ENSBMUG00000011894)	ENSBMUG00000011908	TMEM63B (ENSBMUG00000011927)	MRPL14 (ENSBMUG00000011949)	ENSBMUG00000011996
Domestic yak	MODERN SPECIES	16	ENSBGRG00000024786	ADGRF5 (ENSBGRG00000024816)	MEP1A (ENSBGRG00000024947)	ANKRD66 (ENSBGRG00000024998)	PLA2G7 (ENSBGRG00000025010)	TDRD6 (ENSBGRG00000025033)	SLC25A27 (ENSBGRG00000025100)	CYP39A1 (ENSBGRG00000025184)	RCAN2 (ENSBGRG00000025293)	ENSBGRG00000025310	ENSBGRG00000025324	ENPP5 (ENSBGRG00000025336)	ENPP4 (ENSBGRG00000025340)	CLIC5 (ENSBGRG00000025358)	RUNX2 (ENSBGRG00000025453) #21	SUPT3H (ENSBGRG00000025521) #22	CDC5L (ENSBGRG00000025587)	SPATS1 (ENSBGRG00000025671)	AARS2 (ENSBGRG00000025693)	TMEM151B (ENSBGRG00000006948)	TCTE1 (ENSBGRG00000007036)	ENSBGRG00000007091	NFKBIE (ENSBGRG00000007378)	SLC35B2 (ENSBGRG00000007502)	SLC29A1 (ENSBGRG00000007719)	MYMX (ENSBGRG00000008830)	ENSBGRG00000008841	TMEM63B (ENSBGRG00000008917)	ENSBGRG00000009756	ENSBGRG00000009813	VEGFA (ENSBGRG00000010227)
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000165752	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Cow	MODERN SPECIES	15	CD2AP (ENSBTAG00000000322)	TNFRSF21 (ENSBTAG00000020054)	ADGRF1 (ENSBTAG00000021609)	ADGRF5 (ENSBTAG00000004347)	MEP1A (ENSBTAG00000004345)	ANKRD66 (ENSBTAG00000047009)	PLA2G7 (ENSBTAG00000019315)	TDRD6 (ENSBTAG00000009978)	SLC25A27 (ENSBTAG00000016302)	CYP39A1 (ENSBTAG00000003632)	RCAN2 (ENSBTAG00000009302)	ENPP5 (ENSBTAG00000015829)	ENPP4 (ENSBTAG00000003499)	CLIC5 (ENSBTAG00000010244)	RUNX2 (ENSBTAG00000004104) #21	SUPT3H (ENSBTAG00000032887) #22	CDC5L (ENSBTAG00000020012)	SPATS1 (ENSBTAG00000053813)	AARS2 (ENSBTAG00000013722)	ENSBTAG00000050049	TMEM151B (ENSBTAG00000050799)	NFKBIE (ENSBTAG00000013705)	SLC35B2 (ENSBTAG00000008076)	HSP90AB1 (ENSBTAG00000000778)	SLC29A1 (ENSBTAG00000015131)	MYMX (ENSBTAG00000049369)	ENSBTAG00000053551	ENSBTAG00000050117	CAPN11 (ENSBTAG00000021066)	TMEM63B (ENSBTAG00000032680)	ENSBTAG00000050249
Hybrid Bos Indicus	MODERN SPECIES	15	TNFRSF21 (ENSBIXG00005004727)	ADGRF1 (ENSBIXG00005027562)	ADGRF5 (ENSBIXG00005027719)	ENSBIXG00005027818	ANKRD66 (ENSBIXG00005004789)	PLA2G7 (ENSBIXG00005027887)	TDRD6 (ENSBIXG00005027935)	SLC25A27 (ENSBIXG00005004811)	CYP39A1 (ENSBIXG00005028098)	ENSBIXG00005028148	RCAN2 (ENSBIXG00005028228)	ENPP5 (ENSBIXG00005028257)	ENPP4 (ENSBIXG00005004865)	CLIC5 (ENSBIXG00005004883)	RUNX2 (ENSBIXG00005028546) #21	SUPT3H (ENSBIXG00005002363) #22	CDC5L (ENSBIXG00005028783)	SPATS1 (ENSBIXG00005005004)	AARS2 (ENSBIXG00005002270)	TCTE1 (ENSBIXG00005028882)	TMEM151B (ENSBIXG00005005053)	SLC35B2 (ENSBIXG00005028950)	ENSBIXG00005005101	SLC29A1 (ENSBIXG00005029077)	MYMX (ENSBIXG00005029092)	ENSBIXG00005001907	TMEM63B (ENSBIXG00005029176)	ENSBIXG00005029198	VEGFA (ENSBIXG00005029350)	MRPS18A (ENSBIXG00005029321)	RSPH9 (ENSBIXG00005029313)
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493
Vaquita	MODERN SPECIES	2	OPN5 (ENSPSNG00000009417)	CD2AP (ENSPSNG00000009294)	TNFRSF21 (ENSPSNG00000009140)	ADGRF1 (ENSPSNG00000009011)	ADGRF5 (ENSPSNG00000008857)	MEP1A (ENSPSNG00000008755)	PLA2G7 (ENSPSNG00000008681)	TDRD6 (ENSPSNG00000008632)	SLC25A27 (ENSPSNG00000008574)	CYP39A1 (ENSPSNG00000022222)	RCAN2 (ENSPSNG00000022200)	ENPP5 (ENSPSNG00000022178)	ENPP4 (ENSPSNG00000022167)	CLIC5 (ENSPSNG00000022150)	RUNX2 (ENSPSNG00000022079) #21	SUPT3H (ENSPSNG00000021986) #22	CDC5L (ENSPSNG00000021910)	SPATS1 (ENSPSNG00000021877)	AARS2 (ENSPSNG00000021807)	TCTE1 (ENSPSNG00000021756)	TMEM151B (ENSPSNG00000021731)	NFKBIE (ENSPSNG00000021715)	SLC35B2 (ENSPSNG00000021691)	ENSPSNG00000021648	SLC29A1 (ENSPSNG00000021618)	MYMX (ENSPSNG00000021603)	CAPN11 (ENSPSNG00000021548)	TMEM63B (ENSPSNG00000021472)	MRPL14 (ENSPSNG00000021435)	VEGFA (ENSPSNG00000021211)	MRPS18A (ENSPSNG00000021141)
Monodontidae	ANCESTRAL SPECIES	4	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00940000164139	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00390000010779.a.a.a.a.a.b	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Beluga whale	MODERN SPECIES	8	OPN5 (ENSDLEG00000001084)	CD2AP (ENSDLEG00000001041)	TNFRSF21 (ENSDLEG00000001016)	ADGRF1 (ENSDLEG00000000980)	ADGRF5 (ENSDLEG00000000904)	MEP1A (ENSDLEG00000000867)	PLA2G7 (ENSDLEG00000000800)	TDRD6 (ENSDLEG00000000770)	SLC25A27 (ENSDLEG00000000756)	CYP39A1 (ENSDLEG00000000731)	RCAN2 (ENSDLEG00000000717)	ENPP5 (ENSDLEG00000000700)	ENPP4 (ENSDLEG00000000685)	CLIC5 (ENSDLEG00000000664)	RUNX2 (ENSDLEG00000000630) #21	SUPT3H (ENSDLEG00000000591) #22	ENSDLEG00000000570	CDC5L (ENSDLEG00000000545)	SPATS1 (ENSDLEG00000000518)	AARS2 (ENSDLEG00000000444)	TCTE1 (ENSDLEG00000000424)	TMEM151B (ENSDLEG00000000408)	NFKBIE (ENSDLEG00000000394)	SLC35B2 (ENSDLEG00000000374)	HSP90AB1 (ENSDLEG00000000345)	SLC29A1 (ENSDLEG00000000310)	MYMX (ENSDLEG00000000300)	CAPN11 (ENSDLEG00000000227)	TMEM63B (ENSDLEG00000000075)	MRPL14 (ENSDLEG00000014995)	VEGFA (ENSDLEG00000014948)
Narwhal	MODERN SPECIES	310	OPN5 (ENSMMNG00015016991)	CD2AP (ENSMMNG00015017073)	TNFRSF21 (ENSMMNG00015017118)	ADGRF1 (ENSMMNG00015017176)	ADGRF5 (ENSMMNG00015017259)	MEP1A (ENSMMNG00015017295)	PLA2G7 (ENSMMNG00015017360)	TDRD6 (ENSMMNG00015017411)	SLC25A27 (ENSMMNG00015017464)	CYP39A1 (ENSMMNG00015017512)	RCAN2 (ENSMMNG00015017593)	ENPP5 (ENSMMNG00015017627)	ENPP4 (ENSMMNG00015017642)	CLIC5 (ENSMMNG00015017682)	RUNX2 (ENSMMNG00015017775) #21	SUPT3H (ENSMMNG00015017962) #22	ENSMMNG00015018032	CDC5L (ENSMMNG00015018065)	SPATS1 (ENSMMNG00015018108)	AARS (ENSMMNG00015018169)	TMEM151B (ENSMMNG00015009694)	TCTE1 (ENSMMNG00015009711)	NFKBIE (ENSMMNG00015009718)	SLC35B2 (ENSMMNG00015009735)	ENSMMNG00015009748	SLC29A1 (ENSMMNG00015009769)	MYMX (ENSMMNG00015009791)	CAPN11 (ENSMMNG00015009805)	TMEM63B (ENSMMNG00015009841)	MRPL14 (ENSMMNG00015009865)	VEGFA (ENSMMNG00015009915)
Dolphin	MODERN SPECIES	537															RUNX2 (ENSTTRG00000006943) #21	SUPT3H (ENSTTRG00000006941) #22	CDC5L (ENSTTRG00000006940)	SPATS1 (ENSTTRG00000006939)	AARS2 (ENSTTRG00000006938)	TCTE1 (ENSTTRG00000006936)	ENSTTRG00000006933	ENSTTRG00000006928	SLC35B2 (ENSTTRG00000006927)	ENSTTRG00000006924	SLC29A1 (ENSTTRG00000006921)	CAPN11 (ENSTTRG00000006905)
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	15	ENSPCTG00005013401	BEND5 (ENSPCTG00005013421)	AGBL4 (ENSPCTG00005013528)	SPATA6 (ENSPCTG00005013649)	SLC5A9 (ENSPCTG00005013780)	ENSPCTG00005014378	ENSPCTG00005014432	FOXE3 (ENSPCTG00005014461)	CMPK1 (ENSPCTG00005014484)	STIL (ENSPCTG00005014632)	TAL1 (ENSPCTG00005014754)	PDZK1IP1 (ENSPCTG00005014810)	ENSPCTG00005014892	ENSPCTG00005015607	CYP4B1 (ENSPCTG00005016063)	ENSPCTG00005016599 #22	ENSPCTG00005016621	EFCAB14 (ENSPCTG00005016666)	TEX38 (ENSPCTG00005016811)	ATPAF1 (ENSPCTG00005016892)	MKNK1 (ENSPCTG00005017143)	KNCN (ENSPCTG00005017520)	ENSPCTG00005017654	LRRC41 (ENSPCTG00005017698)	RAD54L (ENSPCTG00005017790)	LURAP1 (ENSPCTG00005017847)	POMGNT1 (ENSPCTG00005017887)	TSPAN1 (ENSPCTG00005018018)	P3R3URF (ENSPCTG00005018046)	PIK3R3 (ENSPCTG00005018079)	IPP (ENSPCTG00005018178)
Sperm whale	MODERN SPECIES	9	ENSPCTG00005008935	TNFRSF21 (ENSPCTG00005008890)	ENSPCTG00005008782	ADGRF5 (ENSPCTG00005008611)	MEP1A (ENSPCTG00005008503)	ANKRD66 (ENSPCTG00005008469)	PLA2G7 (ENSPCTG00005008418)	TDRD6 (ENSPCTG00005008350)	SLC25A27 (ENSPCTG00005008287)	CYP39A1 (ENSPCTG00005008193)	RCAN2 (ENSPCTG00005008155)	ENPP5 (ENSPCTG00005008135)	ENPP4 (ENSPCTG00005008121)	CLIC5 (ENSPCTG00005007981)	RUNX2 (ENSPCTG00005007544) #21	ENSPCTG00005007412 #22	ENSPCTG00005007377	CDC5L (ENSPCTG00005007303)	SPATS1 (ENSPCTG00005007248)	AARS2 (ENSPCTG00005007205)	TCTE1 (ENSPCTG00005007160)	TMEM151B (ENSPCTG00005007137)	NFKBIE (ENSPCTG00005007101)	SLC35B2 (ENSPCTG00005007062)	HSP90AB1 (ENSPCTG00005006982)	SLC29A1 (ENSPCTG00005006893)	MYMX (ENSPCTG00005006866)	CAPN11 (ENSPCTG00005006782)	TMEM63B (ENSPCTG00005006648)	MRPS18A (ENSPCTG00005006454)	RSPH9 (ENSPCTG00005006413)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	2	CD2AP (ENSBMSG00010017409)	TNFRSF21 (ENSBMSG00010017498)	ADGRF1 (ENSBMSG00010017536)	ADGRF5 (ENSBMSG00010017606)	MEP1A (ENSBMSG00010017705)	ANKRD66 (ENSBMSG00010017774)	PLA2G7 (ENSBMSG00010017805)	TDRD6 (ENSBMSG00010017877)	SLC25A27 (ENSBMSG00010017922)	CYP39A1 (ENSBMSG00010017997)	RCAN2 (ENSBMSG00010018036)	ENPP5 (ENSBMSG00010018080)	ENPP4 (ENSBMSG00010018102)	CLIC5 (ENSBMSG00010018136)	RUNX2 (ENSBMSG00010018282) #21	ENSBMSG00010018551 #22	CDC5L (ENSBMSG00010018609)	AARS2 (ENSBMSG00010018678)	TMEM151B (ENSBMSG00010018747)	ENSBMSG00010018779	NFKBIE (ENSBMSG00010018796)	SLC35B2 (ENSBMSG00010018830)	ENSBMSG00010018890	SLC29A1 (ENSBMSG00010018936)	MYMX (ENSBMSG00010018956)	CAPN11 (ENSBMSG00010019043)	TMEM63B (ENSBMSG00010019402)	MRPL14 (ENSBMSG00010019442)	VEGFA (ENSBMSG00010019559)	MRPS18A (ENSBMSG00010020183)	RSPH9 (ENSBMSG00010020198)
Blue whale	MODERN SPECIES		BEND5 (ENSBMSG00010005413)	AGBL4 (ENSBMSG00010005358)	SPATA6 (ENSBMSG00010005335)	SLC5A9 (ENSBMSG00010005258)	TRABD2B (ENSBMSG00010005224)	ENSBMSG00010005215	FOXE3 (ENSBMSG00010005194)	CMPK1 (ENSBMSG00010005177)	STIL (ENSBMSG00010005150)	TAL1 (ENSBMSG00010005132)	PDZK1IP1 (ENSBMSG00010005121)	ENSBMSG00010005054	ENSBMSG00010005028	ENSBMSG00010005002	ENSBMSG00010004944	ENSBMSG00010004923 #22	ENSBMSG00010004918	EFCAB14 (ENSBMSG00010004906)	TEX38 (ENSBMSG00010004896)	ATPAF1 (ENSBMSG00010004876)	MOB3C (ENSBMSG00010004861)	MKNK1 (ENSBMSG00010004836)	KNCN (ENSBMSG00010004806)	DMBX1 (ENSBMSG00010004794)	FAAH (ENSBMSG00010004779)	NSUN4 (ENSBMSG00010004759)	ENSBMSG00010004751	LRRC41 (ENSBMSG00010004731)	RAD54L (ENSBMSG00010004725)	LURAP1 (ENSBMSG00010004712)	POMGNT1 (ENSBMSG00010004690)
Eulipotyphla	ANCESTRAL SPECIES	1028															ENSGT00940000160171 #21	ENSGT00390000010738 #22
Common shrew	MODERN SPECIES	6347															RUNX2 (ENSSARG00000001376) #21	ENSSARG00000001368 #22
Hedgehog	MODERN SPECIES	8071															RUNX2 (ENSEEUG00000009243) #21	ENSEEUG00000009119 #22
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Afrotheria	ANCESTRAL SPECIES	24	ENSGT00940000162401	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Afrotheria_a	ANCESTRAL SPECIES	23	ENSGT00940000162401	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00500000045766	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00950000182898.a.a.a.a.b	ENSGT00490000044373	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284
Elephant	MODERN SPECIES	1	CD2AP (ENSLAFG00000001252)	ENSLAFG00000018483	TNFRSF21 (ENSLAFG00000015950)	ADGRF1 (ENSLAFG00000009709)	ADGRF5 (ENSLAFG00000009311)	ENSLAFG00000009308	PLA2G7 (ENSLAFG00000016585)	TDRD6 (ENSLAFG00000025617)	SLC25A27 (ENSLAFG00000031036)	CYP39A1 (ENSLAFG00000001972)	RCAN2 (ENSLAFG00000012868)	ENPP5 (ENSLAFG00000001861)	ENPP4 (ENSLAFG00000001859)	CLIC5 (ENSLAFG00000001856)	RUNX2 (ENSLAFG00000005054) #21	SUPT3H (ENSLAFG00000005048) #22	CDC5L (ENSLAFG00000012689)	SPATS1 (ENSLAFG00000012684)	AARS2 (ENSLAFG00000014270)	TCTE1 (ENSLAFG00000014269)	TMEM151B (ENSLAFG00000014262)	NFKBIE (ENSLAFG00000028259)	SLC35B2 (ENSLAFG00000005151)	HSP90AB1 (ENSLAFG00000028485)	SLC29A1 (ENSLAFG00000010303)	MYMX (ENSLAFG00000027922)	ENSLAFG00000028863	ENSLAFG00000027870	TMEM63B (ENSLAFG00000015940)	MRPL14 (ENSLAFG00000015932)	VEGFA (ENSLAFG00000032226)
Hyrax	MODERN SPECIES	6736															RUNX2 (ENSPCAG00000005288) #21	SUPT3H (ENSPCAG00000005181) #22
Tenrec	MODERN SPECIES	7990															RUNX2 (ENSETEG00000004708) #21	SUPT3H (ENSETEG00000004704) #22
Xenarthra	ANCESTRAL SPECIES	187						ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00740000116630	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927
Sloth	MODERN SPECIES	7126																SUPT3H (ENSCHOG00000008163) #22
Armadillo	MODERN SPECIES	1131					PLA2G7 (ENSDNOG00000007266)	TDRD6 (ENSDNOG00000042799)	SLC25A27 (ENSDNOG00000031078)	CYP39A1 (ENSDNOG00000006312)	ENSDNOG00000012767	ENSDNOG00000043306	ENPP5 (ENSDNOG00000033683)	ENPP4 (ENSDNOG00000023694)	ENSDNOG00000005596	CLIC5 (ENSDNOG00000046707)	RUNX2 (ENSDNOG00000034361) #21	SUPT3H (ENSDNOG00000011043) #22	CDC5L (ENSDNOG00000044224)	ENSDNOG00000036903	SPATS1 (ENSDNOG00000000481)	AARS2 (ENSDNOG00000019300)	TCTE1 (ENSDNOG00000019297)	TMEM151B (ENSDNOG00000011559)	NFKBIE (ENSDNOG00000040817)	SLC35B2 (ENSDNOG00000049618)
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000166577	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00390000003812
Opossum	MODERN SPECIES	1	ENSMODG00000018880	ENSMODG00000028835	ADGRF5 (ENSMODG00000018882)	ENSMODG00000018884	ANKRD66 (ENSMODG00000036384)	PLA2G7 (ENSMODG00000018886)	TDRD6 (ENSMODG00000018889)	SLC25A27 (ENSMODG00000042004)	CYP39A1 (ENSMODG00000018894)	RCAN2 (ENSMODG00000039825)	ENSMODG00000027577	ENPP5 (ENSMODG00000018907)	ENPP4 (ENSMODG00000018909)	ENSMODG00000018910	RUNX2 (ENSMODG00000018912) #21	SUPT3H (ENSMODG00000018921) #22	ENSMODG00000018923	ENSMODG00000040746	AARS2 (ENSMODG00000018926)	ENSMODG00000023532	TMEM151B (ENSMODG00000037039)	NFKBIE (ENSMODG00000018929)	SLC35B2 (ENSMODG00000018930)	ENSMODG00000018933	ENSMODG00000018935	TMEM63B (ENSMODG00000018941)	MRPL14 (ENSMODG00000018945)	ENSMODG00000025685	VEGFA (ENSMODG00000018950)	MRPS18A (ENSMODG00000018952)	ENSMODG00000038008
