Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00390000011904 #29	ENSGT00940000159015 #28	ENSGT00910000148102	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Amniota	ANCESTRAL SPECIES	2	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mammalia	ANCESTRAL SPECIES	1	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Theria	ANCESTRAL SPECIES	6	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00510000047107.B	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Primates	ANCESTRAL SPECIES	10	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00910000146990	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.g.a.c.b	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00910000146990	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.g.a.c.b	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33
Vervet Monkey	MODERN SPECIES	19	DGKQ (ENSCSAG00000015416) #7	SLC26A1 (ENSCSAG00000015468) #8	IDUA (ENSCSAG00000015497) #9	FGFRL1 (ENSCSAG00000015508) #10	RNF212 (ENSCSAG00000015539) #11	ENSCSAG00000015572 #12	SPON2 (ENSCSAG00000015578) #13	CTBP1 (ENSCSAG00000015583) #14	MAEA (ENSCSAG00000015589) #15	UVSSA (ENSCSAG00000015594) #16	NKX1-1 (ENSCSAG00000015596) #17	FAM53A (ENSCSAG00000015598) #18	SLBP (ENSCSAG00000015628) #19	TMEM129 (ENSCSAG00000015634) #20	TACC3 (ENSCSAG00000015639) #21	FGFR3 (ENSCSAG00000015647) #22	LETM1 (ENSCSAG00000015656) #23	NSD2 (ENSCSAG00000015664) #24	NELFA (ENSCSAG00000015669) #25	C4orf48 (ENSCSAG00000015674) #26	NAT8L (ENSCSAG00000015681) #27	POLN (ENSCSAG00000015716) #28	HAUS3 (ENSCSAG00000015734) #29	MXD4 (ENSCSAG00000015741) #30	ZFYVE28 (ENSCSAG00000015744) #31	CFAP99 (ENSCSAG00000015752) #32	FAM193A (ENSCSAG00000015766) #33	TNIP2 (ENSCSAG00000015771) #34	SH3BP2 (ENSCSAG00000015782) #35	ADD1 (ENSCSAG00000015789) #36	MFSD10 (ENSCSAG00000015797) #37
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00910000146990	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.h.h.a	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00910000146990	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.h.h.a	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Olive baboon	MODERN SPECIES	13	GAK (ENSPANG00000011910)	TMEM175 (ENSPANG00000020176)	ENSPANG00000016992	IDUA (ENSPANG00000007828) #9	FGFRL1 (ENSPANG00000040655) #10	RNF212 (ENSPANG00000011989) #11	SPON2 (ENSPANG00000013162) #13	CTBP1 (ENSPANG00000005494) #14	MAEA (ENSPANG00000024432) #15	UVSSA (ENSPANG00000019190) #16	NKX1-1 (ENSPANG00000035702) #17	FAM53A (ENSPANG00000020344) #18	SLBP (ENSPANG00000004932) #19	TMEM129 (ENSPANG00000005178) #20	TACC3 (ENSPANG00000007581) #21	FGFR3 (ENSPANG00000024533) #22	LETM1 (ENSPANG00000024554) #23	NSD2 (ENSPANG00000022789) #24	NELFA (ENSPANG00000019016) #25	ENSPANG00000029835	C4orf48 (ENSPANG00000006016) #26	POLN (ENSPANG00000000640) #28	HAUS3 (ENSPANG00000007327) #29	ENSPANG00000049266	MXD4 (ENSPANG00000024535) #30	ZFYVE28 (ENSPANG00000001128) #31	CFAP99 (ENSPANG00000034047) #32	RNF4 (ENSPANG00000013408)	FAM193A (ENSPANG00000006875) #33	TNIP2 (ENSPANG00000019351) #34	SH3BP2 (ENSPANG00000021586) #35
Cercopithecinae_d	ANCESTRAL SPECIES	85	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00960000188067	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00910000146990	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Drill	MODERN SPECIES	1719	DGKQ (ENSMLEG00000021202) #7	SLC26A1 (ENSMLEG00000037428) #8	IDUA (ENSMLEG00000040558) #9	FGFRL1 (ENSMLEG00000037900) #10	ENSMLEG00000028284	ENSMLEG00000032227 #12	SPON2 (ENSMLEG00000002232) #13	CTBP1 (ENSMLEG00000030520) #14	MAEA (ENSMLEG00000039505) #15	ENSMLEG00000038826	UVSSA (ENSMLEG00000007158) #16	FAM53A (ENSMLEG00000035332) #18	SLBP (ENSMLEG00000024639) #19	TMEM129 (ENSMLEG00000040279) #20	TACC3 (ENSMLEG00000010263) #21	FGFR3 (ENSMLEG00000030618) #22	ENSMLEG00000040964 #23	NSD2 (ENSMLEG00000037492) #24	NELFA (ENSMLEG00000031010) #25	C4orf48 (ENSMLEG00000032446) #26	ENSMLEG00000041510 #27	ENSMLEG00000032508	POLN (ENSMLEG00000038809) #28	HAUS3 (ENSMLEG00000035756) #29	MXD4 (ENSMLEG00000021543) #30	ZFYVE28 (ENSMLEG00000026808) #31	CFAP99 (ENSMLEG00000042081) #32	RNF4 (ENSMLEG00000038069)	ENSMLEG00000011279	FAM193A (ENSMLEG00000042643) #33	TNIP2 (ENSMLEG00000034847) #34
Sooty mangabey	MODERN SPECIES	649	IDUA (ENSCATG00000009650) #9	FGFRL1 (ENSCATG00000036121) #10	ENSCATG00000035612	ENSCATG00000044938	ENSCATG00000031977 #12	SPON2 (ENSCATG00000036451) #13	CTBP1 (ENSCATG00000035745) #14	MAEA (ENSCATG00000019101) #15	ENSCATG00000041571	UVSSA (ENSCATG00000010984) #16	NKX1-1 (ENSCATG00000042002) #17	FAM53A (ENSCATG00000044777) #18	SLBP (ENSCATG00000029173) #19	TMEM129 (ENSCATG00000029726) #20	TACC3 (ENSCATG00000029112) #21	FGFR3 (ENSCATG00000033697) #22	ENSCATG00000042406 #23	NSD2 (ENSCATG00000013442) #24	NELFA (ENSCATG00000036998) #25	C4orf48 (ENSCATG00000036109) #26	NAT8L (ENSCATG00000039077) #27	ENSCATG00000036129	POLN (ENSCATG00000038015) #28	HAUS3 (ENSCATG00000038591) #29	MXD4 (ENSCATG00000037468) #30	ZFYVE28 (ENSCATG00000043569) #31	CFAP99 (ENSCATG00000015552) #32	RNF4 (ENSCATG00000035992)	FAM193A (ENSCATG00000042635) #33	ENSCATG00000012185	SH3BP2 (ENSCATG00000032838) #35
Macaca	ANCESTRAL SPECIES	25	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00910000146990	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.h.h.a	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00910000146990	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.h.h.a	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Crab-eating macaque	MODERN SPECIES	15	DGKQ (ENSMFAG00000001042) #7	IDUA (ENSMFAG00000032030) #9	ENSMFAG00000039496	ENSMFAG00000002925 #10	RNF212 (ENSMFAG00000002719) #11	SPON2 (ENSMFAG00000050124) #13	CTBP1 (ENSMFAG00000000176) #14	MAEA (ENSMFAG00000001193) #15	UVSSA (ENSMFAG00000045124) #16	ENSMFAG00000030632	NKX1-1 (ENSMFAG00000002277) #17	FAM53A (ENSMFAG00000052796) #18	SLBP (ENSMFAG00000030130) #19	TMEM129 (ENSMFAG00000000493) #20	TACC3 (ENSMFAG00000043154) #21	FGFR3 (ENSMFAG00000032292) #22	LETM1 (ENSMFAG00000039886) #23	NSD2 (ENSMFAG00000031384) #24	NELFA (ENSMFAG00000035742) #25	ENSMFAG00000038719	C4orf48 (ENSMFAG00000001046) #26	ENSMFAG00000059887 #27	POLN (ENSMFAG00000032512) #28	ENSMFAG00000062209	HAUS3 (ENSMFAG00000034116) #29	ENSMFAG00000053887 #30	ZFYVE28 (ENSMFAG00000062429) #31	CFAP99 (ENSMFAG00000034253) #32	RNF4 (ENSMFAG00000050616)	FAM193A (ENSMFAG00000045259) #33	TNIP2 (ENSMFAG00000003617) #34
Rhesus	MODERN SPECIES	15	TMEM175 (ENSMMUG00000017221)	DGKQ (ENSMMUG00000017222) #7	IDUA (ENSMMUG00000057764) #9	SLC26A1 (ENSMMUG00000017223) #8	FGFRL1 (ENSMMUG00000032300) #10	RNF212 (ENSMMUG00000015507) #11	SPON2 (ENSMMUG00000020856) #13	CTBP1 (ENSMMUG00000008323) #14	MAEA (ENSMMUG00000008357) #15	UVSSA (ENSMMUG00000038497) #16	NKX1-1 (ENSMMUG00000051731) #17	FAM53A (ENSMMUG00000008363) #18	SLBP (ENSMMUG00000032303) #19	TMEM129 (ENSMMUG00000064450) #20	TACC3 (ENSMMUG00000011191) #21	FGFR3 (ENSMMUG00000019945) #22	LETM1 (ENSMMUG00000019948) #23	NSD2 (ENSMMUG00000046942) #24	NELFA (ENSMMUG00000009944) #25	ENSMMUG00000003234	CKQ732225.1H4orf48 (ENSMMUG00000032304) #26	POLN (ENSMMUG00000001156) #28	ENSMMUG00000055448	MXD4 (ENSMMUG00000048558) #30	ZFYVE28 (ENSMMUG00000032306) #31	CFAP99 (ENSMMUG00000040759) #32	RNF4 (ENSMMUG00000007948)	FAM193A (ENSMMUG00000013158) #33	TNIP2 (ENSMMUG00000007966) #34	SH3BP2 (ENSMMUG00000014335) #35	ADD1 (ENSMMUG00000008379) #36
Pig-tailed macaque	MODERN SPECIES	590	SLC26A1 (ENSMNEG00000037199) #8	IDUA (ENSMNEG00000036273) #9	FGFRL1 (ENSMNEG00000028620) #10	ENSMNEG00000036883 #11	ENSMNEG00000042968 #12	SPON2 (ENSMNEG00000034158) #13	CTBP1 (ENSMNEG00000037787) #14	MAEA (ENSMNEG00000028551) #15	UVSSA (ENSMNEG00000034877) #16	ENSMNEG00000027696	NKX1-1 (ENSMNEG00000036214) #17	FAM53A (ENSMNEG00000036030) #18	SLBP (ENSMNEG00000008082) #19	TMEM129 (ENSMNEG00000038437) #20	TACC3 (ENSMNEG00000041051) #21	FGFR3 (ENSMNEG00000043249) #22	ENSMNEG00000038507 #23	NSD2 (ENSMNEG00000030530) #24	NELFA (ENSMNEG00000029249) #25	ENSMNEG00000040986	C4orf48 (ENSMNEG00000044160) #26	NAT8L (ENSMNEG00000029002) #27	POLN (ENSMNEG00000044077) #28	ENSMNEG00000034392	HAUS3 (ENSMNEG00000031199) #29	MXD4 (ENSMNEG00000036831) #30	ZFYVE28 (ENSMNEG00000039840) #31	CFAP99 (ENSMNEG00000030381) #32	RNF4 (ENSMNEG00000035146)	FAM193A (ENSMNEG00000045102) #33	TNIP2 (ENSMNEG00000045051) #34
Rhinopithecus	ANCESTRAL SPECIES	135												ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.g #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000000703.g.a.c.b	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT01080000257748.b	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33
Golden snub-nosed monkey	MODERN SPECIES	2481												FAM53A (ENSRROG00000028469) #18	SLBP (ENSRROG00000030081) #19	TMEM129 (ENSRROG00000041532) #20	TACC3 (ENSRROG00000039140) #21	FGFR3 (ENSRROG00000042585) #22	LETM1 (ENSRROG00000038867) #23	NSD2 (ENSRROG00000033896) #24	NELFA (ENSRROG00000040024) #25	ENSRROG00000017138	C4orf48 (ENSRROG00000029831) #26	ENSRROG00000020413 #27	POLN (ENSRROG00000045711) #28	ENSRROG00000031302	HAUS3 (ENSRROG00000033454) #29	MXD4 (ENSRROG00000040089) #30	ZFYVE28 (ENSRROG00000026858) #31	CFAP99 (ENSRROG00000041025) #32	RNF4 (ENSRROG00000038892)	FAM193A (ENSRROG00000033008) #33	TNIP2 (ENSRROG00000045312) #34
Black snub-nosed monkey	MODERN SPECIES	539												FAM53A (ENSRBIG00000036916) #18	SLBP (ENSRBIG00000039159) #19	TMEM129 (ENSRBIG00000015368) #20	TACC3 (ENSRBIG00000042233) #21	FGFR3 (ENSRBIG00000040633) #22	LETM1 (ENSRBIG00000038284) #23	NSD2 (ENSRBIG00000043171) #24	NELFA (ENSRBIG00000031633) #25	ENSRBIG00000037817	C4orf48 (ENSRBIG00000037248) #26	ENSRBIG00000044373 #27	POLN (ENSRBIG00000007947) #28	ENSRBIG00000041367	HAUS3 (ENSRBIG00000037222) #29	MXD4 (ENSRBIG00000043500) #30	ZFYVE28 (ENSRBIG00000020333) #31	CFAP99 (ENSRBIG00000035346) #32	RNF4 (ENSRBIG00000027423)	CDCP1 (ENSRBIG00000030951)	CLEC3B (ENSRBIG00000039337)
Hominoidea	ANCESTRAL SPECIES	10	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00910000148485	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.i #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.u	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Gibbon	MODERN SPECIES	12	SLC26A1 (ENSNLEG00000000982) #8	IDUA (ENSNLEG00000000973) #9	ENSNLEG00000000991 #10	ENSNLEG00000000998	ENSNLEG00000035394 #12	SPON2 (ENSNLEG00000001006) #13	CTBP1 (ENSNLEG00000001055) #14	MAEA (ENSNLEG00000001060) #15	UVSSA (ENSNLEG00000001082) #16	ENSNLEG00000001097	FAM53A (ENSNLEG00000000044) #18	SLBP (ENSNLEG00000000048) #19	ENSNLEG00000034209 #20	ENSNLEG00000035802	TACC3 (ENSNLEG00000000057) #21	ENSNLEG00000000063 #22	LETM1 (ENSNLEG00000000067) #23	NSD2 (ENSNLEG00000000081) #24	ENSNLEG00000000120 #25	ENSNLEG00000030858 #26	ENSNLEG00000035664 #27	ENSNLEG00000000145 #29	POLN (ENSNLEG00000000132) #28	ENSNLEG00000036277	ENSNLEG00000000149 #30	ZFYVE28 (ENSNLEG00000000151) #31	ENSNLEG00000000154 #32	ENSNLEG00000034085	ENSNLEG00000031900	FAM193A (ENSNLEG00000000167) #33	ENSNLEG00000000191 #34
Hominidae	ANCESTRAL SPECIES	12	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00910000148485	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.i #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.u	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Orangutan	MODERN SPECIES	17	IDUA (ENSPPYG00000014514) #9	SLC26A1 (ENSPPYG00000014515) #8	FGFRL1 (ENSPPYG00000040964) #10	ENSPPYG00000014517 #11	ENSPPYG00000014518 #12	SPON2 (ENSPPYG00000014522) #13	CTBP1 (ENSPPYG00000014524) #14	ENSPPYG00000038782	MAEA (ENSPPYG00000014525) #15	UVSSA (ENSPPYG00000014526) #16	NKX1-1 (ENSPPYG00000041138) #17	FAM53A (ENSPPYG00000014528) #18	ENSPPYG00000014529 #19	TMEM129 (ENSPPYG00000014530) #20	TACC3 (ENSPPYG00000014531) #21	FGFR3 (ENSPPYG00000014532) #22	LETM1 (ENSPPYG00000014533) #23	NSD2 (ENSPPYG00000014534) #24	NELFA (ENSPPYG00000014535) #25	ENSPPYG00000014536 #26	NAT8L (ENSPPYG00000014537) #27	POLN (ENSPPYG00000014538) #28	ENSPPYG00000040447	ENSPPYG00000014539 #29	ENSPPYG00000036280	ENSPPYG00000037498 #30	ZFYVE28 (ENSPPYG00000014542) #31	CFAP99 (ENSPPYG00000040137) #32	RNF4 (ENSPPYG00000025865)	FAM193A (ENSPPYG00000014544) #33	TNIP2 (ENSPPYG00000014545) #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00910000148485	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.i #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.u	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Gorilla	MODERN SPECIES	17	DGKQ (ENSGGOG00000010295) #7	SLC26A1 (ENSGGOG00000010333) #8	IDUA (ENSGGOG00000010322) #9	FGFRL1 (ENSGGOG00000010340) #10	RNF212 (ENSGGOG00000023243) #11	ENSGGOG00000007686 #12	SPON2 (ENSGGOG00000002707) #13	CTBP1 (ENSGGOG00000010541) #14	ENSGGOG00000036321	MAEA (ENSGGOG00000004866) #15	UVSSA (ENSGGOG00000004872) #16	FAM53A (ENSGGOG00000003163) #18	SLBP (ENSGGOG00000003167) #19	TMEM129 (ENSGGOG00000039598) #20	TACC3 (ENSGGOG00000041158) #21	FGFR3 (ENSGGOG00000015081) #22	LETM1 (ENSGGOG00000002923) #23	NSD2 (ENSGGOG00000014144) #24	NELFA (ENSGGOG00000014161) #25	ENSGGOG00000041239 #26	ENSGGOG00000037682 #27	POLN (ENSGGOG00000006832) #28	ENSGGOG00000015700	HAUS3 (ENSGGOG00000000744) #29	MXD4 (ENSGGOG00000000747) #30	ZFYVE28 (ENSGGOG00000000748) #31	CFAP99 (ENSGGOG00000041964) #32	RNF4 (ENSGGOG00000036446)	ENSGGOG00000025865	SH3BP2 (ENSGGOG00000014162) #35	ADD1 (ENSGGOG00000007407) #36
