Euteleostomi ANCESTRAL SPECIES ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000009871 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00730000111999 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00950000182810.B.b ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b Sarcopterygii ANCESTRAL SPECIES 146 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000009871 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 Tetrapoda ANCESTRAL SPECIES 3 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00390000011904 ENSGT00940000159015 #28 ENSGT00910000148102 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Amniota ANCESTRAL SPECIES 2 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mammalia ANCESTRAL SPECIES 1 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Theria ANCESTRAL SPECIES 6 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00510000047107.B ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Glires ANCESTRAL SPECIES 8 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Rodentia ANCESTRAL SPECIES 13 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Myomorpha ANCESTRAL SPECIES 19 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Muroidea ANCESTRAL SPECIES 17 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000171945 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000154110.a #8 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000154110.a #8 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Prairie vole MODERN SPECIES 89 Eif4enif1 (ENSMOCG00000020588) #7 Sfi1 (ENSMOCG00000014552) #8 Pisd (ENSMOCG00000017891) #9 ENSMOCG00000003569 #10 Depdc5 (ENSMOCG00000013118) #11 Ywhah (ENSMOCG00000015489) #12 Spon2 (ENSMOCG00000009741) #13 Ctbp1 (ENSMOCG00000015873) #14 Maea (ENSMOCG00000014476) #15 Uvssa (ENSMOCG00000021608) #16 Nkx1-1 (ENSMOCG00000000592) #17 Fam53a (ENSMOCG00000009866) #18 Slbp (ENSMOCG00000015826) #19 Tmem129 (ENSMOCG00000020389) #20 Tacc3 (ENSMOCG00000008214) #21 Fgfr3 (ENSMOCG00000013655) #22 Letm1 (ENSMOCG00000012830) #23 Nsd2 (ENSMOCG00000008250) #24 Nelfa (ENSMOCG00000000669) #25 Gm1673 (ENSMOCG00000020620) #26 Nat8l (ENSMOCG00000017447) #27 Poln (ENSMOCG00000009309) #28 Pcdh20 (ENSMOCG00000008392) #29 Tdrd3 (ENSMOCG00000012962) #30 Diaph3 (ENSMOCG00000012431) #31 ENSMOCG00000011873 #32 Pcdh17 (ENSMOCG00000004856) #33 ENSMOCG00000019804 #34 Olfm4 (ENSMOCG00000016963) #35 Pcdh8 (ENSMOCG00000020531) #36 Cnmd (ENSMOCG00000001113) #37 Northern American deer mouse MODERN SPECIES 1 Pisd (ENSPEMG00000009121) #9 ENSPEMG00000011362 #10 Depdc5 (ENSPEMG00000017938) #11 ENSPEMG00000024597 #12 Slc5a1 (ENSPEMG00000018099) ENSPEMG00000030935 Spon2 (ENSPEMG00000012059) #13 Ctbp1 (ENSPEMG00000018643) #14 Maea (ENSPEMG00000009131) #15 Uvssa (ENSPEMG00000010756) #16 Nkx1-1 (ENSPEMG00000016893) #17 Fam53a (ENSPEMG00000008959) #18 Slbp (ENSPEMG00000018369) #19 Tmem129 (ENSPEMG00000000690) #20 Tacc3 (ENSPEMG00000012388) #21 Fgfr3 (ENSPEMG00000006894) #22 Letm1 (ENSPEMG00000000609) #23 Nsd2 (ENSPEMG00000017277) #24 Nelfa (ENSPEMG00000016134) #25 Gm1673 (ENSPEMG00000017743) #26 ENSPEMG00000026053 #27 Poln (ENSPEMG00000008981) #28 Mxd4 (ENSPEMG00000015018) Zfyve28 (ENSPEMG00000003088) Cfap99 (ENSPEMG00000000404) Rnf4 (ENSPEMG00000017150) Fam193a (ENSPEMG00000000297) Tnip2 (ENSPEMG00000013340) Sh3bp2 (ENSPEMG00000015767) Add1 (ENSPEMG00000008717) ENSPEMG00000011931 Cricetinae ANCESTRAL SPECIES 9 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000170970 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Chinese hamster chok1gshd MODERN SPECIES 44 Pisd (ENSCGRG00001024345) #9 Prr14l (ENSCGRG00001016693) #10 Depdc5 (ENSCGRG00001024582) #11 Ywhah (ENSCGRG00001020682) #12 Slc5a1 (ENSCGRG00001023507) Spon2 (ENSCGRG00001018510) #13 Ctbp1 (ENSCGRG00001000660) #14 ENSCGRG00001024773 Maea (ENSCGRG00001001581) #15 Uvssa (ENSCGRG00001002995) #16 Nkx1-1 (ENSCGRG00001013497) #17 Fam53a (ENSCGRG00001022457) #18 ENSCGRG00001009760 #19 Tmem129 (ENSCGRG00001014269) #20 Tacc3 (ENSCGRG00001022858) #21 Fgfr3 (ENSCGRG00001014679) #22 Letm1 (ENSCGRG00001022378) #23 ENSCGRG00001022523 Nsd2 (ENSCGRG00001008668) #24 Nelfa (ENSCGRG00001018745) #25 Gm1673 (ENSCGRG00001020043) #26 Nat8l (ENSCGRG00001023978) #27 Poln (ENSCGRG00001007876) #28 Haus3 (ENSCGRG00001006121) Mxd4 (ENSCGRG00001011783) Zfyve28 (ENSCGRG00001015693) Cfap99 (ENSCGRG00001018964) Rnf4 (ENSCGRG00001022472) Fam193a (ENSCGRG00001011437) Tnip2 (ENSCGRG00001018278) Sh3bp2 (ENSCGRG00001023205) Golden Hamster MODERN SPECIES 632 Drg1 (ENSMAUG00000018239) Eif4enif1 (ENSMAUG00000002370) #7 Sfi1 (ENSMAUG00000007963) #8 ENSMAUG00000002955 #10 Depdc5 (ENSMAUG00000003792) #11 Slc5a1 (ENSMAUG00000014523) Spon2 (ENSMAUG00000009554) #13 Ctbp1 (ENSMAUG00000018160) #14 ENSMAUG00000011117 Uvssa (ENSMAUG00000017816) #16 Nkx1-1 (ENSMAUG00000013123) #17 Fam53a (ENSMAUG00000018409) #18 Slbp (ENSMAUG00000009490) #19 Tmem129 (ENSMAUG00000013066) #20 Tacc3 (ENSMAUG00000008651) #21 Fgfr3 (ENSMAUG00000012735) #22 Letm1 (ENSMAUG00000007831) #23 Nsd2 (ENSMAUG00000015700) #24 Nelfa (ENSMAUG00000022097) #25 Gm1673 (ENSMAUG00000019500) #26 ENSMAUG00000020607 #27 Poln (ENSMAUG00000008534) #28 Haus3 (ENSMAUG00000000818) Mxd4 (ENSMAUG00000014477) ENSMAUG00000016411 Cfap99 (ENSMAUG00000018621) Rnf4 (ENSMAUG00000022006) Fam193a (ENSMAUG00000013458) Tnip2 (ENSMAUG00000000863) Sh3bp2 (ENSMAUG00000014154) Add1 (ENSMAUG00000010417) Murinae ANCESTRAL SPECIES 12 ENSGT00940000171945 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mus ANCESTRAL SPECIES 14 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00860000135700 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mus_A ANCESTRAL SPECIES 6 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00860000135700 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mus_B ANCESTRAL SPECIES 4 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00860000135700 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mouse MODERN SPECIES 14 Yes1 (ENSMUSG00000014932) Pisd (ENSMUSG00000023452) #9 Prr14l (ENSMUSG00000054280) #10 Depdc5 (ENSMUSG00000037426) #11 Ywhah (ENSMUSG00000018965) #12 Slc5a1 (ENSMUSG00000011034) Spon2 (ENSMUSG00000037379) #13 Ctbp1 (ENSMUSG00000037373) #14 Maea (ENSMUSG00000079562) #15 Uvssa (ENSMUSG00000037355) #16 Nkx1-1 (ENSMUSG00000029112) #17 Fam53a (ENSMUSG00000037339) #18 Slbp (ENSMUSG00000004642) #19 Tmem129 (ENSMUSG00000019295) #20 Tacc3 (ENSMUSG00000037313) #21 Fgfr3 (ENSMUSG00000054252) #22 Letm1 (ENSMUSG00000005299) #23 Nsd2 (ENSMUSG00000057406) #24 Nelfa (ENSMUSG00000029111) #25 Gm1673 (ENSMUSG00000070858) #26 Nat8l (ENSMUSG00000048142) #27 Poln (ENSMUSG00000045102) #28 Haus3 (ENSMUSG00000079555) Mxd4 (ENSMUSG00000037235) Zfyve28 (ENSMUSG00000037224) Cfap99 (ENSMUSG00000109572) Rnf4 (ENSMUSG00000029110) Fam193a (ENSMUSG00000037210) Tnip2 (ENSMUSG00000059866) Sh3bp2 (ENSMUSG00000054520) Add1 (ENSMUSG00000029106) Mus_C ANCESTRAL SPECIES 4 ENSGT00390000013484 #9 ENSGT00520000055626.a #10 ENSGT00390000016559 #11 ENSGT01090000260061.c.a.c.b #12 ENSGT00940000155844 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00860000135700 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Steppe mouse MODERN SPECIES 3132 Depdc5 (ENSMSIG00000019758) #11 Ywhah (ENSMSIG00000020077) #12 Slc5a1 (ENSMSIG00000020102) Spon2 (ENSMSIG00000020130) #13 ENSMSIG00000020152 #14 Maea (ENSMSIG00000020294) #15 Uvssa (ENSMSIG00000020327) #16 Nkx1-1 (ENSMSIG00000020362) #17 Fam53a (ENSMSIG00000020370) #18 ENSMSIG00000020391 Slbp (ENSMSIG00000020394) #19 Tmem129 (ENSMSIG00000020453) #20 ENSMSIG00000020463 #21 Fgfr3 (ENSMSIG00000020478) #22 Letm1 (ENSMSIG00000020902) #23 Nsd2 (ENSMSIG00000020943) #24 Nelfa (ENSMSIG00000021131) #25 ENSMSIG00000021161 #26 Nat8l (ENSMSIG00000021182) #27 Poln (ENSMSIG00000021195) #28 Haus3 (ENSMSIG00000021389) ENSMSIG00000021408 ENSMSIG00000021448 Zfyve28 (ENSMSIG00000021454) Cfap99 (ENSMSIG00000021491) ENSMSIG00000021509 ENSMSIG00000021525 Fam193a (ENSMSIG00000021548) Tnip2 (ENSMSIG00000021599) spretus MODERN SPECIES 14 Pisd (MGP_SPRETEiJ_G0028101) #9 MGP_SPRETEiJ_G0028102 #10 Depdc5 (MGP_SPRETEiJ_G0028103) #11 Ywhah (MGP_SPRETEiJ_G0028104) #12 Slc5a1 (MGP_SPRETEiJ_G0028105) Spon2 (MGP_SPRETEiJ_G0028106) #13 Ctbp1 (MGP_SPRETEiJ_G0028107) #14 Maea (MGP_SPRETEiJ_G0028108) #15 Uvssa (MGP_SPRETEiJ_G0028109) #16 Nkx1-1 (MGP_SPRETEiJ_G0028110) #17 Fam53a (MGP_SPRETEiJ_G0028111) #18 MGP_SPRETEiJ_G0028112 Slbp (MGP_SPRETEiJ_G0028113) #19 Tmem129 (MGP_SPRETEiJ_G0028114) #20 Tacc3 (MGP_SPRETEiJ_G0028115) #21 Fgfr3 (MGP_SPRETEiJ_G0028116) #22 Letm1 (MGP_SPRETEiJ_G0028117) #23 Nsd2 (MGP_SPRETEiJ_G0028118) #24 Nelfa (MGP_SPRETEiJ_G0028119) #25 MGP_SPRETEiJ_G0028120 #26 Nat8l (MGP_SPRETEiJ_G0028121) #27 Poln (MGP_SPRETEiJ_G0028122) #28 Haus3 (MGP_SPRETEiJ_G0028123) Mxd4 (MGP_SPRETEiJ_G0028124) Zfyve28 (MGP_SPRETEiJ_G0028125) Cfap99 (MGP_SPRETEiJ_G0028126) Rnf4 (MGP_SPRETEiJ_G0028127) Fam193a (MGP_SPRETEiJ_G0028128) Tnip2 (MGP_SPRETEiJ_G0028129) Sh3bp2 (MGP_SPRETEiJ_G0028130) Add1 (MGP_SPRETEiJ_G0028131) Ryukyu mouse MODERN SPECIES 14 MGP_CAROLIEiJ_G0027105 Prr14l (MGP_CAROLIEiJ_G0027106) #10 Depdc5 (MGP_CAROLIEiJ_G0027107) #11 MGP_CAROLIEiJ_G0027108 #12 Slc5a1 (MGP_CAROLIEiJ_G0027109) Spon2 (MGP_CAROLIEiJ_G0027110) #13 Ctbp1 (MGP_CAROLIEiJ_G0027111) #14 Maea (MGP_CAROLIEiJ_G0027112) #15 Uvssa (MGP_CAROLIEiJ_G0027113) #16 Nkx1-1 (MGP_CAROLIEiJ_G0027114) #17 Fam53a (MGP_CAROLIEiJ_G0027115) #18 MGP_CAROLIEiJ_G0027116 Slbp (MGP_CAROLIEiJ_G0027117) #19 Tmem129 (MGP_CAROLIEiJ_G0027118) #20 Tacc3 (MGP_CAROLIEiJ_G0027119) #21 Fgfr3 (MGP_CAROLIEiJ_G0027120) #22 Letm1 (MGP_CAROLIEiJ_G0027121) #23 Nsd2 (MGP_CAROLIEiJ_G0027122) #24 Nelfa (MGP_CAROLIEiJ_G0027123) #25 MGP_CAROLIEiJ_G0027124 #26 Nat8l (MGP_CAROLIEiJ_G0027125) #27 Poln (MGP_CAROLIEiJ_G0027126) #28 Haus3 (MGP_CAROLIEiJ_G0027127) Mxd4 (MGP_CAROLIEiJ_G0027128) Zfyve28 (MGP_CAROLIEiJ_G0027129) Cfap99 (MGP_CAROLIEiJ_G0027130) Rnf4 (MGP_CAROLIEiJ_G0027131) Fam193a (MGP_CAROLIEiJ_G0027132) Tnip2 (MGP_CAROLIEiJ_G0027133) Sh3bp2 (MGP_CAROLIEiJ_G0027134) Add1 (MGP_CAROLIEiJ_G0027135) Shrew mouse MODERN SPECIES 4 Pisd (MGP_PahariEiJ_G0016889) #9 Prr14l (MGP_PahariEiJ_G0016890) #10 Depdc5 (MGP_PahariEiJ_G0016891) #11 Ywhah (MGP_PahariEiJ_G0016892) #12 Slc5a1 (MGP_PahariEiJ_G0016893) Spon2 (MGP_PahariEiJ_G0016894) #13 Ctbp1 (MGP_PahariEiJ_G0016895) #14 Maea (MGP_PahariEiJ_G0016896) #15 Uvssa (MGP_PahariEiJ_G0016897) #16 Nkx1-1 (MGP_PahariEiJ_G0016898) #17 Fam53a (MGP_PahariEiJ_G0016899) #18 MGP_PahariEiJ_G0016900 Slbp (MGP_PahariEiJ_G0016901) #19 Tmem129 (MGP_PahariEiJ_G0016902) #20 MGP_PahariEiJ_G0016903 #21 Fgfr3 (MGP_PahariEiJ_G0016904) #22 MGP_PahariEiJ_G0016905 Nsd2 (MGP_PahariEiJ_G0016906) #24 Nelfa (MGP_PahariEiJ_G0016907) #25 MGP_PahariEiJ_G0016908 #26 Nat8l (MGP_PahariEiJ_G0016909) #27 Poln (MGP_PahariEiJ_G0016910) #28 Haus3 (MGP_PahariEiJ_G0016911) Mxd4 (MGP_PahariEiJ_G0016912) Zfyve28 (MGP_PahariEiJ_G0016913) Cfap99 (MGP_PahariEiJ_G0016914) MGP_PahariEiJ_G0016915 Fam193a (MGP_PahariEiJ_G0016916) Tnip2 (MGP_PahariEiJ_G0016917) Sh3bp2 (MGP_PahariEiJ_G0016918) Add1 (MGP_PahariEiJ_G0016919) Rat MODERN SPECIES 5 Pisd (ENSRNOG00000018319) #9 Prr14l (ENSRNOG00000048891) #10 LOC100361879 (ENSRNOG00000045749) Depdc5 (ENSRNOG00000018144) #11 Ywhah (ENSRNOG00000055471) #12 Slc5a1 (ENSRNOG00000017775) Spon2 (ENSRNOG00000006033) #13 Ctbp1 (ENSRNOG00000005428) #14 Maea (ENSRNOG00000005397) #15 Uvssa (ENSRNOG00000005122) #16 Nkx1-1 (ENSRNOG00000005113) #17 Fam53a (ENSRNOG00000017548) #18 Slbp (ENSRNOG00000037162) #19 Tmem129 (ENSRNOG00000017329) #20 Tacc3 (ENSRNOG00000017259) #21 Fgfr3 (ENSRNOG00000016818) #22 Letm1 (ENSRNOG00000016427) #23 Nsd2 (ENSRNOG00000038140) #24 Nelfa (ENSRNOG00000015474) #25 RGD1560394 (ENSRNOG00000065022) #26 Nat8l (ENSRNOG00000049351) #27 Poln (ENSRNOG00000069005) #28 Mxd4 (ENSRNOG00000015033) Zfyve28 (ENSRNOG00000014874) Cfap99 (ENSRNOG00000058434) Rnf4 (ENSRNOG00000013930) Fam193a (ENSRNOG00000013832) Tnip2 (ENSRNOG00000013805) Sh3bp2 (ENSRNOG00000013747) Add1 (ENSRNOG00000013039) Mfsd10 (ENSRNOG00000012534) Upper Galilee mountains blind mole rat MODERN SPECIES 1177 Dgkq (ENSNGAG00000022655) Idua (ENSNGAG00000023311) Slc26a1 (ENSNGAG00000019448) ENSNGAG00000019399 Rnf212 (ENSNGAG00000019964) Tmed11 (ENSNGAG00000003592) Spon2 (ENSNGAG00000007051) #13 Ctbp1 (ENSNGAG00000010894) #14 Maea (ENSNGAG00000002281) #15 Uvssa (ENSNGAG00000012000) #16 Nkx1-1 (ENSNGAG00000013945) #17 ENSNGAG00000015315 Slbp (ENSNGAG00000020799) #19 Tmem129 (ENSNGAG00000017856) #20 Tacc3 (ENSNGAG00000017862) #21 Fgfr3 (ENSNGAG00000015713) #22 Letm1 (ENSNGAG00000000720) #23 Nsd2 (ENSNGAG00000010171) #24 Nelfa (ENSNGAG00000023963) #25 ENSNGAG00000014727 Gm1673 (ENSNGAG00000023348) #26 ENSNGAG00000002900 #27 Poln (ENSNGAG00000022997) #28 Haus3 (ENSNGAG00000014413) Mxd4 (ENSNGAG00000016526) ENSNGAG00000014521 Cfap99 (ENSNGAG00000020586) Rnf4 (ENSNGAG00000018375) Fam193a (ENSNGAG00000021458) Tnip2 (ENSNGAG00000020375) Sh3bp2 (ENSNGAG00000018119) Lesser Egyptian jerboa MODERN SPECIES 58 Idua (ENSJJAG00000010185) Fgfrl1 (ENSJJAG00000012607) ENSJJAG00000022256 Rnf212 (ENSJJAG00000023907) Tmed11 (ENSJJAG00000021956) Spon2 (ENSJJAG00000010729) #13 Ctbp1 (ENSJJAG00000022277) #14 Maea (ENSJJAG00000018909) #15 Uvssa (ENSJJAG00000000552) #16 Nkx1-1 (ENSJJAG00000017578) #17 ENSJJAG00000022694 ENSJJAG00000019010 ENSJJAG00000020549 #19 ENSJJAG00000015175 #20 Tacc3 (ENSJJAG00000015964) #21 Fgfr3 (ENSJJAG00000001873) #22 Letm1 (ENSJJAG00000024090) #23 Nsd2 (ENSJJAG00000012992) #24 Nelfa (ENSJJAG00000024237) #25 Gm1673 (ENSJJAG00000006076) #26 Nat8l (ENSJJAG00000024226) #27 Poln (ENSJJAG00000012540) #28 Haus3 (ENSJJAG00000013628) ENSJJAG00000017036 ENSJJAG00000000555 Cfap99 (ENSJJAG00000019360) ENSJJAG00000014107 ENSJJAG00000000617 Fam193a (ENSJJAG00000013646) Tnip2 (ENSJJAG00000021336) Sh3bp2 (ENSJJAG00000022545) Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 390 Idua (ENSDORG00000004020) Slc26a1 (ENSDORG00000024823) Fgfrl1 (ENSDORG00000016596) ENSDORG00000024007 Tmed11 (ENSDORG00000013022) Spon2 (ENSDORG00000025165) #13 ENSDORG00000024801 #14 Maea (ENSDORG00000007382) #15 Uvssa (ENSDORG00000001679) #16 ENSDORG00000025230 Fam53a (ENSDORG00000005663) #18 Slbp (ENSDORG00000003028) #19 ENSDORG00000003030 #20 ENSDORG00000026325 ENSDORG00000009704 #22 ENSDORG00000025862 #22 Letm1 (ENSDORG00000009706) #23 Nsd2 (ENSDORG00000013095) #24 Nelfa (ENSDORG00000013103) #25 Gm1673 (ENSDORG00000009221) #26 ENSDORG00000012646 #27 Poln (ENSDORG00000012647) #28 Haus3 (ENSDORG00000012649) Mxd4 (ENSDORG00000000173) ENSDORG00000026396 Cfap99 (ENSDORG00000025036) Rnf4 (ENSDORG00000006675) Fam193a (ENSDORG00000016576) ENSDORG00000016577 Sh3bp2 (ENSDORG00000010509) Htt (ENSDORG00000003272) Kangaroo rat MODERN SPECIES 390 Dgkq (ENSDORG00000008460) Idua (ENSDORG00000004020) Slc26a1 (ENSDORG00000024823) Fgfrl1 (ENSDORG00000016596) ENSDORG00000024007 Tmed11 (ENSDORG00000013022) Spon2 (ENSDORG00000025165) #13 ENSDORG00000024801 #14 Maea (ENSDORG00000007382) #15 Uvssa (ENSDORG00000001679) #16 ENSDORG00000025230 Fam53a (ENSDORG00000005663) #18 Slbp (ENSDORG00000003028) #19 ENSDORG00000003030 #20 ENSDORG00000026325 ENSDORG00000009704 #22 ENSDORG00000025862 #22 Letm1 (ENSDORG00000009706) #23 Nsd2 (ENSDORG00000013095) #24 Nelfa (ENSDORG00000013103) #25 Gm1673 (ENSDORG00000009221) #26 ENSDORG00000012646 #27 Poln (ENSDORG00000012647) #28 Haus3 (ENSDORG00000012649) Mxd4 (ENSDORG00000000173) ENSDORG00000026396 Cfap99 (ENSDORG00000025036) Rnf4 (ENSDORG00000006675) Fam193a (ENSDORG00000016576) ENSDORG00000016577 Sh3bp2 (ENSDORG00000010509) Rodentia_A ANCESTRAL SPECIES 20 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Sciuridae ANCESTRAL SPECIES 19 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Marmotini ANCESTRAL SPECIES 26 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.o ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Marmotini_b ANCESTRAL SPECIES 33 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.o ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Arctic ground squirrel MODERN SPECIES 759 FAM53A (ENSUPAG00010002811) #18 ENSUPAG00010002700 #19 TACC3 (ENSUPAG00010002681) #21 FGFR3 (ENSUPAG00010002175) #22 ENSUPAG00010002097 #23 NSD2 (ENSUPAG00010001901) #24 NELFA (ENSUPAG00010001867) #25 C4orf48 (ENSUPAG00010001846) #26 NAT8L (ENSUPAG00010001835) #27 Squirrel MODERN SPECIES 77 DGKQ (ENSSTOG00000014572) SLC26A1 (ENSSTOG00000029038) IDUA (ENSSTOG00000006937) FGFRL1 (ENSSTOG00000022392) ENSSTOG00000031016 ENSSTOG00000028967 SPON2 (ENSSTOG00000025443) #13 CTBP1 (ENSSTOG00000005891) #14 MAEA (ENSSTOG00000005706) #15 UVSSA (ENSSTOG00000005729) #16 ENSSTOG00000031320 #17 FAM53A (ENSSTOG00000023406) #18 SLBP (ENSSTOG00000003262) #19 TMEM129 (ENSSTOG00000020817) #20 TACC3 (ENSSTOG00000012665) #21 FGFR3 (ENSSTOG00000000815) #22 LETM1 (ENSSTOG00000014167) #23 NSD2 (ENSSTOG00000003369) #24 NELFA (ENSSTOG00000003421) #25 ENSSTOG00000024159 #27 POLN (ENSSTOG00000001059) #28 HAUS3 (ENSSTOG00000020375) MXD4 (ENSSTOG00000028770) ZFYVE28 (ENSSTOG00000012220) CFAP99 (ENSSTOG00000032892) ENSSTOG00000011101 FAM193A (ENSSTOG00000007426) TNIP2 (ENSSTOG00000007444) SH3BP2 (ENSSTOG00000028939) ADD1 (ENSSTOG00000009726) ENSSTOG00000025349 Alpin marmot MODERN SPECIES 9 GAK (ENSMMMG00000008679) ENSMMMG00000008701 TMEM175 (ENSMMMG00000008703) SLC26A1 (ENSMMMG00000008883) IDUA (ENSMMMG00000008893) ENSMMMG00000009027 ENSMMMG00000009060 SPON2 (ENSMMMG00000009081) #13 CTBP1 (ENSMMMG00000009094) #14 MAEA (ENSMMMG00000009131) #15 UVSSA (ENSMMMG00000009148) #16 FAM53A (ENSMMMG00000009208) #18 SLBP (ENSMMMG00000009227) #19 TMEM129 (ENSMMMG00000009228) #20 TACC3 (ENSMMMG00000009234) #21 FGFR3 (ENSMMMG00000009271) #22 ENSMMMG00000010030 #23 NSD2 (ENSMMMG00000010052) #24 NELFA (ENSMMMG00000010244) #25 ENSMMMG00000010260 #27 POLN (ENSMMMG00000010281) #28 HAUS3 (ENSMMMG00000010462) MXD4 (ENSMMMG00000010466) ZFYVE28 (ENSMMMG00000010480) CFAP99 (ENSMMMG00000010512) RNF4 (ENSMMMG00000010533) FAM193A (ENSMMMG00000010560) TNIP2 (ENSMMMG00000010616) SH3BP2 (ENSMMMG00000010638) ADD1 (ENSMMMG00000010678) ENSMMMG00000012548 Eurasian red squirrel MODERN SPECIES 18 TMEM175 (ENSSVLG00005012860) SLC26A1 (ENSSVLG00005012770) IDUA (ENSSVLG00005012525) FGFRL1 (ENSSVLG00005012435) ENSSVLG00005012104 SPON2 (ENSSVLG00005012045) #13 CTBP1 (ENSSVLG00005011900) #14 ENSSVLG00005011867 MAEA (ENSSVLG00005011623) #15 UVSSA (ENSSVLG00005011273) #16 NKX1-1 (ENSSVLG00005011200) #17 FAM53A (ENSSVLG00005011171) #18 SLBP (ENSSVLG00005010930) #19 TMEM129 (ENSSVLG00005010840) #20 TACC3 (ENSSVLG00005010736) #21 FGFR3 (ENSSVLG00005018602) #22 ENSSVLG00005018420 #23 NSD2 (ENSSVLG00005018333) #24 NELFA (ENSSVLG00005018189) #25 C4orf48 (ENSSVLG00005018142) #26 NAT8L (ENSSVLG00005018097) #27 ENSSVLG00005018048 ENSSVLG00005018005 POLN (ENSSVLG00005017739) #28 HAUS3 (ENSSVLG00005017655) MXD4 (ENSSVLG00005017609) ENSSVLG00005017576 ENSSVLG00005017470 CFAP99 (ENSSVLG00005017288) RNF4 (ENSSVLG00005017190) FAM193A (ENSSVLG00005016851) Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043.f #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00940000164052 ENSGT00510000046908.a.b ENSGT00390000002216 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000045507 ODAM (ENSHGLG00000001598) ENSHGLG00000038103 ENSHGLG00000028349 SULT1E1 (ENSHGLG00000000404) ENSHGLG00000000269 ENSHGLG00000003092 ENSHGLG00000002184 ENSHGLG00000047874 ENSHGLG00000002082 ENSHGLG00000001108 ENSHGLG00000006663 #18 ENSHGLG00000005955 #19 TMEM129 (ENSHGLG00000046034) #20 ENSHGLG00000004881 #21 FGFR3 (ENSHGLG00000004816) #22 LETM1 (ENSHGLG00000004719) #23 ENSHGLG00000044127 NELFA (ENSHGLG00000004622) #25 ENSHGLG00000020481 ENSHGLG00000010063 #26 POLN (ENSHGLG00000009000) #28 HAUS3 (ENSHGLG00000051007) ENSHGLG00000047915 RNF4 (ENSHGLG00000046605) ENSHGLG00000006269 ENSHGLG00000037168 TNIP2 (ENSHGLG00000005230) SH3BP2 (ENSHGLG00000005188) ADD1 (ENSHGLG00000005103) ENSHGLG00000005051 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043.f #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00940000164052 ENSGT00390000002216 ENSGT00940000158581 Guinea pig MODERN SPECIES 24 FAM53A (ENSCPOG00000033116) #18 SLBP (ENSCPOG00000000031) #19 TMEM129 (ENSCPOG00000000032) #20 TACC3 (ENSCPOG00000023531) #21 FGFR3 (ENSCPOG00000025595) #22 LETM1 (ENSCPOG00000011337) #23 NSD2 (ENSCPOG00000007513) #24 NELFA (ENSCPOG00000019715) #25 C4orf48 (ENSCPOG00000031206) #26 ENSCPOG00000038761 #27 POLN (ENSCPOG00000001665) #28 HAUS3 (ENSCPOG00000021994) MXD4 (ENSCPOG00000022492) ZFYVE28 (ENSCPOG00000027392) CFAP99 (ENSCPOG00000040209) RNF4 (ENSCPOG00000030545) FAM193A (ENSCPOG00000004013) ENSCPOG00000024404 SH3BP2 (ENSCPOG00000009421) ENSCPOG00000031940 Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043.f #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00940000164052 ENSGT00390000002216 ENSGT00940000158581 Long-tailed chinchilla MODERN SPECIES 221 DGKQ (ENSCLAG00000011985) SLC26A1 (ENSCLAG00000006725) IDUA (ENSCLAG00000011871) FGFRL1 (ENSCLAG00000007552) ENSCLAG00000008587 ENSCLAG00000010654 SPON2 (ENSCLAG00000006806) #13 CTBP1 (ENSCLAG00000008653) #14 MAEA (ENSCLAG00000013403) #15 UVSSA (ENSCLAG00000008812) #16 ENSCLAG00000007213 #17 FAM53A (ENSCLAG00000007294) #18 SLBP (ENSCLAG00000008157) #19 TMEM129 (ENSCLAG00000010127) #20 TACC3 (ENSCLAG00000011683) #21 FGFR3 (ENSCLAG00000006986) #22 LETM1 (ENSCLAG00000010785) #23 NSD2 (ENSCLAG00000014450) #24 NELFA (ENSCLAG00000012299) #25 C4orf48 (ENSCLAG00000009344) #26 ENSCLAG00000009488 #27 POLN (ENSCLAG00000010355) #28 HAUS3 (ENSCLAG00000010866) MXD4 (ENSCLAG00000011445) ZFYVE28 (ENSCLAG00000009540) CFAP99 (ENSCLAG00000012930) RNF4 (ENSCLAG00000014072) FAM193A (ENSCLAG00000014296) ENSCLAG00000006931 SH3BP2 (ENSCLAG00000008009) ADD1 (ENSCLAG00000011442) Degu MODERN SPECIES 47 DGKQ (ENSODEG00000012712) SLC26A1 (ENSODEG00000015117) IDUA (ENSODEG00000012062) FGFRL1 (ENSODEG00000011612) ENSODEG00000012265 ENSODEG00000012726 SPON2 (ENSODEG00000012066) #13 ENSODEG00000013011 #14 MAEA (ENSODEG00000012556) #15 UVSSA (ENSODEG00000011757) #16 FAM53A (ENSODEG00000011180) #18 ENSODEG00000012272 SLBP (ENSODEG00000012641) #19 ENSODEG00000011155 #20 ENSODEG00000012973 #21 ENSODEG00000012582 #22 LETM1 (ENSODEG00000012866) #23 NSD2 (ENSODEG00000012080) #24 NELFA (ENSODEG00000011122) #25 C4orf48 (ENSODEG00000011093) #26 ENSODEG00000011723 #27 ENSODEG00000011259 POLN (ENSODEG00000011265) #28 HAUS3 (ENSODEG00000011986) MXD4 (ENSODEG00000011512) ENSODEG00000011568 CFAP99 (ENSODEG00000011882) RNF4 (ENSODEG00000011133) ENSODEG00000010562 FAM193A (ENSODEG00000010949) ENSODEG00000010959 Lagomorpha ANCESTRAL SPECIES ENSGT00940000159880 #22 Pika MODERN SPECIES 9336 FGFR3 (ENSOPRG00000002205) #22 Tree shrew MODERN SPECIES 3160 SLBP (ENSTBEG00000004085) #19 TMEM129 (ENSTBEG00000004388) #20 ENSTBEG00000004759 #22 LETM1 (ENSTBEG00000006309) #23 Primates ANCESTRAL SPECIES 10 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Strepsirrhini ANCESTRAL SPECIES 40 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Lemuriformes ANCESTRAL SPECIES 44 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Lemuriformes_a ANCESTRAL SPECIES 115 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000158146 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Greater bamboo lemur MODERN SPECIES 1156 FGFR3 (ENSPSMG00000023299) #22 ENSPSMG00000023435 #23 Coquerels sifaka MODERN SPECIES 974 FGFR3 (ENSPCOG00000026602) #22 LETM1 (ENSPCOG00000023114) #23 ENSPCOG00000022691 NSD2 (ENSPCOG00000020060) #24 NELFA (ENSPCOG00000015588) #25 C4orf48 (ENSPCOG00000022022) #26 NAT8L (ENSPCOG00000020575) #27 POLN (ENSPCOG00000028057) #28 HAUS3 (ENSPCOG00000019768) MXD4 (ENSPCOG00000018116) ZFYVE28 (ENSPCOG00000018385) CFAP99 (ENSPCOG00000015631) Mouse lemur MODERN SPECIES 9 IDUA (ENSMICG00000012938) FGFRL1 (ENSMICG00000030053) RNF212 (ENSMICG00000047687) ENSMICG00000033680 ENSMICG00000036701 SPON2 (ENSMICG00000002454) #13 CTBP1 (ENSMICG00000012941) #14 MAEA (ENSMICG00000012953) #15 UVSSA (ENSMICG00000012963) #16 ENSMICG00000044932 NKX1-1 (ENSMICG00000042887) #17 FAM53A (ENSMICG00000044027) #18 SLBP (ENSMICG00000014244) #19 TMEM129 (ENSMICG00000014263) #20 ENSMICG00000033578 FGFR3 (ENSMICG00000008153) #22 LETM1 (ENSMICG00000008169) #23 NSD2 (ENSMICG00000011335) #24 NELFA (ENSMICG00000011366) #25 C4orf48 (ENSMICG00000046656) #26 NAT8L (ENSMICG00000045400) #27 POLN (ENSMICG00000047538) #28 HAUS3 (ENSMICG00000028831) MXD4 (ENSMICG00000047939) ZFYVE28 (ENSMICG00000031619) CFAP99 (ENSMICG00000036187) RNF4 (ENSMICG00000041515) FAM193A (ENSMICG00000008863) TNIP2 (ENSMICG00000008835) SH3BP2 (ENSMICG00000002298) ENSMICG00000030984 Bushbaby MODERN SPECIES 313 TMEM175 (ENSOGAG00000015589) DGKQ (ENSOGAG00000015595) IDUA (ENSOGAG00000015603) SLC26A1 (ENSOGAG00000015601) FGFRL1 (ENSOGAG00000015610) ENSOGAG00000030464 SPON2 (ENSOGAG00000006366) #13 CTBP1 (ENSOGAG00000006367) #14 MAEA (ENSOGAG00000006370) #15 UVSSA (ENSOGAG00000006373) #16 NKX1-1 (ENSOGAG00000034822) #17 ENSOGAG00000014882 SLBP (ENSOGAG00000009750) #19 TMEM129 (ENSOGAG00000014873) #20 TACC3 (ENSOGAG00000014875) #21 FGFR3 (ENSOGAG00000025157) #22 ENSOGAG00000014883 #23 NSD2 (ENSOGAG00000014890) #24 NELFA (ENSOGAG00000029627) #25 C4orf48 (ENSOGAG00000031277) #26 NAT8L (ENSOGAG00000026595) #27 POLN (ENSOGAG00000011299) #28 HAUS3 (ENSOGAG00000032569) MXD4 (ENSOGAG00000011305) ZFYVE28 (ENSOGAG00000011309) RNF4 (ENSOGAG00000010776) FAM193A (ENSOGAG00000012386) TNIP2 (ENSOGAG00000012391) SH3BP2 (ENSOGAG00000008463) ADD1 (ENSOGAG00000011061) MFSD10 (ENSOGAG00000011069) Haplorrhini ANCESTRAL SPECIES 23 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Tarsier MODERN SPECIES 1478 FGFR3 (ENSTSYG00000032651) #22 LETM1 (ENSTSYG00000006649) #23 Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342.j #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.w ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mas night monkey MODERN SPECIES 1118 MSANTD1 (ENSANAG00000037096) HTT (ENSANAG00000031258) ENSANAG00000035544 NOP14 (ENSANAG00000022601) ENSANAG00000026094 ADD1 (ENSANAG00000019463) SH3BP2 (ENSANAG00000033091) CTBP1 (ENSANAG00000027809) #14 MAEA (ENSANAG00000036521) #15 UVSSA (ENSANAG00000020676) #16 NKX1-1 (ENSANAG00000034667) #17 FAM53A (ENSANAG00000022971) #18 SLBP (ENSANAG00000034769) #19 TMEM129 (ENSANAG00000036729) #20 TACC3 (ENSANAG00000028183) #21 FGFR3 (ENSANAG00000026958) #22 LETM1 (ENSANAG00000037304) #23 NSD2 (ENSANAG00000035180) #24 NELFA (ENSANAG00000027096) #25 C4orf48 (ENSANAG00000032965) #26 NAT8L (ENSANAG00000026210) #27 POLN (ENSANAG00000025375) #28 HAUS3 (ENSANAG00000029444) MXD4 (ENSANAG00000026969) ENSANAG00000026828 ENSANAG00000037948 CFAP99 (ENSANAG00000029171) RNF4 (ENSANAG00000034781) FAM193A (ENSANAG00000032586) TNIP2 (ENSANAG00000033040) Cebidae ANCESTRAL SPECIES 4 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342.j #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.w ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Marmoset MODERN SPECIES 15 TMEM175 (ENSCJAG00000001891) DGKQ (ENSCJAG00000001866) SLC26A1 (ENSCJAG00000001864) IDUA (ENSCJAG00000001838) FGFRL1 (ENSCJAG00000001812) ENSCJAG00000082677 ENSCJAG00000012473 SPON2 (ENSCJAG00000048623) #13 ENSCJAG00000001565 #14 MAEA (ENSCJAG00000078979) #15 UVSSA (ENSCJAG00000041289) #16 NKX1-1 (ENSCJAG00000079323) #17 FAM53A (ENSCJAG00000001781) #18 SLBP (ENSCJAG00000001790) #19 TACC3 (ENSCJAG00000001805) #21 FGFR3 (ENSCJAG00000001819) #22 ENSCJAG00000059838 LETM1 (ENSCJAG00000001859) #23 NSD2 (ENSCJAG00000001876) #24 NELFA (ENSCJAG00000039975) #25 C4orf48 (ENSCJAG00000044010) #26 NAT8L (ENSCJAG00000014504) #27 HAUS3 (ENSCJAG00000036903) MXD4 (ENSCJAG00000066421) ZFYVE28 (ENSCJAG00000038192) CFAP99 (ENSCJAG00000038947) RNF4 (ENSCJAG00000014371) ENSCJAG00000057846 FAM193A (ENSCJAG00000014343) TNIP2 (ENSCJAG00000014338) SH3BP2 (ENSCJAG00000014306) Cebidae_a ANCESTRAL SPECIES 34 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342.j #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.x ENSGT00390000010318.w ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Bolivian squirrel monkey MODERN SPECIES 108 TMEM175 (ENSSBOG00000023050) DGKQ (ENSSBOG00000028901) SLC26A1 (ENSSBOG00000030545) IDUA (ENSSBOG00000024010) FGFRL1 (ENSSBOG00000030072) ENSSBOG00000026401 ENSSBOG00000018159 SPON2 (ENSSBOG00000031498) #13 CTBP1 (ENSSBOG00000009891) #14 MAEA (ENSSBOG00000030338) #15 ENSSBOG00000029534 #16 FAM53A (ENSSBOG00000034926) #18 SLBP (ENSSBOG00000033897) #19 TMEM129 (ENSSBOG00000035214) #20 TACC3 (ENSSBOG00000022484) #21 FGFR3 (ENSSBOG00000028613) #22 LETM1 (ENSSBOG00000027558) #23 NSD2 (ENSSBOG00000020624) #24 NELFA (ENSSBOG00000024481) #25 ENSSBOG00000021831 #27 POLN (ENSSBOG00000029730) #28 HAUS3 (ENSSBOG00000035151) MXD4 (ENSSBOG00000020590) ZFYVE28 (ENSSBOG00000024678) CFAP99 (ENSSBOG00000026143) ENSSBOG00000010070 RNF4 (ENSSBOG00000031127) FAM193A (ENSSBOG00000035392) ENSSBOG00000028277 SH3BP2 (ENSSBOG00000004638) ADD1 (ENSSBOG00000032628) Capuchin MODERN SPECIES 117 DGKQ (ENSCCAG00000030615) SLC26A1 (ENSCCAG00000026035) IDUA (ENSCCAG00000007900) FGFRL1 (ENSCCAG00000032864) RNF212 (ENSCCAG00000037676) ENSCCAG00000025209 SPON2 (ENSCCAG00000032899) #13 CTBP1 (ENSCCAG00000037066) #14 ENSCCAG00000022660 #15 UVSSA (ENSCCAG00000032486) #16 NKX1-1 (ENSCCAG00000034329) #17 FAM53A (ENSCCAG00000005420) #18 SLBP (ENSCCAG00000026134) #19 TMEM129 (ENSCCAG00000021775) #20 TACC3 (ENSCCAG00000037097) #21 FGFR3 (ENSCCAG00000029787) #22 LETM1 (ENSCCAG00000022623) #23 NSD2 (ENSCCAG00000036562) #24 NELFA (ENSCCAG00000025280) #25 C4orf48 (ENSCCAG00000016052) #26 NAT8L (ENSCCAG00000033445) #27 POLN (ENSCCAG00000026095) #28 HAUS3 (ENSCCAG00000037575) MXD4 (ENSCCAG00000026915) ZFYVE28 (ENSCCAG00000019800) ADRA2C (ENSCCAG00000033349) ENSCCAG00000035547 HMX1 (ENSCCAG00000029215) ENSCCAG00000031132 CPZ (ENSCCAG00000037917) GPR78 (ENSCCAG00000023119) Catarrhini ANCESTRAL SPECIES 14 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b Hominoidea ANCESTRAL SPECIES 10 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00910000148485 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.i #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.u ENSGT00390000000973.a.b ENSGT00510000046908.a.b Gibbon MODERN SPECIES 12 SLC26A1 (ENSNLEG00000000982) IDUA (ENSNLEG00000000973) ENSNLEG00000000991 ENSNLEG00000000998 ENSNLEG00000035394 SPON2 (ENSNLEG00000001006) #13 CTBP1 (ENSNLEG00000001055) #14 MAEA (ENSNLEG00000001060) #15 UVSSA (ENSNLEG00000001082) #16 ENSNLEG00000001097 FAM53A (ENSNLEG00000000044) #18 SLBP (ENSNLEG00000000048) #19 ENSNLEG00000034209 #20 ENSNLEG00000035802 TACC3 (ENSNLEG00000000057) #21 ENSNLEG00000000063 #22 LETM1 (ENSNLEG00000000067) #23 NSD2 (ENSNLEG00000000081) #24 ENSNLEG00000000120 #25 ENSNLEG00000030858 #26 ENSNLEG00000035664 #27 ENSNLEG00000000145 POLN (ENSNLEG00000000132) #28 ENSNLEG00000036277 ENSNLEG00000000149 ZFYVE28 (ENSNLEG00000000151) ENSNLEG00000000154 ENSNLEG00000034085 ENSNLEG00000031900 FAM193A (ENSNLEG00000000167) ENSNLEG00000000191 Hominidae ANCESTRAL SPECIES 12 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00910000148485 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.i #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.u ENSGT00390000000973.a.b ENSGT00510000046908.a.b Orangutan MODERN SPECIES 17 IDUA (ENSPPYG00000014514) SLC26A1 (ENSPPYG00000014515) FGFRL1 (ENSPPYG00000040964) ENSPPYG00000014517 ENSPPYG00000014518 SPON2 (ENSPPYG00000014522) #13 CTBP1 (ENSPPYG00000014524) #14 ENSPPYG00000038782 MAEA (ENSPPYG00000014525) #15 UVSSA (ENSPPYG00000014526) #16 NKX1-1 (ENSPPYG00000041138) #17 FAM53A (ENSPPYG00000014528) #18 ENSPPYG00000014529 #19 TMEM129 (ENSPPYG00000014530) #20 TACC3 (ENSPPYG00000014531) #21 FGFR3 (ENSPPYG00000014532) #22 LETM1 (ENSPPYG00000014533) #23 NSD2 (ENSPPYG00000014534) #24 NELFA (ENSPPYG00000014535) #25 ENSPPYG00000014536 #26 NAT8L (ENSPPYG00000014537) #27 POLN (ENSPPYG00000014538) #28 ENSPPYG00000040447 ENSPPYG00000014539 ENSPPYG00000036280 ENSPPYG00000037498 ZFYVE28 (ENSPPYG00000014542) CFAP99 (ENSPPYG00000040137) RNF4 (ENSPPYG00000025865) FAM193A (ENSPPYG00000014544) TNIP2 (ENSPPYG00000014545) Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00910000148485 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.i #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.u ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Gorilla MODERN SPECIES 17 DGKQ (ENSGGOG00000010295) SLC26A1 (ENSGGOG00000010333) IDUA (ENSGGOG00000010322) FGFRL1 (ENSGGOG00000010340) RNF212 (ENSGGOG00000023243) ENSGGOG00000007686 SPON2 (ENSGGOG00000002707) #13 CTBP1 (ENSGGOG00000010541) #14 ENSGGOG00000036321 MAEA (ENSGGOG00000004866) #15 UVSSA (ENSGGOG00000004872) #16 FAM53A (ENSGGOG00000003163) #18 SLBP (ENSGGOG00000003167) #19 TMEM129 (ENSGGOG00000039598) #20 TACC3 (ENSGGOG00000041158) #21 FGFR3 (ENSGGOG00000015081) #22 LETM1 (ENSGGOG00000002923) #23 NSD2 (ENSGGOG00000014144) #24 NELFA (ENSGGOG00000014161) #25 ENSGGOG00000041239 #26 ENSGGOG00000037682 #27 POLN (ENSGGOG00000006832) #28 ENSGGOG00000015700 HAUS3 (ENSGGOG00000000744) MXD4 (ENSGGOG00000000747) ZFYVE28 (ENSGGOG00000000748) CFAP99 (ENSGGOG00000041964) RNF4 (ENSGGOG00000036446) ENSGGOG00000025865 SH3BP2 (ENSGGOG00000014162) ADD1 (ENSGGOG00000007407) Homo/Pan group ANCESTRAL SPECIES 10 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00910000148485 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.i #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.u ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Human MODERN SPECIES 16 TMEM175 (ENSG00000127419) DGKQ (ENSG00000145214) SLC26A1 (ENSG00000145217) IDUA (ENSG00000127415) FGFRL1 (ENSG00000127418) RNF212 (ENSG00000178222) SPON2 (ENSG00000159674) #13 CTBP1 (ENSG00000159692) #14 MAEA (ENSG00000090316) #15 UVSSA (ENSG00000163945) #16 NKX1-1 (ENSG00000235608) #17 FAM53A (ENSG00000174137) #18 SLBP (ENSG00000163950) #19 TACC3 (ENSG00000013810) #21 TMEM129 (ENSG00000168936) #20 FGFR3 (ENSG00000068078) #22 LETM1 (ENSG00000168924) #23 NSD2 (ENSG00000109685) #24 NELFA (ENSG00000185049) #25 C4orf48 (ENSG00000243449) #26 NAT8L (ENSG00000185818) #27 POLN (ENSG00000130997) #28 HAUS3 (ENSG00000214367) MXD4 (ENSG00000123933) ZFYVE28 (ENSG00000159733) CFAP99 (ENSG00000206113) RNF4 (ENSG00000063978) FAM193A (ENSG00000125386) TNIP2 (ENSG00000168884) SH3BP2 (ENSG00000087266) ADD1 (ENSG00000087274) Pan ANCESTRAL SPECIES 7 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00910000148485 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.i #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.u ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Bonobo MODERN SPECIES 17 SLC26A1 (ENSPPAG00000034145) IDUA (ENSPPAG00000032304) FGFRL1 (ENSPPAG00000033720) RNF212 (ENSPPAG00000043537) ENSPPAG00000033770 SPON2 (ENSPPAG00000038791) #13 CTBP1 (ENSPPAG00000032870) #14 ENSPPAG00000016070 ENSPPAG00000017524 #15 UVSSA (ENSPPAG00000039158) #16 FAM53A (ENSPPAG00000001687) #18 SLBP (ENSPPAG00000033300) #19 TMEM129 (ENSPPAG00000032640) #20 TACC3 (ENSPPAG00000041213) #21 ENSPPAG00000039682 FGFR3 (ENSPPAG00000034154) #22 LETM1 (ENSPPAG00000022259) #23 NSD2 (ENSPPAG00000028888) #24 NELFA (ENSPPAG00000039571) #25 ENSPPAG00000040365 #26 ENSPPAG00000033617 #27 POLN (ENSPPAG00000042877) #28 ENSPPAG00000026673 HAUS3 (ENSPPAG00000032988) ENSPPAG00000042591 ZFYVE28 (ENSPPAG00000013584) CFAP99 (ENSPPAG00000035753) RNF4 (ENSPPAG00000035112) FAM193A (ENSPPAG00000039176) ENSPPAG00000035246 SH3BP2 (ENSPPAG00000036464) Chimpanzee MODERN SPECIES 17 SLC26A1 (ENSPTRG00000015818) IDUA (ENSPTRG00000015819) FGFRL1 (ENSPTRG00000049998) RNF212 (ENSPTRG00000015822) ENSPTRG00000045674 SPON2 (ENSPTRG00000015825) #13 CTBP1 (ENSPTRG00000015827) #14 ENSPTRG00000049092 MAEA (ENSPTRG00000015829) #15 UVSSA (ENSPTRG00000015830) #16 NKX1-1 (ENSPTRG00000041220) #17 FAM53A (ENSPTRG00000015831) #18 SLBP (ENSPTRG00000015832) #19 TMEM129 (ENSPTRG00000015833) #20 TACC3 (ENSPTRG00000015834) #21 FGFR3 (ENSPTRG00000015836) #22 LETM1 (ENSPTRG00000015837) #23 NSD2 (ENSPTRG00000015838) #24 NELFA (ENSPTRG00000015840) #25 C4H4orf48 (ENSPTRG00000031284) #26 NAT8L (ENSPTRG00000047587) #27 POLN (ENSPTRG00000034296) #28 ENSPTRG00000052565 HAUS3 (ENSPTRG00000015843) MXD4 (ENSPTRG00000015844) ZFYVE28 (ENSPTRG00000015845) CFAP99 (ENSPTRG00000039939) RNF4 (ENSPTRG00000046370) FAM193A (ENSPTRG00000015847) TNIP2 (ENSPTRG00000015848) SH3BP2 (ENSPTRG00000046864) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00910000147922 ENSGT00940000153203.B #15 ENSGT00910000146990 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b Rhinopithecus ANCESTRAL SPECIES 135 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT01080000257748.b ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b Golden snub-nosed monkey MODERN SPECIES 2481 FAM53A (ENSRROG00000028469) #18 SLBP (ENSRROG00000030081) #19 TMEM129 (ENSRROG00000041532) #20 TACC3 (ENSRROG00000039140) #21 FGFR3 (ENSRROG00000042585) #22 LETM1 (ENSRROG00000038867) #23 NSD2 (ENSRROG00000033896) #24 NELFA (ENSRROG00000040024) #25 ENSRROG00000017138 C4orf48 (ENSRROG00000029831) #26 ENSRROG00000020413 #27 POLN (ENSRROG00000045711) #28 ENSRROG00000031302 HAUS3 (ENSRROG00000033454) MXD4 (ENSRROG00000040089) ZFYVE28 (ENSRROG00000026858) CFAP99 (ENSRROG00000041025) RNF4 (ENSRROG00000038892) FAM193A (ENSRROG00000033008) TNIP2 (ENSRROG00000045312) Black snub-nosed monkey MODERN SPECIES 539 FAM53A (ENSRBIG00000036916) #18 SLBP (ENSRBIG00000039159) #19 TMEM129 (ENSRBIG00000015368) #20 TACC3 (ENSRBIG00000042233) #21 FGFR3 (ENSRBIG00000040633) #22 LETM1 (ENSRBIG00000038284) #23 NSD2 (ENSRBIG00000043171) #24 NELFA (ENSRBIG00000031633) #25 ENSRBIG00000037817 C4orf48 (ENSRBIG00000037248) #26 ENSRBIG00000044373 #27 POLN (ENSRBIG00000007947) #28 ENSRBIG00000041367 HAUS3 (ENSRBIG00000037222) MXD4 (ENSRBIG00000043500) ZFYVE28 (ENSRBIG00000020333) CFAP99 (ENSRBIG00000035346) RNF4 (ENSRBIG00000027423) CDCP1 (ENSRBIG00000030951) CLEC3B (ENSRBIG00000039337) Cercopithecinae ANCESTRAL SPECIES 14 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00910000146990 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b Vervet Monkey MODERN SPECIES 19 DGKQ (ENSCSAG00000015416) SLC26A1 (ENSCSAG00000015468) IDUA (ENSCSAG00000015497) FGFRL1 (ENSCSAG00000015508) RNF212 (ENSCSAG00000015539) ENSCSAG00000015572 SPON2 (ENSCSAG00000015578) #13 CTBP1 (ENSCSAG00000015583) #14 MAEA (ENSCSAG00000015589) #15 UVSSA (ENSCSAG00000015594) #16 NKX1-1 (ENSCSAG00000015596) #17 FAM53A (ENSCSAG00000015598) #18 SLBP (ENSCSAG00000015628) #19 TMEM129 (ENSCSAG00000015634) #20 TACC3 (ENSCSAG00000015639) #21 FGFR3 (ENSCSAG00000015647) #22 LETM1 (ENSCSAG00000015656) #23 NSD2 (ENSCSAG00000015664) #24 NELFA (ENSCSAG00000015669) #25 C4orf48 (ENSCSAG00000015674) #26 NAT8L (ENSCSAG00000015681) #27 POLN (ENSCSAG00000015716) #28 HAUS3 (ENSCSAG00000015734) MXD4 (ENSCSAG00000015741) ZFYVE28 (ENSCSAG00000015744) CFAP99 (ENSCSAG00000015752) FAM193A (ENSCSAG00000015766) TNIP2 (ENSCSAG00000015771) SH3BP2 (ENSCSAG00000015782) ADD1 (ENSCSAG00000015789) MFSD10 (ENSCSAG00000015797) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00910000146990 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.h.h.a ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00910000146990 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.h.h.a ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b Olive baboon MODERN SPECIES 13 GAK (ENSPANG00000011910) TMEM175 (ENSPANG00000020176) ENSPANG00000016992 IDUA (ENSPANG00000007828) FGFRL1 (ENSPANG00000040655) RNF212 (ENSPANG00000011989) SPON2 (ENSPANG00000013162) #13 CTBP1 (ENSPANG00000005494) #14 MAEA (ENSPANG00000024432) #15 UVSSA (ENSPANG00000019190) #16 NKX1-1 (ENSPANG00000035702) #17 FAM53A (ENSPANG00000020344) #18 SLBP (ENSPANG00000004932) #19 TMEM129 (ENSPANG00000005178) #20 TACC3 (ENSPANG00000007581) #21 FGFR3 (ENSPANG00000024533) #22 LETM1 (ENSPANG00000024554) #23 NSD2 (ENSPANG00000022789) #24 NELFA (ENSPANG00000019016) #25 ENSPANG00000029835 C4orf48 (ENSPANG00000006016) #26 POLN (ENSPANG00000000640) #28 HAUS3 (ENSPANG00000007327) ENSPANG00000049266 MXD4 (ENSPANG00000024535) ZFYVE28 (ENSPANG00000001128) CFAP99 (ENSPANG00000034047) RNF4 (ENSPANG00000013408) FAM193A (ENSPANG00000006875) TNIP2 (ENSPANG00000019351) SH3BP2 (ENSPANG00000021586) Cercopithecinae_d ANCESTRAL SPECIES 85 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00960000188067 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00910000146990 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Drill MODERN SPECIES 1719 DGKQ (ENSMLEG00000021202) SLC26A1 (ENSMLEG00000037428) IDUA (ENSMLEG00000040558) FGFRL1 (ENSMLEG00000037900) ENSMLEG00000028284 ENSMLEG00000032227 SPON2 (ENSMLEG00000002232) #13 CTBP1 (ENSMLEG00000030520) #14 MAEA (ENSMLEG00000039505) #15 ENSMLEG00000038826 UVSSA (ENSMLEG00000007158) #16 FAM53A (ENSMLEG00000035332) #18 SLBP (ENSMLEG00000024639) #19 TMEM129 (ENSMLEG00000040279) #20 TACC3 (ENSMLEG00000010263) #21 FGFR3 (ENSMLEG00000030618) #22 ENSMLEG00000040964 #23 NSD2 (ENSMLEG00000037492) #24 NELFA (ENSMLEG00000031010) #25 C4orf48 (ENSMLEG00000032446) #26 ENSMLEG00000041510 #27 ENSMLEG00000032508 POLN (ENSMLEG00000038809) #28 HAUS3 (ENSMLEG00000035756) MXD4 (ENSMLEG00000021543) ZFYVE28 (ENSMLEG00000026808) CFAP99 (ENSMLEG00000042081) RNF4 (ENSMLEG00000038069) ENSMLEG00000011279 FAM193A (ENSMLEG00000042643) TNIP2 (ENSMLEG00000034847) Sooty mangabey MODERN SPECIES 649 IDUA (ENSCATG00000009650) FGFRL1 (ENSCATG00000036121) ENSCATG00000035612 ENSCATG00000044938 ENSCATG00000031977 SPON2 (ENSCATG00000036451) #13 CTBP1 (ENSCATG00000035745) #14 MAEA (ENSCATG00000019101) #15 ENSCATG00000041571 UVSSA (ENSCATG00000010984) #16 NKX1-1 (ENSCATG00000042002) #17 FAM53A (ENSCATG00000044777) #18 SLBP (ENSCATG00000029173) #19 TMEM129 (ENSCATG00000029726) #20 TACC3 (ENSCATG00000029112) #21 FGFR3 (ENSCATG00000033697) #22 ENSCATG00000042406 #23 NSD2 (ENSCATG00000013442) #24 NELFA (ENSCATG00000036998) #25 C4orf48 (ENSCATG00000036109) #26 NAT8L (ENSCATG00000039077) #27 ENSCATG00000036129 POLN (ENSCATG00000038015) #28 HAUS3 (ENSCATG00000038591) MXD4 (ENSCATG00000037468) ZFYVE28 (ENSCATG00000043569) CFAP99 (ENSCATG00000015552) RNF4 (ENSCATG00000035992) FAM193A (ENSCATG00000042635) ENSCATG00000012185 SH3BP2 (ENSCATG00000032838) Macaca ANCESTRAL SPECIES 25 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00910000146990 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.h.h.a ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00650000094590 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00910000146990 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a.g #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000000703.h.h.a ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Crab-eating macaque MODERN SPECIES 15 DGKQ (ENSMFAG00000001042) IDUA (ENSMFAG00000032030) ENSMFAG00000039496 ENSMFAG00000002925 RNF212 (ENSMFAG00000002719) SPON2 (ENSMFAG00000050124) #13 CTBP1 (ENSMFAG00000000176) #14 MAEA (ENSMFAG00000001193) #15 UVSSA (ENSMFAG00000045124) #16 ENSMFAG00000030632 NKX1-1 (ENSMFAG00000002277) #17 FAM53A (ENSMFAG00000052796) #18 SLBP (ENSMFAG00000030130) #19 TMEM129 (ENSMFAG00000000493) #20 TACC3 (ENSMFAG00000043154) #21 FGFR3 (ENSMFAG00000032292) #22 LETM1 (ENSMFAG00000039886) #23 NSD2 (ENSMFAG00000031384) #24 NELFA (ENSMFAG00000035742) #25 ENSMFAG00000038719 C4orf48 (ENSMFAG00000001046) #26 ENSMFAG00000059887 #27 POLN (ENSMFAG00000032512) #28 ENSMFAG00000062209 HAUS3 (ENSMFAG00000034116) ENSMFAG00000053887 ZFYVE28 (ENSMFAG00000062429) CFAP99 (ENSMFAG00000034253) RNF4 (ENSMFAG00000050616) FAM193A (ENSMFAG00000045259) TNIP2 (ENSMFAG00000003617) Rhesus MODERN SPECIES 15 TMEM175 (ENSMMUG00000017221) DGKQ (ENSMMUG00000017222) IDUA (ENSMMUG00000057764) SLC26A1 (ENSMMUG00000017223) FGFRL1 (ENSMMUG00000032300) RNF212 (ENSMMUG00000015507) SPON2 (ENSMMUG00000020856) #13 CTBP1 (ENSMMUG00000008323) #14 MAEA (ENSMMUG00000008357) #15 UVSSA (ENSMMUG00000038497) #16 NKX1-1 (ENSMMUG00000051731) #17 FAM53A (ENSMMUG00000008363) #18 SLBP (ENSMMUG00000032303) #19 TMEM129 (ENSMMUG00000064450) #20 TACC3 (ENSMMUG00000011191) #21 FGFR3 (ENSMMUG00000019945) #22 LETM1 (ENSMMUG00000019948) #23 NSD2 (ENSMMUG00000046942) #24 NELFA (ENSMMUG00000009944) #25 ENSMMUG00000003234 CKQ732225.1H4orf48 (ENSMMUG00000032304) #26 POLN (ENSMMUG00000001156) #28 ENSMMUG00000055448 MXD4 (ENSMMUG00000048558) ZFYVE28 (ENSMMUG00000032306) CFAP99 (ENSMMUG00000040759) RNF4 (ENSMMUG00000007948) FAM193A (ENSMMUG00000013158) TNIP2 (ENSMMUG00000007966) SH3BP2 (ENSMMUG00000014335) ADD1 (ENSMMUG00000008379) Pig-tailed macaque MODERN SPECIES 590 SLC26A1 (ENSMNEG00000037199) IDUA (ENSMNEG00000036273) FGFRL1 (ENSMNEG00000028620) ENSMNEG00000036883 ENSMNEG00000042968 SPON2 (ENSMNEG00000034158) #13 CTBP1 (ENSMNEG00000037787) #14 MAEA (ENSMNEG00000028551) #15 UVSSA (ENSMNEG00000034877) #16 ENSMNEG00000027696 NKX1-1 (ENSMNEG00000036214) #17 FAM53A (ENSMNEG00000036030) #18 SLBP (ENSMNEG00000008082) #19 TMEM129 (ENSMNEG00000038437) #20 TACC3 (ENSMNEG00000041051) #21 FGFR3 (ENSMNEG00000043249) #22 ENSMNEG00000038507 #23 NSD2 (ENSMNEG00000030530) #24 NELFA (ENSMNEG00000029249) #25 ENSMNEG00000040986 C4orf48 (ENSMNEG00000044160) #26 NAT8L (ENSMNEG00000029002) #27 POLN (ENSMNEG00000044077) #28 ENSMNEG00000034392 HAUS3 (ENSMNEG00000031199) MXD4 (ENSMNEG00000036831) ZFYVE28 (ENSMNEG00000039840) CFAP99 (ENSMNEG00000030381) RNF4 (ENSMNEG00000035146) FAM193A (ENSMNEG00000045102) TNIP2 (ENSMNEG00000045051) Laurasiatheria ANCESTRAL SPECIES 11 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000165250 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Eulipotyphla ANCESTRAL SPECIES 1869 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 Common shrew MODERN SPECIES 4355 ENSSARG00000002941 #22 LETM1 (ENSSARG00000002990) #23 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Suina ANCESTRAL SPECIES 33 ENSGT00940000159492 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 969 ENSCWAG00000020968 #22 ENSCWAG00000020975 #22 LETM1 (ENSCWAG00000020987) #23 NSD2 (ENSCWAG00000021027) #24 NELFA (ENSCWAG00000021130) #25 Chacoan peccary MODERN SPECIES 969 ENSCWAG00000020968 #22 ENSCWAG00000020975 #22 LETM1 (ENSCWAG00000020987) #23 NSD2 (ENSCWAG00000021027) #24 NELFA (ENSCWAG00000021130) #25 Pig MODERN SPECIES 16 DGKQ (ENSSSCG00000027286) IDUA (ENSSSCG00000032262) SLC26A1 (ENSSSCG00000035739) FGFRL1 (ENSSSCG00000036512) ENSSSCG00000045703 ENSSSCG00000032808 SPON2 (ENSSSCG00000039488) #13 CTBP1 (ENSSSCG00000031302) #14 MAEA (ENSSSCG00000032304) #15 UVSSA (ENSSSCG00000037035) #16 NKX1-1 (ENSSSCG00000038573) #17 FAM53A (ENSSSCG00000032633) #18 SLBP (ENSSSCG00000055957) #19 TMEM129 (ENSSSCG00000008678) #20 ENSSSCG00000008677 #21 FGFR3 (ENSSSCG00000030827) #22 LETM1 (ENSSSCG00000008675) #23 NSD2 (ENSSSCG00000008682) #24 NELFA (ENSSSCG00000008681) #25 C4orf48 (ENSSSCG00000063120) #26 NAT8L (ENSSSCG00000033541) #27 POLN (ENSSSCG00000027718) #28 MXD4 (ENSSSCG00000008687) ZFYVE28 (ENSSSCG00000008689) CFAP99 (ENSSSCG00000034633) ENSSSCG00000054601 RNF4 (ENSSSCG00000008690) FAM193A (ENSSSCG00000029745) TNIP2 (ENSSSCG00000008691) SH3BP2 (ENSSSCG00000022004) ADD1 (ENSSSCG00000008692) Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Artiodactyla_b ANCESTRAL SPECIES 30 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Cetacea ANCESTRAL SPECIES 12 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Blue whale MODERN SPECIES 16 TMEM175 (ENSBMSG00010010458) DGKQ (ENSBMSG00010010384) SLC26A1 (ENSBMSG00010010350) IDUA (ENSBMSG00010010336) FGFRL1 (ENSBMSG00010010322) ENSBMSG00010010309 CTBP1 (ENSBMSG00010010280) #14 MAEA (ENSBMSG00010010210) #15 UVSSA (ENSBMSG00010010170) #16 NKX1-1 (ENSBMSG00010010159) #17 FAM53A (ENSBMSG00010010143) #18 SLBP (ENSBMSG00010010021) #19 TMEM129 (ENSBMSG00010009983) #20 ENSBMSG00010009968 ENSBMSG00010009945 #21 FGFR3 (ENSBMSG00010009892) #22 LETM1 (ENSBMSG00010009849) #23 ENSBMSG00010009841 ENSBMSG00010009831 #24 ENSBMSG00010009815 #24 NELFA (ENSBMSG00010009791) #25 C4orf48 (ENSBMSG00010009769) #26 NAT8L (ENSBMSG00010009755) #27 POLN (ENSBMSG00010009707) #28 HAUS3 (ENSBMSG00010009672) MXD4 (ENSBMSG00010009650) ENSBMSG00010009628 CFAP99 (ENSBMSG00010009605) RNF4 (ENSBMSG00010009582) FAM193A (ENSBMSG00010009552) TNIP2 (ENSBMSG00010009509) Odontoceti ANCESTRAL SPECIES 11 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000154158.k.b ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00550000074784.a.b ENSGT01030000234916 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b Sperm whale MODERN SPECIES 18 CPLX1 (ENSPCTG00005007813) PCGF3 (ENSPCTG00005007779) ENSPCTG00005007664 FGFRL1 (ENSPCTG00005007637) ENSPCTG00005007620 SPON2 (ENSPCTG00005007593) #13 CTBP1 (ENSPCTG00005007566) #14 ENSPCTG00005007552 MAEA (ENSPCTG00005007348) #15 UVSSA (ENSPCTG00005007289) #16 NKX1-1 (ENSPCTG00005007269) #17 FAM53A (ENSPCTG00005007252) #18 SLBP (ENSPCTG00005007183) #19 TMEM129 (ENSPCTG00005007122) #20 TACC3 (ENSPCTG00005007081) #21 FGFR3 (ENSPCTG00005006670) #22 LETM1 (ENSPCTG00005006566) #23 ENSPCTG00005006543 ENSPCTG00005006514 NSD2 (ENSPCTG00005006400) #24 NELFA (ENSPCTG00005006320) #25 ENSPCTG00005006283 #26 NAT8L (ENSPCTG00005006259) #27 ENSPCTG00005006248 POLN (ENSPCTG00005006144) #28 HAUS3 (ENSPCTG00005006113) ENSPCTG00005019696 MXD4 (ENSPCTG00005019644) ENSPCTG00005019596 ENSPCTG00005019514 CFAP99 (ENSPCTG00005019388) Odontoceti_a ANCESTRAL SPECIES 22 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000154158.k.b ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.r #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00550000074784.a.b ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Dolphin MODERN SPECIES 2008 ENSTTRG00000010877 #18 ENSTTRG00000010901 #19 TMEM129 (ENSTTRG00000010917) #20 TACC3 (ENSTTRG00000010930) #21 ENSTTRG00000010941 #22 LETM1 (ENSTTRG00000010947) #23 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000154158.k.b ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.r #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00550000074784.a.b ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Monodontidae ANCESTRAL SPECIES 9 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000154158.k.b ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.r #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00550000074784.a.b ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Beluga whale MODERN SPECIES 77 DGKQ (ENSDLEG00000016886) SLC26A1 (ENSDLEG00000016873) IDUA (ENSDLEG00000016854) FGFRL1 (ENSDLEG00000016841) ENSDLEG00000016829 SPON2 (ENSDLEG00000016801) #13 CTBP1 (ENSDLEG00000016785) #14 ENSDLEG00000016755 MAEA (ENSDLEG00000016731) #15 UVSSA (ENSDLEG00000016715) #16 NKX1-1 (ENSDLEG00000016706) #17 FAM53A (ENSDLEG00000016696) #18 SLBP (ENSDLEG00000016673) #19 TMEM129 (ENSDLEG00000016657) #20 ENSDLEG00000016641 #21 FGFR3 (ENSDLEG00000016588) #22 LETM1 (ENSDLEG00000016566) #23 ENSDLEG00000016553 NSD2 (ENSDLEG00000016523) #24 NELFA (ENSDLEG00000016475) #25 C4orf48 (ENSDLEG00000016453) #26 NAT8L (ENSDLEG00000016443) #27 POLN (ENSDLEG00000016047) #28 HAUS3 (ENSDLEG00000016006) MXD4 (ENSDLEG00000015987) ENSDLEG00000015973 ENSDLEG00000015957 CFAP99 (ENSDLEG00000015790) RNF4 (ENSDLEG00000015767) FAM193A (ENSDLEG00000015632) TNIP2 (ENSDLEG00000015610) Narwhal MODERN SPECIES 307 DGKQ (ENSMMNG00015009133) SLC26A1 (ENSMMNG00015009113) IDUA (ENSMMNG00015009092) FGFRL1 (ENSMMNG00015009082) ENSMMNG00015009070 SPON2 (ENSMMNG00015009059) #13 CTBP1 (ENSMMNG00015009032) #14 ENSMMNG00015009007 MAEA (ENSMMNG00015008969) #15 UVSSA (ENSMMNG00015008918) #16 NKX1-1 (ENSMMNG00015008894) #17 FAM53A (ENSMMNG00015008881) #18 SLBP (ENSMMNG00015008857) #19 TMEM129 (ENSMMNG00015008823) #20 TACC3 (ENSMMNG00015008798) #21 FGFR3 (ENSMMNG00015008748) #22 LETM1 (ENSMMNG00015008712) #23 ENSMMNG00015008696 NSD2 (ENSMMNG00015008622) #24 NELFA (ENSMMNG00015008560) #25 C4orf48 (ENSMMNG00015008532) #26 ENSMMNG00015008518 #27 POLN (ENSMMNG00015008466) #28 HAUS3 (ENSMMNG00015008433) MXD4 (ENSMMNG00015008416) ENSMMNG00015008390 ENSMMNG00015008379 CFAP99 (ENSMMNG00015008357) RNF4 (ENSMMNG00015008314) FAM193A (ENSMMNG00015008181) TNIP2 (ENSMMNG00015008095) Vaquita MODERN SPECIES 16 TMEM175 (ENSPSNG00000018137) DGKQ (ENSPSNG00000018241) IDUA (ENSPSNG00000018525) SLC26A1 (ENSPSNG00000018577) FGFRL1 (ENSPSNG00000018608) ENSPSNG00000018647 SPON2 (ENSPSNG00000018706) #13 CTBP1 (ENSPSNG00000018755) #14 ENSPSNG00000018860 MAEA (ENSPSNG00000018923) #15 UVSSA (ENSPSNG00000019027) #16 NKX1-1 (ENSPSNG00000019051) #17 FAM53A (ENSPSNG00000019099) #18 SLBP (ENSPSNG00000019131) #19 ENSPSNG00000019238 #20 FGFR3 (ENSPSNG00000019417) #22 LETM1 (ENSPSNG00000019524) #23 ENSPSNG00000019562 NSD2 (ENSPSNG00000019603) #24 NELFA (ENSPSNG00000019706) #25 C4orf48 (ENSPSNG00000019794) #26 NAT8L (ENSPSNG00000019815) #27 POLN (ENSPSNG00000019912) #28 HAUS3 (ENSPSNG00000019961) MXD4 (ENSPSNG00000020007) ENSPSNG00000020034 ENSPSNG00000020080 CFAP99 (ENSPSNG00000020141) RNF4 (ENSPSNG00000020234) FAM193A (ENSPSNG00000020338) TNIP2 (ENSPSNG00000020458) Pecora ANCESTRAL SPECIES 15 ENSGT00940000159527 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 29 GAK (ENSCHYG00000000449) TMEM175 (ENSCHYG00000000372) DGKQ (ENSCHYG00000000312) SLC26A1 (ENSCHYG00000000284) ENSCHYG00000000225 FGFRL1 (ENSCHYG00000000201) ENSCHYG00000000191 SPON2 (ENSCHYG00000026323) #13 ENSCHYG00000026312 CTBP1 (ENSCHYG00000026282) #14 MAEA (ENSCHYG00000026208) #15 UVSSA (ENSCHYG00000026183) #16 SLBP (ENSCHYG00000026159) #19 TMEM129 (ENSCHYG00000026136) #20 ENSCHYG00000026110 #21 ENSCHYG00000026079 #22 LETM1 (ENSCHYG00000026028) #23 ENSCHYG00000025972 #24 NELFA (ENSCHYG00000025867) #25 NAT8L (ENSCHYG00000025851) #27 POLN (ENSCHYG00000025750) #28 HAUS3 (ENSCHYG00000025719) ENSCHYG00000025702 ENSCHYG00000025686 CFAP99 (ENSCHYG00000025667) RNF4 (ENSCHYG00000025555) ENSCHYG00000025523 FAM193A (ENSCHYG00000025484) TNIP2 (ENSCHYG00000025444) SH3BP2 (ENSCHYG00000025298) ENSCHYG00000024729 Yarkand deer MODERN SPECIES 681 ENSCHYG00000021370 #22 Percora_a ANCESTRAL SPECIES 18 ENSGT00940000159527 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Siberian musk deer MODERN SPECIES 354 ENSMMSG00000010313 TMEM175 (ENSMMSG00000010338) DGKQ (ENSMMSG00000010406) IDUA (ENSMMSG00000010506) SLC26A1 (ENSMMSG00000010599) FGFRL1 (ENSMMSG00000010628) ENSMMSG00000010668 SPON2 (ENSMMSG00000010709) #13 CTBP1 (ENSMMSG00000010749) #14 MAEA (ENSMMSG00000010850) #15 UVSSA (ENSMMSG00000011083) #16 NKX1-1 (ENSMMSG00000011124) #17 SLBP (ENSMMSG00000011149) #19 TMEM129 (ENSMMSG00000011303) #20 ENSMMSG00000011328 #21 FGFR3 (ENSMMSG00000011411) #22 LETM1 (ENSMMSG00000011470) #23 NSD2 (ENSMMSG00000011600) #24 NELFA (ENSMMSG00000011766) #25 C4orf48 (ENSMMSG00000011837) #26 NAT8L (ENSMMSG00000011858) #27 POLN (ENSMMSG00000011904) #28 HAUS3 (ENSMMSG00000011973) MXD4 (ENSMMSG00000012003) ENSMMSG00000012038 ENSMMSG00000012065 CFAP99 (ENSMMSG00000012099) RNF4 (ENSMMSG00000015797) FAM193A (ENSMMSG00000015827) TNIP2 (ENSMMSG00000015869) SH3BP2 (ENSMMSG00000015976) Bovidae ANCESTRAL SPECIES 18 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Bovinae ANCESTRAL SPECIES 15 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 American bison MODERN SPECIES 1489 FGFR3 (ENSBBBG00000008640) #22 Bos ANCESTRAL SPECIES 15 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Bos_b ANCESTRAL SPECIES 14 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00390000001735.e.b ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Cow MODERN SPECIES 25 DGKQ (ENSBTAG00000017240) SLC26A1 (ENSBTAG00000007001) IDUA (ENSBTAG00000007002) FGFRL1 (ENSBTAG00000027464) ENSBTAG00000049784 ENSBTAG00000002247 SPON2 (ENSBTAG00000004261) #13 CTBP1 (ENSBTAG00000008480) #14 MAEA (ENSBTAG00000012575) #15 UVSSA (ENSBTAG00000012577) #16 NKX1-1 (ENSBTAG00000048789) #17 ENSBTAG00000048974 SLBP (ENSBTAG00000001328) #19 TMEM129 (ENSBTAG00000011042) #20 TACC3 (ENSBTAG00000011044) #21 FGFR3 (ENSBTAG00000007164) #22 LETM1 (ENSBTAG00000020108) #23 NSD2 (ENSBTAG00000007986) #24 NELFA (ENSBTAG00000017921) #25 C6H4orf48 (ENSBTAG00000031395) #26 ENSBTAG00000053874 #27 POLN (ENSBTAG00000017296) #28 HAUS3 (ENSBTAG00000024787) MXD4 (ENSBTAG00000015209) ZFYVE28 (ENSBTAG00000006683) CFAP99 (ENSBTAG00000054376) RNF4 (ENSBTAG00000027453) FAM193A (ENSBTAG00000009744) TNIP2 (ENSBTAG00000015126) SH3BP2 (ENSBTAG00000013996) ADD1 (ENSBTAG00000021128) Hybrid Bos Indicus MODERN SPECIES 25 TMEM175 (ENSBIXG00005008181) DGKQ (ENSBIXG00005008250) SLC26A1 (ENSBIXG00005006076) IDUA (ENSBIXG00005008330) FGFRL1 (ENSBIXG00005008365) ENSBIXG00005008383 ENSBIXG00005005681 SPON2 (ENSBIXG00005006081) #13 CTBP1 (ENSBIXG00005008435) #14 MAEA (ENSBIXG00005008499) #15 UVSSA (ENSBIXG00005008522) #16 NKX1-1 (ENSBIXG00005008534) #17 ENSBIXG00005008565 #19 TMEM129 (ENSBIXG00005000225) #20 TACC3 (ENSBIXG00005008616) #21 FGFR3 (ENSBIXG00005008663) #22 LETM1 (ENSBIXG00005008685) #23 NSD2 (ENSBIXG00005008768) #24 NELFA (ENSBIXG00005008819) #25 C4orf48 (ENSBIXG00005006404) #26 NAT8L (ENSBIXG00005008838) #27 ENSBIXG00005006191 POLN (ENSBIXG00005000322) #28 ENSBIXG00005008965 MXD4 (ENSBIXG00005008980) ENSBIXG00005009002 ENSBIXG00005009025 CFAP99 (ENSBIXG00005009067) RNF4 (ENSBIXG00005005461) FAM193A (ENSBIXG00005009399) TNIP2 (ENSBIXG00005009483) Bos_a ANCESTRAL SPECIES 61 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00990000210994 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.b ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Domestic yak MODERN SPECIES 25 IDUA (ENSBGRG00000019585) FGFRL1 (ENSBGRG00000019493) ENSBGRG00000019433 ENSBGRG00000019312 ENSBGRG00000019257 ENSBGRG00000019141 #13 ENSBGRG00000018881 #14 MAEA (ENSBGRG00000018651) #15 UVSSA (ENSBGRG00000018583) #16 NKX1-1 (ENSBGRG00000018511) #17 ENSBGRG00000018496 ENSBGRG00000018427 SLBP (ENSBGRG00000018109) #19 TMEM129 (ENSBGRG00000017981) #20 TACC3 (ENSBGRG00000017804) #21 FGFR3 (ENSBGRG00000017575) #22 LETM1 (ENSBGRG00000017241) #23 ENSBGRG00000017205 #24 NELFA (ENSBGRG00000017020) #25 C4orf48 (ENSBGRG00000016955) #26 ENSBGRG00000016908 #27 POLN (ENSBGRG00000016638) #28 ENSBGRG00000016598 #14 HAUS3 (ENSBGRG00000016524) ENSBGRG00000016319 ENSBGRG00000016224 ENSBGRG00000016089 CFAP99 (ENSBGRG00000015852) RNF4 (ENSBGRG00000015725) FAM193A (ENSBGRG00000015247) TNIP2 (ENSBGRG00000015105) Wild yak MODERN SPECIES 798 MAEA (ENSBMUG00000021584) #15 UVSSA (ENSBMUG00000021556) #16 ENSBMUG00000021513 ENSBMUG00000021511 SLBP (ENSBMUG00000021468) #19 TMEM129 (ENSBMUG00000021381) #20 TACC3 (ENSBMUG00000021368) #21 FGFR3 (ENSBMUG00000020745) #22 LETM1 (ENSBMUG00000019981) #23 NSD2 (ENSBMUG00000019910) #24 NELFA (ENSBMUG00000019729) #25 POLN (ENSBMUG00000019557) #28 ENSBMUG00000019531 Caprinae ANCESTRAL SPECIES 13 ENSGT00940000159527 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.a #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.k ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Goat MODERN SPECIES 653 FGFR3 (ENSCHIG00000007253) #22 Rambouillet Sheep MODERN SPECIES 22 ENSOARG00020011415 TMEM175 (ENSOARG00020011312) DGKQ (ENSOARG00020011039) SLC26A1 (ENSOARG00020011004) IDUA (ENSOARG00020010816) FGFRL1 (ENSOARG00020010713) ENSOARG00020010628 SPON2 (ENSOARG00020010589) #13 CTBP1 (ENSOARG00020010402) #14 MAEA (ENSOARG00020009920) #15 UVSSA (ENSOARG00020009863) #16 NKX1-1 (ENSOARG00020009848) #17 SLBP (ENSOARG00020023875) #19 TMEM129 (ENSOARG00020023839) #20 ENSOARG00020023797 #21 FGFR3 (ENSOARG00020023492) #22 LETM1 (ENSOARG00020023387) #23 NSD2 (ENSOARG00020023148) #24 NELFA (ENSOARG00020023088) #25 C4orf48 (ENSOARG00020023033) #26 NAT8L (ENSOARG00020023001) #27 ENSOARG00020022986 POLN (ENSOARG00020022890) #28 HAUS3 (ENSOARG00020022851) MXD4 (ENSOARG00020022801) ENSOARG00020022734 ENSOARG00020022674 CFAP99 (ENSOARG00020022601) RNF4 (ENSOARG00020022503) FAM193A (ENSOARG00020022278) TNIP2 (ENSOARG00020022129) Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217.ac ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Chiroptera ANCESTRAL SPECIES 9 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.f #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217.ac ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Megabat MODERN SPECIES 2087 FGFR3 (ENSPVAG00000007535) #22 LETM1 (ENSPVAG00000007537) #23 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858.f #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217.ac ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Greater horseshoe bat MODERN SPECIES 23 TMEM175 (ENSRFEG00010012470) DGKQ (ENSRFEG00010012388) SLC26A1 (ENSRFEG00010012284) IDUA (ENSRFEG00010012246) FGFRL1 (ENSRFEG00010012188) ENSRFEG00010012091 SPON2 (ENSRFEG00010012048) #13 CTBP1 (ENSRFEG00010011872) #14 MAEA (ENSRFEG00010011546) #15 UVSSA (ENSRFEG00010011482) #16 NKX1-1 (ENSRFEG00010011426) #17 FAM53A (ENSRFEG00010011394) #18 SLBP (ENSRFEG00010011166) #19 TMEM129 (ENSRFEG00010011065) #20 TACC3 (ENSRFEG00010010981) #21 FGFR3 (ENSRFEG00010010819) #22 LETM1 (ENSRFEG00010010660) #23 NSD2 (ENSRFEG00010010545) #24 NELFA (ENSRFEG00010010351) #25 C4orf48 (ENSRFEG00010010259) #26 NAT8L (ENSRFEG00010010189) #27 POLN (ENSRFEG00010009949) #28 HAUS3 (ENSRFEG00010009879) MXD4 (ENSRFEG00010009834) ZFYVE28 (ENSRFEG00010009726) CFAP99 (ENSRFEG00010009563) RNF4 (ENSRFEG00010009477) FAM193A (ENSRFEG00010009206) TNIP2 (ENSRFEG00010009107) SH3BP2 (ENSRFEG00010008972) ADD1 (ENSRFEG00010008824) Equus ANCESTRAL SPECIES 12 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217.ac ENSGT00500000045231 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 ENSGT00830000128422 Donkey MODERN SPECIES 22 TMEM175 (ENSEASG00005022646) DGKQ (ENSEASG00005022651) SLC26A1 (ENSEASG00005022673) IDUA (ENSEASG00005022661) FGFRL1 (ENSEASG00005022675) RNF212 (ENSEASG00005036465) ENSEASG00005022677 SPON2 (ENSEASG00005022679) #13 CTBP1 (ENSEASG00005022682) #14 MAEA (ENSEASG00005022693) #15 UVSSA (ENSEASG00005022702) #16 ENSEASG00005031810 SLBP (ENSEASG00005024705) #19 TMEM129 (ENSEASG00005022718) #20 TACC3 (ENSEASG00005022722) #21 FGFR3 (ENSEASG00005022725) #22 LETM1 (ENSEASG00005022727) #23 NSD2 (ENSEASG00005022729) #24 NELFA (ENSEASG00005022732) #25 C4orf48 (ENSEASG00005022733) #26 NAT8L (ENSEASG00005022734) #27 HAUS3 (ENSEASG00005022762) POLN (ENSEASG00005022744) #28 MXD4 (ENSEASG00005034001) ENSEASG00005028915 ENSEASG00005022764 CFAP99 (ENSEASG00005022766) ENSEASG00005036723 RNF4 (ENSEASG00005031929) ENSEASG00005035809 FAM193A (ENSEASG00005022783) Horse MODERN SPECIES 22 DGKQ (ENSECAG00000022309) IDUA (ENSECAG00000019632) SLC26A1 (ENSECAG00000022104) FGFRL1 (ENSECAG00000018253) ENSECAG00000052273 RNF212 (ENSECAG00000038589) ENSECAG00000018022 SPON2 (ENSECAG00000016940) #13 CTBP1 (ENSECAG00000015999) #14 MAEA (ENSECAG00000013742) #15 UVSSA (ENSECAG00000012127) #16 NKX1-1 (ENSECAG00000031807) #17 SLBP (ENSECAG00000011689) #19 TMEM129 (ENSECAG00000011634) #20 TACC3 (ENSECAG00000011380) #21 FGFR3 (ENSECAG00000019533) #22 LETM1 (ENSECAG00000018569) #23 NSD2 (ENSECAG00000011661) #24 NELFA (ENSECAG00000010240) #25 NAT8L (ENSECAG00000009867) #27 HAUS3 (ENSECAG00000004593) POLN (ENSECAG00000007802) #28 MXD4 (ENSECAG00000029077) ENSECAG00000058211 ZFYVE28 (ENSECAG00000024955) CFAP99 (ENSECAG00000029686) ENSECAG00000060379 FAM193A (ENSECAG00000024501) TNIP2 (ENSECAG00000024134) SH3BP2 (ENSECAG00000021841) ADD1 (ENSECAG00000013136) Carnivora ANCESTRAL SPECIES 5 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Felidae ANCESTRAL SPECIES 4 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Panthera ANCESTRAL SPECIES 5 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429.x #24 ENSGT00940000157429.w.a #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b Panthera_a ANCESTRAL SPECIES 2 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429.x #24 ENSGT00940000157429.w.a #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00390000011904 ENSGT00910000148326 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 lion MODERN SPECIES 4 GAK (ENSPLOG00000005676) TMEM175 (ENSPLOG00000005620) DGKQ (ENSPLOG00000005591) SLC26A1 (ENSPLOG00000005194) IDUA (ENSPLOG00000005177) FGFRL1 (ENSPLOG00000005150) ENSPLOG00000005044 SPON2 (ENSPLOG00000005028) #13 CTBP1 (ENSPLOG00000004983) #14 MAEA (ENSPLOG00000004894) #15 UVSSA (ENSPLOG00000004830) #16 NKX1-1 (ENSPLOG00000004811) #17 SLBP (ENSPLOG00000004771) #19 TMEM129 (ENSPLOG00000004687) #20 TACC3 (ENSPLOG00000004666) #21 FGFR3 (ENSPLOG00000004622) #22 LETM1 (ENSPLOG00000004551) #23 NSD2 (ENSPLOG00000004484) #24 NELFA (ENSPLOG00000004443) #25 C4orf48 (ENSPLOG00000004418) #26 ENSPLOG00000004406 #27 HAUS3 (ENSPLOG00000004393) ENSPLOG00000004384 MXD4 (ENSPLOG00000004376) ENSPLOG00000004365 ENSPLOG00000004349 CFAP99 (ENSPLOG00000004314) RNF4 (ENSPLOG00000004275) ENSPLOG00000004250 FAM193A (ENSPLOG00000004221) ENSPLOG00000004190 leopard MODERN SPECIES 25 FGFR3 (ENSPPRG00000018012) #22 LETM1 (ENSPPRG00000019273) #23 ENSPPRG00000000058 #24 ENSPPRG00000002562 #24 NELFA (ENSPPRG00000003777) #25 C4orf48 (ENSPPRG00000004524) #26 ENSPPRG00000004633 #27 HAUS3 (ENSPPRG00000007568) MXD4 (ENSPPRG00000009897) ENSPPRG00000012352 