Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b
Glires	ANCESTRAL SPECIES	4	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b
Rodentia	ANCESTRAL SPECIES	5	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Upper Galilee mountains blind mole rat	MODERN SPECIES	494	ENSNGAG00000014133 #7	Bbs10 (ENSNGAG00000022298) #8	Osbpl8 (ENSNGAG00000014231) #9	Zdhhc17 (ENSNGAG00000009049) #10	ENSNGAG00000023257 #11	E2f7 (ENSNGAG00000023644) #12	ENSNGAG00000024182 #13	Nav3 (ENSNGAG00000024210) #14	Syt1 (ENSNGAG00000020988) #15	Pawr (ENSNGAG00000015922) #16	Ppp1r12a (ENSNGAG00000023300) #17	ENSNGAG00000024231 #18	Otogl (ENSNGAG00000022483) #19	Ptprq (ENSNGAG00000024172) #20	Myf6 (ENSNGAG00000023390) #21	Myf5 (ENSNGAG00000003539) #22	Lin7a (ENSNGAG00000022827) #23	Acss3 (ENSNGAG00000015078) #24	Ppfia2 (ENSNGAG00000022807) #25	ENSNGAG00000012599 #26	Ccdc59 (ENSNGAG00000023637) #27	Mettl25 (ENSNGAG00000016246) #28	Tmtc2 (ENSNGAG00000023652) #29
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Chinese hamster chok1gshd	MODERN SPECIES	83	Osbpl8 (ENSCGRG00001021286) #9	Zdhhc17 (ENSCGRG00001007660) #10	Csrp2 (ENSCGRG00001000844) #11	E2f7 (ENSCGRG00001006568) #12	ENSCGRG00001011762	Nav3 (ENSCGRG00001022037) #14	Brcc3dc (ENSCGRG00001009076)	Syt1 (ENSCGRG00001000069) #15	ENSCGRG00001010398	ENSCGRG00001009057	Pawr (ENSCGRG00001011044) #16	Ppp1r12a (ENSCGRG00001017263) #17	Otogl (ENSCGRG00001018530) #19	Ptprq (ENSCGRG00001017128) #20	Myf6 (ENSCGRG00001006341) #21	Myf5 (ENSCGRG00001009370) #22	Lin7a (ENSCGRG00001003313) #23	Acss3 (ENSCGRG00001009906) #24	Ppfia2 (ENSCGRG00001020914) #25	ENSCGRG00001016413 #28	Syn3 (ENSCGRG00001000589)	Timp3 (ENSCGRG00001016875)	Fbxo7 (ENSCGRG00001019488)	Bpifc (ENSCGRG00001023438)	Rtcb (ENSCGRG00001011173)	Ascl4 (ENSCGRG00001008661)	ENSCGRG00001015102	Pwp1 (ENSCGRG00001019668)	Abtb3 (ENSCGRG00001021266)	Cry1 (ENSCGRG00001001431)	Mterf2 (ENSCGRG00001003171)
Golden Hamster	MODERN SPECIES	628	ENSMAUG00000021584	Nap1l1 (ENSMAUG00000016700)	Bbs10 (ENSMAUG00000018240) #8	Osbpl8 (ENSMAUG00000022092) #9	Zdhhc17 (ENSMAUG00000021687) #10	Csrp2 (ENSMAUG00000018727) #11	E2f7 (ENSMAUG00000010792) #12	Nav3 (ENSMAUG00000012505) #14	ENSMAUG00000014224	Syt1 (ENSMAUG00000012263) #15	ENSMAUG00000008984	Ppp1r12a (ENSMAUG00000021712) #17	Otogl (ENSMAUG00000009930) #19	Ptprq (ENSMAUG00000014282) #20	Myf6 (ENSMAUG00000019329) #21	Myf5 (ENSMAUG00000000933) #22	Lin7a (ENSMAUG00000007088) #23	Acss3 (ENSMAUG00000014131) #24	ENSMAUG00000019031	Ppfia2 (ENSMAUG00000021622) #25	Ccdc59 (ENSMAUG00000017516) #27	Mettl25 (ENSMAUG00000020950) #28	Tmtc2 (ENSMAUG00000015691) #29	Slc6a15 (ENSMAUG00000018360)	ENSMAUG00000001372	Alx1 (ENSMAUG00000015563)	Rassf9 (ENSMAUG00000012420)	Nts (ENSMAUG00000013146)	ENSMAUG00000004735	ENSMAUG00000008756	4930430F08Rik (ENSMAUG00000013438)
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Prairie vole	MODERN SPECIES	10	Phlda1 (ENSMOCG00000021889)	Nap1l1 (ENSMOCG00000012136)	Bbs10 (ENSMOCG00000020010) #8	Osbpl8 (ENSMOCG00000016633) #9	Zdhhc17 (ENSMOCG00000002407) #10	Csrp2 (ENSMOCG00000007217) #11	E2f7 (ENSMOCG00000021130) #12	Nav3 (ENSMOCG00000018391) #14	ENSMOCG00000020523	Syt1 (ENSMOCG00000012503) #15	Pawr (ENSMOCG00000019570) #16	Ppp1r12a (ENSMOCG00000018418) #17	Otogl (ENSMOCG00000018409) #19	Ptprq (ENSMOCG00000017842) #20	Myf6 (ENSMOCG00000015833) #21	Myf5 (ENSMOCG00000017847) #22	Lin7a (ENSMOCG00000021369) #23	Acss3 (ENSMOCG00000012086) #24	Ppfia2 (ENSMOCG00000007873) #25	Ccdc59 (ENSMOCG00000006690) #27	Mettl25 (ENSMOCG00000018000) #28	Tmtc2 (ENSMOCG00000012479) #29	ENSMOCG00000016887	ENSMOCG00000010194	Slc6a15 (ENSMOCG00000002838)	ENSMOCG00000019991	Alx1 (ENSMOCG00000007046)	Rassf9 (ENSMOCG00000010972)	Nts (ENSMOCG00000000690)	Mgat4c (ENSMOCG00000012409)	1700017N19Rik (ENSMOCG00000017688)
Northern American deer mouse	MODERN SPECIES	9	Phlda1 (ENSPEMG00000020277)	Nap1l1 (ENSPEMG00000000646)	Bbs10 (ENSPEMG00000031116) #8	Osbpl8 (ENSPEMG00000008934) #9	Zdhhc17 (ENSPEMG00000011257) #10	Csrp2 (ENSPEMG00000012653) #11	E2f7 (ENSPEMG00000013555) #12	Nav3 (ENSPEMG00000003783) #14	Brcc3dc (ENSPEMG00000012864)	Syt1 (ENSPEMG00000011853) #15	Pawr (ENSPEMG00000031267) #16	Ppp1r12a (ENSPEMG00000011824) #17	Otogl (ENSPEMG00000005921) #19	Ptprq (ENSPEMG00000019976) #20	Myf6 (ENSPEMG00000019751) #21	Myf5 (ENSPEMG00000018818) #22	Lin7a (ENSPEMG00000018576) #23	Acss3 (ENSPEMG00000017696) #24	Ppfia2 (ENSPEMG00000015993) #25	Ccdc59 (ENSPEMG00000031144) #27	Mettl25 (ENSPEMG00000013112) #28	Tmtc2 (ENSPEMG00000020725) #29	Mgat4c (ENSPEMG00000019377)	Nts (ENSPEMG00000024525)	Rassf9 (ENSPEMG00000012691)	Alx1 (ENSPEMG00000011110)	Lrriq1 (ENSPEMG00000012353)	Slc6a15 (ENSPEMG00000010154)	1700017N19Rik (ENSPEMG00000010447)	4930430F08Rik (ENSPEMG00000016254)	Cep290 (ENSPEMG00000008348)
