Euteleostomi	ANCESTRAL SPECIES	389									ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00970000198411	ENSGT00940000164225	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000156404
Sarcopterygii	ANCESTRAL SPECIES	145	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000168201.a	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00970000198411	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000164225	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000156404
Tetrapoda	ANCESTRAL SPECIES	6	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00970000198411	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b	ENSGT00390000006350	ENSGT00390000005727.b
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b #27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT01030000235401
Mammalia	ANCESTRAL SPECIES	6	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Theria	ANCESTRAL SPECIES	5	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Eutheria	ANCESTRAL SPECIES	10	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Primates	ANCESTRAL SPECIES	13	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00880000138031.j ##14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36	ENSGT00390000008096.B #37
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36	ENSGT00390000008096.B #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36	ENSGT00390000008096.B #37
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36	ENSGT00390000008096.B #37
Pan	ANCESTRAL SPECIES	12	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36	ENSGT00390000008096.B #37
Bonobo	MODERN SPECIES	15	FZD7 (ENSPPAG00000030490) #7	CDK15 (ENSPPAG00000027737) #8	ALS2 (ENSPPAG00000039038) #9	MPP4 (ENSPPAG00000035730) #10	TMEM237 (ENSPPAG00000030371) #11	ENSPPAG00000042646 #12	STRADB (ENSPPAG00000030005) #13	ENSPPAG00000032863 #14	TRAK2 (ENSPPAG00000035936) #15	FLACC1 (ENSPPAG00000012440) #16	CASP8 (ENSPPAG00000030711) #17	CASP10 (ENSPPAG00000042370) #18	CFLAR (ENSPPAG00000027058) #19	NDUFB3 (ENSPPAG00000040881) #20	HYCC2 (ENSPPAG00000040686) #21	ORC2 (ENSPPAG00000030211) #22	NIF3L1 (ENSPPAG00000043491) #23	PPIL3 (ENSPPAG00000039183) #24	CLK1 (ENSPPAG00000036957) #25	BZW1 (ENSPPAG00000027971) #26	ENSPPAG00000030893 #27	AOX1 (ENSPPAG00000000241) #28	SGO2 (ENSPPAG00000000061) #29	KCTD18 (ENSPPAG00000038865) #30	SPATS2L (ENSPPAG00000036160) #31	MAIP1 (ENSPPAG00000026692) #32	TYW5 (ENSPPAG00000027150) #33	C2orf69 (ENSPPAG00000035529) #34	FTCDNL1 (ENSPPAG00000020283) #35	ENSPPAG00000039843 #36	SATB2 (ENSPPAG00000044026) #37
Chimpanzee	MODERN SPECIES	15	CDK15 (ENSPTRG00000012812) #8	ALS2 (ENSPTRG00000012811) #9	MPP4 (ENSPTRG00000012809) #10	TMEM237 (ENSPTRG00000012808) #11	C2CD6 (ENSPTRG00000012807) #12	STRADB (ENSPTRG00000050289) #13	ENSPTRG00000051730 #14	TRAK2 (ENSPTRG00000012804) #15	FLACC1 (ENSPTRG00000012803) #16	CASP8 (ENSPTRG00000012801) #17	CASP10 (ENSPTRG00000012800) #18	CFLAR (ENSPTRG00000012798) #19	NDUFB3 (ENSPTRG00000012797) #20	ENSPTRG00000032634	HYCC2 (ENSPTRG00000012796) #21	ORC2 (ENSPTRG00000012795) #22	NIF3L1 (ENSPTRG00000012794) #23	PPIL3 (ENSPTRG00000012793) #24	CLK1 (ENSPTRG00000012792) #25	BZW1 (ENSPTRG00000012791) #26	ENSPTRG00000044647 #27	AOX1 (ENSPTRG00000012790) #28	SGO2 (ENSPTRG00000022953) #29	KCTD18 (ENSPTRG00000012787) #30	SPATS2L (ENSPTRG00000012785) #31	MAIP1 (ENSPTRG00000012784) #32	TYW5 (ENSPTRG00000012783) #33	C2orf69 (ENSPTRG00000012782) #34	FTCDNL1 (ENSPTRG00000047502) #35	ENSPTRG00000050460 #36	SATB2 (ENSPTRG00000012779) #37
Human	MODERN SPECIES	11	KIAA2012 (ENSG00000182329)	FZD7 (ENSG00000155760) #7	CDK15 (ENSG00000138395) #8	ALS2 (ENSG00000003393) #9	MPP4 (ENSG00000082126) #10	TMEM237 (ENSG00000155755) #11	C2CD6 (ENSG00000155754) #12	STRADB (ENSG00000082146) #13	TRAK2 (ENSG00000115993) #15	FLACC1 (ENSG00000155749) #16	CASP8 (ENSG00000064012) #17	CASP10 (ENSG00000003400) #18	CFLAR (ENSG00000003402) #19	NDUFB3 (ENSG00000119013) #20	HYCC2 (ENSG00000155744) #21	ORC2 (ENSG00000115942) #22	NIF3L1 (ENSG00000196290) #23	PPIL3 (ENSG00000240344) #24	CLK1 (ENSG00000013441) #25	BZW1 (ENSG00000082153) #26	AOX1 (ENSG00000138356) #28	SGO2 (ENSG00000163535) #29	KCTD18 (ENSG00000155729) #30	SPATS2L (ENSG00000196141) #31	MAIP1 (ENSG00000162972) #32	TYW5 (ENSG00000162971) #33	C2orf69 (ENSG00000178074) #34	FTCDNL1 (ENSG00000226124) #35	SATB2 (ENSG00000119042) #37	PLCL1 (ENSG00000115896)	BOLL (ENSG00000152430)
Gorilla	MODERN SPECIES	15	ALS2 (ENSGGOG00000015032) #9	MPP4 (ENSGGOG00000015025) #10	TMEM237 (ENSGGOG00000004720) #11	C2CD6 (ENSGGOG00000012199) #12	STRADB (ENSGGOG00000012183) #13	ENSGGOG00000040945 #14	TRAK2 (ENSGGOG00000003014) #15	FLACC1 (ENSGGOG00000000211) #16	CASP8 (ENSGGOG00000000209) #17	CASP10 (ENSGGOG00000012288) #18	ENSGGOG00000042670	CFLAR (ENSGGOG00000010972) #19	NDUFB3 (ENSGGOG00000023537) #20	ENSGGOG00000022797	HYCC2 (ENSGGOG00000039554) #21	ORC2 (ENSGGOG00000014070) #22	NIF3L1 (ENSGGOG00000014060) #23	PPIL3 (ENSGGOG00000022268) #24	CLK1 (ENSGGOG00000016192) #25	BZW1 (ENSGGOG00000016296) #26	AOX1 (ENSGGOG00000006140) #28	SGO2 (ENSGGOG00000038921) #29	KCTD18 (ENSGGOG00000014079) #30	SPATS2L (ENSGGOG00000005917) #31	MAIP1 (ENSGGOG00000005661) #32	TYW5 (ENSGGOG00000041719) #33	C2orf69 (ENSGGOG00000005649) #34	FTCDNL1 (ENSGGOG00000040488) #35	ENSGGOG00000044011 #36	SATB2 (ENSGGOG00000014123) #37	PLCL1 (ENSGGOG00000001959)
Orangutan	MODERN SPECIES	15	FZD7 (ENSPPYG00000013080) #7	CDK15 (ENSPPYG00000013079) #8	ALS2 (ENSPPYG00000013078) #9	MPP4 (ENSPPYG00000013077) #10	TMEM237 (ENSPPYG00000013076) #11	ENSPPYG00000037718	C2CD6 (ENSPPYG00000013075) #12	STRADB (ENSPPYG00000013074) #13	TRAK2 (ENSPPYG00000013073) #15	FLACC1 (ENSPPYG00000013072) #16	CASP8 (ENSPPYG00000013071) #17	CASP10 (ENSPPYG00000013070) #18	CFLAR (ENSPPYG00000013068) #19	NDUFB3 (ENSPPYG00000013065) #20	HYCC2 (ENSPPYG00000029836) #21	ORC2 (ENSPPYG00000013064) #22	NIF3L1 (ENSPPYG00000013063) #23	ENSPPYG00000013062	CLK1 (ENSPPYG00000013061) #25	BZW1 (ENSPPYG00000035986) #26	AOX1 (ENSPPYG00000013058) #28	SGO2 (ENSPPYG00000013057) #29	KCTD18 (ENSPPYG00000030650) #30	SPATS2L (ENSPPYG00000013055) #31	MAIP1 (ENSPPYG00000035692) #32	TYW5 (ENSPPYG00000033416) #33	C2orf69 (ENSPPYG00000013054) #34	FTCDNL1 (ENSPPYG00000033061) #35	SATB2 (ENSPPYG00000013052) #37	PLCL1 (ENSPPYG00000039108)	BOLL (ENSPPYG00000037688)