CFAP99 (ENSPPRG00000013633) RNF4 (ENSPPRG00000020972) ENSPPRG00000022001 FAM193A (ENSPPRG00000023349) TNIP2 (ENSPPRG00000022784) SH3BP2 (ENSPPRG00000000297) Cat MODERN SPECIES 235 TMEM175 (ENSFCAG00000012656) DGKQ (ENSFCAG00000012659) ENSFCAG00000026340 IDUA (ENSFCAG00000004723) FGFRL1 (ENSFCAG00000043643) RNF212 (ENSFCAG00000046779) ENSFCAG00000018929 SPON2 (ENSFCAG00000036077) #13 CTBP1 (ENSFCAG00000002265) #14 MAEA (ENSFCAG00000002950) #15 UVSSA (ENSFCAG00000002951) #16 NKX1-1 (ENSFCAG00000043543) #17 SLBP (ENSFCAG00000000169) #19 TMEM129 (ENSFCAG00000025439) #20 TACC3 (ENSFCAG00000000171) #21 FGFR3 (ENSFCAG00000018385) #22 LETM1 (ENSFCAG00000010616) #23 NSD2 (ENSFCAG00000037938) #24 NELFA (ENSFCAG00000010623) #25 CB1H4orf48 (ENSFCAG00000033658) #26 NAT8L (ENSFCAG00000044588) #27 HAUS3 (ENSFCAG00000027704) MXD4 (ENSFCAG00000042853) ZFYVE28 (ENSFCAG00000052700) CFAP99 (ENSFCAG00000037967) RNF4 (ENSFCAG00000004051) FAM193A (ENSFCAG00000004056) TNIP2 (ENSFCAG00000004062) ENSFCAG00000047433 SH3BP2 (ENSFCAG00000025020) ENSFCAG00000028314 Caniformia ANCESTRAL SPECIES 7 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Canidae ANCESTRAL SPECIES 21 ENSGT00390000010628 ENSGT00390000005639.a.a ENSGT00390000000470 ENSGT00850000132319.a.a.b ENSGT00530000063255.B ENSGT00390000006192 ENSGT00530000063669.a ENSGT00950000186028 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Red fox MODERN SPECIES 1 PROM1 (ENSVVUG00000015384) TAPT1 (ENSVVUG00000015407) LDB2 (ENSVVUG00000015458) QDPR (ENSVVUG00000015478) CLRN2 (ENSVVUG00000015482) LAP3 (ENSVVUG00000015485) MED28 (ENSVVUG00000015489) FAM184B (ENSVVUG00000015510) ENSVVUG00000015521 MAEA (ENSVVUG00000015526) #15 UVSSA (ENSVVUG00000015547) #16 FAM53A (ENSVVUG00000015571) #18 SLBP (ENSVVUG00000015578) #19 TMEM129 (ENSVVUG00000015588) #20 TACC3 (ENSVVUG00000015594) #21 FGFR3 (ENSVVUG00000015935) #22 LETM1 (ENSVVUG00000023797) #23 NSD2 (ENSVVUG00000023814) #24 NELFA (ENSVVUG00000023825) #25 ENSVVUG00000023827 #26 NAT8L (ENSVVUG00000023829) #27 POLN (ENSVVUG00000023835) #28 HAUS3 (ENSVVUG00000023845) MXD4 (ENSVVUG00000023848) ZFYVE28 (ENSVVUG00000023859) CFAP99 (ENSVVUG00000023861) RNF4 (ENSVVUG00000023864) ENSVVUG00000023867 FAM193A (ENSVVUG00000023873) TNIP2 (ENSVVUG00000023886) SH3BP2 (ENSVVUG00000023905) Canis_lupus ANCESTRAL SPECIES 23 ENSGT00390000005639.a.a ENSGT00940000155341.h.n ENSGT00390000000470 ENSGT00850000132319.a.a.b ENSGT00530000063255.B ENSGT00390000006192 ENSGT00530000063669.a ENSGT00950000186028 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Dingo MODERN SPECIES 138 ENSCAFG00020012229 ENSCAFG00020012245 QDPR (ENSCAFG00020012248) CLRN2 (ENSCAFG00020012251) LAP3 (ENSCAFG00020012262) MED28 (ENSCAFG00020012266) FAM184B (ENSCAFG00020012270) ENSCAFG00020012281 MAEA (ENSCAFG00020012285) #15 UVSSA (ENSCAFG00020012302) #16 NKX1-1 (ENSCAFG00020012312) #17 FAM53A (ENSCAFG00020012319) #18 SLBP (ENSCAFG00020012334) #19 TMEM129 (ENSCAFG00020012337) #20 TACC3 (ENSCAFG00020012340) #21 FGFR3 (ENSCAFG00020012349) #22 LETM1 (ENSCAFG00020012352) #23 ENSCAFG00020012359 NSD2 (ENSCAFG00020012364) #24 NELFA (ENSCAFG00020012377) #25 C4orf48 (ENSCAFG00020012395) #26 NAT8L (ENSCAFG00020012398) #27 POLN (ENSCAFG00020012402) #28 HAUS3 (ENSCAFG00020012427) MXD4 (ENSCAFG00020012430) ZFYVE28 (ENSCAFG00020012447) CFAP99 (ENSCAFG00020012449) RNF4 (ENSCAFG00020012490) FAM193A (ENSCAFG00020012546) TNIP2 (ENSCAFG00020012703) SH3BP2 (ENSCAFG00020012726) Dog MODERN SPECIES 22 ENSCAFG00845000676 ENSCAFG00845000652 QDPR (ENSCAFG00845000600) CLRN2 (ENSCAFG00845000538) LAP3 (ENSCAFG00845000510) MED28 (ENSCAFG00845000492) ENSCAFG00845000449 ENSCAFG00845000433 ENSCAFG00845000407 #15 UVSSA (ENSCAFG00845000348) #16 NKX1-1 (ENSCAFG00845000317) #17 FAM53A (ENSCAFG00845000302) #18 SLBP (ENSCAFG00845000261) #19 TMEM129 (ENSCAFG00845000213) #20 TACC3 (ENSCAFG00845013476) #21 FGFR3 (ENSCAFG00845013339) #22 LETM1 (ENSCAFG00845013211) #23 ENSCAFG00845013175 ENSCAFG00845013159 NSD2 (ENSCAFG00845013019) #24 NELFA (ENSCAFG00845012841) #25 C3H4orf48 (ENSCAFG00845012789) #26 NAT8L (ENSCAFG00845012758) #27 POLN (ENSCAFG00845012682) #28 MXD4 (ENSCAFG00845012610) ZFYVE28 (ENSCAFG00845012527) CFAP99 (ENSCAFG00845012463) RNF4 (ENSCAFG00845012388) FAM193A (ENSCAFG00845012303) TNIP2 (ENSCAFG00845012210) SH3BP2 (ENSCAFG00845012142) Caniformia_b ANCESTRAL SPECIES 5 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Mustelinae ANCESTRAL SPECIES 69 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 American mink DUPLICATION American mink MODERN SPECIES 139 SLC26A1 (ENSNVIG00000022268) FGFRL1 (ENSNVIG00000022275) RNF212 (ENSNVIG00000022299) ENSNVIG00000022306 SPON2 (ENSNVIG00000022329) #13 CTBP1 (ENSNVIG00000022335) #14 ENSNVIG00000022343 MAEA (ENSNVIG00000022353) #15 UVSSA (ENSNVIG00000022388) #16 NKX1-1 (ENSNVIG00000022402) #17 FAM53A (ENSNVIG00000022407) #18 SLBP (ENSNVIG00000022417) #19 TMEM129 (ENSNVIG00000000024) #20 ENSNVIG00000000076 ENSNVIG00000000109 #22 ENSNVIG00000000117 #22 LETM1 (ENSNVIG00000000166) #23 NSD2 (ENSNVIG00000000194) #24 NELFA (ENSNVIG00000000511) #25 C4orf48 (ENSNVIG00000000550) #26 NAT8L (ENSNVIG00000000559) #27 POLN (ENSNVIG00000000575) #28 HAUS3 (ENSNVIG00000000614) MXD4 (ENSNVIG00000000639) ENSNVIG00000000648 ENSNVIG00000000660 CFAP99 (ENSNVIG00000000667) RNF4 (ENSNVIG00000000683) FAM193A (ENSNVIG00000000739) TNIP2 (ENSNVIG00000000789) SH3BP2 (ENSNVIG00000000831) American mink MODERN SPECIES 139 IDUA (ENSNVIG00000022261) SLC26A1 (ENSNVIG00000022268) FGFRL1 (ENSNVIG00000022275) RNF212 (ENSNVIG00000022299) ENSNVIG00000022306 SPON2 (ENSNVIG00000022329) #13 CTBP1 (ENSNVIG00000022335) #14 ENSNVIG00000022343 MAEA (ENSNVIG00000022353) #15 UVSSA (ENSNVIG00000022388) #16 NKX1-1 (ENSNVIG00000022402) #17 FAM53A (ENSNVIG00000022407) #18 SLBP (ENSNVIG00000022417) #19 TMEM129 (ENSNVIG00000000024) #20 ENSNVIG00000000076 ENSNVIG00000000109 #22 ENSNVIG00000000117 #22 LETM1 (ENSNVIG00000000166) #23 NSD2 (ENSNVIG00000000194) #24 NELFA (ENSNVIG00000000511) #25 C4orf48 (ENSNVIG00000000550) #26 NAT8L (ENSNVIG00000000559) #27 POLN (ENSNVIG00000000575) #28 HAUS3 (ENSNVIG00000000614) MXD4 (ENSNVIG00000000639) ENSNVIG00000000648 ENSNVIG00000000660 CFAP99 (ENSNVIG00000000667) RNF4 (ENSNVIG00000000683) FAM193A (ENSNVIG00000000739) TNIP2 (ENSNVIG00000000789) Ferret MODERN SPECIES 334 DGKQ (ENSMPUG00000011237) SLC26A1 (ENSMPUG00000011230) IDUA (ENSMPUG00000011225) FGFRL1 (ENSMPUG00000011220) RNF212 (ENSMPUG00000011212) ENSMPUG00000011191 SPON2 (ENSMPUG00000011185) #13 CTBP1 (ENSMPUG00000011182) #14 MAEA (ENSMPUG00000011174) #15 UVSSA (ENSMPUG00000011171) #16 ENSMPUG00000011168 FAM53A (ENSMPUG00000011145) #18 SLBP (ENSMPUG00000011139) #19 TMEM129 (ENSMPUG00000011130) #20 ENSMPUG00000011062 #21 FGFR3 (ENSMPUG00000011055) #22 LETM1 (ENSMPUG00000011045) #23 NSD2 (ENSMPUG00000011036) #24 NELFA (ENSMPUG00000011031) #25 ENSMPUG00000011023 NAT8L (ENSMPUG00000011019) #27 HAUS3 (ENSMPUG00000011011) MXD4 (ENSMPUG00000010989) ZFYVE28 (ENSMPUG00000010981) CFAP99 (ENSMPUG00000010977) RNF4 (ENSMPUG00000010957) FAM193A (ENSMPUG00000010949) TNIP2 (ENSMPUG00000010947) SH3BP2 (ENSMPUG00000010942) ADD1 (ENSMPUG00000010933) MFSD10 (ENSMPUG00000010909) Ursidae ANCESTRAL SPECIES 29 ENSGT00940000159492 ENSGT00390000015494.e ENSGT01100000263544.c.a.a.b ENSGT00390000015494.f ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 ENSGT00940000164295 Giant Panda MODERN SPECIES 2 ENSAMEG00000016756 GAK (ENSAMEG00000016761) TMEM175 (ENSAMEG00000016795) DGKQ (ENSAMEG00000016800) SLC26A1 (ENSAMEG00000026648) IDUA (ENSAMEG00000016812) ENSAMEG00000029356 ENSAMEG00000024953 SPON2 (ENSAMEG00000023804) #13 CTBP1 (ENSAMEG00000016883) #14 ENSAMEG00000016890 #15 UVSSA (ENSAMEG00000016899) #16 ENSAMEG00000016915 #19 TMEM129 (ENSAMEG00000016921) #20 TACC3 (ENSAMEG00000016924) #21 FGFR3 (ENSAMEG00000014119) #22 LETM1 (ENSAMEG00000014210) #23 NSD2 (ENSAMEG00000014221) #24 NELFA (ENSAMEG00000014240) #25 NAT8L (ENSAMEG00000014278) #27 POLN (ENSAMEG00000014290) #28 HAUS3 (ENSAMEG00000014332) MXD4 (ENSAMEG00000014340) ZFYVE28 (ENSAMEG00000014349) CFAP99 (ENSAMEG00000028653) FAM193A (ENSAMEG00000014383) TNIP2 (ENSAMEG00000014405) SH3BP2 (ENSAMEG00000014415) ADD1 (ENSAMEG00000014449) MFSD10 (ENSAMEG00000014523) NOP14 (ENSAMEG00000014547) Ursus ANCESTRAL SPECIES 105 ENSGT00940000159527 ENSGT00390000015667 ENSGT00940000159492 ENSGT00390000015494.f ENSGT01100000263544.c.a.a.b ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00940000164052 ENSGT00390000002216 ENSGT00940000158581 ENSGT00830000128422 American black bear MODERN SPECIES 4289 FGFR3 (ENSUAMG00000008801) #22 ENSUAMG00000008783 #23 Atlantogenata ANCESTRAL SPECIES 108 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 Xenarthra ANCESTRAL SPECIES 1767 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 Armadillo MODERN SPECIES 1198 FGFR3 (ENSDNOG00000048730) #22 LETM1 (ENSDNOG00000014800) #23 Afrotheria ANCESTRAL SPECIES 135 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 Afrotheria_a ANCESTRAL SPECIES 137 ENSGT00390000015667 ENSGT00940000159492 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00390000000377 #16 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.b.a #23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 Hyrax MODERN SPECIES 5121 FGFR3 (ENSPCAG00000011500) #22 ENSPCAG00000011650 #23 Elephant MODERN SPECIES 164 TMEM175 (ENSLAFG00000004166) DGKQ (ENSLAFG00000004169) SLC26A1 (ENSLAFG00000012880) IDUA (ENSLAFG00000012872) FGFRL1 (ENSLAFG00000012522) ENSLAFG00000020574 SPON2 (ENSLAFG00000031358) #13 CTBP1 (ENSLAFG00000016498) #14 MAEA (ENSLAFG00000001960) #15 UVSSA (ENSLAFG00000013335) #16 ENSLAFG00000025171 #17 FAM53A (ENSLAFG00000000267) #18 SLBP (ENSLAFG00000012933) #19 TMEM129 (ENSLAFG00000021484) #20 ENSLAFG00000005224 #21 FGFR3 (ENSLAFG00000012619) #22 LETM1 (ENSLAFG00000022179) #23 NSD2 (ENSLAFG00000008162) #24 NELFA (ENSLAFG00000008168) #25 C4orf48 (ENSLAFG00000029945) #26 NAT8L (ENSLAFG00000030733) #27 POLN (ENSLAFG00000014515) #28 HAUS3 (ENSLAFG00000020863) MXD4 (ENSLAFG00000026709) ENSLAFG00000001042 RNF4 (ENSLAFG00000007382) ENSLAFG00000004078 ENSLAFG00000028553 ENSLAFG00000027379 SH3BP2 (ENSLAFG00000016902) ADD1 (ENSLAFG00000028230) Marsupialia ANCESTRAL SPECIES 7 ENSGT00390000015494 ENSGT01100000263544.c.a.a.b ENSGT00510000047107.B ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT01100000263544.c.a.a.b ENSGT00510000047107.B ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000158459.d ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342.l.a #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Diprotodontia ANCESTRAL SPECIES 10 ENSGT01100000263544.c.a.a.b ENSGT00510000047107.B ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000158459.d ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342.l.a #25 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 ENSGT00830000128422 Wallaby MODERN SPECIES 7302 ENSMEUG00000002856 #22 Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT01100000263544.c.a.a.b ENSGT00510000047107.B ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000158459.d ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342.l.a #25 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 ENSGT00830000128422 koala MODERN SPECIES 43 ENSPCIG00000013555 ENSPCIG00000013556 SPON2 (ENSPCIG00000013557) #13 CTBP1 (ENSPCIG00000013559) #14 MAEA (ENSPCIG00000013562) #15 ENSPCIG00000013563 NKX1-1 (ENSPCIG00000013564) #17 FAM53A (ENSPCIG00000013572) #18 SLBP (ENSPCIG00000013575) #19 TMEM129 (ENSPCIG00000013578) #20 ENSPCIG00000013274 FGFR3 (ENSPCIG00000001901) #22 ENSPCIG00000002025 ##23 NSD2 (ENSPCIG00000002101) #24 NELFA (ENSPCIG00000033023) #25 ENSPCIG00000037120 NAT8L (ENSPCIG00000002186) #27 ENSPCIG00000028500 POLN (ENSPCIG00000028499) #28 HAUS3 (ENSPCIG00000032540) MXD4 (ENSPCIG00000028502) ZFYVE28 (ENSPCIG00000028505) ENSPCIG00000028507 RNF4 (ENSPCIG00000028508) FAM193A (ENSPCIG00000028509) TNIP2 (ENSPCIG00000001126) SH3BP2 (ENSPCIG00000028511) Common wonbat MODERN SPECIES 1054 DGKQ (ENSVURG00010021140) IDUA (ENSVURG00010021152) SLC26A1 (ENSVURG00010021160) ENSVURG00010021170 FGFRL1 (ENSVURG00010021177) ENSVURG00010021189 #13 CTBP1 (ENSVURG00010021201) #14 MAEA (ENSVURG00010021222) #15 ENSVURG00010021231 NKX1-1 (ENSVURG00010021242) #17 FAM53A (ENSVURG00010021247) #18 SLBP (ENSVURG00010021255) #19 TMEM129 (ENSVURG00010021261) #20 ENSVURG00010021263 #21 ENSVURG00010021279 FGFR3 (ENSVURG00010021287) #22 ENSVURG00010021331 ##23 NSD2 (ENSVURG00010021411) #24 ENSVURG00010021490 ENSVURG00010021495 #25 ENSVURG00010021502 #27 HAUS3 (ENSVURG00010021506) MXD4 (ENSVURG00010021518) ENSVURG00010021528 ENSVURG00010021535 RNF4 (ENSVURG00010021546) FAM193A (ENSVURG00010021562) TNIP2 (ENSVURG00010021586) SH3BP2 (ENSVURG00010021621) ADD1 (ENSVURG00010021640) ENSVURG00010021651 Tasmanian devil MODERN SPECIES 5 SLC26A1 (ENSSHAG00000014844) IDUA (ENSSHAG00000014613) ENSSHAG00000014584 FGFRL1 (ENSSHAG00000013968) ENSSHAG00000012564 ENSSHAG00000012404 SPON2 (ENSSHAG00000012328) #13 CTBP1 (ENSSHAG00000010717) #14 MAEA (ENSSHAG00000006152) #15 ENSSHAG00000003641 FAM53A (ENSSHAG00000014457) #18 SLBP (ENSSHAG00000025869) #19 TMEM129 (ENSSHAG00000013825) #20 ENSSHAG00000013631 #21 ENSSHAG00000027667 FGFR3 (ENSSHAG00000009751) #22 ENSSHAG00000008701 ##23 NSD2 (ENSSHAG00000006750) #24 NELFA (ENSSHAG00000006075) #25 ENSSHAG00000023580 #26 NAT8L (ENSSHAG00000003078) #27 ENSSHAG00000012083 ENSSHAG00000028807 ZFYVE28 (ENSSHAG00000010322) ENSSHAG00000026056 FAM193A (ENSSHAG00000004929) TNIP2 (ENSSHAG00000003911) SH3BP2 (ENSSHAG00000001849) ENSSHAG00000021157 ADD1 (ENSSHAG00000011634) ENSSHAG00000011412 Opossum MODERN SPECIES 4 DGKQ (ENSMODG00000004482) SLC26A1 (ENSMODG00000004455) IDUA (ENSMODG00000038782) ENSMODG00000042625 FGFRL1 (ENSMODG00000004433) ENSMODG00000027834 ENSMODG00000004399 SPON2 (ENSMODG00000004394) #13 CTBP1 (ENSMODG00000004380) #14 MAEA (ENSMODG00000004354) #15 ENSMODG00000004336 FAM53A (ENSMODG00000004313) #18 SLBP (ENSMODG00000004304) #19 TMEM129 (ENSMODG00000004290) #20 ENSMODG00000004284 #21 FGFR3 (ENSMODG00000004268) #22 ENSMODG00000004184 ENSMODG00000004250 ##23 NSD2 (ENSMODG00000004162) #24 NELFA (ENSMODG00000004110) #25 ENSMODG00000024702 #26 NAT8L (ENSMODG00000004088) #27 POLN (ENSMODG00000004074) #28 MXD4 (ENSMODG00000004033) ZFYVE28 (ENSMODG00000004017) ENSMODG00000050224 RNF4 (ENSMODG00000003938) FAM193A (ENSMODG00000003925) TNIP2 (ENSMODG00000003892) SH3BP2 (ENSMODG00000003843) ADD1 (ENSMODG00000003815) Platypus MODERN SPECIES 15 NOP14 (ENSOANG00000005809) ENSOANG00000001782 ADD1 (ENSOANG00000001783) SH3BP2 (ENSOANG00000011388) ENSOANG00000029063 FAM193A (ENSOANG00000015175) RNF4 (ENSOANG00000045071) ENSOANG00000049568 ZFYVE28 (ENSOANG00000039812) ENSOANG00000041013 MXD4 (ENSOANG00000043646) NAT8L (ENSOANG00000039001) #27 NELFA (ENSOANG00000044855) #25 NSD2 (ENSOANG00000014321) #24 LETM1 (ENSOANG00000005820) #23 FGFR3 (ENSOANG00000003354) #22 ENSOANG00000046409 #21 Sauria ANCESTRAL SPECIES 6 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Archelosauria ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES ENSGT00940000159880.g #22 Testudinoidea ANCESTRAL SPECIES ENSGT00940000159880.g #22 Testudinidae ANCESTRAL SPECIES ENSGT00940000159880.g #22 Abingdon island giant tortoise MODERN SPECIES 72 ENSCABG00000016573 ENSCABG00000016546 #22 ENSCABG00000016535 ENSCABG00000016526 ENSCABG00000016521 Goode s thornscrub tortoise MODERN SPECIES 153 ENSGEVG00005015436 ENSGEVG00005015420 ENSGEVG00005015357 ENSGEVG00005015338 ENSGEVG00005015324 ENSGEVG00005015300 ENSGEVG00005015257 ENSGEVG00005015215 ENSGEVG00005015182 ENSGEVG00005015107 ENSGEVG00005015048 ENSGEVG00005014744 #22 ENSGEVG00005014682 ENSGEVG00005014652 ENSGEVG00005014560 ENSGEVG00005014487 ENSGEVG00005014395 ENSGEVG00005014251 ENSGEVG00005014219 ENSGEVG00005014176 ENSGEVG00005014148 Cryptodira ANCESTRAL SPECIES 2 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.h #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Chinese turtle MODERN SPECIES 2005 FAM53A (ENSPSIG00000012158) #18 TMEM129 (ENSPSIG00000011706) #20 TACC3 (ENSPSIG00000011605) #21 ENSPSIG00000001733 FGFR3 (ENSPSIG00000009934) #22 ENSPSIG00000008785 ##23 NSD2 (ENSPSIG00000006591) #24 NELFA (ENSPSIG00000017673) #25 ENSPSIG00000017624 #26 C4orf48 (ENSPSIG00000017545) #26 NAT8L (ENSPSIG00000017371) #27 ENSPSIG00000001726 POLN (ENSPSIG00000016926) #28 HAUS3 (ENSPSIG00000016557) MXD4 (ENSPSIG00000016320) ENSPSIG00000015986 ENSPSIG00000001717 ZFYVE28 (ENSPSIG00000015824) CFAP99 (ENSPSIG00000015452) RNF4 (ENSPSIG00000014750) Testudinoidea ANCESTRAL SPECIES 10 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.h #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581.d Testudinidae ANCESTRAL SPECIES 11 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00940000172282 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.h #22 ENSGT00950000183167.b ##23 ENSGT00940000157429.m #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00960000189789 ENSGT00950000182932.B #27 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581.d Goode s thornscrub tortoise MODERN SPECIES 19 POLR1A (ENSGEVG00005001447) ST3GAL5 (ENSGEVG00005001482) ATOH8 (ENSGEVG00005001500) FGFRL1 (ENSGEVG00005001514) ENSGEVG00005001538 SPON2 (ENSGEVG00005001580) #13 ENSGEVG00005001606 CTBP1 (ENSGEVG00005001634) #14 MAEA (ENSGEVG00005001690) #15 ENSGEVG00005001722 ENSGEVG00005001741 FAM53A (ENSGEVG00005001753) #18 SLBP (ENSGEVG00005001772) #19 TMEM129 (ENSGEVG00005001790) #20 TACC3 (ENSGEVG00005001810) #21 ENSGEVG00005001847 #22 ENSGEVG00005001880 ##23 NSD2 (ENSGEVG00005001909) #24 NELFA (ENSGEVG00005001927) #25 C4orf48 (ENSGEVG00005001945) #26 ENSGEVG00005001957 NAT8L (ENSGEVG00005001962) #27 HAUS3 (ENSGEVG00005001972) MXD4 (ENSGEVG00005001978) ZFYVE28 (ENSGEVG00005002043) CFAP99 (ENSGEVG00005002179) RNF4 (ENSGEVG00005002218) FAM193A (ENSGEVG00005002232) TNIP2 (ENSGEVG00005002252) SH3BP2 (ENSGEVG00005002263) ADD1 (ENSGEVG00005002310) Abingdon island giant tortoise MODERN SPECIES 2611 ENSCABG00000006908 ENSCABG00000006895 #22 ENSCABG00000006879 ##23 ENSCABG00000006873 #24 SLIT2 (ENSCABG00000006833) PACRGL (ENSCABG00000006828) KCNIP4 (ENSCABG00000006825) Emydidae ANCESTRAL SPECIES 1 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.h #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581.d painted turtle MODERN SPECIES 725 PTCD3 (ENSCPBG00000001152) POLR1A (ENSCPBG00000001115) ST3GAL5 (ENSCPBG00000001089) ATOH8 (ENSCPBG00000001027) FGFRL1 (ENSCPBG00000001000) ENSCPBG00000000981 SPON2 (ENSCPBG00000000965) #13 CTBP1 (ENSCPBG00000000892) #14 MAEA (ENSCPBG00000000853) #15 ENSCPBG00000000824 ENSCPBG00000000801 FAM53A (ENSCPBG00000000763) #18 SLBP (ENSCPBG00000000746) #19 TMEM129 (ENSCPBG00000000738) #20 TACC3 (ENSCPBG00000000303) #21 FGFR3 (ENSCPBG00000025109) #22 ENSCPBG00000025105 ##23 ENSCPBG00000025103 #24 ENSCPBG00000025097 #24 NELFA (ENSCPBG00000025095) #25 ENSCPBG00000025091 #26 NAT8L (ENSCPBG00000025087) #27 POLN (ENSCPBG00000025017) #28 HAUS3 (ENSCPBG00000025003) MXD4 (ENSCPBG00000025001) ZFYVE28 (ENSCPBG00000024998) ENSCPBG00000024996 Three-toed box turtle MODERN SPECIES 26 PTCD3 (ENSTMTG00000002726) POLR1A (ENSTMTG00000002551) ST3GAL5 (ENSTMTG00000002504) ATOH8 (ENSTMTG00000002498) FGFRL1 (ENSTMTG00000002490) ENSTMTG00000002481 SPON2 (ENSTMTG00000002478) #13 CTBP1 (ENSTMTG00000002467) #14 MAEA (ENSTMTG00000002462) #15 ENSTMTG00000002454 NKX1-1 (ENSTMTG00000002450) #17 FAM53A (ENSTMTG00000002446) #18 SLBP (ENSTMTG00000002441) #19 TMEM129 (ENSTMTG00000002438) #20 TACC3 (ENSTMTG00000002422) #21 FGFR3 (ENSTMTG00000002395) #22 ENSTMTG00000002384 ##23 NSD2 (ENSTMTG00000002368) #24 NELFA (ENSTMTG00000002358) #25 ENSTMTG00000002350 #26 C4orf48 (ENSTMTG00000002341) #26 NAT8L (ENSTMTG00000002337) #27 POLN (ENSTMTG00000002310) #28 HAUS3 (ENSTMTG00000002295) MXD4 (ENSTMTG00000002289) ZFYVE28 (ENSTMTG00000002279) CFAP99 (ENSTMTG00000002255) FAM193A (ENSTMTG00000002228) TNIP2 (ENSTMTG00000002209) SH3BP2 (ENSTMTG00000002197) ADD1 (ENSTMTG00000002162) Archosauria ANCESTRAL SPECIES 1 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Australian saltwater crocodile MODERN SPECIES 65 IMMT (ENSCPRG00005000573) PTCD3 (ENSCPRG00005000603) POLR1A (ENSCPRG00005000706) ST3GAL5 (ENSCPRG00005001127) FGFRL1 (ENSCPRG00005001162) ENSCPRG00005001189 SPON2 (ENSCPRG00005001192) #13 CTBP1 (ENSCPRG00005001249) #14 MAEA (ENSCPRG00005001284) #15 ENSCPRG00005001306 FAM53A (ENSCPRG00005001335) #18 SLBP (ENSCPRG00005001341) #19 ENSCPRG00005001347 #19 TMEM129 (ENSCPRG00005001354) #20 TACC3 (ENSCPRG00005001402) #21 FGFR3 (ENSCPRG00005001439) #22 ENSCPRG00005001480 ##23 NSD2 (ENSCPRG00005001494) #24 NELFA (ENSCPRG00005001509) #25 C4orf48 (ENSCPRG00005001551) #26 NAT8L (ENSCPRG00005001582) #27 POLN (ENSCPRG00005001601) #28 HAUS3 (ENSCPRG00005001652) MXD4 (ENSCPRG00005001655) ZFYVE28 (ENSCPRG00005001725) CFAP99 (ENSCPRG00005001738) RNF4 (ENSCPRG00005001756) FAM193A (ENSCPRG00005001785) TNIP2 (ENSCPRG00005001931) SH3BP2 (ENSCPRG00005001952) ADD1 (ENSCPRG00005001982) Aves ANCESTRAL SPECIES 3 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 African ostrich MODERN SPECIES 1016 POLR1A (ENSSCUG00000015443) ST3GAL5 (ENSSCUG00000015448) ENSSCUG00000015450 FGFRL1 (ENSSCUG00000015454) ENSSCUG00000015455 SPON2 (ENSSCUG00000015460) #13 CTBP1 (ENSSCUG00000015468) #14 MAEA (ENSSCUG00000015471) #15 ENSSCUG00000015472 FAM53A (ENSSCUG00000015478) #18 SLBP (ENSSCUG00000015479) #19 ENSSCUG00000015480 #19 TMEM129 (ENSSCUG00000015481) #20 TACC3 (ENSSCUG00000015483) #21 ENSSCUG00000015487 FGFR3 (ENSSCUG00000015489) #22 ENSSCUG00000015494 ##23 NSD2 (ENSSCUG00000015496) #24 NELFA (ENSSCUG00000015506) #25 ENSSCUG00000015507 #26 