Sarcopterygii	ANCESTRAL SPECIES	219														ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000011619 #29	ENSGT00940000158454 #28	ENSGT00940000165573	ENSGT00940000160086 #27	ENSGT00940000166800	ENSGT00940000158533 #26	ENSGT00940000157026 #25
Tetrapoda	ANCESTRAL SPECIES	142												ENSGT00940000158279 #19	ENSGT00940000159742	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000011619 #29	ENSGT00940000158454 #28	ENSGT00940000165573	ENSGT00940000160086 #27	ENSGT00940000166800	ENSGT00940000158533 #26
Amniota	ANCESTRAL SPECIES	71											ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000162081
Mammalia	ANCESTRAL SPECIES	4	ENSGT00940000162364	ENSGT00940000161885	ENSGT00940000161603	ENSGT00940000155153.A	ENSGT00450000040324.a	ENSGT01030000234607.A.a.b.a	ENSGT00940000161501	ENSGT00390000016168.a	ENSGT00940000158053	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000164845	ENSGT00940000161305 #35
Theria	ANCESTRAL SPECIES		ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT01030000234607.A.a.b.a	ENSGT00940000161501	ENSGT00390000016168.a	ENSGT00940000158053	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829	ENSGT00940000161932
Eutheria	ANCESTRAL SPECIES	14	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Primates	ANCESTRAL SPECIES	1	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Catarrhini	ANCESTRAL SPECIES	2	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00390000005052.e	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00390000005052.e	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00390000005052.e	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Human	MODERN SPECIES	15	TREX1 (ENSG00000213689) #7	ATRIP (ENSG00000164053) #8	TMA7 (ENSG00000232112) #9	CCDC51 (ENSG00000164051) #10	PLXNB1 (ENSG00000164050) #11	FBXW12 (ENSG00000164049) #12	SPINK8 (ENSG00000229453) #13	NME6 (ENSG00000172113) #14	ZNF589 (ENSG00000164048) #15	CAMP (ENSG00000164047) #16	CDC25A (ENSG00000164045) #17	MAP4 (ENSG00000047849) #18	DHX30 (ENSG00000132153) #19	SMARCC1 (ENSG00000173473) #20	CSPG5 (ENSG00000114646) #21	ELP6 (ENSG00000163832) #22	SCAP (ENSG00000114650) #23	PTPN23 (ENSG00000076201) #24	KLHL18 (ENSG00000114648) #25	KIF9 (ENSG00000088727) #26	SETD2 (ENSG00000181555) #27	NBEAL2 (ENSG00000160796) #28	CCDC12 (ENSG00000160799) #29	PTH1R (ENSG00000160801) #30	MYL3 (ENSG00000160808) #31	PRSS50 (ENSG00000283706) #32	ENSG00000206549 #33	TMIE (ENSG00000181585) #34	ALS2CL (ENSG00000178038) #35	FAM240A (ENSG00000283473) #36	TDGF1 (ENSG00000241186) #37
Pan	ANCESTRAL SPECIES	2	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00390000005052.e	ENSGT00940000160737 #17	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.f	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Chimpanzee	MODERN SPECIES	16	PLXNB1 (ENSPTRG00000014884) #11	FBXW12 (ENSPTRG00000014883) #12	SPINK8 (ENSPTRG00000042337) #13	NME6 (ENSPTRG00000014882) #14	ENSPTRG00000044573	ZNF589 (ENSPTRG00000014881) #15	CAMP (ENSPTRG00000014880) #16	ENSPTRG00000050808	CDC25A (ENSPTRG00000014879) #17	ENSPTRG00000049574	MAP4 (ENSPTRG00000014878) #18	DHX30 (ENSPTRG00000014877) #19	ENSPTRG00000048090	SMARCC1 (ENSPTRG00000014875) #20	CSPG5 (ENSPTRG00000014874) #21	ELP6 (ENSPTRG00000014873) #22	SCAP (ENSPTRG00000014872) #23	PTPN23 (ENSPTRG00000014869) #24	KLHL18 (ENSPTRG00000014868) #25	KIF9 (ENSPTRG00000014867) #26	SETD2 (ENSPTRG00000014866) #27	NBEAL2 (ENSPTRG00000014864) #28	CCDC12 (ENSPTRG00000014862) #29	PTH1R (ENSPTRG00000014861) #30	MYL3 (ENSPTRG00000014860) #31	PRSS42 (ENSPTRG00000014859)	PRSS45 (ENSPTRG00000014857)	ENSPTRG00000051285	PRSS50 (ENSPTRG00000030254) #32	TMIE (ENSPTRG00000014856) #34	ALS2CL (ENSPTRG00000014855) #35
Bonobo	MODERN SPECIES	16	CCDC51 (ENSPPAG00000013899) #10	PLXNB1 (ENSPPAG00000038541) #11	ENSPPAG00000026655 #12	SPINK8 (ENSPPAG00000005562) #13	NME6 (ENSPPAG00000036553) #14	ENSPPAG00000027577	ENSPPAG00000027730 #15	CAMP (ENSPPAG00000042262) #16	ENSPPAG00000017036	CDC25A (ENSPPAG00000034700) #17	ENSPPAG00000033774	MAP4 (ENSPPAG00000042257) #18	DHX30 (ENSPPAG00000034330) #19	SMARCC1 (ENSPPAG00000031011) #20	CSPG5 (ENSPPAG00000041716) #21	ELP6 (ENSPPAG00000039928) #22	SCAP (ENSPPAG00000011239) #23	PTPN23 (ENSPPAG00000042499) #24	KLHL18 (ENSPPAG00000026841) #25	KIF9 (ENSPPAG00000040979) #26	SETD2 (ENSPPAG00000027015) #27	NBEAL2 (ENSPPAG00000043702) #28	CCDC12 (ENSPPAG00000028782) #29	PTH1R (ENSPPAG00000036562) #30	MYL3 (ENSPPAG00000038266) #31	ENSPPAG00000042735	ENSPPAG00000024161	ENSPPAG00000038023	PRSS50 (ENSPPAG00000003698) #32	ENSPPAG00000031194 #34	ALS2CL (ENSPPAG00000029581) #35
Gorilla	MODERN SPECIES	16	TMA7 (ENSGGOG00000028044) #9	CCDC51 (ENSGGOG00000006256) #10	PLXNB1 (ENSGGOG00000006231) #11	FBXW12 (ENSGGOG00000022457) #12	SPINK8 (ENSGGOG00000023563) #13	NME6 (ENSGGOG00000042278) #14	ENSGGOG00000041849	ENSGGOG00000006069 #15	CAMP (ENSGGOG00000012414) #16	ENSGGOG00000023682	CDC25A (ENSGGOG00000003912) #17	MAP4 (ENSGGOG00000004315) #18	DHX30 (ENSGGOG00000004307) #19	SMARCC1 (ENSGGOG00000016758) #20	CSPG5 (ENSGGOG00000014842) #21	ELP6 (ENSGGOG00000011003) #22	ENSGGOG00000040892 #23	PTPN23 (ENSGGOG00000003089) #24	KLHL18 (ENSGGOG00000003685) #25	KIF9 (ENSGGOG00000003679) #26	SETD2 (ENSGGOG00000022300) #27	NBEAL2 (ENSGGOG00000009020) #28	CCDC12 (ENSGGOG00000009012) #29	PTH1R (ENSGGOG00000013431) #30	MYL3 (ENSGGOG00000002568) #31	ENSGGOG00000002563	ENSGGOG00000003115	ENSGGOG00000040339	PRSS50 (ENSGGOG00000003111) #32	TMIE (ENSGGOG00000003109) #34	ALS2CL (ENSGGOG00000003098) #35
Orangutan	MODERN SPECIES	16	ATRIP (ENSPPYG00000013904) #8	CCDC51 (ENSPPYG00000013905) #10	ENSPPYG00000034501 #9	PLXNB1 (ENSPPYG00000013906) #11	FBXW12 (ENSPPYG00000013907) #12	SPINK8 (ENSPPYG00000030391) #13	NME6 (ENSPPYG00000013908) #14	ZNF589 (ENSPPYG00000013909) #15	CAMP (ENSPPYG00000013910) #16	CDC25A (ENSPPYG00000013912) #17	MAP4 (ENSPPYG00000013913) #18	DHX30 (ENSPPYG00000013914) #19	SMARCC1 (ENSPPYG00000013915) #20	ENSPPYG00000035559	CSPG5 (ENSPPYG00000013916) #21	ELP6 (ENSPPYG00000013917) #22	SCAP (ENSPPYG00000013918) #23	KLHL18 (ENSPPYG00000013920) #25	KIF9 (ENSPPYG00000013921) #26	SETD2 (ENSPPYG00000013922) #27	NBEAL2 (ENSPPYG00000013923) #28	CCDC12 (ENSPPYG00000013924) #29	PTH1R (ENSPPYG00000013925) #30	MYL3 (ENSPPYG00000013927) #31	ENSPPYG00000038811	ENSPPYG00000038258 #32	TMIE (ENSPPYG00000013929) #34	ALS2CL (ENSPPYG00000013930) #35	FAM240A (ENSPPYG00000040037) #36	ENSPPYG00000032696 #37	LRRC2 (ENSPPYG00000013932)
Gibbon	MODERN SPECIES	19	SHISA5 (ENSNLEG00000006485)	ATRIP (ENSNLEG00000006456) #8	ENSNLEG00000031269 #9	CCDC51 (ENSNLEG00000006454) #10	PLXNB1 (ENSNLEG00000006433) #11	FBXW12 (ENSNLEG00000006422) #12	NME6 (ENSNLEG00000033070) #14	ZNF589 (ENSNLEG00000006411) #15	CAMP (ENSNLEG00000006404) #16	CDC25A (ENSNLEG00000006390) #17	ENSNLEG00000031498	ENSNLEG00000006379	DHX30 (ENSNLEG00000006367) #19	SMARCC1 (ENSNLEG00000006349) #20	ENSNLEG00000006343 #21	ELP6 (ENSNLEG00000035239) #22	SCAP (ENSNLEG00000006316) #23	PTPN23 (ENSNLEG00000006308) #24	KLHL18 (ENSNLEG00000006303) #25	KIF9 (ENSNLEG00000006265) #26	SETD2 (ENSNLEG00000006252) #27	NBEAL2 (ENSNLEG00000006224) #28	CCDC12 (ENSNLEG00000006219) #29	PTH1R (ENSNLEG00000006210) #30	ENSNLEG00000030951 #31	ENSNLEG00000006204	ENSNLEG00000027227	PRSS50 (ENSNLEG00000006194) #32	ENSNLEG00000006190 #34	ALS2CL (ENSNLEG00000006147) #35	FAM240A (ENSNLEG00000035417) #36
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00390000005052.e.b	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Rhinopithecus	ANCESTRAL SPECIES	102				ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00940000166259	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e.b	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Black snub-nosed monkey	MODERN SPECIES	1783					NME6 (ENSRBIG00000035086) #14	ENSRBIG00000041479 #15	ENSRBIG00000029688	CAMP (ENSRBIG00000039302) #16	CDC25A (ENSRBIG00000040039) #17	ENSRBIG00000006915	ENSRBIG00000034725	ENSRBIG00000017193	DHX30 (ENSRBIG00000034012) #19	SMARCC1 (ENSRBIG00000031762) #20	CSPG5 (ENSRBIG00000032882) #21	ELP6 (ENSRBIG00000034727) #22	SCAP (ENSRBIG00000027771) #23	PTPN23 (ENSRBIG00000033504) #24	KLHL18 (ENSRBIG00000034280) #25	KIF9 (ENSRBIG00000028731) #26	SETD2 (ENSRBIG00000038909) #27	NBEAL2 (ENSRBIG00000032380) #28	CCDC12 (ENSRBIG00000039910) #29	PTH1R (ENSRBIG00000032552) #30	MYL3 (ENSRBIG00000035105) #31	ENSRBIG00000027472	ENSRBIG00000035995	ENSRBIG00000017217	ENSRBIG00000041596	PRSS50 (ENSRBIG00000027969) #32	TMIE (ENSRBIG00000034115) #34
Golden snub-nosed monkey	MODERN SPECIES	1809						NME6 (ENSRROG00000029307) #14	ENSRROG00000040233 #15	ENSRROG00000032164	CAMP (ENSRROG00000043613) #16	CDC25A (ENSRROG00000043440) #17	ENSRROG00000006563	MAP4 (ENSRROG00000037614) #18	DHX30 (ENSRROG00000039143) #19	SMARCC1 (ENSRROG00000042272) #20	CSPG5 (ENSRROG00000030383) #21	ELP6 (ENSRROG00000038777) #22	SCAP (ENSRROG00000029774) #23	PTPN23 (ENSRROG00000036266) #24	KLHL18 (ENSRROG00000038946) #25	KIF9 (ENSRROG00000034098) #26	SETD2 (ENSRROG00000029515) #27	NBEAL2 (ENSRROG00000029997) #28	CCDC12 (ENSRROG00000039721) #29	PTH1R (ENSRROG00000037221) #30	MYL3 (ENSRROG00000019996) #31	ENSRROG00000042185	ENSRROG00000019464	ENSRROG00000037004	ENSRROG00000033992	PRSS50 (ENSRROG00000040761) #32	TMIE (ENSRROG00000043995) #34
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e.b	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Vervet Monkey	MODERN SPECIES	14	PFKFB4 (ENSCSAG00000015755)	SHISA5 (ENSCSAG00000015759)	ATRIP (ENSCSAG00000015808) #8	CCDC51 (ENSCSAG00000015828) #10	PLXNB1 (ENSCSAG00000015878) #11	FBXW12 (ENSCSAG00000015896) #12	SPINK8 (ENSCSAG00000015901) #13	NME6 (ENSCSAG00000015904) #14	ENSCSAG00000015906 #15	CAMP (ENSCSAG00000015913) #16	CDC25A (ENSCSAG00000015941) #17	MAP4 (ENSCSAG00000015959) #18	DHX30 (ENSCSAG00000015968) #19	SMARCC1 (ENSCSAG00000015979) #20	CSPG5 (ENSCSAG00000015996) #21	ELP6 (ENSCSAG00000016007) #22	SCAP (ENSCSAG00000016024) #23	PTPN23 (ENSCSAG00000016033) #24	KLHL18 (ENSCSAG00000016042) #25	KIF9 (ENSCSAG00000016103) #26	SETD2 (ENSCSAG00000016130) #27	NBEAL2 (ENSCSAG00000016142) #28	CCDC12 (ENSCSAG00000016154) #29	PTH1R (ENSCSAG00000016160) #30	MYL3 (ENSCSAG00000016166) #31	ENSCSAG00000016174	ENSCSAG00000016181	ENSCSAG00000016188	PRSS50 (ENSCSAG00000016195) #32	TMIE (ENSCSAG00000016200) #34	ALS2CL (ENSCSAG00000016211) #35
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e.b	ENSGT00940000164123 #18	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00910000147877	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Macaca	ANCESTRAL SPECIES	5	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00910000147877	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Rhesus	MODERN SPECIES	11	ATRIP (ENSMMUG00000010058) #8	TMA7 (ENSMMUG00000062695) #9	CCDC51 (ENSMMUG00000050584) #10	PLXNB1 (ENSMMUG00000003074) #11	FBXW12 (ENSMMUG00000003079) #12	SPINK8 (ENSMMUG00000049153) #13	NME6 (ENSMMUG00000003078) #14	ZNF589 (ENSMMUG00000021607) #15	CAMP (ENSMMUG00000010655) #16	CDC25A (ENSMMUG00000020954) #17	MAP4 (ENSMMUG00000003823) #18	ENSMMUG00000055794	DHX30 (ENSMMUG00000003820) #19	SMARCC1 (ENSMMUG00000009345) #20	CSPG5 (ENSMMUG00000031732) #21	ELP6 (ENSMMUG00000013385) #22	SCAP (ENSMMUG00000014046) #23	PTPN23 (ENSMMUG00000014045) #24	KLHL18 (ENSMMUG00000006454) #25	KIF9 (ENSMMUG00000045275) #26	ENSMMUG00000060693	SETD2 (ENSMMUG00000021117) #27	NBEAL2 (ENSMMUG00000019813) #28	CCDC12 (ENSMMUG00000019810) #29	PTH1R (ENSMMUG00000014742) #30	MYL3 (ENSMMUG00000014741) #31	ENSMMUG00000014739	ENSMMUG00000021254	ENSMMUG00000021253	ENSMMUG00000055946 #32	TMIE (ENSMMUG00000021249)
Crab-eating macaque	MODERN SPECIES	11	FBXW12 (ENSMFAG00000037485) #12	SPINK8 (ENSMFAG00000040367) #13	NME6 (ENSMFAG00000039246) #14	ENSMFAG00000062951	ZNF589 (ENSMFAG00000001588) #15	CAMP (ENSMFAG00000032837) #16	CDC25A (ENSMFAG00000044959) #17	ENSMFAG00000050351	ENSMFAG00000054714	ENSMFAG00000056283	MAP4 (ENSMFAG00000031095) #18	ENSMFAG00000055827	DHX30 (ENSMFAG00000033894) #19	SMARCC1 (ENSMFAG00000043050) #20	CSPG5 (ENSMFAG00000000124) #21	ELP6 (ENSMFAG00000042895) #22	SCAP (ENSMFAG00000031375) #23	ENSMFAG00000049731	ENSMFAG00000064753 #25	ENSMFAG00000064995	KLHL18 (ENSMFAG00000002292) #25	ENSMFAG00000050867	KIF9 (ENSMFAG00000043979) #26	SETD2 (ENSMFAG00000001601) #27	NBEAL2 (ENSMFAG00000000234) #28	CCDC12 (ENSMFAG00000002976) #29	PTH1R (ENSMFAG00000033228) #30	MYL3 (ENSMFAG00000033860) #31	ENSMFAG00000032744	ENSMFAG00000001287	PRSS50 (ENSMFAG00000042197) #32
Pig-tailed macaque	MODERN SPECIES	563	CCDC51 (ENSMNEG00000039774) #10	PLXNB1 (ENSMNEG00000040042) #11	FBXW12 (ENSMNEG00000039141) #12	SPINK8 (ENSMNEG00000030973) #13	NME6 (ENSMNEG00000000098) #14	ENSMNEG00000036934	ENSMNEG00000033536 #15	CAMP (ENSMNEG00000044973) #16	ENSMNEG00000043448	ENSMNEG00000001920	CDC25A (ENSMNEG00000037982) #17	MAP4 (ENSMNEG00000020005) #18	DHX30 (ENSMNEG00000035478) #19	SMARCC1 (ENSMNEG00000043669) #20	CSPG5 (ENSMNEG00000037197) #21	ELP6 (ENSMNEG00000029623) #22	SCAP (ENSMNEG00000032239) #23	PTPN23 (ENSMNEG00000009263) #24	KLHL18 (ENSMNEG00000033612) #25	KIF9 (ENSMNEG00000040195) #26	SETD2 (ENSMNEG00000019476) #27	NBEAL2 (ENSMNEG00000042018) #28	CCDC12 (ENSMNEG00000035785) #29	ENSMNEG00000038650	PTH1R (ENSMNEG00000028936) #30	MYL3 (ENSMNEG00000044269) #31	ENSMNEG00000031645	ENSMNEG00000032092	ENSMNEG00000027522	PRSS50 (ENSMNEG00000042941) #32	TMIE (ENSMNEG00000042868) #34
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e.b	ENSGT00940000164123 #18	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00910000147877	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Olive baboon	MODERN SPECIES	11	ATRIP (ENSPANG00000021869) #8	ENSPANG00000031150 #9	CCDC51 (ENSPANG00000032892) #10	PLXNB1 (ENSPANG00000017538) #11	FBXW12 (ENSPANG00000005491) #12	SPINK8 (ENSPANG00000015973) #13	NME6 (ENSPANG00000014292) #14	ZNF589 (ENSPANG00000034725) #15	CAMP (ENSPANG00000014733) #16	CDC25A (ENSPANG00000013403) #17	ENSPANG00000029694	MAP4 (ENSPANG00000005974) #18	ENSPANG00000033985	DHX30 (ENSPANG00000014291) #19	SMARCC1 (ENSPANG00000008561) #20	ELP6 (ENSPANG00000022729) #22	SCAP (ENSPANG00000006873) #23	PTPN23 (ENSPANG00000021916) #24	KLHL18 (ENSPANG00000019810) #25	SETD2 (ENSPANG00000009321) #27	NBEAL2 (ENSPANG00000016986) #28	ENSPANG00000041835	CCDC12 (ENSPANG00000017485) #29	ENSPANG00000013767 #30	MYL3 (ENSPANG00000021040) #31	ENSPANG00000008026	ENSPANG00000042911	ENSPANG00000012872	ENSPANG00000007057	PRSS50 (ENSPANG00000006043) #32	ENSPANG00000019493 #34