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00910000148485	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.i #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.u	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Human	MODERN SPECIES	16	TMEM175 (ENSG00000127419)	DGKQ (ENSG00000145214) #7	SLC26A1 (ENSG00000145217) #8	IDUA (ENSG00000127415) #9	FGFRL1 (ENSG00000127418) #10	RNF212 (ENSG00000178222) #11	SPON2 (ENSG00000159674) #13	CTBP1 (ENSG00000159692) #14	MAEA (ENSG00000090316) #15	UVSSA (ENSG00000163945) #16	NKX1-1 (ENSG00000235608) #17	FAM53A (ENSG00000174137) #18	SLBP (ENSG00000163950) #19	TACC3 (ENSG00000013810) #21	TMEM129 (ENSG00000168936) #20	FGFR3 (ENSG00000068078) #22	LETM1 (ENSG00000168924) #23	NSD2 (ENSG00000109685) #24	NELFA (ENSG00000185049) #25	C4orf48 (ENSG00000243449) #26	NAT8L (ENSG00000185818) #27	POLN (ENSG00000130997) #28	HAUS3 (ENSG00000214367) #29	MXD4 (ENSG00000123933) #30	ZFYVE28 (ENSG00000159733) #31	CFAP99 (ENSG00000206113) #32	RNF4 (ENSG00000063978)	FAM193A (ENSG00000125386) #33	TNIP2 (ENSG00000168884) #34	SH3BP2 (ENSG00000087266) #35	ADD1 (ENSG00000087274) #36
Pan	ANCESTRAL SPECIES	7	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00910000147922	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00910000148485	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a.i #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00650000094590	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.u	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Bonobo	MODERN SPECIES	17	SLC26A1 (ENSPPAG00000034145) #8	IDUA (ENSPPAG00000032304) #9	FGFRL1 (ENSPPAG00000033720) #10	RNF212 (ENSPPAG00000043537) #11	ENSPPAG00000033770 #12	SPON2 (ENSPPAG00000038791) #13	CTBP1 (ENSPPAG00000032870) #14	ENSPPAG00000016070	ENSPPAG00000017524 #15	UVSSA (ENSPPAG00000039158) #16	FAM53A (ENSPPAG00000001687) #18	SLBP (ENSPPAG00000033300) #19	TMEM129 (ENSPPAG00000032640) #20	TACC3 (ENSPPAG00000041213) #21	ENSPPAG00000039682	FGFR3 (ENSPPAG00000034154) #22	LETM1 (ENSPPAG00000022259) #23	NSD2 (ENSPPAG00000028888) #24	NELFA (ENSPPAG00000039571) #25	ENSPPAG00000040365 #26	ENSPPAG00000033617 #27	POLN (ENSPPAG00000042877) #28	ENSPPAG00000026673	HAUS3 (ENSPPAG00000032988) #29	ENSPPAG00000042591 #30	ZFYVE28 (ENSPPAG00000013584) #31	CFAP99 (ENSPPAG00000035753) #32	RNF4 (ENSPPAG00000035112)	FAM193A (ENSPPAG00000039176) #33	ENSPPAG00000035246 #34	SH3BP2 (ENSPPAG00000036464) #35
Chimpanzee	MODERN SPECIES	17	SLC26A1 (ENSPTRG00000015818) #8	IDUA (ENSPTRG00000015819) #9	FGFRL1 (ENSPTRG00000049998) #10	RNF212 (ENSPTRG00000015822) #11	ENSPTRG00000045674 #12	SPON2 (ENSPTRG00000015825) #13	CTBP1 (ENSPTRG00000015827) #14	ENSPTRG00000049092	MAEA (ENSPTRG00000015829) #15	UVSSA (ENSPTRG00000015830) #16	NKX1-1 (ENSPTRG00000041220) #17	FAM53A (ENSPTRG00000015831) #18	SLBP (ENSPTRG00000015832) #19	TMEM129 (ENSPTRG00000015833) #20	TACC3 (ENSPTRG00000015834) #21	FGFR3 (ENSPTRG00000015836) #22	LETM1 (ENSPTRG00000015837) #23	NSD2 (ENSPTRG00000015838) #24	NELFA (ENSPTRG00000015840) #25	C4H4orf48 (ENSPTRG00000031284) #26	NAT8L (ENSPTRG00000047587) #27	POLN (ENSPTRG00000034296) #28	ENSPTRG00000052565	HAUS3 (ENSPTRG00000015843) #29	MXD4 (ENSPTRG00000015844) #30	ZFYVE28 (ENSPTRG00000015845) #31	CFAP99 (ENSPTRG00000039939) #32	RNF4 (ENSPTRG00000046370)	FAM193A (ENSPTRG00000015847) #33	TNIP2 (ENSPTRG00000015848) #34	SH3BP2 (ENSPTRG00000046864) #35
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342.j #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.w	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mas night monkey	MODERN SPECIES	1118	MSANTD1 (ENSANAG00000037096)	HTT (ENSANAG00000031258)	ENSANAG00000035544	NOP14 (ENSANAG00000022601)	ENSANAG00000026094	ADD1 (ENSANAG00000019463) #36	SH3BP2 (ENSANAG00000033091) #35	CTBP1 (ENSANAG00000027809) #14	MAEA (ENSANAG00000036521) #15	UVSSA (ENSANAG00000020676) #16	NKX1-1 (ENSANAG00000034667) #17	FAM53A (ENSANAG00000022971) #18	SLBP (ENSANAG00000034769) #19	TMEM129 (ENSANAG00000036729) #20	TACC3 (ENSANAG00000028183) #21	FGFR3 (ENSANAG00000026958) #22	LETM1 (ENSANAG00000037304) #23	NSD2 (ENSANAG00000035180) #24	NELFA (ENSANAG00000027096) #25	C4orf48 (ENSANAG00000032965) #26	NAT8L (ENSANAG00000026210) #27	POLN (ENSANAG00000025375) #28	HAUS3 (ENSANAG00000029444) #29	MXD4 (ENSANAG00000026969) #30	ENSANAG00000026828 #31	ENSANAG00000037948 #31	CFAP99 (ENSANAG00000029171) #32	RNF4 (ENSANAG00000034781)	FAM193A (ENSANAG00000032586) #33	TNIP2 (ENSANAG00000033040) #34
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342.j #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.w	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Marmoset	MODERN SPECIES	15	TMEM175 (ENSCJAG00000001891)	DGKQ (ENSCJAG00000001866) #7	SLC26A1 (ENSCJAG00000001864) #8	IDUA (ENSCJAG00000001838) #9	FGFRL1 (ENSCJAG00000001812) #10	ENSCJAG00000082677	ENSCJAG00000012473 #12	SPON2 (ENSCJAG00000048623) #13	ENSCJAG00000001565 #14	MAEA (ENSCJAG00000078979) #15	UVSSA (ENSCJAG00000041289) #16	NKX1-1 (ENSCJAG00000079323) #17	FAM53A (ENSCJAG00000001781) #18	SLBP (ENSCJAG00000001790) #19	TACC3 (ENSCJAG00000001805) #21	FGFR3 (ENSCJAG00000001819) #22	ENSCJAG00000059838	LETM1 (ENSCJAG00000001859) #23	NSD2 (ENSCJAG00000001876) #24	NELFA (ENSCJAG00000039975) #25	C4orf48 (ENSCJAG00000044010) #26	NAT8L (ENSCJAG00000014504) #27	HAUS3 (ENSCJAG00000036903) #29	MXD4 (ENSCJAG00000066421) #30	ZFYVE28 (ENSCJAG00000038192) #31	CFAP99 (ENSCJAG00000038947) #32	RNF4 (ENSCJAG00000014371)	ENSCJAG00000057846	FAM193A (ENSCJAG00000014343) #33	TNIP2 (ENSCJAG00000014338) #34	SH3BP2 (ENSCJAG00000014306) #35
Cebidae_a	ANCESTRAL SPECIES	34	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342.j #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.x	ENSGT00390000010318.w	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Bolivian squirrel monkey	MODERN SPECIES	108	TMEM175 (ENSSBOG00000023050)	DGKQ (ENSSBOG00000028901) #7	SLC26A1 (ENSSBOG00000030545) #8	IDUA (ENSSBOG00000024010) #9	FGFRL1 (ENSSBOG00000030072) #10	ENSSBOG00000026401	ENSSBOG00000018159 #12	SPON2 (ENSSBOG00000031498) #13	CTBP1 (ENSSBOG00000009891) #14	MAEA (ENSSBOG00000030338) #15	ENSSBOG00000029534 #16	FAM53A (ENSSBOG00000034926) #18	SLBP (ENSSBOG00000033897) #19	TMEM129 (ENSSBOG00000035214) #20	TACC3 (ENSSBOG00000022484) #21	FGFR3 (ENSSBOG00000028613) #22	LETM1 (ENSSBOG00000027558) #23	NSD2 (ENSSBOG00000020624) #24	NELFA (ENSSBOG00000024481) #25	ENSSBOG00000021831 #27	POLN (ENSSBOG00000029730) #28	HAUS3 (ENSSBOG00000035151) #29	MXD4 (ENSSBOG00000020590) #30	ZFYVE28 (ENSSBOG00000024678) #31	CFAP99 (ENSSBOG00000026143) #32	ENSSBOG00000010070	RNF4 (ENSSBOG00000031127)	FAM193A (ENSSBOG00000035392) #33	ENSSBOG00000028277	SH3BP2 (ENSSBOG00000004638) #35	ADD1 (ENSSBOG00000032628) #36
Capuchin	MODERN SPECIES	117	DGKQ (ENSCCAG00000030615) #7	SLC26A1 (ENSCCAG00000026035) #8	IDUA (ENSCCAG00000007900) #9	FGFRL1 (ENSCCAG00000032864) #10	RNF212 (ENSCCAG00000037676) #11	ENSCCAG00000025209 #12	SPON2 (ENSCCAG00000032899) #13	CTBP1 (ENSCCAG00000037066) #14	ENSCCAG00000022660 #15	UVSSA (ENSCCAG00000032486) #16	NKX1-1 (ENSCCAG00000034329) #17	FAM53A (ENSCCAG00000005420) #18	SLBP (ENSCCAG00000026134) #19	TMEM129 (ENSCCAG00000021775) #20	TACC3 (ENSCCAG00000037097) #21	FGFR3 (ENSCCAG00000029787) #22	LETM1 (ENSCCAG00000022623) #23	NSD2 (ENSCCAG00000036562) #24	NELFA (ENSCCAG00000025280) #25	C4orf48 (ENSCCAG00000016052) #26	NAT8L (ENSCCAG00000033445) #27	POLN (ENSCCAG00000026095) #28	HAUS3 (ENSCCAG00000037575) #29	MXD4 (ENSCCAG00000026915) #30	ZFYVE28 (ENSCCAG00000019800) #31	ADRA2C (ENSCCAG00000033349)	ENSCCAG00000035547	HMX1 (ENSCCAG00000029215)	ENSCCAG00000031132	CPZ (ENSCCAG00000037917)	GPR78 (ENSCCAG00000023119)
Tarsier	MODERN SPECIES	1478																FGFR3 (ENSTSYG00000032651) #22	LETM1 (ENSTSYG00000006649) #23
Strepsirrhini	ANCESTRAL SPECIES	40	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Lemuriformes_a	ANCESTRAL SPECIES	115																ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000158146	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Greater bamboo lemur	MODERN SPECIES	1156																FGFR3 (ENSPSMG00000023299) #22	ENSPSMG00000023435 #23
Coquerels sifaka	MODERN SPECIES	974																FGFR3 (ENSPCOG00000026602) #22	LETM1 (ENSPCOG00000023114) #23	ENSPCOG00000022691	NSD2 (ENSPCOG00000020060) #24	NELFA (ENSPCOG00000015588) #25	C4orf48 (ENSPCOG00000022022) #26	NAT8L (ENSPCOG00000020575) #27	POLN (ENSPCOG00000028057) #28	HAUS3 (ENSPCOG00000019768) #29	MXD4 (ENSPCOG00000018116) #30	ZFYVE28 (ENSPCOG00000018385) #31	CFAP99 (ENSPCOG00000015631) #32
Mouse lemur	MODERN SPECIES	9	IDUA (ENSMICG00000012938) #9	FGFRL1 (ENSMICG00000030053) #10	RNF212 (ENSMICG00000047687) #11	ENSMICG00000033680	ENSMICG00000036701 #12	SPON2 (ENSMICG00000002454) #13	CTBP1 (ENSMICG00000012941) #14	MAEA (ENSMICG00000012953) #15	UVSSA (ENSMICG00000012963) #16	ENSMICG00000044932	NKX1-1 (ENSMICG00000042887) #17	FAM53A (ENSMICG00000044027) #18	SLBP (ENSMICG00000014244) #19	TMEM129 (ENSMICG00000014263) #20	ENSMICG00000033578	FGFR3 (ENSMICG00000008153) #22	LETM1 (ENSMICG00000008169) #23	NSD2 (ENSMICG00000011335) #24	NELFA (ENSMICG00000011366) #25	C4orf48 (ENSMICG00000046656) #26	NAT8L (ENSMICG00000045400) #27	POLN (ENSMICG00000047538) #28	HAUS3 (ENSMICG00000028831) #29	MXD4 (ENSMICG00000047939) #30	ZFYVE28 (ENSMICG00000031619) #31	CFAP99 (ENSMICG00000036187) #32	RNF4 (ENSMICG00000041515)	FAM193A (ENSMICG00000008863) #33	TNIP2 (ENSMICG00000008835) #34	SH3BP2 (ENSMICG00000002298) #35	ENSMICG00000030984
Bushbaby	MODERN SPECIES	313	TMEM175 (ENSOGAG00000015589)	DGKQ (ENSOGAG00000015595) #7	IDUA (ENSOGAG00000015603) #9	SLC26A1 (ENSOGAG00000015601) #8	FGFRL1 (ENSOGAG00000015610) #10	ENSOGAG00000030464 #12	SPON2 (ENSOGAG00000006366) #13	CTBP1 (ENSOGAG00000006367) #14	MAEA (ENSOGAG00000006370) #15	UVSSA (ENSOGAG00000006373) #16	NKX1-1 (ENSOGAG00000034822) #17	ENSOGAG00000014882	SLBP (ENSOGAG00000009750) #19	TMEM129 (ENSOGAG00000014873) #20	TACC3 (ENSOGAG00000014875) #21	FGFR3 (ENSOGAG00000025157) #22	ENSOGAG00000014883 #23	NSD2 (ENSOGAG00000014890) #24	NELFA (ENSOGAG00000029627) #25	C4orf48 (ENSOGAG00000031277) #26	NAT8L (ENSOGAG00000026595) #27	POLN (ENSOGAG00000011299) #28	HAUS3 (ENSOGAG00000032569) #29	MXD4 (ENSOGAG00000011305) #30	ZFYVE28 (ENSOGAG00000011309) #31	RNF4 (ENSOGAG00000010776)	FAM193A (ENSOGAG00000012386) #33	TNIP2 (ENSOGAG00000012391) #34	SH3BP2 (ENSOGAG00000008463) #35	ADD1 (ENSOGAG00000011061) #36	MFSD10 (ENSOGAG00000011069) #37
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Tree shrew	MODERN SPECIES	3160														SLBP (ENSTBEG00000004085) #19	TMEM129 (ENSTBEG00000004388) #20	ENSTBEG00000004759 #22	LETM1 (ENSTBEG00000006309) #23
Glires	ANCESTRAL SPECIES	8	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000159880 #22
Pika	MODERN SPECIES	9336																FGFR3 (ENSOPRG00000002205) #22
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000171945	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000154110.a	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000170970	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Chinese hamster chok1gshd	MODERN SPECIES	44	Pisd (ENSCGRG00001024345)	Prr14l (ENSCGRG00001016693)	Depdc5 (ENSCGRG00001024582)	Ywhah (ENSCGRG00001020682)	Slc5a1 (ENSCGRG00001023507)	Spon2 (ENSCGRG00001018510) #13	Ctbp1 (ENSCGRG00001000660) #14	ENSCGRG00001024773	Maea (ENSCGRG00001001581) #15	Uvssa (ENSCGRG00001002995) #16	Nkx1-1 (ENSCGRG00001013497) #17	Fam53a (ENSCGRG00001022457) #18	ENSCGRG00001009760 #19	Tmem129 (ENSCGRG00001014269) #20	Tacc3 (ENSCGRG00001022858) #21	Fgfr3 (ENSCGRG00001014679) #22	Letm1 (ENSCGRG00001022378) #23	ENSCGRG00001022523	Nsd2 (ENSCGRG00001008668) #24	Nelfa (ENSCGRG00001018745) #25	Gm1673 (ENSCGRG00001020043) #26	Nat8l (ENSCGRG00001023978) #27	Poln (ENSCGRG00001007876) #28	Haus3 (ENSCGRG00001006121) #29	Mxd4 (ENSCGRG00001011783) #30	Zfyve28 (ENSCGRG00001015693) #31	Cfap99 (ENSCGRG00001018964) #32	Rnf4 (ENSCGRG00001022472)	Fam193a (ENSCGRG00001011437) #33	Tnip2 (ENSCGRG00001018278) #34	Sh3bp2 (ENSCGRG00001023205) #35
Golden Hamster	MODERN SPECIES	632	Drg1 (ENSMAUG00000018239)	Eif4enif1 (ENSMAUG00000002370)	Sfi1 (ENSMAUG00000007963)	ENSMAUG00000002955	Depdc5 (ENSMAUG00000003792)	Slc5a1 (ENSMAUG00000014523)	Spon2 (ENSMAUG00000009554) #13	Ctbp1 (ENSMAUG00000018160) #14	ENSMAUG00000011117	Uvssa (ENSMAUG00000017816) #16	Nkx1-1 (ENSMAUG00000013123) #17	Fam53a (ENSMAUG00000018409) #18	Slbp (ENSMAUG00000009490) #19	Tmem129 (ENSMAUG00000013066) #20	Tacc3 (ENSMAUG00000008651) #21	Fgfr3 (ENSMAUG00000012735) #22	Letm1 (ENSMAUG00000007831) #23	Nsd2 (ENSMAUG00000015700) #24	Nelfa (ENSMAUG00000022097) #25	Gm1673 (ENSMAUG00000019500) #26	ENSMAUG00000020607 #27	Poln (ENSMAUG00000008534) #28	Haus3 (ENSMAUG00000000818) #29	Mxd4 (ENSMAUG00000014477) #30	ENSMAUG00000016411 #31	Cfap99 (ENSMAUG00000018621) #32	Rnf4 (ENSMAUG00000022006)	Fam193a (ENSMAUG00000013458) #33	Tnip2 (ENSMAUG00000000863) #34	Sh3bp2 (ENSMAUG00000014154) #35	Add1 (ENSMAUG00000010417) #36
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000154110.a	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Prairie vole	MODERN SPECIES	89	Eif4enif1 (ENSMOCG00000020588)	Sfi1 (ENSMOCG00000014552)	Pisd (ENSMOCG00000017891)	ENSMOCG00000003569	Depdc5 (ENSMOCG00000013118)	Ywhah (ENSMOCG00000015489)	Spon2 (ENSMOCG00000009741) #13	Ctbp1 (ENSMOCG00000015873) #14	Maea (ENSMOCG00000014476) #15	Uvssa (ENSMOCG00000021608) #16	Nkx1-1 (ENSMOCG00000000592) #17	Fam53a (ENSMOCG00000009866) #18	Slbp (ENSMOCG00000015826) #19	Tmem129 (ENSMOCG00000020389) #20	Tacc3 (ENSMOCG00000008214) #21	Fgfr3 (ENSMOCG00000013655) #22	Letm1 (ENSMOCG00000012830) #23	Nsd2 (ENSMOCG00000008250) #24	Nelfa (ENSMOCG00000000669) #25	Gm1673 (ENSMOCG00000020620) #26	Nat8l (ENSMOCG00000017447) #27	Poln (ENSMOCG00000009309) #28	Pcdh20 (ENSMOCG00000008392)	Tdrd3 (ENSMOCG00000012962)	Diaph3 (ENSMOCG00000012431)	ENSMOCG00000011873	Pcdh17 (ENSMOCG00000004856)	ENSMOCG00000019804	Olfm4 (ENSMOCG00000016963)	Pcdh8 (ENSMOCG00000020531)	Cnmd (ENSMOCG00000001113)