ENSSCUG00000015508 C4orf48 (ENSSCUG00000015511) #26 ENSSCUG00000015512 NAT8L (ENSSCUG00000015515) #27 POLN (ENSSCUG00000015522) #28 HAUS3 (ENSSCUG00000015531) MXD4 (ENSSCUG00000015532) ZFYVE28 (ENSSCUG00000015535) CFAP99 (ENSSCUG00000015539) RNF4 (ENSSCUG00000015543) FAM193A (ENSSCUG00000015560) Neognathae ANCESTRAL SPECIES 5 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Galloanserae ANCESTRAL SPECIES 5 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES ENSGT00940000159880.i #22 Japanese quail MODERN SPECIES 545 ENSCJPG00005002759 ENSCJPG00005002757 #22 Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.j #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880.j #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Chicken MODERN SPECIES 33 ST3GAL5 (ENSGALG00010017751) ATOH8 (ENSGALG00010017718) FGFRL1 (ENSGALG00010017706) RNF212 (ENSGALG00010017689) TMED11 (ENSGALG00010017682) SPON2 (ENSGALG00010017676) #13 CTBP1 (ENSGALG00010017665) #14 MAEA (ENSGALG00010017646) #15 UVSSA (ENSGALG00010016107) NKX1-1 (ENSGALG00010016036) #17 FAM53A (ENSGALG00010016631) #18 SLBP (ENSGALG00010016616) #19 ENSGALG00010016603 #19 TMEM129 (ENSGALG00010016592) #20 TACC3 (ENSGALG00010016211) #21 FGFR3 (ENSGALG00010016940) #22 ENSGALG00010016933 LETM1 (ENSGALG00010016924) ##23 NSD2 (ENSGALG00010016910) #24 NELFA (ENSGALG00010016741) #25 ENSGALG00010016735 #26 C4orf48 (ENSGALG00010016731) #26 NAT8L (ENSGALG00010017631) #27 POLN (ENSGALG00010017619) #28 HAUS3 (ENSGALG00010017613) MXD4 (ENSGALG00010017600) ZFYVE28 (ENSGALG00010017586) CFAP99 (ENSGALG00010017561) RNF4 (ENSGALG00010017547) FAM193A (ENSGALG00010017533) TNIP2 (ENSGALG00010017513) Turkey MODERN SPECIES 24 ENSMGAG00000013014 ENSMGAG00000017780 ENSMGAG00000013021 ENSMGAG00000013023 ENSMGAG00000020900 ENSMGAG00000021919 ENSMGAG00000017584 ENSMGAG00000013033 NAT8L (ENSMGAG00000016877) #27 ENSMGAG00000013044 #25 ENSMGAG00000020055 #26 ENSMGAG00000019205 #26 ENSMGAG00000013051 #24 ENSMGAG00000020247 #24 ENSMGAG00000013057 ##23 ENSMGAG00000013059 #22 ENSMGAG00000018675 ENSMGAG00000020226 ENSMGAG00000017730 ENSMGAG00000012664 ENSMGAG00000021515 ENSMGAG00000017053 ENSMGAG00000019461 ENSMGAG00000012687 ENSMGAG00000016617 WDR1 (ENSMGAG00000012690) ENSMGAG00000022219 ENSMGAG00000012700 ENSMGAG00000012697 OTOP1 (ENSMGAG00000012701) ZBTB49 (ENSMGAG00000012706) Japanese quail MODERN SPECIES 22 ST3GAL5 (ENSCJPG00005004831) ATOH8 (ENSCJPG00005004828) FGFRL1 (ENSCJPG00005004823) RNF212 (ENSCJPG00005004815) ENSCJPG00005004814 SPON2 (ENSCJPG00005004812) #13 CTBP1 (ENSCJPG00005004796) #14 MAEA (ENSCJPG00005004779) #15 ENSCJPG00005004776 NKX1-1 (ENSCJPG00005004773) #17 FAM53A (ENSCJPG00005004768) #18 SLBP (ENSCJPG00005004762) #19 ENSCJPG00005004758 #19 TMEM129 (ENSCJPG00005004755) #20 TACC3 (ENSCJPG00005004752) #21 ENSCJPG00005001291 #22 ENSCJPG00005001087 ##23 NSD2 (ENSCJPG00005000902) #24 NELFA (ENSCJPG00005000857) #25 ENSCJPG00005000849 #26 C4orf48 (ENSCJPG00005000845) #26 NAT8L (ENSCJPG00005000839) #27 POLN (ENSCJPG00005000822) #28 HAUS3 (ENSCJPG00005000834) MXD4 (ENSCJPG00005000809) ZFYVE28 (ENSCJPG00005000799) CFAP99 (ENSCJPG00005000780) RNF4 (ENSCJPG00005000772) FAM193A (ENSCJPG00005000765) TNIP2 (ENSCJPG00005000763) SH3BP2 (ENSCJPG00005000067) Anatidae ANCESTRAL SPECIES 2 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Pink-footed goose MODERN SPECIES 7 ATOH8 (ENSABRG00000009126) FGFRL1 (ENSABRG00000009111) RNF212 (ENSABRG00000009079) ENSABRG00000009069 SPON2 (ENSABRG00000009053) #13 CTBP1 (ENSABRG00000009016) #14 MAEA (ENSABRG00000008991) #15 ENSABRG00000008962 NKX1-1 (ENSABRG00000008955) #17 FAM53A (ENSABRG00000008927) #18 SLBP (ENSABRG00000008914) #19 ENSABRG00000008878 #19 TMEM129 (ENSABRG00000008871) #20 TACC3 (ENSABRG00000008855) #21 ENSABRG00000008817 FGFR3 (ENSABRG00000008800) #22 ENSABRG00000008782 ##23 NSD2 (ENSABRG00000008744) #24 NELFA (ENSABRG00000008734) #25 ENSABRG00000008727 #26 NAT8L (ENSABRG00000008714) #27 POLN (ENSABRG00000008656) #28 HAUS3 (ENSABRG00000008704) MXD4 (ENSABRG00000008646) ZFYVE28 (ENSABRG00000008507) CFAP99 (ENSABRG00000008431) RNF4 (ENSABRG00000008422) FAM193A (ENSABRG00000007852) TNIP2 (ENSABRG00000007791) SH3BP2 (ENSABRG00000007608) ADD1 (ENSABRG00000006412) Duck MODERN SPECIES 22 ST3GAL5 (ENSAPLG00000014680) ATOH8 (ENSAPLG00000022131) FGFRL1 (ENSAPLG00000014983) ENSAPLG00000019361 ENSAPLG00000019372 ENSAPLG00000015003 SPON2 (ENSAPLG00000015017) #13 CTBP1 (ENSAPLG00000015635) #14 MAEA (ENSAPLG00000015852) #15 ENSAPLG00000015894 ENSAPLG00000021364 FAM53A (ENSAPLG00000015975) #18 SLBP (ENSAPLG00000015989) #19 TMEM129 (ENSAPLG00000016182) #20 TACC3 (ENSAPLG00000016198) #21 FGFR3 (ENSAPLG00000016333) #22 ENSAPLG00000003508 ##23 NSD2 (ENSAPLG00000003770) #24 NELFA (ENSAPLG00000004120) #25 ENSAPLG00000016870 #26 C4orf48 (ENSAPLG00000027604) #26 NAT8L (ENSAPLG00000004458) #27 POLN (ENSAPLG00000004531) #28 HAUS3 (ENSAPLG00000004991) MXD4 (ENSAPLG00000004997) ZFYVE28 (ENSAPLG00000004999) CFAP99 (ENSAPLG00000005144) RNF4 (ENSAPLG00000005244) FAM193A (ENSAPLG00000005276) TNIP2 (ENSAPLG00000005556) SH3BP2 (ENSAPLG00000005759) Neognathae_b ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Neognathae_c ANCESTRAL SPECIES 3 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318.l.a ENSGT00390000010318.l.b ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Kakapo MODERN SPECIES 24 ST3GAL5 (ENSSHBG00005001046) ATOH8 (ENSSHBG00005001047) FGFRL1 (ENSSHBG00005013918) ENSSHBG00005013933 SPON2 (ENSSHBG00005013942) #13 CTBP1 (ENSSHBG00005013962) #14 MAEA (ENSSHBG00005014007) #15 ENSSHBG00005014033 ENSSHBG00005014047 NKX1-1 (ENSSHBG00005014065) #17 FAM53A (ENSSHBG00005014082) #18 SLBP (ENSSHBG00005014090) #19 ENSSHBG00005014102 #19 TMEM129 (ENSSHBG00005014117) #20 TACC3 (ENSSHBG00005014126) #21 FGFR3 (ENSSHBG00005014171) #22 ENSSHBG00005014181 ##23 NSD2 (ENSSHBG00005014199) #24 NELFA (ENSSHBG00005014227) #25 C4orf48 (ENSSHBG00005014241) #26 NAT8L (ENSSHBG00005014256) #27 HAUS3 (ENSSHBG00005014273) MXD4 (ENSSHBG00005014280) ENSSHBG00005014294 ENSSHBG00005014299 CFAP99 (ENSSHBG00005014309) RNF4 (ENSSHBG00005014316) ENSSHBG00005014326 ENSSHBG00005014338 ENSSHBG00005014358 FAM193A (ENSSHBG00005014440) Golden eagle MODERN SPECIES POLR1A (ENSACCG00020000087) ST3GAL5 (ENSACCG00020000088) ATOH8 (ENSACCG00020000089) FGFRL1 (ENSACCG00020000090) ENSACCG00020000091 SPON2 (ENSACCG00020000092) #13 CTBP1 (ENSACCG00020000093) #14 MAEA (ENSACCG00020000094) #15 ENSACCG00020000095 NKX1-1 (ENSACCG00020000096) #17 FAM53A (ENSACCG00020000097) #18 SLBP (ENSACCG00020000098) #19 ENSACCG00020000099 #19 TMEM129 (ENSACCG00020000100) #20 TACC3 (ENSACCG00020000101) #21 FGFR3 (ENSACCG00020000102) #22 ENSACCG00020000103 ##23 NSD2 (ENSACCG00020000104) #24 NELFA (ENSACCG00020000106) #25 ENSACCG00020000107 #26 C4orf48 (ENSACCG00020000108) #26 ENSACCG00020000109 #27 ENSACCG00020000110 #27 HAUS3 (ENSACCG00020000111) MXD4 (ENSACCG00020000112) ZFYVE28 (ENSACCG00020000113) CFAP99 (ENSACCG00020000114) ENSACCG00020000115 ENSACCG00020000116 FAM193A (ENSACCG00020000117) TNIP2 (ENSACCG00020000118) Passeriformes ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 Great tit MODERN SPECIES 23 POLR1A (ENSPMJG00000016785) ST3GAL5 (ENSPMJG00000016784) FGFRL1 (ENSPMJG00000016781) RNF212 (ENSPMJG00000016778) ENSPMJG00000016777 SPON2 (ENSPMJG00000016776) #13 CTBP1 (ENSPMJG00000016774) #14 MAEA (ENSPMJG00000016773) #15 ENSPMJG00000016772 NKX1-1 (ENSPMJG00000016771) #17 FAM53A (ENSPMJG00000016765) #18 SLBP (ENSPMJG00000016763) #19 TMEM129 (ENSPMJG00000016762) #20 TACC3 (ENSPMJG00000016761) #21 ENSPMJG00000016756 FGFR3 (ENSPMJG00000016755) #22 ENSPMJG00000016753 ##23 NELFA (ENSPMJG00000016751) #25 NSD2 (ENSPMJG00000016750) #24 ENSPMJG00000016749 #26 NAT8L (ENSPMJG00000016748) #27 POLN (ENSPMJG00000016747) #28 HAUS3 (ENSPMJG00000016746) MXD4 (ENSPMJG00000016745) ZFYVE28 (ENSPMJG00000016738) CFAP99 (ENSPMJG00000016737) RNF4 (ENSPMJG00000016736) FAM193A (ENSPMJG00000016722) TNIP2 (ENSPMJG00000016720) SH3BP2 (ENSPMJG00000016718) ADD1 (ENSPMJG00000016716) Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581.a Flycatcher MODERN SPECIES 22 POLR1A (ENSFALG00000010082) ST3GAL5 (ENSFALG00000010076) FGFRL1 (ENSFALG00000010071) RNF212 (ENSFALG00000026442) ENSFALG00000010064 SPON2 (ENSFALG00000010062) #13 CTBP1 (ENSFALG00000010053) #14 MAEA (ENSFALG00000010037) #15 ENSFALG00000010020 ENSFALG00000024515 FAM53A (ENSFALG00000010014) #18 SLBP (ENSFALG00000010003) #19 ENSFALG00000009994 #19 TMEM129 (ENSFALG00000009990) #20 TACC3 (ENSFALG00000009974) #21 FGFR3 (ENSFALG00000009957) #22 ENSFALG00000009940 ##23 NSD2 (ENSFALG00000009928) #24 NELFA (ENSFALG00000024492) #25 ENSFALG00000023813 #26 C4orf48 (ENSFALG00000009893) #26 NAT8L (ENSFALG00000009890) #27 POLN (ENSFALG00000009880) #28 HAUS3 (ENSFALG00000009872) MXD4 (ENSFALG00000028128) ZFYVE28 (ENSFALG00000009861) CFAP99 (ENSFALG00000009853) RNF4 (ENSFALG00000028670) FAM193A (ENSFALG00000009833) TNIP2 (ENSFALG00000009830) SH3BP2 (ENSFALG00000009826) Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581.a Medium ground finch MODERN SPECIES 161 CTBP1 (ENSGFOG00000007273) #14 MAEA (ENSGFOG00000007257) #15 ENSGFOG00000007249 FAM53A (ENSGFOG00000007246) #18 SLBP (ENSGFOG00000007240) #19 ENSGFOG00000007232 #19 TMEM129 (ENSGFOG00000007227) #20 TACC3 (ENSGFOG00000007220) #21 FGFR3 (ENSGFOG00000004862) #22 ENSGFOG00000004673 ##23 Passeroidea ANCESTRAL SPECIES 4 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000008738.t #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT01080000257700 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 Zebra finch MODERN SPECIES 25 ST3GAL5 (ENSTGUG00000010696) ATOH8 (ENSTGUG00000010695) FGFRL1 (ENSTGUG00000010690) RNF212 (ENSTGUG00000010685) ENSTGUG00000010674 SPON2 (ENSTGUG00000010671) #13 CTBP1 (ENSTGUG00000010662) #14 MAEA (ENSTGUG00000010646) #15 ENSTGUG00000010640 NKX1-1 (ENSTGUG00000029299) #17 FAM53A (ENSTGUG00000010633) #18 SLBP (ENSTGUG00000010626) #19 ENSTGUG00000026053 #19 TMEM129 (ENSTGUG00000010623) #20 TACC3 (ENSTGUG00000010612) #21 FGFR3 (ENSTGUG00000010583) #22 ENSTGUG00000010578 ENSTGUG00000010569 ##23 NSD2 (ENSTGUG00000010558) #24 NELFA (ENSTGUG00000010548) #25 ENSTGUG00000022999 #26 C4orf48 (ENSTGUG00000010545) #26 NAT8L (ENSTGUG00000027909) #27 POLN (ENSTGUG00000010536) #28 MXD4 (ENSTGUG00000010530) ZFYVE28 (ENSTGUG00000010524) CFAP99 (ENSTGUG00000010519) RNF4 (ENSTGUG00000027704) FAM193A (ENSTGUG00000010507) TNIP2 (ENSTGUG00000010505) SH3BP2 (ENSTGUG00000010489) Common canary MODERN SPECIES 2 POLR1A (ENSSCAG00000014945) ST3GAL5 (ENSSCAG00000014951) ENSSCAG00000014958 FGFRL1 (ENSSCAG00000014969) ENSSCAG00000014981 SPON2 (ENSSCAG00000014992) #13 CTBP1 (ENSSCAG00000015001) #14 MAEA (ENSSCAG00000015016) #15 ENSSCAG00000015024 NKX1-1 (ENSSCAG00000015033) #17 FAM53A (ENSSCAG00000015042) #18 SLBP (ENSSCAG00000015046) #19 ENSSCAG00000015050 #19 TMEM129 (ENSSCAG00000015058) #20 TACC3 (ENSSCAG00000015066) #21 FGFR3 (ENSSCAG00000015145) #22 ENSSCAG00000015296 ENSSCAG00000015304 ##23 NSD2 (ENSSCAG00000015307) #24 NELFA (ENSSCAG00000015311) #25 ENSSCAG00000015313 #26 C4orf48 (ENSSCAG00000015314) #26 NAT8L (ENSSCAG00000015317) #27 HAUS3 (ENSSCAG00000015319) MXD4 (ENSSCAG00000015320) ZFYVE28 (ENSSCAG00000015322) CFAP99 (ENSSCAG00000015324) RNF4 (ENSSCAG00000015329) FAM193A (ENSSCAG00000015363) TNIP2 (ENSSCAG00000015434) SH3BP2 (ENSSCAG00000015437) Lepidosauria ANCESTRAL SPECIES 80 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00940000172282 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904.o ENSGT00940000160120 ENSGT00940000157217 ENSGT00500000045231 tuatara MODERN SPECIES 464 RNF4 (ENSSPUG00000015569) ENSSPUG00000015581 ENSSPUG00000015587 ENSSPUG00000015592 ENSSPUG00000015598 CFAP99 (ENSSPUG00000015612) MXD4 (ENSSPUG00000015621) HAUS3 (ENSSPUG00000015629) POLN (ENSSPUG00000015690) #28 NAT8L (ENSSPUG00000015883) #27 C4orf48 (ENSSPUG00000015889) #26 NELFA (ENSSPUG00000015899) #25 ENSSPUG00000015905 #24 ENSSPUG00000015928 #24 ENSSPUG00000015956 ##23 FGFR3 (ENSSPUG00000015970) #22 TACC3 (ENSSPUG00000015987) #21 TMEM129 (ENSSPUG00000015996) #20 SLBP (ENSSPUG00000016007) #19 FAM53A (ENSSPUG00000016012) #18 ENSSPUG00000016020 ENSSPUG00000016031 MAEA (ENSSPUG00000016045) #15 CTBP1 (ENSSPUG00000016066) #14 Episquamata ANCESTRAL SPECIES 2 ENSGT00390000016051 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000160120 ENSGT00500000045231 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000157727 ENSGT00890000139463.b.a ENSGT00390000014726 ENSGT00940000159802 ENSGT00940000160066 ENSGT00940000153692.B Laterata ANCESTRAL SPECIES ENSGT00390000016051 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00940000159900 #13 ENSGT00940000157061.a.j #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738.s #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000160120 ENSGT00500000045231 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000157727 ENSGT00890000139463.b.a ENSGT00390000014726 ENSGT00940000159802 ENSGT00940000160066 ENSGT00940000153692.B Common wall lizard MODERN SPECIES 13 ENSPMRG00000003670 ENSPMRG00000003678 FGFRL1 (ENSPMRG00000003682) SPON2 (ENSPMRG00000003689) #13 ENSPMRG00000003704 #14 ENSPMRG00000003758 #14 ENSPMRG00000003773 #15 ENSPMRG00000003785 #15 ENSPMRG00000003791 NKX1-1 (ENSPMRG00000003811) #17 ENSPMRG00000003812 FAM53A (ENSPMRG00000003814) #18 SLBP (ENSPMRG00000003818) #19 TMEM129 (ENSPMRG00000003821) #20 TACC3 (ENSPMRG00000003823) #21 FGFR3 (ENSPMRG00000003828) #22 ENSPMRG00000003835 ##23 NSD2 (ENSPMRG00000003856) #24 NELFA (ENSPMRG00000003931) #25 C4orf48 (ENSPMRG00000003949) #26 NAT8L (ENSPMRG00000003953) #27 MXD4 (ENSPMRG00000003956) CFAP99 (ENSPMRG00000003968) ENSPMRG00000003974 ZFAND4 (ENSPMRG00000003978) ENSPMRG00000003987 ENSPMRG00000003993 ENSPMRG00000003999 ENSPMRG00000004005 ENSPMRG00000004021 RBP3 (ENSPMRG00000004028) Argentine black and white tegu MODERN SPECIES 44 KCTD4 (ENSSMRG00000022798) GTF2F2 (ENSSMRG00000022797) TPT1 (ENSSMRG00000022795) ENSSMRG00000022794 ST3GAL5 (ENSSMRG00000022793) ATOH8 (ENSSMRG00000022792) FGFRL1 (ENSSMRG00000022790) SPON2 (ENSSMRG00000022788) #13 CTBP1 (ENSSMRG00000022787) #14 MAEA (ENSSMRG00000022785) #15 ENSSMRG00000022784 NKX1-1 (ENSSMRG00000022783) #17 SLBP (ENSSMRG00000022781) #19 TMEM129 (ENSSMRG00000022780) #20 ENSSMRG00000022779 FGFR3 (ENSSMRG00000022778) #22 ENSSMRG00000022777 ENSSMRG00000022776 NAT8L (ENSSMRG00000022775) #27 C4orf48 (ENSSMRG00000022774) #26 NELFA (ENSSMRG00000022773) #25 NSD2 (ENSSMRG00000022772) #24 ENSSMRG00000022771 ##23 ENSSMRG00000022769 ENSSMRG00000022768 ENSSMRG00000022767 ENSSMRG00000022766 RBP3 (ENSSMRG00000022765) GDF2 (ENSSMRG00000022764) Toxicofera ANCESTRAL SPECIES 2 ENSGT00950000183015.B.b ENSGT00940000153692.B ENSGT00940000160066 ENSGT00940000159802 ENSGT00390000014726 ENSGT00890000139463.b.a ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00500000045231 ENSGT00940000160120 ENSGT00950000182932.B #27 ENSGT00390000013043 #26 ENSGT00390000005342 #25 ENSGT00940000157429 #24 ENSGT00950000183167.b ##23 ENSGT00940000159880 #22 ENSGT00940000158858 #21 ENSGT00390000008738.s #19 ENSGT00940000162861 #17 ENSGT00940000164256 ENSGT00940000153203.B #15 ENSGT00940000157061.a.j #14 ENSGT00940000159900 #13 ENSGT00940000156736 ENSGT00940000161151 ENSGT00940000157929 ENSGT00940000158961 ENSGT00390000006051 ENSGT00940000159552 ENSGT00390000016051 ENSGT00940000163575 Elapidae ANCESTRAL SPECIES 13 ENSGT00730000111333 ENSGT00940000159008 ENSGT00940000158057 ENSGT00390000014056 ENSGT01000000218120 ENSGT00940000158274 ENSGT00500000044923 ENSGT00950000182937.A.a ENSGT00390000015682 ENSGT00940000160120 ENSGT00950000182932.B #27 ENSGT00390000013043 #26 ENSGT00390000005342 #25 ENSGT00940000157429 #24 ENSGT00950000183167.b ##23 ENSGT00940000159880 #22 ENSGT00940000158858 #21 ENSGT00390000008738.s #19 ENSGT00940000162861 #17 ENSGT00940000164256 ENSGT00940000153203.B #15 ENSGT00940000157061.a.j #14 ENSGT00940000159900 #13 ENSGT00940000156736 ENSGT00940000161151 ENSGT00940000157929 ENSGT00940000158961 ENSGT00390000006051 ENSGT00940000159552 ENSGT00390000016051 ENSGT00940000163575 Indian cobra MODERN SPECIES 5 DRGX (ENSNNAG00000013325) ERCC6 (ENSNNAG00000013113) CXCL12 (ENSNNAG00000013076) ENSNNAG00000013052 PAOX (ENSNNAG00000013002) MTG1 (ENSNNAG00000012981) CHUK (ENSNNAG00000011971) COG3 (ENSNNAG00000008861) MXD4 (ENSNNAG00000008676) NAT8L (ENSNNAG00000008658) #27 C4orf48 (ENSNNAG00000008605) #26 NELFA (ENSNNAG00000008587) #25 ENSNNAG00000008473 #24 ENSNNAG00000008402 #24 ENSNNAG00000008343 ##23 FGFR3 (ENSNNAG00000008222) #22 ENSNNAG00000008186 SLBP (ENSNNAG00000008157) #19 NKX1-1 (ENSNNAG00000008125) #17 ENSNNAG00000008082 MAEA (ENSNNAG00000008048) #15 ENSNNAG00000008030 CTBP1 (ENSNNAG00000007965) #14 SPON2 (ENSNNAG00000007927) #13 FGFRL1 (ENSNNAG00000007904) ATOH8 (ENSNNAG00000007882) ST3GAL5 (ENSNNAG00000007849) SLC25A30 (ENSNNAG00000007807) TPT1 (ENSNNAG00000007771) KCTD4 (ENSNNAG00000007740) GTF2F2 (ENSNNAG00000007652) Elapidae_a ANCESTRAL SPECIES 102 ENSGT00730000111333 ENSGT00940000159008 ENSGT00940000158057 ENSGT00390000014056 ENSGT01000000218120 ENSGT00940000158274 ENSGT00500000044923 ENSGT00950000182937.A.a ENSGT00390000015682 ENSGT00940000160120 ENSGT00950000182932.B #27 ENSGT00390000013043 #26 ENSGT00390000005342 #25 ENSGT00940000157429 #24 ENSGT00950000183167.b ##23 ENSGT00940000159880 #22 ENSGT00940000158858 #21 ENSGT00390000008738.s #19 ENSGT00940000162861 #17 ENSGT00940000164256 ENSGT00940000153203.B #15 ENSGT00940000157061.a.j #14 ENSGT00940000156736 Blue-lipped sea krait MODERN SPECIES 2757 FGFR3 (ENSLLTG00000002445) #22 Acanthophiinae ANCESTRAL SPECIES 93 ENSGT00730000111333 ENSGT00940000159008 ENSGT00940000158057 ENSGT00390000014056 ENSGT01000000218120 ENSGT00940000158274 ENSGT00500000044923 ENSGT00950000182937.A.a ENSGT00390000015682 ENSGT00940000160120 ENSGT00950000182932.B #27 ENSGT00390000013043 #26 ENSGT00390000005342 #25 ENSGT00940000157429 #24 ENSGT00950000183167.b ##23 ENSGT00940000159880 #22 ENSGT00900000142191 ENSGT00390000008738.s #19 ENSGT00940000162861 #17 ENSGT00940000164256 ENSGT00940000153203.B #15 ENSGT00940000157061.a.j #14 ENSGT00940000156736 Eastern brown snake MODERN SPECIES 138 VSTM4 (ENSPTXG00000018008) ENSPTXG00000018005 ERCC6 (ENSPTXG00000017998) CXCL12 (ENSPTXG00000017995) ENSPTXG00000017994 PAOX (ENSPTXG00000017982) MTG1 (ENSPTXG00000017965) CHUK (ENSPTXG00000017961) COG3 (ENSPTXG00000017932) MXD4 (ENSPTXG00000017927) NAT8L (ENSPTXG00000017926) #27 C4orf48 (ENSPTXG00000017925) #26 NELFA (ENSPTXG00000017922) #25 NSD2 (ENSPTXG00000017893) #24 ENSPTXG00000017891 ##23 FGFR3 (ENSPTXG00000011013) #22 ENSPTXG00000010968 SLBP (ENSPTXG00000010967) #19 NKX1-1 (ENSPTXG00000010966) #17 ENSPTXG00000010965 MAEA (ENSPTXG00000010964) #15 CTBP1 (ENSPTXG00000010963) #14 Mainland tiger snake MODERN SPECIES 643 FGFR3 (ENSNSUG00000008294) #22 ENSNSUG00000008289 SLBP (ENSNSUG00000008288) #19 Anura ANCESTRAL SPECIES 2 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00390000005342 #25 ENSGT00390000013043 #26 ENSGT00950000182932.B #27 ENSGT00940000159015 #28 ENSGT00390000011904 ENSGT00940000157217 ENSGT00500000045231 ENSGT00390000010318 ENSGT00390000000973.a.b ENSGT00510000046908.a.b ENSGT00390000002216 ENSGT00940000158581 ENSGT00830000128422 Frog MODERN SPECIES ENSXETG00000039689 fgfrl1 (ENSXETG00000021042) ENSXETG00000042708 RNF212 (ENSXETG00000041996) gp25l (ENSXETG00000032430) spon2 (ENSXETG00000021044) #13 ctbp1 (ENSXETG00000021047) #14 maea (ENSXETG00000010676) #15 ENSXETG00000043260 uvssa (ENSXETG00000010677) nkx1-1 (ENSXETG00000003881) #17 fam53a (ENSXETG00000003878) #18 slbp (ENSXETG00000003876) #19 tmem129 (ENSXETG00000003875) #20 tacc3 (ENSXETG00000003874) #21 fgfr3 (ENSXETG00000002396) #22 letm1 (ENSXETG00000032769) ##23 nsd2 (ENSXETG00000026376) #24 nelfa (ENSXETG00000002392) #25 c4orf48 (ENSXETG00000046848) #26 XB5729271 [provisional] (ENSXETG00000026378) C4orf48 (ENSXETG00000046317) #26 poln (ENSXETG00000002388) #28 ENSXETG00000047057 nat8l (ENSXETG00000002389) #27 ENSXETG00000044442 mxd4 (ENSXETG00000047414) ENSXETG00000047339 ENSXETG00000047512 zfyve28 (ENSXETG00000020484) ENSXETG00000044048 Leishan spiny toad MODERN SPECIES ENSLLEG00000003749 RNF212 (ENSLLEG00000003740) ENSLLEG00000003735 SPON2 (ENSLLEG00000003729) #13 CTBP1 (ENSLLEG00000003680) #14 MAEA (ENSLLEG00000003566) #15 ENSLLEG00000003532 ENSLLEG00000003528 ENSLLEG00000003505 NKX1-1 (ENSLLEG00000003496) #17 ENSLLEG00000003490 FAM53A (ENSLLEG00000003474) #18 ENSLLEG00000003454 #19 TMEM129 (ENSLLEG00000003431) #20 TACC3 (ENSLLEG00000003394) #21 FGFR3 (ENSLLEG00000003130) #22 ENSLLEG00000003019 ##23 ENSLLEG00000002999 NSD2 (ENSLLEG00000002834) #24 NELFA (ENSLLEG00000002756) #25 ENSLLEG00000002737 #26 C4orf48 (ENSLLEG00000002725) #26 NAT8L (ENSLLEG00000002715) #27 POLN (ENSLLEG00000002648) #28 HAUS3 (ENSLLEG00000002622) ENSLLEG00000002583 ENSLLEG00000002562 ZFYVE28 (ENSLLEG00000002472) CFAP99 (ENSLLEG00000002429) ENSLLEG00000002418 RNF4 (ENSLLEG00000002390) Coelacanth MODERN SPECIES 2314 FGFR3 (ENSLACG00000000568) #22 ENSLACG00000007954 ##23 Actinopterygii ANCESTRAL SPECIES 64 ENSGT00940000159795 ENSGT00920000149123.d ENSGT00940000156736 ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 #13 ENSGT00940000157061.a #14 ENSGT00940000153203.B #15 ENSGT00940000164256 ENSGT00940000162861 #17 ENSGT00530000063371.A #18 ENSGT00390000009871 ENSGT00390000008738 #19 ENSGT00390000013284 #20 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.b ##23 ENSGT00940000157429 #24 ENSGT00730000111999 ENSGT00390000010318 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000160120 ENSGT00950000182810.B.b ENSGT00390000011904 ENSGT00940000159015 #28 ENSGT00950000182932.B.b #27 ENSGT00390000013043 #26 ENSGT00390000005342 #25 Neopterygii ANCESTRAL SPECIES 369 ENSGT00940000158858 #21 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00730000111999 ENSGT00390000010318 ENSGT00500000045231 ENSGT00940000157217 Osteoglossocephalai ANCESTRAL SPECIES 1182 ENSGT00940000159880 #22 ENSGT00940000157429 #24 Clupeocephala ANCESTRAL SPECIES 196 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 95 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165600 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 Clupeiformes ANCESTRAL SPECIES 23 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00940000154782.d ENSGT00940000157417 ENSGT00390000017666 ENSGT00940000161472 ENSGT00940000158243 ENSGT00940000157547 ENSGT00940000164834.a ENSGT00950000182963.a.a ENSGT00940000154607.a ENSGT00510000048137 ENSGT00940000162505.b ENSGT01100000263595 ENSGT00590000083139.c Denticle herring MODERN SPECIES sfxn5a (ENSDCDG00000030663) emx1 (ENSDCDG00000030661) noto (ENSDCDG00000030660) ENSDCDG00000030657 ap5s1 (ENSDCDG00000030656) ENSDCDG00000030654 gfra4a (ENSDCDG00000030651) ATRN (ENSDCDG00000030198) EIF2AK3 (ENSDCDG00000030077) rpia (ENSDCDG00000030063) slc4a11 (ENSDCDG00000030019) ENSDCDG00000029993 dnaaf9 (ENSDCDG00000029981) cfd (ENSDCDG00000029974) foxi2 (ENSDCDG00000029972) fgfr3 (ENSDCDG00000016838) #22 letm1 (ENSDCDG00000016134) ##23 nsd2 (ENSDCDG00000016105) #24 lgmn (ENSDCDG00000014882) PCNX1 (ENSDCDG00000014737) med6 (ENSDCDG00000014654) TTC9 (ENSDCDG00000014648) MAP3K9 (ENSDCDG00000014642) slc8a3 (ENSDCDG00000014628) ENSDCDG00000014624 NHSL1 (ENSDCDG00000014616) ENSDCDG00000014605 ENSDCDG00000014601 ENSDCDG00000014597 ccdc28a (ENSDCDG00000014594) ENSDCDG00000014592 Atlantic herring MODERN SPECIES 5 CDC25B (ENSCHAG00000013411) ap5s1 (ENSCHAG00000013433) gfra4a (ENSCHAG00000013439) ATRN (ENSCHAG00000013495) ENSCHAG00000015974 ENSCHAG00000015989 ATRN (ENSCHAG00000015998) ENSCHAG00000016280 rpia (ENSCHAG00000017356) slc4a11 (ENSCHAG00000017790) ENSCHAG00000017944 ENSCHAG00000017957 ENSCHAG00000017975 cfd (ENSCHAG00000018050) foxi2 (ENSCHAG00000018055) fgfr3 (ENSCHAG00000018255) #22 letm1 (ENSCHAG00000022579) ##23 nsd2 (ENSCHAG00000022726) #24 lgmn (ENSCHAG00000022859) PCNX1 (ENSCHAG00000022920) med6 (ENSCHAG00000023014) mrpl9 (ENSCHAG00000023029) TTC9 (ENSCHAG00000023039) MAP3K9 (ENSCHAG00000023050) slc8a3 (ENSCHAG00000023168) ENSCHAG00000023170 NHSL1 (ENSCHAG00000023180) ENSCHAG00000023233 SH3YL1 (ENSCHAG00000023242) alkal2b (ENSCHAG00000023252) ENSCHAG00000023264 Otophysi ANCESTRAL SPECIES 29 ENSGT00940000158783.a.a ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00640000091487 ENSGT00390000005644 ENSGT00940000156665.b ENSGT00940000154194.c.b ENSGT00940000154340.A ENSGT00940000164529 ENSGT00940000158205 ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00390000013159 ENSGT00910000144274 ENSGT00940000156728 Characiphysae ANCESTRAL SPECIES 13 ENSGT00940000158783.a.a ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121.g ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00640000091487.n ENSGT00390000005644 ENSGT00940000156665.b ENSGT00940000154194.c.b ENSGT00940000154340.A ENSGT00940000164529 ENSGT00940000158205 ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00390000013159 ENSGT00910000144274 ENSGT00940000156728 Channel catfish MODERN SPECIES 22 ENSIPUG00000006171 sfxn5a (ENSIPUG00000006189) emx1 (ENSIPUG00000006240) noto (ENSIPUG00000006256) cdc25b (ENSIPUG00000006277) ap5s1 (ENSIPUG00000006335) gfra4 (ENSIPUG00000006347) atrn (ENSIPUG00000006366) EIF2AK3 (ENSIPUG00000006562) RPIA (ENSIPUG00000006637) slc4a11 (ENSIPUG00000006703) ENSIPUG00000006829 c3h20orf194 (ENSIPUG00000006847) cfd (ENSIPUG00000006895) foxi3 (ENSIPUG00000006943) fgfr3 (ENSIPUG00000006963) #22 letm1 (ENSIPUG00000007104) ##23 Whsc1 (ENSIPUG00000007142) #24 kiaa1109 (ENSIPUG00000007197) ENSIPUG00000007285 ENSIPUG00000007322 c3h9orf72 (ENSIPUG00000007366) lingo2 (ENSIPUG00000007386) eif4eb (ENSIPUG00000007404) fam241a (ENSIPUG00000007430) adh8a (ENSIPUG00000007448) metap1 (ENSIPUG00000007488) enpep (ENSIPUG00000007543) rrh (ENSIPUG00000007616) lamtor3 (ENSIPUG00000007638) dapp1 (ENSIPUG00000007728) Characiphysae_b ANCESTRAL SPECIES 10 ENSGT00940000158783.a.a ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121.g ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00640000091487.n ENSGT00390000005644 ENSGT00940000156665.b ENSGT00940000154194.c.b ENSGT00940000154340.A ENSGT00940000164529 ENSGT00940000158205 ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00390000013159 ENSGT00910000144274 ENSGT00940000156728 Characoidei ANCESTRAL SPECIES 5 ENSGT00940000158783.a.a ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121.g ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596.c ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00640000091487.n ENSGT00390000005644 ENSGT00940000156665.b ENSGT00940000154194.c.b ENSGT00940000154340.A ENSGT00940000164529 ENSGT00940000158205 ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00390000013159 ENSGT00910000144274 ENSGT00940000156728.r Red-bellied piranha MODERN SPECIES 15 ENSPNAG00000016935 ap5s1 (ENSPNAG00000016885) gfra4a (ENSPNAG00000016876) ATRN (ENSPNAG00000016846) EIF2AK3 (ENSPNAG00000016647) rpia (ENSPNAG00000004760) slc4a11 (ENSPNAG00000016559) ENSPNAG00000005139 dnaaf9 (ENSPNAG00000016454) cfd (ENSPNAG00000016324) foxi2 (ENSPNAG00000016257) fgfr3 (ENSPNAG00000016220) #22 letm1 (ENSPNAG00000016131) ##23 nsd2 (ENSPNAG00000016100) #24 kiaa1109 (ENSPNAG00000015880) zgc:100846 (ENSPNAG00000015616) lingo2b (ENSPNAG00000015595) eif4eb (ENSPNAG00000015574) adh8a (ENSPNAG00000015259) metap1 (ENSPNAG00000015240) lrit3b (ENSPNAG00000015144) enpep (ENSPNAG00000015117) rrh (ENSPNAG00000006418) lamtor3 (ENSPNAG00000015044) dapp1 (ENSPNAG00000015025) atp10d (ENSPNAG00000015013) ENSPNAG00000014994 Mexicana tetra MODERN SPECIES 17 ENSAMXG00000043632 akt3a (ENSAMXG00000003004) zbtb18 (ENSAMXG00000042119) adss2 (ENSAMXG00000002991) desi2 (ENSAMXG00000029271) gfra4a (ENSAMXG00000008284) ATRN (ENSAMXG00000012199) EIF2AK3 (ENSAMXG00000002628) rpia (ENSAMXG00000030591) slc4a11 (ENSAMXG00000012299) ENSAMXG00000012313 dnaaf9 (ENSAMXG00000012330) cfd (ENSAMXG00000038575) foxi2 (ENSAMXG00000039729) ENSAMXG00000037452 fgfr3 (ENSAMXG00000012387) #22 letm1 (ENSAMXG00000012451) ##23 nsd2 (ENSAMXG00000012476) #24 ENSAMXG00000029109 ENSAMXG00000030812 kiaa1109 (ENSAMXG00000012505) ENSAMXG00000037749 PLAAT4 (ENSAMXG00000017456) ENSAMXG00000017474 zgc:100846 (ENSAMXG00000017485) lingo2b (ENSAMXG00000038637) eif4eb (ENSAMXG00000041156) fam241a (ENSAMXG00000031374) ENSAMXG00000017535 ENSAMXG00000017546 ENSAMXG00000035262 Electric eel MODERN SPECIES 761 fgfr3 (ENSEEEG00000021684) #22 letm1 (ENSEEEG00000021641) ##23 ENSEEEG00000021633 #24 nsd2 (ENSEEEG00000021631) #24 kiaa1109 (ENSEEEG00000021629) ENSEEEG00000021625 ENSEEEG00000021623 ENSEEEG00000021610 zgc:100846 (ENSEEEG00000021607) lingo2b (ENSEEEG00000021606) eif4eb (ENSEEEG00000021599) fam241a (ENSEEEG00000021596) adh8a (ENSEEEG00000021544) Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00950000184013 ENSGT01030000234518.A.a.a ENSGT00940000158783.a.a ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000168737 ENSGT00940000166929 ENSGT00940000159880.a #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00640000091487 ENSGT00390000005644 ENSGT00940000156665.b ENSGT00940000154194.c.b ENSGT00940000154340.A ENSGT00940000164529 ENSGT00940000158205 ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00390000013159 ENSGT00910000144274 ENSGT00940000156728 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 96 ENSGT00940000158783.a.a.j ENSGT01030000234641.a.a.b.b ENSGT00940000161476.p ENSGT00940000154361.B.c ENSGT00940000158524.t ENSGT00390000013178.d ENSGT00940000160491.d.a.a ENSGT00940000157346.i ENSGT00940000158121.e ENSGT00390000004352.r ENSGT00940000154894.b.d ENSGT00940000165596.c.b ENSGT00390000003692.a ENSGT00940000162255.b ENSGT00940000166929.d ENSGT00940000159880.a.a #22 ENSGT00950000183167.a.a.c ##23 ENSGT00940000157429.h #24 ENSGT00640000091487.l ENSGT00390000005644.k ENSGT00940000156665.b.f ENSGT00940000154194.c.b.c ENSGT00940000154340.A.k ENSGT00940000164529.g.b ENSGT00940000158205.q ENSGT00940000156627.b ENSGT00940000156946.h ENSGT01100000263524.I.i Goldfish MODERN SPECIES 31 ENSCARG00000030607 ENSCARG00000030617 emx1 (ENSCARG00000030627) noto (ENSCARG00000030643) CDC25B (ENSCARG00000030662) ap5s1 (ENSCARG00000030696) gfra4a (ENSCARG00000030701) ATRN (ENSCARG00000030751) EIF2AK3 (ENSCARG00000031141) rpia (ENSCARG00000032601) slc4a11 (ENSCARG00000033147) ENSCARG00000033507 dnaaf9 (ENSCARG00000033649) cfd (ENSCARG00000035287) foxi2 (ENSCARG00000035293) fgfr3 (ENSCARG00000035328) #22 letm1 (ENSCARG00000036878) ##23 nsd2 (ENSCARG00000037434) #24 kiaa1109 (ENSCARG00000038130) zgc:100846 (ENSCARG00000038516) lingo2b (ENSCARG00000038560) eif4eb (ENSCARG00000038570) fam241a (ENSCARG00000038603) ENSCARG00000038622 metap1 (ENSCARG00000038822) enpep (ENSCARG00000038961) rrh (ENSCARG00000039603) lamtor3 (ENSCARG00000039661) dapp1 (ENSCARG00000039819) atp10d (ENSCARG00000006081) commd8 (ENSCARG00000006224) Cyprininae_a ANCESTRAL SPECIES 32 ENSGT00940000158783.a.a.j ENSGT01030000234641.a.a.b.b ENSGT00940000161476.p ENSGT00940000154361.B.c ENSGT00940000158524.t ENSGT00390000013178.d ENSGT00940000160491.d.a.a ENSGT00940000157346.i ENSGT00940000158121.e ENSGT00390000004352.r ENSGT00940000154894.b.d ENSGT00940000165596.c.b ENSGT00390000003692.a ENSGT00940000162255.b ENSGT00940000166929.d ENSGT00940000159880.a.a #22 ENSGT00950000183167.a.a.c ##23 ENSGT00940000157429.h #24 ENSGT00640000091487.l ENSGT00390000005644.k ENSGT00940000156665.b.f ENSGT00940000154194.c.b.c ENSGT00940000154340.A.k ENSGT00940000164529.g.a ENSGT00940000164529.g.b ENSGT00940000158205.q ENSGT00940000156627.b ENSGT00940000156946.h ENSGT01100000263524.I.i ENSGT00390000013159.a ENSGT00910000144274.c Common carp reference MODERN SPECIES 48 ENSCCRG00000035207 sfxn5a (ENSCCRG00000077564) emx1 (ENSCCRG00000044476) ENSCCRG00000061568 noto (ENSCCRG00000080044) ap5s1 (ENSCCRG00000044491) gfra4a (ENSCCRG00000070363) ENSCCRG00000006645 ENSCCRG00000060516 rpia (ENSCCRG00000082334) slc4a11 (ENSCCRG00000044947) ENSCCRG00000030230 dnaaf9 (ENSCCRG00000029209) cfd (ENSCCRG00000066003) foxi2 (ENSCCRG00000068553) fgfr3 (ENSCCRG00000016440) #22 letm1 (ENSCCRG00000046655) ##23 nsd2 (ENSCCRG00000031982) #24 kiaa1109 (ENSCCRG00000031958) zgc:100846 (ENSCCRG00000018346) lingo2b (ENSCCRG00000057120) fam241a (ENSCCRG00000054530) eif4eb (ENSCCRG00000050652) ENSCCRG00000063309 ENSCCRG00000053793 ENSCCRG00000075798 ENSCCRG00000082806 metap1 (ENSCCRG00000054277) lrit3b (ENSCCRG00000018379) enpep (ENSCCRG00000018380) rrh (ENSCCRG00000066844) Golden-line barbel MODERN SPECIES 582 gfra4a (ENSSGRG00000042145) ATRN (ENSSGRG00000042156) ENSSGRG00000042442 rpia (ENSSGRG00000042444) slc4a11 (ENSSGRG00000042497) ENSSGRG00000042514 dnaaf9 (ENSSGRG00000042515) cfd (ENSSGRG00000042516) foxi2 (ENSSGRG00000042517) fgfr3 (ENSSGRG00000042628) #22 letm1 (ENSSGRG00000048192) ##23 nsd2 (ENSSGRG00000048195) #24 kiaa1109 (ENSSGRG00000048357) zgc:100846 (ENSSGRG00000048368) lingo2b (ENSSGRG00000048453) eif4eb (ENSSGRG00000048454) fam241a (ENSSGRG00000048456) ENSSGRG00000048459 metap1 (ENSSGRG00000048518) lrit3b (ENSSGRG00000048928) enpep (ENSSGRG00000048929) rrh (ENSSGRG00000048933) rrh (ENSSGRG00000048936) dapp1 (ENSSGRG00000048939) lamtor3 (ENSSGRG00000048943) Cyprininae ANCESTRAL SPECIES 62 ENSGT01040000240375.D.i.a ENSGT00940000160491.d.a.b ENSGT00940000157346.j ENSGT00940000158121.f ENSGT00390000004352.q ENSGT00940000154894.b.c ENSGT00940000165596.c.a ENSGT00390000003692.b ENSGT00940000162255.a ENSGT00940000166929.c ENSGT00940000159880.a.b #22 ENSGT00950000183167.a.a.d ##23 ENSGT00940000157429.g #24 ENSGT00640000091487.k ENSGT00390000005644.l ENSGT00940000156665.b.e ENSGT00940000154194.c.b.d ENSGT00940000154340.A.l ENSGT00940000164529.h ENSGT00940000158205.r ENSGT00940000156946.g ENSGT01100000263524.I.j ENSGT00390000013159.a ENSGT00910000144274.c ENSGT00940000156728.t ENSGT00390000018121 Goldfish MODERN SPECIES 4 ENSCARG00000016455 pxylp1 (ENSCARG00000016445) SLC25A36 (ENSCARG00000016421) ENSCARG00000016398 ENSCARG00000016385 spsb4b (ENSCARG00000016379) CLSTN2 (ENSCARG00000016313) ENSCARG00000016306 ENSCARG00000016299 ENSCARG00000016295 ENSCARG00000016289 ENSCARG00000016285 dnaaf9 (ENSCARG00000016094) cfd (ENSCARG00000016075) foxi2 (ENSCARG00000016066) fgfr3 (ENSCARG00000013122) #22 ENSCARG00000012970 letm1 (ENSCARG00000011981) ##23 nsd2 (ENSCARG00000010915) #24 kiaa1109 (ENSCARG00000010221) zgc:100846 (ENSCARG00000010145) lingo2b (ENSCARG00000010139) eif4eb (ENSCARG00000010124) fam241a (ENSCARG00000010120) ENSCARG00000010080 ENSCARG00000032385 metap1 (ENSCARG00000032342) enpep (ENSCARG00000030668) rrh (ENSCARG00000030573) lamtor3 (ENSCARG00000030479) dapp1 (ENSCARG00000030424) Cyprininae_a ANCESTRAL SPECIES 171 ENSGT00940000160491.d.a.b ENSGT00940000157346.j ENSGT00940000158121.f ENSGT00390000004352.q ENSGT00940000154894.b.c ENSGT00940000165596.c.a ENSGT00390000003692.b ENSGT00940000162255.a ENSGT00940000166929.c ENSGT00940000159880.a.b #22 ENSGT00950000183167.a.a.d ##23 ENSGT00940000157429.g #24 ENSGT00640000091487.k ENSGT00390000005644.l ENSGT00940000156665.b.e ENSGT00940000154194.c.b.d ENSGT00940000154340.A.l ENSGT00940000164529.h ENSGT00940000158205.r ENSGT00940000156946.g ENSGT01100000263524.I.j ENSGT00390000013159.b ENSGT00910000144274.d ENSGT00940000156728.s ENSGT00940000157895.s Common carp reference MODERN SPECIES 18 sfxn5a (ENSCCRG00000044500) emx1 (ENSCCRG00000068921) noto (ENSCCRG00000044498) ENSCCRG00000044458 ap5s1 (ENSCCRG00000044452) ENSCCRG00000060030 gfra4a (ENSCCRG00000082232) ENSCCRG00000045020 ENSCCRG00000041431 rpia (ENSCCRG00000061199) slc4a11 (ENSCCRG00000044915) ENSCCRG00000015549 dnaaf9 (ENSCCRG00000015540) cfd (ENSCCRG00000029196) foxi2 (ENSCCRG00000072720) fgfr3 (ENSCCRG00000058736) #22 letm1 (ENSCCRG00000053607) ##23 nsd2 (ENSCCRG00000046693) #24 ENSCCRG00000019550 kiaa1109 (ENSCCRG00000047441) ENSCCRG00000050644 zgc:100846 (ENSCCRG00000050650) lingo2b (ENSCCRG00000069695) fam241a (ENSCCRG00000065668) eif4eb (ENSCCRG00000078755) ENSCCRG00000054578 metap1 (ENSCCRG00000070654) enpep (ENSCCRG00000051627) rrh (ENSCCRG00000018382) lamtor3 (ENSCCRG00000051622) dapp1 (ENSCCRG00000051590) Golden-line barbel MODERN SPECIES 67 foxi2 (ENSSGRG00000014179) fgfr3 (ENSSGRG00000014249) #22 letm1 (ENSSGRG00000019694) ##23 nsd2 (ENSSGRG00000020182) #24 kiaa1109 (ENSSGRG00000020841) zgc:100846 (ENSSGRG00000021003) lingo2b (ENSSGRG00000021056) eif4eb (ENSSGRG00000021059) fam241a (ENSSGRG00000021065) ENSSGRG00000021083 ENSSGRG00000021212 metap1 (ENSSGRG00000021213) enpep (ENSSGRG00000021359) rrh (ENSSGRG00000021362) lamtor3 (ENSSGRG00000021395) dapp1 (ENSSGRG00000021368) atp10d (ENSSGRG00000021423) Zebrafish MODERN SPECIES 4 emx1 (ENSDARG00000039569) noto (ENSDARG00000021201) cdc25b (ENSDARG00000010792) ap5s1 (ENSDARG00000076755) gfra4a (ENSDARG00000056651) atrn (ENSDARG00000062164) EIF2AK3 (ENSDARG00000062139) rpia (ENSDARG00000056640) slc4a11 (ENSDARG00000075532) ENSDARG00000074036 dnaaf9 (ENSDARG00000079056) cfd (ENSDARG00000039579) ENSDARG00000056616 ENSDARG00000056598 foxi2 (ENSDARG00000069715) fgfr3 (ENSDARG00000004782) #22 letm1 (ENSDARG00000056978) ##23 nsd2 (ENSDARG00000026225) #24 kiaa1109 (ENSDARG00000062330) C13H9orf72 (ENSDARG00000011837) lingo2b (ENSDARG00000069970) eif4eb (ENSDARG00000013274) fam241a (ENSDARG00000057006) adh8a (ENSDARG00000091211) adh8b (ENSDARG00000024278) metap1 (ENSDARG00000033440) lrit3b (ENSDARG00000057054) enpep (ENSDARG00000057064) rrh (ENSDARG00000039534) si:dkey-20i10.7 (ENSDARG00000075269) lamtor3 (ENSDARG00000057075) Otomorpha ANCESTRAL SPECIES ENSGT00940000159880.b #22 Otophysi ANCESTRAL SPECIES ENSGT00940000159880.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000159880.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000159880.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000159880.b #22 Common carp reference MODERN SPECIES 35 GRXCR1 (ENSCCRG00000047460) slc30a9 (ENSCCRG00000045705) zgc:195212 (ENSCCRG00000002082) grhpra (ENSCCRG00000053276) ENSCCRG00000064655 gar1 (ENSCCRG00000063304) adh5 (ENSCCRG00000078416) eif4ea (ENSCCRG00000050308) adra1bb (ENSCCRG00000050301) ENSCCRG00000067193 pcdh10b (ENSCCRG00000066502) ENSCCRG00000075886 pcdh18b (ENSCCRG00000057920) ENSCCRG00000054707 ENSCCRG00000048852 ENSCCRG00000072985 #22 nitr13 (ENSCCRG00000058341) ENSCCRG00000048630 ENSCCRG00000053279 chrnb3b (ENSCCRG00000075212) ENSCCRG00000070027 tspan7 (ENSCCRG00000082814) mid1ip1l (ENSCCRG00000064546) ENSCCRG00000048570 cstf2 (ENSCCRG00000048547) nox1 (ENSCCRG00000048201) xkrx (ENSCCRG00000043208) arl13a (ENSCCRG00000043199) tmem35 (ENSCCRG00000077271) CENPI (ENSCCRG00000001964) drp2 (ENSCCRG00000078233) Goldfish MODERN SPECIES 2347 pcdh18b (ENSCARG00000038614) ENSCARG00000036166 ENSCARG00000036048 ENSCARG00000036024 #22 ENSCARG00000036010 nitr13 (ENSCARG00000036000) ITGA6 (ENSCARG00000035981) chrnb3b (ENSCARG00000035937) ENSCARG00000035921 tspan7 (ENSCARG00000035892) mid1ip1l (ENSCARG00000035880) ENSCARG00000035875 ENSCARG00000035863 cstf2 (ENSCARG00000035787) nox1 (ENSCARG00000035441) xkrx (ENSCARG00000045461) arl13a (ENSCARG00000045433) tmem35 (ENSCARG00000045412) CENPI (ENSCARG00000045215) Clupeiformes ANCESTRAL SPECIES ENSGT00940000159880.b #22 Atlantic herring MODERN SPECIES 12 ENSCHAG00000008818 ENSCHAG00000008853 ENSCHAG00000008883 ENSCHAG00000008896 ENSCHAG00000008903 ENSCHAG00000008929 ENSCHAG00000008950 ENSCHAG00000008977 ENSCHAG00000009005 ENSCHAG00000009039 hspa9 (ENSCHAG00000009126) rnf4 (ENSCHAG00000011674) ENSCHAG00000011694 #22 ENSCHAG00000011701 spon2b (ENSCHAG00000011706) #13 zgc:136929 (ENSCHAG00000011734) #14 BRCC3 (ENSCHAG00000012002) maea (ENSCHAG00000012183) #15 uvssa (ENSCHAG00000012252) nkx1.2lb (ENSCHAG00000012264) #17 ENSCHAG00000012281 ENSCHAG00000012296 ENSCHAG00000012311 ENSCHAG00000012362 ENSCHAG00000012390 ENSCHAG00000012410 rnf111 (ENSCHAG00000012427) ccnb2 (ENSCHAG00000012731) Euteleosteomorpha ANCESTRAL SPECIES 19 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 Protacanthopterygii ANCESTRAL SPECIES 68 ENSGT00990000206238 ENSGT01030000234518.A.a.a ENSGT00940000158783.a.a ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00390000003692 ENSGT00940000162255 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 2084 ENSGT00940000159880.c #22 ENSGT00940000157429.c.b #24 Salmoninae_a ANCESTRAL SPECIES 957 ENSGT00940000159880.c #22 ENSGT00940000157429.c.b #24 Salmo ANCESTRAL SPECIES 8 ENSGT00940000159880.c #22 ENSGT00940000157429.c.b #24 ENSGT00940000158247.c ENSGT00940000159744.g ENSGT00940000166929.a ENSGT00940000162255 ENSGT00940000154894.b ENSGT00390000004352.s.b ENSGT00940000157346.g.a.b.b.a ENSGT00940000160491.d.a.e.b ENSGT00940000158524.p ENSGT00940000154361.B.i.a ENSGT00940000161476.r ENSGT00940000158783.a.a ENSGT00990000206238.a ENSGT00940000158157.e.a.b River trout MODERN SPECIES 193 fgfr3 (ENSSTUG00000023361) #22 ENSSTUG00000038249 nsd2 (ENSSTUG00000038261) #24 jade1 (ENSSTUG00000038412) pgrmc2 (ENSSTUG00000038428) foxi2 (ENSSTUG00000038440) Atlantic salmon MODERN SPECIES ENSSSAG00000117299 ENSSSAG00000083690 ENSSSAG00000093490 EXD2 (ENSSSAG00000106653) ENSSSAG00000102505 ENSSSAG00000084748 ENSSSAG00000115259 GALNT16 (ENSSSAG00000105031) ENSSSAG00000116341 ENSSSAG00000083603 ENSSSAG00000063299 ENSSSAG00000000059 ENSSSAG00000105589 ENSSSAG00000107445 ENSSSAG00000121530 ENSSSAG00000062885 #22 ENSSSAG00000082060 ENSSSAG00000000040 #24 ENSSSAG00000000048 ENSSSAG00000086702 ENSSSAG00000119872 ENSSSAG00000000041 cfd (ENSSSAG00000001017) ENSSSAG00000114841 ENSSSAG00000063772 rpia (ENSSSAG00000044034) ENSSSAG00000096526 ENSSSAG00000110898 ENSSSAG00000000044 ENSSSAG00000082077 rpia (ENSSSAG00000090551) Salmoninae ANCESTRAL SPECIES 211 ENSGT00390000008453 ENSGT00940000158157.e.b.a ENSGT00940000157626 ENSGT00990000206238.b ENSGT01030000234518.A.a.a ENSGT00940000161476.q ENSGT00940000154361.B.i.b ENSGT00940000158524.o ENSGT00970000197325 ENSGT00390000013178 ENSGT00940000160491.d.a.e.a ENSGT00940000157346.h ENSGT00940000158121 ENSGT00390000004352.s.a ENSGT00940000166929.b ENSGT00940000159880.d #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.c.a #24 Huchen MODERN SPECIES 5700 fgfr3 (ENSHHUG00000031479) #22 Salmoninae_a ANCESTRAL SPECIES 62 ENSGT00940000158157.e.a.a ENSGT00940000157626 ENSGT00990000206238.b ENSGT01030000234518.A.a.a ENSGT00940000161476.q ENSGT00940000154361.B.i.b ENSGT00940000158524.o ENSGT00390000013178 ENSGT00940000160491.d.a.e.a ENSGT00940000157346.h ENSGT00940000158121 ENSGT00390000004352.s.a ENSGT00390000004352.t ENSGT00390000003692 ENSGT00940000166929.b ENSGT00940000159880.d #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.c.a #24 Oncorhynchus ANCESTRAL SPECIES 35 ENSGT00940000158157.e.b.a ENSGT00940000157626 ENSGT00990000206238.b ENSGT01030000234518.A.a.a ENSGT00940000161476.q ENSGT00940000154361.B.i.b ENSGT00940000158524.o ENSGT00390000013178 ENSGT00940000160491.d.a.e.a ENSGT00940000157346.h ENSGT00940000158121 ENSGT00390000004352.s.a ENSGT00390000004352.t ENSGT00390000003692 ENSGT00940000166929.b ENSGT00940000159880.d #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.c.a #24 ENSGT00940000158247.d Oncorhynchus_a ANCESTRAL SPECIES 102 ENSGT00390000008453 ENSGT00940000158157.e.b.a ENSGT00940000157626 ENSGT00990000206238.b ENSGT01030000234518.A.a.a ENSGT00940000161476.q ENSGT00940000154361.B.i.b ENSGT00940000158524.o ENSGT00390000013178 ENSGT00940000160491.d.a.e.a ENSGT00940000157346.h