Murinae	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.b.a.a #7	ENSGT00990000203615.b.a.a.a.b #8	ENSGT00940000160662 #9	ENSGT00940000160202 #10	ENSGT00500000044950 #11	ENSGT00950000183107.a.b.a #12	ENSGT00950000182802.A #13	ENSGT00390000008610.a.b.a.a.b #14	ENSGT00560000077266.b #15	ENSGT00940000159847 #16	ENSGT00940000160964 #17	ENSGT00940000163238 #18	ENSGT01090000259987.a.a.a.d #19	ENSGT00530000064267 #20	ENSGT00940000154678.a.a #21	ENSGT00940000159548 #22	ENSGT00940000155686.j #23	ENSGT00950000183004.a.b.a.b #24	ENSGT00940000155686.i #25	ENSGT00940000155207.a.b	ENSGT00940000159908 #26	ENSGT00940000157890 #27	ENSGT00530000063764.a #28	ENSGT00940000161028 #29
Mus	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.b.a.a #7	ENSGT00990000203615.b.a.a.a.b #8	ENSGT00940000160662 #9	ENSGT00940000160202 #10	ENSGT00500000044950 #11	ENSGT00950000183107.a.b.a #12	ENSGT00950000182802.A #13	ENSGT00390000008610.a.b.a.a.b #14	ENSGT00560000077266.b #15	ENSGT00940000159847 #16	ENSGT00940000160964 #17	ENSGT00940000163238 #18	ENSGT01090000259987.a.a.a.d #19	ENSGT00530000064267 #20	ENSGT00940000154678.a.a #21	ENSGT00940000159548 #22	ENSGT00940000155686.j #23	ENSGT00950000183004.a.b.a.b #24	ENSGT00940000155686.i #25	ENSGT00940000155207.a.b	ENSGT00940000159908 #26	ENSGT00940000157890 #27	ENSGT00530000063764.a #28	ENSGT00940000161028 #29
Mus_A	ANCESTRAL SPECIES	18	ENSGT01080000257365.b.a.b.a.a #7	ENSGT00990000203615.b.a.a.a.b #8	ENSGT00940000160662 #9	ENSGT00940000160202 #10	ENSGT00500000044950 #11	ENSGT00950000183107.a.b.a #12	ENSGT00950000182802.A.u.b #13	ENSGT00390000008610.a.b.a.a.b #14	ENSGT00560000077266.b #15	ENSGT00940000159847 #16	ENSGT00940000160964 #17	ENSGT00940000163238 #18	ENSGT01090000259987.a.a.a.d #19	ENSGT00530000064267 #20	ENSGT00940000154678.a.a #21	ENSGT00940000159548 #22	ENSGT00940000155686.j #23	ENSGT00950000183004.a.b.a.b #24	ENSGT00940000155686.i #25	ENSGT00940000155207.a.b	ENSGT00940000159908 #26	ENSGT00940000157890 #27	ENSGT00530000063764.a #28	ENSGT00940000161028 #29
Ryukyu mouse	MODERN SPECIES	7	Kcnj6 (MGP_CAROLIEiJ_G0020993) #7	Kcnj15 (MGP_CAROLIEiJ_G0020994) #8	Erg (MGP_CAROLIEiJ_G0020995) #9	Ets2 (MGP_CAROLIEiJ_G0020996) #10	Psmg1 (MGP_CAROLIEiJ_G0020997) #11	Brwd1 (MGP_CAROLIEiJ_G0020998) #12	MGP_CAROLIEiJ_G0020999 #13	MGP_CAROLIEiJ_G0021000 #14	Lca5l (MGP_CAROLIEiJ_G0021001) #15	MGP_CAROLIEiJ_G0021002 #16	B3galt5 (MGP_CAROLIEiJ_G0021003) #17	Igsf5 (MGP_CAROLIEiJ_G0021004) #18	Itgb2l (MGP_CAROLIEiJ_G0021005) #19	MGP_CAROLIEiJ_G0021006 #20	Dscam (MGP_CAROLIEiJ_G0021007) #21	Bace2 (MGP_CAROLIEiJ_G0021008) #22	MGP_CAROLIEiJ_G0021009 #23	Fam3b (MGP_CAROLIEiJ_G0021010) #24	MGP_CAROLIEiJ_G0008949 #25	Ripk4 (MGP_CAROLIEiJ_G0021011) #26	Prdm15 (MGP_CAROLIEiJ_G0021012) #27	C2cd2 (MGP_CAROLIEiJ_G0021013) #28	Zbtb21 (MGP_CAROLIEiJ_G0021014) #29