Northern American deer mouse	MODERN SPECIES	1	Pisd (ENSPEMG00000009121)	ENSPEMG00000011362	Depdc5 (ENSPEMG00000017938)	ENSPEMG00000024597	Slc5a1 (ENSPEMG00000018099)	ENSPEMG00000030935	Spon2 (ENSPEMG00000012059) #13	Ctbp1 (ENSPEMG00000018643) #14	Maea (ENSPEMG00000009131) #15	Uvssa (ENSPEMG00000010756) #16	Nkx1-1 (ENSPEMG00000016893) #17	Fam53a (ENSPEMG00000008959) #18	Slbp (ENSPEMG00000018369) #19	Tmem129 (ENSPEMG00000000690) #20	Tacc3 (ENSPEMG00000012388) #21	Fgfr3 (ENSPEMG00000006894) #22	Letm1 (ENSPEMG00000000609) #23	Nsd2 (ENSPEMG00000017277) #24	Nelfa (ENSPEMG00000016134) #25	Gm1673 (ENSPEMG00000017743) #26	ENSPEMG00000026053 #27	Poln (ENSPEMG00000008981) #28	Mxd4 (ENSPEMG00000015018) #30	Zfyve28 (ENSPEMG00000003088) #31	Cfap99 (ENSPEMG00000000404) #32	Rnf4 (ENSPEMG00000017150)	Fam193a (ENSPEMG00000000297) #33	Tnip2 (ENSPEMG00000013340) #34	Sh3bp2 (ENSPEMG00000015767) #35	Add1 (ENSPEMG00000008717) #36	ENSPEMG00000011931
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000171945	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mus	ANCESTRAL SPECIES	14	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00860000135700	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00860000135700	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00860000135700	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mouse	MODERN SPECIES	14	Yes1 (ENSMUSG00000014932)	Pisd (ENSMUSG00000023452)	Prr14l (ENSMUSG00000054280)	Depdc5 (ENSMUSG00000037426)	Ywhah (ENSMUSG00000018965)	Slc5a1 (ENSMUSG00000011034)	Spon2 (ENSMUSG00000037379) #13	Ctbp1 (ENSMUSG00000037373) #14	Maea (ENSMUSG00000079562) #15	Uvssa (ENSMUSG00000037355) #16	Nkx1-1 (ENSMUSG00000029112) #17	Fam53a (ENSMUSG00000037339) #18	Slbp (ENSMUSG00000004642) #19	Tmem129 (ENSMUSG00000019295) #20	Tacc3 (ENSMUSG00000037313) #21	Fgfr3 (ENSMUSG00000054252) #22	Letm1 (ENSMUSG00000005299) #23	Nsd2 (ENSMUSG00000057406) #24	Nelfa (ENSMUSG00000029111) #25	Gm1673 (ENSMUSG00000070858) #26	Nat8l (ENSMUSG00000048142) #27	Poln (ENSMUSG00000045102) #28	Haus3 (ENSMUSG00000079555) #29	Mxd4 (ENSMUSG00000037235) #30	Zfyve28 (ENSMUSG00000037224) #31	Cfap99 (ENSMUSG00000109572) #32	Rnf4 (ENSMUSG00000029110)	Fam193a (ENSMUSG00000037210) #33	Tnip2 (ENSMUSG00000059866) #34	Sh3bp2 (ENSMUSG00000054520) #35	Add1 (ENSMUSG00000029106) #36
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00860000135700	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Steppe mouse	MODERN SPECIES	3132			Depdc5 (ENSMSIG00000019758)	Ywhah (ENSMSIG00000020077)	Slc5a1 (ENSMSIG00000020102)	Spon2 (ENSMSIG00000020130) #13	ENSMSIG00000020152 #14	Maea (ENSMSIG00000020294) #15	Uvssa (ENSMSIG00000020327) #16	Nkx1-1 (ENSMSIG00000020362) #17	Fam53a (ENSMSIG00000020370) #18	ENSMSIG00000020391	Slbp (ENSMSIG00000020394) #19	Tmem129 (ENSMSIG00000020453) #20	ENSMSIG00000020463 #21	Fgfr3 (ENSMSIG00000020478) #22	Letm1 (ENSMSIG00000020902) #23	Nsd2 (ENSMSIG00000020943) #24	Nelfa (ENSMSIG00000021131) #25	ENSMSIG00000021161 #26	Nat8l (ENSMSIG00000021182) #27	Poln (ENSMSIG00000021195) #28	Haus3 (ENSMSIG00000021389) #29	ENSMSIG00000021408 #30	ENSMSIG00000021448	Zfyve28 (ENSMSIG00000021454) #31	Cfap99 (ENSMSIG00000021491) #32	ENSMSIG00000021509	ENSMSIG00000021525	Fam193a (ENSMSIG00000021548) #33	Tnip2 (ENSMSIG00000021599) #34
spretus	MODERN SPECIES	14	Pisd (MGP_SPRETEiJ_G0028101)	MGP_SPRETEiJ_G0028102	Depdc5 (MGP_SPRETEiJ_G0028103)	Ywhah (MGP_SPRETEiJ_G0028104)	Slc5a1 (MGP_SPRETEiJ_G0028105)	Spon2 (MGP_SPRETEiJ_G0028106) #13	Ctbp1 (MGP_SPRETEiJ_G0028107) #14	Maea (MGP_SPRETEiJ_G0028108) #15	Uvssa (MGP_SPRETEiJ_G0028109) #16	Nkx1-1 (MGP_SPRETEiJ_G0028110) #17	Fam53a (MGP_SPRETEiJ_G0028111) #18	MGP_SPRETEiJ_G0028112	Slbp (MGP_SPRETEiJ_G0028113) #19	Tmem129 (MGP_SPRETEiJ_G0028114) #20	Tacc3 (MGP_SPRETEiJ_G0028115) #21	Fgfr3 (MGP_SPRETEiJ_G0028116) #22	Letm1 (MGP_SPRETEiJ_G0028117) #23	Nsd2 (MGP_SPRETEiJ_G0028118) #24	Nelfa (MGP_SPRETEiJ_G0028119) #25	MGP_SPRETEiJ_G0028120 #26	Nat8l (MGP_SPRETEiJ_G0028121) #27	Poln (MGP_SPRETEiJ_G0028122) #28	Haus3 (MGP_SPRETEiJ_G0028123) #29	Mxd4 (MGP_SPRETEiJ_G0028124) #30	Zfyve28 (MGP_SPRETEiJ_G0028125) #31	Cfap99 (MGP_SPRETEiJ_G0028126) #32	Rnf4 (MGP_SPRETEiJ_G0028127)	Fam193a (MGP_SPRETEiJ_G0028128) #33	Tnip2 (MGP_SPRETEiJ_G0028129) #34	Sh3bp2 (MGP_SPRETEiJ_G0028130) #35	Add1 (MGP_SPRETEiJ_G0028131) #36
Ryukyu mouse	MODERN SPECIES	14	MGP_CAROLIEiJ_G0027105	Prr14l (MGP_CAROLIEiJ_G0027106)	Depdc5 (MGP_CAROLIEiJ_G0027107)	MGP_CAROLIEiJ_G0027108	Slc5a1 (MGP_CAROLIEiJ_G0027109)	Spon2 (MGP_CAROLIEiJ_G0027110) #13	Ctbp1 (MGP_CAROLIEiJ_G0027111) #14	Maea (MGP_CAROLIEiJ_G0027112) #15	Uvssa (MGP_CAROLIEiJ_G0027113) #16	Nkx1-1 (MGP_CAROLIEiJ_G0027114) #17	Fam53a (MGP_CAROLIEiJ_G0027115) #18	MGP_CAROLIEiJ_G0027116	Slbp (MGP_CAROLIEiJ_G0027117) #19	Tmem129 (MGP_CAROLIEiJ_G0027118) #20	Tacc3 (MGP_CAROLIEiJ_G0027119) #21	Fgfr3 (MGP_CAROLIEiJ_G0027120) #22	Letm1 (MGP_CAROLIEiJ_G0027121) #23	Nsd2 (MGP_CAROLIEiJ_G0027122) #24	Nelfa (MGP_CAROLIEiJ_G0027123) #25	MGP_CAROLIEiJ_G0027124 #26	Nat8l (MGP_CAROLIEiJ_G0027125) #27	Poln (MGP_CAROLIEiJ_G0027126) #28	Haus3 (MGP_CAROLIEiJ_G0027127) #29	Mxd4 (MGP_CAROLIEiJ_G0027128) #30	Zfyve28 (MGP_CAROLIEiJ_G0027129) #31	Cfap99 (MGP_CAROLIEiJ_G0027130) #32	Rnf4 (MGP_CAROLIEiJ_G0027131)	Fam193a (MGP_CAROLIEiJ_G0027132) #33	Tnip2 (MGP_CAROLIEiJ_G0027133) #34	Sh3bp2 (MGP_CAROLIEiJ_G0027134) #35	Add1 (MGP_CAROLIEiJ_G0027135) #36
Shrew mouse	MODERN SPECIES	4	Pisd (MGP_PahariEiJ_G0016889)	Prr14l (MGP_PahariEiJ_G0016890)	Depdc5 (MGP_PahariEiJ_G0016891)	Ywhah (MGP_PahariEiJ_G0016892)	Slc5a1 (MGP_PahariEiJ_G0016893)	Spon2 (MGP_PahariEiJ_G0016894) #13	Ctbp1 (MGP_PahariEiJ_G0016895) #14	Maea (MGP_PahariEiJ_G0016896) #15	Uvssa (MGP_PahariEiJ_G0016897) #16	Nkx1-1 (MGP_PahariEiJ_G0016898) #17	Fam53a (MGP_PahariEiJ_G0016899) #18	MGP_PahariEiJ_G0016900	Slbp (MGP_PahariEiJ_G0016901) #19	Tmem129 (MGP_PahariEiJ_G0016902) #20	MGP_PahariEiJ_G0016903 #21	Fgfr3 (MGP_PahariEiJ_G0016904) #22	MGP_PahariEiJ_G0016905	Nsd2 (MGP_PahariEiJ_G0016906) #24	Nelfa (MGP_PahariEiJ_G0016907) #25	MGP_PahariEiJ_G0016908 #26	Nat8l (MGP_PahariEiJ_G0016909) #27	Poln (MGP_PahariEiJ_G0016910) #28	Haus3 (MGP_PahariEiJ_G0016911) #29	Mxd4 (MGP_PahariEiJ_G0016912) #30	Zfyve28 (MGP_PahariEiJ_G0016913) #31	Cfap99 (MGP_PahariEiJ_G0016914) #32	MGP_PahariEiJ_G0016915	Fam193a (MGP_PahariEiJ_G0016916) #33	Tnip2 (MGP_PahariEiJ_G0016917) #34	Sh3bp2 (MGP_PahariEiJ_G0016918) #35	Add1 (MGP_PahariEiJ_G0016919) #36
Rat	MODERN SPECIES	5	Pisd (ENSRNOG00000018319)	Prr14l (ENSRNOG00000048891)	LOC100361879 (ENSRNOG00000045749)	Depdc5 (ENSRNOG00000018144)	Ywhah (ENSRNOG00000055471)	Slc5a1 (ENSRNOG00000017775)	Spon2 (ENSRNOG00000006033) #13	Ctbp1 (ENSRNOG00000005428) #14	Maea (ENSRNOG00000005397) #15	Uvssa (ENSRNOG00000005122) #16	Nkx1-1 (ENSRNOG00000005113) #17	Fam53a (ENSRNOG00000017548) #18	Slbp (ENSRNOG00000037162) #19	Tmem129 (ENSRNOG00000017329) #20	Tacc3 (ENSRNOG00000017259) #21	Fgfr3 (ENSRNOG00000016818) #22	Letm1 (ENSRNOG00000016427) #23	Nsd2 (ENSRNOG00000038140) #24	Nelfa (ENSRNOG00000015474) #25	RGD1560394 (ENSRNOG00000065022) #26	Nat8l (ENSRNOG00000049351) #27	Poln (ENSRNOG00000069005) #28	Mxd4 (ENSRNOG00000015033) #30	Zfyve28 (ENSRNOG00000014874) #31	Cfap99 (ENSRNOG00000058434) #32	Rnf4 (ENSRNOG00000013930)	Fam193a (ENSRNOG00000013832) #33	Tnip2 (ENSRNOG00000013805) #34	Sh3bp2 (ENSRNOG00000013747) #35	Add1 (ENSRNOG00000013039) #36	Mfsd10 (ENSRNOG00000012534) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1177	Dgkq (ENSNGAG00000022655) #7	Idua (ENSNGAG00000023311) #9	Slc26a1 (ENSNGAG00000019448) #8	ENSNGAG00000019399 #10	Rnf212 (ENSNGAG00000019964) #11	Tmed11 (ENSNGAG00000003592) #12	Spon2 (ENSNGAG00000007051) #13	Ctbp1 (ENSNGAG00000010894) #14	Maea (ENSNGAG00000002281) #15	Uvssa (ENSNGAG00000012000) #16	Nkx1-1 (ENSNGAG00000013945) #17	ENSNGAG00000015315	Slbp (ENSNGAG00000020799) #19	Tmem129 (ENSNGAG00000017856) #20	Tacc3 (ENSNGAG00000017862) #21	Fgfr3 (ENSNGAG00000015713) #22	Letm1 (ENSNGAG00000000720) #23	Nsd2 (ENSNGAG00000010171) #24	Nelfa (ENSNGAG00000023963) #25	ENSNGAG00000014727	Gm1673 (ENSNGAG00000023348) #26	ENSNGAG00000002900 #27	Poln (ENSNGAG00000022997) #28	Haus3 (ENSNGAG00000014413) #29	Mxd4 (ENSNGAG00000016526) #30	ENSNGAG00000014521 #31	Cfap99 (ENSNGAG00000020586) #32	Rnf4 (ENSNGAG00000018375)	Fam193a (ENSNGAG00000021458) #33	Tnip2 (ENSNGAG00000020375) #34	Sh3bp2 (ENSNGAG00000018119) #35
Lesser Egyptian jerboa	MODERN SPECIES	58	Idua (ENSJJAG00000010185) #9	Fgfrl1 (ENSJJAG00000012607) #10	ENSJJAG00000022256	Rnf212 (ENSJJAG00000023907) #11	Tmed11 (ENSJJAG00000021956) #12	Spon2 (ENSJJAG00000010729) #13	Ctbp1 (ENSJJAG00000022277) #14	Maea (ENSJJAG00000018909) #15	Uvssa (ENSJJAG00000000552) #16	Nkx1-1 (ENSJJAG00000017578) #17	ENSJJAG00000022694	ENSJJAG00000019010	ENSJJAG00000020549 #19	ENSJJAG00000015175 #20	Tacc3 (ENSJJAG00000015964) #21	Fgfr3 (ENSJJAG00000001873) #22	Letm1 (ENSJJAG00000024090) #23	Nsd2 (ENSJJAG00000012992) #24	Nelfa (ENSJJAG00000024237) #25	Gm1673 (ENSJJAG00000006076) #26	Nat8l (ENSJJAG00000024226) #27	Poln (ENSJJAG00000012540) #28	Haus3 (ENSJJAG00000013628) #29	ENSJJAG00000017036 #30	ENSJJAG00000000555 #31	Cfap99 (ENSJJAG00000019360) #32	ENSJJAG00000014107	ENSJJAG00000000617	Fam193a (ENSJJAG00000013646) #33	Tnip2 (ENSJJAG00000021336) #34	Sh3bp2 (ENSJJAG00000022545) #35
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	390	Idua (ENSDORG00000004020) #9	Slc26a1 (ENSDORG00000024823) #8	Fgfrl1 (ENSDORG00000016596) #10	ENSDORG00000024007	Tmed11 (ENSDORG00000013022) #12	Spon2 (ENSDORG00000025165) #13	ENSDORG00000024801 #14	Maea (ENSDORG00000007382) #15	Uvssa (ENSDORG00000001679) #16	ENSDORG00000025230	Fam53a (ENSDORG00000005663) #18	Slbp (ENSDORG00000003028) #19	ENSDORG00000003030 #20	ENSDORG00000026325	ENSDORG00000009704 #22	ENSDORG00000025862 #22	Letm1 (ENSDORG00000009706) #23	Nsd2 (ENSDORG00000013095) #24	Nelfa (ENSDORG00000013103) #25	Gm1673 (ENSDORG00000009221) #26	ENSDORG00000012646 #27	Poln (ENSDORG00000012647) #28	Haus3 (ENSDORG00000012649) #29	Mxd4 (ENSDORG00000000173) #30	ENSDORG00000026396 #31	Cfap99 (ENSDORG00000025036) #32	Rnf4 (ENSDORG00000006675)	Fam193a (ENSDORG00000016576) #33	ENSDORG00000016577 #34	Sh3bp2 (ENSDORG00000010509) #35	Htt (ENSDORG00000003272)
Kangaroo rat	MODERN SPECIES	390	Dgkq (ENSDORG00000008460) #7	Idua (ENSDORG00000004020) #9	Slc26a1 (ENSDORG00000024823) #8	Fgfrl1 (ENSDORG00000016596) #10	ENSDORG00000024007	Tmed11 (ENSDORG00000013022) #12	Spon2 (ENSDORG00000025165) #13	ENSDORG00000024801 #14	Maea (ENSDORG00000007382) #15	Uvssa (ENSDORG00000001679) #16	ENSDORG00000025230	Fam53a (ENSDORG00000005663) #18	Slbp (ENSDORG00000003028) #19	ENSDORG00000003030 #20	ENSDORG00000026325	ENSDORG00000009704 #22	ENSDORG00000025862 #22	Letm1 (ENSDORG00000009706) #23	Nsd2 (ENSDORG00000013095) #24	Nelfa (ENSDORG00000013103) #25	Gm1673 (ENSDORG00000009221) #26	ENSDORG00000012646 #27	Poln (ENSDORG00000012647) #28	Haus3 (ENSDORG00000012649) #29	Mxd4 (ENSDORG00000000173) #30	ENSDORG00000026396 #31	Cfap99 (ENSDORG00000025036) #32	Rnf4 (ENSDORG00000006675)	Fam193a (ENSDORG00000016576) #33	ENSDORG00000016577 #34	Sh3bp2 (ENSDORG00000010509) #35
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.o	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Marmotini_b	ANCESTRAL SPECIES	33	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.o	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Arctic ground squirrel	MODERN SPECIES	759													FAM53A (ENSUPAG00010002811) #18	ENSUPAG00010002700 #19	TACC3 (ENSUPAG00010002681) #21	FGFR3 (ENSUPAG00010002175) #22	ENSUPAG00010002097 #23	NSD2 (ENSUPAG00010001901) #24	NELFA (ENSUPAG00010001867) #25	C4orf48 (ENSUPAG00010001846) #26	NAT8L (ENSUPAG00010001835) #27
Squirrel	MODERN SPECIES	77	DGKQ (ENSSTOG00000014572) #7	SLC26A1 (ENSSTOG00000029038) #8	IDUA (ENSSTOG00000006937) #9	FGFRL1 (ENSSTOG00000022392) #10	ENSSTOG00000031016 #11	ENSSTOG00000028967 #12	SPON2 (ENSSTOG00000025443) #13	CTBP1 (ENSSTOG00000005891) #14	MAEA (ENSSTOG00000005706) #15	UVSSA (ENSSTOG00000005729) #16	ENSSTOG00000031320 #17	FAM53A (ENSSTOG00000023406) #18	SLBP (ENSSTOG00000003262) #19	TMEM129 (ENSSTOG00000020817) #20	TACC3 (ENSSTOG00000012665) #21	FGFR3 (ENSSTOG00000000815) #22	LETM1 (ENSSTOG00000014167) #23	NSD2 (ENSSTOG00000003369) #24	NELFA (ENSSTOG00000003421) #25	ENSSTOG00000024159 #27	POLN (ENSSTOG00000001059) #28	HAUS3 (ENSSTOG00000020375) #29	MXD4 (ENSSTOG00000028770) #30	ZFYVE28 (ENSSTOG00000012220) #31	CFAP99 (ENSSTOG00000032892) #32	ENSSTOG00000011101	FAM193A (ENSSTOG00000007426) #33	TNIP2 (ENSSTOG00000007444) #34	SH3BP2 (ENSSTOG00000028939) #35	ADD1 (ENSSTOG00000009726) #36	ENSSTOG00000025349
Alpin marmot	MODERN SPECIES	9	GAK (ENSMMMG00000008679)	ENSMMMG00000008701	TMEM175 (ENSMMMG00000008703)	SLC26A1 (ENSMMMG00000008883) #8	IDUA (ENSMMMG00000008893) #9	ENSMMMG00000009027	ENSMMMG00000009060 #12	SPON2 (ENSMMMG00000009081) #13	CTBP1 (ENSMMMG00000009094) #14	MAEA (ENSMMMG00000009131) #15	UVSSA (ENSMMMG00000009148) #16	FAM53A (ENSMMMG00000009208) #18	SLBP (ENSMMMG00000009227) #19	TMEM129 (ENSMMMG00000009228) #20	TACC3 (ENSMMMG00000009234) #21	FGFR3 (ENSMMMG00000009271) #22	ENSMMMG00000010030 #23	NSD2 (ENSMMMG00000010052) #24	NELFA (ENSMMMG00000010244) #25	ENSMMMG00000010260 #27	POLN (ENSMMMG00000010281) #28	HAUS3 (ENSMMMG00000010462) #29	MXD4 (ENSMMMG00000010466) #30	ZFYVE28 (ENSMMMG00000010480) #31	CFAP99 (ENSMMMG00000010512) #32	RNF4 (ENSMMMG00000010533)	FAM193A (ENSMMMG00000010560) #33	TNIP2 (ENSMMMG00000010616) #34	SH3BP2 (ENSMMMG00000010638) #35	ADD1 (ENSMMMG00000010678) #36	ENSMMMG00000012548