Cercopithecinae_d	ANCESTRAL SPECIES	44	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000166259	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000005052.e.b	ENSGT00940000164123 #18	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00910000147877	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Drill	MODERN SPECIES	806	PLXNB1 (ENSMLEG00000041769) #11	FBXW12 (ENSMLEG00000043342) #12	SPINK8 (ENSMLEG00000041095) #13	NME6 (ENSMLEG00000032866) #14	ZNF589 (ENSMLEG00000028173) #15	ENSMLEG00000032415	CAMP (ENSMLEG00000037421) #16	ENSMLEG00000034080	CDC25A (ENSMLEG00000041783) #17	ENSMLEG00000003302	MAP4 (ENSMLEG00000021775) #18	ENSMLEG00000004461	DHX30 (ENSMLEG00000023203) #19	SMARCC1 (ENSMLEG00000002974) #20	CSPG5 (ENSMLEG00000042730) #21	ELP6 (ENSMLEG00000042220) #22	SCAP (ENSMLEG00000042717) #23	PTPN23 (ENSMLEG00000029015) #24	KLHL18 (ENSMLEG00000033926) #25	KIF9 (ENSMLEG00000030077) #26	SETD2 (ENSMLEG00000035263) #27	NBEAL2 (ENSMLEG00000041035) #28	CCDC12 (ENSMLEG00000038060) #29	PTH1R (ENSMLEG00000032356) #30	ENSMLEG00000029517	MYL3 (ENSMLEG00000007983) #31	ENSMLEG00000043486	ENSMLEG00000033119	ENSMLEG00000027865	PRSS50 (ENSMLEG00000035053) #32	TMIE (ENSMLEG00000041519) #34
Sooty mangabey	MODERN SPECIES	415	PLXNB1 (ENSCATG00000044029) #11	FBXW12 (ENSCATG00000039647) #12	SPINK8 (ENSCATG00000013332) #13	NME6 (ENSCATG00000013771) #14	ENSCATG00000029886	ZNF589 (ENSCATG00000035420) #15	CAMP (ENSCATG00000024897) #16	ENSCATG00000043341	ENSCATG00000015380	CDC25A (ENSCATG00000032942) #17	ENSCATG00000041037	MAP4 (ENSCATG00000032929) #18	DHX30 (ENSCATG00000043684) #19	SMARCC1 (ENSCATG00000036207) #20	CSPG5 (ENSCATG00000006491) #21	ELP6 (ENSCATG00000041567) #22	SCAP (ENSCATG00000043713) #23	PTPN23 (ENSCATG00000036276) #24	KLHL18 (ENSCATG00000006242) #25	KIF9 (ENSCATG00000042158) #26	SETD2 (ENSCATG00000043683) #27	NBEAL2 (ENSCATG00000030307) #28	CCDC12 (ENSCATG00000033681) #29	ENSCATG00000029080	PTH1R (ENSCATG00000043326) #30	MYL3 (ENSCATG00000029522) #31	ENSCATG00000037103	ENSCATG00000032416	ENSCATG00000029296	PRSS50 (ENSCATG00000039179) #32	TMIE (ENSCATG00000040756) #34
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347.v.a #20	ENSGT00440000034270 #21	ENSGT00940000155554.k.b	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Cebidae	ANCESTRAL SPECIES	14	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347.w #20	ENSGT00440000034270 #21	ENSGT00940000155554.k.b	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Marmoset	MODERN SPECIES	6	SHISA5 (ENSCJAG00000002915)	ATRIP (ENSCJAG00000002874) #8	TMA7 (ENSCJAG00000070908) ##9	CCDC51 (ENSCJAG00000070203) #10	PLXNB1 (ENSCJAG00000002762) #11	FBXW12 (ENSCJAG00000002742) #12	SPINK8 (ENSCJAG00000002737) #13	NME6 (ENSCJAG00000002722) #14	CAMP (ENSCJAG00000082484) #16	CDC25A (ENSCJAG00000002673) #17	MAP4 (ENSCJAG00000002483) #18	DHX30 (ENSCJAG00000002635) #19	ENSCJAG00000071780	SMARCC1 (ENSCJAG00000002511) #20	CSPG5 (ENSCJAG00000002499) #21	ELP6 (ENSCJAG00000002465) #22	SCAP (ENSCJAG00000002419) #23	PTPN23 (ENSCJAG00000002397) #24	KLHL18 (ENSCJAG00000002386) #25	ENSCJAG00000031398	KIF9 (ENSCJAG00000002342) #26	SETD2 (ENSCJAG00000002303) #27	NBEAL2 (ENSCJAG00000002284) #28	ENSCJAG00000002280 #29	PTH1R (ENSCJAG00000002254) #30	MYL3 (ENSCJAG00000043990) #31	ENSCJAG00000002232	PRSS50 (ENSCJAG00000002220) #32	TMIE (ENSCJAG00000002217) #34	ALS2CL (ENSCJAG00000002182) #35	FAM240A (ENSCJAG00000075167) #36
Cebidae_a	ANCESTRAL SPECIES	24	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347.w #20	ENSGT00440000034270 #21	ENSGT00940000155554.k.b	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Capuchin	MODERN SPECIES		SPINK8 (ENSCCAG00000035889) #13	NME6 (ENSCCAG00000029679) #14	ENSCCAG00000027197 #15	CAMP (ENSCCAG00000034299) #16	CDC25A (ENSCCAG00000036181) #17	ENSCCAG00000019663	MAP4 (ENSCCAG00000026077) #18	ENSCCAG00000036384	DHX30 (ENSCCAG00000032718) #19	ENSCCAG00000024986	ENSCCAG00000001410	SMARCC1 (ENSCCAG00000027634) #20	LSM5 (ENSCCAG00000000821)	CSPG5 (ENSCCAG00000030546) #21	ENSCCAG00000024536	ELP6 (ENSCCAG00000025274) #22	SCAP (ENSCCAG00000037565) #23	PTPN23 (ENSCCAG00000035319) #24	KLHL18 (ENSCCAG00000033413) #25	KIF9 (ENSCCAG00000025147) #26	SETD2 (ENSCCAG00000028878) #27	NBEAL2 (ENSCCAG00000016929) #28	CCDC12 (ENSCCAG00000020126) #29	PTH1R (ENSCCAG00000025784) #30	MYL3 (ENSCCAG00000033547) #31	ENSCCAG00000023853	PRSS45P (ENSCCAG00000027202)	ENSCCAG00000036367	PRSS50 (ENSCCAG00000018793) #32	TMIE (ENSCCAG00000032269) #34	ALS2CL (ENSCCAG00000025309) #35
Bolivian squirrel monkey	MODERN SPECIES	59	TMA7 (ENSSBOG00000025835) #9	CCDC51 (ENSSBOG00000034836) #10	PLXNB1 (ENSSBOG00000020914) #11	FBXW12 (ENSSBOG00000023701) #12	SPINK8 (ENSSBOG00000027866) #13	NME6 (ENSSBOG00000021349) #14	ENSSBOG00000028662 #15	CAMP (ENSSBOG00000034385) #16	CDC25A (ENSSBOG00000025104) #17	MAP4 (ENSSBOG00000033564) #18	DHX30 (ENSSBOG00000035810) #19	ENSSBOG00000020538	SMARCC1 (ENSSBOG00000034716) #20	CSPG5 (ENSSBOG00000030429) #21	ENSSBOG00000034659	ELP6 (ENSSBOG00000009153) #22	SCAP (ENSSBOG00000027955) #23	PTPN23 (ENSSBOG00000003424) #24	KLHL18 (ENSSBOG00000027931) #25	KIF9 (ENSSBOG00000035834) #26	ENSSBOG00000009349	SETD2 (ENSSBOG00000018044) #27	NBEAL2 (ENSSBOG00000032401) #28	CCDC12 (ENSSBOG00000035443) #29	PTH1R (ENSSBOG00000025002) #30	MYL3 (ENSSBOG00000030319) #31	ENSSBOG00000028992	ENSSBOG00000024974	ENSSBOG00000028894	PRSS50 (ENSSBOG00000031754) #32	TMIE (ENSSBOG00000027096) #34
Mas night monkey	MODERN SPECIES	1223						SPINK8 (ENSANAG00000025106) #13	NME6 (ENSANAG00000020489) #14	ENSANAG00000023402 #15	CAMP (ENSANAG00000032172) #16	CDC25A (ENSANAG00000029789) #17	MAP4 (ENSANAG00000025563) #18	DHX30 (ENSANAG00000024810) #19	SMARCC1 (ENSANAG00000030064) #20	CSPG5 (ENSANAG00000028843) #21	ENSANAG00000006197	ELP6 (ENSANAG00000030860) #22	ENSANAG00000027272	ENSANAG00000036093	ENSANAG00000029946 #24	LRRC2 (ENSANAG00000023953)	ENSANAG00000029116 #26	ENSANAG00000024714
Tarsier	MODERN SPECIES	6777											ENSTSYG00000032123	ENSTSYG00000030909	DHX30 (ENSTSYG00000005093) #19	SMARCC1 (ENSTSYG00000012258) #20	CSPG5 (ENSTSYG00000000241) #21	ELP6 (ENSTSYG00000037294) #22	ENSTSYG00000037243	ENSTSYG00000034164	PTPN23 (ENSTSYG00000029646) #24
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Lemuriformes	ANCESTRAL SPECIES	17	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Mouse lemur	MODERN SPECIES	5	TMA7 (ENSMICG00000037856) ##9	CCDC51 (ENSMICG00000013899) #10	PLXNB1 (ENSMICG00000013880) #11	FBXW12 (ENSMICG00000041904) #12	SPINK8 (ENSMICG00000031612) #13	NME6 (ENSMICG00000006161) #14	CAMP (ENSMICG00000000736) #16	CDC25A (ENSMICG00000000733) #17	ENSMICG00000036510	ENSMICG00000008814	DHX30 (ENSMICG00000008784) #19	ENSMICG00000045835	ENSMICG00000026360	SMARCC1 (ENSMICG00000013719) #20	CSPG5 (ENSMICG00000013714) #21	ELP6 (ENSMICG00000013709) #22	SCAP (ENSMICG00000013666) #23	PTPN23 (ENSMICG00000013640) #24	ENSMICG00000045904	KLHL18 (ENSMICG00000017657) #25	KIF9 (ENSMICG00000017656) #26	ENSMICG00000042677	SETD2 (ENSMICG00000038231) #27	NBEAL2 (ENSMICG00000017654) #28	CCDC12 (ENSMICG00000032886) #29	PTH1R (ENSMICG00000017652) #30	MYL3 (ENSMICG00000017651) #31	ENSMICG00000029208	ENSMICG00000016545	ENSMICG00000044328	TMIE (ENSMICG00000028660) #34
Lemuriformes_a	ANCESTRAL SPECIES	6	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Coquerels sifaka	MODERN SPECIES	50	PFKFB4 (ENSPCOG00000015729)	SHISA5 (ENSPCOG00000021377)	ATRIP (ENSPCOG00000026930) #8	TMA7 (ENSPCOG00000025161) #9	CCDC51 (ENSPCOG00000021612) #10	PLXNB1 (ENSPCOG00000016913) #11	FBXW12 (ENSPCOG00000027626) #12	NME6 (ENSPCOG00000016972) #14	ENSPCOG00000027517 #15	CAMP (ENSPCOG00000027933) #16	CDC25A (ENSPCOG00000014303) #17	ENSPCOG00000015417	DHX30 (ENSPCOG00000025552) #19	SMARCC1 (ENSPCOG00000017575) #20	CSPG5 (ENSPCOG00000018951) #21	ELP6 (ENSPCOG00000028540) #22	SCAP (ENSPCOG00000027450) #23	PTPN23 (ENSPCOG00000028481) #24	KLHL18 (ENSPCOG00000022873) #25	KIF9 (ENSPCOG00000028341) #26	SETD2 (ENSPCOG00000004126) #27	NBEAL2 (ENSPCOG00000024080) #28	CCDC12 (ENSPCOG00000018682) #29	PTH1R (ENSPCOG00000026264) #30	MYL3 (ENSPCOG00000017058) #31	ENSPCOG00000024969	ENSPCOG00000021662	ENSPCOG00000027904	TMIE (ENSPCOG00000020833) #34	ALS2CL (ENSPCOG00000000733) #35	FAM240A (ENSPCOG00000019886) #36
Greater bamboo lemur	MODERN SPECIES	377										CAMP (ENSPSMG00000012757) #16	CDC25A (ENSPSMG00000012648) #17	ENSPSMG00000012533	DHX30 (ENSPSMG00000012460) #19	SMARCC1 (ENSPSMG00000012344) #20	CSPG5 (ENSPSMG00000012293) #21	ELP6 (ENSPSMG00000012270) #22	SCAP (ENSPSMG00000012251) #23	PTPN23 (ENSPSMG00000012138) #24	KLHL18 (ENSPSMG00000012110) #25	ENSPSMG00000012094 #26
Bushbaby	MODERN SPECIES	197														ENSOGAG00000012431 #20	CSPG5 (ENSOGAG00000012430) #21	ELP6 (ENSOGAG00000002283) #22	PTPN23 (ENSOGAG00000033212) #24	KLHL18 (ENSOGAG00000008804) #25	KIF9 (ENSOGAG00000008798) #26	SETD2 (ENSOGAG00000016827) #27	NBEAL2 (ENSOGAG00000016808) #28	CCDC12 (ENSOGAG00000016807) #29	PTH1R (ENSOGAG00000016796) #30	MYL3 (ENSOGAG00000016791) #31	ENSOGAG00000016789	ENSOGAG00000032094	ENSOGAG00000030813	PRSS50 (ENSOGAG00000016887) #32	TMIE (ENSOGAG00000002043) #34	ALS2CL (ENSOGAG00000016883) #35	ENSOGAG00000027335
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Tree shrew	MODERN SPECIES	3148																ELP6 (ENSTBEG00000008468) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Lagomorpha	ANCESTRAL SPECIES	11	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Rabbit	MODERN SPECIES	20	SHISA5 (ENSOCUG00000022049)	TREX1 (ENSOCUG00000024763) #7	ATRIP (ENSOCUG00000005207) #8	ENSOCUG00000029966 #9	CCDC51 (ENSOCUG00000001931) #10	PLXNB1 (ENSOCUG00000001912) #11	FBXW12 (ENSOCUG00000007706) #12	NME6 (ENSOCUG00000000554) #14	CAMP (ENSOCUG00000015518) #16	ENSOCUG00000012350 #16	CDC25A (ENSOCUG00000012342) #17	MAP4 (ENSOCUG00000003956) #18	DHX30 (ENSOCUG00000006515) #19	ENSOCUG00000011393	SMARCC1 (ENSOCUG00000014013) #20	ELP6 (ENSOCUG00000000214) #22	SCAP (ENSOCUG00000003152) #23	PTPN23 (ENSOCUG00000003139) #24	ENSOCUG00000025236	KLHL18 (ENSOCUG00000030813) #25	ENSOCUG00000002839 #27	ENSOCUG00000025559	NBEAL2 (ENSOCUG00000012438) #28	CCDC12 (ENSOCUG00000012431) #29	PTH1R (ENSOCUG00000012400) #30	ENSOCUG00000012392 #31	ENSOCUG00000013000	ENSOCUG00000026624	ENSOCUG00000025146	ENSOCUG00000029402	ENSOCUG00000039123
Pika	MODERN SPECIES	2619						SHISA5 (ENSOPRG00000017227)	ATRIP (ENSOPRG00000017224) #8	CCDC51 (ENSOPRG00000017222) #10	PLXNB1 (ENSOPRG00000017214) #11	ENSOPRG00000017212 #12	CDC25A (ENSOPRG00000017207) #17	ENSOPRG00000017201	DHX30 (ENSOPRG00000017190) #19	SMARCC1 (ENSOPRG00000017180) #20	CSPG5 (ENSOPRG00000017173) #21	ELP6 (ENSOPRG00000017170) #22
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Kangaroo rat	MODERN SPECIES	426					ENSDORG00000029003	Ccdc51 (ENSDORG00000016460) #10	Plxnb1 (ENSDORG00000002977) #11	Nme6 (ENSDORG00000027275) #14	Camp (ENSDORG00000010620) #16	Cdc25a (ENSDORG00000011077) #17	ENSDORG00000029905	ENSDORG00000011216	Dhx30 (ENSDORG00000028764) #19	Smarcc1 (ENSDORG00000000578) #20	Cspg5 (ENSDORG00000025000) #21	Elp6 (ENSDORG00000010691) #22	Scap (ENSDORG00000003476) #23	ENSDORG00000028535	ENSDORG00000008942	Uqcrc1 (ENSDORG00000008949)	Tmem89 (ENSDORG00000008951)	Celsr3 (ENSDORG00000008952)	ENSDORG00000026062	Nckipsd (ENSDORG00000008960)	Ip6k2 (ENSDORG00000008962)	Prkar2a (ENSDORG00000004663)	Slc25a20 (ENSDORG00000010459)	ENSDORG00000026187	P4htm (ENSDORG00000000362)	Wdr6 (ENSDORG00000028656)	Dalrd3 (ENSDORG00000000367)
Myomorpha	ANCESTRAL SPECIES	26	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Muroidea	ANCESTRAL SPECIES	27	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Northern American deer mouse	MODERN SPECIES	20	Shisa5 (ENSPEMG00000023392)	Trex1 (ENSPEMG00000012006) #7	Atrip (ENSPEMG00000015592) #8	Tma7 (ENSPEMG00000022569) #9	Ccdc51 (ENSPEMG00000021908) #10	Plxnb1 (ENSPEMG00000014438) #11	ENSPEMG00000019218 #12	ENSPEMG00000008236	Nme6 (ENSPEMG00000019226) #14	Camp (ENSPEMG00000016929) #16	Cdc25a (ENSPEMG00000009672) #17	ENSPEMG00000008355	Dhx30 (ENSPEMG00000014177) #19	Smarcc1 (ENSPEMG00000018205) #20	Cspg5 (ENSPEMG00000018898) #21	Elp6 (ENSPEMG00000012717) #22	Scap (ENSPEMG00000010625) #23	ENSPEMG00000028354 #24	Klhl18 (ENSPEMG00000010798) #25	Ngp (ENSPEMG00000008056)	Kif9 (ENSPEMG00000001800) #26	Setd2 (ENSPEMG00000018817) #27	Nradd (ENSPEMG00000013742)	Nbeal2 (ENSPEMG00000021191) #28	ENSPEMG00000022196 #29	Pth1r (ENSPEMG00000021463) #30	Myl3 (ENSPEMG00000020661) #31	Prss42 (ENSPEMG00000016065)	ENSPEMG00000029953	Prss44 (ENSPEMG00000000134)	Prss43 (ENSPEMG00000020355)