Murinae	ANCESTRAL SPECIES	22	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Mus	ANCESTRAL SPECIES	23	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Mus_A	ANCESTRAL SPECIES	11	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Mus_B	ANCESTRAL SPECIES	10	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Mouse	MODERN SPECIES	1	Phlda1 (ENSMUSG00000020205)	Nap1l1 (ENSMUSG00000058799)	Bbs10 (ENSMUSG00000035759) #8	Osbpl8 (ENSMUSG00000020189) #9	Zdhhc17 (ENSMUSG00000035798) #10	Csrp2 (ENSMUSG00000020186) #11	E2f7 (ENSMUSG00000020185) #12	Nav3 (ENSMUSG00000020181) #14	Brcc3dc (ENSMUSG00000112039)	Syt1 (ENSMUSG00000035864) #15	Pawr (ENSMUSG00000035873) #16	Ppp1r12a (ENSMUSG00000019907) #17	Otogl (ENSMUSG00000091455) #19	Ptprq (ENSMUSG00000035916) #20	Myf6 (ENSMUSG00000035923) #21	Myf5 (ENSMUSG00000000435) #22	Lin7a (ENSMUSG00000019906) #23	Acss3 (ENSMUSG00000035948) #24	Ppfia2 (ENSMUSG00000053825) #25	Ccdc59 (ENSMUSG00000019897) #27	Mettl25 (ENSMUSG00000036009) #28	Tmtc2 (ENSMUSG00000036019) #29	Gm4340 (ENSMUSG00000090854)	Gm20765 (ENSMUSG00000095022)	Gm21312 (ENSMUSG00000094144)	Gm21304 (ENSMUSG00000097550)	Gm8764 (ENSMUSG00000097878)	Gm6763 (ENSMUSG00000097427)	Gm21293 (ENSMUSG00000091779)	Slc6a15 (ENSMUSG00000019894)	Lrriq1 (ENSMUSG00000019892)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
spretus	MODERN SPECIES	1	Krr1 (MGP_SPRETEiJ_G0016622)	Phlda1 (MGP_SPRETEiJ_G0016621)	Nap1l1 (MGP_SPRETEiJ_G0016620)	Bbs10 (MGP_SPRETEiJ_G0016619) #8	Osbpl8 (MGP_SPRETEiJ_G0016618) #9	Zdhhc17 (MGP_SPRETEiJ_G0016617) #10	Csrp2 (MGP_SPRETEiJ_G0016616) #11	E2f7 (MGP_SPRETEiJ_G0016615) #12	Nav3 (MGP_SPRETEiJ_G0016614) #14	Syt1 (MGP_SPRETEiJ_G0016613) #15	Pawr (MGP_SPRETEiJ_G0016612) #16	Ppp1r12a (MGP_SPRETEiJ_G0016611) #17	Otogl (MGP_SPRETEiJ_G0016610) #19	Ptprq (MGP_SPRETEiJ_G0016609) #20	Myf6 (MGP_SPRETEiJ_G0016608) #21	Myf5 (MGP_SPRETEiJ_G0016607) #22	Lin7a (MGP_SPRETEiJ_G0016606) #23	Acss3 (MGP_SPRETEiJ_G0016605) #24	Ppfia2 (MGP_SPRETEiJ_G0016604) #25	Ccdc59 (MGP_SPRETEiJ_G0016603) #27	Mettl25 (MGP_SPRETEiJ_G0016602) #28	Tmtc2 (MGP_SPRETEiJ_G0016601) #29	Slc6a15 (MGP_SPRETEiJ_G0016600)	MGP_SPRETEiJ_G0016599	Alx1 (MGP_SPRETEiJ_G0016598)	Rassf9 (MGP_SPRETEiJ_G0016597)	Nts (MGP_SPRETEiJ_G0016596)	Mgat4c (MGP_SPRETEiJ_G0016595)	1700017N19Rik (MGP_SPRETEiJ_G0016594)	4930430F08Rik (MGP_SPRETEiJ_G0016593)	Cep290 (MGP_SPRETEiJ_G0016592)
Steppe mouse	MODERN SPECIES	3222							Nav3 (ENSMSIG00000028730) #14	Syt1 (ENSMSIG00000028850) #15	Pawr (ENSMSIG00000028867) #16	Ppp1r12a (ENSMSIG00000028882) #17	ENSMSIG00000029031	ENSMSIG00000029033	Otogl (ENSMSIG00000029034) #19	Ptprq (ENSMSIG00000029070) #20	Myf6 (ENSMSIG00000029104) #21	Myf5 (ENSMSIG00000029106) #22
Ryukyu mouse	MODERN SPECIES	1	Krr1 (MGP_CAROLIEiJ_G0015800)	Phlda1 (MGP_CAROLIEiJ_G0015799)	Nap1l1 (MGP_CAROLIEiJ_G0015798)	Bbs10 (MGP_CAROLIEiJ_G0015797) #8	Osbpl8 (MGP_CAROLIEiJ_G0015796) #9	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #10	Csrp2 (MGP_CAROLIEiJ_G0015794) #11	E2f7 (MGP_CAROLIEiJ_G0015793) #12	Nav3 (MGP_CAROLIEiJ_G0015792) #14	Syt1 (MGP_CAROLIEiJ_G0015791) #15	MGP_CAROLIEiJ_G0015790 #16	Ppp1r12a (MGP_CAROLIEiJ_G0015789) #17	Otogl (MGP_CAROLIEiJ_G0015788) #19	Ptprq (MGP_CAROLIEiJ_G0015787) #20	Myf6 (MGP_CAROLIEiJ_G0015786) #21	Myf5 (MGP_CAROLIEiJ_G0015785) #22	Lin7a (MGP_CAROLIEiJ_G0015784) #23	Acss3 (MGP_CAROLIEiJ_G0015783) #24	Ppfia2 (MGP_CAROLIEiJ_G0015782) #25	Ccdc59 (MGP_CAROLIEiJ_G0015781) #27	Mettl25 (MGP_CAROLIEiJ_G0015780) #28	Tmtc2 (MGP_CAROLIEiJ_G0015779) #29	Slc6a15 (MGP_CAROLIEiJ_G0015778)	MGP_CAROLIEiJ_G0015777	Alx1 (MGP_CAROLIEiJ_G0015776)	Rassf9 (MGP_CAROLIEiJ_G0015775)	Nts (MGP_CAROLIEiJ_G0015774)	Mgat4c (MGP_CAROLIEiJ_G0015773)	1700017N19Rik (MGP_CAROLIEiJ_G0015772)	4930430F08Rik (MGP_CAROLIEiJ_G0015771)	Cep290 (MGP_CAROLIEiJ_G0015770)
Shrew mouse	MODERN SPECIES	22	Krr1 (MGP_PahariEiJ_G0031287)	Phlda1 (MGP_PahariEiJ_G0031288)	MGP_PahariEiJ_G0031289	Bbs10 (MGP_PahariEiJ_G0031290) #8	Osbpl8 (MGP_PahariEiJ_G0031291) #9	Zdhhc17 (MGP_PahariEiJ_G0031292) #10	Csrp2 (MGP_PahariEiJ_G0031293) #11	E2f7 (MGP_PahariEiJ_G0031294) #12	MGP_PahariEiJ_G0031295 #14	Syt1 (MGP_PahariEiJ_G0031296) #15	Pawr (MGP_PahariEiJ_G0031297) #16	Ppp1r12a (MGP_PahariEiJ_G0031298) #17	MGP_PahariEiJ_G0031299 #19	Ptprq (MGP_PahariEiJ_G0031300) #20	Myf6 (MGP_PahariEiJ_G0031301) #21	Myf5 (MGP_PahariEiJ_G0031302) #22	Lin7a (MGP_PahariEiJ_G0031303) #23	Acss3 (MGP_PahariEiJ_G0031304) #24	Ppfia2 (MGP_PahariEiJ_G0031305) #25	Ccdc59 (MGP_PahariEiJ_G0031306) #27	Mettl25 (MGP_PahariEiJ_G0031307) #28	Tmtc2 (MGP_PahariEiJ_G0031308) #29	Slc6a15 (MGP_PahariEiJ_G0031309)	MGP_PahariEiJ_G0031310	Alx1 (MGP_PahariEiJ_G0031311)	Rassf9 (MGP_PahariEiJ_G0031312)	Nts (MGP_PahariEiJ_G0031313)	Mgat4c (MGP_PahariEiJ_G0031314)	1700017N19Rik (MGP_PahariEiJ_G0031315)	4930430F08Rik (MGP_PahariEiJ_G0031316)	Cep290 (MGP_PahariEiJ_G0031317)
Rat	MODERN SPECIES	17	Nap1l1 (ENSRNOG00000003890)	Bbs10 (ENSRNOG00000026913) #8	ENSRNOG00000062798 #13	Osbpl8 (ENSRNOG00000026962) #9	Zdhhc17 (ENSRNOG00000003803) #10	Csrp2 (ENSRNOG00000003772) #11	E2f7 (ENSRNOG00000026252) #12	Nav3 (ENSRNOG00000052157) #14	Brcc3dc (ENSRNOG00000070196)	Syt1 (ENSRNOG00000006426) #15	Pawr (ENSRNOG00000005917) #16	Ppp1r12a (ENSRNOG00000004925) #17	Otogl (ENSRNOG00000030316) #19	Ptprq (ENSRNOG00000056915) #20	Myf6 (ENSRNOG00000004878) #21	Myf5 (ENSRNOG00000004768) #22	Lin7a (ENSRNOG00000004527) #23	Acss3 (ENSRNOG00000004448) #24	Ppfia2 (ENSRNOG00000004353) #25	ENSRNOG00000063471	Ccdc59 (ENSRNOG00000004183) #27	Mettl25 (ENSRNOG00000027451) #28	Tmtc2 (ENSRNOG00000004585) #29	Slc6a15 (ENSRNOG00000027468)	Lrriq1 (ENSRNOG00000004564)	Alx1 (ENSRNOG00000004390)	Rassf9 (ENSRNOG00000038574)	Nts (ENSRNOG00000004179)	Mgat4c (ENSRNOG00000004149)	AABR07056845.1 (ENSRNOG00000023762)	LOC500827 (ENSRNOG00000051928)