Eurasian red squirrel	MODERN SPECIES	18	TMEM175 (ENSSVLG00005012860)	SLC26A1 (ENSSVLG00005012770) #8	IDUA (ENSSVLG00005012525) #9	FGFRL1 (ENSSVLG00005012435) #10	ENSSVLG00005012104 #12	SPON2 (ENSSVLG00005012045) #13	CTBP1 (ENSSVLG00005011900) #14	ENSSVLG00005011867	MAEA (ENSSVLG00005011623) #15	UVSSA (ENSSVLG00005011273) #16	NKX1-1 (ENSSVLG00005011200) #17	FAM53A (ENSSVLG00005011171) #18	SLBP (ENSSVLG00005010930) #19	TMEM129 (ENSSVLG00005010840) #20	TACC3 (ENSSVLG00005010736) #21	FGFR3 (ENSSVLG00005018602) #22	ENSSVLG00005018420 #23	NSD2 (ENSSVLG00005018333) #24	NELFA (ENSSVLG00005018189) #25	C4orf48 (ENSSVLG00005018142) #26	NAT8L (ENSSVLG00005018097) #27	ENSSVLG00005018048	ENSSVLG00005018005	POLN (ENSSVLG00005017739) #28	HAUS3 (ENSSVLG00005017655) #29	MXD4 (ENSSVLG00005017609) #30	ENSSVLG00005017576 #31	ENSSVLG00005017470 #31	CFAP99 (ENSSVLG00005017288) #32	RNF4 (ENSSVLG00005017190)	FAM193A (ENSSVLG00005016851) #33
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043.f #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00940000164052	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Naked mole-rat female	MODERN SPECIES	1	ENSHGLG00000045507	ODAM (ENSHGLG00000001598)	ENSHGLG00000038103	ENSHGLG00000028349	SULT1E1 (ENSHGLG00000000404)	ENSHGLG00000000269	ENSHGLG00000003092	ENSHGLG00000002184	ENSHGLG00000047874	ENSHGLG00000002082	ENSHGLG00000001108	ENSHGLG00000006663 #18	ENSHGLG00000005955 #19	TMEM129 (ENSHGLG00000046034) #20	ENSHGLG00000004881 #21	FGFR3 (ENSHGLG00000004816) #22	LETM1 (ENSHGLG00000004719) #23	ENSHGLG00000044127	NELFA (ENSHGLG00000004622) #25	ENSHGLG00000020481	ENSHGLG00000010063 #26	POLN (ENSHGLG00000009000) #28	HAUS3 (ENSHGLG00000051007) #29	ENSHGLG00000047915	RNF4 (ENSHGLG00000046605)	ENSHGLG00000006269	ENSHGLG00000037168	TNIP2 (ENSHGLG00000005230) #34	SH3BP2 (ENSHGLG00000005188) #35	ADD1 (ENSHGLG00000005103) #36	ENSHGLG00000005051
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043.f #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00940000164052	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Guinea pig	MODERN SPECIES	24												FAM53A (ENSCPOG00000033116) #18	SLBP (ENSCPOG00000000031) #19	TMEM129 (ENSCPOG00000000032) #20	TACC3 (ENSCPOG00000023531) #21	FGFR3 (ENSCPOG00000025595) #22	LETM1 (ENSCPOG00000011337) #23	NSD2 (ENSCPOG00000007513) #24	NELFA (ENSCPOG00000019715) #25	C4orf48 (ENSCPOG00000031206) #26	ENSCPOG00000038761 #27	POLN (ENSCPOG00000001665) #28	HAUS3 (ENSCPOG00000021994) #29	MXD4 (ENSCPOG00000022492) #30	ZFYVE28 (ENSCPOG00000027392) #31	CFAP99 (ENSCPOG00000040209) #32	RNF4 (ENSCPOG00000030545)	FAM193A (ENSCPOG00000004013) #33	ENSCPOG00000024404	SH3BP2 (ENSCPOG00000009421) #35	ENSCPOG00000031940
Hystricomorpha_b	ANCESTRAL SPECIES	37	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043.f #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00940000164052	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Long-tailed chinchilla	MODERN SPECIES	221	DGKQ (ENSCLAG00000011985) #7	SLC26A1 (ENSCLAG00000006725) #8	IDUA (ENSCLAG00000011871) #9	FGFRL1 (ENSCLAG00000007552) #10	ENSCLAG00000008587 #11	ENSCLAG00000010654 #12	SPON2 (ENSCLAG00000006806) #13	CTBP1 (ENSCLAG00000008653) #14	MAEA (ENSCLAG00000013403) #15	UVSSA (ENSCLAG00000008812) #16	ENSCLAG00000007213 #17	FAM53A (ENSCLAG00000007294) #18	SLBP (ENSCLAG00000008157) #19	TMEM129 (ENSCLAG00000010127) #20	TACC3 (ENSCLAG00000011683) #21	FGFR3 (ENSCLAG00000006986) #22	LETM1 (ENSCLAG00000010785) #23	NSD2 (ENSCLAG00000014450) #24	NELFA (ENSCLAG00000012299) #25	C4orf48 (ENSCLAG00000009344) #26	ENSCLAG00000009488 #27	POLN (ENSCLAG00000010355) #28	HAUS3 (ENSCLAG00000010866) #29	MXD4 (ENSCLAG00000011445) #30	ZFYVE28 (ENSCLAG00000009540) #31	CFAP99 (ENSCLAG00000012930) #32	RNF4 (ENSCLAG00000014072)	FAM193A (ENSCLAG00000014296) #33	ENSCLAG00000006931	SH3BP2 (ENSCLAG00000008009) #35	ADD1 (ENSCLAG00000011442) #36
Degu	MODERN SPECIES	47	DGKQ (ENSODEG00000012712) #7	SLC26A1 (ENSODEG00000015117) #8	IDUA (ENSODEG00000012062) #9	FGFRL1 (ENSODEG00000011612) #10	ENSODEG00000012265 #11	ENSODEG00000012726 #12	SPON2 (ENSODEG00000012066) #13	ENSODEG00000013011 #14	MAEA (ENSODEG00000012556) #15	UVSSA (ENSODEG00000011757) #16	FAM53A (ENSODEG00000011180) #18	ENSODEG00000012272	SLBP (ENSODEG00000012641) #19	ENSODEG00000011155 #20	ENSODEG00000012973 #21	ENSODEG00000012582 #22	LETM1 (ENSODEG00000012866) #23	NSD2 (ENSODEG00000012080) #24	NELFA (ENSODEG00000011122) #25	C4orf48 (ENSODEG00000011093) #26	ENSODEG00000011723 #27	ENSODEG00000011259	POLN (ENSODEG00000011265) #28	HAUS3 (ENSODEG00000011986) #29	MXD4 (ENSODEG00000011512) #30	ENSODEG00000011568 #31	CFAP99 (ENSODEG00000011882) #32	RNF4 (ENSODEG00000011133)	ENSODEG00000010562	FAM193A (ENSODEG00000010949) #33	ENSODEG00000010959
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000165250	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Eulipotyphla	ANCESTRAL SPECIES	1869																ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23
Common shrew	MODERN SPECIES	4355																ENSSARG00000002941 #22	LETM1 (ENSSARG00000002990) #23
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Suina	ANCESTRAL SPECIES	33	ENSGT00940000159492 #7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Chacoan peccary	DUPLICATION
Chacoan peccary	MODERN SPECIES	969																ENSCWAG00000020968 #22	ENSCWAG00000020975 #22	LETM1 (ENSCWAG00000020987) #23	NSD2 (ENSCWAG00000021027) #24	NELFA (ENSCWAG00000021130) #25
Chacoan peccary	MODERN SPECIES	969															ENSCWAG00000020968 #22	ENSCWAG00000020975 #22	LETM1 (ENSCWAG00000020987) #23	NSD2 (ENSCWAG00000021027) #24	NELFA (ENSCWAG00000021130) #25
Pig	MODERN SPECIES	16	DGKQ (ENSSSCG00000027286) #7	IDUA (ENSSSCG00000032262) #9	SLC26A1 (ENSSSCG00000035739) #8	FGFRL1 (ENSSSCG00000036512) #10	ENSSSCG00000045703 #11	ENSSSCG00000032808 #12	SPON2 (ENSSSCG00000039488) #13	CTBP1 (ENSSSCG00000031302) #14	MAEA (ENSSSCG00000032304) #15	UVSSA (ENSSSCG00000037035) #16	NKX1-1 (ENSSSCG00000038573) #17	FAM53A (ENSSSCG00000032633) #18	SLBP (ENSSSCG00000055957) #19	TMEM129 (ENSSSCG00000008678) #20	ENSSSCG00000008677 #21	FGFR3 (ENSSSCG00000030827) #22	LETM1 (ENSSSCG00000008675) #23	NSD2 (ENSSSCG00000008682) #24	NELFA (ENSSSCG00000008681) #25	C4orf48 (ENSSSCG00000063120) #26	NAT8L (ENSSSCG00000033541) #27	POLN (ENSSSCG00000027718) #28	MXD4 (ENSSSCG00000008687) #30	ZFYVE28 (ENSSSCG00000008689) #31	CFAP99 (ENSSSCG00000034633) #32	ENSSSCG00000054601	RNF4 (ENSSSCG00000008690)	FAM193A (ENSSSCG00000029745) #33	TNIP2 (ENSSSCG00000008691) #34	SH3BP2 (ENSSSCG00000022004) #35	ADD1 (ENSSSCG00000008692) #36
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Artiodactyla_b	ANCESTRAL SPECIES	30	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Blue whale	MODERN SPECIES	16	TMEM175 (ENSBMSG00010010458)	DGKQ (ENSBMSG00010010384) #7	SLC26A1 (ENSBMSG00010010350) #8	IDUA (ENSBMSG00010010336) #9	FGFRL1 (ENSBMSG00010010322) #10	ENSBMSG00010010309 #12	CTBP1 (ENSBMSG00010010280) #14	MAEA (ENSBMSG00010010210) #15	UVSSA (ENSBMSG00010010170) #16	NKX1-1 (ENSBMSG00010010159) #17	FAM53A (ENSBMSG00010010143) #18	SLBP (ENSBMSG00010010021) #19	TMEM129 (ENSBMSG00010009983) #20	ENSBMSG00010009968	ENSBMSG00010009945 #21	FGFR3 (ENSBMSG00010009892) #22	LETM1 (ENSBMSG00010009849) #23	ENSBMSG00010009841	ENSBMSG00010009831 #24	ENSBMSG00010009815 #24	NELFA (ENSBMSG00010009791) #25	C4orf48 (ENSBMSG00010009769) #26	NAT8L (ENSBMSG00010009755) #27	POLN (ENSBMSG00010009707) #28	HAUS3 (ENSBMSG00010009672) #29	MXD4 (ENSBMSG00010009650) #30	ENSBMSG00010009628 #31	CFAP99 (ENSBMSG00010009605) #32	RNF4 (ENSBMSG00010009582)	FAM193A (ENSBMSG00010009552) #33	TNIP2 (ENSBMSG00010009509) #34
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000154158.k.b	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00550000074784.a.b	ENSGT01030000234916	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33
Sperm whale	MODERN SPECIES	18	CPLX1 (ENSPCTG00005007813)	PCGF3 (ENSPCTG00005007779)	ENSPCTG00005007664 #9	FGFRL1 (ENSPCTG00005007637) #10	ENSPCTG00005007620 #12	SPON2 (ENSPCTG00005007593) #13	CTBP1 (ENSPCTG00005007566) #14	ENSPCTG00005007552	MAEA (ENSPCTG00005007348) #15	UVSSA (ENSPCTG00005007289) #16	NKX1-1 (ENSPCTG00005007269) #17	FAM53A (ENSPCTG00005007252) #18	SLBP (ENSPCTG00005007183) #19	TMEM129 (ENSPCTG00005007122) #20	TACC3 (ENSPCTG00005007081) #21	FGFR3 (ENSPCTG00005006670) #22	LETM1 (ENSPCTG00005006566) #23	ENSPCTG00005006543	ENSPCTG00005006514	NSD2 (ENSPCTG00005006400) #24	NELFA (ENSPCTG00005006320) #25	ENSPCTG00005006283 #26	NAT8L (ENSPCTG00005006259) #27	ENSPCTG00005006248	POLN (ENSPCTG00005006144) #28	HAUS3 (ENSPCTG00005006113) #29	ENSPCTG00005019696	MXD4 (ENSPCTG00005019644) #30	ENSPCTG00005019596 #31	ENSPCTG00005019514 #31	CFAP99 (ENSPCTG00005019388) #32
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000154158.k.b	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.r #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00550000074784.a.b	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Dolphin	MODERN SPECIES	2008												ENSTTRG00000010877 #18	ENSTTRG00000010901 #19	TMEM129 (ENSTTRG00000010917) #20	TACC3 (ENSTTRG00000010930) #21	ENSTTRG00000010941 #22	LETM1 (ENSTTRG00000010947) #23
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000154158.k.b	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.r #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00550000074784.a.b	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000154158.k.b	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.r #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00550000074784.a.b	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Beluga whale	MODERN SPECIES	77	DGKQ (ENSDLEG00000016886) #7	SLC26A1 (ENSDLEG00000016873) #8	IDUA (ENSDLEG00000016854) #9	FGFRL1 (ENSDLEG00000016841) #10	ENSDLEG00000016829 #12	SPON2 (ENSDLEG00000016801) #13	CTBP1 (ENSDLEG00000016785) #14	ENSDLEG00000016755	MAEA (ENSDLEG00000016731) #15	UVSSA (ENSDLEG00000016715) #16	NKX1-1 (ENSDLEG00000016706) #17	FAM53A (ENSDLEG00000016696) #18	SLBP (ENSDLEG00000016673) #19	TMEM129 (ENSDLEG00000016657) #20	ENSDLEG00000016641 #21	FGFR3 (ENSDLEG00000016588) #22	LETM1 (ENSDLEG00000016566) #23	ENSDLEG00000016553	NSD2 (ENSDLEG00000016523) #24	NELFA (ENSDLEG00000016475) #25	C4orf48 (ENSDLEG00000016453) #26	NAT8L (ENSDLEG00000016443) #27	POLN (ENSDLEG00000016047) #28	HAUS3 (ENSDLEG00000016006) #29	MXD4 (ENSDLEG00000015987) #30	ENSDLEG00000015973	ENSDLEG00000015957 #31	CFAP99 (ENSDLEG00000015790) #32	RNF4 (ENSDLEG00000015767)	FAM193A (ENSDLEG00000015632) #33	TNIP2 (ENSDLEG00000015610) #34
Narwhal	MODERN SPECIES	307	DGKQ (ENSMMNG00015009133) #7	SLC26A1 (ENSMMNG00015009113) #8	IDUA (ENSMMNG00015009092) #9	FGFRL1 (ENSMMNG00015009082) #10	ENSMMNG00015009070 #12	SPON2 (ENSMMNG00015009059) #13	CTBP1 (ENSMMNG00015009032) #14	ENSMMNG00015009007	MAEA (ENSMMNG00015008969) #15	UVSSA (ENSMMNG00015008918) #16	NKX1-1 (ENSMMNG00015008894) #17	FAM53A (ENSMMNG00015008881) #18	SLBP (ENSMMNG00015008857) #19	TMEM129 (ENSMMNG00015008823) #20	TACC3 (ENSMMNG00015008798) #21	FGFR3 (ENSMMNG00015008748) #22	LETM1 (ENSMMNG00015008712) #23	ENSMMNG00015008696	NSD2 (ENSMMNG00015008622) #24	NELFA (ENSMMNG00015008560) #25	C4orf48 (ENSMMNG00015008532) #26	ENSMMNG00015008518 #27	POLN (ENSMMNG00015008466) #28	HAUS3 (ENSMMNG00015008433) #29	MXD4 (ENSMMNG00015008416) #30	ENSMMNG00015008390 #31	ENSMMNG00015008379 #31	CFAP99 (ENSMMNG00015008357) #32	RNF4 (ENSMMNG00015008314)	FAM193A (ENSMMNG00015008181) #33	TNIP2 (ENSMMNG00015008095) #34
Vaquita	MODERN SPECIES	16	TMEM175 (ENSPSNG00000018137)	DGKQ (ENSPSNG00000018241) #7	IDUA (ENSPSNG00000018525) #9	SLC26A1 (ENSPSNG00000018577) #8	FGFRL1 (ENSPSNG00000018608) #10	ENSPSNG00000018647 #12	SPON2 (ENSPSNG00000018706) #13	CTBP1 (ENSPSNG00000018755) #14	ENSPSNG00000018860	MAEA (ENSPSNG00000018923) #15	UVSSA (ENSPSNG00000019027) #16	NKX1-1 (ENSPSNG00000019051) #17	FAM53A (ENSPSNG00000019099) #18	SLBP (ENSPSNG00000019131) #19	ENSPSNG00000019238 #20	FGFR3 (ENSPSNG00000019417) #22	LETM1 (ENSPSNG00000019524) #23	ENSPSNG00000019562	NSD2 (ENSPSNG00000019603) #24	NELFA (ENSPSNG00000019706) #25	C4orf48 (ENSPSNG00000019794) #26	NAT8L (ENSPSNG00000019815) #27	POLN (ENSPSNG00000019912) #28	HAUS3 (ENSPSNG00000019961) #29	MXD4 (ENSPSNG00000020007) #30	ENSPSNG00000020034 #31	ENSPSNG00000020080 #31	CFAP99 (ENSPSNG00000020141) #32	RNF4 (ENSPSNG00000020234)	FAM193A (ENSPSNG00000020338) #33	TNIP2 (ENSPSNG00000020458) #34
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000159527	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	29	GAK (ENSCHYG00000000449)	TMEM175 (ENSCHYG00000000372)	DGKQ (ENSCHYG00000000312) #7	SLC26A1 (ENSCHYG00000000284) #8	ENSCHYG00000000225 #9	FGFRL1 (ENSCHYG00000000201) #10	ENSCHYG00000000191 #12	SPON2 (ENSCHYG00000026323) #13	ENSCHYG00000026312	CTBP1 (ENSCHYG00000026282) #14	MAEA (ENSCHYG00000026208) #15	UVSSA (ENSCHYG00000026183) #16	SLBP (ENSCHYG00000026159) #19	TMEM129 (ENSCHYG00000026136) #20	ENSCHYG00000026110 #21	ENSCHYG00000026079 #22	LETM1 (ENSCHYG00000026028) #23	ENSCHYG00000025972 #24	NELFA (ENSCHYG00000025867) #25	NAT8L (ENSCHYG00000025851) #27	POLN (ENSCHYG00000025750) #28	HAUS3 (ENSCHYG00000025719) #29	ENSCHYG00000025702 #31	ENSCHYG00000025686	CFAP99 (ENSCHYG00000025667) #32	RNF4 (ENSCHYG00000025555)	ENSCHYG00000025523	FAM193A (ENSCHYG00000025484) #33	TNIP2 (ENSCHYG00000025444) #34	SH3BP2 (ENSCHYG00000025298) #35	ENSCHYG00000024729 #36
Yarkand deer	MODERN SPECIES	681																ENSCHYG00000021370 #22
Percora_a	ANCESTRAL SPECIES	18	ENSGT00940000159527	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Siberian musk deer	MODERN SPECIES	354	ENSMMSG00000010313	TMEM175 (ENSMMSG00000010338)	DGKQ (ENSMMSG00000010406) #7	IDUA (ENSMMSG00000010506) #9	SLC26A1 (ENSMMSG00000010599) #8	FGFRL1 (ENSMMSG00000010628) #10	ENSMMSG00000010668 #12	SPON2 (ENSMMSG00000010709) #13	CTBP1 (ENSMMSG00000010749) #14	MAEA (ENSMMSG00000010850) #15	UVSSA (ENSMMSG00000011083) #16	NKX1-1 (ENSMMSG00000011124) #17	SLBP (ENSMMSG00000011149) #19	TMEM129 (ENSMMSG00000011303) #20	ENSMMSG00000011328 #21	FGFR3 (ENSMMSG00000011411) #22	LETM1 (ENSMMSG00000011470) #23	NSD2 (ENSMMSG00000011600) #24	NELFA (ENSMMSG00000011766) #25	C4orf48 (ENSMMSG00000011837) #26	NAT8L (ENSMMSG00000011858) #27	POLN (ENSMMSG00000011904) #28	HAUS3 (ENSMMSG00000011973) #29	MXD4 (ENSMMSG00000012003) #30	ENSMMSG00000012038 #31	ENSMMSG00000012065 #31	CFAP99 (ENSMMSG00000012099) #32	RNF4 (ENSMMSG00000015797)	FAM193A (ENSMMSG00000015827) #33	TNIP2 (ENSMMSG00000015869) #34	SH3BP2 (ENSMMSG00000015976) #35