Prairie vole	MODERN SPECIES	13	Shisa5 (ENSMOCG00000016068)	Trex1 (ENSMOCG00000011329) #7	Atrip (ENSMOCG00000004088) #8	Ccdc51 (ENSMOCG00000015041) #10	ENSMOCG00000016314 ##9	Plxnb1 (ENSMOCG00000010199) #11	Spink8 (ENSMOCG00000004226) #13	ENSMOCG00000022021	Camp (ENSMOCG00000017347) #16	Cdc25a (ENSMOCG00000001981) #17	ENSMOCG00000021038	ENSMOCG00000015298	Dhx30 (ENSMOCG00000009984) #19	Smarcc1 (ENSMOCG00000000702) #20	Cspg5 (ENSMOCG00000020952) #21	Elp6 (ENSMOCG00000005025) #22	Scap (ENSMOCG00000021844) #23	Ptpn23 (ENSMOCG00000011270) #24	Klhl18 (ENSMOCG00000015127) #25	Kif9 (ENSMOCG00000015001) #26	Setd2 (ENSMOCG00000007000) #27	Nradd (ENSMOCG00000018123)	Nbeal2 (ENSMOCG00000014179) #28	Ccdc12 (ENSMOCG00000004483) #29	Pth1r (ENSMOCG00000018080) #30	Myl3 (ENSMOCG00000016100) #31	Prss42 (ENSMOCG00000017620)	Prss44 (ENSMOCG00000007959)	Prss43 (ENSMOCG00000020457)	Prss45 (ENSMOCG00000003489)	Prss46 (ENSMOCG00000015536)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Chinese hamster chok1gshd	MODERN SPECIES	284	Shisa5 (ENSCGRG00001014903)	Trex1 (ENSCGRG00001009455) #7	Atrip (ENSCGRG00001010959) #8	ENSCGRG00001023918 #9	Ccdc51 (ENSCGRG00001019816) #10	Plxnb1 (ENSCGRG00001003902) #11	ENSCGRG00001001316 #12	Spink8 (ENSCGRG00001017383) #13	Nme6 (ENSCGRG00001001441) #14	ENSCGRG00001022311 #16	Cdc25a (ENSCGRG00001019109) #17	ENSCGRG00001011513	Dhx30 (ENSCGRG00001014229) #19	Smarcc1 (ENSCGRG00001003221) #20	Cspg5 (ENSCGRG00001008815) #21	Elp6 (ENSCGRG00001000041) #22	Scap (ENSCGRG00001024973) #23	Ptpn23 (ENSCGRG00001016077) #24	ENSCGRG00001015649	ENSCGRG00001013112	Klhl18 (ENSCGRG00001020613) #25	Kif9 (ENSCGRG00001024280) #26	Setd2 (ENSCGRG00001005038) #27	Nradd (ENSCGRG00001000554)	Nbeal2 (ENSCGRG00001019565) #28	Ccdc12 (ENSCGRG00001000459) #29	Pth1r (ENSCGRG00001000950) #30	Myl3 (ENSCGRG00001020252) #31	Prss42 (ENSCGRG00001011957)	Prss44 (ENSCGRG00001021614)	Prss43 (ENSCGRG00001011161)
Golden Hamster	MODERN SPECIES	667	ENSMAUG00000016638	Trex1 (ENSMAUG00000014095) #7	Atrip (ENSMAUG00000019223) #8	ENSMAUG00000019600 #9	Ccdc51 (ENSMAUG00000021867) #10	Plxnb1 (ENSMAUG00000012722) #11	ENSMAUG00000017547 #12	Spink8 (ENSMAUG00000021916) #13	Nme6 (ENSMAUG00000022038) #14	Camp (ENSMAUG00000014897) #16	ENSMAUG00000016195	ENSMAUG00000019332	Dhx30 (ENSMAUG00000021404) #19	Smarcc1 (ENSMAUG00000006447) #20	Cspg5 (ENSMAUG00000011389) #21	Elp6 (ENSMAUG00000019285) #22	Scap (ENSMAUG00000020598) #23	Ptpn23 (ENSMAUG00000020912) #24	Klhl18 (ENSMAUG00000021899) #25	Kif9 (ENSMAUG00000007442) #26	Setd2 (ENSMAUG00000013516) #27	Nradd (ENSMAUG00000021777)	Nbeal2 (ENSMAUG00000009894) #28	Ccdc12 (ENSMAUG00000008879) #29	Pth1r (ENSMAUG00000022025) #30	Myl3 (ENSMAUG00000021665) #31	Prss42 (ENSMAUG00000021957)	Prss43 (ENSMAUG00000014892)	ENSMAUG00000002282	Prss46 (ENSMAUG00000005896)	Prss50 (ENSMAUG00000011726) #32
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Mus	ANCESTRAL SPECIES	4	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557.d #12	ENSGT00940000162557.c.a.b.a.a.a #12	ENSGT00940000162557.c.b.a.b #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Mus_C	ANCESTRAL SPECIES	23	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557.d #12	ENSGT00940000162557.c.a.b.a.a.a #12	ENSGT00940000162557.c.b.a.b #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Steppe mouse	MODERN SPECIES	3120											ENSMSIG00000023727	Dhx30 (ENSMSIG00000023948) #19	ENSMSIG00000024151	Smarcc1 (ENSMSIG00000024171) #20	ENSMSIG00000024433 #21	Elp6 (ENSMSIG00000024451) #22	Scap (ENSMSIG00000024487) #23	ENSMSIG00000024559	Ptpn23 (ENSMSIG00000024566) #24	Ngp (ENSMSIG00000024635)	Klhl18 (ENSMSIG00000024648) #25	Setd2 (ENSMSIG00000024689) #27	Nradd (ENSMSIG00000024844)	Nbeal2 (ENSMSIG00000024861) #28	Ccdc12 (ENSMSIG00000025198) #29	Pth1r (ENSMSIG00000025217) #30	ENSMSIG00000025359 #31	ENSMSIG00000025375	Prss42 (ENSMSIG00000025380)	Prss44 (ENSMSIG00000025389)	ENSMSIG00000025411
spretus	MODERN SPECIES	18	MGP_SPRETEiJ_G0033859 #7	MGP_SPRETEiJ_G0033858 #7	Atrip (MGP_SPRETEiJ_G0033860) #8	Tma7 (MGP_SPRETEiJ_G0033861) #9	Ccdc51 (MGP_SPRETEiJ_G0033862) #10	MGP_SPRETEiJ_G0033863	MGP_SPRETEiJ_G0033864 #12	Spink8 (MGP_SPRETEiJ_G0033868) #13	Nme6 (MGP_SPRETEiJ_G0033869) #14	MGP_SPRETEiJ_G0033870 #16	Cdc25a (MGP_SPRETEiJ_G0033871) #17	Map4 (MGP_SPRETEiJ_G0033872) #18	Dhx30 (MGP_SPRETEiJ_G0033873) #19	Smarcc1 (MGP_SPRETEiJ_G0033874) #20	Cspg5 (MGP_SPRETEiJ_G0033875) #21	Elp6 (MGP_SPRETEiJ_G0033876) #22	Scap (MGP_SPRETEiJ_G0033877) #23	Ptpn23 (MGP_SPRETEiJ_G0033878) #24	Ngp (MGP_SPRETEiJ_G0033879)	Klhl18 (MGP_SPRETEiJ_G0033880) #25	Kif9 (MGP_SPRETEiJ_G0033881) #26	Setd2 (MGP_SPRETEiJ_G0033882) #27	Nradd (MGP_SPRETEiJ_G0033883)	Nbeal2 (MGP_SPRETEiJ_G0033884) #28	Ccdc12 (MGP_SPRETEiJ_G0033885) #29	Pth1r (MGP_SPRETEiJ_G0033886) #30	Myl3 (MGP_SPRETEiJ_G0033887) #31	Prss42 (MGP_SPRETEiJ_G0033888)	Prss44 (MGP_SPRETEiJ_G0033889)	Prss43 (MGP_SPRETEiJ_G0033890)	Prss45 (MGP_SPRETEiJ_G0033891)
Mouse	MODERN SPECIES	18	Fbxw19 (ENSMUSG00000074061) #12	Fbxw15 (ENSMUSG00000074060) #12	Fbxw24 (ENSMUSG00000062275) #12	Fbxw25 (ENSMUSG00000094992) #12	Fbxw18 (ENSMUSG00000074059) #12	Fbxw26 (ENSMUSG00000059547) #12	Fbxw27 (ENSMUSG00000104614) #12	Spink8 (ENSMUSG00000050074) #13	Nme6 (ENSMUSG00000032478) #14	Camp (ENSMUSG00000038357) #16	Cdc25a (ENSMUSG00000032477) #17	Map4 (ENSMUSG00000032479) #18	Dhx30 (ENSMUSG00000032480) #19	Smarcc1 (ENSMUSG00000032481) #20	Cspg5 (ENSMUSG00000032482) #21	Elp6 (ENSMUSG00000054836) #22	Scap (ENSMUSG00000032485) #23	Ptpn23 (ENSMUSG00000036057) #24	Ngp (ENSMUSG00000032484)	Klhl18 (ENSMUSG00000054792) #25	Kif9 (ENSMUSG00000032489) #26	Setd2 (ENSMUSG00000044791) #27	Nradd (ENSMUSG00000032491)	Nbeal2 (ENSMUSG00000056724) #28	Ccdc12 (ENSMUSG00000019659) #29	Pth1r (ENSMUSG00000032492) #30	Myl3 (ENSMUSG00000059741) #31	Prss42 (ENSMUSG00000044664)	Prss44 (ENSMUSG00000032493)	Prss43 (ENSMUSG00000058398)	Prss45 (ENSMUSG00000047257)
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0032714 #7	MGP_CAROLIEiJ_G0032713 #7	Atrip (MGP_CAROLIEiJ_G0032715) #8	Tma7 (MGP_CAROLIEiJ_G0032716) #9	Ccdc51 (MGP_CAROLIEiJ_G0032717) #10	Plxnb1 (MGP_CAROLIEiJ_G0032718) #11	MGP_CAROLIEiJ_G0032719 #12	Spink8 (MGP_CAROLIEiJ_G0032720) #13	Nme6 (MGP_CAROLIEiJ_G0032721) #14	Camp (MGP_CAROLIEiJ_G0032722) #16	Cdc25a (MGP_CAROLIEiJ_G0032723) #17	Map4 (MGP_CAROLIEiJ_G0032724) #18	Dhx30 (MGP_CAROLIEiJ_G0032725) #19	Smarcc1 (MGP_CAROLIEiJ_G0032726) #20	Cspg5 (MGP_CAROLIEiJ_G0032727) #21	Elp6 (MGP_CAROLIEiJ_G0032728) #22	Scap (MGP_CAROLIEiJ_G0032729) #23	Ptpn23 (MGP_CAROLIEiJ_G0032730) #24	Ngp (MGP_CAROLIEiJ_G0032731)	Klhl18 (MGP_CAROLIEiJ_G0032732) #25	Kif9 (MGP_CAROLIEiJ_G0032733) #26	Setd2 (MGP_CAROLIEiJ_G0032734) #27	Nradd (MGP_CAROLIEiJ_G0032735)	Nbeal2 (MGP_CAROLIEiJ_G0032736) #28	MGP_CAROLIEiJ_G0032737 #29	Pth1r (MGP_CAROLIEiJ_G0032738) #30	Myl3 (MGP_CAROLIEiJ_G0032739) #31	Prss42 (MGP_CAROLIEiJ_G0032740)	Prss44 (MGP_CAROLIEiJ_G0032741)	Prss43 (MGP_CAROLIEiJ_G0032742)	Prss45 (MGP_CAROLIEiJ_G0032743)
Shrew mouse	MODERN SPECIES	1	Shisa5 (MGP_PahariEiJ_G0015580)	MGP_PahariEiJ_G0015582 #7	MGP_PahariEiJ_G0015581 #7	Atrip (MGP_PahariEiJ_G0015583) #8	Tma7 (MGP_PahariEiJ_G0015584) ##9	Ccdc51 (MGP_PahariEiJ_G0015585) #10	Plxnb1 (MGP_PahariEiJ_G0015586) #11	MGP_PahariEiJ_G0015587 #13	Nme6 (MGP_PahariEiJ_G0015588) #14	Camp (MGP_PahariEiJ_G0015589) #16	Cdc25a (MGP_PahariEiJ_G0015590) #17	MGP_PahariEiJ_G0015591	Dhx30 (MGP_PahariEiJ_G0015592) #19	Smarcc1 (MGP_PahariEiJ_G0015593) #20	Cspg5 (MGP_PahariEiJ_G0015594) #21	Elp6 (MGP_PahariEiJ_G0015595) #22	Scap (MGP_PahariEiJ_G0015596) #23	Ptpn23 (MGP_PahariEiJ_G0015597) #24	Ngp (MGP_PahariEiJ_G0015598)	Klhl18 (MGP_PahariEiJ_G0015599) #25	Kif9 (MGP_PahariEiJ_G0015600) #26	Setd2 (MGP_PahariEiJ_G0015601) #27	Nradd (MGP_PahariEiJ_G0015602)	Nbeal2 (MGP_PahariEiJ_G0015603) #28	Ccdc12 (MGP_PahariEiJ_G0015604) #29	Pth1r (MGP_PahariEiJ_G0015605) #30	MGP_PahariEiJ_G0015606 #31	Prss42 (MGP_PahariEiJ_G0015607)	Prss44 (MGP_PahariEiJ_G0015608)	Prss43 (MGP_PahariEiJ_G0015609)	Prss45 (MGP_PahariEiJ_G0015610)
Rat	MODERN SPECIES	18	Atrip (ENSRNOG00000020670) #8	Ccdc51 (ENSRNOG00000020688) #10	Tma7 (ENSRNOG00000047225) ##9	Plxnb1 (ENSRNOG00000029510) #11	Fbxw12 (ENSRNOG00000020720) #12	Spink8 (ENSRNOG00000037199) #13	Nme6 (ENSRNOG00000020721) #14	Camp (ENSRNOG00000020733) #16	Cdc25a (ENSRNOG00000020737) #17	Map4 (ENSRNOG00000020748)	Dhx30 (ENSRNOG00000029194) #19	Smarcc1 (ENSRNOG00000020804) #20	Cspg5 (ENSRNOG00000020833) #21	AABR07071482.2 (ENSRNOG00000034052)	AABR07071482.1 (ENSRNOG00000031483)	Elp6 (ENSRNOG00000020847) #22	Scap (ENSRNOG00000020853) #23	Ptpn23 (ENSRNOG00000020862) #24	Ngp (ENSRNOG00000024330)	Klhl18 (ENSRNOG00000020880) #25	Kif9 (ENSRNOG00000020891) #26	Setd2 (ENSRNOG00000020915) #27	Nbeal2 (ENSRNOG00000027880) #28	Nradd (ENSRNOG00000020936)	Ccdc12 (ENSRNOG00000020946) #29	Pth1r (ENSRNOG00000020948) #30	Myl3 (ENSRNOG00000020955) #31	Prss42 (ENSRNOG00000031971)	Prss44 (ENSRNOG00000030073)	LOC100360828 (ENSRNOG00000023086)	Prss45 (ENSRNOG00000029649)
Upper Galilee mountains blind mole rat	MODERN SPECIES	404											ENSNGAG00000024115	Dhx30 (ENSNGAG00000023148) #19	ENSNGAG00000017964	Smarcc1 (ENSNGAG00000023236) #20	Cspg5 (ENSNGAG00000014646) #21	Elp6 (ENSNGAG00000011011) #22	ENSNGAG00000021120 #23	ENSNGAG00000013894 #23	Ptpn23 (ENSNGAG00000022237) #24	Ngp (ENSNGAG00000020343)	Klhl18 (ENSNGAG00000018274) #25	Kif9 (ENSNGAG00000018932) #26	Setd2 (ENSNGAG00000015267) #27	Nradd (ENSNGAG00000006969)	Nbeal2 (ENSNGAG00000020370) #28	Ccdc12 (ENSNGAG00000004149) #29	Pth1r (ENSNGAG00000024079) #30	Myl3 (ENSNGAG00000023872) #31	Prss42 (ENSNGAG00000023243)	Prss44 (ENSNGAG00000006844)	Prss45 (ENSNGAG00000023910)
Lesser Egyptian jerboa	MODERN SPECIES	88	ENSJJAG00000019292	ENSJJAG00000018076	ENSJJAG00000019810 ##9	Ccdc51 (ENSJJAG00000020589) #10	Plxnb1 (ENSJJAG00000002381) #11	Nme6 (ENSJJAG00000014892) #14	Camp (ENSJJAG00000020763) #16	Cdc25a (ENSJJAG00000005624) #17	ENSJJAG00000013858	ENSJJAG00000010648	ENSJJAG00000023311	ENSJJAG00000009892	ENSJJAG00000022882 #20	Cspg5 (ENSJJAG00000011976) #21	ENSJJAG00000018014	ENSJJAG00000011308 #22	ENSJJAG00000012176 #23	Ptpn23 (ENSJJAG00000023111) #24	Ngp (ENSJJAG00000019896)	Klhl18 (ENSJJAG00000022221) #25	Kif9 (ENSJJAG00000004798) #26	ENSJJAG00000014043	Setd2 (ENSJJAG00000022758) #27	ENSJJAG00000000233	Nradd (ENSJJAG00000008456)	Nbeal2 (ENSJJAG00000018112) #28	Ccdc12 (ENSJJAG00000014918) #29	Pth1r (ENSJJAG00000020640) #30	Myl3 (ENSJJAG00000021882) #31	ENSJJAG00000012384	ENSJJAG00000014988
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154345.b	ENSGT00940000164826	ENSGT00940000161734	ENSGT00940000159676	ENSGT00950000182899.C.a	ENSGT00940000158398	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000154345.b	ENSGT00940000164826	ENSGT00940000161734	ENSGT00940000159676	ENSGT00950000182899.C.a	ENSGT00940000158398	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000164826	ENSGT00940000161734	ENSGT00940000159676	ENSGT00950000182899.C.a	ENSGT00940000158398	ENSGT00940000160284 #14	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Long-tailed chinchilla	MODERN SPECIES	127	YEATS2 (ENSCLAG00000016934)	KLHL24 (ENSCLAG00000014813)	ENSCLAG00000015113	ENSCLAG00000015008	MCF2L2 (ENSCLAG00000015254)	B3GNT5 (ENSCLAG00000017892)	ENSCLAG00000015954	OSBPL11 (ENSCLAG00000015182)	NME6 (ENSCLAG00000014082) #14	CDC25A (ENSCLAG00000014577) #17	ENSCLAG00000014892	ENSCLAG00000013598	DHX30 (ENSCLAG00000014660) #19	SMARCC1 (ENSCLAG00000015868) #20	CSPG5 (ENSCLAG00000015103) #21	ELP6 (ENSCLAG00000014460) #22	SCAP (ENSCLAG00000015521) #23	PTPN23 (ENSCLAG00000016371) #24	ENSCLAG00000016267	KLHL18 (ENSCLAG00000016500) #25	KIF9 (ENSCLAG00000014675) #26	ENSCLAG00000014351	SETD2 (ENSCLAG00000014681) #27	ENSCLAG00000014776	NBEAL2 (ENSCLAG00000016378) #28	CCDC12 (ENSCLAG00000016013) #29	PTH1R (ENSCLAG00000014091) #30	MYL3 (ENSCLAG00000016046) #31	ENSCLAG00000015144	ENSCLAG00000015211	ENSCLAG00000015480 #32
Degu	MODERN SPECIES	167	ENSODEG00000014006	PARL (ENSODEG00000013822)	MAP6D1 (ENSODEG00000013420)	YEATS2 (ENSODEG00000015298)	KLHL24 (ENSODEG00000015151)	ENSODEG00000012517	B3GNT5 (ENSODEG00000020343)	OSBPL11 (ENSODEG00000012476)	NME6 (ENSODEG00000013578) #14	CDC25A (ENSODEG00000013712) #17	ENSODEG00000012608	ENSODEG00000013317	ENSODEG00000012770 #19	SMARCC1 (ENSODEG00000012505) #20	CSPG5 (ENSODEG00000012619) #21	ENSODEG00000012963 #22	SCAP (ENSODEG00000011782) #23	PTPN23 (ENSODEG00000013132) #24	ENSODEG00000011630	KLHL18 (ENSODEG00000012328) #25	KIF9 (ENSODEG00000012413) #26	SETD2 (ENSODEG00000012216) #27	ENSODEG00000012947	NBEAL2 (ENSODEG00000010896) #28	ENSODEG00000011621	CCDC12 (ENSODEG00000012202) #29	PTH1R (ENSODEG00000011074) #30	MYL3 (ENSODEG00000013412) #31	ENSODEG00000011281	ENSODEG00000010624	PRSS50 (ENSODEG00000013184) #32
Guinea pig	MODERN SPECIES	7	PARL (ENSCPOG00000013997)	MAP6D1 (ENSCPOG00000013222)	YEATS2 (ENSCPOG00000012531)	KLHL24 (ENSCPOG00000012123)	KLHL6 (ENSCPOG00000001890)	B3GNT5 (ENSCPOG00000035869)	ENSCPOG00000037382	OSBPL11 (ENSCPOG00000005842)	NME6 (ENSCPOG00000004702) #14	ENSCPOG00000009093 #16	CDC25A (ENSCPOG00000001225) #17	ENSCPOG00000022345	DHX30 (ENSCPOG00000000699) #19	SMARCC1 (ENSCPOG00000010153) #20	CSPG5 (ENSCPOG00000010149) #21	ELP6 (ENSCPOG00000006439) #22	SCAP (ENSCPOG00000026079) #23	PTPN23 (ENSCPOG00000024742) #24	ENSCPOG00000033065	KLHL18 (ENSCPOG00000002172) #25	KIF9 (ENSCPOG00000002165) #26	SETD2 (ENSCPOG00000008215) #27	ENSCPOG00000035419	NBEAL2 (ENSCPOG00000008167) #28	CCDC12 (ENSCPOG00000032515) #29	PTH1R (ENSCPOG00000003882) #30	MYL3 (ENSCPOG00000012609) #31	ENSCPOG00000009607	ENSCPOG00000000294	ENSCPOG00000020261	PRSS50 (ENSCPOG00000002321) #32
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000016720	ENSHGLG00000032671	ENSHGLG00000016738	ENSHGLG00000049353	ENSHGLG00000042646 #13	ENSHGLG00000037308 #14	ENSHGLG00000011422 #16	CDC25A (ENSHGLG00000011750) #17	ENSHGLG00000012040	ENSHGLG00000037757	MAP4 (ENSHGLG00000039957) #18	DHX30 (ENSHGLG00000012643) #19	ENSHGLG00000042510	SMARCC1 (ENSHGLG00000013300) #20	CSPG5 (ENSHGLG00000016793) #21	ELP6 (ENSHGLG00000049720) #22	ENSHGLG00000039177	ENSHGLG00000011335 #23	ENSHGLG00000043660 #24	ENSHGLG00000050840	KLHL18 (ENSHGLG00000045094) #25	KIF9 (ENSHGLG00000012534) #26	SETD2 (ENSHGLG00000037596) #27	ENSHGLG00000012965	NBEAL2 (ENSHGLG00000013814) #28	CCDC12 (ENSHGLG00000014058) #29	PTH1R (ENSHGLG00000014420) #30	MYL3 (ENSHGLG00000014498) #31	ENSHGLG00000039501	ENSHGLG00000007582	ENSHGLG00000016808
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000160464	ENSGT00390000000719	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.d	ENSGT00940000162829.b.c
Marmotini	ANCESTRAL SPECIES	12	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.a.l	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.d	ENSGT00940000162829.b.c