Mus_B	ANCESTRAL SPECIES	18	ENSGT01080000257365.b.a.b.a.a #7	ENSGT00990000203615.b.a.a.a.b #8	ENSGT00940000160662 #9	ENSGT00940000160202 #10	ENSGT00500000044950 #11	ENSGT00950000183107.a.b.a #12	ENSGT00950000182802.A.u.a ##13	ENSGT00390000008610.a.b.a.a.b #14	ENSGT00560000077266.b #15	ENSGT00940000159847 #16	ENSGT00940000160964 #17	ENSGT00940000163238 #18	ENSGT01090000259987.a.a.a.d #19	ENSGT00530000064267 #20	ENSGT00940000154678.a.a #21	ENSGT00940000159548 #22	ENSGT00940000155686.j #23	ENSGT00950000183004.a.b.a.b #24	ENSGT00940000155686.i #25	ENSGT00940000155207.a.b	ENSGT00940000159908 #26	ENSGT00940000157890 #27	ENSGT00530000063764.a #28	ENSGT00940000161028 #29
Mouse	MODERN SPECIES	7	Kcnj15 (ENSMUSG00000062609) #8	Erg (ENSMUSG00000040732) #9	Ets2 (ENSMUSG00000022895) #10	Psmg1 (ENSMUSG00000022913) #11	Brwd1 (ENSMUSG00000022914) #12	Hmgn1 (ENSMUSG00000040681) ##13	Get1 (ENSMUSG00000023147)	Lca5l (ENSMUSG00000045275) #15	Sh3bgr (ENSMUSG00000040666) #16	B3galt5 (ENSMUSG00000074892) #17	Igsf5 (ENSMUSG00000000159) #18	Gm49948 (ENSMUSG00000117081)	Itgb2l (ENSMUSG00000000157) #19	Pcp4 (ENSMUSG00000090223)	Dscam (ENSMUSG00000050272) #21	Bace2 (ENSMUSG00000040605) #22	Mx1 (ENSMUSG00000000386) #23	Fam3b (ENSMUSG00000022938) #24	Mx2 (ENSMUSG00000023341) #25	Tmprss2 (ENSMUSG00000000385)	Ripk4 (ENSMUSG00000005251) #26	Prdm15 (ENSMUSG00000014039) #27	C2cd2 (ENSMUSG00000045975) #28	Zbtb21 (ENSMUSG00000046962) #29	B230307C23Rik (ENSMUSG00000080717)	A630089N07Rik (ENSMUSG00000116673)
Mus_C	ANCESTRAL SPECIES	12	ENSGT01080000257365.b.a.b.a.a #7	ENSGT00990000203615.b.a.a.a.b #8	ENSGT00940000160662 #9	ENSGT00940000160202 #10	ENSGT00500000044950 #11	ENSGT00950000183107.a.b.a #12	ENSGT00950000182802.A.u.a ##13	ENSGT00390000008610.a.b.a.a.b #14	ENSGT00560000077266.b #15	ENSGT00940000159847 #16	ENSGT00940000160964 #17	ENSGT00940000163238 #18	ENSGT01090000259987.a.a.a.d #19	ENSGT00530000064267 #20	ENSGT00940000154678.a.a #21	ENSGT00940000159548 #22	ENSGT00940000155686.j #23	ENSGT00950000183004.a.b.a.b #24	ENSGT00940000155686.i #25	ENSGT00940000155207.a.b	ENSGT00940000159908 #26	ENSGT00940000157890 #27	ENSGT00530000063764.a #28	ENSGT00940000161028 #29
Steppe mouse	MODERN SPECIES	2600																Bace2 (ENSMSIG00000020064) #22	ENSMSIG00000020084 #23	Fam3b (ENSMSIG00000020247) #24	ENSMSIG00000020383 #25	ENSMSIG00000020427	Ripk4 (ENSMSIG00000020456) #26	Prdm15 (ENSMSIG00000020473) #27	ENSMSIG00000020580 #29	ENSMSIG00000020680