Bovidae	ANCESTRAL SPECIES	18	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Bovinae	ANCESTRAL SPECIES	15	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
American bison	MODERN SPECIES	1489																FGFR3 (ENSBBBG00000008640) #22
Bos	ANCESTRAL SPECIES	15	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Bos_b	ANCESTRAL SPECIES	14	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00390000001735.e.b	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Cow	MODERN SPECIES	25	DGKQ (ENSBTAG00000017240) #7	SLC26A1 (ENSBTAG00000007001) #8	IDUA (ENSBTAG00000007002) #9	FGFRL1 (ENSBTAG00000027464) #10	ENSBTAG00000049784	ENSBTAG00000002247 #12	SPON2 (ENSBTAG00000004261) #13	CTBP1 (ENSBTAG00000008480) #14	MAEA (ENSBTAG00000012575) #15	UVSSA (ENSBTAG00000012577) #16	NKX1-1 (ENSBTAG00000048789) #17	ENSBTAG00000048974	SLBP (ENSBTAG00000001328) #19	TMEM129 (ENSBTAG00000011042) #20	TACC3 (ENSBTAG00000011044) #21	FGFR3 (ENSBTAG00000007164) #22	LETM1 (ENSBTAG00000020108) #23	NSD2 (ENSBTAG00000007986) #24	NELFA (ENSBTAG00000017921) #25	C6H4orf48 (ENSBTAG00000031395) #26	ENSBTAG00000053874 #27	POLN (ENSBTAG00000017296) #28	HAUS3 (ENSBTAG00000024787) #29	MXD4 (ENSBTAG00000015209) #30	ZFYVE28 (ENSBTAG00000006683) #31	CFAP99 (ENSBTAG00000054376) #32	RNF4 (ENSBTAG00000027453)	FAM193A (ENSBTAG00000009744) #33	TNIP2 (ENSBTAG00000015126)	SH3BP2 (ENSBTAG00000013996) #35	ADD1 (ENSBTAG00000021128) #36
Hybrid Bos Indicus	MODERN SPECIES	25	TMEM175 (ENSBIXG00005008181)	DGKQ (ENSBIXG00005008250) #7	SLC26A1 (ENSBIXG00005006076) #8	IDUA (ENSBIXG00005008330) #9	FGFRL1 (ENSBIXG00005008365) #10	ENSBIXG00005008383	ENSBIXG00005005681 #12	SPON2 (ENSBIXG00005006081) #13	CTBP1 (ENSBIXG00005008435) #14	MAEA (ENSBIXG00005008499) #15	UVSSA (ENSBIXG00005008522) #16	NKX1-1 (ENSBIXG00005008534) #17	ENSBIXG00005008565 #19	TMEM129 (ENSBIXG00005000225) #20	TACC3 (ENSBIXG00005008616) #21	FGFR3 (ENSBIXG00005008663) #22	LETM1 (ENSBIXG00005008685) #23	NSD2 (ENSBIXG00005008768) #24	NELFA (ENSBIXG00005008819) #25	C4orf48 (ENSBIXG00005006404) #26	NAT8L (ENSBIXG00005008838) #27	ENSBIXG00005006191	POLN (ENSBIXG00005000322) #28	ENSBIXG00005008965 #29	MXD4 (ENSBIXG00005008980) #30	ENSBIXG00005009002 #31	ENSBIXG00005009025 #31	CFAP99 (ENSBIXG00005009067) #32	RNF4 (ENSBIXG00005005461)	FAM193A (ENSBIXG00005009399) #33	TNIP2 (ENSBIXG00005009483) #34
Bos_a	ANCESTRAL SPECIES	61	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00990000210994	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.b	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Domestic yak	MODERN SPECIES	25	IDUA (ENSBGRG00000019585) #9	FGFRL1 (ENSBGRG00000019493) #10	ENSBGRG00000019433	ENSBGRG00000019312 #11	ENSBGRG00000019257 #12	ENSBGRG00000019141 #13	ENSBGRG00000018881 #14	MAEA (ENSBGRG00000018651) #15	UVSSA (ENSBGRG00000018583) #16	NKX1-1 (ENSBGRG00000018511) #17	ENSBGRG00000018496	ENSBGRG00000018427	SLBP (ENSBGRG00000018109) #19	TMEM129 (ENSBGRG00000017981) #20	TACC3 (ENSBGRG00000017804) #21	FGFR3 (ENSBGRG00000017575) #22	LETM1 (ENSBGRG00000017241) #23	ENSBGRG00000017205 #24	NELFA (ENSBGRG00000017020) #25	C4orf48 (ENSBGRG00000016955) #26	ENSBGRG00000016908 #27	POLN (ENSBGRG00000016638) #28	ENSBGRG00000016598 #14	HAUS3 (ENSBGRG00000016524) #29	ENSBGRG00000016319 #30	ENSBGRG00000016224 #31	ENSBGRG00000016089 #31	CFAP99 (ENSBGRG00000015852) #32	RNF4 (ENSBGRG00000015725)	FAM193A (ENSBGRG00000015247) #33	TNIP2 (ENSBGRG00000015105) #34
Wild yak	MODERN SPECIES	798									MAEA (ENSBMUG00000021584) #15	UVSSA (ENSBMUG00000021556) #16	ENSBMUG00000021513	ENSBMUG00000021511	SLBP (ENSBMUG00000021468) #19	TMEM129 (ENSBMUG00000021381) #20	TACC3 (ENSBMUG00000021368) #21	FGFR3 (ENSBMUG00000020745) #22	LETM1 (ENSBMUG00000019981) #23	NSD2 (ENSBMUG00000019910) #24	NELFA (ENSBMUG00000019729) #25	POLN (ENSBMUG00000019557) #28	ENSBMUG00000019531
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000159527	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.a #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.k #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Goat	MODERN SPECIES	653																FGFR3 (ENSCHIG00000007253) #22
Rambouillet Sheep	MODERN SPECIES	22	ENSOARG00020011415	TMEM175 (ENSOARG00020011312)	DGKQ (ENSOARG00020011039) #7	SLC26A1 (ENSOARG00020011004) #8	IDUA (ENSOARG00020010816) #9	FGFRL1 (ENSOARG00020010713) #10	ENSOARG00020010628 #12	SPON2 (ENSOARG00020010589) #13	CTBP1 (ENSOARG00020010402) #14	MAEA (ENSOARG00020009920) #15	UVSSA (ENSOARG00020009863) #16	NKX1-1 (ENSOARG00020009848) #17	SLBP (ENSOARG00020023875) #19	TMEM129 (ENSOARG00020023839) #20	ENSOARG00020023797 #21	FGFR3 (ENSOARG00020023492) #22	LETM1 (ENSOARG00020023387) #23	NSD2 (ENSOARG00020023148) #24	NELFA (ENSOARG00020023088) #25	C4orf48 (ENSOARG00020023033) #26	NAT8L (ENSOARG00020023001) #27	ENSOARG00020022986	POLN (ENSOARG00020022890) #28	HAUS3 (ENSOARG00020022851) #29	MXD4 (ENSOARG00020022801) #30	ENSOARG00020022734 #31	ENSOARG00020022674 #31	CFAP99 (ENSOARG00020022601) #32	RNF4 (ENSOARG00020022503)	FAM193A (ENSOARG00020022278) #33	TNIP2 (ENSOARG00020022129) #34
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217.ac #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.f #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217.ac #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Megabat	MODERN SPECIES	2087																FGFR3 (ENSPVAG00000007535) #22	LETM1 (ENSPVAG00000007537) #23
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858.f #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217.ac #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Greater horseshoe bat	MODERN SPECIES	23	TMEM175 (ENSRFEG00010012470)	DGKQ (ENSRFEG00010012388) #7	SLC26A1 (ENSRFEG00010012284) #8	IDUA (ENSRFEG00010012246) #9	FGFRL1 (ENSRFEG00010012188) #10	ENSRFEG00010012091 #12	SPON2 (ENSRFEG00010012048) #13	CTBP1 (ENSRFEG00010011872) #14	MAEA (ENSRFEG00010011546) #15	UVSSA (ENSRFEG00010011482) #16	NKX1-1 (ENSRFEG00010011426) #17	FAM53A (ENSRFEG00010011394) #18	SLBP (ENSRFEG00010011166) #19	TMEM129 (ENSRFEG00010011065) #20	TACC3 (ENSRFEG00010010981) #21	FGFR3 (ENSRFEG00010010819) #22	LETM1 (ENSRFEG00010010660) #23	NSD2 (ENSRFEG00010010545) #24	NELFA (ENSRFEG00010010351) #25	C4orf48 (ENSRFEG00010010259) #26	NAT8L (ENSRFEG00010010189) #27	POLN (ENSRFEG00010009949) #28	HAUS3 (ENSRFEG00010009879) #29	MXD4 (ENSRFEG00010009834) #30	ZFYVE28 (ENSRFEG00010009726) #31	CFAP99 (ENSRFEG00010009563) #32	RNF4 (ENSRFEG00010009477)	FAM193A (ENSRFEG00010009206) #33	TNIP2 (ENSRFEG00010009107) #34	SH3BP2 (ENSRFEG00010008972) #35	ADD1 (ENSRFEG00010008824) #36
Equus	ANCESTRAL SPECIES	12	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217.ac #31	ENSGT00500000045231 #32	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00830000128422
Donkey	MODERN SPECIES	22	TMEM175 (ENSEASG00005022646)	DGKQ (ENSEASG00005022651) #7	SLC26A1 (ENSEASG00005022673) #8	IDUA (ENSEASG00005022661) #9	FGFRL1 (ENSEASG00005022675) #10	RNF212 (ENSEASG00005036465) #11	ENSEASG00005022677 #12	SPON2 (ENSEASG00005022679) #13	CTBP1 (ENSEASG00005022682) #14	MAEA (ENSEASG00005022693) #15	UVSSA (ENSEASG00005022702) #16	ENSEASG00005031810	SLBP (ENSEASG00005024705) #19	TMEM129 (ENSEASG00005022718) #20	TACC3 (ENSEASG00005022722) #21	FGFR3 (ENSEASG00005022725) #22	LETM1 (ENSEASG00005022727) #23	NSD2 (ENSEASG00005022729) #24	NELFA (ENSEASG00005022732) #25	C4orf48 (ENSEASG00005022733) #26	NAT8L (ENSEASG00005022734) #27	HAUS3 (ENSEASG00005022762) #29	POLN (ENSEASG00005022744) #28	MXD4 (ENSEASG00005034001) #30	ENSEASG00005028915 #31	ENSEASG00005022764 #31	CFAP99 (ENSEASG00005022766) #32	ENSEASG00005036723	RNF4 (ENSEASG00005031929)	ENSEASG00005035809	FAM193A (ENSEASG00005022783) #33
Horse	MODERN SPECIES	22	DGKQ (ENSECAG00000022309) #7	IDUA (ENSECAG00000019632) #9	SLC26A1 (ENSECAG00000022104) #8	FGFRL1 (ENSECAG00000018253) #10	ENSECAG00000052273	RNF212 (ENSECAG00000038589) #11	ENSECAG00000018022 #12	SPON2 (ENSECAG00000016940) #13	CTBP1 (ENSECAG00000015999) #14	MAEA (ENSECAG00000013742) #15	UVSSA (ENSECAG00000012127) #16	NKX1-1 (ENSECAG00000031807) #17	SLBP (ENSECAG00000011689) #19	TMEM129 (ENSECAG00000011634) #20	TACC3 (ENSECAG00000011380) #21	FGFR3 (ENSECAG00000019533) #22	LETM1 (ENSECAG00000018569) #23	NSD2 (ENSECAG00000011661) #24	NELFA (ENSECAG00000010240) #25	NAT8L (ENSECAG00000009867) #27	HAUS3 (ENSECAG00000004593) #29	POLN (ENSECAG00000007802) #28	MXD4 (ENSECAG00000029077) #30	ENSECAG00000058211 #31	ZFYVE28 (ENSECAG00000024955) #31	CFAP99 (ENSECAG00000029686) #32	ENSECAG00000060379	FAM193A (ENSECAG00000024501) #33	TNIP2 (ENSECAG00000024134) #34	SH3BP2 (ENSECAG00000021841) #35	ADD1 (ENSECAG00000013136) #36
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429.x #24	ENSGT00940000157429.w.a #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429.x #24	ENSGT00940000157429.w.a #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00390000011904 #29	ENSGT00910000148326	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
lion	MODERN SPECIES	4	GAK (ENSPLOG00000005676)	TMEM175 (ENSPLOG00000005620)	DGKQ (ENSPLOG00000005591) #7	SLC26A1 (ENSPLOG00000005194) #8	IDUA (ENSPLOG00000005177) #9	FGFRL1 (ENSPLOG00000005150) #10	ENSPLOG00000005044 #12	SPON2 (ENSPLOG00000005028) #13	CTBP1 (ENSPLOG00000004983) #14	MAEA (ENSPLOG00000004894) #15	UVSSA (ENSPLOG00000004830) #16	NKX1-1 (ENSPLOG00000004811) #17	SLBP (ENSPLOG00000004771) #19	TMEM129 (ENSPLOG00000004687) #20	TACC3 (ENSPLOG00000004666) #21	FGFR3 (ENSPLOG00000004622) #22	LETM1 (ENSPLOG00000004551) #23	NSD2 (ENSPLOG00000004484) #24	NELFA (ENSPLOG00000004443) #25	C4orf48 (ENSPLOG00000004418) #26	ENSPLOG00000004406 #27	HAUS3 (ENSPLOG00000004393) #29	ENSPLOG00000004384	MXD4 (ENSPLOG00000004376) #30	ENSPLOG00000004365 #31	ENSPLOG00000004349 #31	CFAP99 (ENSPLOG00000004314) #32	RNF4 (ENSPLOG00000004275)	ENSPLOG00000004250	FAM193A (ENSPLOG00000004221) #33	ENSPLOG00000004190
leopard	MODERN SPECIES	25																FGFR3 (ENSPPRG00000018012) #22	LETM1 (ENSPPRG00000019273) #23	ENSPPRG00000000058 #24	ENSPPRG00000002562 #24	NELFA (ENSPPRG00000003777) #25	C4orf48 (ENSPPRG00000004524) #26	ENSPPRG00000004633 #27	HAUS3 (ENSPPRG00000007568) #29	MXD4 (ENSPPRG00000009897) #30	ENSPPRG00000012352 #31	CFAP99 (ENSPPRG00000013633) #32	RNF4 (ENSPPRG00000020972)	ENSPPRG00000022001	FAM193A (ENSPPRG00000023349) #33	TNIP2 (ENSPPRG00000022784) #34	SH3BP2 (ENSPPRG00000000297) #35
Cat	MODERN SPECIES	235	TMEM175 (ENSFCAG00000012656)	DGKQ (ENSFCAG00000012659) #7	ENSFCAG00000026340 #8	IDUA (ENSFCAG00000004723) #9	FGFRL1 (ENSFCAG00000043643) #10	RNF212 (ENSFCAG00000046779) #11	ENSFCAG00000018929 #12	SPON2 (ENSFCAG00000036077) #13	CTBP1 (ENSFCAG00000002265) #14	MAEA (ENSFCAG00000002950) #15	UVSSA (ENSFCAG00000002951) #16	NKX1-1 (ENSFCAG00000043543) #17	SLBP (ENSFCAG00000000169) #19	TMEM129 (ENSFCAG00000025439) #20	TACC3 (ENSFCAG00000000171) #21	FGFR3 (ENSFCAG00000018385) #22	LETM1 (ENSFCAG00000010616) #23	NSD2 (ENSFCAG00000037938) #24	NELFA (ENSFCAG00000010623) #25	CB1H4orf48 (ENSFCAG00000033658) #26	NAT8L (ENSFCAG00000044588) #27	HAUS3 (ENSFCAG00000027704) #29	MXD4 (ENSFCAG00000042853) #30	ZFYVE28 (ENSFCAG00000052700) #31	CFAP99 (ENSFCAG00000037967) #32	RNF4 (ENSFCAG00000004051)	FAM193A (ENSFCAG00000004056) #33	TNIP2 (ENSFCAG00000004062) #34	ENSFCAG00000047433	SH3BP2 (ENSFCAG00000025020) #35	ENSFCAG00000028314
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Canidae	ANCESTRAL SPECIES	21	ENSGT00390000010628	ENSGT00390000005639.a.a	ENSGT00390000000470	ENSGT00850000132319.a.a.b	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00530000063669.a	ENSGT00950000186028	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Red fox	MODERN SPECIES	1	PROM1 (ENSVVUG00000015384)	TAPT1 (ENSVVUG00000015407)	LDB2 (ENSVVUG00000015458)	QDPR (ENSVVUG00000015478)	CLRN2 (ENSVVUG00000015482)	LAP3 (ENSVVUG00000015485)	MED28 (ENSVVUG00000015489)	FAM184B (ENSVVUG00000015510)	ENSVVUG00000015521	MAEA (ENSVVUG00000015526) #15	UVSSA (ENSVVUG00000015547) #16	FAM53A (ENSVVUG00000015571) #18	SLBP (ENSVVUG00000015578) #19	TMEM129 (ENSVVUG00000015588) #20	TACC3 (ENSVVUG00000015594) #21	FGFR3 (ENSVVUG00000015935) #22	LETM1 (ENSVVUG00000023797) #23	NSD2 (ENSVVUG00000023814) #24	NELFA (ENSVVUG00000023825) #25	ENSVVUG00000023827 #26	NAT8L (ENSVVUG00000023829) #27	POLN (ENSVVUG00000023835) #28	HAUS3 (ENSVVUG00000023845) #29	MXD4 (ENSVVUG00000023848) #30	ZFYVE28 (ENSVVUG00000023859) #31	CFAP99 (ENSVVUG00000023861) #32	RNF4 (ENSVVUG00000023864)	ENSVVUG00000023867	FAM193A (ENSVVUG00000023873) #33	TNIP2 (ENSVVUG00000023886) #34	SH3BP2 (ENSVVUG00000023905) #35
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00390000005639.a.a	ENSGT00940000155341.h.n	ENSGT00390000000470	ENSGT00850000132319.a.a.b	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00530000063669.a	ENSGT00950000186028	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Dingo	MODERN SPECIES	138	ENSCAFG00020012229	ENSCAFG00020012245	QDPR (ENSCAFG00020012248)	CLRN2 (ENSCAFG00020012251)	LAP3 (ENSCAFG00020012262)	MED28 (ENSCAFG00020012266)	FAM184B (ENSCAFG00020012270)	ENSCAFG00020012281	MAEA (ENSCAFG00020012285) #15	UVSSA (ENSCAFG00020012302) #16	NKX1-1 (ENSCAFG00020012312) #17	FAM53A (ENSCAFG00020012319) #18	SLBP (ENSCAFG00020012334) #19	TMEM129 (ENSCAFG00020012337) #20	TACC3 (ENSCAFG00020012340) #21	FGFR3 (ENSCAFG00020012349) #22	LETM1 (ENSCAFG00020012352) #23	ENSCAFG00020012359	NSD2 (ENSCAFG00020012364) #24	NELFA (ENSCAFG00020012377) #25	C4orf48 (ENSCAFG00020012395) #26	NAT8L (ENSCAFG00020012398) #27	POLN (ENSCAFG00020012402) #28	HAUS3 (ENSCAFG00020012427) #29	MXD4 (ENSCAFG00020012430) #30	ZFYVE28 (ENSCAFG00020012447) #31	CFAP99 (ENSCAFG00020012449) #32	RNF4 (ENSCAFG00020012490)	FAM193A (ENSCAFG00020012546) #33	TNIP2 (ENSCAFG00020012703) #34	SH3BP2 (ENSCAFG00020012726) #35