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.a.l	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00390000018390.yb	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000153169.A.b.b.a.a.a.b	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.d	ENSGT00940000162829.b.c	ENSGT00940000161932
Squirrel	MODERN SPECIES	196	CILP2 (ENSSTOG00000026823)	ENSSTOG00000019762	PBX4 (ENSSTOG00000007166)	LPAR2 (ENSSTOG00000021678)	GMIP (ENSSTOG00000007176)	ATP13A1 (ENSSTOG00000007205)	CAMP (ENSSTOG00000015157) #16	ENSSTOG00000034924	CDC25A (ENSSTOG00000015144) #17	ENSSTOG00000024015	ENSSTOG00000026772	DHX30 (ENSSTOG00000022367) #19	ENSSTOG00000034402	SMARCC1 (ENSSTOG00000008249) #20	CSPG5 (ENSSTOG00000022444) #21	ELP6 (ENSSTOG00000015970) #22	SCAP (ENSSTOG00000015965) #23	PTPN23 (ENSSTOG00000015955) #24	ENSSTOG00000026334	KLHL18 (ENSSTOG00000028599) #25	ENSSTOG00000014845 #26	SETD2 (ENSSTOG00000022116) #27	NBEAL2 (ENSSTOG00000003096) #28	CCDC12 (ENSSTOG00000003085) #29	PTH1R (ENSSTOG00000003066) #30	MYL3 (ENSSTOG00000003058) #31	ENSSTOG00000003052	ENSSTOG00000027518	ENSSTOG00000019671	ENSSTOG00000004832	ENSSTOG00000022128
Arctic ground squirrel	MODERN SPECIES	73	GMIP (ENSUPAG00010017934)	ATP13A1 (ENSUPAG00010017873)	ENSUPAG00010017861	ENSUPAG00010017854	ENSUPAG00010017852	CAMP (ENSUPAG00010017843) #16	ENSUPAG00010017839	CDC25A (ENSUPAG00010017812) #17	ENSUPAG00010017794	ENSUPAG00010017787	ENSUPAG00010017306	DHX30 (ENSUPAG00010017216) #19	ENSUPAG00010017204	SMARCC1 (ENSUPAG00010017138) #20	CSPG5 (ENSUPAG00010017126) #21	ELP6 (ENSUPAG00010017114) #22	SCAP (ENSUPAG00010017105) #23	PTPN23 (ENSUPAG00010017097) #24	ENSUPAG00010017093	KLHL18 (ENSUPAG00010017081) #25	KIF9 (ENSUPAG00010017029) #26	ENSUPAG00010017013	SETD2 (ENSUPAG00010016281) #27	PTH1R (ENSUPAG00010016258) #30	MYL3 (ENSUPAG00010016238) #31	ENSUPAG00010016232	ENSUPAG00010016165	ENSUPAG00010016148	ENSUPAG00010016109	ENSUPAG00010016085	ENSUPAG00010016067
Alpin marmot	MODERN SPECIES	24	ENSMMMG00000003852	ENSMMMG00000003860	ENSMMMG00000003867	ENSMMMG00000003887	CAMP (ENSMMMG00000003889) #16	ENSMMMG00000003899	ENSMMMG00000003905	CDC25A (ENSMMMG00000003916) #17	ENSMMMG00000004321	ENSMMMG00000004336	ENSMMMG00000004343	ENSMMMG00000004367	DHX30 (ENSMMMG00000004544) #19	SMARCC1 (ENSMMMG00000005131) #20	CSPG5 (ENSMMMG00000005719) #21	ELP6 (ENSMMMG00000005727) #22	SCAP (ENSMMMG00000005743) #23	ENSMMMG00000005771	ENSMMMG00000006140	KLHL18 (ENSMMMG00000006141) #25	KIF9 (ENSMMMG00000006191) #26	SETD2 (ENSMMMG00000006267) #27	NBEAL2 (ENSMMMG00000006514) #28	CCDC12 (ENSMMMG00000006784) #29	PTH1R (ENSMMMG00000006794) #30	MYL3 (ENSMMMG00000006838) #31	ENSMMMG00000006849	ENSMMMG00000006881	ENSMMMG00000006889	ENSMMMG00000006912	ENSMMMG00000006932
Eurasian red squirrel	MODERN SPECIES	7	ZNF670 (ENSSVLG00005018638)	ENSSVLG00005018685	ENSSVLG00005018729	ENSSVLG00005018742	CAMP (ENSSVLG00005018789) #16	CDC25A (ENSSVLG00005018830) #17	ENSSVLG00005018901	ENSSVLG00005018918	ENSSVLG00005018945	ENSSVLG00005018981	ENSSVLG00005019006	ENSSVLG00005019060	DHX30 (ENSSVLG00005019208) #19	ENSSVLG00005019381 #20	CSPG5 (ENSSVLG00005019529) #21	ELP6 (ENSSVLG00005019611) #22	SCAP (ENSSVLG00005019796) #23	ENSSVLG00005019989	ENSSVLG00005020103	KLHL18 (ENSSVLG00005020218) #25	KIF9 (ENSSVLG00005020299) #26	SETD2 (ENSSVLG00005020438) #27	CCDC12 (ENSSVLG00005022054) #29	PTH1R (ENSSVLG00005022129) #30	MYL3 (ENSSVLG00005022172) #31	ENSSVLG00005022233	ENSSVLG00005022314	ENSSVLG00005022421	ENSSVLG00005022474	ENSSVLG00005022586	ENSSVLG00005022619
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000011734 #22
Common shrew	MODERN SPECIES	4415																ELP6 (ENSSARG00000012106) #22
Hedgehog	MODERN SPECIES	5672																ELP6 (ENSEEUG00000008878) #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Suina	ANCESTRAL SPECIES	1	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000162829.b.b.a.a	ENSGT00940000161932	ENSGT00940000162940
Chacoan peccary	MODERN SPECIES	950	TREX1 (ENSCWAG00000014224) #7	ATRIP (ENSCWAG00000014098) #8	ENSCWAG00000014043 ##9	CCDC51 (ENSCWAG00000013996) #10	PLXNB1 (ENSCWAG00000013891) #11	SPINK8 (ENSCWAG00000013810) #13	NME6 (ENSCWAG00000013552) #14	ENSCWAG00000013301 #16	ENSCWAG00000013220 #16	CDC25A (ENSCWAG00000012942) #17	ENSCWAG00000012860	ENSCWAG00000012646	DHX30 (ENSCWAG00000012358) #19	SMARCC1 (ENSCWAG00000012078) #20	CSPG5 (ENSCWAG00000011800) #21	ELP6 (ENSCWAG00000019667) #22	SCAP (ENSCWAG00000019555) #23	ENSCWAG00000019516	PTPN23 (ENSCWAG00000019465) #24	ENSCWAG00000019436	KLHL18 (ENSCWAG00000019403) #25	KIF9 (ENSCWAG00000019337) #26	SETD2 (ENSCWAG00000019221) #27	ENSCWAG00000019201	NBEAL2 (ENSCWAG00000018944) #28	CCDC12 (ENSCWAG00000018884) #29	ENSCWAG00000018862	PTH1R (ENSCWAG00000018848) #30	MYL3 (ENSCWAG00000018812) #31	ENSCWAG00000018751	ENSCWAG00000018613
Pig	MODERN SPECIES	4	PMAP-36 (ENSSSCG00000045208) #16	NPG1 (ENSSSCG00000053313) #16	ENSSSCG00000011349 #16	PMAP-23 (ENSSSCG00000047135) #16	ENSSSCG00000008531	ENSSSCG00000052645 #16	ENSSSCG00000052135 #16	ENSSSCG00000033240	ENSSSCG00000011344	MAP4 (ENSSSCG00000029251) #18	DHX30 (ENSSSCG00000011342) #19	ENSSSCG00000062072	ENSSSCG00000062849	SMARCC1 (ENSSSCG00000011340) #20	CSPG5 (ENSSSCG00000039224) #21	ELP6 (ENSSSCG00000011336) #22	SCAP (ENSSSCG00000026281) #23	PTPN23 (ENSSSCG00000032957) #24	ENSSSCG00000011334	ENSSSCG00000052354	KLHL18 (ENSSSCG00000024513) #25	KIF9 (ENSSSCG00000040510) #26	SETD2 (ENSSSCG00000011332) #27	ENSSSCG00000054848	NBEAL2 (ENSSSCG00000011330) #28	CCDC12 (ENSSSCG00000011329) #29	PTH1R (ENSSSCG00000011326) #30	MYL3 (ENSSSCG00000011325) #31	ENSSSCG00000011324	ENSSSCG00000043557	ENSSSCG00000040146
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Camelidae	ANCESTRAL SPECIES	7	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00960000186612.B.a.b.a.a.a.a.b	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410.o.b #16	ENSGT00390000000410.p #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000162829.b.b.a.a	ENSGT00940000162829.b.a	ENSGT00940000161932
Arabian camel	MODERN SPECIES	8	ENSCDRG00005012455	SPINK8 (ENSCDRG00005012408) #13	NME6 (ENSCDRG00005012297) #14	ENSCDRG00005012257 #16	ENSCDRG00005011432 #16	ENSCDRG00005011336 #16	ENSCDRG00005011285 #16	ENSCDRG00005011154 #16	ENSCDRG00005011094 #16	ENSCDRG00005011044 #16	CDC25A (ENSCDRG00005010911) #17	MAP4 (ENSCDRG00005010194) #18	DHX30 (ENSCDRG00005009555) #19	SMARCC1 (ENSCDRG00005009381) #20	CSPG5 (ENSCDRG00005008894) #21	ELP6 (ENSCDRG00005008788) #22	SCAP (ENSCDRG00005008595) #23	PTPN23 (ENSCDRG00005008453) #24	ENSCDRG00005008398	KLHL18 (ENSCDRG00005008353) #25	KIF9 (ENSCDRG00005008138) #26	SETD2 (ENSCDRG00005007882) #27	ENSCDRG00005007814	NBEAL2 (ENSCDRG00005007348) #28	CCDC12 (ENSCDRG00005007287) #29	PTH1R (ENSCDRG00005007259) #30	MYL3 (ENSCDRG00005007200) #31	ENSCDRG00005007122	ENSCDRG00005006910	ENSCDRG00005006832	ENSCDRG00005006447
Alpaca	MODERN SPECIES	5993																ELP6 (ENSVPAG00000010293) #22
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410.m #16	ENSGT00390000000410.n.b #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Cetacea	ANCESTRAL SPECIES	7	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410.n.a.b.b #16	ENSGT00390000000410.n.a.b.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.b.b	ENSGT00940000161932
Blue whale	MODERN SPECIES	2	ENSBMSG00010009295 #16	ENSBMSG00010009287 #16	ENSBMSG00010009280 #16	ENSBMSG00010009270 #16	ENSBMSG00010009265 #16	ENSBMSG00010009254 #16	ENSBMSG00010009243 #16	ENSBMSG00010009232	ENSBMSG00010009221 #16	CDC25A (ENSBMSG00010020760) #17	ENSBMSG00010020746	ENSBMSG00010020650	DHX30 (ENSBMSG00010020487) #19	SMARCC1 (ENSBMSG00010020400) #20	CSPG5 (ENSBMSG00010020374) #21	ELP6 (ENSBMSG00010020341) #22	SCAP (ENSBMSG00010020289) #23	PTPN23 (ENSBMSG00010020252) #24	ENSBMSG00010020232	KLHL18 (ENSBMSG00010020214) #25	KIF9 (ENSBMSG00010020188) #26	SETD2 (ENSBMSG00010020087) #27	ENSBMSG00010020034	NBEAL2 (ENSBMSG00010019989) #28	CCDC12 (ENSBMSG00010019947) #29	PTH1R (ENSBMSG00010019915) #30	MYL3 (ENSBMSG00010019898) #31	ENSBMSG00010019887	ENSBMSG00010019880	ENSBMSG00010019867	TMIE (ENSBMSG00010019857) #34
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410.n.a.b.b #16	ENSGT00390000000410.n.a.a #16	ENSGT00390000000410.m.a.a.a #16	ENSGT00390000000410.n.a.b.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.b.b	ENSGT00940000161932
Sperm whale	MODERN SPECIES	9	UCN2 (ENSPCTG00005014571)	PFKFB4 (ENSPCTG00005014608)	SHISA5 (ENSPCTG00005015146)	NME6 (ENSPCTG00005015350) #14	ENSPCTG00005015622 #15	ENSPCTG00005015811 #16	ENSPCTG00005016171 #16	ENSPCTG00005016243 #16	ENSPCTG00005016443 #16	ENSPCTG00005016502	ENSPCTG00005016577 #16	CDC25A (ENSPCTG00005016693) #17	ENSPCTG00005016783	SMARCC1 (ENSPCTG00005016826) #20	CSPG5 (ENSPCTG00005017014) #21	ELP6 (ENSPCTG00005017277) #22	SCAP (ENSPCTG00005017356) #23	PTPN23 (ENSPCTG00005017618) #24	ENSPCTG00005017687	KLHL18 (ENSPCTG00005017742) #25	KIF9 (ENSPCTG00005017814) #26	SETD2 (ENSPCTG00005017981) #27	ENSPCTG00005018051	NBEAL2 (ENSPCTG00005018227) #28	CCDC12 (ENSPCTG00005019233) #29	PTH1R (ENSPCTG00005019315) #30	MYL3 (ENSPCTG00005019340) #31	ENSPCTG00005008996	ENSPCTG00005009187	PRSS45P (ENSPCTG00005009260)	ENSPCTG00005009389
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00940000164260 #15	ENSGT00390000000410.n.a.a #16	ENSGT00390000000410.m.a.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086.e #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.b.b.b	ENSGT00940000161932	ENSGT00940000162593 #32
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000160568.n	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00390000000410.m.a.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086.e #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.b.b.b	ENSGT00940000161932	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000160568.n	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00390000000410.m.a.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086.e #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000161932	ENSGT00940000162593 #32	ENSGT00390000005082 #34	ENSGT00940000161305 #35
Beluga whale	MODERN SPECIES	28	UQCRC1 (ENSDLEG00000020239)	UCN2 (ENSDLEG00000020414)	PFKFB4 (ENSDLEG00000020436)	SHISA5 (ENSDLEG00000020511)	TREX1 (ENSDLEG00000020519) #7	ATRIP (ENSDLEG00000020527) #8	CCDC51 (ENSDLEG00000020581) #10	PLXNB1 (ENSDLEG00000020596) #11	NME6 (ENSDLEG00000020629) #14	CAMP (ENSDLEG00000020639) #16	CDC25A (ENSDLEG00000020653) #17	ENSDLEG00000020695	DHX30 (ENSDLEG00000020739) #19	SMARCC1 (ENSDLEG00000020760) #20	CSPG5 (ENSDLEG00000020788) #21	ELP6 (ENSDLEG00000020791) #22	SCAP (ENSDLEG00000020799) #23	PTPN23 (ENSDLEG00000020815) #24	ENSDLEG00000020852	KLHL18 (ENSDLEG00000020861) #25	KIF9 (ENSDLEG00000020882) #26	ENSDLEG00000020925 #27	ENSDLEG00000020948	NBEAL2 (ENSDLEG00000020959) #28	CCDC12 (ENSDLEG00000020996) #29	PTH1R (ENSDLEG00000021004) #30	MYL3 (ENSDLEG00000021007) #31	ENSDLEG00000021012	ENSDLEG00000012423	ENSDLEG00000012428 #32	TMIE (ENSDLEG00000012430) #34
Narwhal	MODERN SPECIES	310	SHISA5 (ENSMMNG00015011478)	TREX1 (ENSMMNG00015011455) #7	ATRIP (ENSMMNG00015011407) #8	TMA7 (ENSMMNG00015011377) #9	CCDC51 (ENSMMNG00015011368) #10	PLXNB1 (ENSMMNG00015011301) #11	NME6 (ENSMMNG00015011226) #14	ENSMMNG00015011186 #15	ENSMMNG00015011171 #16	ENSMMNG00015011158 #16	CDC25A (ENSMMNG00015011102) #17	ENSMMNG00015010979	DHX30 (ENSMMNG00015010857) #19	SMARCC1 (ENSMMNG00015010755) #20	CSPG5 (ENSMMNG00015010722) #21	ELP6 (ENSMMNG00015010695) #22	SCAP (ENSMMNG00015010646) #23	PTPN23 (ENSMMNG00015010599) #24	ENSMMNG00015010573	KLHL18 (ENSMMNG00015010551) #25	KIF9 (ENSMMNG00015010508) #26	ENSMMNG00015010440 #27	ENSMMNG00015021792	NBEAL2 (ENSMMNG00015021687) #28	CCDC12 (ENSMMNG00015021625) #29	PTH1R (ENSMMNG00015021604) #30	MYL3 (ENSMMNG00015021594) #31	ENSMMNG00015021580	ENSMMNG00015021566 #32	TMIE (ENSMMNG00015021554) #34	ALS2CL (ENSMMNG00015021521) #35
Vaquita	MODERN SPECIES	2	ENSPSNG00000007698 #9	CCDC51 (ENSPSNG00000007716) #10	PLXNB1 (ENSPSNG00000007785) #11	NME6 (ENSPSNG00000008177) #14	ENSPSNG00000008338 #15	ENSPSNG00000008372 #16	ENSPSNG00000008423 #16	ENSPSNG00000008509 #16	ENSPSNG00000008530	ENSPSNG00000008576 #16	CDC25A (ENSPSNG00000008627) #17	ENSPSNG00000008726	DHX30 (ENSPSNG00000008928) #19	SMARCC1 (ENSPSNG00000009056) #20	CSPG5 (ENSPSNG00000009111) #21	ELP6 (ENSPSNG00000009231) #22	SCAP (ENSPSNG00000009285) #23	PTPN23 (ENSPSNG00000009385) #24	ENSPSNG00000009496	KLHL18 (ENSPSNG00000009541) #25	KIF9 (ENSPSNG00000009648) #26	ENSPSNG00000009788 #27	ENSPSNG00000009890	NBEAL2 (ENSPSNG00000010086) #28	CCDC12 (ENSPSNG00000010659) #29	PTH1R (ENSPSNG00000010744) #30	MYL3 (ENSPSNG00000010821) #31	ENSPSNG00000010901	ENSPSNG00000010980	ENSPSNG00000011053	TMIE (ENSPSNG00000011077) #34
Dolphin	MODERN SPECIES	2100												ENSTTRG00000002315	DHX30 (ENSTTRG00000002314) #19	SMARCC1 (ENSTTRG00000002305) #20	CSPG5 (ENSTTRG00000002301) #21	ELP6 (ENSTTRG00000002296) #22	SCAP (ENSTTRG00000002285) #23	PTPN23 (ENSTTRG00000002261) #24
Pecora	ANCESTRAL SPECIES	17	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.n.b.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Yarkand deer	MODERN SPECIES	16	ENSCHYG00000011996 #9	CCDC51 (ENSCHYG00000026375) #10	PLXNB1 (ENSCHYG00000026340) #11	SPINK8 (ENSCHYG00000026314) #13	NME6 (ENSCHYG00000026284) #14	ENSCHYG00000026226 #16	ENSCHYG00000026218 #16	ENSCHYG00000026164 #16	ENSCHYG00000026093 #16	CDC25A (ENSCHYG00000025918) #17	ENSCHYG00000025876	MAP4 (ENSCHYG00000025551) #18	DHX30 (ENSCHYG00000025200) #19	SMARCC1 (ENSCHYG00000025087) #20	CSPG5 (ENSCHYG00000025022) #21	ELP6 (ENSCHYG00000024977) #22	SCAP (ENSCHYG00000024787) #23	PTPN23 (ENSCHYG00000024640) #24	ENSCHYG00000024613	KLHL18 (ENSCHYG00000024589) #25	KIF9 (ENSCHYG00000024460) #26	SETD2 (ENSCHYG00000024370) #27	ENSCHYG00000024299	NBEAL2 (ENSCHYG00000024085) #28	CCDC12 (ENSCHYG00000023990) #29	PTH1R (ENSCHYG00000023797) #30	MYL3 (ENSCHYG00000023722) #31	ENSCHYG00000023699	ENSCHYG00000023682	ENSCHYG00000023654	ENSCHYG00000023593