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000166577	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00390000003812
Diprotodontia	ANCESTRAL SPECIES	37	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b.e	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00390000003812
Wallaby	MODERN SPECIES	9596																SUPT3H (ENSMEUG00000002645) #22
Diprotodontia_a	ANCESTRAL SPECIES	36	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000161228	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000164139	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922.a	ENSGT00390000006786	ENSGT00940000158246	ENSGT00940000159341	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.i.b	ENSGT00950000182898.a.a.a.a.b.e	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00390000003812
koala	MODERN SPECIES	54	ENSPCIG00000012640	CD2AP (ENSPCIG00000033708)	TNFRSF21 (ENSPCIG00000014371)	ENSPCIG00000027689	ENSPCIG00000027680	MEP1A (ENSPCIG00000007225)	ANKRD66 (ENSPCIG00000027678)	PLA2G7 (ENSPCIG00000027677)	TDRD6 (ENSPCIG00000027676)	CYP39A1 (ENSPCIG00000009964)	RCAN2 (ENSPCIG00000029197)	ENPP5 (ENSPCIG00000024752)	ENPP4 (ENSPCIG00000024754)	ENSPCIG00000024756	RUNX2 (ENSPCIG00000024761) #21	SUPT3H (ENSPCIG00000000688) #22	CDC5L (ENSPCIG00000024040)	ENSPCIG00000024044	AARS2 (ENSPCIG00000024045)	TCTE1 (ENSPCIG00000024050)	TMEM151B (ENSPCIG00000024053)	NFKBIE (ENSPCIG00000012863)	SLC35B2 (ENSPCIG00000036241)	ENSPCIG00000012868	ENSPCIG00000012871	TMEM63B (ENSPCIG00000014905)	MRPL14 (ENSPCIG00000014895)
Common wonbat	MODERN SPECIES	1061	CD2AP (ENSVURG00010004022)	TNFRSF21 (ENSVURG00010004150)	ADGRF1 (ENSVURG00010004166)	ADGRF5 (ENSVURG00010004202)	ENSVURG00010004242	ENSVURG00010004261	ANKRD66 (ENSVURG00010004273)	PLA2G7 (ENSVURG00010004284)	TDRD6 (ENSVURG00010004308)	CYP39A1 (ENSVURG00010004407)	RCAN2 (ENSVURG00010004453)	ENPP5 (ENSVURG00010004464)	ENPP4 (ENSVURG00010004470)	CLIC5 (ENSVURG00010004484)	RUNX2 (ENSVURG00010004510) #21	SUPT3H (ENSVURG00010004557) #22	ENSVURG00010004604	CDC5L (ENSVURG00010004630)	ENSVURG00010004664	AARS2 (ENSVURG00010004679)	TCTE1 (ENSVURG00010004721)	TMEM151B (ENSVURG00010004729)	NFKBIE (ENSVURG00010004736)	SLC35B2 (ENSVURG00010004750)	ENSVURG00010004773	SLC29A1 (ENSVURG00010004838)	TMEM63B (ENSVURG00010004884)	MRPL14 (ENSVURG00010004920)	VEGFA (ENSVURG00010004952)	RSPH9 (ENSVURG00010005039)	MAD2L1BP (ENSVURG00010005048)
Tasmanian devil	MODERN SPECIES	3	ADGRF4 (ENSSHAG00000007150)	ENSSHAG00000028018	CD2AP (ENSSHAG00000002115)	TNFRSF21 (ENSSHAG00000017996)	ADGRF1 (ENSSHAG00000017629)	ADGRF5 (ENSSHAG00000017323)	ENSSHAG00000017223	TDRD6 (ENSSHAG00000016901)	ENSSHAG00000016942	RCAN2 (ENSSHAG00000029688)	ENSSHAG00000014961	ENPP5 (ENSSHAG00000014884)	CLIC5 (ENSSHAG00000025348)	ENPP4 (ENSSHAG00000032374)	RUNX2 (ENSSHAG00000009950) #21	SUPT3H (ENSSHAG00000003305) #22	CDC5L (ENSSHAG00000017642)	ENSSHAG00000030708	AARS2 (ENSSHAG00000017514)	NFKBIE (ENSSHAG00000021391)	TMEM151B (ENSSHAG00000024559)	SLC35B2 (ENSSHAG00000023658)	ENSSHAG00000017428	SLC29A1 (ENSSHAG00000017372)	TMEM63B (ENSSHAG00000017114)	MRPL14 (ENSSHAG00000001453)	ENSSHAG00000015515	MRPS18A (ENSSHAG00000030116)	RSPH9 (ENSSHAG00000014967)	MAD2L1BP (ENSSHAG00000030158)	GTPBP2 (ENSSHAG00000024911)
Platypus	MODERN SPECIES	20	TNFRSF21 (ENSOANG00000008278)	ADGRF1 (ENSOANG00000008277)	ADGRF5 (ENSOANG00000008276)	ENSOANG00000008275	ANKRD66 (ENSOANG00000031254)	PLA2G7 (ENSOANG00000030517)	ENSOANG00000008274	SLC25A27 (ENSOANG00000008273)	CYP39A1 (ENSOANG00000008272)	RCAN2 (ENSOANG00000050516)	ENSOANG00000028698	ENPP5 (ENSOANG00000008270)	ENPP4 (ENSOANG00000008268)	ENSOANG00000008266	RUNX2 (ENSOANG00000041580) #21	SUPT3H (ENSOANG00000045136) #22	CDC5L (ENSOANG00000008262)	MMUT (ENSOANG00000008261)	ENSOANG00000051205	GLYATL3 (ENSOANG00000036913)	RHAG (ENSOANG00000008253)	ENSOANG00000008252	EHD3 (ENSOANG00000041382)	ENSOANG00000008248	GALNT14 (ENSOANG00000008247)	ENSOANG00000044949	ENSOANG00000008244	LCLAT1 (ENSOANG00000037466)	LBH (ENSOANG00000001778)	YPEL5 (ENSOANG00000045442)	ENSOANG00000001776
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000162401	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162362	ENSGT00940000156439.r.a	ENSGT00940000162013	ENSGT00940000156439.s	ENSGT00950000182848.d
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00550000075090	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A.j	ENSGT00940000153141.A.i	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.f.b	ENSGT00940000156618.f.a
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00550000075090	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A.j	ENSGT00940000153141.A.i	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00940000162013	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.f.b	ENSGT00940000156618.f.a
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A.j	ENSGT00940000153141.A.i	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00940000162013	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.f.b	ENSGT00940000156618.f.a
Three-toed box turtle	MODERN SPECIES	15	CD2AP (ENSTMTG00000006828)	TNFRSF21 (ENSTMTG00000006933)	ADGRF5 (ENSTMTG00000006946)	ENSTMTG00000006990	ENSTMTG00000007087	PLA2G7 (ENSTMTG00000007102)	TDRD6 (ENSTMTG00000007128)	SLC25A27 (ENSTMTG00000007158)	ENSTMTG00000007183	ENSTMTG00000007210	RCAN2 (ENSTMTG00000007258)	ENPP5 (ENSTMTG00000007299)	ENPP4 (ENSTMTG00000007316)	CLIC5 (ENSTMTG00000007327)	RUNX2 (ENSTMTG00000007345) #21	SUPT3H (ENSTMTG00000007385) #22	CDC5L (ENSTMTG00000007409)	ENSTMTG00000007443	MMUT (ENSTMTG00000007460)	CENPQ (ENSTMTG00000007473)	GLYATL3 (ENSTMTG00000007494)	RHAG (ENSTMTG00000007519)	CRISP2 (ENSTMTG00000007573)	ENSTMTG00000007961	CRISP3 (ENSTMTG00000007986)	ENSTMTG00000008013	TFAP2D (ENSTMTG00000008019)	TFAP2B (ENSTMTG00000008044)	PKHD1 (ENSTMTG00000008105)	ENSTMTG00000008721	ENSTMTG00000008740
painted turtle	MODERN SPECIES	2397	TNFRSF21 (ENSCPBG00000021652)	ADGRF5 (ENSCPBG00000021654)	ENSCPBG00000021656	ENSCPBG00000021657	ANKRD66 (ENSCPBG00000021658)	PLA2G7 (ENSCPBG00000021659)	IMP3 (ENSCPBG00000021662)	TDRD6 (ENSCPBG00000021664)	SLC25A27 (ENSCPBG00000021665)	ENSCPBG00000021668	ENSCPBG00000021672	ENPP5 (ENSCPBG00000021673)	ENPP4 (ENSCPBG00000021674)	CLIC5 (ENSCPBG00000021676)	RUNX2 (ENSCPBG00000021680) #21	SUPT3H (ENSCPBG00000021682) #22	SCAMP1 (ENSCPBG00000021684)	ENSCPBG00000021687	TFAP2D (ENSCPBG00000021688)	TFAP2B (ENSCPBG00000021691)	PKHD1 (ENSCPBG00000021692)	ENSCPBG00000021703	ENSCPBG00000002351	ENSCPBG00000002473	MCM3 (ENSCPBG00000002873)	PAQR8 (ENSCPBG00000002902)	EFHC1 (ENSCPBG00000002922)	TRAM2 (ENSCPBG00000002965)	XKR5 (ENSCPBG00000002982)	ENSCPBG00000003006	ENSCPBG00000003028
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A.j	ENSGT00940000153141.A.i	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.f.b	ENSGT00940000156618.f.a	ENSGT01050000244824.B	ENSGT00940000159860
Abingdon island giant tortoise	MODERN SPECIES	2202														CLIC5 (ENSCABG00000022867)	RUNX2 (ENSCABG00000022863) #21	SUPT3H (ENSCABG00000022861) #22	CDC5L (ENSCABG00000022859)	ENSCABG00000022855	MMUT (ENSCABG00000022854)
Goode s thornscrub tortoise	MODERN SPECIES	17	TNFRSF21 (ENSGEVG00005011263)	ADGRF5 (ENSGEVG00005011006)	ENSGEVG00005010900	ENSGEVG00005010825	IMP3 (ENSGEVG00005010797)	PLA2G7 (ENSGEVG00005010524)	TDRD6 (ENSGEVG00005010476)	SLC25A27 (ENSGEVG00005010445)	ENSGEVG00005010385	ENSGEVG00005010306	RCAN2 (ENSGEVG00005010212)	ENPP5 (ENSGEVG00005010187)	ENPP4 (ENSGEVG00005010123)	CLIC5 (ENSGEVG00005010047)	RUNX2 (ENSGEVG00005010022) #21	SUPT3H (ENSGEVG00005009630) #22	CDC5L (ENSGEVG00005009562)	ENSGEVG00005009530	ENSGEVG00005009501	MMUT (ENSGEVG00005009448)	CENPQ (ENSGEVG00005009413)	ENSGEVG00005009242	ENSGEVG00005009050	RHAG (ENSGEVG00005009014)	CRISP2 (ENSGEVG00005008958)	ENSGEVG00005008897	TFAP2D (ENSGEVG00005008838)	TFAP2B (ENSGEVG00005008797)	PKHD1 (ENSGEVG00005008582)	ENSGEVG00005008539	ENSGEVG00005008475
Chinese turtle	MODERN SPECIES	883	CD2AP (ENSPSIG00000006044)	TNFRSF21 (ENSPSIG00000017951)	ENSPSIG00000017917	ENSPSIG00000017878	ENSPSIG00000017759	ANKRD66 (ENSPSIG00000017753)	PLA2G7 (ENSPSIG00000017278)	ENSPSIG00000017275	SLC25A27 (ENSPSIG00000017173)	CYP39A1 (ENSPSIG00000015719)	RCAN2 (ENSPSIG00000015499)	ENPP5 (ENSPSIG00000014959)	ENPP4 (ENSPSIG00000014832)	CLIC5 (ENSPSIG00000014636)	RUNX2 (ENSPSIG00000014293) #21	SUPT3H (ENSPSIG00000013543) #22	CDC5L (ENSPSIG00000013123)	ENSPSIG00000001981	ENSPSIG00000013081	MMUT (ENSPSIG00000010187)
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764
Aves	ANCESTRAL SPECIES	10	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a.a	ENSGT01100000263477.F.a.b.b	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b	ENSGT01050000244824.B
Great tit	MODERN SPECIES	22	TNFRSF21 (ENSPMJG00000012975)	ADGRF5 (ENSPMJG00000012976)	ENSPMJG00000012977	ENSPMJG00000012978	PLA2G7 (ENSPMJG00000012979)	IMP3 (ENSPMJG00000012980)	TDRD6 (ENSPMJG00000012981)	SLC25A27 (ENSPMJG00000012982)	CYP39A1 (ENSPMJG00000012983)	RCAN2 (ENSPMJG00000012984)	ENPP5 (ENSPMJG00000012985)	ENPP4 (ENSPMJG00000012986)	CLIC5 (ENSPMJG00000012987)	RUNX2 (ENSPMJG00000012989) #21	ENSPMJG00000012990	SUPT3H (ENSPMJG00000012991) #22	CDC5L (ENSPMJG00000012995)	ENSPMJG00000012996	ENSPMJG00000012997	MMUT (ENSPMJG00000012998)	CENPQ (ENSPMJG00000012999)	ENSPMJG00000013000	RHAG (ENSPMJG00000013001)	CRISP2 (ENSPMJG00000013002)	ENSPMJG00000013003	ENSPMJG00000013005	TFAP2D (ENSPMJG00000013006)	TFAP2B (ENSPMJG00000013007)	PKHD1 (ENSPMJG00000013009)	ENSPMJG00000013010	ENSPMJG00000013012
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT01100000263477.F.a.a.a	ENSGT01100000263477.F.a.b.a	ENSGT01100000263477.F.a.a.b	ENSGT01100000263477.F.a.b.b	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171.f #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b	ENSGT01050000244824.B
Flycatcher	MODERN SPECIES	21	ENSFALG00000001547	ENSFALG00000025376	ENSFALG00000014827	ANKRD66 (ENSFALG00000001543)	ENSFALG00000014811	PLA2G7 (ENSFALG00000026098)	TDRD6 (ENSFALG00000001522)	SLC25A27 (ENSFALG00000027971)	CYP39A1 (ENSFALG00000001508)	ENSFALG00000028621	RCAN2 (ENSFALG00000027492)	ENPP4 (ENSFALG00000001500)	ENPP5 (ENSFALG00000023301)	CLIC5 (ENSFALG00000001496)	RUNX2 (ENSFALG00000001493) #21	SUPT3H (ENSFALG00000012672) #22	CDC5L (ENSFALG00000012688)	ENSFALG00000025757	ENSFALG00000012705	MMUT (ENSFALG00000012716)	CENPQ (ENSFALG00000012725)	ENSFALG00000023033	RHAG (ENSFALG00000012740)	CRISP2 (ENSFALG00000012752)	ENSFALG00000012765	TFAP2D (ENSFALG00000012770)	TFAP2B (ENSFALG00000012772)	ENSFALG00000028076	PKHD1 (ENSFALG00000002049)	ENSFALG00000002061	ENSFALG00000002066
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT01100000263477.F.a.a.a	ENSGT01100000263477.F.a.b.a.b	ENSGT00550000075090	ENSGT01100000263477.F.a.a.b	ENSGT01100000263477.F.a.b.b	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171.f #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b	ENSGT01050000244824.B
Medium ground finch	MODERN SPECIES	80														ENSGFOG00000001014	RUNX2 (ENSGFOG00000001030) #21	SUPT3H (ENSGFOG00000001051) #22	CDC5L (ENSGFOG00000001077)	ENSGFOG00000001103	ENSGFOG00000001113	MMUT (ENSGFOG00000001120)	CENPQ (ENSGFOG00000001131)	ENSGFOG00000001156	RHAG (ENSGFOG00000001210)	CRISP2 (ENSGFOG00000001225)	ENSGFOG00000001233	TFAP2D (ENSGFOG00000001241)	TFAP2B (ENSGFOG00000001259)	ENSGFOG00000001279	PKHD1 (ENSGFOG00000001306)	ENSGFOG00000001354	ENSGFOG00000001374
Passeroidea	ANCESTRAL SPECIES		ENSGT01100000263477.F.a.b.a.b	ENSGT01100000263477.F.a.b.a.a	ENSGT01100000263477.F.a.a.b	ENSGT01100000263477.F.a.b.b	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171.f #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b	ENSGT01050000244824.B
Zebra finch	MODERN SPECIES	23	ENSTGUG00000013219	ENSTGUG00000013224	ENSTGUG00000025510	ENSTGUG00000024652	ENSTGUG00000018528	ANKRD66 (ENSTGUG00000013227)	IMP3 (ENSTGUG00000013228)	PLA2G7 (ENSTGUG00000013229)	TDRD6 (ENSTGUG00000024560)	SLC25A27 (ENSTGUG00000013236)	CYP39A1 (ENSTGUG00000013240)	ENPP5 (ENSTGUG00000023070)	ENPP4 (ENSTGUG00000013245)	CLIC5 (ENSTGUG00000023278)	RUNX2 (ENSTGUG00000023364) #21	SUPT3H (ENSTGUG00000013250) #22	CDC5L (ENSTGUG00000013251)	ENSTGUG00000023300	ENSTGUG00000013256	MMUT (ENSTGUG00000013257)	ENSTGUG00000023639	ENSTGUG00000013260	RHAG (ENSTGUG00000013262)	CRISP2 (ENSTGUG00000024271)	ENSTGUG00000013263	TFAP2D (ENSTGUG00000013264)	TFAP2B (ENSTGUG00000022691)	PKHD1 (ENSTGUG00000013268)	ENSTGUG00000013272	ENSTGUG00000013274	MCM3 (ENSTGUG00000013275)
Common canary	MODERN SPECIES	1	ENSSCAG00000014064	ENSSCAG00000014067	ENSSCAG00000014072	ENSSCAG00000014076	ANKRD66 (ENSSCAG00000014080)	PLA2G7 (ENSSCAG00000014085)	IMP3 (ENSSCAG00000014102)	TDRD6 (ENSSCAG00000014111)	SLC25A27 (ENSSCAG00000014137)	CYP39A1 (ENSSCAG00000014141)	RCAN2 (ENSSCAG00000014154)	ENPP5 (ENSSCAG00000014161)	ENPP4 (ENSSCAG00000014158)	CLIC5 (ENSSCAG00000014165)	RUNX2 (ENSSCAG00000014170) #21	SUPT3H (ENSSCAG00000014193) #22	CDC5L (ENSSCAG00000014215)	ENSSCAG00000014225	ENSSCAG00000014230	MMUT (ENSSCAG00000014237)	CENPQ (ENSSCAG00000014246)	ENSSCAG00000014256	RHAG (ENSSCAG00000014264)	CRISP2 (ENSSCAG00000014273)	ENSSCAG00000014279	TFAP2D (ENSSCAG00000014286)	TFAP2B (ENSSCAG00000014289)	PKHD1 (ENSSCAG00000014315)	ENSSCAG00000014390	ENSSCAG00000014404	MCM3 (ENSSCAG00000014410)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00960000189362	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00600000085213	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b