Gibbon	MODERN SPECIES	14	ALS2 (ENSNLEG00000006980) #9	MPP4 (ENSNLEG00000006977) #10	TMEM237 (ENSNLEG00000006974) #11	ENSNLEG00000006972 #12	ENSNLEG00000034127 #12	STRADB (ENSNLEG00000006967) #13	ENSNLEG00000033546 ##14	TRAK2 (ENSNLEG00000006960) #15	FLACC1 (ENSNLEG00000006956) #16	CASP8 (ENSNLEG00000032856) #17	CASP10 (ENSNLEG00000006951) #18	ENSNLEG00000030686	CFLAR (ENSNLEG00000006947) #19	NDUFB3 (ENSNLEG00000006946) #20	HYCC2 (ENSNLEG00000006941) #21	ORC2 (ENSNLEG00000006938) #22	NIF3L1 (ENSNLEG00000006935) #23	PPIL3 (ENSNLEG00000034236) #24	CLK1 (ENSNLEG00000032526) #25	BZW1 (ENSNLEG00000006929) #26	ENSNLEG00000029066 #27	AOX1 (ENSNLEG00000006920) #28	SGO2 (ENSNLEG00000006913) #29	KCTD18 (ENSNLEG00000006912) #30	SPATS2L (ENSNLEG00000006905) #31	MAIP1 (ENSNLEG00000029234) #32	TYW5 (ENSNLEG00000031551) #33	C2orf69 (ENSNLEG00000031645) #34	FTCDNL1 (ENSNLEG00000029410) #35	SATB2 (ENSNLEG00000006893) #37	PLCL1 (ENSNLEG00000006890)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Vervet Monkey	MODERN SPECIES	1	FZD7 (ENSCSAG00000018768) #7	CDK15 (ENSCSAG00000010541) #8	ENSCSAG00000010553 #9	ENSCSAG00000010567 #9	MPP4 (ENSCSAG00000010593) #10	TMEM237 (ENSCSAG00000010640) #11	C2CD6 (ENSCSAG00000010715) #12	STRADB (ENSCSAG00000010744) #13	TRAK2 (ENSCSAG00000010758) #15	FLACC1 (ENSCSAG00000010769) #16	CASP8 (ENSCSAG00000010781) #17	CASP10 (ENSCSAG00000010787) #18	CFLAR (ENSCSAG00000010798) #19	NDUFB3 (ENSCSAG00000010804) #20	HYCC2 (ENSCSAG00000010815) #21	ORC2 (ENSCSAG00000010834) #22	NIF3L1 (ENSCSAG00000010842) #23	PPIL3 (ENSCSAG00000010852) #24	CLK1 (ENSCSAG00000010924) #25	BZW1 (ENSCSAG00000010957) #26	ENSCSAG00000011187 #27	AOX1 (ENSCSAG00000011276) #28	SGO2 (ENSCSAG00000011303) #29	KCTD18 (ENSCSAG00000011318) #30	SPATS2L (ENSCSAG00000011326) #31	MAIP1 (ENSCSAG00000011334) #32	TYW5 (ENSCSAG00000011351) #33	C2orf69 (ENSCSAG00000011358) #34	FTCDNL1 (ENSCSAG00000011372) #35	SATB2 (ENSCSAG00000011380) #37	PLCL1 (ENSCSAG00000011391)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00910000146883.C	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00910000146883.C	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000000950.c.b.d.b #36
Pig-tailed macaque	MODERN SPECIES	409	ALS2 (ENSMNEG00000032184) #9	MPP4 (ENSMNEG00000033893) #10	TMEM237 (ENSMNEG00000029387) #11	C2CD6 (ENSMNEG00000028303) #12	STRADB (ENSMNEG00000030956) #13	TRAK2 (ENSMNEG00000036459) #15	FLACC1 (ENSMNEG00000030040) #16	CASP8 (ENSMNEG00000039649) #17	ENSMNEG00000040361	CASP10 (ENSMNEG00000036720) #18	CFLAR (ENSMNEG00000043615) #19	ENSMNEG00000032011	ENSMNEG00000029934 #20	HYCC2 (ENSMNEG00000032637) #21	ENSMNEG00000024082	ORC2 (ENSMNEG00000030603) #22	NIF3L1 (ENSMNEG00000040987) #23	PPIL3 (ENSMNEG00000032202) #24	CLK1 (ENSMNEG00000031266) #25	BZW1 (ENSMNEG00000043638) #26	ENSMNEG00000045434 #27	ENSMNEG00000034841 ##27	AOX1 (ENSMNEG00000024714) #28	SGO2 (ENSMNEG00000035682) #29	KCTD18 (ENSMNEG00000038609) #30	SPATS2L (ENSMNEG00000016309) #31	MAIP1 (ENSMNEG00000028494) #32	TYW5 (ENSMNEG00000030303) #33	C2orf69 (ENSMNEG00000035266) #34	FTCDNL1 (ENSMNEG00000037918) #35	ENSMNEG00000040066 #36
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Crab-eating macaque	MODERN SPECIES	3	CDK15 (ENSMFAG00000002188) #8	ALS2 (ENSMFAG00000039968) #9	MPP4 (ENSMFAG00000038003) #10	TMEM237 (ENSMFAG00000039637) #11	C2CD6 (ENSMFAG00000037284) #12	STRADB (ENSMFAG00000040280) #13	TRAK2 (ENSMFAG00000046205) #15	FLACC1 (ENSMFAG00000003322) #16	CASP8 (ENSMFAG00000034568) #17	CASP10 (ENSMFAG00000031741) #18	ENSMFAG00000061517	ENSMFAG00000060351	CFLAR (ENSMFAG00000042284) #19	NDUFB3 (ENSMFAG00000030964) #20	HYCC2 (ENSMFAG00000032144) #21	ORC2 (ENSMFAG00000040620) #22	NIF3L1 (ENSMFAG00000003012) #23	PPIL3 (ENSMFAG00000038708) #24	CLK1 (ENSMFAG00000030719) #25	BZW1 (ENSMFAG00000020809) #26	ENSMFAG00000034555 #27	AOX1 (ENSMFAG00000036889) #28	SGO2 (ENSMFAG00000041855) #29	KCTD18 (ENSMFAG00000037300) #30	SPATS2L (ENSMFAG00000003450) #31	MAIP1 (ENSMFAG00000045074) #32	TYW5 (ENSMFAG00000004016) #33	C2orf69 (ENSMFAG00000032268) #34	ENSMFAG00000038094 #35	SATB2 (ENSMFAG00000035983) #37	PLCL1 (ENSMFAG00000038838)
Rhesus	MODERN SPECIES	3	KIAA2012 (ENSMMUG00000001883)	FZD7 (ENSMMUG00000045285) #7	CDK15 (ENSMMUG00000014321) #8	ALS2 (ENSMMUG00000018155) #9	MPP4 (ENSMMUG00000018151) #10	TMEM237 (ENSMMUG00000018147) #11	C2CD6 (ENSMMUG00000018144) #12	STRADB (ENSMMUG00000018141) #13	TRAK2 (ENSMMUG00000023812) #15	FLACC1 (ENSMMUG00000018356) #16	CASP8 (ENSMMUG00000031296) #17	CASP10 (ENSMMUG00000031297) #18	CFLAR (ENSMMUG00000012310) #19	NDUFB3 (ENSMMUG00000060044) #20	HYCC2 (ENSMMUG00000012224) #21	ORC2 (ENSMMUG00000014460) #22	NIF3L1 (ENSMMUG00000006639) #23	PPIL3 (ENSMMUG00000006638)	CLK1 (ENSMMUG00000006640) #25	BZW1 (ENSMMUG00000022202) #26	AOX2 (ENSMMUG00000005835) #27	AOX4 (ENSMMUG00000047974) ##27	AOX1 (ENSMMUG00000021931) #28	SGO2 (ENSMMUG00000052913) #29	KCTD18 (ENSMMUG00000008102) #30	SPATS2L (ENSMMUG00000008101) #31	MAIP1 (ENSMMUG00000023168) #32	TYW5 (ENSMMUG00000023167) #33	C12H2orf69 (ENSMMUG00000041535) #34	FTCDNL1 (ENSMMUG00000031310) #35	SATB2 (ENSMMUG00000046254) #37