Percora_a	ANCESTRAL SPECIES	19	ENSGT00960000186612.B.a.b.a.a.a.a.b	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.m.d #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Siberian musk deer	MODERN SPECIES	1221	SPINK8 (ENSMMSG00000022039) #13	NME6 (ENSMMSG00000021967) #14	ENSMMSG00000021940 #16	ENSMMSG00000021916 #16	ENSMMSG00000021896 #16	ENSMMSG00000021889 #16	ENSMMSG00000021876 #16	ENSMMSG00000021869 #16	CDC25A (ENSMMSG00000021780) #17	ENSMMSG00000021669	DHX30 (ENSMMSG00000021457) #19	ENSMMSG00000021398	ENSMMSG00000021378	SMARCC1 (ENSMMSG00000021284) #20	CSPG5 (ENSMMSG00000021192) #21	ELP6 (ENSMMSG00000021159) #22	SCAP (ENSMMSG00000021044) #23	PTPN23 (ENSMMSG00000020981) #24	ENSMMSG00000020970	KLHL18 (ENSMMSG00000020935) #25	KIF9 (ENSMMSG00000020809) #26	SETD2 (ENSMMSG00000020751) #27	ENSMMSG00000020733	NBEAL2 (ENSMMSG00000020307) #28	CCDC12 (ENSMMSG00000020186) #29	PTH1R (ENSMMSG00000020124) #30	MYL3 (ENSMMSG00000020101) #31	ENSMMSG00000020035	ENSMMSG00000019972	ENSMMSG00000019934	ENSMMSG00000019905
Bovidae	ANCESTRAL SPECIES	19	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.n.b.b #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.m.d #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134
Caprinae	ANCESTRAL SPECIES	15	ENSGT00390000003710.c.a.b.b ##9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00960000186612.B.a.b.a.a.a.a.b	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.n.b.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00910000148338	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Goat	MODERN SPECIES	14	NME6 (ENSCHIG00000026378) #14	MAP34-B (ENSCHIG00000010791) #16	ENSCHIG00000022773 #16	ENSCHIG00000023326 #16	BAC7.5 (ENSCHIG00000014601) #16	BAC5 (ENSCHIG00000023827) #16	MAP28 (ENSCHIG00000010735) #16	ENSCHIG00000019336 #16	ENSCHIG00000011988 #16	CDC25A (ENSCHIG00000023601) #17	ENSCHIG00000013955	ENSCHIG00000015243 #18	DHX30 (ENSCHIG00000017619) #19	SMARCC1 (ENSCHIG00000007133) #20	CSPG5 (ENSCHIG00000016240) #21	ELP6 (ENSCHIG00000008453) #22	SCAP (ENSCHIG00000007945) #23	PTPN23 (ENSCHIG00000009776) #24	ENSCHIG00000010192	KLHL18 (ENSCHIG00000010177) #25	ENSCHIG00000011179	KIF9 (ENSCHIG00000023247) #26	ENSCHIG00000002964	SETD2 (ENSCHIG00000018558) #27	ENSCHIG00000021095	NBEAL2 (ENSCHIG00000022993) #28	CCDC12 (ENSCHIG00000014512) #29	PTH1R (ENSCHIG00000007490) #30	MYL3 (ENSCHIG00000013889) #31	ENSCHIG00000015859	PRSS50 (ENSCHIG00000023869) #32
Rambouillet Sheep	MODERN SPECIES	10	ENSOARG00020024484	SPINK8 (ENSOARG00020024495) #13	ENSOARG00020024532 #14	Map-34 (ENSOARG00020024627) #16	CATHL1A (ENSOARG00020024644) #16	CATHL1B (ENSOARG00020024674) #16	ENSOARG00020024743 #16	ENSOARG00020024766 #16	CATHL3 (ENSOARG00020024775) #16	BAC5 (ENSOARG00020024793) #16	SC5 (ENSOARG00020024803) #16	CDC25A (ENSOARG00020024843) #17	DHX30 (ENSOARG00020024964) #19	SMARCC1 (ENSOARG00020025146) #20	CSPG5 (ENSOARG00020025218) #21	ELP6 (ENSOARG00020025254) #22	SCAP (ENSOARG00020010537) #23	PTPN23 (ENSOARG00020010676) #24	ENSOARG00020010889	KLHL18 (ENSOARG00020011088) #25	KIF9 (ENSOARG00020011253) #26	ENSOARG00020011774	SETD2 (ENSOARG00020011798) #27	ENSOARG00020011968	NBEAL2 (ENSOARG00020012503) #28	CCDC12 (ENSOARG00020024802) #29	PTH1R (ENSOARG00020024826) #30	MYL3 (ENSOARG00020024858) #31	ENSOARG00020024870	ENSOARG00020024887	ENSOARG00020024902
Bovinae	ANCESTRAL SPECIES	16	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.n.b.b #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.m.d #16	ENSGT00390000000410.m.c.a.b.b #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
American bison	MODERN SPECIES	3340				ENSBBBG00000016264 #16	ENSBBBG00000016231 #16	ENSBBBG00000016138 #16	ENSBBBG00000016101 #16	ENSBBBG00000016032 #16	ENSBBBG00000016009 #16	CDC25A (ENSBBBG00000015964) #17	ENSBBBG00000015860	ENSBBBG00000003941	DHX30 (ENSBBBG00000015800) #19	SMARCC1 (ENSBBBG00000015717) #20	CSPG5 (ENSBBBG00000015677) #21	ELP6 (ENSBBBG00000015664) #22	ENSBBBG00000003903	PTPN23 (ENSBBBG00000003443) #24	ENSBBBG00000015602 #24	ENSBBBG00000003892	KLHL18 (ENSBBBG00000015587) #25	KIF9 (ENSBBBG00000003870) #26	ENSBBBG00000008029	SETD2 (ENSBBBG00000003831) #27	ENSBBBG00000001270	NBEAL2 (ENSBBBG00000001294) #28	CCDC12 (ENSBBBG00000003800) #29	PTH1R (ENSBBBG00000015265) #30	MYL3 (ENSBBBG00000008028) #31	ENSBBBG00000002775	ENSBBBG00000007557
Bos	ANCESTRAL SPECIES	16	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00960000186612.B.a.b.a.a.a.a.b	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.n.b.b #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a
Bos_b	ANCESTRAL SPECIES	17	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.m.d #16	ENSGT00390000000410.m.c.a.b.b #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00390000000410.n.b.a.a #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.b.a	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134
Cow	MODERN SPECIES	14	CAMP (ENSBTAG00000003022) #16	CATHL3 (ENSBTAG00000013356) #16	ENSBTAG00000052903 #16	CATHL4 (ENSBTAG00000053016) #16	ENSBTAG00000039879 #16	ENSBTAG00000016153 #16	CATHL2 (ENSBTAG00000024852) #16	ENSBTAG00000031594 #16	CATHL6 (ENSBTAG00000049629) #16	CATHL5 (ENSBTAG00000020076) #16	CDC25A (ENSBTAG00000009586) #17	MAP4 (ENSBTAG00000015839) #18	DHX30 (ENSBTAG00000015833) #19	SMARCC1 (ENSBTAG00000031567) #20	CSPG5 (ENSBTAG00000002309) #21	ELP6 (ENSBTAG00000011478) #22	SCAP (ENSBTAG00000015782) #23	ENSBTAG00000051878	PTPN23 (ENSBTAG00000002774) #24	NGP (ENSBTAG00000031519)	ENSBTAG00000055088	KLHL18 (ENSBTAG00000006573) #25	KIF9 (ENSBTAG00000019841) #26	ENSBTAG00000050457	ENSBTAG00000053089	SETD2 (ENSBTAG00000002948) #27	NRADD (ENSBTAG00000022598)	CCDC12 (ENSBTAG00000011311) #29	PTH1R (ENSBTAG00000016948) #30	MYL3 (ENSBTAG00000008394) #31	PRSS42 (ENSBTAG00000031454)
Hybrid Bos Indicus	MODERN SPECIES	14	TMA7 (ENSBIXG00005019043) #9	CCDC51 (ENSBIXG00005019062) #10	PLXNB1 (ENSBIXG00005019458) #11	ENSBIXG00005019523	SPINK8 (ENSBIXG00005019540) #13	NME6 (ENSBIXG00005019696) #14	ENSBIXG00005019850 #16	ENSBIXG00005019983 #16	ENSBIXG00005020021 #16	ENSBIXG00005006819 #16	CDC25A (ENSBIXG00005007298) #17	MAP4 (ENSBIXG00005006038) #18	DHX30 (ENSBIXG00005020547) #19	SMARCC1 (ENSBIXG00005020633) #20	CSPG5 (ENSBIXG00005020692) #21	ELP6 (ENSBIXG00005020729) #22	SCAP (ENSBIXG00005020823) #23	ENSBIXG00005020853	KLHL18 (ENSBIXG00005003528) #25	ENSBIXG00005020891	KIF9 (ENSBIXG00005006154) #26	ENSBIXG00005003595	SETD2 (ENSBIXG00005021314) #27	ENSBIXG00005021339	NBEAL2 (ENSBIXG00005021523) #28	CCDC12 (ENSBIXG00005003634) #29	PTH1R (ENSBIXG00005021588) #30	MYL3 (ENSBIXG00005021611) #31	ENSBIXG00005021727	ENSBIXG00005021859	ENSBIXG00005021939
Bos_a	ANCESTRAL SPECIES	9	ENSGT00940000160284 #14	ENSGT00390000000410.m.c.a.b.a #16	ENSGT00390000000410.n.b.b #16	ENSGT00390000000410.m.c.b #16	ENSGT00390000000410.m.c.a.a.a.b #16	ENSGT00390000000410.m.c.a.a.b #16	ENSGT00390000000410.m.c.a.a.a.a #16	ENSGT00390000000410.m.d #16	ENSGT00390000000410.m.c.a.b.b #16	ENSGT00390000000410.n.b.a.b #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000164270.a.a.b.b	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b.b.a.b
Domestic yak	MODERN SPECIES	14	ENSBGRG00000020686	SPINK8 (ENSBGRG00000020655) #13	NME6 (ENSBGRG00000020497) #14	ENSBGRG00000020474 #16	ENSBGRG00000020459 #16	ENSBGRG00000020385 #16	ENSBGRG00000020339 #16	ENSBGRG00000020321 #16	ENSBGRG00000020261 #16	ENSBGRG00000020199 #16	CATHL6 (ENSBGRG00000019951) #16	Cdc25A (ENSBGRG00000019593) #17	MAP4 (ENSBGRG00000018621) #18	DHX30 (ENSBGRG00000018279) #19	SMARCC1 (ENSBGRG00000017707) #20	ELP6 (ENSBGRG00000017529) #22	SCAP (ENSBGRG00000017277) #23	PTPN23 (ENSBGRG00000016529) #24	ENSBGRG00000016465	KLHL18 (ENSBGRG00000016290) #25	ENSBGRG00000016267	SETD2 (ENSBGRG00000015668) #27	ENSBGRG00000015579	KIF9 (ENSBGRG00000015116) #26	NBEAL2 (ENSBGRG00000013674) #28	CCDC12 (ENSBGRG00000013566) #29	PTH1R (ENSBGRG00000013310) #30	MYL3 (ENSBGRG00000013193) #31	ENSBGRG00000013164	ENSBGRG00000012967	ENSBGRG00000012942
Wild yak	MODERN SPECIES	2765											CDC25A (ENSBMUG00000011212) #17	MAP4 (ENSBMUG00000011364) #18	DHX30 (ENSBMUG00000012136) #19	SMARCC1 (ENSBMUG00000013101) #20	CSPG5 (ENSBMUG00000013119) #21	ENSBMUG00000013146 #22	SCAP (ENSBMUG00000013221) #23	PTPN23 (ENSBMUG00000014286) #24	ENSBMUG00000015303	KLHL18 (ENSBMUG00000015312) #25	KIF9 (ENSBMUG00000015408) #26	ENSBMUG00000015464	SETD2 (ENSBMUG00000015495) #27	ENSBMUG00000015508	NBEAL2 (ENSBMUG00000016839) #28	CCDC12 (ENSBMUG00000017202) #29	PTH1R (ENSBMUG00000017483) #30	MYL3 (ENSBMUG00000017567) #31
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000012850 #8	ENSGT00940000170238	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00910000148747	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Polar bear	MODERN SPECIES	255	TREX1 (ENSUMAG00000000635) #7	ATRIP (ENSUMAG00000000650) #8	ENSUMAG00000000667	TMA7 (ENSUMAG00000000676) #9	CCDC51 (ENSUMAG00000000685) #10	FBXW12 (ENSUMAG00000000804) #12	ENSUMAG00000000814 #13	NME6 (ENSUMAG00000000834) #14	ENSUMAG00000000848 #16	CDC25A (ENSUMAG00000000866) #17	ENSUMAG00000001107	ENSUMAG00000001143	DHX30 (ENSUMAG00000001274) #19	SMARCC1 (ENSUMAG00000002353) #20	CSPG5 (ENSUMAG00000002992) #21	ELP6 (ENSUMAG00000002998) #22	SCAP (ENSUMAG00000003046) #23	ENSUMAG00000003353	PTPN23 (ENSUMAG00000003443) #24	KLHL18 (ENSUMAG00000003962) #25	KIF9 (ENSUMAG00000004015) #26	SETD2 (ENSUMAG00000004095) #27	ENSUMAG00000004103	NBEAL2 (ENSUMAG00000004119) #28	CCDC12 (ENSUMAG00000004346) #29	ENSUMAG00000004357 #30	MYL3 (ENSUMAG00000004371) #31	ENSUMAG00000004375	ENSUMAG00000004380	ENSUMAG00000004387	ENSUMAG00000004410
American black bear	MODERN SPECIES	2286																ELP6 (ENSUAMG00000019956) #22	SCAP (ENSUAMG00000019983) #23	ENSUAMG00000020535	PTPN23 (ENSUAMG00000020539) #24	ENSUAMG00000020762 #25
Giant Panda	MODERN SPECIES	14	PFKFB4 (ENSAMEG00000001043)	SHISA5 (ENSAMEG00000001145)	ATRIP (ENSAMEG00000001151) #8	TMA7 (ENSAMEG00000001193) #9	CCDC51 (ENSAMEG00000029640) #10	PLXNB1 (ENSAMEG00000001203) #11	FBXW12 (ENSAMEG00000001338) #12	SPINK8 (ENSAMEG00000027209) #13	ENSAMEG00000001373 #14	CAMP (ENSAMEG00000001387) #16	CDC25A (ENSAMEG00000001398) #17	MAP4 (ENSAMEG00000013152) #18	DHX30 (ENSAMEG00000013112) #19	SMARCC1 (ENSAMEG00000013014) #20	CSPG5 (ENSAMEG00000013011) #21	ELP6 (ENSAMEG00000012996) #22	SCAP (ENSAMEG00000012941) #23	PTPN23 (ENSAMEG00000012896) #24	KLHL18 (ENSAMEG00000012830) #25	KIF9 (ENSAMEG00000012793) #26	SETD2 (ENSAMEG00000012781) #27	ENSAMEG00000024482	NBEAL2 (ENSAMEG00000012660) #28	CCDC12 (ENSAMEG00000012658) #29	ENSAMEG00000026708 #30	ENSAMEG00000024468 #31	ENSAMEG00000023805	ENSAMEG00000029662	ENSAMEG00000031194	ENSAMEG00000012564	ENSAMEG00000012561
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Ferret	MODERN SPECIES	238	ENSMPUG00000014544	PFKFB4 (ENSMPUG00000014914)	SHISA5 (ENSMPUG00000014918)	TREX1 (ENSMPUG00000019650) #7	ATRIP (ENSMPUG00000014930) #8	CCDC51 (ENSMPUG00000014935) #10	PLXNB1 (ENSMPUG00000014938) #11	FBXW12 (ENSMPUG00000014945) #12	NME6 (ENSMPUG00000014972) #14	CAMP (ENSMPUG00000014975) #16	CDC25A (ENSMPUG00000014977) #17	ENSMPUG00000014981	DHX30 (ENSMPUG00000015013) #19	SMARCC1 (ENSMPUG00000015015) #20	CSPG5 (ENSMPUG00000015017) #21	ELP6 (ENSMPUG00000015018) #22	SCAP (ENSMPUG00000015019) #23	ENSMPUG00000015021 #24	KLHL18 (ENSMPUG00000015034) #25	KIF9 (ENSMPUG00000015037) #26	ENSMPUG00000015042	SETD2 (ENSMPUG00000015045) #27	ENSMPUG00000015067	NBEAL2 (ENSMPUG00000015073) #28	ENSMPUG00000015080 #29	PTH1R (ENSMPUG00000015082) #30	MYL3 (ENSMPUG00000015146) #31	ENSMPUG00000015150	ENSMPUG00000015154	ENSMPUG00000015156	ENSMPUG00000015157
American mink	MODERN SPECIES	58	PFKFB4 (ENSNVIG00000023297)	SHISA5 (ENSNVIG00000023288)	TREX1 (ENSNVIG00000023286) #7	ATRIP (ENSNVIG00000023265) #8	TMA7 (ENSNVIG00000023260) #9	CCDC51 (ENSNVIG00000023248) #10	PLXNB1 (ENSNVIG00000023203) #11	ENSNVIG00000023195 #12	NDK6 (ENSNVIG00000023186) #14	CAMP (ENSNVIG00000023183) #16	CDC25A (ENSNVIG00000023165) #17	ENSNVIG00000023134	DHX30 (ENSNVIG00000023104) #19	SMARCC1 (ENSNVIG00000022669) #20	CSPG5 (ENSNVIG00000022624) #21	ELP6 (ENSNVIG00000022620) #22	ENSNVIG00000022613	SCAP (ENSNVIG00000022337) #23	PTPN23 (ENSNVIG00000022301) #24	KLHL18 (ENSNVIG00000022291) #25	KIF9 (ENSNVIG00000022187) #26	SETD2 (ENSNVIG00000022105) #27	ENSNVIG00000022094	NBEAL2 (ENSNVIG00000022053) #28	CCDC12 (ENSNVIG00000022032) #29	PTH1R (ENSNVIG00000021951) #30	MYL3 (ENSNVIG00000021938) #31	ENSNVIG00000021926	ENSNVIG00000021879	ENSNVIG00000021871	ENSNVIG00000021859
Canidae	ANCESTRAL SPECIES		ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000012652.ab.a	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Dingo	MODERN SPECIES	112															ENSCAFG00020014949	ELP6 (ENSCAFG00020014948) #22	SCAP (ENSCAFG00020014938) #23	PTPN23 (ENSCAFG00020014932) #24	KLHL18 (ENSCAFG00020014921) #25	ENSCAFG00020014918 #26	SETD2 (ENSCAFG00020014806) #27	ENSCAFG00020014799	NBEAL2 (ENSCAFG00020014132) #28	CCDC12 (ENSCAFG00020014024) #29	PTH1R (ENSCAFG00020014014) #30	MYL3 (ENSCAFG00020013992) #31	ENSCAFG00020013976	ENSCAFG00020013953	ENSCAFG00020013932	ENSCAFG00020013928	ENSCAFG00020013919
Dog	MODERN SPECIES	12	ATRIP (ENSCAFG00845006308) #8	TMA7 (ENSCAFG00845006383) #9	CCDC51 (ENSCAFG00845006402) #10	PLXNB1 (ENSCAFG00845006452) #11	FBXW12 (ENSCAFG00845006725) #12	SPINK8 (ENSCAFG00845006805) #13	ENSCAFG00845006949	NME6 (ENSCAFG00845007158) #14	CAMP (ENSCAFG00845007235) #16	CDC25A (ENSCAFG00845007301) #17	MAP4 (ENSCAFG00845007720) #18	DHX30 (ENSCAFG00845008323) #19	SMARCC1 (ENSCAFG00845008451) #20	CSPG5 (ENSCAFG00845008635) #21	ENSCAFG00845008748	ELP6 (ENSCAFG00845008773) #22	SCAP (ENSCAFG00845008845) #23	PTPN23 (ENSCAFG00845008987) #24	KLHL18 (ENSCAFG00845009371) #25	KIF9 (ENSCAFG00845009471) #26	SETD2 (ENSCAFG00845009790) #27	NRADD (ENSCAFG00845010072)	NBEAL2 (ENSCAFG00845010217) #28	CCDC12 (ENSCAFG00845010928) #29	PTH1R (ENSCAFG00845010997) #30	MYL3 (ENSCAFG00845011176) #31	ENSCAFG00845011274	ENSCAFG00845011399	PRSS50 (ENSCAFG00845011561) #32	TMIE (ENSCAFG00845011588) #34	ALS2CL (ENSCAFG00845011639) #35