spretus	MODERN SPECIES	7	Dyrk1a (MGP_SPRETEiJ_G0021898)	Kcnj6 (MGP_SPRETEiJ_G0021899) #7	Kcnj15 (MGP_SPRETEiJ_G0021900) #8	Erg (MGP_SPRETEiJ_G0021901) #9	Ets2 (MGP_SPRETEiJ_G0021902) #10	Psmg1 (MGP_SPRETEiJ_G0021903) #11	Hmgn1 (MGP_SPRETEiJ_G0021905) ##13	MGP_SPRETEiJ_G0021906 #14	Lca5l (MGP_SPRETEiJ_G0021907) #15	MGP_SPRETEiJ_G0021908 #16	B3galt5 (MGP_SPRETEiJ_G0021909) #17	Igsf5 (MGP_SPRETEiJ_G0021910) #18	Itgb2l (MGP_SPRETEiJ_G0021911) #19	MGP_SPRETEiJ_G0021912 #20	Dscam (MGP_SPRETEiJ_G0021913) #21	Bace2 (MGP_SPRETEiJ_G0021914) #22	MGP_SPRETEiJ_G0021915 #23	Fam3b (MGP_SPRETEiJ_G0021916) #24	Tmprss2 (MGP_SPRETEiJ_G0021917)	Ripk4 (MGP_SPRETEiJ_G0021918) #26	Prdm15 (MGP_SPRETEiJ_G0021919) #27	C2cd2 (MGP_SPRETEiJ_G0021920) #28	Zbtb21 (MGP_SPRETEiJ_G0021921) #29
Shrew mouse	MODERN SPECIES	3	Kcnj6 (MGP_PahariEiJ_G0016698) #7	Kcnj15 (MGP_PahariEiJ_G0016699) #8	Erg (MGP_PahariEiJ_G0016700) #9	Ets2 (MGP_PahariEiJ_G0016701) #10	Psmg1 (MGP_PahariEiJ_G0016702) #11	MGP_PahariEiJ_G0016703 #12	MGP_PahariEiJ_G0016704	MGP_PahariEiJ_G0016705 #14	Lca5l (MGP_PahariEiJ_G0016706) #15	MGP_PahariEiJ_G0016707 #16	B3galt5 (MGP_PahariEiJ_G0016708) #17	Igsf5 (MGP_PahariEiJ_G0016709) #18	Itgb2l (MGP_PahariEiJ_G0016710) #19	MGP_PahariEiJ_G0016711 #20	Dscam (MGP_PahariEiJ_G0016712) #21	Bace2 (MGP_PahariEiJ_G0016713) #22	MGP_PahariEiJ_G0016714 #23	Fam3b (MGP_PahariEiJ_G0016715) #24	MGP_PahariEiJ_G0008412 #25	Tmprss2 (MGP_PahariEiJ_G0016716)	Ripk4 (MGP_PahariEiJ_G0016717) #26	Prdm15 (MGP_PahariEiJ_G0016718) #27	C2cd2 (MGP_PahariEiJ_G0016719) #28	Zbtb21 (MGP_PahariEiJ_G0016720) #29
Rat	MODERN SPECIES	2	Kcnj15 (ENSRNOG00000062944) #8	Erg (ENSRNOG00000001652) #9	Ets2 (ENSRNOG00000001647) #10	Psmg1 (ENSRNOG00000001643) #11	Brwd1 (ENSRNOG00000001632) #12	ENSRNOG00000067977	Hmgn1 (ENSRNOG00000048226) #13	Get1 (ENSRNOG00000001629)	Lca5l (ENSRNOG00000028248) #15	Sh3bgr (ENSRNOG00000028238) #16	B3galt5 (ENSRNOG00000030983) #17	Igsf5 (ENSRNOG00000028216) #18	ENSRNOG00000063024	Pcp4 (ENSRNOG00000001628) #20	Dscam (ENSRNOG00000027992) #21	Bace2 (ENSRNOG00000001953) #22	Mx1 (ENSRNOG00000001959) #23	Fam3b (ENSRNOG00000001962) #24	Mx2 (ENSRNOG00000001963) #25	Tmprss2 (ENSRNOG00000001976)	Ripk4 (ENSRNOG00000001618) #26	Prdm15 (ENSRNOG00000001620) #27	C2cd2 (ENSRNOG00000001621) #28	Zbtb21 (ENSRNOG00000001623) #29	Nsun3 (ENSRNOG00000070121)	RGD1565472 (ENSRNOG00000046991)	Epha6 (ENSRNOG00000029184)	Arl6 (ENSRNOG00000001689)	Crybg3 (ENSRNOG00000045728)	Riox2 (ENSRNOG00000001680)	Gabrr3 (ENSRNOG00000001679)