Lesser Egyptian jerboa	MODERN SPECIES	42	Bbs10 (ENSJJAG00000023405) #8	Osbpl8 (ENSJJAG00000024252) #9	ENSJJAG00000011419 #10	ENSJJAG00000014135 #11	ENSJJAG00000005723	E2f7 (ENSJJAG00000007878) #12	ENSJJAG00000010552	Nav3 (ENSJJAG00000012332) #14	ENSJJAG00000022372	Syt1 (ENSJJAG00000023399) #15	Pawr (ENSJJAG00000018666) #16	Ppp1r12a (ENSJJAG00000023796) #17	Otogl (ENSJJAG00000019493) #19	Ptprq (ENSJJAG00000017741) #20	Myf6 (ENSJJAG00000011250) #21	Myf5 (ENSJJAG00000003407) #22	Lin7a (ENSJJAG00000023503) #23	Acss3 (ENSJJAG00000008308) #24	Ppfia2 (ENSJJAG00000006298) #25	ENSJJAG00000003779	Ccdc59 (ENSJJAG00000015263) #27	Mettl25 (ENSJJAG00000023860) #28	Tmtc2 (ENSJJAG00000016641) #29	Slc6a15 (ENSJJAG00000006373)	Alx1 (ENSJJAG00000006817)	ENSJJAG00000002806	Rassf9 (ENSJJAG00000013251)	Nts (ENSJJAG00000014653)	Mgat4c (ENSJJAG00000021989)	1700017N19Rik (ENSJJAG00000023823)	4930430F08Rik (ENSJJAG00000013569)
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000023399	Phlda1 (ENSDORG00000027757)	Nap1l1 (ENSDORG00000029138)	Bbs10 (ENSDORG00000000668) #8	Osbpl8 (ENSDORG00000000670) #9	Zdhhc17 (ENSDORG00000012435) #10	Csrp2 (ENSDORG00000012441) #11	ENSDORG00000026154 #12	Nav3 (ENSDORG00000011080) #14	Syt1 (ENSDORG00000003724) #15	Pawr (ENSDORG00000029489) #16	Ppp1r12a (ENSDORG00000007157) #17	Otogl (ENSDORG00000028677) #19	Ptprq (ENSDORG00000023208) #20	Myf6 (ENSDORG00000015435) #21	Myf5 (ENSDORG00000015437) #22	Lin7a (ENSDORG00000014355) #23	Acss3 (ENSDORG00000007288) #24	Ppfia2 (ENSDORG00000007289) #25	Mettl25 (ENSDORG00000003006) #28	Tmtc2 (ENSDORG00000005875) #29	Slc6a15 (ENSDORG00000000388)	ENSDORG00000008703	ENSDORG00000011012	Alx1 (ENSDORG00000011021)	Rassf9 (ENSDORG00000029782)	Nts (ENSDORG00000016284)	Mgat4c (ENSDORG00000025545)	1700017N19Rik (ENSDORG00000015892)	4930430F08Rik (ENSDORG00000015893)	Cep290 (ENSDORG00000015894)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Marmotini	ANCESTRAL SPECIES	4	ENSGT00390000018775.ab	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00390000009130.a.a.b.h	ENSGT00920000149095.b
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00390000018775.ab	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00390000009130.a.a.b.h	ENSGT00920000149095.b
Arctic ground squirrel	MODERN SPECIES	89														PTPRQ (ENSUPAG00010013494) #20	MYF6 (ENSUPAG00010013483) #21	MYF5 (ENSUPAG00010013472) #22	LIN7A (ENSUPAG00010013458) #23	ACSS3 (ENSUPAG00010013440) #24	PPFIA2 (ENSUPAG00010013381) #25	CCDC59 (ENSUPAG00010013356) #27	METTL25 (ENSUPAG00010013340) #28	TMTC2 (ENSUPAG00010013331) #29	ENSUPAG00010013316	SLC6A15 (ENSUPAG00010013281)	TSPAN19 (ENSUPAG00010013269)	ENSUPAG00010013204	ALX1 (ENSUPAG00010013178)	RASSF9 (ENSUPAG00010013163)	NTS (ENSUPAG00010013159)	MGAT4C (ENSUPAG00010013143)
Squirrel	MODERN SPECIES	298										SYT1 (ENSSTOG00000022817) #15	PAWR (ENSSTOG00000015765) #16	PPP1R12A (ENSSTOG00000011329) #17	OTOGL (ENSSTOG00000019523) #19	PTPRQ (ENSSTOG00000024058) #20	MYF6 (ENSSTOG00000015808) #21	MYF5 (ENSSTOG00000015810) #22	LIN7A (ENSSTOG00000015812) #23	ACSS3 (ENSSTOG00000013956) #24	PPFIA2 (ENSSTOG00000013971) #25
Alpin marmot	MODERN SPECIES	11	GLIPR1 (ENSMMMG00000002546)	KRR1 (ENSMMMG00000002493)	PHLDA1 (ENSMMMG00000002474)	ENSMMMG00000002289	BBS10 (ENSMMMG00000002273) #8	OSBPL8 (ENSMMMG00000002240) #9	ZDHHC17 (ENSMMMG00000002185) #10	ENSMMMG00000002164 #11	E2F7 (ENSMMMG00000002119) #12	NAV3 (ENSMMMG00000002035) #14	SYT1 (ENSMMMG00000001991) #15	PPP1R12A (ENSMMMG00000001751) #17	OTOGL (ENSMMMG00000001599) #19	PTPRQ (ENSMMMG00000001485) #20	MYF6 (ENSMMMG00000001463) #21	MYF5 (ENSMMMG00000001446) #22	LIN7A (ENSMMMG00000001429) #23	ACSS3 (ENSMMMG00000001391) #24	PPFIA2 (ENSMMMG00000001244) #25	CCDC59 (ENSMMMG00000001213) #27	METTL25 (ENSMMMG00000001158) #28	TMTC2 (ENSMMMG00000001120) #29	ENSMMMG00000001090	SLC6A15 (ENSMMMG00000001050)	TSPAN19 (ENSMMMG00000001031)	LRRIQ1 (ENSMMMG00000000979)	ALX1 (ENSMMMG00000000949)	NTS (ENSMMMG00000000924)	MGAT4C (ENSMMMG00000000872)	ENSMMMG00000000843	ENSMMMG00000000830
Eurasian red squirrel	MODERN SPECIES	14	NAP1L1 (ENSSVLG00005023160)	BBS10 (ENSSVLG00005023257) #8	ENSSVLG00005023266	OSBPL8 (ENSSVLG00005023307) #9	ZDHHC17 (ENSSVLG00005023480) #10	ENSSVLG00005023521 #11	E2F7 (ENSSVLG00005023615) #12	ENSSVLG00005023728	NAV3 (ENSSVLG00005023837) #14	SYT1 (ENSSVLG00005024299) #15	PAWR (ENSSVLG00005024360) #16	PPP1R12A (ENSSVLG00005024407) #17	OTOGL (ENSSVLG00005024601) #19	PTPRQ (ENSSVLG00005025041) #20	MYF6 (ENSSVLG00005025222) #21	MYF5 (ENSSVLG00005025239) #22	LIN7A (ENSSVLG00005025250) #23	BLVRB (ENSSVLG00005025266)	ACSS3 (ENSSVLG00005000239) #24	PPFIA2 (ENSSVLG00005001201) #25	CCDC59 (ENSSVLG00005002316) #27	METTL25 (ENSSVLG00005002343) #28	TMTC2 (ENSSVLG00005002395) #29	SLC6A15 (ENSSVLG00005002476)	TSPAN19 (ENSSVLG00005002560)	LRRIQ1 (ENSSVLG00005002609)	ALX1 (ENSSVLG00005002747)	RASSF9 (ENSSVLG00005002780)	NTS (ENSSVLG00005002800)	MGAT4C (ENSSVLG00005002827)	ENSSVLG00005002860