Red fox	MODERN SPECIES	5	UCN2 (ENSVVUG00000029730)	PFKFB4 (ENSVVUG00000029734)	SHISA5 (ENSVVUG00000029737)	TREX1 (ENSVVUG00000029738) #7	ATRIP (ENSVVUG00000029747) #8	CCDC51 (ENSVVUG00000029756) #10	ENSVVUG00000029776 #12	NME6 (ENSVVUG00000029778) #14	CAMP (ENSVVUG00000029779) #16	CDC25A (ENSVVUG00000029781) #17	ENSVVUG00000029783	MAP4 (ENSVVUG00000029788)	DHX30 (ENSVVUG00000029792) #19	SMARCC1 (ENSVVUG00000029795) #20	CSPG5 (ENSVVUG00000029808) #21	ELP6 (ENSVVUG00000029814) #22	SCAP (ENSVVUG00000000038) #23	PTPN23 (ENSVVUG00000002068) #24	KLHL18 (ENSVVUG00000003468) #25	KIF9 (ENSVVUG00000003479) #26	SETD2 (ENSVVUG00000003511) #27	ENSVVUG00000003556	NBEAL2 (ENSVVUG00000003652) #28	CCDC12 (ENSVVUG00000004582) #29	PTH1R (ENSVVUG00000004619) #30	MYL3 (ENSVVUG00000005008) #31	PRSS42 (ENSVVUG00000005011)	ENSVVUG00000005017	ENSVVUG00000005024	ENSVVUG00000005028	ENSVVUG00000005032 #32
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Tiger	MODERN SPECIES	281	TREX1 (ENSPTIG00000006601) #7	ATRIP (ENSPTIG00000016280) #8	ENSPTIG00000016250 ##9	CCDC51 (ENSPTIG00000016210) #10	PLXNB1 (ENSPTIG00000016066) #11	ENSPTIG00000016021 #12	ENSPTIG00000015985	NME6 (ENSPTIG00000015913) #14	CAMP (ENSPTIG00000015881) #16	CDC25A (ENSPTIG00000015823) #17	ENSPTIG00000015786	ENSPTIG00000015772	DHX30 (ENSPTIG00000015582) #19	SMARCC1 (ENSPTIG00000015498) #20	CSPG5 (ENSPTIG00000015479) #21	ELP6 (ENSPTIG00000015449) #22	SCAP (ENSPTIG00000015428) #23	KLHL18 (ENSPTIG00000015268) #25	KIF9 (ENSPTIG00000015105) #26	SETD2 (ENSPTIG00000015030) #27	ENSPTIG00000015002	NBEAL2 (ENSPTIG00000014904) #28	CCDC12 (ENSPTIG00000014875) #29	PTH1R (ENSPTIG00000014822) #30	MYL3 (ENSPTIG00000014810) #31	ENSPTIG00000014807	ENSPTIG00000014795	ENSPTIG00000014789	PRSS50 (ENSPTIG00000014680) #32	TMIE (ENSPTIG00000014672) #34	ALS2CL (ENSPTIG00000014603) #35
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
lion	MODERN SPECIES	2	SHISA5 (ENSPLOG00000013364)	TREX1 (ENSPLOG00000013323) #7	ATRIP (ENSPLOG00000013039) #8	TMA7 (ENSPLOG00000012949) #9	CCDC51 (ENSPLOG00000012900) #10	PLXNB1 (ENSPLOG00000012329) #11	FBXW12 (ENSPLOG00000012054) #12	SPINK8 (ENSPLOG00000011969) #13	NME6 (ENSPLOG00000011819) #14	CAMP (ENSPLOG00000011786) #16	CDC25A (ENSPLOG00000011545) #17	ENSPLOG00000011366	DHX30 (ENSPLOG00000011067) #19	SMARCC1 (ENSPLOG00000010839) #20	CSPG5 (ENSPLOG00000010607) #21	ELP6 (ENSPLOG00000010562) #22	SCAP (ENSPLOG00000003427) #23	KLHL18 (ENSPLOG00000003346) #25	KIF9 (ENSPLOG00000003316) #26	SETD2 (ENSPLOG00000003264) #27	ENSPLOG00000003227	NBEAL2 (ENSPLOG00000003027) #28	CCDC12 (ENSPLOG00000002826) #29	PTH1R (ENSPLOG00000002798) #30	MYL3 (ENSPLOG00000002771) #31	ENSPLOG00000002735	ENSPLOG00000002690	ENSPLOG00000002656	ENSPLOG00000002625	PRSS50 (ENSPLOG00000002584) #32	TMIE (ENSPLOG00000002558) #34
leopard	MODERN SPECIES	68	ATRIP (ENSPPRG00000004974) #8	ENSPPRG00000007402 ##9	CCDC51 (ENSPPRG00000007777) #10	PLXNB1 (ENSPPRG00000009709) #11	ENSPPRG00000009932 #12	SPINK8 (ENSPPRG00000010293) #13	NME6 (ENSPPRG00000012209) #14	CAMP (ENSPPRG00000012470) #16	CDC25A (ENSPPRG00000013158) #17	ENSPPRG00000013515	ENSPPRG00000014672	DHX30 (ENSPPRG00000022811) #19	SMARCC1 (ENSPPRG00000000113) #20	CSPG5 (ENSPPRG00000000365) #21	ENSPPRG00000001869	ELP6 (ENSPPRG00000002371) #22	SCAP (ENSPPRG00000003522) #23	PTPN23 (ENSPPRG00000004323) #24	KLHL18 (ENSPPRG00000005490) #25	KIF9 (ENSPPRG00000007301) #26	ENSPPRG00000008506	SETD2 (ENSPPRG00000008991) #27	ENSPPRG00000010154	NBEAL2 (ENSPPRG00000012827) #28	CCDC12 (ENSPPRG00000013547) #29	PTH1R (ENSPPRG00000016608) #30	MYL3 (ENSPPRG00000017289) #31	ENSPPRG00000018134	ENSPPRG00000019868	ENSPPRG00000020386	PRSS50 (ENSPPRG00000022448) #32
Cat	MODERN SPECIES	1	TREX1 (ENSFCAG00000018562) #7	ATRIP (ENSFCAG00000002094) #8	TMA7 (ENSFCAG00000042284) #9	CCDC51 (ENSFCAG00000014469) #10	PLXNB1 (ENSFCAG00000002093) #11	FBXW12 (ENSFCAG00000002091) #12	SPINK8 (ENSFCAG00000042500) #13	NME6 (ENSFCAG00000000503) #14	CAMP (ENSFCAG00000008790) #16	CDC25A (ENSFCAG00000008785) #17	MAP4 (ENSFCAG00000008782)	ENSFCAG00000050079	DHX30 (ENSFCAG00000000438) #19	SMARCC1 (ENSFCAG00000015481) #20	CSPG5 (ENSFCAG00000023106) #21	ELP6 (ENSFCAG00000015480) #22	SCAP (ENSFCAG00000015479) #23	PTPN23 (ENSFCAG00000015478) #24	KLHL18 (ENSFCAG00000015477) #25	KIF9 (ENSFCAG00000015476) #26	SETD2 (ENSFCAG00000019287) #27	NRADD (ENSFCAG00000023441)	NBEAL2 (ENSFCAG00000015475) #28	CCDC12 (ENSFCAG00000015474) #29	PTH1R (ENSFCAG00000015473) #30	MYL3 (ENSFCAG00000042196) #31	ENSFCAG00000015471	ENSFCAG00000047745	ENSFCAG00000052201	ENSFCAG00000028729	ENSFCAG00000028955
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b	ENSGT00940000161932
Equus	ANCESTRAL SPECIES	5	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.b.a.a #9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00520000060726.b #13	ENSGT00940000173712	ENSGT00390000000410.r #16	ENSGT00390000000410.q.a #16	ENSGT00940000160737 #17	ENSGT00390000006922.m.b.b.a.z.r	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT01070000257287	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000163712	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000162829.b
Horse	MODERN SPECIES	7	ATRIP (ENSECAG00000010784) #8	CCDC51 (ENSECAG00000014543) #10	TMA7 (ENSECAG00000043666) #9	PLXNB1 (ENSECAG00000014767) #11	ENSECAG00000048129	SPINK8 (ENSECAG00000041010) #13	NME6 (ENSECAG00000012881)	ENSECAG00000013712 #16	ENSECAG00000029296 #16	ENSECAG00000016046 #16	CDC25A (ENSECAG00000016336) #17	ENSECAG00000053017	MAP4 (ENSECAG00000003775) #18	DHX30 (ENSECAG00000015670) #19	SMARCC1 (ENSECAG00000007760) #20	ELP6 (ENSECAG00000024036) #22	SCAP (ENSECAG00000024420) #23	PTPN23 (ENSECAG00000016755) #24	ENSECAG00000024557	ENSECAG00000024563	KIF9 (ENSECAG00000025122) #26	KLHL18 (ENSECAG00000024577) #25	ENSECAG00000008501	SETD2 (ENSECAG00000009721) #27	NRADD (ENSECAG00000015037)	NBEAL2 (ENSECAG00000015086) #28	CCDC12 (ENSECAG00000008649) #29	PTH1R (ENSECAG00000008888) #30	MYL3 (ENSECAG00000017410) #31	ENSECAG00000037341	ENSECAG00000019244
Donkey	MODERN SPECIES	13	ENSEASG00005029015 ##9	CCDC51 (ENSEASG00005009089) #10	PLXNB1 (ENSEASG00005008996) #11	SPINK8 (ENSEASG00005034103) #13	ENSEASG00005008913	CATH1 (ENSEASG00005008904) #16	ENSEASG00005008901 #16	CDC25A (ENSEASG00005008828) #17	ENSEASG00005024472	ENSEASG00005033940	ENSEASG00005029145	DHX30 (ENSEASG00005008553) #19	ENSEASG00005031652	SMARCC1 (ENSEASG00005008512) #20	CSPG5 (ENSEASG00005008511) #21	ELP6 (ENSEASG00005008506) #22	SCAP (ENSEASG00005008417) #23	ENSEASG00005007128	PTPN23 (ENSEASG00005008222) #24	ENSEASG00005027937	KLHL18 (ENSEASG00005008191) #25	KIF9 (ENSEASG00005008182) #26	ENSEASG00005034902	SETD2 (ENSEASG00005008173) #27	ENSEASG00005008169	NBEAL2 (ENSEASG00005008157) #28	CCDC12 (ENSEASG00005008148) #29	PTH1R (ENSEASG00005008141) #30	MYL3 (ENSEASG00005008137) #31	ENSEASG00005036729	ENSEASG00005038746
Chiroptera	ANCESTRAL SPECIES	19	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.a ##9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940
Microchiroptera	ANCESTRAL SPECIES	16	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000003710.c.a.a ##9	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00520000060726.b #13	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.a	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32
Greater horseshoe bat	MODERN SPECIES	8	TREX1 (ENSRFEG00010009227) #7	ATRIP (ENSRFEG00010009256) #8	ENSRFEG00010009306 ##9	CCDC51 (ENSRFEG00010009343) #10	PLXNB1 (ENSRFEG00010009393) #11	ENSRFEG00010009479 #12	SPINK8 (ENSRFEG00010009675) #13	NME6 (ENSRFEG00010009736) #14	CAMP (ENSRFEG00010009904) #16	CDC25A (ENSRFEG00010009931) #17	MAP4 (ENSRFEG00010010043) #18	ENSRFEG00010010277	DHX30 (ENSRFEG00010010331) #19	SMARCC1 (ENSRFEG00010010455) #20	CSPG5 (ENSRFEG00010010552) #21	ELP6 (ENSRFEG00010010670) #22	SCAP (ENSRFEG00010010753) #23	PTPN23 (ENSRFEG00010010849) #24	ENSRFEG00010010917	KLHL18 (ENSRFEG00010010955) #25	KIF9 (ENSRFEG00010011015) #26	SETD2 (ENSRFEG00010011221) #27	ENSRFEG00010011613	NBEAL2 (ENSRFEG00010011711) #28	MYL3 (ENSRFEG00010015295) #31	PTH1R (ENSRFEG00010015528) #30	ENSRFEG00010015785	ENSRFEG00010015837	ENSRFEG00010015985	ENSRFEG00010016015	PRSS50 (ENSRFEG00010016152) #32
Microbat	MODERN SPECIES	1480										ENSMLUG00000011239 #17	ENSMLUG00000025987 #18	ENSMLUG00000026425	ENSMLUG00000013401	SMARCC1 (ENSMLUG00000001483) #20	ENSMLUG00000026048 #21	ELP6 (ENSMLUG00000002167) #22	SCAP (ENSMLUG00000004086) #23	PTPN23 (ENSMLUG00000015548) #24	ENSMLUG00000029618	KLHL18 (ENSMLUG00000015533) #25	KIF9 (ENSMLUG00000015501) #26	SETD2 (ENSMLUG00000010072) #27
Megabat	MODERN SPECIES	2975																ELP6 (ENSPVAG00000013400) #22	SCAP (ENSPVAG00000013398) #23	PTPN23 (ENSPVAG00000013397) #24
Atlantogenata	ANCESTRAL SPECIES	30	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012715.b #7	ENSGT00390000012850 #8	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000162557 #12	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000162829.b	ENSGT00940000161932	ENSGT00940000162940
Afrotheria	ANCESTRAL SPECIES	29	ENSGT00940000164160	ENSGT00940000160568.n	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012850 #8	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Tenrec	MODERN SPECIES	5513															CSPG5 (ENSETEG00000007471) #21	ELP6 (ENSETEG00000007469) #22
Afrotheria_a	ANCESTRAL SPECIES	30	ENSGT00940000158931	ENSGT00940000160568.n	ENSGT00950000182835.c.d	ENSGT00390000008296.b.a.b	ENSGT00390000012850 #8	ENSGT00390000001709 #10	ENSGT01020000230394.e.a.a.b.a.a.a #11	ENSGT00940000160284 #14	ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000163134	ENSGT00940000161932	ENSGT00940000162940	ENSGT00940000162593 #32	ENSGT00390000005082 #34
Elephant	MODERN SPECIES	49	ATRIP (ENSLAFG00000015186) #8	CCDC51 (ENSLAFG00000000529) #10	PLXNB1 (ENSLAFG00000022692) #11	ENSLAFG00000016664	ENSLAFG00000025854	ENSLAFG00000016672	NME6 (ENSLAFG00000029214) #14	CAMP (ENSLAFG00000004571) #16	ENSLAFG00000031018 #16	CDC25A (ENSLAFG00000006358) #17	ENSLAFG00000009704	ENSLAFG00000029027 #18	DHX30 (ENSLAFG00000028880) #19	SMARCC1 (ENSLAFG00000009694) #20	CSPG5 (ENSLAFG00000009692) #21	ELP6 (ENSLAFG00000010495) #22	SCAP (ENSLAFG00000003046) #23	PTPN23 (ENSLAFG00000016163) #24	ENSLAFG00000030512	KLHL18 (ENSLAFG00000006672) #25	KIF9 (ENSLAFG00000006666) #26	SETD2 (ENSLAFG00000003303) #27	ENSLAFG00000027011	NBEAL2 (ENSLAFG00000000666) #28	ENSLAFG00000022573 #29	PTH1R (ENSLAFG00000013158) #30	MYL3 (ENSLAFG00000015871) #31	ENSLAFG00000016896	ENSLAFG00000010905	ENSLAFG00000031922	PRSS50 (ENSLAFG00000010901) #32
Hyrax	MODERN SPECIES	11658																ELP6 (ENSPCAG00000012189) #22
Xenarthra	ANCESTRAL SPECIES	374										ENSGT00390000000410 #16	ENSGT00940000160737 #17	ENSGT00940000164123 #18	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00730000111701	ENSGT00940000157026 #25	ENSGT00940000158533 #26
Armadillo	MODERN SPECIES	647								CAMP (ENSDNOG00000012347) #16	ENSDNOG00000036956 #16	CDC25A (ENSDNOG00000002897) #17	ENSDNOG00000032288	MAP4 (ENSDNOG00000035691) #18	DHX30 (ENSDNOG00000018833) #19	SMARCC1 (ENSDNOG00000019321) #20	CSPG5 (ENSDNOG00000032967) #21	ELP6 (ENSDNOG00000043277) #22	SCAP (ENSDNOG00000045110) #23	PTPN23 (ENSDNOG00000034309) #24	ENSDNOG00000041964	ENSDNOG00000044859	KLHL18 (ENSDNOG00000005618) #25	KIF9 (ENSDNOG00000008882) #26	ENSDNOG00000036551	SETD2 (ENSDNOG00000001337) #27
Sloth	MODERN SPECIES	13612																ELP6 (ENSCHOG00000004940) #22
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00390000012715.b #7	ENSGT00390000008296.b.a.b	ENSGT00950000182835.c.d	ENSGT00970000198419	ENSGT00940000164282	ENSGT00390000006976	ENSGT00940000159597	ENSGT00940000158053	ENSGT00390000000410.b.a.a #16	ENSGT00390000000410.b.a.b #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000000410.b.b #16	ENSGT00390000000410.a.a #16	ENSGT00390000000410.a.b #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.c
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00390000012850 #8	ENSGT00390000012715.b #7	ENSGT00950000182835.c.d	ENSGT00970000198419	ENSGT00940000164282	ENSGT00390000006976	ENSGT00940000159597	ENSGT00940000158053	ENSGT00390000000410.b.a.a #16	ENSGT00390000000410.b.a.b #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00950000186385	ENSGT00390000000410.a.a #16	ENSGT00390000000410.a.b #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.c
Diprotodontia	ANCESTRAL SPECIES	19	ENSGT00390000003710 #9	ENSGT00390000012850 #8	ENSGT00390000012715.b #7	ENSGT00950000182835.c.d	ENSGT00970000198419	ENSGT00940000164282	ENSGT00390000006976	ENSGT00940000158053	ENSGT00390000000410.b.a.a #16	ENSGT00390000000410.b.a.b #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00950000186385	ENSGT00390000000410.a.a #16	ENSGT00390000000410.a.b #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.c	ENSGT00940000161932.b
Diprotodontia_a	ANCESTRAL SPECIES	21	ENSGT00390000003710 #9	ENSGT00390000012850 #8	ENSGT00390000012715.b #7	ENSGT00950000182835.c.d	ENSGT00970000198419	ENSGT00940000164282	ENSGT00390000006976	ENSGT00940000158053	ENSGT00390000000410.b.a.a #16	ENSGT00390000000410.b.a.b #16	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT01010000227169	ENSGT00390000000410.a.a #16	ENSGT00390000000410.a.b #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000163571	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30	ENSGT01030000234570.d.b.a.b.b.b #31	ENSGT00940000162829.c	ENSGT00940000161932.b
koala	MODERN SPECIES	75	ENSPCIG00000010149	ENSPCIG00000010158	ENSPCIG00000010160	ENSPCIG00000010161	MYO1G (ENSPCIG00000010174)	ENSPCIG00000031534 #16	ENSPCIG00000004744 #16	ENSPCIG00000023358	CDC25A (ENSPCIG00000013503) #17	ENSPCIG00000013499	DHX30 (ENSPCIG00000013492) #19	ENSPCIG00000032780	ENSPCIG00000037381	SMARCC1 (ENSPCIG00000027398) #20	ENSPCIG00000037348	ELP6 (ENSPCIG00000025980) #22	SCAP (ENSPCIG00000025979) #23	PTPN23 (ENSPCIG00000025977) #24	ENSPCIG00000034698	ENSPCIG00000025971	ENSPCIG00000025970 #16	ENSPCIG00000025968 #16	KLHL18 (ENSPCIG00000025967) #25	KIF9 (ENSPCIG00000025965) #26	ENSPCIG00000025954 #27	ENSPCIG00000037247 #27	ENSPCIG00000025953	NBEAL2 (ENSPCIG00000025947) #28	CCDC12 (ENSPCIG00000025941) #29	PTH1R (ENSPCIG00000025925) #30	MYL3 (ENSPCIG00000006157) #31