Golden eagle	MODERN SPECIES	6	ENSACCG00020008333	ENSACCG00020008322	ENSACCG00020008303	ENSACCG00020008287	ANKRD66 (ENSACCG00020008279)	IMP3 (ENSACCG00020008265)	PLA2G7 (ENSACCG00020008248)	TDRD6 (ENSACCG00020008191)	SLC25A27 (ENSACCG00020008153)	CYP39A1 (ENSACCG00020008141)	RCAN2 (ENSACCG00020008131)	ENPP5 (ENSACCG00020008124)	ENPP4 (ENSACCG00020008118)	CLIC5 (ENSACCG00020008109)	RUNX2 (ENSACCG00020008097) #21	SUPT3H (ENSACCG00020008080) #22	CDC5L (ENSACCG00020008066)	ENSACCG00020009222	ENSACCG00020009214	MMUT (ENSACCG00020009201)	CENPQ (ENSACCG00020009178)	ENSACCG00020009158	RHAG (ENSACCG00020009143)	CRISP2 (ENSACCG00020009125)	TFAP2D (ENSACCG00020009109)	TFAP2B (ENSACCG00020009084)	PKHD1 (ENSACCG00020009046)	ENSACCG00020008978	ENSACCG00020008950	MCM3 (ENSACCG00020008930)	PAQR8 (ENSACCG00020008905)
Kakapo	MODERN SPECIES	23	TNFRSF21 (ENSSHBG00005010879)	ADGRF5 (ENSSHBG00005010936)	ENSSHBG00005011006	ENSSHBG00005011057	ENSSHBG00005011083	IMP3 (ENSSHBG00005011117)	PLA2G7 (ENSSHBG00005011142)	TDRD6 (ENSSHBG00005011318)	SLC25A27 (ENSSHBG00005011689)	CYP39A1 (ENSSHBG00005011722)	RCAN2 (ENSSHBG00005011744)	ENPP5 (ENSSHBG00005011775)	ENPP4 (ENSSHBG00005011788)	CLIC5 (ENSSHBG00005011817)	RUNX2 (ENSSHBG00005011855) #21	SUPT3H (ENSSHBG00005011873) #22	ENSSHBG00005011887	CDC5L (ENSSHBG00005011911)	ENSSHBG00005011936	ENSSHBG00005011951	MMUT (ENSSHBG00005011965)	CENPQ (ENSSHBG00005011988)	ENSSHBG00005012003	RHAG (ENSSHBG00005012046)	CRISP2 (ENSSHBG00005012078)	ENSSHBG00005012112	TFAP2D (ENSSHBG00005012161)	TFAP2B (ENSSHBG00005012191)	ENSSHBG00005012349	ENSSHBG00005012367	MCM3 (ENSSHBG00005012482)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764
Anatidae	ANCESTRAL SPECIES		ENSGT00940000156212.j	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00960000189362	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764
Duck	MODERN SPECIES	21	TNFRSF21 (ENSAPLG00000003358)	ENSAPLG00000019835	ADGRF5 (ENSAPLG00000004634)	ENSAPLG00000004740	ENSAPLG00000005460	IMP3 (ENSAPLG00000016868)	PLA2G7 (ENSAPLG00000012546)	TDRD6 (ENSAPLG00000021604)	SLC25A27 (ENSAPLG00000013008)	CYP39A1 (ENSAPLG00000013275)	RCAN2 (ENSAPLG00000026664)	ENPP5 (ENSAPLG00000013625)	ENPP4 (ENSAPLG00000013668)	CLIC5 (ENSAPLG00000013722)	RUNX2 (ENSAPLG00000011653) #21	SUPT3H (ENSAPLG00000015836) #22	CDC5L (ENSAPLG00000015586)	ENSAPLG00000026976	ENSAPLG00000015462	MMUT (ENSAPLG00000015104)	CENPQ (ENSAPLG00000015001)	GLYATL3 (ENSAPLG00000028347)	CD2AP (ENSAPLG00000014709)	ENSAPLG00000014666	OPN5 (ENSAPLG00000014644)	PTCHD4 (ENSAPLG00000014556)	ENSAPLG00000014546	MRPL19 (ENSAPLG00000014401)	GCFC2 (ENSAPLG00000014163)	ENSAPLG00000013325	ENSAPLG00000013321
Pink-footed goose	MODERN SPECIES	47	ADGRF5 (ENSABRG00000002682)	ENSABRG00000002706	ENSABRG00000002712	ENSABRG00000002743	ENSABRG00000002794	IMP3 (ENSABRG00000002800)	PLA2G7 (ENSABRG00000002848)	TDRD6 (ENSABRG00000002869)	SLC25A27 (ENSABRG00000002882)	CYP39A1 (ENSABRG00000003071)	RCAN2 (ENSABRG00000003102)	ENPP5 (ENSABRG00000003115)	ENPP4 (ENSABRG00000003129)	CLIC5 (ENSABRG00000003150)	RUNX2 (ENSABRG00000003191) #21	SUPT3H (ENSABRG00000003314) #22	CDC5L (ENSABRG00000003359)	ENSABRG00000003390	ENSABRG00000003415	MMUT (ENSABRG00000003449)	CENPQ (ENSABRG00000003478)	GLYATL3 (ENSABRG00000003506)	ENSABRG00000003534	ENSABRG00000003543	RHAG (ENSABRG00000003580)	CRISP2 (ENSABRG00000003618)	ENSABRG00000003661	TFAP2D (ENSABRG00000003701)	TFAP2B (ENSABRG00000003733)	ENSABRG00000003752	PKHD1 (ENSABRG00000003777)
Phasianidae	ANCESTRAL SPECIES	28	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00950000182869.e.b.e.a	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00940000156439.r.a	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a
Japanese quail	MODERN SPECIES	21	CD2AP (ENSCJPG00005002786)	TNFRSF21 (ENSCJPG00005002782)	ENSCJPG00005002779	ENSCJPG00005002775	ENSCJPG00005002772	ANKRD66 (ENSCJPG00005002770)	IMP3 (ENSCJPG00005002767)	PLA2G7 (ENSCJPG00005002760)	ENSCJPG00005002752	ENSCJPG00005002749	CYP39A1 (ENSCJPG00005002748)	RCAN2 (ENSCJPG00005002747)	ENPP4 (ENSCJPG00005002745)	CLIC5 (ENSCJPG00005002744)	RUNX2 (ENSCJPG00005002743) #21	SUPT3H (ENSCJPG00005002741) #22	CDC5L (ENSCJPG00005002523)	ENSCJPG00005002519	ENSCJPG00005002516	MMUT (ENSCJPG00005002514)	CENPQ (ENSCJPG00005002511)	ENSCJPG00005002508	ENSCJPG00005002505	RHAG (ENSCJPG00005002504)	CRISP2 (ENSCJPG00005002502)	ENSCJPG00005002501	TFAP2D (ENSCJPG00005002497)	TFAP2B (ENSCJPG00005002491)	PKHD1 (ENSCJPG00005001217)	ENSCJPG00005001139	ENSCJPG00005001135
Phasianidae_b	ANCESTRAL SPECIES	29	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT01100000263477.F.a	ENSGT00610000086772	ENSGT00550000075090	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00950000182869.e.b.e.a	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00940000162510.l	ENSGT00940000162510.k	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162013	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000156618.e.a	ENSGT00940000156618.e.b
Chicken	MODERN SPECIES	22	ADGRF4 (ENSGALG00010008415)	CD2AP (ENSGALG00010008394)	TNFRSF21 (ENSGALG00010008343)	ADGRF5 (ENSGALG00010008316)	MEP1A (ENSGALG00010008307)	TAS2R7 (ENSGALG00010011470)	ANKRD66 (ENSGALG00010008299)	IMP3 (ENSGALG00010011463)	PLA2G7 (ENSGALG00010008293)	ENSGALG00010008287	CYP39A1 (ENSGALG00010008278)	RCAN2 (ENSGALG00010008240)	ENPP4 (ENSGALG00010008201)	CLIC5 (ENSGALG00010008182)	RUNX2 (ENSGALG00010008166) #21	SUPT3H (ENSGALG00010008159) #22	ENSGALG00010008124	CDC5L (ENSGALG00010008120)	OPN5L2 (ENSGALG00010008109)	MMUT (ENSGALG00010008105)	CENPQ (ENSGALG00010008101)	CYP2AC2 (ENSGALG00010011879)	CYP2AC1 (ENSGALG00010008084)	RHAG (ENSGALG00010008074)	CRISP2 (ENSGALG00010008061)	CRISP2 (ENSGALG00010008054)	TFAP2D (ENSGALG00010007848)	TFAP2B (ENSGALG00010007845)	PKHD1 (ENSGALG00010007934)	IL17A (ENSGALG00010007922)	IL17F (ENSGALG00010007919)
Turkey	MODERN SPECIES	11	ENSMGAG00000014236	ENSMGAG00000014229	ENSMGAG00000014245	ENSMGAG00000020296	ENSMGAG00000017668	ENSMGAG00000014249	CRISP2 (ENSMGAG00000020479)	ENSMGAG00000014257	ENSMGAG00000014251	ENSMGAG00000014250	ENSMGAG00000019876	ENSMGAG00000014261	ENSMGAG00000014259	ENSMGAG00000014263	ENSMGAG00000018734	ENSMGAG00000014265 #22	ENSMGAG00000020465	ENSMGAG00000014267 #21	ENSMGAG00000014269	ENSMGAG00000014273	ENSMGAG00000014275	CYP39A1 (ENSMGAG00000014278)	ENSMGAG00000014299	ENSMGAG00000018094	ADGRF5 (ENSMGAG00000014284)	ENSMGAG00000014282	ENSMGAG00000017406	ENSMGAG00000014271	ENSMGAG00000020691	ENSMGAG00000014294	ENSMGAG00000019201
African ostrich	MODERN SPECIES	372	TNFRSF21 (ENSSCUG00000000552)	CD2AP (ENSSCUG00000000557)	OPN5 (ENSSCUG00000000580)	PTCHD4 (ENSSCUG00000000583)	ENSSCUG00000000586	ENSSCUG00000000589	TDRD6 (ENSSCUG00000000594)	PLA2G7 (ENSSCUG00000000597)	SLC25A27 (ENSSCUG00000000603)	CYP39A1 (ENSSCUG00000000613)	RCAN2 (ENSSCUG00000000624)	ENPP5 (ENSSCUG00000000628)	ENPP4 (ENSSCUG00000000633)	CLIC5 (ENSSCUG00000000643)	RUNX2 (ENSSCUG00000000657) #21	SUPT3H (ENSSCUG00000000673) #22	CDC5L (ENSSCUG00000000689)	ENSSCUG00000000695	ENSSCUG00000000696
Australian saltwater crocodile	MODERN SPECIES	38	ADGRF5 (ENSCPRG00005000513)	ENSCPRG00005000554	ENSCPRG00005000617	ANKRD66 (ENSCPRG00005000667)	ENSCPRG00005000685	IMP3 (ENSCPRG00005000701)	PLA2G7 (ENSCPRG00005000721)	TDRD6 (ENSCPRG00005000742)	SLC25A27 (ENSCPRG00005000814)	CYP39A1 (ENSCPRG00005000817)	RCAN2 (ENSCPRG00005000861)	ENPP5 (ENSCPRG00005000867)	ENPP4 (ENSCPRG00005000876)	CLIC5 (ENSCPRG00005000925)	RUNX2 (ENSCPRG00005000966) #21	SUPT3H (ENSCPRG00005001030) #22	CDC5L (ENSCPRG00005001067)	ENSCPRG00005001084	MMUT (ENSCPRG00005001087)	CENPQ (ENSCPRG00005001090)	GLYATL3 (ENSCPRG00005001102)	ENSCPRG00005001147	RHAG (ENSCPRG00005001518)	ENSCPRG00005001534	CRISP2 (ENSCPRG00005001568)	ENSCPRG00005001610	ENSCPRG00005001719	ENSCPRG00005001748	ENSCPRG00005001766	TFAP2D (ENSCPRG00005001788)	TFAP2B (ENSCPRG00005001794)
Lepidosauria	ANCESTRAL SPECIES		ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000161979.B	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162362	ENSGT00710000108307	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000159860	ENSGT01050000244824.B
Episquamata	ANCESTRAL SPECIES		ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000157043.n	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000162362.b	ENSGT00710000108307	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000159860	ENSGT01050000244824.B	ENSGT00940000156618	ENSGT00940000160697
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a	ENSGT00940000157043.n	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000162362.b	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000159860	ENSGT01050000244824.B	ENSGT00940000156618	ENSGT00940000160697	ENSGT00950000182848.c.b.b.b
Elapidae	ANCESTRAL SPECIES		ENSGT00940000154096.b.b.b.a	ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a.w	ENSGT00940000157043.n	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.s.a.a.b	ENSGT00940000162510.s.a.b.b	ENSGT00940000162510.s.a.a.a.a.a	ENSGT00940000162510.s.a.a.a.b	ENSGT00940000162510.s.b	ENSGT00940000162510.t.a	ENSGT00940000162510.t.b	ENSGT00950000182844.b.a	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000159860
Elapidae_a	ANCESTRAL SPECIES	39	ENSGT00940000154096.b.b.b.a	ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a.w	ENSGT00940000157043.n	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510.s.a.a.b	ENSGT00940000162510.s.a.b.b
Acanthophiinae	ANCESTRAL SPECIES	39	ENSGT00940000154096.b.b.b.a	ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00950000183111.a.a.w	ENSGT00940000157043.n	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000179889.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000011892	ENSGT00950000183133.f.h	ENSGT00940000162510.s.a.a.b	ENSGT00940000162510.s.a.b.b
Eastern brown snake	MODERN SPECIES	36	MRPL19 (ENSPTXG00000002207)	EVA1A (ENSPTXG00000002206)	PTCHD4 (ENSPTXG00000002204)	OPN5 (ENSPTXG00000002203)	CD2AP (ENSPTXG00000002202)	TNFRSF21 (ENSPTXG00000002201)	ADGRF5 (ENSPTXG00000002200)	ENSPTXG00000002196	ENSPTXG00000002191	PLA2G7 (ENSPTXG00000002190)	TDRD6 (ENSPTXG00000002146)	RCAN2 (ENSPTXG00000002140)	ENPP4 (ENSPTXG00000002137)	CLIC5 (ENSPTXG00000002134)	RUNX2 (ENSPTXG00000002132) #21	SUPT3H (ENSPTXG00000002129) #22	CDC5L (ENSPTXG00000002126)	MMUT (ENSPTXG00000002087)	GLYATL3 (ENSPTXG00000001934)	ENSPTXG00000001926
Mainland tiger snake	MODERN SPECIES	203										TDRD6 (ENSNSUG00000016792)	RCAN2 (ENSNSUG00000016811)	ENPP4 (ENSNSUG00000016812)	CLIC5 (ENSNSUG00000016813)	ENSNSUG00000016815	RUNX2 (ENSNSUG00000016816) #21	SUPT3H (ENSNSUG00000016871) #22	CDC5L (ENSNSUG00000016872)	MMUT (ENSNSUG00000016873)	GLYATL3 (ENSNSUG00000016946)	ENSNSUG00000016954	ENSNSUG00000016955	ENSNSUG00000016956	ENSNSUG00000016957
Indian cobra	MODERN SPECIES		PTCHD4 (ENSNNAG00000001098)	OPN5 (ENSNNAG00000001080)	CD2AP (ENSNNAG00000001059)	TNFRSF21 (ENSNNAG00000001034)	ADGRF5 (ENSNNAG00000000995)	ENSNNAG00000000961	ENSNNAG00000000943	ENSNNAG00000000901	ENSNNAG00000000708	PLA2G7 (ENSNNAG00000000641)	TDRD6 (ENSNNAG00000000595)	RCAN2 (ENSNNAG00000000571)	ENPP4 (ENSNNAG00000000558)	CLIC5 (ENSNNAG00000000540)	RUNX2 (ENSNNAG00000000501) #21	SUPT3H (ENSNNAG00000000470) #22	CDC5L (ENSNNAG00000000455)	MMUT (ENSNNAG00000000438)	CENPQ (ENSNNAG00000000424)	GLYATL3 (ENSNNAG00000000413)	ENSNNAG00000000401	ENSNNAG00000000364	ENSNNAG00000000271	ENSNNAG00000000238	ENSNNAG00000000234	ENSNNAG00000000226	ENSNNAG00000014629	ENSNNAG00000014612	RHAG (ENSNNAG00000014592)	TRAM2 (ENSNNAG00000014579)	EFHC1 (ENSNNAG00000014556)
Lizard	MODERN SPECIES		PTCHD4 (ENSACAG00000013506)	OPN5 (ENSACAG00000013496)	ENSACAG00000039818	CD2AP (ENSACAG00000013411)	TNFRSF21 (ENSACAG00000013394)	ADGRF5 (ENSACAG00000013326)	ENSACAG00000013256	ENSACAG00000027033	ENSACAG00000013189	PLA2G7 (ENSACAG00000013175)	TDRD6 (ENSACAG00000013170)	CYP39A1 (ENSACAG00000013096)	ENPP4 (ENSACAG00000013087)	CLIC5 (ENSACAG00000013030)	RUNX2 (ENSACAG00000013003) #21	SUPT3H (ENSACAG00000012944) #22	CDC5L (ENSACAG00000012874)	ENSACAG00000041363	ENSACAG00000037063	ENSACAG00000012856	MMUT (ENSACAG00000012754)	ENSACAG00000029549	ENSACAG00000040210	ENSACAG00000012613	ENSACAG00000012166	ENSACAG00000042255	ENSACAG00000043936	ENSACAG00000038338	RHAG (ENSACAG00000012398)	ENSACAG00000012389	ENSACAG00000012387
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000155936.b	ENSGT00390000009415	ENSGT00940000154096.b.b.b.a	ENSGT00940000156827	ENSGT01100000263524.B.a	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00390000005599	ENSGT00950000183133.f.h	ENSGT00940000162510	ENSGT00950000182844.b.a	ENSGT00940000156439.r.b	ENSGT00940000162362.a.a	ENSGT00710000108307	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a.c	ENSGT00940000159860	ENSGT01050000244824.B	ENSGT00940000156618