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Guinea pig	MODERN SPECIES	9	KRR1 (ENSCPOG00000014353)	PHLDA1 (ENSCPOG00000003245)	NAP1L1 (ENSCPOG00000019420)	BBS10 (ENSCPOG00000038158) #8	OSBPL8 (ENSCPOG00000001130) #9	ZDHHC17 (ENSCPOG00000012534) #10	CSRP2 (ENSCPOG00000031460) #11	E2F7 (ENSCPOG00000007375) #12	NAV3 (ENSCPOG00000015431) #14	SYT1 (ENSCPOG00000002054) #15	PAWR (ENSCPOG00000002469) #16	PPP1R12A (ENSCPOG00000004019) #17	OTOGL (ENSCPOG00000022231) #19	PTPRQ (ENSCPOG00000031105) #20	MYF6 (ENSCPOG00000030745) #21	MYF5 (ENSCPOG00000007766) #22	LIN7A (ENSCPOG00000001373) #23	ACSS3 (ENSCPOG00000003451) #24	PPFIA2 (ENSCPOG00000003459) #25	CCDC59 (ENSCPOG00000036718) #27	METTL25 (ENSCPOG00000011621) #28	TMTC2 (ENSCPOG00000005425) #29	SLC6A15 (ENSCPOG00000003103)	ENSCPOG00000022026	ALX1 (ENSCPOG00000027131)	ENSCPOG00000040399	RASSF9 (ENSCPOG00000030989)	NTS (ENSCPOG00000006576)	MGAT4C (ENSCPOG00000013992)	C12orf50 (ENSCPOG00000012468)	C12orf29 (ENSCPOG00000039127)
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938	ENSGT00730000111039.C
Long-tailed chinchilla	MODERN SPECIES	112	ENSCLAG00000005333	BBS10 (ENSCLAG00000007902) #8	OSBPL8 (ENSCLAG00000010204) #9	ENSCLAG00000017859	ZDHHC17 (ENSCLAG00000011124) #10	CSRP2 (ENSCLAG00000008899) #11	E2F7 (ENSCLAG00000007164) #12	NAV3 (ENSCLAG00000012036) #14	ENSCLAG00000005685	SYT1 (ENSCLAG00000004862) #15	PAWR (ENSCLAG00000008196) #16	PPP1R12A (ENSCLAG00000006399) #17	OTOGL (ENSCLAG00000006526) #19	PTPRQ (ENSCLAG00000012232) #20	MYF6 (ENSCLAG00000013875) #21	MYF5 (ENSCLAG00000014410) #22	ENSCLAG00000013764 #23	ACSS3 (ENSCLAG00000005808) #24	PPFIA2 (ENSCLAG00000008120) #25	CCDC59 (ENSCLAG00000015050) #27	METTL25 (ENSCLAG00000014989) #28	TMTC2 (ENSCLAG00000008519) #29	SLC6A15 (ENSCLAG00000009597)	LRRIQ1 (ENSCLAG00000007042)	ALX1 (ENSCLAG00000007151)	RASSF9 (ENSCLAG00000007610)	NTS (ENSCLAG00000007844)	MGAT4C (ENSCLAG00000008726)	C12orf50 (ENSCLAG00000006991)	C12orf29 (ENSCLAG00000004653)	CEP290 (ENSCLAG00000006047)
Degu	MODERN SPECIES	45	OSBPL8 (ENSODEG00000007618) #9	ENSODEG00000007367	ZDHHC17 (ENSODEG00000010670) #10	CSRP2 (ENSODEG00000008449) #11	ENSODEG00000008575 #12	NAV3 (ENSODEG00000010398) #14	ENSODEG00000007970	SYT1 (ENSODEG00000008387) #15	ENSODEG00000007440	PAWR (ENSODEG00000008160) #16	ENSODEG00000019636	PPP1R12A (ENSODEG00000009363) #17	OTOGL (ENSODEG00000007895) #19	PTPRQ (ENSODEG00000007761) #20	MYF6 (ENSODEG00000007305) #21	MYF5 (ENSODEG00000007510) #22	LIN7A (ENSODEG00000007832) #23	ENSODEG00000019454	ACSS3 (ENSODEG00000007503) #24	PPFIA2 (ENSODEG00000007419) #25	CCDC59 (ENSODEG00000009427) #27	METTL25 (ENSODEG00000010203) #28	TMTC2 (ENSODEG00000007730) #29	ENSODEG00000009267	ENSODEG00000009875	SLC6A15 (ENSODEG00000007508)	ENSODEG00000007801	ALX1 (ENSODEG00000008008)	RASSF9 (ENSODEG00000008024)	NTS (ENSODEG00000008426)	MGAT4C (ENSODEG00000011210)
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000044176	ENSHGLG00000004489	ENSHGLG00000009233 #10	ENSHGLG00000008206 #11	E2F7 (ENSHGLG00000006491) #12	NAV3 (ENSHGLG00000012083) #14	ENSHGLG00000010015	ENSHGLG00000042592	SYT1 (ENSHGLG00000047548) #15	PAWR (ENSHGLG00000017940) #16	ENSHGLG00000036431	PPP1R12A (ENSHGLG00000014201) #17	OTOGL (ENSHGLG00000013295) #19	PTPRQ (ENSHGLG00000011762) #20	MYF6 (ENSHGLG00000003419) #21	MYF5 (ENSHGLG00000003654) #22	ENSHGLG00000003757 #23	ACSS3 (ENSHGLG00000004579) #24	PPFIA2 (ENSHGLG00000000429) #25	ENSHGLG00000036317	CCDC59 (ENSHGLG00000001711) #27	METTL25 (ENSHGLG00000038393) #28	TMTC2 (ENSHGLG00000000320) #29	ENSHGLG00000018244	ENSHGLG00000000758	ENSHGLG00000000965	LRRIQ1 (ENSHGLG00000000302)	ALX1 (ENSHGLG00000000937)	ENSHGLG00000036253	RASSF9 (ENSHGLG00000034316)	NTS (ENSHGLG00000001320)
Lagomorpha	ANCESTRAL SPECIES	113	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Rabbit	MODERN SPECIES	15	ENSOCUG00000028124	ZDHHC17 (ENSOCUG00000010401) #10	ENSOCUG00000027238	ENSOCUG00000008330 #11	E2F7 (ENSOCUG00000004932) #12	ENSOCUG00000025947	NAV3 (ENSOCUG00000004936) #14	ENSOCUG00000005148	SYT1 (ENSOCUG00000014829) #15	PAWR (ENSOCUG00000013722) #16	PPP1R12A (ENSOCUG00000016701) #17	ENSOCUG00000037584	OTOGL (ENSOCUG00000014963) #19	PTPRQ (ENSOCUG00000011455) #20	MYF6 (ENSOCUG00000001457) #21	MYF5 (ENSOCUG00000025477) #22	LIN7A (ENSOCUG00000004203) #23	ACSS3 (ENSOCUG00000015752) #24	PPFIA2 (ENSOCUG00000015770) #25	ENSOCUG00000036764	CCDC59 (ENSOCUG00000017824) #27	METTL25 (ENSOCUG00000017825) #28	TMTC2 (ENSOCUG00000017847) #29	SLC6A15 (ENSOCUG00000014066)	TSPAN19 (ENSOCUG00000037319)	ENSOCUG00000034706	LRRIQ1 (ENSOCUG00000017527)	ALX1 (ENSOCUG00000009125)	ENSOCUG00000036577	RASSF9 (ENSOCUG00000017872)	NTS (ENSOCUG00000010336)
Pika	MODERN SPECIES	1627														ENSOPRG00000008989 #20	MYF6 (ENSOPRG00000008999) #21	MYF5 (ENSOPRG00000009007) #22	LIN7A (ENSOPRG00000009017) #23
Tree shrew	MODERN SPECIES	370															MYF6 (ENSTBEG00000007822) #21	MYF5 (ENSTBEG00000008363) #22