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00910000146883.C	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Olive baboon	MODERN SPECIES	1	FZD7 (ENSPANG00000010400) #7	CDK15 (ENSPANG00000011570) #8	ALS2 (ENSPANG00000022091) #9	MPP4 (ENSPANG00000006047) #10	TMEM237 (ENSPANG00000008517) #11	C2CD6 (ENSPANG00000004588) #12	STRADB (ENSPANG00000009089) #13	TRAK2 (ENSPANG00000006048) #15	FLACC1 (ENSPANG00000015084) #16	CASP8 (ENSPANG00000012882) #17	ENSPANG00000042566	CASP10 (ENSPANG00000018306) #18	CFLAR (ENSPANG00000009268) #19	NDUFB3 (ENSPANG00000030814) #20	HYCC2 (ENSPANG00000023886) #21	ORC2 (ENSPANG00000034347) #22	NIF3L1 (ENSPANG00000025493) #23	ENSPANG00000009683	CLK1 (ENSPANG00000015580) #25	BZW1 (ENSPANG00000016459) #26	AOX2 (ENSPANG00000016460) #27	AOX4 (ENSPANG00000024540) ##27	AOX1 (ENSPANG00000015933) #28	SGO2 (ENSPANG00000021922) #29	KCTD18 (ENSPANG00000021439) #30	SPATS2L (ENSPANG00000008482) #31	TYW5 (ENSPANG00000009235) #33	C2orf69 (ENSPANG00000040521) #34	ENSPANG00000044612 #35	ENSPANG00000031615 #35	SATB2 (ENSPANG00000011212) #37
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00910000146883.C	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Sooty mangabey	MODERN SPECIES	570	ALS2 (ENSCATG00000033668) #9	MPP4 (ENSCATG00000035366) #10	TMEM237 (ENSCATG00000032238) #11	C2CD6 (ENSCATG00000031983) #12	STRADB (ENSCATG00000031887) #13	TRAK2 (ENSCATG00000035925) #15	FLACC1 (ENSCATG00000031292) #16	ENSCATG00000033219	CASP8 (ENSCATG00000036996) #17	ENSCATG00000032008 #18	ENSCATG00000030927	CFLAR (ENSCATG00000031715) #19	NDUFB3 (ENSCATG00000035455) #20	HYCC2 (ENSCATG00000027074) #21	ENSCATG00000002724	ORC2 (ENSCATG00000017612) #22	NIF3L1 (ENSCATG00000030966) #23	PPIL3 (ENSCATG00000031187) #24	CLK1 (ENSCATG00000030802) #25	BZW1 (ENSCATG00000032512) #26	ENSCATG00000019918 #27	ENSCATG00000042053 ##27	AOX1 (ENSCATG00000033826) #28	SGO2 (ENSCATG00000027226) #29	KCTD18 (ENSCATG00000044706) #30	SPATS2L (ENSCATG00000008807) #31	MAIP1 (ENSCATG00000036858) #32	TYW5 (ENSCATG00000033078) #33	C2orf69 (ENSCATG00000031233) #34	FTCDNL1 (ENSCATG00000018934) #35	ENSCATG00000044312 #36
Drill	MODERN SPECIES	457	ALS2 (ENSMLEG00000042400) #9	MPP4 (ENSMLEG00000013857) #10	TMEM237 (ENSMLEG00000041782) #11	C2CD6 (ENSMLEG00000043681) #12	STRADB (ENSMLEG00000034988) #13	TRAK2 (ENSMLEG00000032765) #15	FLACC1 (ENSMLEG00000034476) #16	CASP8 (ENSMLEG00000032037) #17	ENSMLEG00000039409	CASP10 (ENSMLEG00000035963) #18	CFLAR (ENSMLEG00000029692) #19	ENSMLEG00000039976	NDUFB3 (ENSMLEG00000022709) #20	HYCC2 (ENSMLEG00000036064) #21	ENSMLEG00000027789	ORC2 (ENSMLEG00000040373) #22	NIF3L1 (ENSMLEG00000042352) #23	PPIL3 (ENSMLEG00000039054) #24	CLK1 (ENSMLEG00000029735) #25	BZW1 (ENSMLEG00000018894) #26	ENSMLEG00000016360 #27	ENSMLEG00000013006 ##27	AOX1 (ENSMLEG00000039204) #28	SGO2 (ENSMLEG00000039520) #29	KCTD18 (ENSMLEG00000042319) #30	SPATS2L (ENSMLEG00000037145) #31	ENSMLEG00000036074	MAIP1 (ENSMLEG00000041626) #32	TYW5 (ENSMLEG00000038351) #33	C2orf69 (ENSMLEG00000015699) #34	FTCDNL1 (ENSMLEG00000042066) #35
Rhinopithecus	ANCESTRAL SPECIES	83	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.a #13	ENSGT00880000138031.i #14	ENSGT00940000158202 #15	ENSGT00910000147335	ENSGT00390000002219.e	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00950000183743	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Golden snub-nosed monkey	MODERN SPECIES	676																ORC2 (ENSRROG00000027053) #22	NIF3L1 (ENSRROG00000042255) #23	ENSRROG00000029517	CLK1 (ENSRROG00000035273) #25	BZW1 (ENSRROG00000044305) #26	ENSRROG00000043595 #27	ENSRROG00000034026 ##27	AOX1 (ENSRROG00000043118) #28	SGO2 (ENSRROG00000037302) #29	KCTD18 (ENSRROG00000043788) #30	SPATS2L (ENSRROG00000041208) #31	ENSRROG00000043858	ENSRROG00000040812 #32	TYW5 (ENSRROG00000033012) #33	C2orf69 (ENSRROG00000028208) #34	FTCDNL1 (ENSRROG00000042811) #35
Black snub-nosed monkey	MODERN SPECIES	71	ENSRBIG00000034741	TRAK2 (ENSRBIG00000027774) #15	ENSRBIG00000041242 ##14	ENSRBIG00000016044	ENSRBIG00000041736	ENSRBIG00000021678	ENSRBIG00000029069	FLACC1 (ENSRBIG00000033862) #16	ENSRBIG00000011046	CASP8 (ENSRBIG00000044586) #17	ENSRBIG00000038761	CASP10 (ENSRBIG00000034022) #18	CFLAR (ENSRBIG00000028528) #19	NDUFB3 (ENSRBIG00000022999) #20	HYCC2 (ENSRBIG00000031079) #21	ORC2 (ENSRBIG00000033127) #22	NIF3L1 (ENSRBIG00000024376) #23	ENSRBIG00000038949	CLK1 (ENSRBIG00000038806) #25	BZW1 (ENSRBIG00000031336) #26	ENSRBIG00000028461 #27	ENSRBIG00000034700 ##27	AOX1 (ENSRBIG00000039624) #28	SGO2 (ENSRBIG00000031954) #29	KCTD18 (ENSRBIG00000010094) #30	SPATS2L (ENSRBIG00000002251) #31	ENSRBIG00000008609
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00880000138031.j ##14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234.c #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00880000138031.j ##14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234.c #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00880000138031.j ##14	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00390000007552.f.w.b	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.j.a #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234.c #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Capuchin	MODERN SPECIES	178						C2CD6 (ENSCCAG00000028522) #12	STRADB (ENSCCAG00000020333) #13	TRAK2 (ENSCCAG00000020610) #15	FLACC1 (ENSCCAG00000026901) #16	ENSCCAG00000018015	CASP8 (ENSCCAG00000028402) #17	CASP10 (ENSCCAG00000024459) #18	CFLAR (ENSCCAG00000033389) #19	NDUFB3 (ENSCCAG00000033888) #20	FAM126B (ENSCCAG00000029565) #21	ORC2 (ENSCCAG00000000270) #22	NIF3L1 (ENSCCAG00000020100) #23	PPIL3 (ENSCCAG00000019393) #24	CLK1 (ENSCCAG00000021387) #25	BZW1 (ENSCCAG00000012616) #26	ENSCCAG00000028426 #27	AOX1 (ENSCCAG00000025414) #28	SGO2 (ENSCCAG00000032369) #29	KCTD18 (ENSCCAG00000023011) #30	SPATS2L (ENSCCAG00000033886) #31	MAIP1 (ENSCCAG00000012313) #32	TYW5 (ENSCCAG00000030363) #33	C2orf69 (ENSCCAG00000025235) #34	ENSCCAG00000027889 #35	SATB2 (ENSCCAG00000028159) #37	PLCL1 (ENSCCAG00000008545)