Common wall lizard	MODERN SPECIES	11	CD2AP (ENSPMRG00000006511)	TNFRSF21 (ENSPMRG00000006550)	ENSPMRG00000006556	ENSPMRG00000006560	ENSPMRG00000006561	ADGRF5 (ENSPMRG00000006571)	ENSPMRG00000006609	ENSPMRG00000006622	ENSPMRG00000006629	PLA2G7 (ENSPMRG00000006646)	TDRD6 (ENSPMRG00000006652)	CYP39A1 (ENSPMRG00000006660)	RCAN2 (ENSPMRG00000006668)	CLIC5 (ENSPMRG00000006681)	RUNX2 (ENSPMRG00000006689) #21	SUPT3H (ENSPMRG00000006700) #22	CDC5L (ENSPMRG00000006739)	ENSPMRG00000006754	ENSPMRG00000006761	LGALSL (ENSPMRG00000006765)	ENSPMRG00000006772	ENSPMRG00000006774	PELI1 (ENSPMRG00000006776)	VPS54 (ENSPMRG00000006791)	ENSPMRG00000006830	UGP2 (ENSPMRG00000006840)	ENSPMRG00000006857	MDH1 (ENSPMRG00000006861)	WDPCP (ENSPMRG00000006873)	OTX1 (ENSPMRG00000006891)	EHBP1 (ENSPMRG00000006897)
Argentine black and white tegu	MODERN SPECIES	54								ENSSMRG00000006262	ENSSMRG00000006245	TDRD6 (ENSSMRG00000006234)	CYP39A1 (ENSSMRG00000006230)	ENPP4 (ENSSMRG00000006226)	CLIC5 (ENSSMRG00000006222)	ENSSMRG00000006194	RUNX2 (ENSSMRG00000006169) #21	SUPT3H (ENSSMRG00000006146) #22	CDC5L (ENSSMRG00000006101)	ENSSMRG00000006098	MMUT (ENSSMRG00000006094)	ENSSMRG00000006082	RHAG (ENSSMRG00000006066)	ENSSMRG00000006060	ENSSMRG00000006058	CRISP3 (ENSSMRG00000006050)	ENSSMRG00000006037	ENSSMRG00000006016	TRAM2 (ENSSMRG00000006014)	EFHC1 (ENSSMRG00000005996)	ENSSMRG00000005995	MCM3 (ENSSMRG00000005991)	IL17F (ENSSMRG00000005978)
tuatara	MODERN SPECIES	1601													CLIC5 (ENSSPUG00000006616)	ENSSPUG00000006626	RUNX2 (ENSSPUG00000006640) #21	SUPT3H (ENSSPUG00000006662) #22	CDC5L (ENSSPUG00000006685)	ENSSPUG00000006700
Anura	ANCESTRAL SPECIES	32	ENSGT00940000157566	ENSGT00940000156212	ENSGT00940000154603.B.e.a	ENSGT00940000154603.B.e.b	ENSGT00940000161541.c	ENSGT00950000183111.a.a	ENSGT00610000086772	ENSGT00390000005233.b	ENSGT00940000159049	ENSGT00940000160098	ENSGT00940000153141.A	ENSGT00940000159767	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D	ENSGT00390000011892	ENSGT00940000162510.g.a.a.b	ENSGT00940000162510.g.a.a.a	ENSGT00940000162510.g.a.b
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000007509	ANKRD66 (ENSLLEG00000007488)	PLA2G7 (ENSLLEG00000007439)	TDRD6 (ENSLLEG00000007154)	ENSLLEG00000007114	SLC25A27 (ENSLLEG00000007015)	ENSLLEG00000006998	CYP39A1 (ENSLLEG00000006929)	RCAN2 (ENSLLEG00000006874)	ENPP4 (ENSLLEG00000006839)	ENSLLEG00000006823	ENSLLEG00000006801	CLIC5 (ENSLLEG00000006718)	ENSLLEG00000006691	RUNX2 (ENSLLEG00000006622) #21	ENSLLEG00000006344 #22	CDC5L (ENSLLEG00000006099)	ENSLLEG00000006058	MMUT (ENSLLEG00000005995)	ENSLLEG00000005975	ENSLLEG00000005895	ENSLLEG00000005822	ENSLLEG00000005669	ENSLLEG00000005433	ENSLLEG00000005162	ENSLLEG00000005105	ENSLLEG00000005089	ENSLLEG00000005064	ENSLLEG00000004991	ENSLLEG00000004897	ENSLLEG00000004872
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000021710	DHX8 (ENSLLEG00000021650)	RPL3 (ENSLLEG00000021252)	ENSLLEG00000021214	PDGFB (ENSLLEG00000021129)	ENSLLEG00000020901	ENSLLEG00000020852	CBX7 (ENSLLEG00000020675)	NPTXR (ENSLLEG00000020525)	DNAL4 (ENSLLEG00000020394)	ENSLLEG00000020229	SUN2 (ENSLLEG00000019751)	ENSLLEG00000019203	ENSLLEG00000018755	ENSLLEG00000027144	ENSLLEG00000027052 #22	ENSLLEG00000027032	ENSLLEG00000027018	ENSLLEG00000026997	ENSLLEG00000026930	ENSLLEG00000026913	ENSLLEG00000026893	ENSLLEG00000026879	ENSLLEG00000026797	ENSLLEG00000026774	DMC1 (ENSLLEG00000026647)	ENSLLEG00000026594	ENSLLEG00000026560	CBY1 (ENSLLEG00000026489)	TOMM22 (ENSLLEG00000026450)	ENSLLEG00000026419
Frog	MODERN SPECIES	5	ENSXETG00000039816	ENSXETG00000034341	mep1a (ENSXETG00000016251)	ANKRD66 (ENSXETG00000036377)	pla2g7 (ENSXETG00000004603)	tdrd6 (ENSXETG00000016255)	slc25a27 (ENSXETG00000016256)	cyp39a1 (ENSXETG00000016257)	rcan2 (ENSXETG00000016260)	enpp4 (ENSXETG00000016262)	ENSXETG00000016264	trim69.1 (ENSXETG00000016266)	trim69.2 (ENSXETG00000018877)	clic5 (ENSXETG00000036767)	runx2 (ENSXETG00000001397) #21	supt3h (ENSXETG00000001404) #22	ENSXETG00000045578	ENSXETG00000045907	cdc5l (ENSXETG00000007885)	ENSXETG00000043316	opn8 (ENSXETG00000031523)	mmut (ENSXETG00000029939)	ENSXETG00000032075	cyp2b6 (ENSXETG00000011117)	cyp2e1 (ENSXETG00000033380)	ENSXETG00000033141	cyp2a13l (ENSXETG00000011104)	XB5952314 (ENSXETG00000026927)	ENSXETG00000034657	XB5848842 [provisional] (ENSXETG00000026926)	rhag (ENSXETG00000011140)
Coelacanth	MODERN SPECIES	702												ENPP5 (ENSLACG00000015188)	ENPP4 (ENSLACG00000015052)	CLIC5 (ENSLACG00000014238)	RUNX2 (ENSLACG00000011545) #21	SUPT3H (ENSLACG00000003349) #22
Actinopterygii	ANCESTRAL SPECIES	159	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000154242.a	ENSGT00940000154323.b	ENSGT00940000161092	ENSGT00450000040279	ENSGT00390000014037	ENSGT00940000157818	ENSGT01070000253766.C	ENSGT00390000016168.a	ENSGT00940000159097	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01100000263524.D.c.a	ENSGT01100000263524.D.d	ENSGT00390000011892
Reedfish	MODERN SPECIES	11	ENSECRG00000004774	C8orf74 (ENSECRG00000004786)	sox7 (ENSECRG00000004795)	pinx1 (ENSECRG00000004802)	tdh (ENSECRG00000004812)	mtmr9 (ENSECRG00000004828)	xkr6b (ENSECRG00000004849)	ccm2 (ENSECRG00000004876)	ENSECRG00000004909	fam167aa (ENSECRG00000004917)	enpp5 (ENSECRG00000004922)	enpp4 (ENSECRG00000004928)	opn8a (ENSECRG00000004945)	CLIC5 (ENSECRG00000005045)	runx2a (ENSECRG00000005402) #21	supt3h (ENSECRG00000005415) #22	cdc5l (ENSECRG00000005435)	ENSECRG00000005466	mmut (ENSECRG00000005564)	ENSECRG00000005697	siah1 (ENSECRG00000005705)	ENSECRG00000005711	rap1aa (ENSECRG00000005733)	ENSECRG00000005755	ipo9 (ENSECRG00000005788)	kdm5ba (ENSECRG00000005836)	ENSECRG00000005859	rabif (ENSECRG00000005871)	KLHL12 (ENSECRG00000005881)	adipor1b (ENSECRG00000005891)	ENSECRG00000005904
Neopterygii	ANCESTRAL SPECIES	110	ENSGT00940000165962	ENSGT00940000154242.a	ENSGT00940000154323.b	ENSGT00940000161092	ENSGT00450000040279	ENSGT00390000014037	ENSGT00940000157818	ENSGT01070000253766.C	ENSGT00390000016168.a	ENSGT00940000159933	ENSGT00940000159097	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00990000203729	ENSGT00940000162287.A	ENSGT00940000161979.B	ENSGT01100000263524.D.d	ENSGT00390000011892	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a	ENSGT00520000055567.a.b	ENSGT00550000074694.b	ENSGT00940000158824
Spotted gar	MODERN SPECIES	647	ZNF512 (ENSLOCG00000015845)	ENSLOCG00000015843	ENSLOCG00000017991	scara5 (ENSLOCG00000015840)	pbk (ENSLOCG00000015839)	esco2 (ENSLOCG00000015834)	ENSLOCG00000015832	xkr6b (ENSLOCG00000015830)	ccm2 (ENSLOCG00000015826)	ENSLOCG00000015825	fam167aa (ENSLOCG00000015823)	enpp5 (ENSLOCG00000015821)	enpp4 (ENSLOCG00000015820)	clic5b (ENSLOCG00000015818)	runx2a (ENSLOCG00000015816) #21	supt3h (ENSLOCG00000015813) #22	cdc5l (ENSLOCG00000015811)	ENSLOCG00000015810	opn8a (ENSLOCG00000015809)	CNIH4 (ENSLOCG00000015807)	XDH (ENSLOCG00000015803)	ENSLOCG00000017990	parp1 (ENSLOCG00000015798)	lin9 (ENSLOCG00000015793)	acbd3 (ENSLOCG00000015790)	CCDC28A (ENSLOCG00000015788)	ECT2L (ENSLOCG00000015786)	NHSL1 (ENSLOCG00000015784)	hebp2 (ENSLOCG00000015783)	KIF25 (ENSLOCG00000015780)	GNPAT (ENSLOCG00000015770)
Osteoglossocephalai	ANCESTRAL SPECIES	95	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000165962	ENSGT00940000154242.a	ENSGT00940000161092	ENSGT00450000040279	ENSGT00390000014037	ENSGT00940000157818	ENSGT01070000253766.C	ENSGT00390000016168.a	ENSGT00940000159097	ENSGT00940000160562	ENSGT00940000158831	ENSGT00940000156406.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Osteoglossiformes	ANCESTRAL SPECIES	273		ENSGT00390000015191	ENSGT00940000160303.b	ENSGT00940000157269.a.a.f	ENSGT00940000158299.b	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000165962.f	ENSGT00940000154242.a	ENSGT00940000161092.f	ENSGT00940000159933.h	ENSGT00940000156406.b.b	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.b	ENSGT00390000005826.a.b.f	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Asian bonytongue	MODERN SPECIES	6	PTK2B (ENSSFOG00015016572)	chrna2a (ENSSFOG00015016535)	plaat1l (ENSSFOG00015016512)	ENSSFOG00015016481	ENSSFOG00015016163	ENSSFOG00015032782	ENSSFOG00015016083	ENSSFOG00015016063	ENSSFOG00015016040	SOX7 (ENSSFOG00015029357)	XKR6 (ENSSFOG00015016007)	ENSSFOG00015016000	fam167aa (ENSSFOG00015015994)	CLIC5 (ENSSFOG00015015979)	runx2a (ENSSFOG00015015956) #21	supt3h (ENSSFOG00015015906) #22	cdc5l (ENSSFOG00015015844)	KLHL29 (ENSSFOG00015015752)	TRIB2 (ENSSFOG00015030489)	ENSSFOG00015030185	MCM8 (ENSSFOG00015015633)	crls1 (ENSSFOG00015024669)	ENSSFOG00015015571	bmp2a (ENSSFOG00015015541)	hao1 (ENSSFOG00015015500)	tmx4 (ENSSFOG00015025717)	PLCB1 (ENSSFOG00015015419)	TPO (ENSSFOG00015015364)	sntg2 (ENSSFOG00015015327)	ENSSFOG00015015314	ENSSFOG00015015236
P. kingsleyae	MODERN SPECIES	34	TRERF1 (ENSPKIG00000014668)	PTK2B (ENSPKIG00000014835)	chrna2a (ENSPKIG00000014968)	plaat1l (ENSPKIG00000015014)	ZNF513 (ENSPKIG00000015051)	ENSPKIG00000015074	ENSPKIG00000015118	ENSPKIG00000015142	ENSPKIG00000015182	SOX7 (ENSPKIG00000015196)	XKR6 (ENSPKIG00000015213)	ENSPKIG00000015234	fam167aa (ENSPKIG00000015243)	CLIC5 (ENSPKIG00000015260)	runx2a (ENSPKIG00000015280) #21	supt3h (ENSPKIG00000015333) #22	cdc5l (ENSPKIG00000015398)	KLHL29 (ENSPKIG00000015471)	TRIB2 (ENSPKIG00000015534)	NAPB (ENSPKIG00000015563)	MCM8 (ENSPKIG00000015648)	crls1 (ENSPKIG00000015713)	gdf3 (ENSPKIG00000015729)	bmp2a (ENSPKIG00000015740)	hao1 (ENSPKIG00000015780)	tmx4 (ENSPKIG00000015835)	PLCB1 (ENSPKIG00000015928)	TPO (ENSPKIG00000016071)	sntg2 (ENSPKIG00000016120)	ENSPKIG00000016164	ENSPKIG00000016175
Clupeocephala	ANCESTRAL SPECIES	454															ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Euteleosteomorpha	ANCESTRAL SPECIES	346																ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b
Protacanthopterygii	ANCESTRAL SPECIES	92	ENSGT01030000234527.A.a.a.b.b	ENSGT00490000043329.a.b.g.b	ENSGT00390000002693	ENSGT00940000158032	ENSGT00390000016516	ENSGT00950000183117.b	ENSGT00940000164803.a	ENSGT00940000155566	ENSGT00390000012588	ENSGT00530000065281	ENSGT00950000183107.a.a	ENSGT01040000240523	ENSGT00940000160562	ENSGT00940000156406.b	ENSGT00940000156598.d	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b	ENSGT00940000168728	ENSGT01030000234613.b.a.b	ENSGT01030000234613.b.a.a.c.a	ENSGT00390000016478.f	ENSGT00940000154862.x.b	ENSGT01030000238132	ENSGT00950000182772.A.a.b.`b.a	ENSGT00940000154239.a
Salmoninae	ANCESTRAL SPECIES	338	ENSGT01100000263524.I	ENSGT00940000156946.k	ENSGT00940000156627.b.f	ENSGT00940000154340.A.f	ENSGT00940000164379.e.a	ENSGT00940000158205.o	ENSGT00940000154194.c.b.i	ENSGT00940000156665.b.a	ENSGT00390000005644.g	ENSGT00640000091487	ENSGT01070000253766.C.o.b.b	ENSGT00940000160562	ENSGT00940000156406.b	ENSGT00940000156406.a	ENSGT00940000156598.d	ENSGT00390000010738 #22	ENSGT00550000074922.l	ENSGT00390000005826.a.b.h.a.b	ENSGT00390000001607.i.b	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b.d
Salmoninae_a	ANCESTRAL SPECIES	36	ENSGT00940000160193.d	ENSGT00390000014316.c.a.b	ENSGT00390000008061	ENSGT01100000263524.I	ENSGT00940000156946.k	ENSGT00940000154340.A.f	ENSGT00940000164379.e.a	ENSGT00940000158205.o	ENSGT00940000154194.c.b.i	ENSGT00940000156665.b.a	ENSGT00390000005644.g	ENSGT00640000091487.p	ENSGT01070000253766.C.o.b.b	ENSGT00940000156406.a	ENSGT00940000156598.d	ENSGT00390000010738 #22	ENSGT00550000074922.l	ENSGT00390000005826.a.b.h.a.b	ENSGT01000000220171	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b.d	ENSGT00530000063867.a.b.n.b	ENSGT00940000180336	ENSGT00940000154902.tb.c.a	ENSGT00940000164834.a.a	ENSGT01030000234613.b.a.b.e	ENSGT01030000234613.b.a.a.c.a.n	ENSGT00390000016478.f.b	ENSGT00940000154862.x.b.i	ENSGT00950000182772.A.a.b.`b.a.i
Salmo	ANCESTRAL SPECIES	11	ENSGT00940000160193.d	ENSGT00390000014316.c.a.b	ENSGT00390000008061	ENSGT01100000263524.I	ENSGT00940000156946.k	ENSGT00940000154340.A.f	ENSGT00940000164379.e.a	ENSGT00940000158205.o	ENSGT00940000154194.c.b.i	ENSGT00940000156665.b.a	ENSGT00390000005644.g	ENSGT00640000091487.p	ENSGT01070000253766.C.o.b.b	ENSGT00940000156406.a	ENSGT00940000156598.d	ENSGT00390000010738 #22	ENSGT00550000074922.l	ENSGT00390000005826.a.b.h.a.b	ENSGT01000000220171	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b.d	ENSGT00530000063867.a.b.n.b	ENSGT00940000180336	ENSGT00940000154902.tb.c.a	ENSGT00940000164834.a.a	ENSGT01030000234613.b.a.b.e	ENSGT01030000234613.b.a.a.c.a.n	ENSGT00390000016478.f.b	ENSGT00940000154862.x.b.i	ENSGT00950000182772.A.a.b.`b.a.i