Primates	ANCESTRAL SPECIES	6	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546.c #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546.c #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546.c #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b	ENSGT00920000149095.b
Gorilla	MODERN SPECIES	3	ZDHHC17 (ENSGGOG00000023287) #10	ENSGGOG00000039704 #11	ENSGGOG00000041578 #11	ENSGGOG00000038839	E2F7 (ENSGGOG00000012645) #12	NAV3 (ENSGGOG00000006574) #14	ENSGGOG00000002908	SYT1 (ENSGGOG00000024224) #15	ENSGGOG00000022534	PAWR (ENSGGOG00000010093) #16	PPP1R12A (ENSGGOG00000014574) #17	ENSGGOG00000025286	ENSGGOG00000015088 #19	PTPRQ (ENSGGOG00000011494) #20	MYF6 (ENSGGOG00000004369) #21	MYF5 (ENSGGOG00000004366) #22	LIN7A (ENSGGOG00000038053) #23	ACSS3 (ENSGGOG00000010105) #24	PPFIA2 (ENSGGOG00000026460) #25	CCDC59 (ENSGGOG00000025296) #27	METTL25 (ENSGGOG00000023239) #28	TMTC2 (ENSGGOG00000028180) #29	ENSGGOG00000025311	SLC6A15 (ENSGGOG00000010440)	TSPAN19 (ENSGGOG00000022316)	LRRIQ1 (ENSGGOG00000010081)	ALX1 (ENSGGOG00000000168)	RASSF9 (ENSGGOG00000028426)	NTS (ENSGGOG00000010239)	MGAT4C (ENSGGOG00000015293)	ENSGGOG00000025144
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546.c #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b	ENSGT00920000149095.b
Pan	ANCESTRAL SPECIES	4	ENSGT00940000156622 #9	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000154389.b.e	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546.c #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b	ENSGT00920000149095.b
Chimpanzee	MODERN SPECIES	3	ZDHHC17 (ENSPTRG00000005243) #10	CSRP2 (ENSPTRG00000005244) #11	ENSPTRG00000051009	E2F7 (ENSPTRG00000005245) #12	NAV3 (ENSPTRG00000005247) #14	ENSPTRG00000046920	ENSPTRG00000044151	ENSPTRG00000050322	SYT1 (ENSPTRG00000024064) #15	PAWR (ENSPTRG00000005250) #16	PPP1R12A (ENSPTRG00000005252) #17	ENSPTRG00000045837	OTOGL (ENSPTRG00000005257) #19	PTPRQ (ENSPTRG00000039205) #20	MYF6 (ENSPTRG00000005260) #21	MYF5 (ENSPTRG00000005261) #22	LIN7A (ENSPTRG00000005262) #23	ACSS3 (ENSPTRG00000005263) #24	PPFIA2 (ENSPTRG00000005265) #25	CCDC59 (ENSPTRG00000005266) #27	METTL25 (ENSPTRG00000005267) #28	TMTC2 (ENSPTRG00000005268) #29	SLC6A15 (ENSPTRG00000005269)	TSPAN19 (ENSPTRG00000040421)	LRRIQ1 (ENSPTRG00000005271)	ALX1 (ENSPTRG00000005272)	RASSF9 (ENSPTRG00000005273)	NTS (ENSPTRG00000005274)	MGAT4C (ENSPTRG00000045901)	ENSPTRG00000044899	C12H12orf50 (ENSPTRG00000005276)
Bonobo	MODERN SPECIES	3	OSBPL8 (ENSPPAG00000043423) #9	ENSPPAG00000040481	ZDHHC17 (ENSPPAG00000030097) #10	ENSPPAG00000042089 #11	ENSPPAG00000042681	E2F7 (ENSPPAG00000002532) #12	NAV3 (ENSPPAG00000036134) #14	ENSPPAG00000015674	ENSPPAG00000028521	SYT1 (ENSPPAG00000029261) #15	PAWR (ENSPPAG00000043711) #16	PPP1R12A (ENSPPAG00000030740) #17	OTOGL (ENSPPAG00000014085) #19	PTPRQ (ENSPPAG00000000830) #20	MYF6 (ENSPPAG00000032290) #21	MYF5 (ENSPPAG00000028699) #22	LIN7A (ENSPPAG00000026771) #23	ACSS3 (ENSPPAG00000040977) #24	PPFIA2 (ENSPPAG00000033118) #25	CCDC59 (ENSPPAG00000030113) #27	METTL25 (ENSPPAG00000028130) #28	TMTC2 (ENSPPAG00000043706) #29	SLC6A15 (ENSPPAG00000043054)	TSPAN19 (ENSPPAG00000042222)	LRRIQ1 (ENSPPAG00000029539)	ALX1 (ENSPPAG00000034056)	RASSF9 (ENSPPAG00000019366)	NTS (ENSPPAG00000032540)	MGAT4C (ENSPPAG00000031798)	ENSPPAG00000020965	ENSPPAG00000043288
Human	MODERN SPECIES	3	KRR1 (ENSG00000111615)	PHLDA1 (ENSG00000139289)	NAP1L1 (ENSG00000187109)	BBS10 (ENSG00000179941) #8	OSBPL8 (ENSG00000091039) #9	ZDHHC17 (ENSG00000186908) #10	CSRP2 (ENSG00000175183) #11	E2F7 (ENSG00000165891) #12	NAV3 (ENSG00000067798) #14	SYT1 (ENSG00000067715) #15	PAWR (ENSG00000177425) #16	PPP1R12A (ENSG00000058272) #17	OTOGL (ENSG00000165899) #19	PTPRQ (ENSG00000139304) #20	MYF6 (ENSG00000111046) #21	MYF5 (ENSG00000111049) #22	LIN7A (ENSG00000111052) #23	ACSS3 (ENSG00000111058) #24	PPFIA2 (ENSG00000139220) #25	CCDC59 (ENSG00000133773) #27	METTL25 (ENSG00000127720) #28	TMTC2 (ENSG00000179104) #29	SLC6A15 (ENSG00000072041)	TSPAN19 (ENSG00000231738)	LRRIQ1 (ENSG00000133640)	ALX1 (ENSG00000180318)	RASSF9 (ENSG00000198774)	NTS (ENSG00000133636)	MGAT4C (ENSG00000182050)	C12orf50 (ENSG00000165805)	C12orf29 (ENSG00000133641)
Orangutan	MODERN SPECIES	3	BBS10 (ENSPPYG00000004787) #8	ENSPPYG00000037353	OSBPL8 (ENSPPYG00000004788) #9	ZDHHC17 (ENSPPYG00000004789) #10	ENSPPYG00000031243 #11	E2F7 (ENSPPYG00000004791) #12	NAV3 (ENSPPYG00000004792) #14	ENSPPYG00000004793	SYT1 (ENSPPYG00000004794) #15	PAWR (ENSPPYG00000004795) #16	ENSPPYG00000025853	PPP1R12A (ENSPPYG00000004796) #17	OTOGL (ENSPPYG00000004797) #19	PTPRQ (ENSPPYG00000041069) #20	MYF6 (ENSPPYG00000004799) #21	MYF5 (ENSPPYG00000004800) #22	LIN7A (ENSPPYG00000039262) #23	ACSS3 (ENSPPYG00000004802) #24	PPFIA2 (ENSPPYG00000004803) #25	CCDC59 (ENSPPYG00000004804) #27	METTL25 (ENSPPYG00000004805) #28	TMTC2 (ENSPPYG00000004806) #29	SLC6A15 (ENSPPYG00000004807)	TSPAN19 (ENSPPYG00000038266)	LRRIQ1 (ENSPPYG00000004808)	RASSF9 (ENSPPYG00000033145)	NTS (ENSPPYG00000004810)	MGAT4C (ENSPPYG00000004811)	C12orf50 (ENSPPYG00000004812)	C12H12orf29 (ENSPPYG00000004813)	CEP290 (ENSPPYG00000004814)