ENSGT00940000158121 ENSGT00390000004352.s.a ENSGT00390000003692 ENSGT00940000166929.b ENSGT00940000159880.d #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.c.a #24 ENSGT00940000158247.d ENSGT00940000166228.a.b Coho salmon MODERN SPECIES 5 ENSOKIG00005031000 ENSOKIG00005030945 ENSOKIG00005030928 ENSOKIG00005030918 emx1 (ENSOKIG00005030905) noto (ENSOKIG00005030895) ENSOKIG00005030834 ap5s1 (ENSOKIG00005030824) gfra4a (ENSOKIG00005030770) ENSOKIG00005030744 ATRN (ENSOKIG00005030243) EIF2AK3 (ENSOKIG00005028940) rpia (ENSOKIG00005028831) dnaaf9 (ENSOKIG00005028697) foxi2 (ENSOKIG00005028613) fgfr3 (ENSOKIG00005028463) #22 ENSOKIG00005028439 letm1 (ENSOKIG00005027991) ##23 ENSOKIG00005027961 nsd2 (ENSOKIG00005027740) #24 JADE1 (ENSOKIG00005027706) asmt2 (ENSOKIG00005027674) PGRMC2 (ENSOKIG00005027637) Rainbow trout MODERN SPECIES 17 emx1 (ENSOMYG00000060924) noto (ENSOMYG00000030859) ENSOMYG00000065754 ap5s1 (ENSOMYG00000023540) ENSOMYG00000031696 gfra4a (ENSOMYG00000076250) ENSOMYG00000068837 ENSOMYG00000024162 ENSOMYG00000061808 ENSOMYG00000023975 ENSOMYG00000061409 ENSOMYG00000048028 rpia (ENSOMYG00000023915) dnaaf9 (ENSOMYG00000074713) foxi2 (ENSOMYG00000064093) fgfr3 (ENSOMYG00000064424) #22 ENSOMYG00000049397 ENSOMYG00000024144 ENSOMYG00000068644 letm1 (ENSOMYG00000037375) ##23 ENSOMYG00000060232 nsd2 (ENSOMYG00000062514) #24 ENSOMYG00000037385 ENSOMYG00000023763 ENSOMYG00000037397 ENSOMYG00000075374 ENSOMYG00000064411 pgmrc2 (ENSOMYG00000037409) Salmo ANCESTRAL SPECIES 104 ENSGT00940000170259 ENSGT00390000008453 ENSGT00940000158157.e.a.a ENSGT00940000157626 ENSGT00990000206238.b ENSGT01030000234518.A.a.a ENSGT00940000161476.q ENSGT00940000154361.B.i.b ENSGT00940000158524.o ENSGT00390000013178 ENSGT00940000157346.h ENSGT00940000158121 ENSGT00390000004352.t ENSGT00390000003692 ENSGT00940000166929.b ENSGT00940000159880.d #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.c.a #24 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000119182 emx1 (ENSSSAG00000118361) noto (ENSSSAG00000005262) ENSSSAG00000099273 ENSSSAG00000005251 ap5s1 (ENSSSAG00000005242) ENSSSAG00000104685 gfra4a (ENSSSAG00000066392) ENSSSAG00000122165 ENSSSAG00000118077 ENSSSAG00000044650 ENSSSAG00000089691 rpia (ENSSSAG00000091274) ENSSSAG00000042228 foxi2 (ENSSSAG00000118989) fgfr3 (ENSSSAG00000103995) #22 letm1 (ENSSSAG00000093538) ##23 ENSSSAG00000086553 ENSSSAG00000057776 nsd2 (ENSSSAG00000004746) #24 ENSSSAG00000097990 ENSSSAG00000085767 ENSSSAG00000112154 ENSSSAG00000102326 ENSSSAG00000100680 ENSSSAG00000065231 ENSSSAG00000065247 ENSSSAG00000084738 ENSSSAG00000087535 ENSSSAG00000065289 med12 (ENSSSAG00000065431) River trout MODERN SPECIES 17 ENSSTUG00000014600 emx1 (ENSSTUG00000014584) noto (ENSSTUG00000014573) ENSSTUG00000014555 ap5s1 (ENSSTUG00000014551) ENSSTUG00000014545 ENSSTUG00000014540 gfra4a (ENSSTUG00000014525) ENSSTUG00000014523 ATRN (ENSSTUG00000014160) dnaaf9 (ENSSTUG00000014095) rpia (ENSSTUG00000014050) ENSSTUG00000014043 EIF2AK3 (ENSSTUG00000012905) foxi2 (ENSSTUG00000012835) fgfr3 (ENSSTUG00000011565) #22 ENSSTUG00000011525 ENSSTUG00000011523 letm1 (ENSSTUG00000011094) ##23 nsd2 (ENSSTUG00000010963) #24 asmt2 (ENSSTUG00000010952) Northern pike MODERN SPECIES 14 ENSELUG00000001971 ap5s1 (ENSELUG00000032516) ENSELUG00000024502 ENSELUG00000029667 gfra4a (ENSELUG00000024589) ATRN (ENSELUG00000024472) EIF2AK3 (ENSELUG00000024324) rpia (ENSELUG00000024304) ENSELUG00000030932 slc4a11 (ENSELUG00000024292) ENSELUG00000024264 dnaaf9 (ENSELUG00000001538) cfd (ENSELUG00000024158) foxi2 (ENSELUG00000024124) ENSELUG00000028405 fgfr3 (ENSELUG00000026381) #22 letm1 (ENSELUG00000024036) ##23 nsd2 (ENSELUG00000023999) #24 jade1 (ENSELUG00000023986) asmt2 (ENSELUG00000001000) pgrmc2 (ENSELUG00000023793) ENSELUG00000023774 ENSELUG00000023708 ahsa1b (ENSELUG00000023703) manba (ENSELUG00000023651) ENSELUG00000023641 ENSELUG00000023590 CPXM1 (ENSELUG00000023583) wdr32 (ENSELUG00000023447) marc1 (ENSELUG00000023379) ENSELUG00000023278 Acanthomorphata ANCESTRAL SPECIES 19 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000168737 ENSGT00940000165600 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00990000210253 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b Cod MODERN SPECIES 18 ENSGMOG00000019814 ENSGMOG00000037191 ENSGMOG00000036545 ENSGMOG00000030538 ENSGMOG00000025584 ENSGMOG00000029142 ENSGMOG00000036234 ENSGMOG00000027819 ENSGMOG00000036081 ENSGMOG00000032123 ENSGMOG00000015246 ENSGMOG00000023308 ENSGMOG00000034034 ENSGMOG00000023915 ENSGMOG00000012716 fgfr3 (ENSGMOG00000003758) #22 ENSGMOG00000003799 ##23 nsd2 (ENSGMOG00000003846) #24 ENSGMOG00000020427 ENSGMOG00000005281 ENSGMOG00000030114 ENSGMOG00000005207 ENSGMOG00000005198 jade1 (ENSGMOG00000005171) ENSGMOG00000028115 ENSGMOG00000020082 ENSGMOG00000013922 ENSGMOG00000013956 ENSGMOG00000000359 ENSGMOG00000036418 ENSGMOG00000005548 Euacanthomorphacea ANCESTRAL SPECIES 11 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Pinecone sodierfish MODERN SPECIES 14 emx1 (ENSMMDG00005017010) noto (ENSMMDG00005017009) ENSMMDG00005017008 ap5s1 (ENSMMDG00005017007) ENSMMDG00005017006 ENSMMDG00005017005 gfra4a (ENSMMDG00005017001) ATRN (ENSMMDG00005016943) EIF2AK3 (ENSMMDG00005015749) rpia (ENSMMDG00005015723) slc4a11 (ENSMMDG00005015611) dnaaf9 (ENSMMDG00005015587) ENSMMDG00005015584 foxi2 (ENSMMDG00005015580) ENSMMDG00005015576 fgfr3 (ENSMMDG00005015568) #22 letm1 (ENSMMDG00005015316) ##23 nsd2 (ENSMMDG00005014727) #24 jade1 (ENSMMDG00005014709) asmt2 (ENSMMDG00005014707) pgrmc2 (ENSMMDG00005014706) ENSMMDG00005014699 ENSMMDG00005014698 ahsa1b (ENSMMDG00005014695) cdca4 (ENSMMDG00005014694) si:dkey-177p2.6 (ENSMMDG00005014693) ENSMMDG00005014691 ENSMMDG00005014688 ENSMMDG00005014686 vps29 (ENSMMDG00005014685) eif5 (ENSMMDG00005014680) Percomorphaceae ANCESTRAL SPECIES 13 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Cyprinodontiformes ANCESTRAL SPECIES 21 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Aplocheiloidei ANCESTRAL SPECIES 171 ENSGT00940000165596 ENSGT00940000168737 ENSGT00940000165600 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a Mangrove rivulus MODERN SPECIES 508 ENSKMAG00000011133 fgfr3 (ENSKMAG00000011175) #22 letm1 (ENSKMAG00000011368) ##23 nsd2 (ENSKMAG00000011430) #24 jade1 (ENSKMAG00000011484) asmt2 (ENSKMAG00000011527) pgrmc2 (ENSKMAG00000011556) ENSKMAG00000011589 ahsa1b (ENSKMAG00000011676) cdca4 (ENSKMAG00000011707) ENSKMAG00000011730 lrit3b (ENSKMAG00000011743) jkamp (ENSKMAG00000011758) fam241a (ENSKMAG00000011779) GPR135 (ENSKMAG00000011784) ENSKMAG00000011793 Turquoise killifish MODERN SPECIES 1625 ATP10D (ENSNFUG00015017611) dapp1 (ENSNFUG00015017584) lamtor3 (ENSNFUG00015017571) dio2 (ENSNFUG00015017565) ENSNFUG00015017558 nrxn3a (ENSNFUG00015015423) adck1 (ENSNFUG00015015261) alkbh1 (ENSNFUG00015015206) SLIRP (ENSNFUG00015015189) OSR1 (ENSNFUG00015015171) ENSNFUG00015015156 ATRN (ENSNFUG00015014168) foxi2 (ENSNFUG00015014042) ENSNFUG00015023131 ENSNFUG00015023129 fgfr3 (ENSNFUG00015020241) #22 ENSNFUG00015020067 ENSNFUG00015020065 NPAS3 (ENSNFUG00015020046) PRKD1 (ENSNFUG00015019141) foxg1a (ENSNFUG00015019095) JMJD7 (ENSNFUG00015019081) fbxo34 (ENSNFUG00015019070) lgals3b (ENSNFUG00015019065) ARHGAP5 (ENSNFUG00015019054) ENSNFUG00015019050 ENSNFUG00015019019 ESR2B (ENSNFUG00015018519) ENSNFUG00015018481 ENSNFUG00015018474 ENSNFUG00015018473 Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 NAME_4 ANCESTRAL SPECIES 104 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Mummichog MODERN SPECIES 2297 ENSFHEG00000008272 CDC25B (ENSFHEG00000008261) ap5s1 (ENSFHEG00000008244) ENSFHEG00000008237 gfra4a (ENSFHEG00000008223) ATRN (ENSFHEG00000008192) EIF2AK3 (ENSFHEG00000008112) rpia (ENSFHEG00000008006) slc4a11 (ENSFHEG00000007997) ENSFHEG00000007953 dnaaf9 (ENSFHEG00000007929) ENSFHEG00000007909 ENSFHEG00000007893 foxi2 (ENSFHEG00000007884) ENSFHEG00000007878 fgfr3 (ENSFHEG00000007853) #22 Sheepshead minnow MODERN SPECIES 285 ubl7b (ENSCVAG00000007150) cd276 (ENSCVAG00000007113) ENSCVAG00000007104 insyn1 (ENSCVAG00000007085) ENSCVAG00000007066 ENSCVAG00000007045 ENSCVAG00000007040 foxi2 (ENSCVAG00000007036) ENSCVAG00000007034 fgfr3 (ENSCVAG00000006981) #22 ENSCVAG00000005268 letm1 (ENSCVAG00000005250) ##23 nsd2 (ENSCVAG00000005168) #24 jade1 (ENSCVAG00000005134) asmt2 (ENSCVAG00000005088) pgrmc2 (ENSCVAG00000005059) ENSCVAG00000005046 ENSCVAG00000004976 ahsa1b (ENSCVAG00000004956) cdca4 (ENSCVAG00000004923) si:dkey-177p2.6 (ENSCVAG00000004911) ENSCVAG00000004787 ENSCVAG00000004768 exoc3l4 (ENSCVAG00000004746) ENSCVAG00000004741 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000161979.B.o.cb.d.a.a.b.a.a ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Poecilia ANCESTRAL SPECIES 44 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000161979.B.o.cb.d.a.a.b.a.a ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 NAME_6 ANCESTRAL SPECIES 415 ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228.c ENSGT00940000159744.c Amazon molly MODERN SPECIES 477 foxi2 (ENSPFOG00000002886) ENSPFOG00000002904 fgfr3 (ENSPFOG00000002944) #22 letm1 (ENSPFOG00000003309) ##23 nsd2 (ENSPFOG00000003560) #24 jade1 (ENSPFOG00000003792) asmt2 (ENSPFOG00000003894) pgrmc2 (ENSPFOG00000003988) Sailfin molly MODERN SPECIES 517 fgfr3 (ENSPLAG00000005710) #22 letm1 (ENSPLAG00000005685) ##23 ENSPLAG00000005649 #24 nsd2 (ENSPLAG00000005631) #24 jade1 (ENSPLAG00000000833) asmt2 (ENSPLAG00000005587) pgrmc2 (ENSPLAG00000005522) Guppy MODERN SPECIES 453 CDC25B (ENSPREG00000006892) ap5s1 (ENSPREG00000006882) gfra4a (ENSPREG00000006867) ATRN (ENSPREG00000006804) EIF2AK3 (ENSPREG00000006747) rpia (ENSPREG00000006713) slc4a11 (ENSPREG00000006620) ENSPREG00000006563 ENSPREG00000006519 dnaaf9 (ENSPREG00000006418) ENSPREG00000006376 ENSPREG00000006385 ENSPREG00000006360 foxi2 (ENSPREG00000006353) ENSPREG00000006345 fgfr3 (ENSPREG00000006269) #22 letm1 (ENSPREG00000006148) ##23 nsd2 (ENSPREG00000006099) #24 jade1 (ENSPREG00000006043) pgrmc2 (ENSPREG00000006009) ENSPREG00000005980 ENSPREG00000005955 ENSPREG00000005946 cdca4 (ENSPREG00000005921) ENSPREG00000005914 ahsa1b (ENSPREG00000005888) ENSPREG00000005850 ENSPREG00000005825 exoc3l4 (ENSPREG00000005791) ENSPREG00000005761 vps29 (ENSPREG00000005729) Platyfish MODERN SPECIES 10 ap5s1 (ENSXMAG00000026139) gfra4a (ENSXMAG00000002475) ATRN (ENSXMAG00000002433) ENSXMAG00000023573 EIF2AK3 (ENSXMAG00000002407) rpia (ENSXMAG00000002395) slc4a11 (ENSXMAG00000025385) ENSXMAG00000024583 dnaaf9 (ENSXMAG00000007136) ENSXMAG00000025775 ENSXMAG00000030023 ENSXMAG00000023134 foxi2 (ENSXMAG00000025063) ENSXMAG00000004701 ENSXMAG00000021715 fgfr3 (ENSXMAG00000026115) #22 letm1 (ENSXMAG00000008107) ##23 ENSXMAG00000026440 #24 nsd2 (ENSXMAG00000008116) #24 jade1 (ENSXMAG00000008136) asmt2 (ENSXMAG00000009925) pgrmc2 (ENSXMAG00000024645) ENSXMAG00000008150 ENSXMAG00000022268 ahsa1b (ENSXMAG00000022100) cdca4 (ENSXMAG00000019446) si:dkey-177p2.6 (ENSXMAG00000008172) ENSXMAG00000024007 ENSXMAG00000025271 exoc3l4 (ENSXMAG00000014925) ENSXMAG00000014914 Oryzias ANCESTRAL SPECIES 3 ENSGT00940000156540.a ENSGT00730000111179.b ENSGT00940000176966 ENSGT00940000154656.ob.a ENSGT00940000156116.A ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.a ENSGT00940000163336 ENSGT00940000168728 ENSGT00390000004172 Oryzias_b ANCESTRAL SPECIES 39 ENSGT00940000156540.a ENSGT00730000111179.b ENSGT00940000176966 ENSGT00940000154656.ob.a ENSGT00940000156116.A ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00940000164472.a.a.b.b.a.a.b.b.a.a.b.b ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.a ENSGT00940000163336 ENSGT00940000168728 Indian medaka MODERN SPECIES ENSOMEG00000004893 ENSOMEG00000004883 ENSOMEG00000004869 ENSOMEG00000004858 slc4a11 (ENSOMEG00000004833) rpia (ENSOMEG00000004773) EIF2AK3 (ENSOMEG00000004741) foxi2 (ENSOMEG00000004683) c1d (ENSOMEG00000004672) ENSOMEG00000004664 ENSOMEG00000004651 ENSOMEG00000004634 ENSOMEG00000004615 ENSOMEG00000000838 ENSOMEG00000004593 fgfr3 (ENSOMEG00000004574) #22 ENSOMEG00000004505 rsph3 (ENSOMEG00000004427) ENSOMEG00000004388 letm1 (ENSOMEG00000004367) ##23 nsd2 (ENSOMEG00000004293) #24 jade1 (ENSOMEG00000004266) asmt2 (ENSOMEG00000004237) pgrmc2 (ENSOMEG00000004227) ENSOMEG00000004210 ahsa1b (ENSOMEG00000004175) cdca4 (ENSOMEG00000004162) si:dkey-177p2.6 (ENSOMEG00000004154) ENSOMEG00000004144 ENSOMEG00000004131 rsph3 (ENSOMEG00000004121) Javanese ricefish MODERN SPECIES 14 esr2b (ENSOJAG00000021047) ap5s1 (ENSOJAG00000021055) ENSOJAG00000021061 ENSOJAG00000021062 gfra4a (ENSOJAG00000003532) ENSOJAG00000003545 ENSOJAG00000003564 ATRN (ENSOJAG00000004005) ENSOJAG00000005337 ENSOJAG00000005356 ENSOJAG00000005364 slc4a11 (ENSOJAG00000005396) rpia (ENSOJAG00000005657) foxi2 (ENSOJAG00000006481) ENSOJAG00000006503 fgfr3 (ENSOJAG00000007719) #22 ENSOJAG00000017735 ENSOJAG00000018277 ENSOJAG00000018297 LRFN2 (ENSOJAG00000018311) ENSOJAG00000018364 spdya (ENSOJAG00000018376) trmt61b (ENSOJAG00000018387) wdr43 (ENSOJAG00000018480) ENSOJAG00000018756 ENSOJAG00000018762 ENSOJAG00000018780 CLIP4 (ENSOJAG00000018838) slc66a3 (ENSOJAG00000018864) rock2a (ENSOJAG00000018887) sobpa (ENSOJAG00000019622) Oryzias_a ANCESTRAL SPECIES 29 ENSGT00940000156540.a ENSGT00730000111179.b ENSGT00940000176966 ENSGT00940000154656.ob.a.e ENSGT00940000156116.A ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000168728 ENSGT00390000004172 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Japanese Medaka HdrR MODERN SPECIES 14 ATRN (ENSORLG00000017996) ENSORLG00000028516 ENSORLG00000026755 ENSORLG00000030269 ENSORLG00000027235 cfd (ENSORLG00000017983) ENSORLG00000017986 ENSORLG00000027274 ENSORLG00000029939 slc4a11 (ENSORLG00000017987) rpia (ENSORLG00000023480) eif2ak3 (ENSORLG00000017993) ENSORLG00000029298 foxi2 (ENSORLG00000017977) ENSORLG00000030291 fgfr3 (ENSORLG00000017972) #22 letm1 (ENSORLG00000026285) ##23 nsd2 (ENSORLG00000029684) #24 jade1 (ENSORLG00000017964) asmt2 (ENSORLG00000017961) pgrmc2 (ENSORLG00000017957) ENSORLG00000017954 ENSORLG00000023447 ahsa1b (ENSORLG00000017948) cdca4 (ENSORLG00000017941) si:dkey-177p2.6 (ENSORLG00000021887) ENSORLG00000027786 ENSORLG00000030539 ENSORLG00000021797 ENSORLG00000024013 rsph3 (ENSORLG00000017939) Chinese medaka MODERN SPECIES 889 fgfr3 (ENSOSIG00000005052) #22 letm1 (ENSOSIG00000004899) ##23 nsd2 (ENSOSIG00000004846) #24 jade1 (ENSOSIG00000004831) asmt2 (ENSOSIG00000004823) pgrmc2 (ENSOSIG00000004809) ENSOSIG00000004806 ahsa1b (ENSOSIG00000004778) cdca4 (ENSOSIG00000004773) Ovalentaria_B ANCESTRAL SPECIES 24 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT00940000164834.a ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Pomacentridae ANCESTRAL SPECIES 22 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000165596 ENSGT00940000165600 ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT00940000164834.a ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Pomacentridae_A ANCESTRAL SPECIES 31 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165336.a.a.a.h ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT00940000164834.a ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Amphiprion ANCESTRAL SPECIES 27 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165336.a.a.a.h.b ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Clown anemonefish MODERN SPECIES 1892 ENSAOCG00000004054 dnaaf9 (ENSAOCG00000004210) ENSAOCG00000004245 ENSAOCG00000004253 foxi2 (ENSAOCG00000004259) ENSAOCG00000004266 fgfr3 (ENSAOCG00000004302) #22 letm1 (ENSAOCG00000004336) ##23 nsd2 (ENSAOCG00000002621) #24 Orange clownfish MODERN SPECIES 9 noto (ENSAPEG00000005298) CDC25B (ENSAPEG00000005167) ap5s1 (ENSAPEG00000005155) selenou1b (ENSAPEG00000005140) gfra4a (ENSAPEG00000005102) ATRN (ENSAPEG00000005019) EIF2AK3 (ENSAPEG00000004914) rpia (ENSAPEG00000004888) slc4a11 (ENSAPEG00000004828) ENSAPEG00000004812 dnaaf9 (ENSAPEG00000004711) ENSAPEG00000004685 ENSAPEG00000004659 foxi2 (ENSAPEG00000004629) ENSAPEG00000004613 fgfr3 (ENSAPEG00000004513) #22 letm1 (ENSAPEG00000004405) ##23 nsd2 (ENSAPEG00000004338) #24 jade1 (ENSAPEG00000004283) asmt2 (ENSAPEG00000004192) pgrmc2 (ENSAPEG00000004176) ENSAPEG00000004126 ENSAPEG00000004088 ahsa1b (ENSAPEG00000004042) cdca4 (ENSAPEG00000004021) si:dkey-177p2.6 (ENSAPEG00000004001) ENSAPEG00000003968 ENSAPEG00000003897 ENSAPEG00000003871 exoc3l4 (ENSAPEG00000003835) TNFAIP2 (ENSAPEG00000003816) Spiny chromis MODERN SPECIES 718 ENSAPOG00000015287 fgfr3 (ENSAPOG00000015273) #22 ENSAPOG00000015204 Bicolor damselfish MODERN SPECIES 857 foxi2 (ENSSPAG00000020950) ENSSPAG00000020956 fgfr3 (ENSSPAG00000020969) #22 Cichlidae ANCESTRAL SPECIES 37 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a.i.a.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158570.o ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.a.c.a.j.a.a ENSGT01030000234613.b.a.a.c.a.j.a.b Haplochromini ANCESTRAL SPECIES 42 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158570.o ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.a.c.a.j.a.a ENSGT01030000234613.b.a.a.c.a.j.a.b Haplochromini_A ANCESTRAL SPECIES 44 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT01100000263664.a.a.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158570.o ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.a.c.a.j.a.a ENSGT01030000234613.b.a.a.c.a.j.a.b Haplochromini_B ANCESTRAL SPECIES 55 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000179604 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT01100000263664.a.a.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158570.o ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00940000168728 ENSGT01030000234613.b.a.a.c.a.j.a.a ENSGT01030000234613.b.a.a.c.a.j.a.b ENSGT01030000234613.b.a.a.c.a.j.b Eastern happy MODERN SPECIES 10 ap5s1 (ENSACLG00000013536) ENSACLG00000013530 ENSACLG00000013029 gfra4a (ENSACLG00000013024) ATRN (ENSACLG00000012747) EIF2AK3 (ENSACLG00000012653) rpia (ENSACLG00000012576) ENSACLG00000012564 slc4a11 (ENSACLG00000012446) ENSACLG00000012416 dnaaf9 (ENSACLG00000012348) ENSACLG00000012317 ENSACLG00000012325 foxi2 (ENSACLG00000012312) ENSACLG00000012299 fgfr3 (ENSACLG00000012190) #22 letm1 (ENSACLG00000012126) ##23 nsd2 (ENSACLG00000012052) #24 ENSACLG00000012040 asmt2 (ENSACLG00000012031) pgrmc2 (ENSACLG00000012016) ENSACLG00000011948 ENSACLG00000011929 ahsa1b (ENSACLG00000011869) cdca4 (ENSACLG00000011837) si:dkey-177p2.6 (ENSACLG00000011833) ENSACLG00000011815 ENSACLG00000011799 ENSACLG00000011639 ENSACLG00000011602 ENSACLG00000011579 Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005003532 ENSMZEG00005003508 ENSMZEG00005003472 gfra4a (ENSMZEG00005003463) ATRN (ENSMZEG00005003375) EIF2AK3 (ENSMZEG00005003312) rpia (ENSMZEG00005003282) ENSMZEG00005003263 slc4a11 (ENSMZEG00005003156) ENSMZEG00005003114 dnaaf9 (ENSMZEG00005002915) ENSMZEG00005002897 ENSMZEG00005002891 foxi2 (ENSMZEG00005002881) ENSMZEG00005002873 fgfr3 (ENSMZEG00005002787) #22 letm1 (ENSMZEG00005002737) ##23 nsd2 (ENSMZEG00005002708) #24 ENSMZEG00005002696 asmt2 (ENSMZEG00005002616) pgrmc2 (ENSMZEG00005002598) ENSMZEG00005002545 ENSMZEG00005002527 ahsa1b (ENSMZEG00005002495) cdca4 (ENSMZEG00005002473) si:dkey-177p2.6 (ENSMZEG00005002460) ENSMZEG00005002450 ENSMZEG00005002435 ENSMZEG00005002412 ENSMZEG00005002389 ENSMZEG00005002356 P. nyererei MODERN SPECIES 324 emx1 (ENSPNYG00000018039) noto (ENSPNYG00000018017) cdc25b (ENSPNYG00000017961) ap5s1 (ENSPNYG00000017952) gfra4a (ENSPNYG00000017873) ATRN (ENSPNYG00000017794) EIF2AK3 (ENSPNYG00000017747) rpia (ENSPNYG00000017715) slc4a11 (ENSPNYG00000017688) ENSPNYG00000017676 ENSPNYG00000017663 ENSPNYG00000017649 ENSPNYG00000017640 foxi2 (ENSPNYG00000017605) ENSPNYG00000017588 fgfr3 (ENSPNYG00000017549) #22 letm1 (ENSPNYG00000017522) ##23 ENSPNYG00000017497 #24 nsd2 (ENSPNYG00000017469) #24 ENSPNYG00000017455 asmt2 (ENSPNYG00000017406) pgrmc2 (ENSPNYG00000017389) ENSPNYG00000017357 ENSPNYG00000017346 ahsa1b (ENSPNYG00000017307) cdca4 (ENSPNYG00000017292) si:dkey-177p2.6 (ENSPNYG00000017283) ENSPNYG00000017260 ENSPNYG00000017226 ENSPNYG00000017216 ENSPNYG00000017199 Burton s mouthbrooder MODERN SPECIES 378 emx1 (ENSHBUG00000010432) noto (ENSHBUG00000010421) CDC25B (ENSHBUG00000010407) gfra4a (ENSHBUG00000010396) ATRN (ENSHBUG00000010380) EIF2AK3 (ENSHBUG00000010330) rpia (ENSHBUG00000000267) slc4a11 (ENSHBUG00000010198) ENSHBUG00000010107 ENSHBUG00000010095 ENSHBUG00000010073 ENSHBUG00000010053 ENSHBUG00000000869 foxi2 (ENSHBUG00000010027) ENSHBUG00000010022 fgfr3 (ENSHBUG00000010008) #22 letm1 (ENSHBUG00000009958) ##23 nsd2 (ENSHBUG00000009944) #24 ENSHBUG00000009846 asmt2 (ENSHBUG00000009769) pgrmc2 (ENSHBUG00000009744) ENSHBUG00000009730 ENSHBUG00000009701 ahsa1b (ENSHBUG00000009687) cdca4 (ENSHBUG00000009662) si:dkey-177p2.6 (ENSHBUG00000009647) ENSHBUG00000009644 Lyretail cichlid MODERN SPECIES 299 noto (ENSNBRG00000024104) ENSNBRG00000024099 ap5s1 (ENSNBRG00000024096) ENSNBRG00000024090 gfra4a (ENSNBRG00000024085) ATRN (ENSNBRG00000024070) EIF2AK3 (ENSNBRG00000023980) rpia (ENSNBRG00000023943) slc4a11 (ENSNBRG00000023937) ENSNBRG00000023934 ENSNBRG00000023933 ENSNBRG00000023929 ENSNBRG00000023925 foxi2 (ENSNBRG00000023917) ENSNBRG00000023914 fgfr3 (ENSNBRG00000023909) #22 letm1 (ENSNBRG00000023899) ##23 nsd2 (ENSNBRG00000023888) #24 ENSNBRG00000023877 asmt2 (ENSNBRG00000023867) pgrmc2 (ENSNBRG00000023859) ENSNBRG00000023857 ENSNBRG00000023846 ENSNBRG00000023837 ahsa1b (ENSNBRG00000023827) cdca4 (ENSNBRG00000023822) si:dkey-177p2.6 (ENSNBRG00000023817) ENSNBRG00000023808 ENSNBRG00000023783 ENSNBRG00000023779 ENSNBRG00000023772 Nile tilapia MODERN SPECIES 10 CDC25B (ENSONIG00000012295) ap5s1 (ENSONIG00000012300) ENSONIG00000028241 ENSONIG00000040004 gfra4a (ENSONIG00000041946) ATRN (ENSONIG00000012302) EIF2AK3 (ENSONIG00000012314) rpia (ENSONIG00000012320) slc4a11 (ENSONIG00000012322) ENSONIG00000012325 dnaaf9 (ENSONIG00000012327) ENSONIG00000012342 ENSONIG00000029006 foxi2 (ENSONIG00000012345) ENSONIG00000033578 fgfr3 (ENSONIG00000012350) #22 letm1 (ENSONIG00000012371) ##23 nsd2 (ENSONIG00000012377) #24 jade1 (ENSONIG00000012379) asmt2 (ENSONIG00000036240) pgrmc2 (ENSONIG00000033876) ENSONIG00000012386 ENSONIG00000030302 ahsa1b (ENSONIG00000012392) cdca4 (ENSONIG00000021035) si:dkey-177p2.6 (ENSONIG00000012393) ENSONIG00000040212 ENSONIG00000034348 exoc3l4 (ENSONIG00000012398) ENSONIG00000012400 ENSONIG00000012403 Midas cichlid MODERN SPECIES 1272 gfra4a (ENSACIG00000023982) ATRN (ENSACIG00000023979) EIF2AK3 (ENSACIG00000023948) rpia (ENSACIG00000023941) slc4a11 (ENSACIG00000023939) ENSACIG00000023936 dnaaf9 (ENSACIG00000023931) ENSACIG00000023928 foxi2 (ENSACIG00000023925) ENSACIG00000023923 fgfr3 (ENSACIG00000023919) #22 letm1 (ENSACIG00000023916) ##23 nsd2 (ENSACIG00000023914) #24 jade1 (ENSACIG00000023910) asmt2 (ENSACIG00000023903) pgrmc2 (ENSACIG00000023899) ENSACIG00000023890 ENSACIG00000023884 ahsa1b (ENSACIG00000023880) cdca4 (ENSACIG00000023875) si:dkey-177p2.6 (ENSACIG00000023872) ENSACIG00000023870 ENSACIG00000023856 ENSACIG00000023851 ENSACIG00000023845 vps29 (ENSACIG00000023840) Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00990000210253 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Carangaria ANCESTRAL SPECIES 10 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352.x ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Seriola ANCESTRAL SPECIES 3 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Greater amberjack MODERN SPECIES 62 ENSSDUG00000003196 si:dkey-33c12.4 (ENSSDUG00000003213) DCTN1 (ENSSDUG00000003271) ENSSDUG00000003470 ##27 SLC39A8 (ENSSDUG00000003482) manba (ENSSDUG00000003513) ube2d3 (ENSSDUG00000003535) ENSSDUG00000003555 CPXM1 (ENSSDUG00000003604) wdr32 (ENSSDUG00000003847) HHIPL2 (ENSSDUG00000003875) ENSSDUG00000003897 ENSSDUG00000003909 foxi2 (ENSSDUG00000003922) ENSSDUG00000003927 fgfr3 (ENSSDUG00000003941) #22 letm1 (ENSSDUG00000004019) ##23 nsd2 (ENSSDUG00000004050) #24 jade1 (ENSSDUG00000004118) asmt2 (ENSSDUG00000004145) pgrmc2 (ENSSDUG00000004171) ENSSDUG00000004182 ENSSDUG00000004235 ahsa1b (ENSSDUG00000004251) cdca4 (ENSSDUG00000004270) si:dkey-177p2.6 (ENSSDUG00000004283) ENSSDUG00000004293 ENSSDUG00000004323 exoc3l4 (ENSSDUG00000004344) ENSSDUG00000004423 vps29 (ENSSDUG00000004442) Yellowtail amberjack MODERN SPECIES 3262 slc39a9 (ENSSLDG00000010421) RBM25 (ENSSLDG00000010342) arg2 (ENSSLDG00000010285) vti1b (ENSSLDG00000010255) rdh12 (ENSSLDG00000010235) zfyve26 (ENSSLDG00000010028) si:ch211-10a23.2 (ENSSLDG00000009977) plek2 (ENSSLDG00000009959) TC2N (ENSSLDG00000009938) fbln5 (ENSSLDG00000009902) trip11 (ENSSLDG00000009815) ENSSLDG00000009780 ENSSLDG00000009767 foxi2 (ENSSLDG00000009754) ENSSLDG00000009744 fgfr3 (ENSSLDG00000009653) #22 letm1 (ENSSLDG00000009580) ##23 nsd2 (ENSSLDG00000009511) #24 jade1 (ENSSLDG00000009486) Barramundi perch MODERN SPECIES 313 ATRN (ENSLCAG00010003042) EIF2AK3 (ENSLCAG00010002880) rpia (ENSLCAG00010002841) slc4a11 (ENSLCAG00010002780) dnaaf9 (ENSLCAG00010002748) ENSLCAG00010002729 foxi2 (ENSLCAG00010002728) ENSLCAG00010002727 fgfr3 (ENSLCAG00010001228) #22 letm1 (ENSLCAG00010000790) ##23 nsd2 (ENSLCAG00010000746) #24 Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 Tongue sole MODERN SPECIES sfxn5a (ENSCSEG00000015667) emx1 (ENSCSEG00000015661) noto (ENSCSEG00000015654) ENSCSEG00000015640 ap5s1 (ENSCSEG00000015633) ENSCSEG00000015630 gfra4a (ENSCSEG00000015617) ATRN (ENSCSEG00000015399) EIF2AK3 (ENSCSEG00000015368) rpia (ENSCSEG00000015347) slc4a11 (ENSCSEG00000015287) ENSCSEG00000015265 dnaaf9 (ENSCSEG00000015244) ENSCSEG00000015236 foxi2 (ENSCSEG00000015231) fgfr3 (ENSCSEG00000015127) #22 letm1 (ENSCSEG00000013635) ##23 nsd2 (ENSCSEG00000013567) #24 jade1 (ENSCSEG00000013541) pgrmc2 (ENSCSEG00000013533) ENSCSEG00000013519 ENSCSEG00000013509 ahsa1b (ENSCSEG00000013438) cdca4 (ENSCSEG00000013426) si:dkey-177p2.6 (ENSCSEG00000013418) ENSCSEG00000013411 ENSCSEG00000013406 exoc3l4 (ENSCSEG00000013401) ENSCSEG00000013393 vps29 (ENSCSEG00000013380) eif5 (ENSCSEG00000013347) Turbot MODERN SPECIES 8 sfxn5a (ENSSMAG00000007776) emx1 (ENSSMAG00000007754) noto (ENSSMAG00000007744) ENSSMAG00000007692 ap5s1 (ENSSMAG00000007672) gfra4a (ENSSMAG00000007459) ENSSMAG00000007222 ENSSMAG00000007109 rpia (ENSSMAG00000007050) slc4a11 (ENSSMAG00000006939) dnaaf9 (ENSSMAG00000006894) ENSSMAG00000006880 ENSSMAG00000006870 foxi2 (ENSSMAG00000006868) ENSSMAG00000006841 fgfr3 (ENSSMAG00000006801) #22 letm1 (ENSSMAG00000006721) ##23 nsd2 (ENSSMAG00000006581) #24 jade1 (ENSSMAG00000006505) asmt2 (ENSSMAG00000006433) pgrmc2 (ENSSMAG00000006418) ENSSMAG00000006347 ENSSMAG00000006294 ENSSMAG00000034451 ENSSMAG00000006250 ENSSMAG00000024708 ENSSMAG00000006093 ENSSMAG00000006072 EIF5 (ENSSMAG00000006036) mark3a (ENSSMAG00000005737) ENSSMAG00000006025 Anabantaria ANCESTRAL SPECIES 10 ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000160366 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000163336 ENSGT00940000168728 ENSGT01030000234613.b.a.b Zig-zag eel MODERN SPECIES 14 ENSMAMG00000000102 emx1 (ENSMAMG00000000101) noto (ENSMAMG00000000100) ENSMAMG00000000099 ap5s1 (ENSMAMG00000000098) gfra4a (ENSMAMG00000000097) ENSMAMG00000000096 ENSMAMG00000000095 rpia (ENSMAMG00000000094) slc4a11 (ENSMAMG00000000093) ENSMAMG00000000092 dnaaf9 (ENSMAMG00000000091) ENSMAMG00000000090 foxi2 (ENSMAMG00000000089) ENSMAMG00000028428 fgfr3 (ENSMAMG00000000087) #22 letm1 (ENSMAMG00000000086) ##23 nsd2 (ENSMAMG00000000085) #24 jade1 (ENSMAMG00000000084) asmt2 (ENSMAMG00000000083) pgrmc2 (ENSMAMG00000000082) ENSMAMG00000000081 ENSMAMG00000000080 ENSMAMG00000026494 ENSMAMG00000000078 ENSMAMG00000000077 ENSMAMG00000000076 ENSMAMG00000000074 ENSMAMG00000000075 ENSMAMG00000000073 ENSMAMG00000025617 Anabantoidei ANCESTRAL SPECIES 9 ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a.b ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000163336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Climbing perch MODERN SPECIES 13 sfxn5a (ENSATEG00000018650) emx1 (ENSATEG00000018637) noto (ENSATEG00000018628) ENSATEG00000018533 ap5s1 (ENSATEG00000028095) gfra4a (ENSATEG00000018486) ENSATEG00000018402 ENSATEG00000018381 rpia (ENSATEG00000018351) slc4a11 (ENSATEG00000018312) ENSATEG00000026508 dnaaf9 (ENSATEG00000018228) ENSATEG00000018218 foxi2 (ENSATEG00000018209) ENSATEG00000018171 fgfr3 (ENSATEG00000018092) #22 letm1 (ENSATEG00000018058) ##23 nsd2 (ENSATEG00000018035) #24 jade1 (ENSATEG00000017984) asmt2 (ENSATEG00000017902) pgrmc2 (ENSATEG00000017889) ENSATEG00000017849 ENSATEG00000028173 ENSATEG00000017803 ENSATEG00000017795 ENSATEG00000017781 ENSATEG00000017717 ENSATEG00000017681 ENSATEG00000017664 ENSATEG00000017628 ENSATEG00000017616 Siamese fighting fish MODERN SPECIES 12 RAB11FIP5 (ENSBSLG00000026189) sfxn5a (ENSBSLG00000026190) emx1 (ENSBSLG00000026191) noto (ENSBSLG00000026192) ENSBSLG00000026193 ap5s1 (ENSBSLG00000026195) gfra4a (ENSBSLG00000007809) ATRN (ENSBSLG00000008056) EIF2AK3 (ENSBSLG00000010481) rpia (ENSBSLG00000011279) slc4a11 (ENSBSLG00000011321) ENSBSLG00000011609 ENSBSLG00000011695 ENSBSLG00000011833 foxi2 (ENSBSLG00000011857) fgfr3 (ENSBSLG00000012509) #22 ENSBSLG00000020752 letm1 (ENSBSLG00000021202) ##23 nsd2 (ENSBSLG00000021796) #24 jade1 (ENSBSLG00000022795) asmt2 (ENSBSLG00000022842) pgrmc2 (ENSBSLG00000022883) LARP1B (ENSBSLG00000022931) ENSBSLG00000023136 ahsa1b (ENSBSLG00000023153) cdca4 (ENSBSLG00000023230) si:dkey-177p2.6 (ENSBSLG00000023234) ENSBSLG00000023237 ENSBSLG00000023246 exoc3l4 (ENSBSLG00000023256) ENSBSLG00000023276 Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000180336 ENSGT00990000210253 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Tetraodontidae ANCESTRAL SPECIES 3 ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00990000210253 ENSGT00940000165073.a.b.b.b.a.b ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a Tetraodon MODERN SPECIES 1 ENSTNIG00000010548 sfxn5a (ENSTNIG00000010549) emx1 (ENSTNIG00000010550) noto (ENSTNIG00000010551) CDC25B (ENSTNIG00000010552) ap5s1 (ENSTNIG00000010553) gfra4a (ENSTNIG00000010554) ATRN (ENSTNIG00000010555) EIF2AK3 (ENSTNIG00000010556) rpia (ENSTNIG00000010557) slc4a11 (ENSTNIG00000010558) dnaaf9 (ENSTNIG00000010559) ENSTNIG00000006756 ENSTNIG00000006744 foxi2 (ENSTNIG00000003048) fgfr3 (ENSTNIG00000012404) #22 letm1 (ENSTNIG00000012403) ##23 nsd2 (ENSTNIG00000012402) #24 jade1 (ENSTNIG00000012401) asmt2 (ENSTNIG00000012400) pgrmc2 (ENSTNIG00000012399) ENSTNIG00000012398 ahsa1b (ENSTNIG00000012397) cdca4 (ENSTNIG00000012396) exoc3l4 (ENSTNIG00000000979) ENSTNIG00000000514 vps29 (ENSTNIG00000012395) eif5 (ENSTNIG00000012394) mark3a (ENSTNIG00000012393) ckba (ENSTNIG00000012392) trmt61a (ENSTNIG00000012391) Fugu MODERN SPECIES 11 noto (ENSTRUG00000017598) cdc25b (ENSTRUG00000017584) ap5s1 (ENSTRUG00000017581) ENSTRUG00000032295 gfra4a (ENSTRUG00000031411) ENSTRUG00000027485 ATRN (ENSTRUG00000001707) rpia (ENSTRUG00000003878) slc4a11 (ENSTRUG00000004080) ENSTRUG00000022771 dnaaf9 (ENSTRUG00000027011) ENSTRUG00000028684 foxi2 (ENSTRUG00000003477) ENSTRUG00000023573 ENSTRUG00000026287 fgfr3 (ENSTRUG00000003670) #22 letm1 (ENSTRUG00000004634) ##23 nsd2 (ENSTRUG00000004854) #24 jade1 (ENSTRUG00000005254) pgrmc2 (ENSTRUG00000022501) ENSTRUG00000005612 ENSTRUG00000023154 ahsa1b (ENSTRUG00000022592) cdca4 (ENSTRUG00000022645) si:dkey-177p2.6 (ENSTRUG00000020492) ENSTRUG00000030284 ENSTRUG00000027669 ENSTRUG00000029360 ENSTRUG00000024591 ENSTRUG00000006434 ENSTRUG00000029891 Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000180336 ENSGT00940000163336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 340 fgfr3 (ENSLBEG00000005923) #22 letm1 (ENSLBEG00000005845) ##23 ENSLBEG00000005811 jade1 (ENSLBEG00000005758) asmt2 (ENSLBEG00000005718) pgrmc2 (ENSLBEG00000005698) ENSLBEG00000005655 ENSLBEG00000005633 ahsa1b (ENSLBEG00000005598) cdca4 (ENSLBEG00000005583) si:dkey-177p2.6 (ENSLBEG00000005553) ENSLBEG00000005491 ENSLBEG00000005452 ENSLBEG00000005429 exoc3l4 (ENSLBEG00000005355) ENSLBEG00000005258 Ballan wrasse MODERN SPECIES 196 gfra4a (ENSLBEG00000004810) ATRN (ENSLBEG00000004310) EIF2AK3 (ENSLBEG00000004037) rpia (ENSLBEG00000003972) slc4a11 (ENSLBEG00000003880) ENSLBEG00000003805 dnaaf9 (ENSLBEG00000003736) ENSLBEG00000003708 ENSLBEG00000003693 foxi2 (ENSLBEG00000003647) ENSLBEG00000003626 ENSLBEG00000003591 #22 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000180336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 ENSGT00390000012669 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 ENSGT00390000012669 Gilthead seabream MODERN SPECIES 7 noto (ENSSAUG00010014256) CDC25B (ENSSAUG00010014253) ap5s1 (ENSSAUG00010014251) gfra4a (ENSSAUG00010014250) ATRN (ENSSAUG00010023368) EIF2AK3 (ENSSAUG00010022861) rpia (ENSSAUG00010022854) slc4a11 (ENSSAUG00010022849) ENSSAUG00010022847 dnaaf9 (ENSSAUG00010022586) ENSSAUG00010022577 ENSSAUG00010022575 foxi2 (ENSSAUG00010022573) ENSSAUG00010022572 ENSSAUG00010022571 fgfr3 (ENSSAUG00010021636) #22 letm1 (ENSSAUG00010020913) ##23 nsd2 (ENSSAUG00010020727) #24 jade1 (ENSSAUG00010020725) asmt2 (ENSSAUG00010020724) pgrmc2 (ENSSAUG00010020722) ENSSAUG00010020475 ENSSAUG00010020464 ahsa1b (ENSSAUG00010020460) cdca4 (ENSSAUG00010020459) si:dkey-177p2.6 (ENSSAUG00010020457) ENSSAUG00010020454 ENSSAUG00010020452 exoc3l4 (ENSSAUG00010020446) ENSSAUG00010020422 zfyve21 (ENSSAUG00010020416) Eupercaria_incertae_sedis ANCESTRAL SPECIES 25 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00530000063867.a.a ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT01050000245132 ENSGT00390000012669 European seabass MODERN SPECIES 2 RAB11FIP5 (ENSDLAG00005022373) sfxn5a (ENSDLAG00005022377) emx1 (ENSDLAG00005030328) noto (ENSDLAG00005030909) ENSDLAG00005022395 ap5s1 (ENSDLAG00005022398) gfra4a (ENSDLAG00005022401) ENSDLAG00005022413 ENSDLAG00005022530 slc4a11 (ENSDLAG00005023152) dnaaf9 (ENSDLAG00005023328) ENSDLAG00005031783 ENSDLAG00005023524 ENSDLAG00005030932 foxi2 (ENSDLAG00005032945) fgfr3 (ENSDLAG00005023582) #22 letm1 (ENSDLAG00005024363) ##23 nsd2 (ENSDLAG00005024506) #24 jade1 (ENSDLAG00005024607) asmt2 (ENSDLAG00005024622) pgrmc2 (ENSDLAG00005033902) ENSDLAG00005024642 ENSDLAG00005004153 ENSDLAG00005028608 ENSDLAG00005027228 ENSDLAG00005032534 ENSDLAG00005004265 ENSDLAG00005004281 ENSDLAG00005018914 ENSDLAG00005033435 ENSDLAG00005004580 Large yellow croaker MODERN SPECIES 495 emx1 (ENSLCRG00005014445) noto (ENSLCRG00005014444) CDC25B (ENSLCRG00005014443) ap5s1 (ENSLCRG00005014442) gfra4a (ENSLCRG00005014441) ATRN (ENSLCRG00005014389) EIF2AK3 (ENSLCRG00005013431) rpia (ENSLCRG00005013425) slc4a11 (ENSLCRG00005013384) ENSLCRG00005013383 dnaaf9 (ENSLCRG00005013378) ENSLCRG00005013375 ENSLCRG00005013374 foxi2 (ENSLCRG00005019904) ENSLCRG00005019903 fgfr3 (ENSLCRG00005010056) #22 letm1 (ENSLCRG00005008975) ##23 nsd2 (ENSLCRG00005008967) #24 ENSLCRG00005008962 jade1 (ENSLCRG00005008961) asmt2 (ENSLCRG00005008960) pgrmc2 (ENSLCRG00005008958) ENSLCRG00005008789 ENSLCRG00005008787 ahsa1b (ENSLCRG00005008785) cdca4 (ENSLCRG00005008784) si:dkey-177p2.6 (ENSLCRG00005008783) ENSLCRG00005008782 exoc3l4 (ENSLCRG00005008774) ENSLCRG00005008764 ENSLCRG00005008763 Perciformes ANCESTRAL SPECIES 12 ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000180336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 ENSGT00390000016478 Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00940000165596 ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165600 ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00390000012424.b ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000160366 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 ENSGT00390000016478 Channel bull blenny MODERN SPECIES 14 ap5s1 (ENSCGOG00000022617) ENSCGOG00000022616 gfra4a (ENSCGOG00000022614) ATRN (ENSCGOG00000022488) EIF2AK3 (ENSCGOG00000022353) rpia (ENSCGOG00000022345) slc4a11 (ENSCGOG00000022246) ENSCGOG00000022240 ENSCGOG00000022239 ENSCGOG00000022235 ENSCGOG00000022231 ENSCGOG00000022229 ENSCGOG00000022230 foxi2 (ENSCGOG00000022228) ENSCGOG00000022222 fgfr3 (ENSCGOG00000022164) #22 letm1 (ENSCGOG00000022073) ##23 nsd2 (ENSCGOG00000021958) #24 jade1 (ENSCGOG00000021944) asmt2 (ENSCGOG00000021940) pgrmc2 (ENSCGOG00000021936) ENSCGOG00000021921 ENSCGOG00000021917 ahsa1b (ENSCGOG00000021892) cdca4 (ENSCGOG00000021889) ENSCGOG00000021887 ENSCGOG00000021885 ENSCGOG00000021883 TNFAIP2 (ENSCGOG00000021878) vps29 (ENSCGOG00000021863) eif5 (ENSCGOG00000021717) Pike perch MODERN SPECIES 53 ENSSLUG00000020044 EIF2AK3 (ENSSLUG00000020079) rpia (ENSSLUG00000020684) slc4a11 (ENSSLUG00000020706) ENSSLUG00000020759 dnaaf9 (ENSSLUG00000020769) ENSSLUG00000020797 foxi2 (ENSSLUG00000020799) ENSSLUG00000020801 ENSSLUG00000020809 ENSSLUG00000020814 ENSSLUG00000020819 fgfr3 (ENSSLUG00000020851) #22 letm1 (ENSSLUG00000021563) ##23 ENSSLUG00000022447 #24 nsd2 (ENSSLUG00000022469) #24 jade1 (ENSSLUG00000022478) asmt2 (ENSSLUG00000022489) pgrmc2 (ENSSLUG00000022500) ENSSLUG00000022505 ENSSLUG00000022516 ENSSLUG00000022557 ahsa1b (ENSSLUG00000022566) cdca4 (ENSSLUG00000022582) si:dkey-177p2.6 (ENSSLUG00000022587) ENSSLUG00000022591 ENSSLUG00000022602 exoc3l4 (ENSSLUG00000022607) Cottioidei ANCESTRAL SPECIES 8 ENSGT01030000234641.a.a.b ENSGT00940000161476 ENSGT00940000154361.B ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000160491.d.a ENSGT00940000157346 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000154894.b ENSGT00390000003692 ENSGT00940000164100.B ENSGT00940000162161.B ENSGT00940000166929 ENSGT00940000162660.b.a.g.a ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429.d #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 ENSGT00940000155144.n ENSGT00530000063867.a.b ENSGT00940000180336 ENSGT00940000168728 ENSGT01030000234613.b.a.b ENSGT01030000234613.b.a.a.c.a ENSGT00390000012669 ENSGT00390000016478 ENSGT00940000154862.x.b Lumpfish MODERN SPECIES 14 emx1 (ENSCLMG00005014890) noto (ENSCLMG00005014887) ENSCLMG00005014885 ap5s1 (ENSCLMG00005014881) gfra4a (ENSCLMG00005014879) ENSCLMG00005014877 ATRN (ENSCLMG00005014797) EIF2AK3 (ENSCLMG00005014378) rpia (ENSCLMG00005014367) slc4a11 (ENSCLMG00005014040) dnaaf9 (ENSCLMG00005014012) ENSCLMG00005014002 ENSCLMG00005014000 foxi2 (ENSCLMG00005013997) ENSCLMG00005013994 fgfr3 (ENSCLMG00005007355) #22 letm1 (ENSCLMG00005007206) ##23 nsd2 (ENSCLMG00005005973) #24 d2hgdh (ENSCLMG00005005926) acvr1l (ENSCLMG00005005907) otomp (ENSCLMG00005005903) ENSCLMG00005005902 hs6st1b (ENSCLMG00005005851) uggt1 (ENSCLMG00005005178) ENSCLMG00005005163 ola1 (ENSCLMG00005004853) TRA2B (ENSCLMG00005004845) ENSCLMG00005004839 ENSCLMG00005004838 atg9a (ENSCLMG00005004828) ENSCLMG00005003159 Stickleback MODERN SPECIES 15 ENSGACG00000004311 traf3 (ENSGACG00000004323) ankrd9 (ENSGACG00000004348) tecpr2 (ENSGACG00000004351) ENSGACG00000004368 ENSGACG00000004369 cinp (ENSGACG00000004371) dkc1 (ENSGACG00000004373) ATRN (ENSGACG00000004400) EIF2AK3 (ENSGACG00000004416) rpia (ENSGACG00000004430) slc4a11 (ENSGACG00000004484) dnaaf9 (ENSGACG00000004495) ENSGACG00000004515 ENSGACG00000004525 fgfr3 (ENSGACG00000004533) #22 letm1 (ENSGACG00000004541) ##23 nsd2 (ENSGACG00000004554) #24 jade1 (ENSGACG00000004571) asmt2 (ENSGACG00000004587) ENSGACG00000004598 pgrmc2 (ENSGACG00000004602) ENSGACG00000004609 ahsa1b (ENSGACG00000004625) cdca4 (ENSGACG00000004663) si:dkey-177p2.6 (ENSGACG00000004666) ENSGACG00000004669 ENSGACG00000004674 exoc3l4 (ENSGACG00000004676) ENSGACG00000004683 ENSGACG00000004692 Tiger tail seahorse MODERN SPECIES 43 fgfr3 (ENSHCOG00000001033) #22 letm1 (ENSHCOG00000001017) ##23 nsd2 (ENSHCOG00000001008) #24 jade1 (ENSHCOG00000000999) asmt2 (ENSHCOG00000000989) ENSHCOG00000000977 ENSHCOG00000000041 ENSHCOG00000000961 ENSHCOG00000000956 si:dkey-177p2.6 (ENSHCOG00000000950) cdca4 (ENSHCOG00000000948) ahsa1b (ENSHCOG00000000941) ENSHCOG00000000923 ENSHCOG00000000918 pgrmc2 (ENSHCOG00000000911) vps29 (ENSHCOG00000000908) Osteoglossiformes ANCESTRAL SPECIES 453 ENSGT00940000159880 #22 ENSGT00950000183167.a.a ##23 ENSGT00940000157429 #24 ENSGT00940000158247 ENSGT00940000166228 ENSGT00940000159744 ENSGT00940000154718 P. kingsleyae MODERN SPECIES 132 ENSPKIG00000013429 ENSPKIG00000013447 SMU1 (ENSPKIG00000013499) dnaja1 (ENSPKIG00000013569) aptx (ENSPKIG00000013601) ENSPKIG00000013626 TBC1D2 (ENSPKIG00000013647) SLC44A1 (ENSPKIG00000013688) abca1a (ENSPKIG00000013773) ENSPKIG00000013853 ENSPKIG00000013875 stra6l (ENSPKIG00000013901) exoc1l (ENSPKIG00000013937) ENSPKIG00000013958 rpia (ENSPKIG00000013993) fgfr3 (ENSPKIG00000014030) #22 letm1 (ENSPKIG00000014103) ##23 nsd2 (ENSPKIG00000014170) #24 ENSPKIG00000014222 jade1 (ENSPKIG00000014272) asmt2 (ENSPKIG00000014331) pgrmc2 (ENSPKIG00000014348) ENSPKIG00000014360 plk4 (ENSPKIG00000014404) HSPA4L (ENSPKIG00000014472) ENSPKIG00000014577 #18 Asian bonytongue MODERN SPECIES 13 ENSSFOG00015028714 ENSSFOG00015005223 ENSSFOG00015029777 ENSSFOG00015026996 ENSSFOG00015031902 ENSSFOG00015025379 ENSSFOG00015004927 eif4a3 (ENSSFOG00015004896) ENSSFOG00015004849 sipa1l1 (ENSSFOG00015004786) ENSSFOG00015032639 ENSSFOG00015004715 fads2 (ENSSFOG00015004678) ENSSFOG00015004664 ENSSFOG00015004652 fgfr3 (ENSSFOG00015004525) #22 letm1 (ENSSFOG00015004498) ##23 nsd2 (ENSSFOG00015004451) #24 asmt2 (ENSSFOG00015004432) pgrmc2 (ENSSFOG00015004413) plk4 (ENSSFOG00015004394) ENSSFOG00015028958 ENSSFOG00015004338 mrpl35 (ENSSFOG00015032011) chmp3 (ENSSFOG00015033001) nansa (ENSSFOG00015004189) clta (ENSSFOG00015004164) cplx2l (ENSSFOG00015004105) xpa (ENSSFOG00015004069) LEPROTL1 (ENSSFOG00015004036) ENSSFOG00015004021 Spotted gar MODERN SPECIES 670 naca (ENSLOCG00000007330) ptges3b (ENSLOCG00000007299) baz2a (ENSLOCG00000007281) pfkmb (ENSLOCG00000007256) ENSLOCG00000007236 neurod4 (ENSLOCG00000018210) ENSLOCG00000007224 ZNF385A (ENSLOCG00000007204) gpr84 (ENSLOCG00000007191) ITGB7 (ENSLOCG00000007182) ENSLOCG00000007163 ENSLOCG00000007150 pfdn5 (ENSLOCG00000007134) LARP4 (ENSLOCG00000007113) tacc3 (ENSLOCG00000007068) #21 fgfr3 (ENSLOCG00000007042) #22 letm1 (ENSLOCG00000007015) ##23 nsd2 (ENSLOCG00000006985) #24 ENSLOCG00000006968 rnf4 (ENSLOCG00000006957) ENSLOCG00000006938 zfyve28 (ENSLOCG00000006897) atf7a (ENSLOCG00000006882) dip2ba (ENSLOCG00000006838) atf1 (ENSLOCG00000006826) ENSLOCG00000006813 scn8aa (ENSLOCG00000006769) fignl2 (ENSLOCG00000018208) ENSLOCG00000006747 ENSLOCG00000006738 stat6 (ENSLOCG00000006721) Reedfish MODERN SPECIES 13 atoh8 (ENSECRG00000018315) ENSECRG00000018332 fgfrl1a (ENSECRG00000018377) ENSECRG00000018416 spon2b (ENSECRG00000018430) #13 zgc:136929 (ENSECRG00000018480) #14 maea (ENSECRG00000018532) #15 uvssa (ENSECRG00000018560) nkx1.2lb (ENSECRG00000018615) #17 FAM53A (ENSECRG00000018641) #18 ENSECRG00000018664 slbp (ENSECRG00000018696) #19 tmem129 (ENSECRG00000018728) #20 TACC3 (ENSECRG00000018753) #21 mrpl35 (ENSECRG00000018790) FGFR3 (ENSECRG00000018877) #22 ENSECRG00000019343 ##23 ENSECRG00000019492 #24 rnf4 (ENSECRG00000019626) CFAP99 (ENSECRG00000019657) ENSECRG00000019702 zfyve28 (ENSECRG00000019753) MXD4 (ENSECRG00000019862) prelid1b (ENSECRG00000019891) haus3 (ENSECRG00000019922) nat8l (ENSECRG00000019942) #27 C4orf48 (ENSECRG00000019962) #26 nelfa (ENSECRG00000019984) #25 HSPA4L (ENSECRG00000020124) plk4 (ENSECRG00000021463) mfsd8 (ENSECRG00000021496)