River trout	MODERN SPECIES	17	GABRG1 (ENSSTUG00000031505)	ENSSTUG00000031794	zgc:162509 (ENSSTUG00000032029)	rrh (ENSSTUG00000032055)	enpep (ENSSTUG00000032206)	ENSSTUG00000032941	ENSSTUG00000032946	metap1 (ENSSTUG00000032964)	eif4eb (ENSSTUG00000033197)	lingo2b (ENSSTUG00000033246)	zgc:100846 (ENSSTUG00000033254)	kiaa1109 (ENSSTUG00000033319)	ENSSTUG00000033421	clic5a (ENSSTUG00000033461)	ENSSTUG00000033503	supt3h (ENSSTUG00000033524) #22	cdc5l (ENSSTUG00000033559)	ENSSTUG00000033995	ENSSTUG00000034159	hao1 (ENSSTUG00000034183)	ENSSTUG00000034266	ENSSTUG00000034273	ENSSTUG00000034283	PLCB1 (ENSSTUG00000034334)	CDCA4 (ENSSTUG00000034767)	ENSSTUG00000034775	ENSSTUG00000034795	ENSSTUG00000034806	ENSSTUG00000034820	ENSSTUG00000034858	eif5 (ENSSTUG00000034892)
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000120753	ENSSSAG00000005225	rrh (ENSSSAG00000005205)	ENSSSAG00000004276	ENSSSAG00000114080	ENSSSAG00000004135	ENSSSAG00000120798	ampm1 (ENSSSAG00000004100)	eif4eb (ENSSSAG00000004062)	lingo2b (ENSSSAG00000093404)	zgc:100846 (ENSSSAG00000007620)	kiaa1109 (ENSSSAG00000002809)	ENSSSAG00000002612	clic5a (ENSSSAG00000002585)	ENSSSAG00000002568	ENSSSAG00000002562 #22	cdc5l (ENSSSAG00000002525)	ENSSSAG00000105039	ENSSSAG00000093293	ENSSSAG00000002416	ENSSSAG00000103947	ENSSSAG00000108826	ENSSSAG00000100817	ENSSSAG00000116630	ENSSSAG00000002298	ENSSSAG00000002276	EIF5 (ENSSSAG00000002230)	ckba (ENSSSAG00000070110)	MARK3 (ENSSSAG00000070224)	trm61 (ENSSSAG00000070099)	BAG5 (ENSSSAG00000121302)
Oncorhynchus	ANCESTRAL SPECIES	36	ENSGT00940000154245.B.b	ENSGT00940000157266.a.e	ENSGT00390000008061	ENSGT01100000263524.I	ENSGT00940000156946.k	ENSGT00940000154340.A.f	ENSGT00940000158205.o	ENSGT00940000154194.c.b.i	ENSGT00940000156665.b.a	ENSGT00390000005644.g	ENSGT00640000091487.p	ENSGT01070000253766.C.o.b.b	ENSGT00940000158831.h	ENSGT00940000156406.a	ENSGT00940000156598.d	ENSGT00390000010738 #22	ENSGT00550000074922.l	ENSGT00390000005826.a.b.h.a.b	ENSGT01000000220171	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b.d	ENSGT00530000063867.a.b.n.b	ENSGT00940000180336	ENSGT00940000154902.tb.c.a	ENSGT00940000164834.a.a	ENSGT01030000234613.b.a.b.e	ENSGT01030000234613.b.a.a.c.a.n	ENSGT00390000016478.f.b	ENSGT00940000154862.x.b.i	ENSGT00950000182772.A.a.b.`b.a.i
Oncorhynchus_a	DUPLICATION
Oncorhynchus_a	ANCESTRAL SPECIES	33	ENSGT00390000018121.s	ENSGT00940000154245.B.b	ENSGT00940000157266.a.e	ENSGT00390000008061	ENSGT01100000263524.I	ENSGT00940000156946.k	ENSGT00940000154340.A.f	ENSGT00940000158205.o	ENSGT00940000154194.c.b.i	ENSGT00940000156665.b.a	ENSGT00390000005644.g	ENSGT00640000091487.p	ENSGT01070000253766.C.o.b.b	ENSGT00940000156406.a	ENSGT00940000156598.d	ENSGT00390000010738.m #22	ENSGT00550000074922.l	ENSGT00390000005826.a.b.h.a.b	ENSGT01000000220171	ENSGT00390000018717.b.a.a	ENSGT00940000160301	ENSGT00940000155428.b.d	ENSGT00530000063867.a.b.n.b	ENSGT00940000154902.tb.c.a	ENSGT00390000016478.f.b	ENSGT00940000165332.B	ENSGT00940000164866.c	ENSGT00940000179359.a.b.a.b	ENSGT00940000156774.n.a	ENSGT00940000158220.bb	ENSGT00940000156982
Chinook salmon	MODERN SPECIES	2934	commd8 (ENSOTSG00005032151)	GABRB1 (ENSOTSG00005032152)	ENSOTSG00005032438	ENSOTSG00005033269	rrh (ENSOTSG00005033272)	enpep (ENSOTSG00005033277)	ENSOTSG00005033368	metap1 (ENSOTSG00005033369)	eif4eb (ENSOTSG00005033370)	lingo2b (ENSOTSG00005033381)	zgc:100846 (ENSOTSG00005033382)	ENSOTSG00005033464	XKR6 (ENSOTSG00005033469)	clic5a (ENSOTSG00005033471)	ENSOTSG00005033473	supt3h (ENSOTSG00005033498) #22	cdc5l (ENSOTSG00005033501)	napba (ENSOTSG00005033560)	ENSOTSG00005033581	hao1 (ENSOTSG00005033582)	ENSOTSG00005033590	PLCB1 (ENSOTSG00005033596)	CDCA4 (ENSOTSG00005034643)	ENSOTSG00005034644	ENSOTSG00005034646	ENSOTSG00005034647	eif5 (ENSOTSG00005034654)	mark3a (ENSOTSG00005034676)	ckba (ENSOTSG00005035955)	ENSOTSG00005035959	trmt61a (ENSOTSG00005035961)
Coho salmon	MODERN SPECIES	5	GABRB1 (ENSOKIG00005013514)	ENSOKIG00005013796	zgc:162509 (ENSOKIG00005014291)	rrh (ENSOKIG00005014295)	enpep (ENSOKIG00005014333)	ENSOKIG00005014578	ENSOKIG00005014588	METAP1 (ENSOKIG00005014606)	eif4eb (ENSOKIG00005014694)	lingo2b (ENSOKIG00005014959)	zgc:100846 (ENSOKIG00005014971)	kiaa1109 (ENSOKIG00005015003)	XKR6 (ENSOKIG00005015064)	clic5a (ENSOKIG00005015076)	ENSOKIG00005015106	supt3h (ENSOKIG00005015131) #22	cdc5l (ENSOKIG00005015194)	napba (ENSOKIG00005015345)	ENSOKIG00005015424	hao1 (ENSOKIG00005015450)	ENSOKIG00005015510	PLCB1 (ENSOKIG00005015567)	ENSOKIG00005015993	CDCA4 (ENSOKIG00005015998)	ENSOKIG00005016003	ENSOKIG00005016011	ENSOKIG00005016015	ENSOKIG00005016037	ENSOKIG00005016057	EIF5 (ENSOKIG00005016088)	mark3a (ENSOKIG00005016189)
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00390000010738.n #22
Chinook salmon	MODERN SPECIES	42	commd8 (ENSOTSG00005045574)	GABRB1 (ENSOTSG00005045575)	ENSOTSG00005045655	ENSOTSG00005045854	rrh (ENSOTSG00005045855)	enpep (ENSOTSG00005036547)	ENSOTSG00005036704	metap1 (ENSOTSG00005036708)	eif4eb (ENSOTSG00005036722)	lingo2b (ENSOTSG00005036724)	zgc:100846 (ENSOTSG00005036725)	ENSOTSG00005036733	ENSOTSG00005036776	clic5a (ENSOTSG00005036779)	ENSOTSG00005036780	supt3h (ENSOTSG00005036806) #22	cdc5l (ENSOTSG00005036846)	ENSOTSG00005036879	ENSOTSG00005037004	hao1 (ENSOTSG00005037005)	ENSOTSG00005037006	PLCB1 (ENSOTSG00005037010)	CDCA4 (ENSOTSG00005037683)	ENSOTSG00005037684	ENSOTSG00005037685	ENSOTSG00005037689	mark3a (ENSOTSG00005037697)	ckba (ENSOTSG00005039214)	ENSOTSG00005039219	trmt61a (ENSOTSG00005039223)	bag5 (ENSOTSG00005039229)
Rainbow trout	MODERN SPECIES	17	ENSOMYG00000076741	ENSOMYG00000033407	ENSOMYG00000033389	ENSOMYG00000033258	ENSOMYG00000033099	ENSOMYG00000033094	ENSOMYG00000033064	eif4eb (ENSOMYG00000032997)	lingo2b (ENSOMYG00000032911)	zgc:100846 (ENSOMYG00000032892)	kiaa1109 (ENSOMYG00000032599)	ENSOMYG00000032468	ENSOMYG00000032451	clic5a (ENSOMYG00000032427)	ENSOMYG00000061433	ENSOMYG00000032357 #22	cdc5l (ENSOMYG00000030797)	ENSOMYG00000047855	ENSOMYG00000059970	hao1 (ENSOMYG00000033541)	ENSOMYG00000033526	PLCB1 (ENSOMYG00000033338)	ENSOMYG00000055460	ENSOMYG00000051000	ENSOMYG00000033086	ENSOMYG00000033078	ENSOMYG00000048291	ENSOMYG00000033053	ENSOMYG00000033025	if5 (ENSOMYG00000032972)	mark3a (ENSOMYG00000032737)
Huchen	MODERN SPECIES	1814											eif4eb (ENSHHUG00000013814)	zgc:100846 (ENSHHUG00000013885)	ENSHHUG00000013964	ENSHHUG00000014103	ENSHHUG00000014107	supt3h (ENSHHUG00000014114) #22	cdc5l (ENSHHUG00000014127)	NAPB (ENSHHUG00000014192)	ENSHHUG00000014218	hao1 (ENSHHUG00000014237)	ENSHHUG00000014292
Northern pike	MODERN SPECIES	14	ENSELUG00000014192	rrh (ENSELUG00000000517)	enpep (ENSELUG00000014126)	lrit3b (ENSELUG00000014030)	fam241a (ENSELUG00000025082)	adh8a (ENSELUG00000014009)	metap1 (ENSELUG00000013989)	eif4eb (ENSELUG00000013924)	lingo2b (ENSELUG00000013895)	zgc:100846 (ENSELUG00000013873)	kiaa1109 (ENSELUG00000013765)	XKR6 (ENSELUG00000013632)	enpp4 (ENSELUG00000013626)	clic5a (ENSELUG00000013608)	ENSELUG00000013580	supt3h (ENSELUG00000013548) #22	cdc5l (ENSELUG00000013492)	napba (ENSELUG00000013424)	MCM8 (ENSELUG00000013379)	crls1 (ENSELUG00000013306)	hao1 (ENSELUG00000013296)	tmx4 (ENSELUG00000013273)	PLCB1 (ENSELUG00000013241)	CDCA4 (ENSELUG00000013163)	ENSELUG00000034002	exoc3l4 (ENSELUG00000013122)	ENSELUG00000013091	eif5 (ENSELUG00000013021)	mark3a (ENSELUG00000012906)	ENSELUG00000032851	ckb (ENSELUG00000000464)
Acanthomorphata	ANCESTRAL SPECIES	246								ENSGT00390000003874.a.b	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a
Euacanthomorphacea	ANCESTRAL SPECIES	77	ENSGT00940000160909.e	ENSGT00940000156472.c	ENSGT00390000016619.a	ENSGT00940000160192	ENSGT00940000155850	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a
Percomorphaceae	ANCESTRAL SPECIES	90	ENSGT00940000160909.e	ENSGT00940000156472.c	ENSGT01050000245335	ENSGT00390000016619.a	ENSGT00940000160192	ENSGT00940000155850	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a
Tiger tail seahorse	MODERN SPECIES	512	ldb3a (ENSHCOG00000020149)	SNCG (ENSHCOG00000020177)	ENSHCOG00000020190	rbm45 (ENSHCOG00000000850)	zc3h15 (ENSHCOG00000020225)	dusp19b (ENSHCOG00000020237)	ENSHCOG00000020241	nckap1 (ENSHCOG00000020297)	ENSHCOG00000020308	pdxkb (ENSHCOG00000020338)	ITSN1 (ENSHCOG00000020398)	cryzl1 (ENSHCOG00000020475)	setd4 (ENSHCOG00000020499)	gja5b (ENSHCOG00000020520)	ENSHCOG00000020532	ENSHCOG00000020559 #22	cdc5l (ENSHCOG00000020596)	ENSHCOG00000020609	ENSHCOG00000020675	crls1 (ENSHCOG00000020688)	MCM8 (ENSHCOG00000020721)	DDIT4 (ENSHCOG00000020730)	dnajb12a (ENSHCOG00000020755)	trmt2b (ENSHCOG00000020832)	ENSHCOG00000020875	ENSHCOG00000020885	SRBD1 (ENSHCOG00000020894)	ENSHCOG00000020901	six2a (ENSHCOG00000020914)	six3a (ENSHCOG00000020926)	CAMKMT (ENSHCOG00000020953)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Cyprinodontiformes	ANCESTRAL SPECIES	44	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
Aplocheiloidei	ANCESTRAL SPECIES	22	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00390000004284.e	ENSGT00940000156530.c.`b.b	ENSGT00390000018052	ENSGT00950000183091.A.b	ENSGT00390000015405	ENSGT00390000009597.c	ENSGT00940000156327.l
Mangrove rivulus	MODERN SPECIES	108										zc3h15 (ENSKMAG00000007580)	rbm45 (ENSKMAG00000007636)	ENSKMAG00000007665	gja5b (ENSKMAG00000007678)	ENSKMAG00000007722	ENSKMAG00000007809	supt3h (ENSKMAG00000007830) #22	cdc5l (ENSKMAG00000007868)	ENSKMAG00000007938	GRIN2A (ENSKMAG00000008004)	ENSKMAG00000008104	ENSKMAG00000008266	b9d1 (ENSKMAG00000008279)	EPN2 (ENSKMAG00000008328)	grapa (ENSKMAG00000008405)	ENSKMAG00000008438	SPHK1 (ENSKMAG00000008454)	ENSKMAG00000008475	ENSKMAG00000008544	CYGB (ENSKMAG00000008562)	PRPSAP1 (ENSKMAG00000008582)	ENSKMAG00000008642
Turquoise killifish	MODERN SPECIES	1612	SETD4 (ENSNFUG00015014916)	cryzl1 (ENSNFUG00015014898)	ITSN1 (ENSNFUG00015013234)	pdxkb (ENSNFUG00015013029)	KLHL10 (ENSNFUG00015012980)	ENSNFUG00015012973	ENSNFUG00015012969	ENSNFUG00015012965	ENSNFUG00015012963	ENSNFUG00015012959	ZC3H15 (ENSNFUG00015012956)	rbm45 (ENSNFUG00015012894)	CYCSB (ENSNFUG00015012877)	ENSNFUG00015012638	ENSNFUG00015012619	SUPT3H (ENSNFUG00015012610) #22	CDC5L (ENSNFUG00015012572)	ENSNFUG00015010315	CRLS1 (ENSNFUG00015010205)	MCM8 (ENSNFUG00015009853)	ENSNFUG00015009843	ENSNFUG00015009834	ENSNFUG00015009797	ENSNFUG00015009790	ENSNFUG00015009783	ENSNFUG00015009778	cdh11 (ENSNFUG00015009107)	ENSNFUG00015008958	ENSNFUG00015008948	CHRNA1 (ENSNFUG00015024488)	LNPB (ENSNFUG00015024477)
Cyprinodontoidei	ANCESTRAL SPECIES	56	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
Poeciliinae	ANCESTRAL SPECIES	46	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
Poecilia	ANCESTRAL SPECIES	85	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
NAME_6	ANCESTRAL SPECIES	365															ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
Sailfin molly	MODERN SPECIES	1119															ENSPLAG00000001940	supt3h (ENSPLAG00000001949) #22	cdc5l (ENSPLAG00000001970)	ENSPLAG00000002005	ENSPLAG00000002035	ENSPLAG00000002071	crls1 (ENSPLAG00000002078)	MCM8 (ENSPLAG00000002113)
Amazon molly	MODERN SPECIES	501															ENSPFOG00000013752	supt3h (ENSPFOG00000013723) #22	cdc5l (ENSPFOG00000013630)	ENSPFOG00000013627	ENSPFOG00000013525	crls1 (ENSPFOG00000024600)	MCM8 (ENSPFOG00000013447)	ENSPFOG00000013443	ENSPFOG00000013441	ENSPFOG00000013432	ENSPFOG00000013430	cdh11 (ENSPFOG00000013159)	chrna1 (ENSPFOG00000013052)	LNPK (ENSPFOG00000012939)
Guppy	MODERN SPECIES	445	setd4 (ENSPREG00000005641)	cryzl1 (ENSPREG00000005598)	ITSN1 (ENSPREG00000005192)	ENSPREG00000004927	pdxkb (ENSPREG00000004876)	KLHL10 (ENSPREG00000004855)	ENSPREG00000004843	ENSPREG00000004817	nckap1 (ENSPREG00000004708)	dusp19b (ENSPREG00000004664)	zc3h15 (ENSPREG00000004618)	rbm45 (ENSPREG00000004579)	ENSPREG00000004564	ENSPREG00000004536	ENSPREG00000004514	supt3h (ENSPREG00000004499) #22	cdc5l (ENSPREG00000004453)	NAPB (ENSPREG00000004413)	ENSPREG00000004223	crls1 (ENSPREG00000004163)	MCM8 (ENSPREG00000004107)	ENSPREG00000004084	ENSPREG00000004062	cdh11 (ENSPREG00000004035)	ENSPREG00000004017	chrna1 (ENSPREG00000003974)	ENSPREG00000003952	ENSPREG00000003913	ENSPREG00000003880	hint1 (ENSPREG00000003867)	lyrm7 (ENSPREG00000003834)
Platyfish	MODERN SPECIES	14	setd4 (ENSXMAG00000013588)	cryzl1 (ENSXMAG00000027307)	ITSN1 (ENSXMAG00000013547)	pdxkb (ENSXMAG00000003658)	KLHL10 (ENSXMAG00000003674)	ENSXMAG00000003677	ENSXMAG00000013545	nckap1 (ENSXMAG00000013512)	DUSP19 (ENSXMAG00000013508)	ENSXMAG00000025517	zc3h15 (ENSXMAG00000000989)	rbm45 (ENSXMAG00000026302)	ENSXMAG00000026157	gja5b (ENSXMAG00000000963)	ENSXMAG00000006715	supt3h (ENSXMAG00000006720) #22	cdc5l (ENSXMAG00000006816)	ENSXMAG00000007042	ENSXMAG00000007152	crls1 (ENSXMAG00000024193)	MCM8 (ENSXMAG00000014286)	ENSXMAG00000027326	cdh11 (ENSXMAG00000001660)	chrna1 (ENSXMAG00000001627)	LNPK (ENSXMAG00000026819)	ENSXMAG00000024442	ENSXMAG00000026075	FAM98A (ENSXMAG00000016010)	ENSXMAG00000026008	ENSXMAG00000008216	ENSXMAG00000011795
NAME_4	ANCESTRAL SPECIES	158	ENSGT00390000013113	ENSGT00940000157065	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000181330	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b.o	ENSGT00940000155428.b.p	ENSGT00390000001607	ENSGT01090000260080.a