Gibbon	MODERN SPECIES		NAP1L1 (ENSNLEG00000004682)	ENSNLEG00000031630	BBS10 (ENSNLEG00000004748) #8	OSBPL8 (ENSNLEG00000004750) #9	ZDHHC17 (ENSNLEG00000004841) #10	ENSNLEG00000004885 #11	ENSNLEG00000028737	E2F7 (ENSNLEG00000004897) #12	NAV3 (ENSNLEG00000004917) #14	SYT1 (ENSNLEG00000004995) #15	PAWR (ENSNLEG00000005035) #16	PPP1R12A (ENSNLEG00000005041) #17	OTOGL (ENSNLEG00000005115) #19	PTPRQ (ENSNLEG00000005154) #20	MYF6 (ENSNLEG00000032583) #21	MYF5 (ENSNLEG00000005207) #22	LIN7A (ENSNLEG00000032491) #23	ACSS3 (ENSNLEG00000005227) #24	PPFIA2 (ENSNLEG00000005251) #25	CCDC59 (ENSNLEG00000033968) #27	METTL25 (ENSNLEG00000005299) #28	TMTC2 (ENSNLEG00000005311) #29	SLC6A15 (ENSNLEG00000005336)	LRRIQ1 (ENSNLEG00000005358)	ALX1 (ENSNLEG00000005381)	RASSF9 (ENSNLEG00000005386)	NTS (ENSNLEG00000005388)	MGAT4C (ENSNLEG00000005393)	C12orf50 (ENSNLEG00000005395)	C12orf29 (ENSNLEG00000005396)	CEP290 (ENSNLEG00000005417)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000002417 #8	ENSGT00960000192410	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Vervet Monkey	MODERN SPECIES	2	NAP1L1 (ENSCSAG00000004030)	BBS10 (ENSCSAG00000004028) #8	OSBPL8 (ENSCSAG00000004024) #9	ZDHHC17 (ENSCSAG00000004014) #10	CSRP2 (ENSCSAG00000004009) #11	E2F7 (ENSCSAG00000003998) #12	ENSCSAG00000003979 #14	ENSCSAG00000018912	ENSCSAG00000018914	SYT1 (ENSCSAG00000003971) #15	PAWR (ENSCSAG00000003962) #16	PPP1R12A (ENSCSAG00000003956) #17	OTOGL (ENSCSAG00000003939) #19	PTPRQ (ENSCSAG00000003913) #20	MYF6 (ENSCSAG00000003893) #21	MYF5 (ENSCSAG00000003889) #22	LIN7A (ENSCSAG00000003887) #23	ACSS3 (ENSCSAG00000003882) #24	PPFIA2 (ENSCSAG00000003876) #25	ENSCSAG00000003868 #25	CCDC59 (ENSCSAG00000003867) #27	METTL25 (ENSCSAG00000003863) #28	ENSCSAG00000018917	TMTC2 (ENSCSAG00000003860) #29	ENSCSAG00000018919	ENSCSAG00000018921	ENSCSAG00000018923	SLC6A15 (ENSCSAG00000003858)	TSPAN19 (ENSCSAG00000003855)	LRRIQ1 (ENSCSAG00000003850)	ALX1 (ENSCSAG00000003845)
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000156622 #9	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000156622 #9	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00910000147454	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b
Pig-tailed macaque	MODERN SPECIES	517	E2F7 (ENSMNEG00000025875) #12	NAV3 (ENSMNEG00000043424) #14	ENSMNEG00000000985	ENSMNEG00000009689	ENSMNEG00000026858	ENSMNEG00000028899	ENSMNEG00000037055	ENSMNEG00000038165	ENSMNEG00000031657	SYT1 (ENSMNEG00000030551) #15	PAWR (ENSMNEG00000004020) #16	PPP1R12A (ENSMNEG00000033679) #17	OTOGL (ENSMNEG00000034772) #19	PTPRQ (ENSMNEG00000045562) #20	MYF6 (ENSMNEG00000019739) #21	MYF5 (ENSMNEG00000039510) #22	LIN7A (ENSMNEG00000040769) #23	ACSS3 (ENSMNEG00000030423) #24	ENSMNEG00000021297	PPFIA2 (ENSMNEG00000041825) #25	CCDC59 (ENSMNEG00000037462) #27	METTL25 (ENSMNEG00000042500) #28	TMTC2 (ENSMNEG00000028808) #29	ENSMNEG00000032829	SLC6A15 (ENSMNEG00000005563)	TSPAN19 (ENSMNEG00000036225)	LRRIQ1 (ENSMNEG00000037379)	ALX1 (ENSMNEG00000034993)	ENSMNEG00000000984	RASSF9 (ENSMNEG00000033486)	NTS (ENSMNEG00000040065)
Macaca_a	ANCESTRAL SPECIES	6	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT01050000245239.a.a	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b	ENSGT00940000158014 #14	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000153052.c.b.a.a.a.a.b.b.b	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b
Crab-eating macaque	MODERN SPECIES	2	NAV3 (ENSMFAG00000044289) #14	ENSMFAG00000034925	ENSMFAG00000034379	ENSMFAG00000000157	SYT1 (ENSMFAG00000003495) #15	ENSMFAG00000050054	PAWR (ENSMFAG00000062333) #16	ENSMFAG00000063729	ENSMFAG00000049694	PPP1R12A (ENSMFAG00000034239) #17	OTOGL (ENSMFAG00000031786) #19	PTPRQ (ENSMFAG00000044210) #20	ENSMFAG00000052094	ENSMFAG00000058049	MYF6 (ENSMFAG00000033881) #21	MYF5 (ENSMFAG00000042044) #22	LIN7A (ENSMFAG00000040160) #23	ENSMFAG00000031214	ACSS3 (ENSMFAG00000040344) #24	PPFIA2 (ENSMFAG00000031204) #25	ENSMFAG00000049838	CCDC59 (ENSMFAG00000034303) #27	METTL25 (ENSMFAG00000036420) #28	ENSMFAG00000051090	ENSMFAG00000052001	TMTC2 (ENSMFAG00000038030) #29	ENSMFAG00000053756	ENSMFAG00000051138	ENSMFAG00000060580	ENSMFAG00000047713	ENSMFAG00000047900
Rhesus	MODERN SPECIES	2	E2F7 (ENSMMUG00000022846) #12	ENSMMUG00000059985	ENSMMUG00000055171	ENSMMUG00000060140	NAV3 (ENSMMUG00000021329) #14	ENSMMUG00000058640	ENSMMUG00000051304	ENSMMUG00000060137	SYT1 (ENSMMUG00000005530) #15	PAWR (ENSMMUG00000015179) #16	ENSMMUG00000053591	PPP1R12A (ENSMMUG00000019214) #17	OTOGL (ENSMMUG00000000121) #19	PTPRQ (ENSMMUG00000037711) #20	MYF6 (ENSMMUG00000011667) #21	MYF5 (ENSMMUG00000011669) #22	LIN7A (ENSMMUG00000011671) #23	ENSMMUG00000017463	ACSS3 (ENSMMUG00000013800) #24	ENSMMUG00000046323	PPFIA2 (ENSMMUG00000013804) #25	ENSMMUG00000050266	CCDC59 (ENSMMUG00000063005) #27	METTL25 (ENSMMUG00000002514) #28	ENSMMUG00000059068	TMTC2 (ENSMMUG00000011305) #29	ENSMMUG00000043159	ENSMMUG00000058294	SLC6A15 (ENSMMUG00000013650)	TSPAN19 (ENSMMUG00000042255)	LRRIQ1 (ENSMMUG00000016535)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000014818.g.b.a.a.a.b.b	ENSGT00940000153294.m.b.s.f	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c