Bolivian squirrel monkey	MODERN SPECIES	56	ALS2 (ENSSBOG00000026070) #9	MPP4 (ENSSBOG00000032446) #10	TMEM237 (ENSSBOG00000028677) #11	C2CD6 (ENSSBOG00000024027) #12	ENSSBOG00000022018	STRADB (ENSSBOG00000028914) #13	TRAK2 (ENSSBOG00000027410) #15	ENSSBOG00000024387 ##14	FLACC1 (ENSSBOG00000032227) #16	CASP8 (ENSSBOG00000027346) #17	ENSSBOG00000021837	CASP10 (ENSSBOG00000023212) #18	CFLAR (ENSSBOG00000020876) #19	NDUFB3 (ENSSBOG00000023814) #20	HYCC2 (ENSSBOG00000033197) #21	ENSSBOG00000025751 #22	NIF3L1 (ENSSBOG00000034561) #23	ENSSBOG00000028593	CLK1 (ENSSBOG00000031614) #25	BZW1 (ENSSBOG00000020710) #26	ENSSBOG00000034034 #27	AOX1 (ENSSBOG00000032424) #28	SGO2 (ENSSBOG00000035222) #29	KCTD18 (ENSSBOG00000031520) #30	SPATS2L (ENSSBOG00000031853) #31	MAIP1 (ENSSBOG00000033061) #32	TYW5 (ENSSBOG00000020625) #33	C2orf69 (ENSSBOG00000031239) #34	FTCDNL1 (ENSSBOG00000021980) #35	SATB2 (ENSSBOG00000028702) #37	ENSSBOG00000007950
Marmoset	MODERN SPECIES	18	ENSCJAG00000047154	KIAA2012 (ENSCJAG00000004923)	FZD7 (ENSCJAG00000038346) #7	CDK15 (ENSCJAG00000004892) #8	ALS2 (ENSCJAG00000004769) #9	MPP4 (ENSCJAG00000004750) #10	TMEM237 (ENSCJAG00000004720) #11	C2CD6 (ENSCJAG00000004698) #12	STRADB (ENSCJAG00000004661) #13	TRAK2 (ENSCJAG00000004568) #15	FLACC1 (ENSCJAG00000004558) #16	CASP8 (ENSCJAG00000004551) #17	CASP10 (ENSCJAG00000004540) #18	ENSCJAG00000004505 #19	NDUFB3 (ENSCJAG00000004496) #20	ORC2 (ENSCJAG00000004465) #22	NIF3L1 (ENSCJAG00000004400) #23	PPIL3 (ENSCJAG00000041811) #24	CLK1 (ENSCJAG00000004319) #25	BZW1 (ENSCJAG00000004267) #26	ENSCJAG00000033419 #27	AOX1 (ENSCJAG00000004230) #28	SGO2 (ENSCJAG00000004216) #29	KCTD18 (ENSCJAG00000031173) #30	ENSCJAG00000085721	SPATS2L (ENSCJAG00000004173) #31	ENSCJAG00000083755	MAIP1 (ENSCJAG00000037075) #32	TYW5 (ENSCJAG00000004155) #33	C2orf69 (ENSCJAG00000004149) #34	ENSCJAG00000044172 #35
Mas night monkey	MODERN SPECIES	357	ALS2 (ENSANAG00000037290) #9	MPP4 (ENSANAG00000033861) #10	TMEM237 (ENSANAG00000019897) #11	ENSANAG00000024913 #12	STRADB (ENSANAG00000027419) #13	TRAK2 (ENSANAG00000026933) #15	ENSANAG00000020277 ##14	ENSANAG00000020470	FLACC1 (ENSANAG00000028497) #16	ENSANAG00000021926	CASP8 (ENSANAG00000028822) #17	CASP10 (ENSANAG00000018072) #18	CFLAR (ENSANAG00000024537) #19	ENSANAG00000022594 #20	ENSANAG00000022986 #21	ORC2 (ENSANAG00000029403) #22	NIF3L1 (ENSANAG00000026731) #23
Tarsier	MODERN SPECIES	6693							ENSTSYG00000027589 #12	STRADB (ENSTSYG00000014648) #13	TRAK2 (ENSTSYG00000008323) #15	FLACC1 (ENSTSYG00000012640) #16	CASP8 (ENSTSYG00000025421) #17	CASP10 (ENSTSYG00000011032) #18	ENSTSYG00000029188 #19	NDUFB3 (ENSTSYG00000025934) #20	FAM126B (ENSTSYG00000030128) #21	ORC2 (ENSTSYG00000010437) #22	NIF3L1 (ENSTSYG00000009141) #23	PPIL3 (ENSTSYG00000031941) #24	CLK1 (ENSTSYG00000008504) #25	BZW1 (ENSTSYG00000013638) #26
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Mouse lemur	MODERN SPECIES	30	ALS2 (ENSMICG00000013399) #9	MPP4 (ENSMICG00000013369) #10	TMEM237 (ENSMICG00000013335) #11	C2CD6 (ENSMICG00000034413) #12	ENSMICG00000032723	STRADB (ENSMICG00000013292) #13	ENSMICG00000013250 #15	ENSMICG00000033274	FLACC1 (ENSMICG00000004479) #16	CASP8 (ENSMICG00000004468) #17	CASP10 (ENSMICG00000047692) #18	CFLAR (ENSMICG00000004452) #19	NDUFB3 (ENSMICG00000047803) #20	HYCC2 (ENSMICG00000008160) #21	ENSMICG00000045034	ORC2 (ENSMICG00000043343) #22	ENSMICG00000003372 #23	PPIL3 (ENSMICG00000003367) #24	CLK1 (ENSMICG00000003361) #25	BZW1 (ENSMICG00000003355) #26	ENSMICG00000033651 #27	ENSMICG00000027664 ##27	AOX1 (ENSMICG00000005718) #28	SGO2 (ENSMICG00000033463) #29	ENSMICG00000003963 #30	SPATS2L (ENSMICG00000003956) #31	MAIP1 (ENSMICG00000044985) #32	TYW5 (ENSMICG00000046098) #33	C2orf69 (ENSMICG00000035511) #34	ENSMICG00000026608 #35	ENSMICG00000037134
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Greater bamboo lemur	MODERN SPECIES	1209	FZD7 (ENSPSMG00000019204) #7	CDK15 (ENSPSMG00000019177) #8	ALS2 (ENSPSMG00000019153) #9	MPP4 (ENSPSMG00000019065) #10	TMEM237 (ENSPSMG00000018963) #11	ENSPSMG00000018918	ENSPSMG00000018917 #12	STRADB (ENSPSMG00000018902) #13	TRAK2 (ENSPSMG00000018832) #15	FLACC1 (ENSPSMG00000018772) #16	CASP8 (ENSPSMG00000018768) #17	CASP10 (ENSPSMG00000018750) #18	CFLAR (ENSPSMG00000018734) #19	NDUFB3 (ENSPSMG00000018710) #20	HYCC2 (ENSPSMG00000018701) #21	ORC2 (ENSPSMG00000018686) #22	NIF3L1 (ENSPSMG00000018669) #23	ENSPSMG00000018655 #24	CLK1 (ENSPSMG00000018548) #25	BZW1 (ENSPSMG00000018420) #26	ENSPSMG00000018325 #27
Coquerels sifaka	MODERN SPECIES	94	FZD7 (ENSPCOG00000013463) #7	CDK15 (ENSPCOG00000018541) #8	ALS2 (ENSPCOG00000026147) #9	MPP4 (ENSPCOG00000023532) #10	TMEM237 (ENSPCOG00000006321) #11	ENSPCOG00000019752 #12	ENSPCOG00000015949	STRADB (ENSPCOG00000017505) #13	TRAK2 (ENSPCOG00000023263) #15	FLACC1 (ENSPCOG00000023669) #16	CASP8 (ENSPCOG00000024032) #17	CASP10 (ENSPCOG00000021615) #18	CFLAR (ENSPCOG00000011330) #19	NDUFB3 (ENSPCOG00000020529) #20	HYCC2 (ENSPCOG00000014611) #21	ORC2 (ENSPCOG00000021783) #22	NIF3L1 (ENSPCOG00000018022) #23	PPIL3 (ENSPCOG00000028235) #24	CLK1 (ENSPCOG00000018180) #25	ENSPCOG00000015831 #26	ENSPCOG00000015215 #27	ENSPCOG00000027597 ##27	AOX1 (ENSPCOG00000021840) #28	ENSPCOG00000024135 #29	SPATS2L (ENSPCOG00000015945) #31	MAIP1 (ENSPCOG00000008943) #32	C2orf69 (ENSPCOG00000006950) #34	FTCDNL1 (ENSPCOG00000019867) #35	ENSPCOG00000014379 #37
Bushbaby	MODERN SPECIES	128	FZD7 (ENSOGAG00000032455) #7	ENSOGAG00000032427	CDK15 (ENSOGAG00000010775) #8	ALS2 (ENSOGAG00000010767) #9	MPP4 (ENSOGAG00000010759) #10	TMEM237 (ENSOGAG00000010754) #11	ENSOGAG00000028424 #12	STRADB (ENSOGAG00000010744) #13	TRAK2 (ENSOGAG00000010739) #15	FLACC1 (ENSOGAG00000010736) #16	CASP8 (ENSOGAG00000010735) #17	CASP10 (ENSOGAG00000010732) #18	CFLAR (ENSOGAG00000011604) #19	NDUFB3 (ENSOGAG00000013054) #20	HYCC2 (ENSOGAG00000012336) #21	ORC2 (ENSOGAG00000012329) #22	NIF3L1 (ENSOGAG00000025311) #23	PPIL3 (ENSOGAG00000007087) #24	CLK1 (ENSOGAG00000012328) #25	BZW1 (ENSOGAG00000012326) #26	AOX2 (ENSOGAG00000025249) #27	AOX4 (ENSOGAG00000030158) ##27	AOX1 (ENSOGAG00000006066) #28	SGO2 (ENSOGAG00000006064) #29	KCTD18 (ENSOGAG00000012335) #30	SPATS2L (ENSOGAG00000012331) #31	MAIP1 (ENSOGAG00000006965) #32	C2orf69 (ENSOGAG00000028317) #34	ENSOGAG00000027028 #35	SATB2 (ENSOGAG00000006949) #37