Mummichog	MODERN SPECIES	2306	setd4 (ENSFHEG00000012316)	cryzl1 (ENSFHEG00000012340)	ITSN1 (ENSFHEG00000012460)	pdxkb (ENSFHEG00000012502)	KLHL10 (ENSFHEG00000012514)	ENSFHEG00000012527	ppp1r1c (ENSFHEG00000012542)	nckap1 (ENSFHEG00000012740)	ENSFHEG00000012764	zc3h15 (ENSFHEG00000012799)	rbm45 (ENSFHEG00000012844)	ENSFHEG00000012852	gja5b (ENSFHEG00000012899)	ENSFHEG00000012914	ENSFHEG00000012938	supt3h (ENSFHEG00000012987) #22	cdc5l (ENSFHEG00000013091)	NAPB (ENSFHEG00000013149)	ENSFHEG00000013182	ENSFHEG00000013215	crls1 (ENSFHEG00000013230)	MCM8 (ENSFHEG00000013275)
Sheepshead minnow	MODERN SPECIES	982										sri (ENSCVAG00000014572)	NXPE3 (ENSCVAG00000014583)	NXPE3 (ENSCVAG00000000373)	ENSCVAG00000014633	ENSCVAG00000014743	ENSCVAG00000014768	supt3h (ENSCVAG00000014780) #22	cdc5l (ENSCVAG00000014810)	ENSCVAG00000014850
Oryzias	ANCESTRAL SPECIES	6	ENSGT00390000017259	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000014293.b	ENSGT00510000047589	ENSGT00940000153335.a.b	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b	ENSGT00390000015849	ENSGT00390000007683	ENSGT00990000204611.d	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000154866.B.a	ENSGT00940000154200.A.b
Oryzias_b	ANCESTRAL SPECIES	49		ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00990000204944	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000014293.b	ENSGT00510000047589	ENSGT00940000153335.a.b	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b	ENSGT00390000015849	ENSGT00440000037341.a	ENSGT00390000007683	ENSGT00990000204611.d	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000154866.B.a	ENSGT00940000154200.A.b
Indian medaka	MODERN SPECIES	161	aprt (ENSOMEG00000016286)	ITSN1 (ENSOMEG00000016257)	ENSOMEG00000016224	pdxkb (ENSOMEG00000016206)	ENSOMEG00000016189	ENSOMEG00000016183	nckap1 (ENSOMEG00000016161)	dusp19b (ENSOMEG00000015994)	ENSOMEG00000015976	ENSOMEG00000015952	zc3h15 (ENSOMEG00000015919)	rbm45 (ENSOMEG00000015870)	ENSOMEG00000015793	gja5b (ENSOMEG00000015702)	ENSOMEG00000015688	supt3h (ENSOMEG00000015675) #22	cdc5l (ENSOMEG00000015638)	ENSOMEG00000015602
Javanese ricefish	MODERN SPECIES	6								ENSOJAG00000012062	dusp19b (ENSOJAG00000013626)	ENSOJAG00000013639	zc3h15 (ENSOJAG00000013654)	rbm45 (ENSOJAG00000013675)	ENSOJAG00000013682	gja5b (ENSOJAG00000013692)	ENSOJAG00000013713	supt3h (ENSOJAG00000013756) #22	NAPB (ENSOJAG00000014463)	ENSOJAG00000014748	ENSOJAG00000014870	galm (ENSOJAG00000014885)	cdk1 (ENSOJAG00000014894)	RNF166 (ENSOJAG00000015079)	cyp17a1 (ENSOJAG00000015115)	borcs7 (ENSOJAG00000015301)	FAM98A (ENSOJAG00000015321)	chchd1 (ENSOJAG00000015509)	ENSOJAG00000015517	SLC24A3 (ENSOJAG00000015537)	RIN2 (ENSOJAG00000015841)	ENSOJAG00000015870	pcca (ENSOJAG00000015899)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000017259	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b.a	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000014293.b	ENSGT00510000047589	ENSGT00940000153335.a.b	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b	ENSGT00390000015849	ENSGT00940000167863	ENSGT00390000007683	ENSGT00990000204611.d	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000154866.B.a
Chinese medaka	MODERN SPECIES	1329						ENSOSIG00000011586	nckap1 (ENSOSIG00000011434)	dusp19b (ENSOSIG00000011430)	ENSOSIG00000011427	ENSOSIG00000011426	ENSOSIG00000011424	zc3h15 (ENSOSIG00000011420)	rbm45 (ENSOSIG00000011418)	ENSOSIG00000011403	ENSOSIG00000011401	supt3h (ENSOSIG00000011398) #22	ENSOSIG00000011388	ENSOSIG00000010004	ENSOSIG00000009995	galm (ENSOSIG00000009988)	cdk1 (ENSOSIG00000009985)	ctu2 (ENSOSIG00000009930)	RNF166 (ENSOSIG00000009927)	cyp17a1 (ENSOSIG00000009662)	borcs7 (ENSOSIG00000009658)	ENSOSIG00000009656	ENSOSIG00000009426	RIN2 (ENSOSIG00000009424)	ENSOSIG00000009423	pcca (ENSOSIG00000009007)	PIEZO1 (ENSOSIG00000008364)
Japanese Medaka HdrR	MODERN SPECIES	6	aprt (ENSORLG00000021991)	cryzl1 (ENSORLG00000020524)	ENSORLG00000011152	ENSORLG00000023954	ENSORLG00000030643	pdxkb (ENSORLG00000030476)	ENSORLG00000027990	nckap1 (ENSORLG00000019526)	dusp19b (ENSORLG00000030562)	ENSORLG00000030639	zc3h15 (ENSORLG00000018606)	rbm45 (ENSORLG00000024508)	ENSORLG00000018577	ENSORLG00000024876	ENSORLG00000018584	supt3h (ENSORLG00000018724) #22	cdc5l (ENSORLG00000018576)	NAPB (ENSORLG00000022327)	ENSORLG00000029381	ENSORLG00000019183	galm (ENSORLG00000019248)	cdk1 (ENSORLG00000019266)	ctu2 (ENSORLG00000027844)	RNF166 (ENSORLG00000019278)	cyp17 (ENSORLG00000019226)	borcs7 (ENSORLG00000025880)	ENSORLG00000028435	chchd1 (ENSORLG00000025269)	ENSORLG00000029766	ENSORLG00000000303	ENSORLG00000000322
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00990000204944	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922.i	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Nile tilapia	MODERN SPECIES	4	zc3h15 (ENSONIG00000001456)	ENSONIG00000029343	ENSONIG00000037289	rbm45 (ENSONIG00000001450)	ENSONIG00000032877	ENSONIG00000035800	ENSONIG00000029401	ENSONIG00000041422	ENSONIG00000038094	ENSONIG00000030066	ENSONIG00000036800	ENSONIG00000034775	gja5b (ENSONIG00000001440)	ENSONIG00000001437	ENSONIG00000001436	supt3h (ENSONIG00000027778) #22	cdc5l (ENSONIG00000001420)	ENSONIG00000001413	ENSONIG00000001391	crls1 (ENSONIG00000032438)	MCM8 (ENSONIG00000001379)	ENSONIG00000040828	ENSONIG00000037754	ENSONIG00000043154	cdh11 (ENSONIG00000001364)	chrna1 (ENSONIG00000001353)	ENSONIG00000001346	ENSONIG00000036413	ENSONIG00000039782	mtx2 (ENSONIG00000001332)	cdh5 (ENSONIG00000001324)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922.i	ENSGT00550000074922.j	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000154664.h.m.b.c	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d.a	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922.i	ENSGT00550000074922.j	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000178688	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000154664.h.m.b.d	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d.a	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922.i	ENSGT00550000074922.j	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000178688	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a.d	ENSGT00940000154664.h.m.b.d	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d.a	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922.i	ENSGT00550000074922.j	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000178688	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005027276	cox20 (ENSMZEG00005027277)	lhb (ENSMZEG00005027278)	ENSMZEG00005027288	ENSMZEG00005027289	ENSMZEG00005027290	nckap1 (ENSMZEG00005027291)	dusp19b (ENSMZEG00005027292)	ENSMZEG00005027293	zc3h15 (ENSMZEG00005027294)	rbm45 (ENSMZEG00005027295)	ENSMZEG00005027296	gja5b (ENSMZEG00005027297)	ENSMZEG00005027298	ENSMZEG00005027299	supt3h (ENSMZEG00005027300) #22	cdc5l (ENSMZEG00005027301)	ENSMZEG00005027302	ENSMZEG00005027303	ENSMZEG00005027304	crls1 (ENSMZEG00005027305)	MCM8 (ENSMZEG00005027306)	ENSMZEG00005027307	ENSMZEG00005027308	ENSMZEG00005027310	cdh11 (ENSMZEG00005027311)	chrna1 (ENSMZEG00005027312)	ENSMZEG00005027313	ENSMZEG00005027314	ENSMZEG00005027316	mtx2 (ENSMZEG00005027317)
Eastern happy	MODERN SPECIES	4	ENSACLG00000027405	ENSACLG00000027398	nckap1 (ENSACLG00000027324)	DUSP19 (ENSACLG00000027315)	ENSACLG00000027307	rbm45 (ENSACLG00000027286)	ENSACLG00000027279	gja5b (ENSACLG00000027265)	ENSACLG00000027233	zc3h15 (ENSACLG00000027219)	rbm45 (ENSACLG00000027201)	ENSACLG00000027193	gja5b (ENSACLG00000027184)	ENSACLG00000027168	ENSACLG00000027163	supt3h (ENSACLG00000027134) #22	cdc5l (ENSACLG00000027113)	ENSACLG00000027106	NAPB (ENSACLG00000027092)	ENSACLG00000027077	crls1 (ENSACLG00000027066)	MCM8 (ENSACLG00000027032)	ENSACLG00000027021	cdh11 (ENSACLG00000026983)	chrna1 (ENSACLG00000026947)	ENSACLG00000026928	ENSACLG00000026925	ENSACLG00000026918	mtx2 (ENSACLG00000026900)	cdh5 (ENSACLG00000026891)	ENSACLG00000026887
P. nyererei	MODERN SPECIES	406	epas1b (ENSPNYG00000011765)	ENSPNYG00000011728	ENSPNYG00000011717	ENSPNYG00000011698	lhb (ENSPNYG00000011106)	KLHL10 (ENSPNYG00000010961)	plekha3 (ENSPNYG00000010949)	ENSPNYG00000010932	nckap1 (ENSPNYG00000010839)	dusp19b (ENSPNYG00000010801)	zc3h15 (ENSPNYG00000010768)	rbm45 (ENSPNYG00000010755)	gja5b (ENSPNYG00000010735)	ENSPNYG00000010563	ENSPNYG00000010487	supt3h (ENSPNYG00000010429) #22
Burton s mouthbrooder	MODERN SPECIES	318														ENSHBUG00000016888	ENSHBUG00000016910	supt3h (ENSHBUG00000017002) #22	cdc5l (ENSHBUG00000017304)	ENSHBUG00000017367	ENSHBUG00000017385	crls1 (ENSHBUG00000017404)	MCM8 (ENSHBUG00000017500)	ENSHBUG00000017517	cdh11 (ENSHBUG00000017576)	chrna1 (ENSHBUG00000017612)	ENSHBUG00000017633	ENSHBUG00000017648	ENSHBUG00000017792	mtx2 (ENSHBUG00000017811)	cdh5 (ENSHBUG00000017838)	ENSHBUG00000017845	tmem41ab (ENSHBUG00000017882)
Lyretail cichlid	MODERN SPECIES	295	ENSNBRG00000008388	ENSNBRG00000008415	ENSNBRG00000008422	ENSNBRG00000008435	KLHL10 (ENSNBRG00000008454)	ENSNBRG00000008486	nckap1 (ENSNBRG00000008544)	ENSNBRG00000008703	zc3h15 (ENSNBRG00000008737)	rbm45 (ENSNBRG00000008816)	ENSNBRG00000008839	ENSNBRG00000008849	gja5b (ENSNBRG00000008861)	ENSNBRG00000008911	ENSNBRG00000009005	ENSNBRG00000009039 #22	cdc5l (ENSNBRG00000009082)	ENSNBRG00000009123	ENSNBRG00000009141	crls1 (ENSNBRG00000009160)	MCM8 (ENSNBRG00000009201)	cdh11 (ENSNBRG00000009299)	chrna1 (ENSNBRG00000009347)	ENSNBRG00000009387	ENSNBRG00000009407	ENSNBRG00000009484	mtx2 (ENSNBRG00000009500)	cdh5 (ENSNBRG00000009513)	ENSNBRG00000009525	tmem41ab (ENSNBRG00000009547)	ENSNBRG00000009564
Pomacentridae	ANCESTRAL SPECIES	149						ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226
Pomacentridae_A	ANCESTRAL SPECIES	177						ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f
Amphiprion	ANCESTRAL SPECIES	193						ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00390000004582	ENSGT01050000244965.a.b
Orange clownfish	MODERN SPECIES	12	ENSAPEG00000013899	ENSAPEG00000013912	kif11 (ENSAPEG00000013934)	EGR2 (ENSAPEG00000014037)	adob (ENSAPEG00000014044)	plekha3 (ENSAPEG00000014055)	ppp1r1c (ENSAPEG00000014078)	nckap1 (ENSAPEG00000014107)	dusp19b (ENSAPEG00000014254)	zc3h15 (ENSAPEG00000014281)	rbm45 (ENSAPEG00000014352)	ENSAPEG00000014419	gja5b (ENSAPEG00000014426)	ENSAPEG00000014444	ENSAPEG00000014655	supt3h (ENSAPEG00000014690) #22	cdc5l (ENSAPEG00000014728)	ENSAPEG00000014802	ENSAPEG00000014856	ENSAPEG00000014906	ENSAPEG00000014930	crls1 (ENSAPEG00000014963)	MCM8 (ENSAPEG00000015007)	ENSAPEG00000015097	ENSAPEG00000015135	cdh11 (ENSAPEG00000015173)	chrna1 (ENSAPEG00000015224)	ENSAPEG00000015266	AIFM2 (ENSAPEG00000015281)	elovl6l (ENSAPEG00000015312)	ENSAPEG00000015392
Clown anemonefish	MODERN SPECIES	514															ENSAOCG00000013025	supt3h (ENSAOCG00000002657) #22
Spiny chromis	MODERN SPECIES	1204														ENSAPOG00000009657	ENSAPOG00000009684	supt3h (ENSAPOG00000009723) #22	cdc5l (ENSAPOG00000009828)	ENSAPOG00000009887	ENSAPOG00000009910	crls1 (ENSAPOG00000009930)	MCM8 (ENSAPOG00000010011)
Bicolor damselfish	MODERN SPECIES	1719										zc3h15 (ENSSPAG00000023191)	rbm45 (ENSSPAG00000023188)	ENSSPAG00000023186	gja5b (ENSSPAG00000023184)	ENSSPAG00000023179	ENSSPAG00000023177	supt3h (ENSSPAG00000023171) #22	cdc5l (ENSSPAG00000023162)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Tetraodon	MODERN SPECIES	9	GFRA1 (ENSTNIG00000009869)	ENSTNIG00000009868	PRKCE (ENSTNIG00000009867)	epas1b (ENSTNIG00000009866)	SLC22A7 (ENSTNIG00000009865)	ENSTNIG00000009864	ENSTNIG00000009863	lhb (ENSTNIG00000009862)	nckap1 (ENSTNIG00000009861)	zc3h15 (ENSTNIG00000009860)	rbm45 (ENSTNIG00000009859)	ENSTNIG00000009858	gja5b (ENSTNIG00000009857)	ENSTNIG00000009856	ENSTNIG00000009855	supt3h (ENSTNIG00000009854) #22	cdc5l (ENSTNIG00000009853)	napba (ENSTNIG00000001455)	ENSTNIG00000009852	crls1 (ENSTNIG00000009851)	MCM8 (ENSTNIG00000009850)	cdh11 (ENSTNIG00000009849)	chrna1 (ENSTNIG00000009848)	ENSTNIG00000001782	ENSTNIG00000001779	ENSTNIG00000001778	mtx2 (ENSTNIG00000009847)	ENSTNIG00000009846	ENSTNIG00000009845	ciao2b (ENSTNIG00000009844)	b3gnt2b (ENSTNIG00000009843)
Fugu	MODERN SPECIES	16	epas1b (ENSTRUG00000005627)	SLC22A7 (ENSTRUG00000006391)	ENSTRUG00000031756	cox20 (ENSTRUG00000019810)	lhb (ENSTRUG00000003328)	ENSTRUG00000030705	nckap1 (ENSTRUG00000003647)	dusp19b (ENSTRUG00000025535)	ENSTRUG00000030418	zc3h15 (ENSTRUG00000004988)	rbm45 (ENSTRUG00000005485)	ENSTRUG00000028715	gja5b (ENSTRUG00000021114)	ENSTRUG00000006066	frrunt (ENSTRUG00000006274)	supt3h (ENSTRUG00000006325) #22	cdc5l (ENSTRUG00000006648)	napba (ENSTRUG00000007062)	ENSTRUG00000031613	crls1 (ENSTRUG00000032586)	MCM8 (ENSTRUG00000007887)	ENSTRUG00000031166	ENSTRUG00000033269	cdh11 (ENSTRUG00000008151)	chrna1 (ENSTRUG00000008738)	ENSTRUG00000009272	ENSTRUG00000032802	ENSTRUG00000030881	hoxd4b (ENSTRUG00000028105)	mtx2 (ENSTRUG00000009663)	cdh5 (ENSTRUG00000009855)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d	ENSGT00910000144296