Common wonbat	MODERN SPECIES	1091										CDC25A (ENSVURG00010012996) #17	ENSVURG00010012920	DHX30 (ENSVURG00010012843) #19	ENSVURG00010012833	SMARCC1 (ENSVURG00010011782) #20	CSPG5 (ENSVURG00010011709) #21	ELP6 (ENSVURG00010011694) #22	SCAP (ENSVURG00010011651) #23	PTPN23 (ENSVURG00010011617) #24	ENSVURG00010011612	ENSVURG00010011607 #16	ENSVURG00010011597	ENSVURG00010011590 #16	ENSVURG00010011583 #16	KLHL18 (ENSVURG00010011555) #25	KIF9 (ENSVURG00010011536) #26	ENSVURG00010011526 #27	ENSVURG00010011508	NBEAL2 (ENSVURG00010011244) #28	CCDC12 (ENSVURG00010011216) #29	PTH1R (ENSVURG00010011202) #30	ENSVURG00010011192 #31
Wallaby	MODERN SPECIES	6873																ENSMEUG00000005529 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000020709	ENSSHAG00000017055	ENSSHAG00000002144	ENSSHAG00000032358 #16	ENSSHAG00000000832 #16	ENSSHAG00000022991	ENSSHAG00000024949 #16	CDC25A (ENSSHAG00000004204) #17	ENSSHAG00000023174	ENSSHAG00000021147	DHX30 (ENSSHAG00000006980) #19	ENSSHAG00000032330	ENSSHAG00000031494	SMARCC1 (ENSSHAG00000000895) #20	CSPG5 (ENSSHAG00000004557) #21	ELP6 (ENSSHAG00000006115) #22	SCAP (ENSSHAG00000007011) #23	PTPN23 (ENSSHAG00000007547) #24	ENSSHAG00000007816 #16	ENSSHAG00000008157	ENSSHAG00000008643 #16	KLHL18 (ENSSHAG00000008923) #25	KIF9 (ENSSHAG00000009655) #26	ENSSHAG00000010081	SETD2 (ENSSHAG00000010781) #27	ENSSHAG00000011454	NBEAL2 (ENSSHAG00000011530) #28	CCDC12 (ENSSHAG00000021055) #29	PTH1R (ENSSHAG00000002214) #30	MYL3 (ENSSHAG00000006447) #31	ENSSHAG00000022564
Opossum	MODERN SPECIES	5	ENSMODG00000014355	ENSMODG00000014350	ENSMODG00000042813	ENSMODG00000014342	SUSD3 (ENSMODG00000049848)	ENSMODG00000014333	MYO1G (ENSMODG00000014320)	ENSMODG00000014312 #16	ENSMODG00000028672 #16	CDC25A (ENSMODG00000014306) #17	ENSMODG00000014294	DHX30 (ENSMODG00000014285) #19	ENSMODG00000041389	SMARCC1 (ENSMODG00000014207) #20	CSPG5 (ENSMODG00000014181) #21	ELP6 (ENSMODG00000014160) #22	SCAP (ENSMODG00000014155) #23	ENSMODG00000045773 #24	ENSMODG00000041793	ENSMODG00000028095 #16	ENSMODG00000027493 #16	ENSMODG00000028307 #16	ENSMODG00000044210	ENSMODG00000042431 #16	KLHL18 (ENSMODG00000014078) #25	KIF9 (ENSMODG00000014066) #26	ENSMODG00000022962	SETD2 (ENSMODG00000014043) #27	ENSMODG00000014002	NBEAL2 (ENSMODG00000013995) #28	ENSMODG00000013967 #29
Platypus	MODERN SPECIES	4	TBRG4 (ENSOANG00000015366)	ENSOANG00000039426	ENSOANG00000044459	CCM2 (ENSOANG00000015753)	MYO1G (ENSOANG00000013380)	ENSOANG00000011030 #16	ENSOANG00000010609 #16	ENSOANG00000046196 #16	ENSOANG00000010610 #16	CDC25A (ENSOANG00000037441) #17	ENSOANG00000050714	ENSOANG00000043559 #19	ENSOANG00000010513 #19	SMARCC1 (ENSOANG00000009305) #20	CSPG5 (ENSOANG00000038338) #21	ENSOANG00000043868 #22	ENSOANG00000039989	ENSOANG00000039837 #16	KLHL18 (ENSOANG00000047602) #25	KIF9 (ENSOANG00000038541) #26	ENSOANG00000050792 #27	ENSOANG00000048638	NBEAL2 (ENSOANG00000044193) #28	ENSOANG00000004262 #16	ENSOANG00000050324 #16	CCDC12 (ENSOANG00000044446) #29	PTH1R (ENSOANG00000039996) #30	MYL3 (ENSOANG00000005484) #31	ENSOANG00000046262	ENSOANG00000037642 #35	ENSOANG00000042376
Sauria	ANCESTRAL SPECIES	53									ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000162081
Lepidosauria	ANCESTRAL SPECIES	133									ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a
Episquamata	ANCESTRAL SPECIES	36											ENSGT00940000155153.A.a	ENSGT00940000162651	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a
Toxicofera	ANCESTRAL SPECIES	64					ENSGT00940000162942.g.a.b.a	ENSGT00940000162942.g.b	ENSGT00940000155153.B.b	ENSGT00940000155153.A.a	ENSGT00940000162364.b	ENSGT00940000155153.B.a	ENSGT00940000161747.p	ENSGT00940000162651	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501.ab
Lizard	DUPLICATION
Lizard	MODERN SPECIES	419																ENSACAG00000013931 #22
Lizard	MODERN SPECIES	164																ENSACAG00000004015 #22
Elapidae	ANCESTRAL SPECIES	67											ENSGT00940000154420.B.e.b.a	ENSGT00940000161747.o.a.a.a	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a
Elapidae_a	ANCESTRAL SPECIES	149											ENSGT00940000154420.B.e.b.a	ENSGT00940000161747.o.a.a.a	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a
Acanthophiinae	ANCESTRAL SPECIES	116				ENSGT00940000162942.g.a.b.a	ENSGT00940000162942.g.b	ENSGT00940000154420.B.e.b.a	ENSGT00940000161747.o.a.a.a	ENSGT00940000155153.C.a.b	ENSGT00940000155153.B.b	ENSGT00940000155153.A.a	ENSGT00940000161747.p	ENSGT00940000162651	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000171891	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a
Eastern brown snake	MODERN SPECIES	154	ENSPTXG00000017414	ENSPTXG00000017413	ENSPTXG00000017411	ENSPTXG00000017408	ENSPTXG00000017405	ENSPTXG00000017402	ENSPTXG00000017398	ENSPTXG00000017396	ENSPTXG00000017390	ENSPTXG00000017387	ENSPTXG00000017382	ENSPTXG00000017381	DHX30 (ENSPTXG00000017135) #19	ENSPTXG00000017119	SMARCC1 (ENSPTXG00000016682) #20	ELP6 (ENSPTXG00000016658) #22	ENSPTXG00000016656	ENSPTXG00000016646	SCAP (ENSPTXG00000016643) #23	PTPN23 (ENSPTXG00000016632) #24	MYO1G (ENSPTXG00000016591)	CCM2 (ENSPTXG00000016582)
Mainland tiger snake	MODERN SPECIES	239	ENSNSUG00000011779	ENSNSUG00000011780	ENSNSUG00000011781	ENSNSUG00000011782	ENSNSUG00000011783	ENSNSUG00000011784	ENSNSUG00000011785	ENSNSUG00000011786	ENSNSUG00000011787	ENSNSUG00000011788	ENSNSUG00000011790	ENSNSUG00000011794	DHX30 (ENSNSUG00000011796) #19	SMARCC1 (ENSNSUG00000011808) #20	CSPG5 (ENSNSUG00000012605) #21	ELP6 (ENSNSUG00000012607) #22	SCAP (ENSNSUG00000012608) #23	ENSNSUG00000012610	ENSNSUG00000012611 #24	ENSNSUG00000012614 #24	ENSNSUG00000012615	MYO1G (ENSNSUG00000012616)	CCM2 (ENSNSUG00000012619)
Blue-lipped sea krait	MODERN SPECIES	1958																ELP6 (ENSLLTG00000009963) #22	ENSLLTG00000009952	SCAP (ENSLLTG00000009757) #23
Indian cobra	MODERN SPECIES	337	ENSNNAG00000008261	BPNT2 (ENSNNAG00000008231)	GALNT4 (ENSNNAG00000008216)	ENSNNAG00000008191	EHD3 (ENSNNAG00000008108)	NDUFA4 (ENSNNAG00000008090)	ENSNNAG00000008084	SMARCC1 (ENSNNAG00000008002) #20	DHX30 (ENSNNAG00000007665) #19	ENSNNAG00000007618	ENSNNAG00000007606	ENSNNAG00000018827	ENSNNAG00000018822	ENSNNAG00000018810	ENSNNAG00000018805	ELP6 (ENSNNAG00000018801) #22	ENSNNAG00000018798	ENSNNAG00000018791	ENSNNAG00000018787	ENSNNAG00000018784	CCDC12 (ENSNNAG00000018781) #29	ENSNNAG00000018778 #26	KLHL18 (ENSNNAG00000018775) #25
Laterata	ANCESTRAL SPECIES	70					ENSGT00940000164953	ENSGT00940000162364.b	ENSGT00940000162942.g.a.b.a	ENSGT00940000162942.g.b	ENSGT00940000162364.a.b	ENSGT00940000155153.B	ENSGT00940000162942.h.a.b	ENSGT00940000162651	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a
Argentine black and white tegu	MODERN SPECIES	5	ENSSMRG00000017282	ENSSMRG00000017281	ENSSMRG00000017280	ENSSMRG00000017279	ENSSMRG00000017278	ENSSMRG00000017277	ENSSMRG00000017251	ENSSMRG00000017250	ENSSMRG00000017249	ENSSMRG00000017248	ENSSMRG00000017246	ENSSMRG00000017245	DHX30 (ENSSMRG00000017243) #19	SMARCC1 (ENSSMRG00000017236) #20	CSPG5 (ENSSMRG00000017226) #21	ELP6 (ENSSMRG00000017223) #22	SCAP (ENSSMRG00000017220) #23	PTPN23 (ENSSMRG00000017218) #24	ENSSMRG00000017216	ENSSMRG00000017213	ENSSMRG00000017198	CCM2 (ENSSMRG00000017195)	ENSSMRG00000017194	TBRG4 (ENSSMRG00000017193)	ENSSMRG00000017190	GHITM (ENSSMRG00000017189)	KCNA5 (ENSSMRG00000017181)	SNRNP48 (ENSSMRG00000017177)	ENSSMRG00000017140	BCDIN3D (ENSSMRG00000017138)	ADIPOR1 (ENSSMRG00000017136)
tuatara	MODERN SPECIES	1912					ENSSPUG00000019118	ENSSPUG00000019120	ENSSPUG00000019121	ENSSPUG00000019123	CDC25A (ENSSPUG00000019125) #17	ENSSPUG00000019127	ENSSPUG00000019136	DHX30 (ENSSPUG00000019160) #19	ENSSPUG00000019165	SMARCC1 (ENSSPUG00000019170) #20	CSPG5 (ENSSPUG00000019173) #21	ELP6 (ENSSPUG00000019175) #22	SCAP (ENSSPUG00000019176) #23	ENSSPUG00000019177	ENSSPUG00000019179	ENSSPUG00000019181	ENSSPUG00000019187 #24	ENSSPUG00000019189 #24	ENSSPUG00000019191	ENSSPUG00000019193	ENSSPUG00000019196
Archelosauria	ANCESTRAL SPECIES	6								ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410 #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000165573
Archosauria	ANCESTRAL SPECIES										ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00960000190383	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410 #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000166800	ENSGT00940000160086 #27
Aves	ANCESTRAL SPECIES	5									ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410 #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00390000018786	ENSGT00940000158454 #28
Neognathae	ANCESTRAL SPECIES		ENSGT00940000165535	ENSGT00940000162081	ENSGT00940000159126	ENSGT00390000014839.a	ENSGT00940000161389	ENSGT00940000159846	ENSGT00950000183207.a	ENSGT00940000161747.p	ENSGT00940000155153.B	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib #16	ENSGT00950000185398	ENSGT00390000000410.jb #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00390000018786
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000166024	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000162651	ENSGT00940000155153.A.a	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT01070000257267	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib #16	ENSGT00390000000410.jb #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00390000018786
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000165561	ENSGT01070000257151	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000162651	ENSGT00940000155153.A.a	ENSGT00940000161747.p	ENSGT00940000155153.B	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.j	ENSGT01070000257267	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000159509.z.a	ENSGT00940000159600	ENSGT00940000157015	ENSGT00940000159858	ENSGT00940000157362	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360
Phasianidae_b	ANCESTRAL SPECIES	1							ENSGT00940000162942.h.a	ENSGT00940000162364.b	ENSGT00940000164953	ENSGT00940000160737 #17	ENSGT00940000159742.j	ENSGT01070000257267	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000159509.z.a	ENSGT00940000159600	ENSGT00940000157015	ENSGT00940000159858	ENSGT00940000157362	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Chicken	MODERN SPECIES	11	ENSGALG00010027242	ZNF767 (ENSGALG00010027246)	ENSGALG00010027248	ENSGALG00010027250	ENSGALG00010027251	ENSGALG00010027255	ENSGALG00010027259	ENSGALG00010027261	ENSGALG00010027264	CDC25A (ENSGALG00010027269) #17	ENSGALG00010027276	ENSGALG00010027281	DHX30 (ENSGALG00010027287) #19	SMARCC1 (ENSGALG00010027289) #20	CSPG5 (ENSGALG00010027290) #21	ELP6 (ENSGALG00010027293) #22	SCAP (ENSGALG00010027301) #23	ENSGALG00010027302	PTPN23 (ENSGALG00010027304) #24	ENSGALG00010027306	ENSGALG00010027308	ENSGALG00010027309	ENSGALG00010027312	MINDY4 (ENSGALG00010027329)	AQP1 (ENSGALG00010027337)	GHRHR (ENSGALG00010027343)	ADCYAP1R1 (ENSGALG00010027355)	GHRHR-LR (ENSGALG00010027357)	VIPR1 (ENSGALG00010027363)	SEC22C (ENSGALG00010027367)	NKTR (ENSGALG00010027374)
Turkey	MODERN SPECIES	26	ENSMGAG00000022180	ENSMGAG00000022879	ENSMGAG00000001163	ENSMGAG00000016479	ENSMGAG00000019974	ENSMGAG00000021127	ENSMGAG00000001147	ENSMGAG00000018537	ENSMGAG00000020502	ENSMGAG00000001066	ENSMGAG00000001071	DHX30 (ENSMGAG00000001216) #19	SMARCC1 (ENSMGAG00000001339) #20	CSPG5 (ENSMGAG00000001588) #21	ENSMGAG00000021618	ELP6 (ENSMGAG00000001465) #22	SCAP (ENSMGAG00000001605) #23	PTPN23 (ENSMGAG00000001686) #24	ENSMGAG00000001590	MINDY4 (ENSMGAG00000001713)	AQP1 (ENSMGAG00000001745)	GHRHR (ENSMGAG00000001769)	ADCYAP1R1 (ENSMGAG00000018268)	ENSMGAG00000002081	VIPR1 (ENSMGAG00000001795)	SEC22C (ENSMGAG00000002268)	NKTR (ENSMGAG00000002292)	ZBTB47 (ENSMGAG00000002353)	ENSMGAG00000002375	HHATL (ENSMGAG00000002393)	CCDC13 (ENSMGAG00000002402)
Japanese quail	MODERN SPECIES	11	ENSCJPG00005008017	ENSCJPG00005008018	ENSCJPG00005008019	ENSCJPG00005008053	ENSCJPG00005008056	TIGD3 (ENSCJPG00005008057)	ENSCJPG00005008059	ZNF777 (ENSCJPG00005008061)	ENSCJPG00005008069	ENSCJPG00005008070	CDC25A (ENSCJPG00005008072) #17	ENSCJPG00005008078	DHX30 (ENSCJPG00005008079) #19	SMARCC1 (ENSCJPG00005009276) #20	CSPG5 (ENSCJPG00005010113) #21	ELP6 (ENSCJPG00005010114) #22	SCAP (ENSCJPG00005010115) #23	PTPN23 (ENSCJPG00005010348) #24	ENSCJPG00005010496	ENSCJPG00005010497	MINDY4 (ENSCJPG00005010498)	AQP1 (ENSCJPG00005010499)	GHRHR (ENSCJPG00005010500)	ADCYAP1R1 (ENSCJPG00005010502)	ENSCJPG00005010503	VIPR1 (ENSCJPG00005010504)	SEC22C (ENSCJPG00005010506)	NKTR (ENSCJPG00005010507)	ENSCJPG00005010508	ZBTB47 (ENSCJPG00005010509)	KLHL40 (ENSCJPG00005010510)
Anatidae	ANCESTRAL SPECIES	1							ENSGT00940000162942.h.a	ENSGT00940000155153.B	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT01070000257267	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00940000158454 #28	ENSGT00390000011619 #29	ENSGT00940000158574 #30
Pink-footed goose	MODERN SPECIES	334							ENSABRG00000005295	ENSABRG00000005285	ENSABRG00000005279	CDC25A (ENSABRG00000005264) #17	ENSABRG00000005187	ENSABRG00000005168	DHX30 (ENSABRG00000005144) #19	SMARCC1 (ENSABRG00000005118) #20	CSPG5 (ENSABRG00000005110) #21	ELP6 (ENSABRG00000005099) #22	ENSABRG00000005087	SCAP (ENSABRG00000005055) #23	PTPN23 (ENSABRG00000004194) #24	MYO1G (ENSABRG00000004138)	ENSABRG00000004097	CCM2 (ENSABRG00000004086)	ENSABRG00000004068
Neognathae_b	ANCESTRAL SPECIES	9	ENSGT00940000162942.h.a	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000162651	ENSGT00940000155153.A.a	ENSGT00940000155153.B	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib #16	ENSGT00390000000410.jb #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00390000018786	ENSGT00390000011619 #29