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Tree shrew	MODERN SPECIES	5400															HYCC2 (ENSTBEG00000001135) #21	ORC2 (ENSTBEG00000000763) #22	NIF3L1 (ENSTBEG00000000704) #23	ENSTBEG00000000664	CLK1 (ENSTBEG00000000561) #25	BZW1 (ENSTBEG00000000430) #26
Glires	ANCESTRAL SPECIES	14	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Rodentia	ANCESTRAL SPECIES	14	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390.d #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001017267	Gm973 (ENSCGRG00001017041)	Fzd7 (ENSCGRG00001010812) #7	Cdk15 (ENSCGRG00001018439) #8	Als2 (ENSCGRG00001020892) #9	Mpp4 (ENSCGRG00001017399) #10	Tmem237 (ENSCGRG00001016616) #11	ENSCGRG00001018260 #12	Stradb (ENSCGRG00001016031) #13	Trak2 (ENSCGRG00001017078) #15	Flacc1 (ENSCGRG00001018682) #16	Casp8 (ENSCGRG00001020998) #17	Cflar (ENSCGRG00001016122) #19	Ndufb3 (ENSCGRG00001023485) #20	Hycc2 (ENSCGRG00001015587) #21	Orc2 (ENSCGRG00001016911) #22	ENSCGRG00001018137 #23	Ppil3 (ENSCGRG00001021470) #24	Clk1 (ENSCGRG00001018410) #25	Bzw1 (ENSCGRG00001017178) #26	Aox2 (ENSCGRG00001017735) #27	Aox4 (ENSCGRG00001016089) ##27	Aox3 (ENSCGRG00001016559) ##27	Aox1 (ENSCGRG00001018485) #28	ENSCGRG00001016045 #29	Kctd18 (ENSCGRG00001016666) #30	Spats2l (ENSCGRG00001019123) #31	Maip1 (ENSCGRG00001018639) #32	Tyw5 (ENSCGRG00001015297) #33	1700066M21Rik (ENSCGRG00001016585) #34	Satb2 (ENSCGRG00001019669) #37
Golden Hamster	MODERN SPECIES	640	Fzd7 (ENSMAUG00000010411) #7	Cdk15 (ENSMAUG00000017599) #8	Als2 (ENSMAUG00000013493) #9	Mpp4 (ENSMAUG00000006352) #10	Tmem237 (ENSMAUG00000022020) #11	ENSMAUG00000021781 #12	ENSMAUG00000003249 #13	Trak2 (ENSMAUG00000001208) #15	Flacc1 (ENSMAUG00000018077) #16	Casp8 (ENSMAUG00000018476) #17	ENSMAUG00000008355	ENSMAUG00000017788	ENSMAUG00000019942 #19	Ndufb3 (ENSMAUG00000017559) #20	Hycc2 (ENSMAUG00000020858) #21	Orc2 (ENSMAUG00000019370) #22	Nif3l1 (ENSMAUG00000019604) #23	Ppil3 (ENSMAUG00000020492) #24	Clk1 (ENSMAUG00000007794) #25	Bzw1 (ENSMAUG00000004813) #26	Aox2 (ENSMAUG00000001162) #27	Aox4 (ENSMAUG00000006193) ##27	Aox3 (ENSMAUG00000019186) ##27
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Northern American deer mouse	MODERN SPECIES	4	Gm973 (ENSPEMG00000022698)	Fzd7 (ENSPEMG00000008425) #7	Cdk15 (ENSPEMG00000021418) #8	Als2 (ENSPEMG00000010475) #9	Mpp4 (ENSPEMG00000021808) #10	Tmem237 (ENSPEMG00000022850) #11	ENSPEMG00000022643 #12	Stradb (ENSPEMG00000023067) #13	Trak2 (ENSPEMG00000016894) #15	Flacc1 (ENSPEMG00000023426) #16	Casp8 (ENSPEMG00000021544) #17	Cflar (ENSPEMG00000022446) #19	ENSPEMG00000031091	Ndufb3 (ENSPEMG00000018280) #20	Hycc2 (ENSPEMG00000014604) #21	Orc2 (ENSPEMG00000010035) #22	Nif3l1 (ENSPEMG00000023040) #23	Ppil3 (ENSPEMG00000011585) #24	Clk1 (ENSPEMG00000022508) #25	ENSPEMG00000013940 #26	Aox2 (ENSPEMG00000022861) #27	ENSPEMG00000027085 ##27	Aox1 (ENSPEMG00000000656) #28	ENSPEMG00000020091 #29	Kctd18 (ENSPEMG00000028635) #30	Spats2l (ENSPEMG00000020003) #31	Maip1 (ENSPEMG00000015287) #32	Tyw5 (ENSPEMG00000009506) #33	1700066M21Rik (ENSPEMG00000001657) #34	Satb2 (ENSPEMG00000013811) #37	Hsfy2 (ENSPEMG00000029057)
Prairie vole	MODERN SPECIES	91	Nop58 (ENSMOCG00000007756)	ENSMOCG00000000233	Gm973 (ENSMOCG00000001667)	Fzd7 (ENSMOCG00000006556) #7	Cdk15 (ENSMOCG00000007901) #8	ENSMOCG00000014925 #9	Mpp4 (ENSMOCG00000009328) #10	Tmem237 (ENSMOCG00000000108) #11	ENSMOCG00000000428 #12	Stradb (ENSMOCG00000018130) #13	Trak2 (ENSMOCG00000020133) #15	Flacc1 (ENSMOCG00000015479) #16	Casp8 (ENSMOCG00000001017) #17	ENSMOCG00000019249 #19	Hycc2 (ENSMOCG00000012367) #21	Orc2 (ENSMOCG00000016158) #22	Nif3l1 (ENSMOCG00000012327) #23	ENSMOCG00000013096 #24	ENSMOCG00000005608 #25	Bzw1 (ENSMOCG00000008375) #26	Aox2 (ENSMOCG00000018237) #27	Aox4 (ENSMOCG00000015766) ##27	Aox1 (ENSMOCG00000001195) #28	ENSMOCG00000012099 #29	Kctd18 (ENSMOCG00000018835) #30	Spats2l (ENSMOCG00000006136) #31	Maip1 (ENSMOCG00000008182) #32	Tyw5 (ENSMOCG00000018540) #33	1700066M21Rik (ENSMOCG00000018970) #34	ENSMOCG00000005756 #37	Hsfy2 (ENSMOCG00000013974)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.k #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Mus	ANCESTRAL SPECIES	5	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.k #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b.m.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.k #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b.m.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493.c #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.k #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.p #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b.m.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493.c #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.k #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.p #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b.m.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493.c #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000157452
Steppe mouse	MODERN SPECIES	51														ENSMSIG00000023789 #20	Hycc2 (ENSMSIG00000023763) #21	Orc2 (ENSMSIG00000023700) #22	Nif3l1 (ENSMSIG00000023627) #23	Ppil3 (ENSMSIG00000023590) #24	Clk1 (ENSMSIG00000023554) #25	ENSMSIG00000023501 #26	Aox2 (ENSMSIG00000023453) #27	Aox4 (ENSMSIG00000023366) ##27	Aox3 (ENSMSIG00000023322) ##27	Aox1 (ENSMSIG00000023233) #28	Sgo2a (ENSMSIG00000023212) #29	Kctd18 (ENSMSIG00000023185) #30	Spats2l (ENSMSIG00000023085) #31
spretus	MODERN SPECIES		Nop58 (MGP_SPRETEiJ_G0014988)	Sumo1 (MGP_SPRETEiJ_G0014987)	Gm973 (MGP_SPRETEiJ_G0014986)	Fzd7 (MGP_SPRETEiJ_G0014985) #7	Cdk15 (MGP_SPRETEiJ_G0014984) #8	Als2 (MGP_SPRETEiJ_G0014983) #9	Mpp4 (MGP_SPRETEiJ_G0014982) #10	Tmem237 (MGP_SPRETEiJ_G0014981) #11	MGP_SPRETEiJ_G0014980 #12	Stradb (MGP_SPRETEiJ_G0014979) #13	Trak2 (MGP_SPRETEiJ_G0014978) #15	Casp8 (MGP_SPRETEiJ_G0014976) #17	Cflar (MGP_SPRETEiJ_G0014975) #19	Ndufb3 (MGP_SPRETEiJ_G0014974) #20	Hycc2 (MGP_SPRETEiJ_G0014973) #21	Orc2 (MGP_SPRETEiJ_G0014972) #22	Nif3l1 (MGP_SPRETEiJ_G0014971) #23	Ppil3 (MGP_SPRETEiJ_G0014970) #24	Clk1 (MGP_SPRETEiJ_G0014969) #25	Bzw1 (MGP_SPRETEiJ_G0014968) #26	Aox2 (MGP_SPRETEiJ_G0014967) #27	Aox4 (MGP_SPRETEiJ_G0014966) ##27	Aox3 (MGP_SPRETEiJ_G0014965) ##27	Aox1 (MGP_SPRETEiJ_G0014964) #28	Sgo2a (MGP_SPRETEiJ_G0014963) #29	Kctd18 (MGP_SPRETEiJ_G0014962) #30	Spats2l (MGP_SPRETEiJ_G0014961) #31	Maip1 (MGP_SPRETEiJ_G0014960) #32	Tyw5 (MGP_SPRETEiJ_G0014959) #33	Satb2 (MGP_SPRETEiJ_G0014957) #37	Hsfy2 (MGP_SPRETEiJ_G0014956)