Olive baboon	MODERN SPECIES	19	ZDHHC17 (ENSPANG00000004050) #10	CSRP2 (ENSPANG00000023047) #11	E2F7 (ENSPANG00000004929) #12	NAV3 (ENSPANG00000007911) #14	ENSPANG00000043139	ENSPANG00000015985	ENSPANG00000040020	SYT1 (ENSPANG00000009048) #15	PAWR (ENSPANG00000009557) #16	PPP1R12A (ENSPANG00000026354) #17	ENSPANG00000047805	OTOGL (ENSPANG00000012907) #19	PTPRQ (ENSPANG00000014456) #20	ENSPANG00000005319	MYF6 (ENSPANG00000044306) #21	MYF5 (ENSPANG00000020394) #22	LIN7A (ENSPANG00000005931) #23	ACSS3 (ENSPANG00000019084) #24	PPFIA2 (ENSPANG00000019704) #25	ENSPANG00000035488	ENSPANG00000042647	ENSPANG00000049322	CCDC59 (ENSPANG00000023011) #27	METTL25 (ENSPANG00000033969) #28	ENSPANG00000032275	TMTC2 (ENSPANG00000008622) #29	ENSPANG00000049628	ENSPANG00000005733	SLC6A15 (ENSPANG00000011238)	LRRIQ1 (ENSPANG00000020393)	TSPAN19 (ENSPANG00000016556)
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000163914.c.a	ENSGT00390000003133.i.a	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000014818.g.b.a.a.a.b.a	ENSGT00940000153294.m.b.s.f	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c
Sooty mangabey	MODERN SPECIES	582	ENSCATG00000039522	ENSCATG00000044128	ZDHHC17 (ENSCATG00000040479) #10	CSRP2 (ENSCATG00000040566) #11	E2F7 (ENSCATG00000035481) #12	NAV3 (ENSCATG00000032040) #14	ENSCATG00000017337	ENSCATG00000040529	ENSCATG00000044466	SYT1 (ENSCATG00000033541) #15	PAWR (ENSCATG00000034935) #16	PPP1R12A (ENSCATG00000038278) #17	OTOGL (ENSCATG00000038125) #19	PTPRQ (ENSCATG00000039610) #20	MYF6 (ENSCATG00000029151) #21	MYF5 (ENSCATG00000042162) #22	LIN7A (ENSCATG00000029939) #23	ACSS3 (ENSCATG00000030914) #24	PPFIA2 (ENSCATG00000040747) #25	ENSCATG00000038856	ENSCATG00000031323	ENSCATG00000034351	CCDC59 (ENSCATG00000044760) #27	METTL25 (ENSCATG00000044852) #28	TMTC2 (ENSCATG00000040764) #29	ENSCATG00000022828	SLC6A15 (ENSCATG00000041025)	TSPAN19 (ENSCATG00000034141)	LRRIQ1 (ENSCATG00000037866)	ALX1 (ENSCATG00000041762)	ENSCATG00000038524
Drill	MODERN SPECIES	1141													OTOGL (ENSMLEG00000040646) #19	PTPRQ (ENSMLEG00000039303) #20	MYF6 (ENSMLEG00000034432) #21	MYF5 (ENSMLEG00000038211) #22	LIN7A (ENSMLEG00000020249) #23	ACSS3 (ENSMLEG00000042153) #24	ENSMLEG00000000975	PPFIA2 (ENSMLEG00000042213) #25
Rhinopithecus	ANCESTRAL SPECIES	603													ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25
Golden snub-nosed monkey	MODERN SPECIES	2447													OTOGL (ENSRROG00000003053) #19	PTPRQ (ENSRROG00000040104) #20	MYF6 (ENSRROG00000040631) #21	MYF5 (ENSRROG00000040728) #22	LIN7A (ENSRROG00000035008) #23	ACSS3 (ENSRROG00000030884) #24	PPFIA2 (ENSRROG00000012213) #25
Black snub-nosed monkey	MODERN SPECIES	485														PTPRQ (ENSRBIG00000036416) #20	MYF6 (ENSRBIG00000034023) #21	MYF5 (ENSRBIG00000011474) #22
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980.u.a.a #11	ENSGT00940000154980.u.a.b #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00910000148286	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b
Cebidae	ANCESTRAL SPECIES	2	ENSGT00910000147072.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980.u.a.a #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980.u.a.a #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00550000074807.d	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00390000008708.o.a	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Capuchin	MODERN SPECIES	156										PAWR (ENSCCAG00000026556) #16	PPP1R12A (ENSCCAG00000027422) #17	ENSCCAG00000033086	OTOGL (ENSCCAG00000019837) #19	PTPRQ (ENSCCAG00000033930) #20	MYF6 (ENSCCAG00000032873) #21	MYF5 (ENSCCAG00000029028) #22	LIN7A (ENSCCAG00000033374) #23	ACSS3 (ENSCCAG00000035103) #24	PPFIA2 (ENSCCAG00000029694) #25	CCDC59 (ENSCCAG00000021997) #27	METTL25 (ENSCCAG00000032764) #28	ENSCCAG00000034003	TMTC2 (ENSCCAG00000037661) #29	ENSCCAG00000032890
Bolivian squirrel monkey	MODERN SPECIES	67	BBS10 (ENSSBOG00000022169) #8	OSBPL8 (ENSSBOG00000030671) #9	ZDHHC17 (ENSSBOG00000036173) #10	ENSSBOG00000014459 #11	E2F7 (ENSSBOG00000028674) #12	NAV3 (ENSSBOG00000036099) #14	ENSSBOG00000036163	ENSSBOG00000025849	SYT1 (ENSSBOG00000033271) #15	PAWR (ENSSBOG00000025731) #16	PPP1R12A (ENSSBOG00000033660) #17	ENSSBOG00000026289	OTOGL (ENSSBOG00000033681) #19	PTPRQ (ENSSBOG00000027538) #20	MYF6 (ENSSBOG00000021822) #21	MYF5 (ENSSBOG00000019536) #22	LIN7A (ENSSBOG00000030034) #23	ENSSBOG00000034028	ENSSBOG00000022040	ACSS3 (ENSSBOG00000018710) #24	PPFIA2 (ENSSBOG00000021244) #25	CCDC59 (ENSSBOG00000029711) #27	METTL25 (ENSSBOG00000025680) #28	ENSSBOG00000025592	TMTC2 (ENSSBOG00000024696) #29	ENSSBOG00000032046	ENSSBOG00000035574	SLC6A15 (ENSSBOG00000036273)	TSPAN19 (ENSSBOG00000018936)	LRRIQ1 (ENSSBOG00000024808)	ALX1 (ENSSBOG00000028789)
Marmoset	MODERN SPECIES	21	ENSCJAG00000078161	BBS10 (ENSCJAG00000001113) #8	OSBPL8 (ENSCJAG00000001055) #9	ZDHHC17 (ENSCJAG00000019075) #10	ENSCJAG00000019153 #11	E2F7 (ENSCJAG00000019162) #12	NAV3 (ENSCJAG00000019176) #14	ENSCJAG00000078124	ENSCJAG00000078194	SYT1 (ENSCJAG00000019262) #15	PAWR (ENSCJAG00000019265) #16	PPP1R12A (ENSCJAG00000019271) #17	OTOGL (ENSCJAG00000019323) #19	PTPRQ (ENSCJAG00000019332) #20	MYF6 (ENSCJAG00000081789) #21	MYF5 (ENSCJAG00000019340) #22	LIN7A (ENSCJAG00000019343) #23	ACSS3 (ENSCJAG00000019352) #24	PPFIA2 (ENSCJAG00000019370) #25	CCDC59 (ENSCJAG00000019396) #27	METTL25 (ENSCJAG00000019400) #28	TMTC2 (ENSCJAG00000019420) #29	ENSCJAG00000073753	ENSCJAG00000081141	ENSCJAG00000086215	SLC6A15 (ENSCJAG00000019425)	TSPAN19 (ENSCJAG00000039345)	LRRIQ1 (ENSCJAG00000019445)	ALX1 (ENSCJAG00000080722)	ENSCJAG00000085601	EEA1 (ENSCJAG00000019460)