Lumpfish	MODERN SPECIES	6	ENSCLMG00005009705	mtx2 (ENSCLMG00005009708)	ENSCLMG00005009724	ENSCLMG00005009732	ENSCLMG00005009733	ENSCLMG00005009736	ENSCLMG00005009737	nckap1 (ENSCLMG00005009751)	dusp19b (ENSCLMG00005009996)	zc3h15 (ENSCLMG00005009997)	rbm45 (ENSCLMG00005010004)	ENSCLMG00005010009	ENSCLMG00005010015	ENSCLMG00005004335	ENSCLMG00005004391	ENSCLMG00005004471 #22	cdc5l (ENSCLMG00005004550)	ENSCLMG00005004620	ENSCLMG00005004686	ENSCLMG00005004698	ENSCLMG00005004708	crls1 (ENSCLMG00005004717)	MCM8 (ENSCLMG00005004786)	cdh11 (ENSCLMG00005005766)	chrna1 (ENSCLMG00005005769)	pdxkb (ENSCLMG00005005772)	ENSCLMG00005005773	ITSN1 (ENSCLMG00005005801)	cryzl1 (ENSCLMG00005007429)	setd4 (ENSCLMG00005007430)	cbr1 (ENSCLMG00005007431)
Stickleback	MODERN SPECIES	6	ENSGACG00000011571	rtn4a (ENSGACG00000011574)	EML6 (ENSGACG00000011586)	ENSGACG00000011609	pdxkb (ENSGACG00000011614)	plekha3 (ENSGACG00000011619)	ENSGACG00000011623	nckap1 (ENSGACG00000011628)	dusp19b (ENSGACG00000011638)	zc3h15 (ENSGACG00000011648)	rbm45 (ENSGACG00000011659)	ENSGACG00000011687	gja5b (ENSGACG00000011699)	ENSGACG00000011701	ENSGACG00000011721	supt3h (ENSGACG00000011726) #22	cdc5l (ENSGACG00000011733)	napba (ENSGACG00000011818)	ENSGACG00000011822	crls1 (ENSGACG00000011832)	MCM8 (ENSGACG00000011835)	cdh11 (ENSGACG00000011843)	chrna1 (ENSGACG00000011894)	ENSGACG00000011901	ENSGACG00000011902	ENSGACG00000011907	mtx2 (ENSGACG00000011909)	ENSGACG00000011926	ENSGACG00000011928	tmem41ab (ENSGACG00000011933)	GPR155 (ENSGACG00000011939)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00990000204944	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Pike perch	MODERN SPECIES	30	pdxkb (ENSSLUG00000013510)	KLHL10 (ENSSLUG00000013557)	ENSSLUG00000013560	ENSSLUG00000013565	nckap1 (ENSSLUG00000013597)	dusp19b (ENSSLUG00000013812)	ENSSLUG00000013817	ENSSLUG00000013821	zc3h15 (ENSSLUG00000013824)	rbm45 (ENSSLUG00000013836)	ENSSLUG00000013859	gja5b (ENSSLUG00000013884)	ENSSLUG00000013899	ENSSLUG00000013945	ENSSLUG00000013950	supt3h (ENSSLUG00000013970) #22	cdc5l (ENSSLUG00000014019)	napba (ENSSLUG00000014126)	ENSSLUG00000014210	crls1 (ENSSLUG00000014253)	MCM8 (ENSSLUG00000014337)	ENSSLUG00000015130	cdh11 (ENSSLUG00000015183)	ENSSLUG00000016421	chrna1 (ENSSLUG00000016431)	ENSSLUG00000016476	ENSSLUG00000016498	mtx2 (ENSSLUG00000016529)	cdh5 (ENSSLUG00000016548)	ENSSLUG00000016553	tmem41ab (ENSSLUG00000016558)
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Gilthead seabream	MODERN SPECIES	6	setd4 (ENSSAUG00010016734)	cryzl1 (ENSSAUG00010016714)	ITSN1 (ENSSAUG00010012140)	ENSSAUG00010012045	ENSSAUG00010012011	ENSSAUG00010012009	ENSSAUG00010012008	nckap1 (ENSSAUG00010011973)	dusp19b (ENSSAUG00010011962)	ENSSAUG00010011960	rbm45 (ENSSAUG00010011956)	ENSSAUG00010011950	gja5b (ENSSAUG00010011946)	ENSSAUG00010011943	ENSSAUG00010011940	ENSSAUG00010011926 #22	cdc5l (ENSSAUG00010011912)	ENSSAUG00010011829	zc3h15 (ENSSAUG00010011819)	ENSSAUG00010009227	crls1 (ENSSAUG00010009153)	MCM8 (ENSSAUG00010008300)	cdh11 (ENSSAUG00010005288)	chrna1 (ENSSAUG00010004697)	ENSSAUG00010004675	ENSSAUG00010004672	ENSSAUG00010004671	ENSSAUG00010004599	mtx2 (ENSSAUG00010004520)	cdh5 (ENSSAUG00010004511)	ENSSAUG00010004509
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Large yellow croaker	MODERN SPECIES	479	ENSLCRG00005010529	ENSLCRG00005010528	ENSLCRG00005010526	ENSLCRG00005010523	ENSLCRG00005010520	ENSLCRG00005010518	ENSLCRG00005010516	ENSLCRG00005010513	ENSLCRG00005010511	ENSLCRG00005010510	ENSLCRG00005010508	ENSLCRG00005010507	ENSLCRG00005010494	ENSLCRG00005010285	ENSLCRG00005010279	ENSLCRG00005010274 #22	cdc5l (ENSLCRG00005009914)	ENSLCRG00005009906	ENSLCRG00005005417	crls1 (ENSLCRG00005005366)	MCM8 (ENSLCRG00005004761)	SMCO4 (ENSLCRG00005004739)	nlk2 (ENSLCRG00005004670)	ENSLCRG00005004665	NLRX1 (ENSLCRG00005004226)	ENSLCRG00005004220	ENSLCRG00005004218	pgm2l1 (ENSLCRG00005004173)	lipt2 (ENSLCRG00005004167)	rnf169 (ENSLCRG00005004165)	spcs2 (ENSLCRG00005004163)
European seabass	MODERN SPECIES	1	ENSDLAG00005005508	ENSDLAG00005004480	ENSDLAG00005004290	ENSDLAG00005004172	ENSDLAG00005004152	ENSDLAG00005028695	ENSDLAG00005018573	ZC3H15 (ENSDLAG00005018563)	ENSDLAG00005030646	DUSP19 (ENSDLAG00005018555)	NCKAP1 (ENSDLAG00005026891)	ENSDLAG00005030099	ENSDLAG00005033108	ENSDLAG00005018522	ENSDLAG00005018503	ENSDLAG00005018465 #22	ENSDLAG00005018404	ENSDLAG00005018162	ENSDLAG00005017776	ENSDLAG00005004995	ENSDLAG00005032739	ENSDLAG00005033574	ENSDLAG00005017751	ENSDLAG00005015943	ENSDLAG00005015790	ENSDLAG00005015732	ENSDLAG00005033867	ENSDLAG00005015721	ENSDLAG00005015719	ENSDLAG00005015686	ENSDLAG00005015679
Ballan wrasse	MODERN SPECIES	630														ENSLBEG00000019564	ENSLBEG00000019529	ENSLBEG00000019510 #22	cdc5l (ENSLBEG00000019437)	napba (ENSLBEG00000019341)	ENSLBEG00000019282	crls1 (ENSLBEG00000019251)	MCM8 (ENSLBEG00000019159)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000157784.d	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Climbing perch	MODERN SPECIES	6	cryzl1 (ENSATEG00000017357)	ENSATEG00000017229	ENSATEG00000027103	pdxkb (ENSATEG00000029694)	ENSATEG00000017160	ENSATEG00000027678	NCKAP1 (ENSATEG00000017052)	DUSP19 (ENSATEG00000017025)	ENSATEG00000025369	ZC3H15 (ENSATEG00000016978)	ENSATEG00000016948	ENSATEG00000016931	ENSATEG00000016921	ENSATEG00000016874	ENSATEG00000016849	ENSATEG00000016817 #22	ENSATEG00000016760	ENSATEG00000016729	ENSATEG00000030198	ENSATEG00000016680	ENSATEG00000016631	ENSATEG00000016541	ENSATEG00000016503	ENSATEG00000016475	ENSATEG00000016381	ENSATEG00000016357	ENSATEG00000016342	ENSATEG00000030045	ENSATEG00000016253	ENSATEG00000016233	ENSATEG00000016223
Siamese fighting fish	MODERN SPECIES	6	ITSN1 (ENSBSLG00000023525)	pdxkb (ENSBSLG00000023362)	pdxkb (ENSBSLG00000023347)	ENSBSLG00000023344	ENSBSLG00000023342	ENSBSLG00000023339	nckap1 (ENSBSLG00000023001)	DUSP19 (ENSBSLG00000022976)	ENSBSLG00000022971	zc3h15 (ENSBSLG00000022947)	rbm45 (ENSBSLG00000022932)	ENSBSLG00000022915	gja5b (ENSBSLG00000022899)	ENSBSLG00000022870	ENSBSLG00000022852	ENSBSLG00000022775 #22	cdc5l (ENSBSLG00000022760)	napba (ENSBSLG00000022692)	ENSBSLG00000021666	crls1 (ENSBSLG00000021627)	MCM8 (ENSBSLG00000021250)	ENSBSLG00000020568	cdh11 (ENSBSLG00000020039)	chrna1 (ENSBSLG00000019926)	ENSBSLG00000019858	ENSBSLG00000019845	ENSBSLG00000019832	mtx2 (ENSBSLG00000019798)	cdh5 (ENSBSLG00000019764)	ENSBSLG00000019737	tmem41ab (ENSBSLG00000019735)
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000022439	ENSMAMG00000026809	ENSMAMG00000022435	ENSMAMG00000022431	ENSMAMG00000025279	ENSMAMG00000022427	ENSMAMG00000022424	NCKAP1 (ENSMAMG00000022418)	ENSMAMG00000022417	ZC3H15 (ENSMAMG00000022415)	ENSMAMG00000022413	ENSMAMG00000022412	ENSMAMG00000027495	ENSMAMG00000022407	ENSMAMG00000022406	ENSMAMG00000022404 #22	ENSMAMG00000025746	ENSMAMG00000025087	ENSMAMG00000022399	ENSMAMG00000025747	ENSMAMG00000022392	ENSMAMG00000028381	ENSMAMG00000022387	ENSMAMG00000022386	ENSMAMG00000017848	ENSMAMG00000022384	ENSMAMG00000022383	ENSMAMG00000022381	ENSMAMG00000022380	ENSMAMG00000027018	ENSMAMG00000022378
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Carangaria_A	ANCESTRAL SPECIES	39	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000154664.h.m.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Barramundi perch	MODERN SPECIES	145	setd4 (ENSLCAG00010000807)	cryzl1 (ENSLCAG00010000816)	ITSN1 (ENSLCAG00010000855)	ENSLCAG00010000958	pdxkb (ENSLCAG00010000974)	KLHL10 (ENSLCAG00010000987)	plekha3 (ENSLCAG00010000989)	ENSLCAG00010000991	nckap1 (ENSLCAG00010001309)	dusp19b (ENSLCAG00010002383)	zc3h15 (ENSLCAG00010002385)	rbm45 (ENSLCAG00010002388)	ENSLCAG00010002391	ENSLCAG00010002401	ENSLCAG00010002404	supt3h (ENSLCAG00010002408) #22	cdc5l (ENSLCAG00010002437)	ENSLCAG00010002624	ENSLCAG00010002639	crls1 (ENSLCAG00010002671)	MCM8 (ENSLCAG00010002686)	ENSLCAG00010002690
Seriola	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Yellowtail amberjack	MODERN SPECIES	3225						plekha3 (ENSSLDG00000017449)	ppp1r1c (ENSSLDG00000017467)	nckap1 (ENSSLDG00000017483)	ENSSLDG00000017554	dusp19b (ENSSLDG00000017558)	zc3h15 (ENSSLDG00000017569)	rbm45 (ENSSLDG00000017621)	ENSSLDG00000017656	gja5b (ENSSLDG00000017676)	ENSSLDG00000017704	supt3h (ENSSLDG00000017724) #22	cdc5l (ENSSLDG00000017777)	ENSSLDG00000017870	ENSSLDG00000017899	ENSSLDG00000017916	crls1 (ENSSLDG00000017941)	MCM8 (ENSSLDG00000017978)	cdh11 (ENSSLDG00000018031)	chrna1 (ENSSLDG00000018091)	ENSSLDG00000018124	ENSSLDG00000018152	ENSSLDG00000018162	ENSSLDG00000018206	mtx2 (ENSSLDG00000018256)	cdh5 (ENSSLDG00000018282)	ENSSLDG00000018303
Greater amberjack	MODERN SPECIES	52	cbr1 (ENSSDUG00000014166)	setd4 (ENSSDUG00000014180)	cryzl1 (ENSSDUG00000014205)	ITSN1 (ENSSDUG00000014229)	ENSSDUG00000014300	pdxkb (ENSSDUG00000014309)	ENSSDUG00000014331	ppp1r1c (ENSSDUG00000014336)	nckap1 (ENSSDUG00000014354)	dusp19b (ENSSDUG00000014438)	zc3h15 (ENSSDUG00000014445)	rbm45 (ENSSDUG00000014461)	ENSSDUG00000014486	gja5b (ENSSDUG00000014496)	ENSSDUG00000014514	supt3h (ENSSDUG00000014534) #22	cdc5l (ENSSDUG00000014563)
Pleuronectoidei	ANCESTRAL SPECIES	48	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000176046	ENSGT00390000003874.a.b	ENSGT00940000155850	ENSGT00940000160192	ENSGT00390000016619.a	ENSGT01050000245335	ENSGT00940000156472.c	ENSGT00940000160909.e	ENSGT00390000015818	ENSGT00680000100059	ENSGT00940000157883.a.a	ENSGT01050000244864.C.f	ENSGT00940000156598.c.a	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00390000005826.a.b.h.a	ENSGT00940000155428.b	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00940000153691.a.a	ENSGT00940000156851.d	ENSGT00390000001859.f	ENSGT00940000161503.b	ENSGT00940000158988.a.b	ENSGT00950000182919.C	ENSGT00940000165928.j	ENSGT00940000165226	ENSGT00940000162528	ENSGT00390000004153.d
Turbot	MODERN SPECIES	6	cryzl1 (ENSSMAG00000001067)	ENSSMAG00000001127	ENSSMAG00000037229	pdxkb (ENSSMAG00000028455)	ENSSMAG00000027237	ENSSMAG00000001541	NCKAP1 (ENSSMAG00000001571)	DUSP19 (ENSSMAG00000001760)	ENSSMAG00000029282	ZC3H15 (ENSSMAG00000001788)	ENSSMAG00000001822	ENSSMAG00000001840	ENSSMAG00000037771	ENSSMAG00000001872	ENSSMAG00000001885	ENSSMAG00000001893 #22	cdc5l (ENSSMAG00000001917)	ENSSMAG00000001976	ENSSMAG00000002006	ENSSMAG00000023176	ENSSMAG00000002038	ENSSMAG00000002058	ENSSMAG00000002127	ENSSMAG00000002162	ENSSMAG00000002212	ENSSMAG00000025912	ENSSMAG00000002242	ENSSMAG00000025524	ENSSMAG00000002271	ENSSMAG00000002304	ENSSMAG00000002318
Tongue sole	MODERN SPECIES	3	ENSCSEG00000017913	PIEZO1 (ENSCSEG00000017534)	tm9sf2 (ENSCSEG00000017518)	ENSCSEG00000017503	chrna1 (ENSCSEG00000017495)	cdh11 (ENSCSEG00000017477)	ENSCSEG00000017466	nckap1 (ENSCSEG00000017451)	ENSCSEG00000017444	dusp19b (ENSCSEG00000017443)	zc3h15 (ENSCSEG00000017422)	rbm45 (ENSCSEG00000017409)	ENSCSEG00000017398	gja5b (ENSCSEG00000017394)	ENSCSEG00000017387	supt3h (ENSCSEG00000017349) #22	cdc5l (ENSCSEG00000017309)	si:ch73-130a3.4 (ENSCSEG00000017296)	ENSCSEG00000017237	ENSCSEG00000017185	ENSCSEG00000017170	CRLS1 (ENSCSEG00000017167)	MCM8 (ENSCSEG00000017142)	ncapd3 (ENSCSEG00000017061)	CALHM3 (ENSCSEG00000017051)	hells (ENSCSEG00000016985)	ENSCSEG00000016941	ENSCSEG00000016934	tlx1 (ENSCSEG00000016924)	fbxw4 (ENSCSEG00000016917)	fgf8a (ENSCSEG00000016911)
Pinecone sodierfish	MODERN SPECIES	6	dusp19b (ENSMMDG00005008799)	nckap1 (ENSMMDG00005007441)	ppp1r1c (ENSMMDG00005007400)	ENSMMDG00005007399	ENSMMDG00005007398	agpat3 (ENSMMDG00005007369)	pdxkb (ENSMMDG00005007368)	ENSMMDG00005007367	ITSN1 (ENSMMDG00005007355)	cryzl1 (ENSMMDG00005007352)	setd4 (ENSMMDG00005007350)	cbr1 (ENSMMDG00005007348)	gja5b (ENSMMDG00005007346)	ENSMMDG00005006983	ENSMMDG00005006975	supt3h (ENSMMDG00005006972) #22	cdc5l (ENSMMDG00005006968)	napba (ENSMMDG00005006966)	ENSMMDG00005024636	ENSMMDG00005024635	crls1 (ENSMMDG00005024634)	MCM8 (ENSMMDG00005024587)	nt5c2a (ENSMMDG00005024586)	borcs7 (ENSMMDG00005024585)	cyp17a1 (ENSMMDG00005024584)	wbp1la (ENSMMDG00005024583)	fbxw4 (ENSMMDG00005024581)	fgf8a (ENSMMDG00005024579)	slc2a15a (ENSMMDG00005024578)	ENSMMDG00005024576	tlx1 (ENSMMDG00005024575)
Cod	MODERN SPECIES	6	ENSGMOG00000034606	ENSGMOG00000022539	CFAP36 (ENSGMOG00000006770)	ENSGMOG00000006789	PNPT1 (ENSGMOG00000006805)	ENSGMOG00000035619	ENSGMOG00000002090	ENSGMOG00000031256	ENSGMOG00000029847	ENSGMOG00000008635	ENSGMOG00000008641	cbr1 (ENSGMOG00000035769)	ENSGMOG00000030421	ENSGMOG00000035736	ENSGMOG00000029596	ENSGMOG00000000394 #22	ENSGMOG00000000407	ENSGMOG00000000430	ENSGMOG00000000448	ENSGMOG00000015177	ENSGMOG00000012770	ENSGMOG00000028114	ENSGMOG00000023879	ENSGMOG00000016272	ENSGMOG00000029191	ENSGMOG00000032277	ENSGMOG00000032977	ENSGMOG00000011830	ENSGMOG00000035195	ENSGMOG00000037028	ENSGMOG00000024671
Otomorpha	ANCESTRAL SPECIES	478														ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Clupeiformes	ANCESTRAL SPECIES	61	ENSGT00940000162247.e	ENSGT00940000159727.h.b	ENSGT00940000159137.b.a	ENSGT00940000155999.e.a	ENSGT00950000183024.a.a.b.q	ENSGT00940000160847	ENSGT00390000003107.a	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00530000063946.b	ENSGT00940000157012.k	ENSGT00940000161252.g	ENSGT00950000183142.a.b.a.a	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607