Mouse	MODERN SPECIES		Sumo1 (ENSMUSG00000026021)	Gm973 (ENSMUSG00000047361)	Fzd7 (ENSMUSG00000041075) #7	Cdk15 (ENSMUSG00000026023) #8	Als2 (ENSMUSG00000026024) #9	Mpp4 (ENSMUSG00000079550) #10	Tmem237 (ENSMUSG00000038079) #11	C2cd6 (ENSMUSG00000072295) #12	Stradb (ENSMUSG00000026027) #13	Trak2 (ENSMUSG00000026028) #15	Casp8 (ENSMUSG00000026029) #17	Cflar (ENSMUSG00000026031) #19	Flacc1 (ENSMUSG00000047528) #16	Ndufb3 (ENSMUSG00000026032) #20	Hycc2 (ENSMUSG00000038174) #21	Orc2 (ENSMUSG00000026037) #22	Nif3l1 (ENSMUSG00000026036) #23	Ppil3 (ENSMUSG00000026035) #24	Clk1 (ENSMUSG00000026034) #25	Bzw1 (ENSMUSG00000051223) #26	Aox2 (ENSMUSG00000079554) #27	Aox4 (ENSMUSG00000038242) ##27	Aox3 (ENSMUSG00000064294) ##27	Aox1 (ENSMUSG00000063558) #28	Sgo2a (ENSMUSG00000026039) #29	Kctd18 (ENSMUSG00000054770) #30	Spats2l (ENSMUSG00000038305) #31	Maip1 (ENSMUSG00000025971) #32	Tyw5 (ENSMUSG00000048495) #33	1700066M21Rik (ENSMUSG00000038323) #34	Satb2 (ENSMUSG00000038331) #37
Ryukyu mouse	MODERN SPECIES		Nop58 (MGP_CAROLIEiJ_G0014181)	Sumo1 (MGP_CAROLIEiJ_G0014180)	Gm973 (MGP_CAROLIEiJ_G0014179)	Fzd7 (MGP_CAROLIEiJ_G0014178) #7	Cdk15 (MGP_CAROLIEiJ_G0014177) #8	Als2 (MGP_CAROLIEiJ_G0014176) #9	Mpp4 (MGP_CAROLIEiJ_G0014175) #10	Tmem237 (MGP_CAROLIEiJ_G0014174) #11	MGP_CAROLIEiJ_G0014173 #12	Stradb (MGP_CAROLIEiJ_G0014172) #13	Trak2 (MGP_CAROLIEiJ_G0014171) #15	Casp8 (MGP_CAROLIEiJ_G0014170) #17	Cflar (MGP_CAROLIEiJ_G0014169) #19	Ndufb3 (MGP_CAROLIEiJ_G0014168) #20	Hycc2 (MGP_CAROLIEiJ_G0014167) #21	Orc2 (MGP_CAROLIEiJ_G0014166) #22	Nif3l1 (MGP_CAROLIEiJ_G0014165) #23	Ppil3 (MGP_CAROLIEiJ_G0014164) #24	Clk1 (MGP_CAROLIEiJ_G0014163) #25	Bzw1 (MGP_CAROLIEiJ_G0014162) #26	Aox2 (MGP_CAROLIEiJ_G0014161) #27	Aox4 (MGP_CAROLIEiJ_G0014160) ##27	Aox3 (MGP_CAROLIEiJ_G0014159) ##27	Aox1 (MGP_CAROLIEiJ_G0014158) #28	MGP_CAROLIEiJ_G0014157 #29	MGP_CAROLIEiJ_G0014156 #29	Kctd18 (MGP_CAROLIEiJ_G0014155) #30	Spats2l (MGP_CAROLIEiJ_G0014154) #31	Maip1 (MGP_CAROLIEiJ_G0014153) #32	Tyw5 (MGP_CAROLIEiJ_G0014152) #33	1700066M21Rik (MGP_CAROLIEiJ_G0014151) #34
Shrew mouse	MODERN SPECIES	18	Nop58 (MGP_PahariEiJ_G0027419)	MGP_PahariEiJ_G0027418	Gm973 (MGP_PahariEiJ_G0027417)	Fzd7 (MGP_PahariEiJ_G0027416) #7	Cdk15 (MGP_PahariEiJ_G0027415) #8	Als2 (MGP_PahariEiJ_G0027414) #9	Mpp4 (MGP_PahariEiJ_G0027413) #10	Tmem237 (MGP_PahariEiJ_G0027412) #11	MGP_PahariEiJ_G0027411 #12	Stradb (MGP_PahariEiJ_G0027410) #13	Trak2 (MGP_PahariEiJ_G0027409) #15	Casp8 (MGP_PahariEiJ_G0027408) #17	Cflar (MGP_PahariEiJ_G0027407) #19	Ndufb3 (MGP_PahariEiJ_G0027406) #20	Hycc2 (MGP_PahariEiJ_G0027405) #21	Orc2 (MGP_PahariEiJ_G0027404) #22	Nif3l1 (MGP_PahariEiJ_G0027403) #23	Ppil3 (MGP_PahariEiJ_G0027402) #24	Clk1 (MGP_PahariEiJ_G0027401) #25	Bzw1 (MGP_PahariEiJ_G0027400) #26	Aox4 (MGP_PahariEiJ_G0027399) ##27	Aox3 (MGP_PahariEiJ_G0027398) ##27	Aox1 (MGP_PahariEiJ_G0027397) #28	Sgo2a (MGP_PahariEiJ_G0027396) #29	Kctd18 (MGP_PahariEiJ_G0027395) #30	Spats2l (MGP_PahariEiJ_G0027394) #31	Maip1 (MGP_PahariEiJ_G0027393) #32	Tyw5 (MGP_PahariEiJ_G0027392) #33	1700066M21Rik (MGP_PahariEiJ_G0027391) #34	Satb2 (MGP_PahariEiJ_G0027390) #37	Hsfy2 (MGP_PahariEiJ_G0027389)
Rat	MODERN SPECIES	19	Fzd7 (ENSRNOG00000016119) #7	Cdk15 (ENSRNOG00000022899) #8	AABR07067814.1 (ENSRNOG00000032289)	Als2 (ENSRNOG00000023280) #9	LOC120094797 (ENSRNOG00000032860)	Mpp4 (ENSRNOG00000010486) #10	Tmem237 (ENSRNOG00000024085) #11	C2cd6 (ENSRNOG00000012637) #12	Stradb (ENSRNOG00000010728) #13	Trak2 (ENSRNOG00000010881) #15	Flacc1 (ENSRNOG00000024917) #16	Casp8 (ENSRNOG00000012331) #17	Cflar (ENSRNOG00000012473) #19	Ndufb3 (ENSRNOG00000011825) #20	Hycc2 (ENSRNOG00000025079) #21	Orc2 (ENSRNOG00000012558) #22	Nif3l1 (ENSRNOG00000013446) #23	Ppil3 (ENSRNOG00000013636)	Clk1 (ENSRNOG00000025768) #25	Bzw1 (ENSRNOG00000013977) #26	Aox2 (ENSRNOG00000033923) #27	ENSRNOG00000068995	Aox3 (ENSRNOG00000014555) ##27	Aox1 (ENSRNOG00000015354) #28	Sgo2 (ENSRNOG00000027035) #29	Kctd18 (ENSRNOG00000027091) #30	Spats2l (ENSRNOG00000016012) #31	Maip1 (ENSRNOG00000015983) #32	Tyw5 (ENSRNOG00000010100) #33	RGD1306941 (ENSRNOG00000010185) #34	Satb2 (ENSRNOG00000010188) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	417																ENSNGAG00000023509 #22	ENSNGAG00000022183 #23	Ppil3 (ENSNGAG00000014999) #24	ENSNGAG00000010384 #25	Bzw1 (ENSNGAG00000014200) #26	Aox2 (ENSNGAG00000021935) #27	Aox4 (ENSNGAG00000001220) ##27	Aox3 (ENSNGAG00000019159) ##27	Aox1 (ENSNGAG00000018103) #28	ENSNGAG00000017175 #29	Kctd18 (ENSNGAG00000011886) #30	Spats2l (ENSNGAG00000009131) #31	Maip1 (ENSNGAG00000013388) #32	Tyw5 (ENSNGAG00000022701) #33	1700066M21Rik (ENSNGAG00000015731) #34	Satb2 (ENSNGAG00000023604) #37
Lesser Egyptian jerboa	MODERN SPECIES	52	Nop58 (ENSJJAG00000018213)	ENSJJAG00000022745	Gm973 (ENSJJAG00000024266)	Fzd7 (ENSJJAG00000011395) #7	Cdk15 (ENSJJAG00000013533) #8	Als2 (ENSJJAG00000017902) #9	Mpp4 (ENSJJAG00000000487) #10	Tmem237 (ENSJJAG00000021833) #11	Stradb (ENSJJAG00000021748) #13	Trak2 (ENSJJAG00000019852) #15	Flacc1 (ENSJJAG00000000467) #16	Casp8 (ENSJJAG00000014714) #17	Cflar (ENSJJAG00000024196) #19	Hycc2 (ENSJJAG00000022468) #21	ENSJJAG00000010907	Orc2 (ENSJJAG00000011615) #22	Nif3l1 (ENSJJAG00000012006) #23	ENSJJAG00000013473	Clk1 (ENSJJAG00000024354) #25	Bzw1 (ENSJJAG00000022065) #26	Aox2 (ENSJJAG00000011668) #27	Aox4 (ENSJJAG00000017799) ##27	Aox1 (ENSJJAG00000019598) #28	ENSJJAG00000015058 #29	Kctd18 (ENSJJAG00000016069) #30	Spats2l (ENSJJAG00000019268) #31	ENSJJAG00000010933	ENSJJAG00000012063	Maip1 (ENSJJAG00000023816) #32	Tyw5 (ENSJJAG00000019361) #33	1700066M21Rik (ENSJJAG00000019976) #34