Mas night monkey	MODERN SPECIES	833	ENSANAG00000028981	ENSANAG00000021237 #11	E2F7 (ENSANAG00000036545) #12	ENSANAG00000032226	NAV3 (ENSANAG00000037686) #14	ENSANAG00000023582	ENSANAG00000023157	SYT1 (ENSANAG00000025826) #15	PAWR (ENSANAG00000022396) #16	PPP1R12A (ENSANAG00000034824) #17	ENSANAG00000019658	ENSANAG00000036662	OTOGL (ENSANAG00000024695) #19	PTPRQ (ENSANAG00000035871) #20	MYF6 (ENSANAG00000024892) #21	MYF5 (ENSANAG00000023208) #22	LIN7A (ENSANAG00000032889) #23	ACSS3 (ENSANAG00000034361) #24	PPFIA2 (ENSANAG00000023020) #25	CCDC59 (ENSANAG00000033505) #27	METTL25 (ENSANAG00000035794) #28	TMTC2 (ENSANAG00000036537) #29	ENSANAG00000022029	SLC6A15 (ENSANAG00000025270)	ENSANAG00000032039	TSPAN19 (ENSANAG00000013117)	LRRIQ1 (ENSANAG00000027300)	ALX1 (ENSANAG00000031059)	RASSF9 (ENSANAG00000030253)	NTS (ENSANAG00000030448)	MGAT4C (ENSANAG00000037245)
Tarsier	MODERN SPECIES	4455												OTOGL (ENSTSYG00000036620) #19	ENSTSYG00000026335	PTPRQ (ENSTSYG00000027505) #20	MYF6 (ENSTSYG00000003275) #21	MYF5 (ENSTSYG00000003282) #22	ENSTSYG00000010879 #23
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394.b #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417 #8	ENSGT00940000156622 #9	ENSGT00530000063074.b.b #10	ENSGT00940000154980 #11	ENSGT00940000157713 #12	ENSGT00940000158014 #14	ENSGT00940000155394.b #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00920000149095.b	ENSGT00500000044938
Lemuriformes_a	ANCESTRAL SPECIES	190										ENSGT00940000155394.b #15	ENSGT00390000000406 #16	ENSGT00940000156120.a #17	ENSGT00940000160698 #19	ENSGT00940000159215 #20	ENSGT00950000182959.a.b.b.a #21	ENSGT00950000182959.a.a #22	ENSGT00940000153222.a.a #23	ENSGT00940000157479 #24	ENSGT01050000244900.a.a.a.a.b #25	ENSGT00390000006546 #27	ENSGT00530000063745.b #28	ENSGT00940000156144 #29	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Coquerels sifaka	MODERN SPECIES	654	SAT1 (ENSPCOG00000022263)	ACOT9 (ENSPCOG00000017631)	PRDX4 (ENSPCOG00000021645)	PTCHD1 (ENSPCOG00000010244)	PHEX (ENSPCOG00000025455)	ENSPCOG00000017400	MBTPS2 (ENSPCOG00000008143)	SMPX (ENSPCOG00000025800)	CNKSR2 (ENSPCOG00000014884)	SYT1 (ENSPCOG00000025512) #15	PAWR (ENSPCOG00000018957) #16	PPP1R12A (ENSPCOG00000018987) #17	OTOGL (ENSPCOG00000027646) #19	PTPRQ (ENSPCOG00000012150) #20	MYF6 (ENSPCOG00000021756) #21	MYF5 (ENSPCOG00000012709) #22
Greater bamboo lemur	MODERN SPECIES	95						PANK3 (ENSPSMG00000017197)	ENSPSMG00000017175	CPEB4 (ENSPSMG00000017067)	ENSPSMG00000016953	SYT1 (ENSPSMG00000016943) #15	PAWR (ENSPSMG00000016915) #16	PPP1R12A (ENSPSMG00000016837) #17	OTOGL (ENSPSMG00000016582) #19	PTPRQ (ENSPSMG00000016269) #20	MYF6 (ENSPSMG00000016092) #21	MYF5 (ENSPSMG00000016083) #22	LIN7A (ENSPSMG00000016071) #23	ACSS3 (ENSPSMG00000016037) #24	PPFIA2 (ENSPSMG00000015931) #25	CCDC59 (ENSPSMG00000015532) #27	METTL25 (ENSPSMG00000015523) #28	TMTC2 (ENSPSMG00000015469) #29	SLC6A15 (ENSPSMG00000015347)	TSPAN19 (ENSPSMG00000015246)	LRRIQ1 (ENSPSMG00000015231)
Mouse lemur	MODERN SPECIES	29	BBS10 (ENSMICG00000042947) #8	OSBPL8 (ENSMICG00000000969) #9	ENSMICG00000029525	ZDHHC17 (ENSMICG00000033453) #10	CSRP2 (ENSMICG00000047076) #11	ENSMICG00000014368	E2F7 (ENSMICG00000013872) #12	NAV3 (ENSMICG00000003403) #14	SYT1 (ENSMICG00000015517) #15	PAWR (ENSMICG00000031649) #16	ENSMICG00000032513	PPP1R12A (ENSMICG00000032335) #17	OTOGL (ENSMICG00000026871) #19	PTPRQ (ENSMICG00000038737) #20	MYF6 (ENSMICG00000004274) #21	MYF5 (ENSMICG00000036139) #22	LIN7A (ENSMICG00000033894) #23	ACSS3 (ENSMICG00000010809) #24	PPFIA2 (ENSMICG00000010822) #25	CCDC59 (ENSMICG00000041747) #27	METTL25 (ENSMICG00000027175) #28	TMTC2 (ENSMICG00000031682) #29	SLC6A15 (ENSMICG00000026324)	TSPAN19 (ENSMICG00000038361)	LRRIQ1 (ENSMICG00000037929)	ALX1 (ENSMICG00000032710)	RASSF9 (ENSMICG00000042014)	NTS (ENSMICG00000037863)	MGAT4C (ENSMICG00000037297)	ENSMICG00000034439	ENSMICG00000035359
Bushbaby	MODERN SPECIES	122	PHLDA1 (ENSOGAG00000010317)	NAP1L1 (ENSOGAG00000010319)	BBS10 (ENSOGAG00000025855) #8	OSBPL8 (ENSOGAG00000017084) #9	ZDHHC17 (ENSOGAG00000013994) #10	CSRP2 (ENSOGAG00000013999) #11	E2F7 (ENSOGAG00000010821) #12	ENSOGAG00000030290	NAV3 (ENSOGAG00000010604) #14	SYT1 (ENSOGAG00000009943) #15	PAWR (ENSOGAG00000027944) #16	PPP1R12A (ENSOGAG00000010740) #17	OTOGL (ENSOGAG00000030466) #19	PTPRQ (ENSOGAG00000025362) #20	MYF6 (ENSOGAG00000001038) #21	MYF5 (ENSOGAG00000001039) #22	LIN7A (ENSOGAG00000004616) #23	ACSS3 (ENSOGAG00000014813) #24	PPFIA2 (ENSOGAG00000014823) #25	ENSOGAG00000025088	CCDC59 (ENSOGAG00000004383) #27	METTL25 (ENSOGAG00000004384) #28	TMTC2 (ENSOGAG00000000477) #29	SLC6A15 (ENSOGAG00000014207)	LRRIQ1 (ENSOGAG00000014209)	ALX1 (ENSOGAG00000014211)	RASSF9 (ENSOGAG00000003208)	NTS (ENSOGAG00000003210)	MGAT4C (ENSOGAG00000003212)	ENSOGAG00000032440	ENSOGAG00000034474