Dog	MODERN SPECIES	22	ENSCAFG00845000676	ENSCAFG00845000652	QDPR (ENSCAFG00845000600)	CLRN2 (ENSCAFG00845000538)	LAP3 (ENSCAFG00845000510)	MED28 (ENSCAFG00845000492)	ENSCAFG00845000449	ENSCAFG00845000433	ENSCAFG00845000407 #15	UVSSA (ENSCAFG00845000348) #16	NKX1-1 (ENSCAFG00845000317) #17	FAM53A (ENSCAFG00845000302) #18	SLBP (ENSCAFG00845000261) #19	TMEM129 (ENSCAFG00845000213) #20	TACC3 (ENSCAFG00845013476) #21	FGFR3 (ENSCAFG00845013339) #22	LETM1 (ENSCAFG00845013211) #23	ENSCAFG00845013175	ENSCAFG00845013159	NSD2 (ENSCAFG00845013019) #24	NELFA (ENSCAFG00845012841) #25	C3H4orf48 (ENSCAFG00845012789) #26	NAT8L (ENSCAFG00845012758) #27	POLN (ENSCAFG00845012682) #28	MXD4 (ENSCAFG00845012610) #30	ZFYVE28 (ENSCAFG00845012527) #31	CFAP99 (ENSCAFG00845012463) #32	RNF4 (ENSCAFG00845012388)	FAM193A (ENSCAFG00845012303) #33	TNIP2 (ENSCAFG00845012210) #34	SH3BP2 (ENSCAFG00845012142) #35
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Mustelinae	ANCESTRAL SPECIES	69	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
American mink	DUPLICATION
American mink	MODERN SPECIES	139	SLC26A1 (ENSNVIG00000022268) #8	FGFRL1 (ENSNVIG00000022275) #10	RNF212 (ENSNVIG00000022299) #11	ENSNVIG00000022306 #12	SPON2 (ENSNVIG00000022329) #13	CTBP1 (ENSNVIG00000022335) #14	ENSNVIG00000022343	MAEA (ENSNVIG00000022353) #15	UVSSA (ENSNVIG00000022388) #16	NKX1-1 (ENSNVIG00000022402) #17	FAM53A (ENSNVIG00000022407) #18	SLBP (ENSNVIG00000022417) #19	TMEM129 (ENSNVIG00000000024) #20	ENSNVIG00000000076	ENSNVIG00000000109 #22	ENSNVIG00000000117 #22	LETM1 (ENSNVIG00000000166) #23	NSD2 (ENSNVIG00000000194) #24	NELFA (ENSNVIG00000000511) #25	C4orf48 (ENSNVIG00000000550) #26	NAT8L (ENSNVIG00000000559) #27	POLN (ENSNVIG00000000575) #28	HAUS3 (ENSNVIG00000000614) #29	MXD4 (ENSNVIG00000000639) #30	ENSNVIG00000000648 #31	ENSNVIG00000000660 #31	CFAP99 (ENSNVIG00000000667) #32	RNF4 (ENSNVIG00000000683)	FAM193A (ENSNVIG00000000739) #33	TNIP2 (ENSNVIG00000000789) #34	SH3BP2 (ENSNVIG00000000831) #35
American mink	MODERN SPECIES	139	IDUA (ENSNVIG00000022261) #9	SLC26A1 (ENSNVIG00000022268) #8	FGFRL1 (ENSNVIG00000022275) #10	RNF212 (ENSNVIG00000022299) #11	ENSNVIG00000022306 #12	SPON2 (ENSNVIG00000022329) #13	CTBP1 (ENSNVIG00000022335) #14	ENSNVIG00000022343	MAEA (ENSNVIG00000022353) #15	UVSSA (ENSNVIG00000022388) #16	NKX1-1 (ENSNVIG00000022402) #17	FAM53A (ENSNVIG00000022407) #18	SLBP (ENSNVIG00000022417) #19	TMEM129 (ENSNVIG00000000024) #20	ENSNVIG00000000076	ENSNVIG00000000109 #22	ENSNVIG00000000117 #22	LETM1 (ENSNVIG00000000166) #23	NSD2 (ENSNVIG00000000194) #24	NELFA (ENSNVIG00000000511) #25	C4orf48 (ENSNVIG00000000550) #26	NAT8L (ENSNVIG00000000559) #27	POLN (ENSNVIG00000000575) #28	HAUS3 (ENSNVIG00000000614) #29	MXD4 (ENSNVIG00000000639) #30	ENSNVIG00000000648 #31	ENSNVIG00000000660 #31	CFAP99 (ENSNVIG00000000667) #32	RNF4 (ENSNVIG00000000683)	FAM193A (ENSNVIG00000000739) #33	TNIP2 (ENSNVIG00000000789) #34
Ferret	MODERN SPECIES	334	DGKQ (ENSMPUG00000011237) #7	SLC26A1 (ENSMPUG00000011230) #8	IDUA (ENSMPUG00000011225) #9	FGFRL1 (ENSMPUG00000011220) #10	RNF212 (ENSMPUG00000011212) #11	ENSMPUG00000011191 #12	SPON2 (ENSMPUG00000011185) #13	CTBP1 (ENSMPUG00000011182) #14	MAEA (ENSMPUG00000011174) #15	UVSSA (ENSMPUG00000011171) #16	ENSMPUG00000011168	FAM53A (ENSMPUG00000011145) #18	SLBP (ENSMPUG00000011139) #19	TMEM129 (ENSMPUG00000011130) #20	ENSMPUG00000011062 #21	FGFR3 (ENSMPUG00000011055) #22	LETM1 (ENSMPUG00000011045) #23	NSD2 (ENSMPUG00000011036) #24	NELFA (ENSMPUG00000011031) #25	ENSMPUG00000011023	NAT8L (ENSMPUG00000011019) #27	HAUS3 (ENSMPUG00000011011) #29	MXD4 (ENSMPUG00000010989) #30	ZFYVE28 (ENSMPUG00000010981) #31	CFAP99 (ENSMPUG00000010977) #32	RNF4 (ENSMPUG00000010957)	FAM193A (ENSMPUG00000010949) #33	TNIP2 (ENSMPUG00000010947) #34	SH3BP2 (ENSMPUG00000010942) #35	ADD1 (ENSMPUG00000010933) #36	MFSD10 (ENSMPUG00000010909) #37
Ursidae	ANCESTRAL SPECIES	29	ENSGT00940000159492 #7	ENSGT00390000015494.e #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494.f #9	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00940000164295 #37
Giant Panda	MODERN SPECIES	2	ENSAMEG00000016756	GAK (ENSAMEG00000016761)	TMEM175 (ENSAMEG00000016795)	DGKQ (ENSAMEG00000016800) #7	SLC26A1 (ENSAMEG00000026648) #8	IDUA (ENSAMEG00000016812) #9	ENSAMEG00000029356 #11	ENSAMEG00000024953 #12	SPON2 (ENSAMEG00000023804) #13	CTBP1 (ENSAMEG00000016883) #14	ENSAMEG00000016890 #15	UVSSA (ENSAMEG00000016899) #16	ENSAMEG00000016915 #19	TMEM129 (ENSAMEG00000016921) #20	TACC3 (ENSAMEG00000016924) #21	FGFR3 (ENSAMEG00000014119) #22	LETM1 (ENSAMEG00000014210) #23	NSD2 (ENSAMEG00000014221) #24	NELFA (ENSAMEG00000014240) #25	NAT8L (ENSAMEG00000014278) #27	POLN (ENSAMEG00000014290) #28	HAUS3 (ENSAMEG00000014332) #29	MXD4 (ENSAMEG00000014340) #30	ZFYVE28 (ENSAMEG00000014349) #31	CFAP99 (ENSAMEG00000028653) #32	FAM193A (ENSAMEG00000014383) #33	TNIP2 (ENSAMEG00000014405) #34	SH3BP2 (ENSAMEG00000014415) #35	ADD1 (ENSAMEG00000014449) #36	MFSD10 (ENSAMEG00000014523) #37	NOP14 (ENSAMEG00000014547)
Ursus	ANCESTRAL SPECIES	105	ENSGT00940000159527	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT00390000015494.f #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00940000164052	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00830000128422
American black bear	MODERN SPECIES	4289																FGFR3 (ENSUAMG00000008801) #22	ENSUAMG00000008783 #23
Atlantogenata	ANCESTRAL SPECIES	108	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31
Xenarthra	ANCESTRAL SPECIES	1767																ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23
Armadillo	MODERN SPECIES	1198																FGFR3 (ENSDNOG00000048730) #22	LETM1 (ENSDNOG00000014800) #23
Afrotheria	ANCESTRAL SPECIES	135	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31
Afrotheria_a	ANCESTRAL SPECIES	137	ENSGT00390000015667	ENSGT00940000159492 #7	ENSGT01100000263544.c.a.a.b #8	ENSGT00390000015494 #9	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00390000000377 #16	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.a.b.a #23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31
Hyrax	MODERN SPECIES	5121																FGFR3 (ENSPCAG00000011500) #22	ENSPCAG00000011650 #23
Elephant	MODERN SPECIES	164	TMEM175 (ENSLAFG00000004166)	DGKQ (ENSLAFG00000004169) #7	SLC26A1 (ENSLAFG00000012880) #8	IDUA (ENSLAFG00000012872) #9	FGFRL1 (ENSLAFG00000012522) #10	ENSLAFG00000020574 #12	SPON2 (ENSLAFG00000031358) #13	CTBP1 (ENSLAFG00000016498) #14	MAEA (ENSLAFG00000001960) #15	UVSSA (ENSLAFG00000013335) #16	ENSLAFG00000025171 #17	FAM53A (ENSLAFG00000000267) #18	SLBP (ENSLAFG00000012933) #19	TMEM129 (ENSLAFG00000021484) #20	ENSLAFG00000005224 #21	FGFR3 (ENSLAFG00000012619) #22	LETM1 (ENSLAFG00000022179) #23	NSD2 (ENSLAFG00000008162) #24	NELFA (ENSLAFG00000008168) #25	C4orf48 (ENSLAFG00000029945) #26	NAT8L (ENSLAFG00000030733) #27	POLN (ENSLAFG00000014515) #28	HAUS3 (ENSLAFG00000020863) #29	MXD4 (ENSLAFG00000026709) #30	ENSLAFG00000001042 #31	RNF4 (ENSLAFG00000007382)	ENSLAFG00000004078 #33	ENSLAFG00000028553 #33	ENSLAFG00000027379	SH3BP2 (ENSLAFG00000016902) #35	ADD1 (ENSLAFG00000028230) #36
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00390000015494 #9	ENSGT01100000263544.c.a.a.b #8	ENSGT00510000047107.B	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT01100000263544.c.a.a.b #8	ENSGT00510000047107.B	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000158459.d	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342.l.a #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT01100000263544.c.a.a.b #8	ENSGT00510000047107.B	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000158459.d	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342.l.a #25	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00830000128422
Wallaby	MODERN SPECIES	7302																ENSMEUG00000002856 #22
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT01100000263544.c.a.a.b #8	ENSGT00510000047107.B	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000158459.d	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342.l.a #25	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00830000128422
koala	MODERN SPECIES	43					ENSPCIG00000013555 #11	ENSPCIG00000013556 #12	SPON2 (ENSPCIG00000013557) #13	CTBP1 (ENSPCIG00000013559) #14	MAEA (ENSPCIG00000013562) #15	ENSPCIG00000013563	NKX1-1 (ENSPCIG00000013564) #17	FAM53A (ENSPCIG00000013572) #18	SLBP (ENSPCIG00000013575) #19	TMEM129 (ENSPCIG00000013578) #20	ENSPCIG00000013274	FGFR3 (ENSPCIG00000001901) #22	ENSPCIG00000002025 ##23	NSD2 (ENSPCIG00000002101) #24	NELFA (ENSPCIG00000033023) #25	ENSPCIG00000037120	NAT8L (ENSPCIG00000002186) #27	ENSPCIG00000028500	POLN (ENSPCIG00000028499) #28	HAUS3 (ENSPCIG00000032540) #29	MXD4 (ENSPCIG00000028502) #30	ZFYVE28 (ENSPCIG00000028505) #31	ENSPCIG00000028507 #32	RNF4 (ENSPCIG00000028508)	FAM193A (ENSPCIG00000028509) #33	TNIP2 (ENSPCIG00000001126) #34	SH3BP2 (ENSPCIG00000028511) #35
Common wonbat	MODERN SPECIES	1054	DGKQ (ENSVURG00010021140) #7	IDUA (ENSVURG00010021152) #9	SLC26A1 (ENSVURG00010021160) #8	ENSVURG00010021170	FGFRL1 (ENSVURG00010021177) #10	ENSVURG00010021189 #13	CTBP1 (ENSVURG00010021201) #14	MAEA (ENSVURG00010021222) #15	ENSVURG00010021231	NKX1-1 (ENSVURG00010021242) #17	FAM53A (ENSVURG00010021247) #18	SLBP (ENSVURG00010021255) #19	TMEM129 (ENSVURG00010021261) #20	ENSVURG00010021263 #21	ENSVURG00010021279	FGFR3 (ENSVURG00010021287) #22	ENSVURG00010021331 ##23	NSD2 (ENSVURG00010021411) #24	ENSVURG00010021490	ENSVURG00010021495 #25	ENSVURG00010021502 #27	HAUS3 (ENSVURG00010021506) #29	MXD4 (ENSVURG00010021518) #30	ENSVURG00010021528 #31	ENSVURG00010021535 #32	RNF4 (ENSVURG00010021546)	FAM193A (ENSVURG00010021562) #33	TNIP2 (ENSVURG00010021586) #34	SH3BP2 (ENSVURG00010021621) #35	ADD1 (ENSVURG00010021640) #36	ENSVURG00010021651
Tasmanian devil	MODERN SPECIES	5	SLC26A1 (ENSSHAG00000014844) #8	IDUA (ENSSHAG00000014613) #9	ENSSHAG00000014584	FGFRL1 (ENSSHAG00000013968) #10	ENSSHAG00000012564 #11	ENSSHAG00000012404 #12	SPON2 (ENSSHAG00000012328) #13	CTBP1 (ENSSHAG00000010717) #14	MAEA (ENSSHAG00000006152) #15	ENSSHAG00000003641	FAM53A (ENSSHAG00000014457) #18	SLBP (ENSSHAG00000025869) #19	TMEM129 (ENSSHAG00000013825) #20	ENSSHAG00000013631 #21	ENSSHAG00000027667	FGFR3 (ENSSHAG00000009751) #22	ENSSHAG00000008701 ##23	NSD2 (ENSSHAG00000006750) #24	NELFA (ENSSHAG00000006075) #25	ENSSHAG00000023580 #26	NAT8L (ENSSHAG00000003078) #27	ENSSHAG00000012083 #29	ENSSHAG00000028807 #30	ZFYVE28 (ENSSHAG00000010322) #31	ENSSHAG00000026056 #32	FAM193A (ENSSHAG00000004929) #33	TNIP2 (ENSSHAG00000003911) #34	SH3BP2 (ENSSHAG00000001849) #35	ENSSHAG00000021157	ADD1 (ENSSHAG00000011634) #36	ENSSHAG00000011412
Opossum	MODERN SPECIES	4	DGKQ (ENSMODG00000004482) #7	SLC26A1 (ENSMODG00000004455) #8	IDUA (ENSMODG00000038782) #9	ENSMODG00000042625	FGFRL1 (ENSMODG00000004433) #10	ENSMODG00000027834 #11	ENSMODG00000004399 #12	SPON2 (ENSMODG00000004394) #13	CTBP1 (ENSMODG00000004380) #14	MAEA (ENSMODG00000004354) #15	ENSMODG00000004336	FAM53A (ENSMODG00000004313) #18	SLBP (ENSMODG00000004304) #19	TMEM129 (ENSMODG00000004290) #20	ENSMODG00000004284 #21	FGFR3 (ENSMODG00000004268) #22	ENSMODG00000004184	ENSMODG00000004250 ##23	NSD2 (ENSMODG00000004162) #24	NELFA (ENSMODG00000004110) #25	ENSMODG00000024702 #26	NAT8L (ENSMODG00000004088) #27	POLN (ENSMODG00000004074) #28	MXD4 (ENSMODG00000004033) #30	ZFYVE28 (ENSMODG00000004017) #31	ENSMODG00000050224 #32	RNF4 (ENSMODG00000003938)	FAM193A (ENSMODG00000003925) #33	TNIP2 (ENSMODG00000003892) #34	SH3BP2 (ENSMODG00000003843) #35	ADD1 (ENSMODG00000003815) #36
Platypus	MODERN SPECIES	15	NOP14 (ENSOANG00000005809)	ENSOANG00000001782	ADD1 (ENSOANG00000001783) #36	SH3BP2 (ENSOANG00000011388) #35	ENSOANG00000029063 #34	FAM193A (ENSOANG00000015175) #33	RNF4 (ENSOANG00000045071)	ENSOANG00000049568 #32	ZFYVE28 (ENSOANG00000039812) #31	ENSOANG00000041013	MXD4 (ENSOANG00000043646) #30	NAT8L (ENSOANG00000039001) #27	NELFA (ENSOANG00000044855) #25	NSD2 (ENSOANG00000014321) #24	LETM1 (ENSOANG00000005820) #23	FGFR3 (ENSOANG00000003354) #22	ENSOANG00000046409 #21
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Cryptodira	DUPLICATION
Cryptodira	ANCESTRAL SPECIES																	ENSGT00940000159880.g #22
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000159880.g #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000159880.g #22
Abingdon island giant tortoise	MODERN SPECIES	72															ENSCABG00000016573	ENSCABG00000016546 #22	ENSCABG00000016535	ENSCABG00000016526	ENSCABG00000016521
Goode s thornscrub tortoise	MODERN SPECIES	153					ENSGEVG00005015436	ENSGEVG00005015420	ENSGEVG00005015357	ENSGEVG00005015338	ENSGEVG00005015324	ENSGEVG00005015300	ENSGEVG00005015257	ENSGEVG00005015215	ENSGEVG00005015182	ENSGEVG00005015107	ENSGEVG00005015048	ENSGEVG00005014744 #22	ENSGEVG00005014682	ENSGEVG00005014652	ENSGEVG00005014560	ENSGEVG00005014487	ENSGEVG00005014395	ENSGEVG00005014251	ENSGEVG00005014219	ENSGEVG00005014176	ENSGEVG00005014148