Kangaroo rat	MODERN SPECIES	320	Wdr12 (ENSDORG00000015294)	Ica1l (ENSDORG00000015292)	ENSDORG00000015288	Bmpr2 (ENSDORG00000009209)	ENSDORG00000025164	Fzd7 (ENSDORG00000014396) #7	Cdk15 (ENSDORG00000015415) #8	Als2 (ENSDORG00000001846) #9	Mpp4 (ENSDORG00000001842) #10	Tmem237 (ENSDORG00000001840) #11	Stradb (ENSDORG00000001838) #13	Trak2 (ENSDORG00000001835) #15	ENSDORG00000025646	ENSDORG00000024018	Hycc2 (ENSDORG00000029531) #21	Orc2 (ENSDORG00000007391) #22	Nif3l1 (ENSDORG00000007390) #23	Ppil3 (ENSDORG00000007389) #24	Clk1 (ENSDORG00000007388) #25	Bzw1 (ENSDORG00000029865) #26	Aox2 (ENSDORG00000026718) #27	Aox4 (ENSDORG00000026668) ##27	Aox3 (ENSDORG00000025305) ##27	Aox1 (ENSDORG00000004358) #28	Kctd18 (ENSDORG00000007817) #30	Spats2l (ENSDORG00000007816) #31	Maip1 (ENSDORG00000012569) #32	Tyw5 (ENSDORG00000012567) #33	Satb2 (ENSDORG00000001292) #37	Plcl1 (ENSDORG00000000485)	Boll (ENSDORG00000010791)
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00390000000560.m.a.b	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.v #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000012178.g.a.a
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00390000000560.m.a.b	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.v #26	ENSGT00950000183114.a.b.b.f.a.b #27
Arctic ground squirrel	MODERN SPECIES	317	KIAA2012 (ENSUPAG00010014115)	FZD7 (ENSUPAG00010014150) #7	CDK15 (ENSUPAG00010014153) #8	ALS2 (ENSUPAG00010014184) #9	MPP4 (ENSUPAG00010014266) #10	TMEM237 (ENSUPAG00010014479) #11	ENSUPAG00010014524 #12	STRADB (ENSUPAG00010014591) #13	TRAK2 (ENSUPAG00010014606) #15	FLACC1 (ENSUPAG00010014658) #16	CASP8 (ENSUPAG00010014705) #17	CASP10 (ENSUPAG00010014765) #18	CFLAR (ENSUPAG00010014940) #19	NDUFB3 (ENSUPAG00010014966) #20	HYCC2 (ENSUPAG00010014985) #21	ORC2 (ENSUPAG00010015014) #22	NIF3L1 (ENSUPAG00010015151) #23	PPIL3 (ENSUPAG00010015181) #24	CLK1 (ENSUPAG00010015196) #25	ENSUPAG00010015320 #26	ENSUPAG00010015353 #27
Squirrel	MODERN SPECIES	326	FZD7 (ENSSTOG00000020705) #7	CDK15 (ENSSTOG00000016128) #8	ALS2 (ENSSTOG00000016119) #9	ENSSTOG00000029531	MPP4 (ENSSTOG00000025322) #10	TMEM237 (ENSSTOG00000025175) #11	STRADB (ENSSTOG00000021132) #13	TRAK2 (ENSSTOG00000002930) #15	FLACC1 (ENSSTOG00000006296) #16	CASP8 (ENSSTOG00000011342) #17	ENSSTOG00000022094	CASP10 (ENSSTOG00000002364) #18	CFLAR (ENSSTOG00000009642) #19	NDUFB3 (ENSSTOG00000009635) #20	HYCC2 (ENSSTOG00000023641) #21	ORC2 (ENSSTOG00000019442) #22	NIF3L1 (ENSSTOG00000030641) #23	PPIL3 (ENSSTOG00000028255) #24	CLK1 (ENSSTOG00000009578) #25	ENSSTOG00000030689 #26	ENSSTOG00000020989 #27
Alpin marmot	MODERN SPECIES	8	KIAA2012 (ENSMMMG00000012837)	CDK15 (ENSMMMG00000012752) #8	ALS2 (ENSMMMG00000012683) #9	ENSMMMG00000012669	MPP4 (ENSMMMG00000012482) #10	TMEM237 (ENSMMMG00000012468) #11	ENSMMMG00000012437 #12	STRADB (ENSMMMG00000012410) #13	TRAK2 (ENSMMMG00000012358) #15	FLACC1 (ENSMMMG00000012333) #16	CASP8 (ENSMMMG00000012315) #17	CASP10 (ENSMMMG00000012307) #18	CFLAR (ENSMMMG00000012269) #19	ENSMMMG00000012253 #20	HYCC2 (ENSMMMG00000012182) #21	ORC2 (ENSMMMG00000012136) #22	NIF3L1 (ENSMMMG00000012077) #23	PPIL3 (ENSMMMG00000012069) #24	CLK1 (ENSMMMG00000012051) #25	ENSMMMG00000012026 #26	ENSMMMG00000011976 #27	ENSMMMG00000011959	ENSMMMG00000011912 ##27	AOX1 (ENSMMMG00000011886) #28	ENSMMMG00000011877 #29	KCTD18 (ENSMMMG00000011839) #30	SPATS2L (ENSMMMG00000011689) #31	MAIP1 (ENSMMMG00000011679) #32	TYW5 (ENSMMMG00000011668) #33	C2orf69 (ENSMMMG00000011660) #34	FTCDNL1 (ENSMMMG00000011655) #35
Eurasian red squirrel	MODERN SPECIES	12	TMEM237 (ENSSVLG00005004927) #11	ENSSVLG00005004791 #12	STRADB (ENSSVLG00005004739) #13	ENSSVLG00005004684 #15	FLACC1 (ENSSVLG00005004644) #16	ENSSVLG00005004626	CASP8 (ENSSVLG00005004545) #17	ENSSVLG00005004469	ENSSVLG00005004452	CASP10 (ENSSVLG00005004333) #18	ENSSVLG00005004275	CFLAR (ENSSVLG00005004210) #19	NDUFB3 (ENSSVLG00005004178) #20	HYCC2 (ENSSVLG00005004160) #21	ENSSVLG00005004143	ORC2 (ENSSVLG00005004127) #22	ENSSVLG00005004114	NIF3L1 (ENSSVLG00005004091) #23	PPIL3 (ENSSVLG00005004070) #24	CLK1 (ENSSVLG00005004020) #25	BZW1 (ENSSVLG00005003945) #26	ENSSVLG00005003845 #27	ENSSVLG00005003767 ##27	AOX1 (ENSSVLG00005003683) #28	SGO2 (ENSSVLG00005003633) #29	ENSSVLG00005003604 #30	SPATS2L (ENSSVLG00005003512) #31	MAIP1 (ENSSVLG00005003433) #32	TYW5 (ENSSVLG00005003405) #33	C2orf69 (ENSSVLG00005003387) #34	FTCDNL1 (ENSSVLG00005003343) #35
Hystricomorpha	ANCESTRAL SPECIES	20					ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Hystricomorpha_a	ANCESTRAL SPECIES	17					ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Hystricomorpha_b	ANCESTRAL SPECIES	24						ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Long-tailed chinchilla	MODERN SPECIES	110						ALS2 (ENSCLAG00000012306) #9	MPP4 (ENSCLAG00000013668) #10	TMEM237 (ENSCLAG00000011765) #11	STRADB (ENSCLAG00000012985) #13	TRAK2 (ENSCLAG00000013378) #15	FLACC1 (ENSCLAG00000013356) #16	CASP8 (ENSCLAG00000012773) #17	CFLAR (ENSCLAG00000013322) #19	NDUFB3 (ENSCLAG00000012349) #20	HYCC2 (ENSCLAG00000011177) #21	ORC2 (ENSCLAG00000013209) #22	NIF3L1 (ENSCLAG00000013524) #23	PPIL3 (ENSCLAG00000014050) #24	CLK1 (ENSCLAG00000011455) #25	BZW1 (ENSCLAG00000012079) #26	ENSCLAG00000011199 #27	ENSCLAG00000014402 ##27	AOX1 (ENSCLAG00000011481) #28	ENSCLAG00000012456 #29	ENSCLAG00000014377 #30	SPATS2L (ENSCLAG00000013167) #31	MAIP1 (ENSCLAG00000011913) #32	TYW5 (ENSCLAG00000012009) #33	C2orf69 (ENSCLAG00000012813) #34	SATB2 (ENSCLAG00000016994) #37	PLCL1 (ENSCLAG00000016098)