Neognathae_c	ANCESTRAL SPECIES	12	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00940000161688	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000162651	ENSGT00940000155153.A.a	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00990000210430	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib #16	ENSGT00390000000410.jb #16	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00390000018786	ENSGT00390000011619 #29
Golden eagle	MODERN SPECIES	19	ENSACCG00020015700	ENSACCG00020015691	ENSACCG00020015682	ENSACCG00020015659	ENSACCG00020015602	ENSACCG00020015593	ENSACCG00020015581	CDC25A (ENSACCG00020015568) #17	ENSACCG00020015558	ENSACCG00020015525	DHX30 (ENSACCG00020015467) #19	ENSACCG00020015446	ENSACCG00020015432 #20	ENSACCG00020015393 #20	CSPG5 (ENSACCG00020015367) #21	ELP6 (ENSACCG00020015346) #22	SCAP (ENSACCG00020015317) #23	MYO1G (ENSACCG00020015231)	CCM2 (ENSACCG00020015183)	ENSACCG00020015168	ENSACCG00020015160	TBRG4 (ENSACCG00020015122)	ENSACCG00020015106 #16	ENSACCG00020015078 #16	KLHL18 (ENSACCG00020015049) #25	KIF9 (ENSACCG00020014934) #26	SETD2 (ENSACCG00020014831) #27	ENSACCG00020014795	CCDC12 (ENSACCG00020014293) #29	PTH1R (ENSACCG00020014276) #30	ENSACCG00020014254
Kakapo	MODERN SPECIES		ENSSHBG00005005472	ZNF282 (ENSSHBG00005005483)	ENSSHBG00005005495	TIGD3 (ENSSHBG00005005511)	ENSSHBG00005005554	ENSSHBG00005005619	ENSSHBG00005005675	ENSSHBG00005005691	CDC25A (ENSSHBG00005005706) #17	ENSSHBG00005000843	ENSSHBG00005001287	DHX30 (ENSSHBG00005001314) #19	ENSSHBG00005001338	SMARCC1 (ENSSHBG00005001354) #20	CSPG5 (ENSSHBG00005001393) #21	ELP6 (ENSSHBG00005001412) #22	SCAP (ENSSHBG00005001434) #23	ENSSHBG00005001471	ENSSHBG00005001501 #24	ENSSHBG00005001535 #24	MYO1G (ENSSHBG00005002002)	CCM2 (ENSSHBG00005002919)	NACAD (ENSSHBG00005002940)	TBRG4 (ENSSHBG00005002957)	ENSSHBG00005002998	ENSSHBG00005003007 #16	KLHL18 (ENSSHBG00005003023) #25	KIF9 (ENSSHBG00005003045) #26	SETD2 (ENSSHBG00005003069) #27	ENSSHBG00005003081	ENSSHBG00005003101
Passeriformes	ANCESTRAL SPECIES		ENSGT00390000000410.jb #16	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000168101.a	ENSGT00940000155153.B	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000159742.i.a	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000160805	ENSGT00940000158259	ENSGT01030000234607.A.a.a.b	ENSGT00390000014069.a	ENSGT00940000159586
Great tit	MODERN SPECIES	11	ENSPMJG00000003357	ENSPMJG00000003353	ENSPMJG00000003352	ENSPMJG00000003348	ENSPMJG00000003345	ENSPMJG00000003340	ENSPMJG00000003338	ENSPMJG00000003333	ZNF777 (ENSPMJG00000003318)	CDC25A (ENSPMJG00000003307) #17	ENSPMJG00000003299	ENSPMJG00000003279	DHX30 (ENSPMJG00000003269) #19	SMARCC1 (ENSPMJG00000003035) #20	CSPG5 (ENSPMJG00000003005) #21	ELP6 (ENSPMJG00000002984) #22
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000155153.C.a.a	ENSGT00940000166024	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000168101.a	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.i.a	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000160805	ENSGT00940000158259	ENSGT01030000234607.A.a.a.b	ENSGT00390000014069.a	ENSGT00940000159586
Flycatcher	MODERN SPECIES	11	ENSFALG00000028481	ENSFALG00000027924	ENSFALG00000001971	ENSFALG00000001977	ENSFALG00000028764	ENSFALG00000001980	ENSFALG00000026081	ENSFALG00000001987	CDC25A (ENSFALG00000001992) #17	ENSFALG00000027815	ENSFALG00000002003	ENSFALG00000026536	DHX30 (ENSFALG00000002009) #19	SMARCC1 (ENSFALG00000002035) #20	CSPG5 (ENSFALG00000002068) #21	ELP6 (ENSFALG00000024848) #22	SCAP (ENSFALG00000002078) #23	PTPN23 (ENSFALG00000002089) #24	CDK5 (ENSFALG00000013070)	SLC4A2 (ENSFALG00000013084)	FASTK (ENSFALG00000013118)	ENSFALG00000025825	ENSFALG00000013154	ENSFALG00000027833	GBX1 (ENSFALG00000013190)	ASB10 (ENSFALG00000013197)	ABCF2 (ENSFALG00000013201)	CHPF2 (ENSFALG00000013203)	ENSFALG00000025394
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT00940000166024	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000168101.a	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.j	ENSGT00940000159742.i.b	ENSGT00940000159742.i.a	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000153335.b	ENSGT00940000158259	ENSGT01030000234607.A.a.a.b	ENSGT00390000014069.a	ENSGT00940000159586
Passeroidea	ANCESTRAL SPECIES	6	ENSGT00940000166024	ENSGT00960000189381	ENSGT00940000155153.C.a.b	ENSGT00960000189325	ENSGT00940000161885	ENSGT00450000040324.a	ENSGT00940000168101.a	ENSGT01030000234669.A.e.a.a.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.i.a	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00950000183207.a	ENSGT00940000159846	ENSGT00940000161389	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000153335.b	ENSGT00940000158259	ENSGT01030000234607.A.a.a.b	ENSGT00390000014069.a	ENSGT00940000159586
Common canary	MODERN SPECIES	5	ENSSCAG00000005661	ENSSCAG00000005658	ENSSCAG00000005657	ENSSCAG00000005652	ENSSCAG00000005650	ENSSCAG00000005646	ENSSCAG00000005641	ENSSCAG00000005637	CDC25A (ENSSCAG00000005630) #17	ENSSCAG00000005628	ENSSCAG00000005625	ENSSCAG00000005606	ENSSCAG00000005602	DHX30 (ENSSCAG00000005596) #19	SMARCC1 (ENSSCAG00000005390) #20	ELP6 (ENSSCAG00000005356) #22	ENSSCAG00000005355	ENSSCAG00000005351	PTPN23 (ENSSCAG00000005271) #24	CCM2 (ENSSCAG00000005217)
Zebra finch	MODERN SPECIES	12	ENSTGUG00000026982	ENSTGUG00000020172	ENSTGUG00000020776	ENSTGUG00000025051	ENSTGUG00000019458	ENSTGUG00000023521	ENSTGUG00000000090	ENSTGUG00000000094	CDC25A (ENSTGUG00000000097) #17	ENSTGUG00000021805	DHX30 (ENSTGUG00000000112) #19	SMARCC1 (ENSTGUG00000000119) #20	ENSTGUG00000021989	ENSTGUG00000029656	CSPG5 (ENSTGUG00000021868) #21	ELP6 (ENSTGUG00000000144) #22	SCAP (ENSTGUG00000020198) #23	PTPN23 (ENSTGUG00000023335) #24	ENSTGUG00000027867	CCM2 (ENSTGUG00000015039)	ENSTGUG00000028355	TBRG4 (ENSTGUG00000025170)	ENSTGUG00000029731	ENSTGUG00000025915	ENSTGUG00000021399	LRRC61 (ENSTGUG00000019017)	RARRES2 (ENSTGUG00000029580)	ENSTGUG00000018971	ENSTGUG00000023107	AOC1 (ENSTGUG00000027317)	KCNH2 (ENSTGUG00000026324)
Medium ground finch	MODERN SPECIES	406																ELP6 (ENSGFOG00000005146) #22	SCAP (ENSGFOG00000005187) #23	CCM2 (ENSGFOG00000005357)
African ostrich	MODERN SPECIES	941							ENSSCUG00000018091	ENSSCUG00000018093	ENSSCUG00000018097	CDC25A (ENSSCUG00000018101) #17	ENSSCUG00000018106	DHX30 (ENSSCUG00000018108) #19	ENSSCUG00000018111	ENSSCUG00000018112	SMARCC1 (ENSSCUG00000018114) #20	ELP6 (ENSSCUG00000018121) #22	SCAP (ENSSCUG00000018123) #23	PTPN23 (ENSSCUG00000018128) #24	CCM2 (ENSSCUG00000018142)	ENSSCUG00000018143	TBRG4 (ENSSCUG00000018144)	KLHL18 (ENSSCUG00000018147) #25	KIF9 (ENSSCUG00000018149) #26	SETD2 (ENSSCUG00000018151) #27	ENSSCUG00000018157	CCDC12 (ENSSCUG00000016200) #29	PTH1R (ENSSCUG00000016202) #30	MYL3 (ENSSCUG00000016212) #31	ENSSCUG00000016215	ALS2CL (ENSSCUG00000016221) #35	JMJD4 (ENSSCUG00000016225)
Australian saltwater crocodile	MODERN SPECIES		ENSCPRG00005001633	ENSCPRG00005001641	ENSCPRG00005001646	ENSCPRG00005001654	ENSCPRG00005001724	ENSCPRG00005001727	ENSCPRG00005001728	ENSCPRG00005001729	ENSCPRG00005001730	ENSCPRG00005001735	ENSCPRG00005001743	CDC25A (ENSCPRG00005001747) #17	ENSCPRG00005001814	DHX30 (ENSCPRG00005001822) #19	SMARCC1 (ENSCPRG00005001885) #20	ELP6 (ENSCPRG00005001896) #22	SCAP (ENSCPRG00005001897) #23	ENSCPRG00005001903	PTPN23 (ENSCPRG00005001909) #24	ENSCPRG00005001916	ENSCPRG00005001921	MYO1G (ENSCPRG00005001924)	MINDY4 (ENSCPRG00005001985)	AQP1 (ENSCPRG00005002003)	GHRHR (ENSCPRG00005002020)	ADCYAP1R1 (ENSCPRG00005002121)	ENSCPRG00005002132	ENSCPRG00005002174	VIPR1 (ENSCPRG00005002258)	SEC22C (ENSCPRG00005002376)	NKTR (ENSCPRG00005002399)
Cryptodira	ANCESTRAL SPECIES	4								ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.kb.a.a #16	ENSGT01100000264012	ENSGT00390000000410.lb #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00960000187104	ENSGT00940000155153.C.b	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000162942.h.b.a.a	ENSGT01100000263519.E.b.b.a.a.a.a.b.a	ENSGT01080000257839.b	ENSGT01030000235175.b.a.b	ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.kb.a.a #16	ENSGT01100000264012	ENSGT00390000000410.lb #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27
Emydidae	ANCESTRAL SPECIES	35	ENSGT00960000187104	ENSGT00940000155153.C.b	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000162942.h.b.a.a	ENSGT01100000263519.E.b.b.a.a.a.a.b.a	ENSGT01080000257839.b	ENSGT01030000235175.b.a.b	ENSGT01100000263520.a.a.a.a.b.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT01030000234856	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.kb.a.a #16	ENSGT00390000000410.lb #16	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573
Three-toed box turtle	MODERN SPECIES	48	ENSTMTG00000019510	ENSTMTG00000019518	ENSTMTG00000019523	ENSTMTG00000019536	ENSTMTG00000019554	ENSTMTG00000019560	ENSTMTG00000019571	ENSTMTG00000019582	ENSTMTG00000019588	ENSTMTG00000019597	CDC25A (ENSTMTG00000019609) #17	ENSTMTG00000019656	DHX30 (ENSTMTG00000019720) #19	ENSTMTG00000019752	SMARCC1 (ENSTMTG00000019774) #20	ELP6 (ENSTMTG00000019829) #22	SCAP (ENSTMTG00000019851) #23	PTPN23 (ENSTMTG00000019891) #24	ENSTMTG00000019917	MYO1G (ENSTMTG00000019936)	ENSTMTG00000020150	CCM2 (ENSTMTG00000020166)	ENSTMTG00000020175	TBRG4 (ENSTMTG00000020183)	ENSTMTG00000007242	ENSTMTG00000007252 #16	ENSTMTG00000007259	KLHL18 (ENSTMTG00000007268) #25	SETD2 (ENSTMTG00000007286) #27	ENSTMTG00000007371	NBEAL2 (ENSTMTG00000007411) #28
painted turtle	MODERN SPECIES	837	ENSCPBG00000015179	ENSCPBG00000015183	ENSCPBG00000015192	ENSCPBG00000015195	ENSCPBG00000015197	ENSCPBG00000015201	ENSCPBG00000015203	ENSCPBG00000015207	CDC25A (ENSCPBG00000015210) #17	ENSCPBG00000015215	ENSCPBG00000015219	DHX30 (ENSCPBG00000015231) #19	ENSCPBG00000015241	SMARCC1 (ENSCPBG00000015258) #20	CSPG5 (ENSCPBG00000015265) #21	ELP6 (ENSCPBG00000015270) #22	SCAP (ENSCPBG00000015282) #23	ENSCPBG00000015293	PTPN23 (ENSCPBG00000015296) #24	ENSCPBG00000015303	MYO1G (ENSCPBG00000015309)	ENSCPBG00000015321	CCM2 (ENSCPBG00000015334)	ENSCPBG00000015341	TBRG4 (ENSCPBG00000015345)	ENSCPBG00000015357 #16	ENSCPBG00000015359 #16	ENSCPBG00000015361 #16	ENSCPBG00000015364	ENSCPBG00000015365	KLHL18 (ENSCPBG00000015366) #25
Testudinidae	ANCESTRAL SPECIES	1			ENSGT01100000263521.a.b.a.a.c.a.a.a.a	ENSGT00940000162942.h.b.b	ENSGT00940000155153.A.b	ENSGT00960000189325	ENSGT00940000161603	ENSGT01100000263519.A.b.a.b.a.a	ENSGT01030000234669.M.b.a.b.b	ENSGT00940000160737 #17	ENSGT00940000159742.i.b	ENSGT00940000159742.j	ENSGT00940000158279 #19	ENSGT00940000156347 #20	ENSGT00440000034270 #21	ENSGT00390000011734 #22	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.kb.a.a #16	ENSGT01100000264012	ENSGT00950000185398	ENSGT00940000157026 #25	ENSGT00940000158533 #26	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00940000158454 #28
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005002600	ENSGEVG00005002610	ENSGEVG00005002620	ENSGEVG00005002628	ENSGEVG00005002638	ENSGEVG00005002645	ENSGEVG00005002654	CDC25A (ENSGEVG00005002669) #17	ENSGEVG00005002699	ENSGEVG00005002721	DHX30 (ENSGEVG00005002857) #19	ENSGEVG00005003056	SMARCC1 (ENSGEVG00005008843) #20	ENSGEVG00005008900	CSPG5 (ENSGEVG00005008931) #21	ELP6 (ENSGEVG00005008986) #22	SCAP (ENSGEVG00005009022) #23	PTPN23 (ENSGEVG00005009165) #24	ENSGEVG00005009327	MYO1G (ENSGEVG00005009440)	CCM2 (ENSGEVG00005009758)	ENSGEVG00005009844	TBRG4 (ENSGEVG00005009887)	ENSGEVG00005009964 #16	ENSGEVG00005010031	ENSGEVG00005010072	ENSGEVG00005010105	ENSGEVG00005010150	ENSGEVG00005010181	KLHL18 (ENSGEVG00005010243) #25	KIF9 (ENSGEVG00005010334) #26
Abingdon island giant tortoise	MODERN SPECIES	451												ENSCABG00000002181	ENSCABG00000002180	ICA1 (ENSCABG00000002177)	NXPH1 (ENSCABG00000002174)	ELP6 (ENSCABG00000002172) #22	SCAP (ENSCABG00000002169) #23
Chinese turtle	MODERN SPECIES	1397									ENSPSIG00000000054	ENSPSIG00000007912	CDC25A (ENSPSIG00000008005) #17	ENSPSIG00000011193	DHX30 (ENSPSIG00000011740) #19	SMARCC1 (ENSPSIG00000011793) #20	ENSPSIG00000011838 #21	ELP6 (ENSPSIG00000011988) #22	SCAP (ENSPSIG00000012075) #23	ENSPSIG00000000056
Anura	ANCESTRAL SPECIES	192														ENSGT00940000158279 #19	ENSGT00940000159742	ENSGT00390000011734 #22	ENSGT01030000234856	ENSGT00940000158130 #23	ENSGT00940000157687 #24	ENSGT00390000008812.b.a	ENSGT00390000000938	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000003964.b	ENSGT00940000166800	ENSGT00940000160086 #27	ENSGT00940000165573	ENSGT00940000158454 #28	ENSGT00390000011619 #29
Frog	MODERN SPECIES	6	acaa1 (ENSXETG00000018446)	map3k22 (ENSXETG00000018442)	cry-dash (ENSXETG00000040646)	myd88 (ENSXETG00000018434)	gal3st4.3 (ENSXETG00000014499)	slc22a13 (ENSXETG00000014497)	ENSXETG00000044782	ENSXETG00000032104	smarcc1 (ENSXETG00000014492) #20	ENSXETG00000047526	ENSXETG00000044203	ENSXETG00000047431	cspg5 (ENSXETG00000039472) #21	ndufb10 (ENSXETG00000020351)	bcas2 (ENSXETG00000044049)	elp6 (ENSXETG00000013936) #22	scap (ENSXETG00000020354) #23	ptpn23 (ENSXETG00000020359) #24	ENSXETG00000049029	ENSXETG00000044043	ENSXETG00000044586	ENSXETG00000039440	ENSXETG00000044735	znf852 (ENSXETG00000037850)	znf250 (ENSXETG00000045242)	ENSXETG00000022581	znf665l (ENSXETG00000045685)	tsnare1l (ENSXETG00000002869)	ENSXETG00000023928	ENSXETG00000047448	XB22065601 [provisional] (ENSXETG00000041425)
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000013639	ENSLLEG00000013576	ENSLLEG00000013514	ENSLLEG00000013459	ENSLLEG00000013402	ENSLLEG00000013365	ENSLLEG00000013340	ENSLLEG00000013242	DHX30 (ENSLLEG00000013142) #19	ENSLLEG00000013110	ENSLLEG00000013090	ENSLLEG00000013075	ENSLLEG00000013050	ENSLLEG00000013034	ENSLLEG00000013026	ENSLLEG00000012915 #22	ENSLLEG00000012864	SCAP (ENSLLEG00000012425) #23	ENSLLEG00000012347	PTPN23 (ENSLLEG00000011896) #24	ENSLLEG00000011850	ANAPC15 (ENSLLEG00000011820)	CCM2 (ENSLLEG00000011070)	ENSLLEG00000010927	ENSLLEG00000010891	TBRG4 (ENSLLEG00000010779)	ENSLLEG00000010366	ENSLLEG00000010105	SETD2 (ENSLLEG00000009543) #27	ENSLLEG00000009279	ENSLLEG00000009230
Coelacanth	MODERN SPECIES	2556																ELP6 (ENSLACG00000006678) #22	SCAP (ENSLACG00000003155) #23	PTPN23 (ENSLACG00000000512) #24