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.h #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Chinese turtle	MODERN SPECIES	2005												FAM53A (ENSPSIG00000012158) #18	TMEM129 (ENSPSIG00000011706) #20	TACC3 (ENSPSIG00000011605) #21	ENSPSIG00000001733	FGFR3 (ENSPSIG00000009934) #22	ENSPSIG00000008785 ##23	NSD2 (ENSPSIG00000006591) #24	NELFA (ENSPSIG00000017673) #25	ENSPSIG00000017624 #26	C4orf48 (ENSPSIG00000017545) #26	NAT8L (ENSPSIG00000017371) #27	ENSPSIG00000001726	POLN (ENSPSIG00000016926) #28	HAUS3 (ENSPSIG00000016557) #29	MXD4 (ENSPSIG00000016320) #30	ENSPSIG00000015986	ENSPSIG00000001717	ZFYVE28 (ENSPSIG00000015824) #31	CFAP99 (ENSPSIG00000015452) #32	RNF4 (ENSPSIG00000014750)
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.h #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581.d #36
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00940000172282	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.h #22	ENSGT00950000183167.b ##23	ENSGT00940000157429.m #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00960000189789	ENSGT00950000182932.B #27	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581.d #36
Goode s thornscrub tortoise	MODERN SPECIES	19	POLR1A (ENSGEVG00005001447)	ST3GAL5 (ENSGEVG00005001482)	ATOH8 (ENSGEVG00005001500)	FGFRL1 (ENSGEVG00005001514) #10	ENSGEVG00005001538 #12	SPON2 (ENSGEVG00005001580) #13	ENSGEVG00005001606	CTBP1 (ENSGEVG00005001634) #14	MAEA (ENSGEVG00005001690) #15	ENSGEVG00005001722	ENSGEVG00005001741	FAM53A (ENSGEVG00005001753) #18	SLBP (ENSGEVG00005001772) #19	TMEM129 (ENSGEVG00005001790) #20	TACC3 (ENSGEVG00005001810) #21	ENSGEVG00005001847 #22	ENSGEVG00005001880 ##23	NSD2 (ENSGEVG00005001909) #24	NELFA (ENSGEVG00005001927) #25	C4orf48 (ENSGEVG00005001945) #26	ENSGEVG00005001957	NAT8L (ENSGEVG00005001962) #27	HAUS3 (ENSGEVG00005001972) #29	MXD4 (ENSGEVG00005001978) #30	ZFYVE28 (ENSGEVG00005002043) #31	CFAP99 (ENSGEVG00005002179) #32	RNF4 (ENSGEVG00005002218)	FAM193A (ENSGEVG00005002232) #33	TNIP2 (ENSGEVG00005002252) #34	SH3BP2 (ENSGEVG00005002263) #35	ADD1 (ENSGEVG00005002310) #36
Abingdon island giant tortoise	MODERN SPECIES	2611															ENSCABG00000006908	ENSCABG00000006895 #22	ENSCABG00000006879 ##23	ENSCABG00000006873 #24	SLIT2 (ENSCABG00000006833)	PACRGL (ENSCABG00000006828)	KCNIP4 (ENSCABG00000006825)
Emydidae	ANCESTRAL SPECIES	1	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.h #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581.d #36
painted turtle	MODERN SPECIES	725	PTCD3 (ENSCPBG00000001152)	POLR1A (ENSCPBG00000001115)	ST3GAL5 (ENSCPBG00000001089)	ATOH8 (ENSCPBG00000001027)	FGFRL1 (ENSCPBG00000001000) #10	ENSCPBG00000000981 #12	SPON2 (ENSCPBG00000000965) #13	CTBP1 (ENSCPBG00000000892) #14	MAEA (ENSCPBG00000000853) #15	ENSCPBG00000000824	ENSCPBG00000000801	FAM53A (ENSCPBG00000000763) #18	SLBP (ENSCPBG00000000746) #19	TMEM129 (ENSCPBG00000000738) #20	TACC3 (ENSCPBG00000000303) #21	FGFR3 (ENSCPBG00000025109) #22	ENSCPBG00000025105 ##23	ENSCPBG00000025103 #24	ENSCPBG00000025097 #24	NELFA (ENSCPBG00000025095) #25	ENSCPBG00000025091 #26	NAT8L (ENSCPBG00000025087) #27	POLN (ENSCPBG00000025017) #28	HAUS3 (ENSCPBG00000025003) #29	MXD4 (ENSCPBG00000025001) #30	ZFYVE28 (ENSCPBG00000024998) #31	ENSCPBG00000024996
Three-toed box turtle	MODERN SPECIES	26	PTCD3 (ENSTMTG00000002726)	POLR1A (ENSTMTG00000002551)	ST3GAL5 (ENSTMTG00000002504)	ATOH8 (ENSTMTG00000002498)	FGFRL1 (ENSTMTG00000002490) #10	ENSTMTG00000002481 #12	SPON2 (ENSTMTG00000002478) #13	CTBP1 (ENSTMTG00000002467) #14	MAEA (ENSTMTG00000002462) #15	ENSTMTG00000002454	NKX1-1 (ENSTMTG00000002450) #17	FAM53A (ENSTMTG00000002446) #18	SLBP (ENSTMTG00000002441) #19	TMEM129 (ENSTMTG00000002438) #20	TACC3 (ENSTMTG00000002422) #21	FGFR3 (ENSTMTG00000002395) #22	ENSTMTG00000002384 ##23	NSD2 (ENSTMTG00000002368) #24	NELFA (ENSTMTG00000002358) #25	ENSTMTG00000002350 #26	C4orf48 (ENSTMTG00000002341) #26	NAT8L (ENSTMTG00000002337) #27	POLN (ENSTMTG00000002310) #28	HAUS3 (ENSTMTG00000002295) #29	MXD4 (ENSTMTG00000002289) #30	ZFYVE28 (ENSTMTG00000002279) #31	CFAP99 (ENSTMTG00000002255) #32	FAM193A (ENSTMTG00000002228) #33	TNIP2 (ENSTMTG00000002209) #34	SH3BP2 (ENSTMTG00000002197) #35	ADD1 (ENSTMTG00000002162) #36
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Australian saltwater crocodile	MODERN SPECIES	65	IMMT (ENSCPRG00005000573)	PTCD3 (ENSCPRG00005000603)	POLR1A (ENSCPRG00005000706)	ST3GAL5 (ENSCPRG00005001127)	FGFRL1 (ENSCPRG00005001162) #10	ENSCPRG00005001189 #12	SPON2 (ENSCPRG00005001192) #13	CTBP1 (ENSCPRG00005001249) #14	MAEA (ENSCPRG00005001284) #15	ENSCPRG00005001306	FAM53A (ENSCPRG00005001335) #18	SLBP (ENSCPRG00005001341) #19	ENSCPRG00005001347 #19	TMEM129 (ENSCPRG00005001354) #20	TACC3 (ENSCPRG00005001402) #21	FGFR3 (ENSCPRG00005001439) #22	ENSCPRG00005001480 ##23	NSD2 (ENSCPRG00005001494) #24	NELFA (ENSCPRG00005001509) #25	C4orf48 (ENSCPRG00005001551) #26	NAT8L (ENSCPRG00005001582) #27	POLN (ENSCPRG00005001601) #28	HAUS3 (ENSCPRG00005001652) #29	MXD4 (ENSCPRG00005001655) #30	ZFYVE28 (ENSCPRG00005001725) #31	CFAP99 (ENSCPRG00005001738) #32	RNF4 (ENSCPRG00005001756)	FAM193A (ENSCPRG00005001785) #33	TNIP2 (ENSCPRG00005001931) #34	SH3BP2 (ENSCPRG00005001952) #35	ADD1 (ENSCPRG00005001982) #36
Aves	ANCESTRAL SPECIES	3	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
African ostrich	MODERN SPECIES	1016	POLR1A (ENSSCUG00000015443)	ST3GAL5 (ENSSCUG00000015448)	ENSSCUG00000015450	FGFRL1 (ENSSCUG00000015454) #10	ENSSCUG00000015455 #12	SPON2 (ENSSCUG00000015460) #13	CTBP1 (ENSSCUG00000015468) #14	MAEA (ENSSCUG00000015471) #15	ENSSCUG00000015472	FAM53A (ENSSCUG00000015478) #18	SLBP (ENSSCUG00000015479) #19	ENSSCUG00000015480 #19	TMEM129 (ENSSCUG00000015481) #20	TACC3 (ENSSCUG00000015483) #21	ENSSCUG00000015487	FGFR3 (ENSSCUG00000015489) #22	ENSSCUG00000015494 ##23	NSD2 (ENSSCUG00000015496) #24	NELFA (ENSSCUG00000015506) #25	ENSSCUG00000015507 #26	ENSSCUG00000015508	C4orf48 (ENSSCUG00000015511) #26	ENSSCUG00000015512	NAT8L (ENSSCUG00000015515) #27	POLN (ENSSCUG00000015522) #28	HAUS3 (ENSSCUG00000015531) #29	MXD4 (ENSSCUG00000015532) #30	ZFYVE28 (ENSSCUG00000015535) #31	CFAP99 (ENSSCUG00000015539) #32	RNF4 (ENSSCUG00000015543)	FAM193A (ENSSCUG00000015560) #33
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Phasianidae	DUPLICATION
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000159880.i #22
Japanese quail	MODERN SPECIES	545															ENSCJPG00005002759	ENSCJPG00005002757 #22
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.j #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880.j #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Chicken	MODERN SPECIES	33	ST3GAL5 (ENSGALG00010017751)	ATOH8 (ENSGALG00010017718)	FGFRL1 (ENSGALG00010017706) #10	RNF212 (ENSGALG00010017689) #11	TMED11 (ENSGALG00010017682) #12	SPON2 (ENSGALG00010017676) #13	CTBP1 (ENSGALG00010017665) #14	MAEA (ENSGALG00010017646) #15	UVSSA (ENSGALG00010016107)	NKX1-1 (ENSGALG00010016036) #17	FAM53A (ENSGALG00010016631) #18	SLBP (ENSGALG00010016616) #19	ENSGALG00010016603 #19	TMEM129 (ENSGALG00010016592) #20	TACC3 (ENSGALG00010016211) #21	FGFR3 (ENSGALG00010016940) #22	ENSGALG00010016933	LETM1 (ENSGALG00010016924) ##23	NSD2 (ENSGALG00010016910) #24	NELFA (ENSGALG00010016741) #25	ENSGALG00010016735 #26	C4orf48 (ENSGALG00010016731) #26	NAT8L (ENSGALG00010017631) #27	POLN (ENSGALG00010017619) #28	HAUS3 (ENSGALG00010017613) #29	MXD4 (ENSGALG00010017600) #30	ZFYVE28 (ENSGALG00010017586) #31	CFAP99 (ENSGALG00010017561) #32	RNF4 (ENSGALG00010017547)	FAM193A (ENSGALG00010017533) #33	TNIP2 (ENSGALG00010017513) #34
Turkey	MODERN SPECIES	24	ENSMGAG00000013014 #33	ENSMGAG00000017780	ENSMGAG00000013021 #32	ENSMGAG00000013023 #31	ENSMGAG00000020900 #31	ENSMGAG00000021919	ENSMGAG00000017584 #30	ENSMGAG00000013033 #29	NAT8L (ENSMGAG00000016877) #27	ENSMGAG00000013044 #25	ENSMGAG00000020055 #26	ENSMGAG00000019205 #26	ENSMGAG00000013051 #24	ENSMGAG00000020247 #24	ENSMGAG00000013057 ##23	ENSMGAG00000013059 #22	ENSMGAG00000018675	ENSMGAG00000020226	ENSMGAG00000017730	ENSMGAG00000012664	ENSMGAG00000021515	ENSMGAG00000017053	ENSMGAG00000019461	ENSMGAG00000012687	ENSMGAG00000016617	WDR1 (ENSMGAG00000012690)	ENSMGAG00000022219	ENSMGAG00000012700	ENSMGAG00000012697	OTOP1 (ENSMGAG00000012701)	ZBTB49 (ENSMGAG00000012706)
Japanese quail	MODERN SPECIES	22	ST3GAL5 (ENSCJPG00005004831)	ATOH8 (ENSCJPG00005004828)	FGFRL1 (ENSCJPG00005004823) #10	RNF212 (ENSCJPG00005004815) #11	ENSCJPG00005004814 #12	SPON2 (ENSCJPG00005004812) #13	CTBP1 (ENSCJPG00005004796) #14	MAEA (ENSCJPG00005004779) #15	ENSCJPG00005004776	NKX1-1 (ENSCJPG00005004773) #17	FAM53A (ENSCJPG00005004768) #18	SLBP (ENSCJPG00005004762) #19	ENSCJPG00005004758 #19	TMEM129 (ENSCJPG00005004755) #20	TACC3 (ENSCJPG00005004752) #21	ENSCJPG00005001291 #22	ENSCJPG00005001087 ##23	NSD2 (ENSCJPG00005000902) #24	NELFA (ENSCJPG00005000857) #25	ENSCJPG00005000849 #26	C4orf48 (ENSCJPG00005000845) #26	NAT8L (ENSCJPG00005000839) #27	POLN (ENSCJPG00005000822) #28	HAUS3 (ENSCJPG00005000834) #29	MXD4 (ENSCJPG00005000809) #30	ZFYVE28 (ENSCJPG00005000799) #31	CFAP99 (ENSCJPG00005000780) #32	RNF4 (ENSCJPG00005000772)	FAM193A (ENSCJPG00005000765) #33	TNIP2 (ENSCJPG00005000763) #34	SH3BP2 (ENSCJPG00005000067) #35
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Pink-footed goose	MODERN SPECIES	7	ATOH8 (ENSABRG00000009126)	FGFRL1 (ENSABRG00000009111) #10	RNF212 (ENSABRG00000009079) #11	ENSABRG00000009069 #12	SPON2 (ENSABRG00000009053) #13	CTBP1 (ENSABRG00000009016) #14	MAEA (ENSABRG00000008991) #15	ENSABRG00000008962	NKX1-1 (ENSABRG00000008955) #17	FAM53A (ENSABRG00000008927) #18	SLBP (ENSABRG00000008914) #19	ENSABRG00000008878 #19	TMEM129 (ENSABRG00000008871) #20	TACC3 (ENSABRG00000008855) #21	ENSABRG00000008817	FGFR3 (ENSABRG00000008800) #22	ENSABRG00000008782 ##23	NSD2 (ENSABRG00000008744) #24	NELFA (ENSABRG00000008734) #25	ENSABRG00000008727 #26	NAT8L (ENSABRG00000008714) #27	POLN (ENSABRG00000008656) #28	HAUS3 (ENSABRG00000008704) #29	MXD4 (ENSABRG00000008646) #30	ZFYVE28 (ENSABRG00000008507) #31	CFAP99 (ENSABRG00000008431) #32	RNF4 (ENSABRG00000008422)	FAM193A (ENSABRG00000007852) #33	TNIP2 (ENSABRG00000007791) #34	SH3BP2 (ENSABRG00000007608) #35	ADD1 (ENSABRG00000006412) #36
Duck	MODERN SPECIES	22	ST3GAL5 (ENSAPLG00000014680)	ATOH8 (ENSAPLG00000022131)	FGFRL1 (ENSAPLG00000014983) #10	ENSAPLG00000019361	ENSAPLG00000019372	ENSAPLG00000015003 #12	SPON2 (ENSAPLG00000015017) #13	CTBP1 (ENSAPLG00000015635) #14	MAEA (ENSAPLG00000015852) #15	ENSAPLG00000015894	ENSAPLG00000021364	FAM53A (ENSAPLG00000015975) #18	SLBP (ENSAPLG00000015989) #19	TMEM129 (ENSAPLG00000016182) #20	TACC3 (ENSAPLG00000016198) #21	FGFR3 (ENSAPLG00000016333) #22	ENSAPLG00000003508 ##23	NSD2 (ENSAPLG00000003770) #24	NELFA (ENSAPLG00000004120) #25	ENSAPLG00000016870 #26	C4orf48 (ENSAPLG00000027604) #26	NAT8L (ENSAPLG00000004458) #27	POLN (ENSAPLG00000004531) #28	HAUS3 (ENSAPLG00000004991) #29	MXD4 (ENSAPLG00000004997) #30	ZFYVE28 (ENSAPLG00000004999) #31	CFAP99 (ENSAPLG00000005144) #32	RNF4 (ENSAPLG00000005244)	FAM193A (ENSAPLG00000005276) #33	TNIP2 (ENSAPLG00000005556) #34	SH3BP2 (ENSAPLG00000005759) #35
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318.l.a	ENSGT00390000010318.l.b	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Kakapo	MODERN SPECIES	24	ST3GAL5 (ENSSHBG00005001046)	ATOH8 (ENSSHBG00005001047)	FGFRL1 (ENSSHBG00005013918) #10	ENSSHBG00005013933 #12	SPON2 (ENSSHBG00005013942) #13	CTBP1 (ENSSHBG00005013962) #14	MAEA (ENSSHBG00005014007) #15	ENSSHBG00005014033	ENSSHBG00005014047	NKX1-1 (ENSSHBG00005014065) #17	FAM53A (ENSSHBG00005014082) #18	SLBP (ENSSHBG00005014090) #19	ENSSHBG00005014102 #19	TMEM129 (ENSSHBG00005014117) #20	TACC3 (ENSSHBG00005014126) #21	FGFR3 (ENSSHBG00005014171) #22	ENSSHBG00005014181 ##23	NSD2 (ENSSHBG00005014199) #24	NELFA (ENSSHBG00005014227) #25	C4orf48 (ENSSHBG00005014241) #26	NAT8L (ENSSHBG00005014256) #27	HAUS3 (ENSSHBG00005014273) #29	MXD4 (ENSSHBG00005014280) #30	ENSSHBG00005014294 #31	ENSSHBG00005014299 #31	CFAP99 (ENSSHBG00005014309) #32	RNF4 (ENSSHBG00005014316)	ENSSHBG00005014326	ENSSHBG00005014338	ENSSHBG00005014358	FAM193A (ENSSHBG00005014440) #33
Golden eagle	MODERN SPECIES		POLR1A (ENSACCG00020000087)	ST3GAL5 (ENSACCG00020000088)	ATOH8 (ENSACCG00020000089)	FGFRL1 (ENSACCG00020000090) #10	ENSACCG00020000091 #12	SPON2 (ENSACCG00020000092) #13	CTBP1 (ENSACCG00020000093) #14	MAEA (ENSACCG00020000094) #15	ENSACCG00020000095	NKX1-1 (ENSACCG00020000096) #17	FAM53A (ENSACCG00020000097) #18	SLBP (ENSACCG00020000098) #19	ENSACCG00020000099 #19	TMEM129 (ENSACCG00020000100) #20	TACC3 (ENSACCG00020000101) #21	FGFR3 (ENSACCG00020000102) #22	ENSACCG00020000103 ##23	NSD2 (ENSACCG00020000104) #24	NELFA (ENSACCG00020000106) #25	ENSACCG00020000107 #26	C4orf48 (ENSACCG00020000108) #26	ENSACCG00020000109 #27	ENSACCG00020000110 #27	HAUS3 (ENSACCG00020000111) #29	MXD4 (ENSACCG00020000112) #30	ZFYVE28 (ENSACCG00020000113) #31	CFAP99 (ENSACCG00020000114) #32	ENSACCG00020000115	ENSACCG00020000116	FAM193A (ENSACCG00020000117) #33	TNIP2 (ENSACCG00020000118) #34
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36
Great tit	MODERN SPECIES	23	POLR1A (ENSPMJG00000016785)	ST3GAL5 (ENSPMJG00000016784)	FGFRL1 (ENSPMJG00000016781) #10	RNF212 (ENSPMJG00000016778) #11	ENSPMJG00000016777 #12	SPON2 (ENSPMJG00000016776) #13	CTBP1 (ENSPMJG00000016774) #14	MAEA (ENSPMJG00000016773) #15	ENSPMJG00000016772	NKX1-1 (ENSPMJG00000016771) #17	FAM53A (ENSPMJG00000016765) #18	SLBP (ENSPMJG00000016763) #19	TMEM129 (ENSPMJG00000016762) #20	TACC3 (ENSPMJG00000016761) #21	ENSPMJG00000016756	FGFR3 (ENSPMJG00000016755) #22	ENSPMJG00000016753 ##23	NELFA (ENSPMJG00000016751) #25	NSD2 (ENSPMJG00000016750) #24	ENSPMJG00000016749 #26	NAT8L (ENSPMJG00000016748) #27	POLN (ENSPMJG00000016747) #28	HAUS3 (ENSPMJG00000016746) #29	MXD4 (ENSPMJG00000016745) #30	ZFYVE28 (ENSPMJG00000016738) #31	CFAP99 (ENSPMJG00000016737) #32	RNF4 (ENSPMJG00000016736)	FAM193A (ENSPMJG00000016722) #33	TNIP2 (ENSPMJG00000016720) #34	SH3BP2 (ENSPMJG00000016718) #35	ADD1 (ENSPMJG00000016716) #36