Denticle herring	MODERN SPECIES		NKX2-2 (ENSDCDG00000026732)	pax1a (ENSDCDG00000026722)	foxa2 (ENSDCDG00000026715)	PRKD3 (ENSDCDG00000026573)	mocs3 (ENSDCDG00000026457)	QPCT (ENSDCDG00000026358)	ENSDCDG00000026334	ENSDCDG00000026332	ENSDCDG00000026327	SCAF8 (ENSDCDG00000026321)	TIAM2 (ENSDCDG00000026288)	CLDN20 (ENSDCDG00000026275)	tfb1m (ENSDCDG00000026272)	clic5a (ENSDCDG00000026267)	runx2a (ENSDCDG00000026250) #21	supt3h (ENSDCDG00000026135) #22	cdc5l (ENSDCDG00000026131)	KLHL29 (ENSDCDG00000026128)	napba (ENSDCDG00000026121)	MCM8 (ENSDCDG00000026028)	ENSDCDG00000026018	gdf3 (ENSDCDG00000026016)	bmp2a (ENSDCDG00000026014)	hao1 (ENSDCDG00000026012)	tmx4 (ENSDCDG00000026010)	PLCB1 (ENSDCDG00000025932)	PLCB4 (ENSDCDG00000025892)	TPO (ENSDCDG00000025868)	sntg2 (ENSDCDG00000025865)	TMEM151B (ENSDCDG00000025859)	ENSDCDG00000025853
Atlantic herring	MODERN SPECIES	5	COL12A1 (ENSCHAG00000017415)	insm1b (ENSCHAG00000017345)	RALGAPA2 (ENSCHAG00000012862)	kiz (ENSCHAG00000012668)	nkx2.4a (ENSCHAG00000012635)	ENSCHAG00000012614	nkx2.2a (ENSCHAG00000012578)	pax1a (ENSCHAG00000012504)	PRKD3 (ENSCHAG00000008830)	ENSCHAG00000008752	TIAM2 (ENSCHAG00000008655)	CLDN20 (ENSCHAG00000008645)	tfb1m (ENSCHAG00000008629)	clic5a (ENSCHAG00000008517)	runx2a (ENSCHAG00000008263) #21	supt3h (ENSCHAG00000008121) #22	cdc5l (ENSCHAG00000008024)	KLHL29 (ENSCHAG00000007973)	ENSCHAG00000007949	napba (ENSCHAG00000007603)	MCM8 (ENSCHAG00000006113)	crls1 (ENSCHAG00000006063)	bmp2a (ENSCHAG00000006034)	hao1 (ENSCHAG00000005739)	tmx4 (ENSCHAG00000005714)	PLCB1 (ENSCHAG00000004483)	PLCB4 (ENSCHAG00000003347)	TPO (ENSCHAG00000003228)	sntg2 (ENSCHAG00000002999)	TMEM151B (ENSCHAG00000002984)	ENSCHAG00000002858
Otophysi	ANCESTRAL SPECIES	138	ENSGT01090000260098.A.j	ENSGT00940000157418.b	ENSGT00940000158299.b	ENSGT00940000158614	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000004923.B.c	ENSGT00390000005345	ENSGT00940000154242.a.c	ENSGT01030000234996	ENSGT00390000014037.d	ENSGT01070000253766.C.p	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Characiphysae	ANCESTRAL SPECIES	109	ENSGT00940000160303.b	ENSGT00940000158299.b	ENSGT00940000158614	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000004923.B.c	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000154242.a.c	ENSGT01030000234996	ENSGT00390000014037.d	ENSGT01070000253766.C.p	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Channel catfish	MODERN SPECIES	28	chrna2a (ENSIPUG00000004069)	ephx2 (ENSIPUG00000004085)	plaat1l (ENSIPUG00000004135)	ZNF513 (ENSIPUG00000004152)	Fndc4 (ENSIPUG00000004165)	gckr (ENSIPUG00000004194)	ENSIPUG00000004220	ENSIPUG00000004233	c9h8orf74 (ENSIPUG00000004249)	ENSIPUG00000004258	XKR6 (ENSIPUG00000004268)	fam167aa (ENSIPUG00000004271)	enpp4 (ENSIPUG00000004279)	Clic5 (ENSIPUG00000004294)	runx2 (ENSIPUG00000004334) #21	supt3h (ENSIPUG00000004345) #22	cdc5l (ENSIPUG00000004377)	KLHL29 (ENSIPUG00000004422)	ENSIPUG00000004453	napba (ENSIPUG00000004506)	MCM8 (ENSIPUG00000004568)	crls1 (ENSIPUG00000004654)	gdf3 (ENSIPUG00000004662)	bmp2a (ENSIPUG00000004667)	hao1 (ENSIPUG00000004677)	Tmx4 (ENSIPUG00000004746)	plcb1 (ENSIPUG00000004782)	PLCB4 (ENSIPUG00000004881)	TPO (ENSIPUG00000005018)	sntg2 (ENSIPUG00000005059)	TMEM151B (ENSIPUG00000005106)
Characiphysae_b	ANCESTRAL SPECIES	116	ENSGT00940000160303.b	ENSGT00940000158299.b	ENSGT00940000158614	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000004923.B.c	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000154242.a.c	ENSGT01030000234996	ENSGT00390000014037.d	ENSGT01070000253766.C.p	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Characoidei	ANCESTRAL SPECIES	105	ENSGT00940000160303.b	ENSGT00940000158299.b	ENSGT00940000158614	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000004923.B.c	ENSGT00390000005345	ENSGT00940000164033	ENSGT00940000154242.a.c	ENSGT01030000234996	ENSGT00390000014037.d	ENSGT01070000253766.C.p	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00950000182986.a.b.a.c	ENSGT00390000005826.a.b.h.a	ENSGT01090000260080.a	ENSGT00390000001607	ENSGT00940000164416
Red-bellied piranha	MODERN SPECIES	423		ENSPNAG00000019771	plaat1l (ENSPNAG00000019739)	ZNF513 (ENSPNAG00000019722)	ENSPNAG00000019706	FNDC4 (ENSPNAG00000019683)	ENSPNAG00000019651	ENSPNAG00000019622	ENSPNAG00000019593	ENSPNAG00000019578	XKR6 (ENSPNAG00000019528)	fam167aa (ENSPNAG00000019494)	enpp4 (ENSPNAG00000019487)	clic5a (ENSPNAG00000019446)	runx2a (ENSPNAG00000019394) #21	supt3h (ENSPNAG00000019323) #22	cdc5l (ENSPNAG00000006467)	KLHL29 (ENSPNAG00000019137)
Mexicana tetra	MODERN SPECIES	24	ephx2 (ENSAMXG00000000817)	plaat1l (ENSAMXG00000000847)	ENSAMXG00000037713	FNDC4 (ENSAMXG00000041852)	ENSAMXG00000000857	ENSAMXG00000000862	ENSAMXG00000000865	ENSAMXG00000037055	ENSAMXG00000036679	ENSAMXG00000000872	XKR6 (ENSAMXG00000000875)	fam167aa (ENSAMXG00000034103)	enpp4 (ENSAMXG00000042224)	clic5a (ENSAMXG00000031330)	ENSAMXG00000000881	supt3h (ENSAMXG00000029250) #22	cdc5l (ENSAMXG00000000894)	KLHL29 (ENSAMXG00000043074)	ENSAMXG00000039590	napba (ENSAMXG00000000918)	MCM8 (ENSAMXG00000000929)	crls1 (ENSAMXG00000000941)	gdf3 (ENSAMXG00000000942)	bmp2a (ENSAMXG00000000943)	hao1 (ENSAMXG00000015057)	tmx4 (ENSAMXG00000039592)	PLCB1 (ENSAMXG00000014951)	PLCB4 (ENSAMXG00000014913)	TPO (ENSAMXG00000014907)	sntg2 (ENSAMXG00000014894)	TMEM151B (ENSAMXG00000029421)
Electric eel	MODERN SPECIES	60	chrna2a (ENSEEEG00000010002)	ephx2 (ENSEEEG00000009997)	plaat1l (ENSEEEG00000009994)	ENSEEEG00000009991	FNDC4 (ENSEEEG00000009987)	ENSEEEG00000009984	ENSEEEG00000009981	ENSEEEG00000009979	ENSEEEG00000009978	ENSEEEG00000009977	XKR6 (ENSEEEG00000009976)	fam167aa (ENSEEEG00000009975)	enpp4 (ENSEEEG00000009974)	clic5a (ENSEEEG00000009973)	runx2a (ENSEEEG00000009920) #21	supt3h (ENSEEEG00000009846) #22	cdc5l (ENSEEEG00000009839)	KLHL29 (ENSEEEG00000009837)	ENSEEEG00000009835	napba (ENSEEEG00000009820)	MCM8 (ENSEEEG00000009694)	gdf3 (ENSEEEG00000009688)	bmp2a (ENSEEEG00000009681)	hao1 (ENSEEEG00000009678)	tmx4 (ENSEEEG00000009676)	PLCB1 (ENSEEEG00000009567)	PLCB4 (ENSEEEG00000009543)	TPO (ENSEEEG00000009537)	sntg2 (ENSEEEG00000009531)	TMEM151B (ENSEEEG00000009525)	C14orf132 (ENSEEEG00000009523)
Cyprinoidei	ANCESTRAL SPECIES	157		ENSGT00940000157418.b	ENSGT00940000158299.b	ENSGT00940000158614	ENSGT00940000156634.b	ENSGT00940000158687.b	ENSGT00390000004923.B.c	ENSGT00390000005345	ENSGT00940000154242.a.c	ENSGT01030000234996	ENSGT00390000014037.d	ENSGT01070000253766.C.p	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000160171 #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000154664.h.b	ENSGT00940000164416	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00390000005826.a.b.h.a
Cyprininae	ANCESTRAL SPECIES	42	ENSGT00940000158299.b.a	ENSGT00940000158614.h	ENSGT00940000156634.b.c	ENSGT00390000004923.B.c.b.a	ENSGT00390000005345.b	ENSGT00940000154242.a.c.c	ENSGT01030000234996	ENSGT00390000014037.d.b	ENSGT01070000253766.C.p.b	ENSGT00940000159097.ab	ENSGT00940000158831	ENSGT00940000156406.a.a	ENSGT00940000160171.a #21	ENSGT00940000156406.a.b	ENSGT00940000160171.b #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000158824.l.b	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.b.b.b.a.b.a.a.a.b.b	ENSGT00940000154664.h.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	36	nfkbiab (ENSCARG00000054536)	irf2bpl (ENSCARG00000054578)	timm9 (ENSCARG00000054587)	arid4a (ENSCARG00000054624)	ENSCARG00000054778	zgc:109986 (ENSCARG00000054794)	ENSCARG00000054846	cfl2 (ENSCARG00000055139)	snx6 (ENSCARG00000055222)	eapp (ENSCARG00000055860)	sptssa (ENSCARG00000055904)	egln3 (ENSCARG00000055921)	pnn (ENSCARG00000055972)	gemin2 (ENSCARG00000056217)	cdc5l (ENSCARG00000056447)	supt3h (ENSCARG00000056555) #22	ENSCARG00000056656
Goldfish	MODERN SPECIES	36	GJE1 (ENSCARG00000026644)	ENSCARG00000026633	PTK2B (ENSCARG00000024947)	chrna2a (ENSCARG00000024845)	ephx2 (ENSCARG00000024683)	plaat1l (ENSCARG00000024664)	ZNF513 (ENSCARG00000024655)	FNDC4 (ENSCARG00000024644)	ENSCARG00000024577	ENSCARG00000024565	ENSCARG00000024551	XKR6 (ENSCARG00000024539)	ENSCARG00000024531	enpp4 (ENSCARG00000024518)	clic5a (ENSCARG00000024508)	supt3h (ENSCARG00000024480) #22	cdc5l (ENSCARG00000023649)	KLHL29 (ENSCARG00000023420)	ENSCARG00000023389	ENSCARG00000023373	KLHL10 (ENSCARG00000023315)	napba (ENSCARG00000023197)	MCM8 (ENSCARG00000023153)	crls1 (ENSCARG00000023139)	ENSCARG00000023090	bmp2a (ENSCARG00000023060)	hao1 (ENSCARG00000023046)	tmx4 (ENSCARG00000023039)	PLCB1 (ENSCARG00000022829)	ENSCARG00000022806	deaf1 (ENSCARG00000022788)
Cyprininae_a	ANCESTRAL SPECIES	295		ENSGT00940000160303.b.i	ENSGT00940000157269.a.a.t.b	ENSGT00940000158299.b.b	ENSGT00940000158614.g	ENSGT00940000156634.b.d	ENSGT00940000158687.b.b	ENSGT00390000004923.B.c.b.b	ENSGT00390000005345.a	ENSGT00940000154242.a.c.d	ENSGT00390000014037.d.a	ENSGT01070000253766.C.p.a	ENSGT00940000158831.d	ENSGT00940000156406.a.b	ENSGT00940000160171.b #21	ENSGT00390000010738 #22	ENSGT00550000074922	ENSGT00940000158824.l.b	ENSGT00390000005826.a.b.h.a.i.b	ENSGT00940000164416.c	ENSGT00940000155666.c.u.a	ENSGT00390000018717.b.a.a.e	ENSGT00940000160301.g	ENSGT00940000155428.b.a	ENSGT00940000158104	ENSGT00950000182863.B.b.e	ENSGT00950000182863.B.b.f	ENSGT00390000013762.b.a.a.b.b	ENSGT00940000160421.h.a.b	ENSGT00700000106116.b.a	ENSGT01030000234534.A.c.b.a.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	439	PTK2B (ENSSGRG00000055429)	chrna2a (ENSSGRG00000055430)	ephx2 (ENSSGRG00000055431)	plaat1l (ENSSGRG00000055432)	ZNF513 (ENSSGRG00000055433)	FNDC4 (ENSSGRG00000055434)	ENSSGRG00000055435	ENSSGRG00000055436	ENSSGRG00000055437	ENSSGRG00000055438	ENSSGRG00000055439	FAM167A (ENSSGRG00000055440)	enpp4 (ENSSGRG00000055441)	clic5a (ENSSGRG00000055442)	runx2a (ENSSGRG00000055443) #21	supt3h (ENSSGRG00000055444) #22	cdc5l (ENSSGRG00000055446)	KLHL29 (ENSSGRG00000055456)	ENSSGRG00000055458
Golden-line barbel	MODERN SPECIES	178	PTK2B (ENSSGRG00000027955)	chrna2a (ENSSGRG00000027975)	ephx2 (ENSSGRG00000027976)	plaat1l (ENSSGRG00000027977)	ZNF513 (ENSSGRG00000027978)	FNDC4 (ENSSGRG00000027979)	ENSSGRG00000027981	ENSSGRG00000027982	ENSSGRG00000027983	XKR6 (ENSSGRG00000027984)	RAB39A (ENSSGRG00000027985)	FAM167A (ENSSGRG00000027986)	enpp4 (ENSSGRG00000027987)	clic5a (ENSSGRG00000027988)	runx2a (ENSSGRG00000027991) #21	supt3h (ENSSGRG00000028018) #22	cdc5l (ENSSGRG00000028198)	KLHL29 (ENSSGRG00000028477)	napba (ENSSGRG00000028488)	MCM8 (ENSSGRG00000028866)	ENSSGRG00000029119	ENSSGRG00000029121	ENSSGRG00000029125	gdf3 (ENSSGRG00000029129)	bmp2a (ENSSGRG00000029130)	hao1 (ENSSGRG00000029133)	tmx4 (ENSSGRG00000029144)	PLCB1 (ENSSGRG00000029148)	TPO (ENSSGRG00000029153)	sntg2 (ENSSGRG00000029203)	TMEM151B (ENSSGRG00000029217)
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	4	ENSCCRG00000008368	PTK2B (ENSCCRG00000009603)	chrna2a (ENSCCRG00000015983)	ephx2 (ENSCCRG00000002676)	plaat1l (ENSCCRG00000075507)	ENSCCRG00000059470	ENSCCRG00000029255	ENSCCRG00000078176	ENSCCRG00000065265	ENSCCRG00000077292	ENSCCRG00000066440	ENSCCRG00000067696	enpp4 (ENSCCRG00000049485)	clic5a (ENSCCRG00000039099)	runx2a (ENSCCRG00000002729) #21	supt3h (ENSCCRG00000017396) #22	cdc5l (ENSCCRG00000020683)	ENSCCRG00000058854	ENSCCRG00000057651	ENSCCRG00000031706	ENSCCRG00000022804	ENSCCRG00000022874	gdf3 (ENSCCRG00000077515)	bmp2a (ENSCCRG00000023216)	hao1 (ENSCCRG00000082475)	ENSCCRG00000076697	tmx4 (ENSCCRG00000032141)	PLCB1 (ENSCCRG00000024359)	ENSCCRG00000048502	sntg2 (ENSCCRG00000056099)	ENSCCRG00000077627
Common carp reference	MODERN SPECIES	30	chrna2a (ENSCCRG00000032315)	ephx2 (ENSCCRG00000032319)	plaat1l (ENSCCRG00000060893)	ENSCCRG00000065156	ENSCCRG00000049383	ENSCCRG00000029251	ENSCCRG00000049407	ENSCCRG00000066470	ENSCCRG00000049423	ENSCCRG00000057451	ENSCCRG00000080712	fam167aa (ENSCCRG00000052911)	enpp4 (ENSCCRG00000072917)	clic5a (ENSCCRG00000049489)	runx2a (ENSCCRG00000039136) #21	supt3h (ENSCCRG00000034464) #22	cdc5l (ENSCCRG00000025645)	ENSCCRG00000077393	ENSCCRG00000071133	ENSCCRG00000057847	ENSCCRG00000075570	ENSCCRG00000060896	ENSCCRG00000023156	napba (ENSCCRG00000023163)	MCM8 (ENSCCRG00000057408)	crls1 (ENSCCRG00000066607)	bmp2a (ENSCCRG00000024422)	hao1 (ENSCCRG00000076440)	ENSCCRG00000079252	tmx4 (ENSCCRG00000019119)	PLCB1 (ENSCCRG00000079779)
Zebrafish	MODERN SPECIES	8	chrna2a (ENSDARG00000006602)	ephx2 (ENSDARG00000040255)	plaat1l (ENSDARG00000074014)	ZNF513 (ENSDARG00000101203)	ENSDARG00000086620	FNDC4 (ENSDARG00000009949)	ENSDARG00000040258	ENSDARG00000089458	ENSDARG00000075206	XKR6 (ENSDARG00000020443)	ENSDARG00000102580	fam167aa (ENSDARG00000067665)	enpp4 (ENSDARG00000006877)	clic5a (ENSDARG00000075993)	runx2a (ENSDARG00000040261) #21	supt3h (ENSDARG00000098141) #22	cdc5l (ENSDARG00000043797)	KLHL29 (ENSDARG00000043799)	ENSDARG00000094606	ENSDARG00000090946	KLHL10 (ENSDARG00000005814)	crls1 (ENSDARG00000038000)	MCM8 (ENSDARG00000074326)	napba (ENSDARG00000013669)	gdf3 (ENSDARG00000037995)	bmp2a (ENSDARG00000013409)	ENSDARG00000116363	hao1 (ENSDARG00000024160)	tmx4 (ENSDARG00000101512)	PLCB1 (ENSDARG00000109726)	PLCB4 (ENSDARG00000100786)