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581.a #36
Flycatcher	MODERN SPECIES	22	POLR1A (ENSFALG00000010082)	ST3GAL5 (ENSFALG00000010076)	FGFRL1 (ENSFALG00000010071) #10	RNF212 (ENSFALG00000026442) #11	ENSFALG00000010064 #12	SPON2 (ENSFALG00000010062) #13	CTBP1 (ENSFALG00000010053) #14	MAEA (ENSFALG00000010037) #15	ENSFALG00000010020	ENSFALG00000024515	FAM53A (ENSFALG00000010014) #18	SLBP (ENSFALG00000010003) #19	ENSFALG00000009994 #19	TMEM129 (ENSFALG00000009990) #20	TACC3 (ENSFALG00000009974) #21	FGFR3 (ENSFALG00000009957) #22	ENSFALG00000009940 ##23	NSD2 (ENSFALG00000009928) #24	NELFA (ENSFALG00000024492) #25	ENSFALG00000023813 #26	C4orf48 (ENSFALG00000009893) #26	NAT8L (ENSFALG00000009890) #27	POLN (ENSFALG00000009880) #28	HAUS3 (ENSFALG00000009872) #29	MXD4 (ENSFALG00000028128) #30	ZFYVE28 (ENSFALG00000009861) #31	CFAP99 (ENSFALG00000009853) #32	RNF4 (ENSFALG00000028670)	FAM193A (ENSFALG00000009833) #33	TNIP2 (ENSFALG00000009830) #34	SH3BP2 (ENSFALG00000009826) #35
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581.a #36
Medium ground finch	MODERN SPECIES	161								CTBP1 (ENSGFOG00000007273) #14	MAEA (ENSGFOG00000007257) #15	ENSGFOG00000007249	FAM53A (ENSGFOG00000007246) #18	SLBP (ENSGFOG00000007240) #19	ENSGFOG00000007232 #19	TMEM129 (ENSGFOG00000007227) #20	TACC3 (ENSGFOG00000007220) #21	FGFR3 (ENSGFOG00000004862) #22	ENSGFOG00000004673 ##23
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000008738.t #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT01080000257700	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35
Zebra finch	MODERN SPECIES	25	ST3GAL5 (ENSTGUG00000010696)	ATOH8 (ENSTGUG00000010695)	FGFRL1 (ENSTGUG00000010690) #10	RNF212 (ENSTGUG00000010685) #11	ENSTGUG00000010674 #12	SPON2 (ENSTGUG00000010671) #13	CTBP1 (ENSTGUG00000010662) #14	MAEA (ENSTGUG00000010646) #15	ENSTGUG00000010640	NKX1-1 (ENSTGUG00000029299) #17	FAM53A (ENSTGUG00000010633) #18	SLBP (ENSTGUG00000010626) #19	ENSTGUG00000026053 #19	TMEM129 (ENSTGUG00000010623) #20	TACC3 (ENSTGUG00000010612) #21	FGFR3 (ENSTGUG00000010583) #22	ENSTGUG00000010578	ENSTGUG00000010569 ##23	NSD2 (ENSTGUG00000010558) #24	NELFA (ENSTGUG00000010548) #25	ENSTGUG00000022999 #26	C4orf48 (ENSTGUG00000010545) #26	NAT8L (ENSTGUG00000027909) #27	POLN (ENSTGUG00000010536) #28	MXD4 (ENSTGUG00000010530) #30	ZFYVE28 (ENSTGUG00000010524) #31	CFAP99 (ENSTGUG00000010519) #32	RNF4 (ENSTGUG00000027704)	FAM193A (ENSTGUG00000010507) #33	TNIP2 (ENSTGUG00000010505) #34	SH3BP2 (ENSTGUG00000010489) #35
Common canary	MODERN SPECIES	2	POLR1A (ENSSCAG00000014945)	ST3GAL5 (ENSSCAG00000014951)	ENSSCAG00000014958	FGFRL1 (ENSSCAG00000014969) #10	ENSSCAG00000014981 #12	SPON2 (ENSSCAG00000014992) #13	CTBP1 (ENSSCAG00000015001) #14	MAEA (ENSSCAG00000015016) #15	ENSSCAG00000015024	NKX1-1 (ENSSCAG00000015033) #17	FAM53A (ENSSCAG00000015042) #18	SLBP (ENSSCAG00000015046) #19	ENSSCAG00000015050 #19	TMEM129 (ENSSCAG00000015058) #20	TACC3 (ENSSCAG00000015066) #21	FGFR3 (ENSSCAG00000015145) #22	ENSSCAG00000015296	ENSSCAG00000015304 ##23	NSD2 (ENSSCAG00000015307) #24	NELFA (ENSSCAG00000015311) #25	ENSSCAG00000015313 #26	C4orf48 (ENSSCAG00000015314) #26	NAT8L (ENSSCAG00000015317) #27	HAUS3 (ENSSCAG00000015319) #29	MXD4 (ENSSCAG00000015320) #30	ZFYVE28 (ENSSCAG00000015322) #31	CFAP99 (ENSSCAG00000015324) #32	RNF4 (ENSSCAG00000015329)	FAM193A (ENSSCAG00000015363) #33	TNIP2 (ENSSCAG00000015434) #34	SH3BP2 (ENSSCAG00000015437) #35
Lepidosauria	ANCESTRAL SPECIES	80	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00940000172282	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904.o #29	ENSGT00940000160120 #30	ENSGT00940000157217 #31	ENSGT00500000045231 #32
tuatara	MODERN SPECIES	464	RNF4 (ENSSPUG00000015569)	ENSSPUG00000015581 #31	ENSSPUG00000015587	ENSSPUG00000015592 #31	ENSSPUG00000015598 #31	CFAP99 (ENSSPUG00000015612) #32	MXD4 (ENSSPUG00000015621) #30	HAUS3 (ENSSPUG00000015629) #29	POLN (ENSSPUG00000015690) #28	NAT8L (ENSSPUG00000015883) #27	C4orf48 (ENSSPUG00000015889) #26	NELFA (ENSSPUG00000015899) #25	ENSSPUG00000015905 #24	ENSSPUG00000015928 #24	ENSSPUG00000015956 ##23	FGFR3 (ENSSPUG00000015970) #22	TACC3 (ENSSPUG00000015987) #21	TMEM129 (ENSSPUG00000015996) #20	SLBP (ENSSPUG00000016007) #19	FAM53A (ENSSPUG00000016012) #18	ENSSPUG00000016020	ENSSPUG00000016031	MAEA (ENSSPUG00000016045) #15	CTBP1 (ENSSPUG00000016066) #14
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000016051	ENSGT00390000006051	ENSGT00940000158961	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000160120 #30	ENSGT00500000045231 #32	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000157727	ENSGT00890000139463.b.a	ENSGT00390000014726	ENSGT00940000159802	ENSGT00940000160066	ENSGT00940000153692.B
Laterata	ANCESTRAL SPECIES		ENSGT00390000016051	ENSGT00390000006051	ENSGT00940000158961	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00940000159900 #13	ENSGT00940000157061.a.j #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738.s #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000160120 #30	ENSGT00500000045231 #32	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000157727	ENSGT00890000139463.b.a	ENSGT00390000014726	ENSGT00940000159802	ENSGT00940000160066	ENSGT00940000153692.B
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000003670	ENSPMRG00000003678	FGFRL1 (ENSPMRG00000003682) #10	SPON2 (ENSPMRG00000003689) #13	ENSPMRG00000003704 #14	ENSPMRG00000003758 #14	ENSPMRG00000003773 #15	ENSPMRG00000003785 #15	ENSPMRG00000003791	NKX1-1 (ENSPMRG00000003811) #17	ENSPMRG00000003812	FAM53A (ENSPMRG00000003814) #18	SLBP (ENSPMRG00000003818) #19	TMEM129 (ENSPMRG00000003821) #20	TACC3 (ENSPMRG00000003823) #21	FGFR3 (ENSPMRG00000003828) #22	ENSPMRG00000003835 ##23	NSD2 (ENSPMRG00000003856) #24	NELFA (ENSPMRG00000003931) #25	C4orf48 (ENSPMRG00000003949) #26	NAT8L (ENSPMRG00000003953) #27	MXD4 (ENSPMRG00000003956) #30	CFAP99 (ENSPMRG00000003968) #32	ENSPMRG00000003974	ZFAND4 (ENSPMRG00000003978)	ENSPMRG00000003987	ENSPMRG00000003993	ENSPMRG00000003999	ENSPMRG00000004005	ENSPMRG00000004021	RBP3 (ENSPMRG00000004028)
Argentine black and white tegu	MODERN SPECIES	44	KCTD4 (ENSSMRG00000022798)	GTF2F2 (ENSSMRG00000022797)	TPT1 (ENSSMRG00000022795)	ENSSMRG00000022794	ST3GAL5 (ENSSMRG00000022793)	ATOH8 (ENSSMRG00000022792)	FGFRL1 (ENSSMRG00000022790) #10	SPON2 (ENSSMRG00000022788) #13	CTBP1 (ENSSMRG00000022787) #14	MAEA (ENSSMRG00000022785) #15	ENSSMRG00000022784	NKX1-1 (ENSSMRG00000022783) #17	SLBP (ENSSMRG00000022781) #19	TMEM129 (ENSSMRG00000022780) #20	ENSSMRG00000022779	FGFR3 (ENSSMRG00000022778) #22	ENSSMRG00000022777	ENSSMRG00000022776	NAT8L (ENSSMRG00000022775) #27	C4orf48 (ENSSMRG00000022774) #26	NELFA (ENSSMRG00000022773) #25	NSD2 (ENSSMRG00000022772) #24	ENSSMRG00000022771 ##23	ENSSMRG00000022769	ENSSMRG00000022768	ENSSMRG00000022767	ENSSMRG00000022766	RBP3 (ENSSMRG00000022765)	GDF2 (ENSSMRG00000022764)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00950000183015.B.b	ENSGT00940000153692.B	ENSGT00940000160066	ENSGT00940000159802	ENSGT00390000014726	ENSGT00890000139463.b.a	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00500000045231 #32	ENSGT00940000160120 #30	ENSGT00950000182932.B #27	ENSGT00390000013043 #26	ENSGT00390000005342 #25	ENSGT00940000157429 #24	ENSGT00950000183167.b ##23	ENSGT00940000159880 #22	ENSGT00940000158858 #21	ENSGT00390000008738.s #19	ENSGT00940000162861 #17	ENSGT00940000164256	ENSGT00940000153203.B #15	ENSGT00940000157061.a.j #14	ENSGT00940000159900 #13	ENSGT00940000156736 #10	ENSGT00940000161151	ENSGT00940000157929	ENSGT00940000158961	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051	ENSGT00940000163575
Elapidae	ANCESTRAL SPECIES	13	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000158057	ENSGT00390000014056	ENSGT01000000218120	ENSGT00940000158274	ENSGT00500000044923	ENSGT00950000182937.A.a	ENSGT00390000015682	ENSGT00940000160120 #30	ENSGT00950000182932.B #27	ENSGT00390000013043 #26	ENSGT00390000005342 #25	ENSGT00940000157429 #24	ENSGT00950000183167.b ##23	ENSGT00940000159880 #22	ENSGT00940000158858 #21	ENSGT00390000008738.s #19	ENSGT00940000162861 #17	ENSGT00940000164256	ENSGT00940000153203.B #15	ENSGT00940000157061.a.j #14	ENSGT00940000159900 #13	ENSGT00940000156736 #10	ENSGT00940000161151	ENSGT00940000157929	ENSGT00940000158961	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051	ENSGT00940000163575
Indian cobra	MODERN SPECIES	5	DRGX (ENSNNAG00000013325)	ERCC6 (ENSNNAG00000013113)	CXCL12 (ENSNNAG00000013076)	ENSNNAG00000013052	PAOX (ENSNNAG00000013002)	MTG1 (ENSNNAG00000012981)	CHUK (ENSNNAG00000011971)	COG3 (ENSNNAG00000008861)	MXD4 (ENSNNAG00000008676) #30	NAT8L (ENSNNAG00000008658) #27	C4orf48 (ENSNNAG00000008605) #26	NELFA (ENSNNAG00000008587) #25	ENSNNAG00000008473 #24	ENSNNAG00000008402 #24	ENSNNAG00000008343 ##23	FGFR3 (ENSNNAG00000008222) #22	ENSNNAG00000008186	SLBP (ENSNNAG00000008157) #19	NKX1-1 (ENSNNAG00000008125) #17	ENSNNAG00000008082	MAEA (ENSNNAG00000008048) #15	ENSNNAG00000008030	CTBP1 (ENSNNAG00000007965) #14	SPON2 (ENSNNAG00000007927) #13	FGFRL1 (ENSNNAG00000007904) #10	ATOH8 (ENSNNAG00000007882)	ST3GAL5 (ENSNNAG00000007849)	SLC25A30 (ENSNNAG00000007807)	TPT1 (ENSNNAG00000007771)	KCTD4 (ENSNNAG00000007740)	GTF2F2 (ENSNNAG00000007652)
Elapidae_a	ANCESTRAL SPECIES	102	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000158057	ENSGT00390000014056	ENSGT01000000218120	ENSGT00940000158274	ENSGT00500000044923	ENSGT00950000182937.A.a	ENSGT00390000015682	ENSGT00940000160120 #30	ENSGT00950000182932.B #27	ENSGT00390000013043 #26	ENSGT00390000005342 #25	ENSGT00940000157429 #24	ENSGT00950000183167.b ##23	ENSGT00940000159880 #22	ENSGT00940000158858 #21	ENSGT00390000008738.s #19	ENSGT00940000162861 #17	ENSGT00940000164256	ENSGT00940000153203.B #15	ENSGT00940000157061.a.j #14	ENSGT00940000156736 #10
Blue-lipped sea krait	MODERN SPECIES	2757																FGFR3 (ENSLLTG00000002445) #22
Acanthophiinae	ANCESTRAL SPECIES	93	ENSGT00730000111333	ENSGT00940000159008	ENSGT00940000158057	ENSGT00390000014056	ENSGT01000000218120	ENSGT00940000158274	ENSGT00500000044923	ENSGT00950000182937.A.a	ENSGT00390000015682	ENSGT00940000160120 #30	ENSGT00950000182932.B #27	ENSGT00390000013043 #26	ENSGT00390000005342 #25	ENSGT00940000157429 #24	ENSGT00950000183167.b ##23	ENSGT00940000159880 #22	ENSGT00900000142191	ENSGT00390000008738.s #19	ENSGT00940000162861 #17	ENSGT00940000164256	ENSGT00940000153203.B #15	ENSGT00940000157061.a.j #14	ENSGT00940000156736 #10
Eastern brown snake	MODERN SPECIES	138	VSTM4 (ENSPTXG00000018008)	ENSPTXG00000018005	ERCC6 (ENSPTXG00000017998)	CXCL12 (ENSPTXG00000017995)	ENSPTXG00000017994	PAOX (ENSPTXG00000017982)	MTG1 (ENSPTXG00000017965)	CHUK (ENSPTXG00000017961)	COG3 (ENSPTXG00000017932)	MXD4 (ENSPTXG00000017927) #30	NAT8L (ENSPTXG00000017926) #27	C4orf48 (ENSPTXG00000017925) #26	NELFA (ENSPTXG00000017922) #25	NSD2 (ENSPTXG00000017893) #24	ENSPTXG00000017891 ##23	FGFR3 (ENSPTXG00000011013) #22	ENSPTXG00000010968	SLBP (ENSPTXG00000010967) #19	NKX1-1 (ENSPTXG00000010966) #17	ENSPTXG00000010965	MAEA (ENSPTXG00000010964) #15	CTBP1 (ENSPTXG00000010963) #14
Mainland tiger snake	MODERN SPECIES	643																FGFR3 (ENSNSUG00000008294) #22	ENSNSUG00000008289	SLBP (ENSNSUG00000008288) #19
Anura	ANCESTRAL SPECIES	2	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736 #10	ENSGT00740000115581.f #11	ENSGT00940000160999 #12	ENSGT00940000159900 #13	ENSGT00940000157061.a #14	ENSGT00940000153203.B #15	ENSGT00940000164256	ENSGT00940000162861 #17	ENSGT00530000063371.A #18	ENSGT00390000008738 #19	ENSGT00390000013284 #20	ENSGT00940000158858 #21	ENSGT00940000159880 #22	ENSGT00950000183167.b ##23	ENSGT00940000157429 #24	ENSGT00390000005342 #25	ENSGT00390000013043 #26	ENSGT00950000182932.B #27	ENSGT00940000159015 #28	ENSGT00390000011904 #29	ENSGT00940000157217 #31	ENSGT00500000045231 #32	ENSGT00390000010318	ENSGT00390000000973.a.b #33	ENSGT00510000046908.a.b #34	ENSGT00390000002216 #35	ENSGT00940000158581 #36	ENSGT00830000128422
Frog	MODERN SPECIES		ENSXETG00000039689	fgfrl1 (ENSXETG00000021042) #10	ENSXETG00000042708	RNF212 (ENSXETG00000041996) #11	gp25l (ENSXETG00000032430) #12	spon2 (ENSXETG00000021044) #13	ctbp1 (ENSXETG00000021047) #14	maea (ENSXETG00000010676) #15	ENSXETG00000043260	uvssa (ENSXETG00000010677)	nkx1-1 (ENSXETG00000003881) #17	fam53a (ENSXETG00000003878) #18	slbp (ENSXETG00000003876) #19	tmem129 (ENSXETG00000003875) #20	tacc3 (ENSXETG00000003874) #21	fgfr3 (ENSXETG00000002396) #22	letm1 (ENSXETG00000032769) ##23	nsd2 (ENSXETG00000026376) #24	nelfa (ENSXETG00000002392) #25	c4orf48 (ENSXETG00000046848) #26	XB5729271 [provisional] (ENSXETG00000026378)	C4orf48 (ENSXETG00000046317) #26	poln (ENSXETG00000002388) #28	ENSXETG00000047057	nat8l (ENSXETG00000002389) #27	ENSXETG00000044442 #29	mxd4 (ENSXETG00000047414) #30	ENSXETG00000047339	ENSXETG00000047512	zfyve28 (ENSXETG00000020484) #31	ENSXETG00000044048
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000003749	RNF212 (ENSLLEG00000003740) #11	ENSLLEG00000003735 #12	SPON2 (ENSLLEG00000003729) #13	CTBP1 (ENSLLEG00000003680) #14	MAEA (ENSLLEG00000003566) #15	ENSLLEG00000003532	ENSLLEG00000003528	ENSLLEG00000003505	NKX1-1 (ENSLLEG00000003496) #17	ENSLLEG00000003490	FAM53A (ENSLLEG00000003474) #18	ENSLLEG00000003454 #19	TMEM129 (ENSLLEG00000003431) #20	TACC3 (ENSLLEG00000003394) #21	FGFR3 (ENSLLEG00000003130) #22	ENSLLEG00000003019 ##23	ENSLLEG00000002999	NSD2 (ENSLLEG00000002834) #24	NELFA (ENSLLEG00000002756) #25	ENSLLEG00000002737 #26	C4orf48 (ENSLLEG00000002725) #26	NAT8L (ENSLLEG00000002715) #27	POLN (ENSLLEG00000002648) #28	HAUS3 (ENSLLEG00000002622) #29	ENSLLEG00000002583	ENSLLEG00000002562	ZFYVE28 (ENSLLEG00000002472) #31	CFAP99 (ENSLLEG00000002429) #32	ENSLLEG00000002418	RNF4 (ENSLLEG00000002390)