Degu	MODERN SPECIES	66			ENSODEG00000010587	ENSODEG00000019906	ENSODEG00000008122	ALS2 (ENSODEG00000007275) #9	MPP4 (ENSODEG00000009252) #10	TMEM237 (ENSODEG00000009685) #11	STRADB (ENSODEG00000010540) #13	TRAK2 (ENSODEG00000007402) #15	CASP8 (ENSODEG00000009065) #17	CFLAR (ENSODEG00000009559) #19	NDUFB3 (ENSODEG00000010233) #20	HYCC2 (ENSODEG00000008316) #21	ENSODEG00000007860	ORC2 (ENSODEG00000008853) #22	NIF3L1 (ENSODEG00000008894) #23	PPIL3 (ENSODEG00000007592) #24	CLK1 (ENSODEG00000009021) #25	ENSODEG00000019563	ENSODEG00000008411 #26	ENSODEG00000008135 #27	ENSODEG00000011138 ##27	AOX1 (ENSODEG00000012914) #28	ENSODEG00000009211 #30	SPATS2L (ENSODEG00000009851) #31	MAIP1 (ENSODEG00000008914) #32	TYW5 (ENSODEG00000009836) #33	C2orf69 (ENSODEG00000008700) #34	SATB2 (ENSODEG00000008383) #37	PLCL1 (ENSODEG00000008918)
Guinea pig	MODERN SPECIES	104					ALS2 (ENSCPOG00000014263) #9	MPP4 (ENSCPOG00000014262) #10	TMEM237 (ENSCPOG00000040314) #11	STRADB (ENSCPOG00000013028) #13	TRAK2 (ENSCPOG00000007002) #15	ENSCPOG00000024803 #16	CASP8 (ENSCPOG00000009618) #17	CASP10 (ENSCPOG00000024282) #18	CFLAR (ENSCPOG00000000098) #19	NDUFB3 (ENSCPOG00000038261) #20	HYCC2 (ENSCPOG00000010108) #21	ORC2 (ENSCPOG00000004552) #22	NIF3L1 (ENSCPOG00000008572) #23	PPIL3 (ENSCPOG00000008570) #24	CLK1 (ENSCPOG00000027067) #25	ENSCPOG00000010449 #26	ENSCPOG00000019962 #27	ENSCPOG00000033032 ##27	Aox1 (ENSCPOG00000025955) #28	ENSCPOG00000002722 #29	ENSCPOG00000012077 #30	SPATS2L (ENSCPOG00000003190) #31	MAIP1 (ENSCPOG00000003800) #32	TYW5 (ENSCPOG00000035856) #33	C2orf69 (ENSCPOG00000009934) #34	SATB2 (ENSCPOG00000015198) #37	PLCL1 (ENSCPOG00000011478)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000008087	ENSHGLG00000001281	ENSHGLG00000036950	ENSHGLG00000000589	ENSHGLG00000049200	ENSHGLG00000019899	ENSHGLG00000035836	ENSHGLG00000046184	ENSHGLG00000000440	ENSHGLG00000035585	ENSHGLG00000042573	ENSHGLG00000035177 #18	CFLAR (ENSHGLG00000042118) #19	NDUFB3 (ENSHGLG00000035364) #20	ENSHGLG00000009432 #21	ENSHGLG00000010323 #22	ENSHGLG00000035207	NIF3L1 (ENSHGLG00000010669) #23	PPIL3 (ENSHGLG00000035729) #24	Clk1 (ENSHGLG00000011322) #25	BZW1 (ENSHGLG00000011961) #26	ENSHGLG00000012205 #27	Aox4 (ENSHGLG00000012471) ##27	AOX1 (ENSHGLG00000012876) #28	SGO2 (ENSHGLG00000015359) #29	ENSHGLG00000047532	ENSHGLG00000015370 #30	SPATS2L (ENSHGLG00000015420) #31	ENSHGLG00000017615	MAIP1 (ENSHGLG00000017548) #32	TYW5 (ENSHGLG00000017557) #33
Naked mole-rat female	MODERN SPECIES	14	OR6B1 (ENSHGLG00000020632)	ENSHGLG00000020363	ENSHGLG00000008982	ENSHGLG00000011877	ENSHGLG00000016410	ENSHGLG00000020881	ENSHGLG00000021377	ENSHGLG00000049035	EPHA1 (ENSHGLG00000007593)	ZYX (ENSHGLG00000011336)	FAM131B (ENSHGLG00000008404)	CLCN1 (ENSHGLG00000005159)	CASP2 (ENSHGLG00000034165)	ENSHGLG00000045307	GSTK1 (ENSHGLG00000043428)	ENSHGLG00000047349 #22	ENSHGLG00000020620	PIP (ENSHGLG00000044011)	ENSHGLG00000043959	ENSHGLG00000040648	KEL (ENSHGLG00000015502)	ENSHGLG00000038976	ENSHGLG00000006227	ENSHGLG00000032016	ENSHGLG00000000335	ENSHGLG00000010041	ENSHGLG00000011697	ENSHGLG00000030828	ENSHGLG00000050664	ENSHGLG00000036707	ENSHGLG00000039158
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Rabbit	MODERN SPECIES	18	TMEM237 (ENSOCUG00000012462) #11	ENSOCUG00000035542 #12	ENSOCUG00000027085 #12	STRADB (ENSOCUG00000022279) #13	TRAK2 (ENSOCUG00000000156) #15	FLACC1 (ENSOCUG00000007135) #16	ENSOCUG00000007128 #17	ENSOCUG00000036865 #17	ENSOCUG00000024651	ENSOCUG00000002567	CASP10 (ENSOCUG00000004510) #18	CFLAR (ENSOCUG00000011072) #19	NDUFB3 (ENSOCUG00000011069) #20	ENSOCUG00000016854	HYCC2 (ENSOCUG00000010690) #21	ORC2 (ENSOCUG00000010675) #22	ENSOCUG00000021325	NIF3L1 (ENSOCUG00000010667) #23	PPIL3 (ENSOCUG00000010661) #24	CLK1 (ENSOCUG00000010653) #25	ENSOCUG00000010647 #26	ENSOCUG00000026480 #27	ENSOCUG00000024593 ##27	ENSOCUG00000035654 ##27	AOX1 (ENSOCUG00000013971) #28	ENSOCUG00000000547 #29	ENSOCUG00000037416 #29	KCTD18 (ENSOCUG00000011556) #30	SPATS2L (ENSOCUG00000011549) #31	ENSOCUG00000017946 #32	ENSOCUG00000035705 #33
Pika	MODERN SPECIES	4633												CASP10 (ENSOPRG00000005798) #18	CFLAR (ENSOPRG00000005780) #19	ENSOPRG00000005768	HYCC2 (ENSOPRG00000005742) #21	ORC2 (ENSOPRG00000005718) #22	NIF3L1 (ENSOPRG00000005708) #23	ENSOPRG00000005690	CLK1 (ENSOPRG00000005669) #25	BZW1 (ENSOPRG00000005652) #26
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Carnivora	ANCESTRAL SPECIES	17	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Caniformia	ANCESTRAL SPECIES	14	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Ursidae	ANCESTRAL SPECIES	7	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159.d #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.o #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.f #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Ursus	ANCESTRAL SPECIES	4	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159.d #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.o #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.f #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
American black bear	MODERN SPECIES	1761															ENSUAMG00000011238 #21	ORC2 (ENSUAMG00000011234) #22	NIF3L1 (ENSUAMG00000011232) #23	PPIL3 (ENSUAMG00000011227) #24	CLK1 (ENSUAMG00000011226) #25	BZW1 (ENSUAMG00000011224) #26	ENSUAMG00000011212 #27
Polar bear	MODERN SPECIES	142	KIAA2012 (ENSUMAG00000021861)	FZD7 (ENSUMAG00000021852) #7	CDK15 (ENSUMAG00000021838) #8	ALS2 (ENSUMAG00000021699) #9	MPP4 (ENSUMAG00000021611) #10	TMEM237 (ENSUMAG00000021594) #11	ENSUMAG00000021587 #12	STRADB (ENSUMAG00000021585) #13	TRAK2 (ENSUMAG00000021580) #15	FLACC1 (ENSUMAG00000021573) #16	CASP8 (ENSUMAG00000021570) #17	CASP10 (ENSUMAG00000021566) #18	CFLAR (ENSUMAG00000021563) #19	ENSUMAG00000021560 #20	HYCC2 (ENSUMAG00000021559) #21	ORC2 (ENSUMAG00000021479) #22	PPIL3 (ENSUMAG00000021460) #24	NIF3L1 (ENSUMAG00000021455) #23	CLK1 (ENSUMAG00000021445) #25	BZW1 (ENSUMAG00000021441) #26	ENSUMAG00000021399 #27	ENSUMAG00000021134 ##27	AOX1 (ENSUMAG00000021073) #28	SGO2 (ENSUMAG00000021068) #29	KCTD18 (ENSUMAG00000021066) #30	SPATS2L (ENSUMAG00000021060) #31	MAIP1 (ENSUMAG00000021043) #32	TYW5 (ENSUMAG00000021039) #33	C2orf69 (ENSUMAG00000021037) #34	FTCDNL1 (ENSUMAG00000021033) #35	SATB2 (ENSUMAG00000021003) #37
Giant Panda	MODERN SPECIES	11	KIAA2012 (ENSAMEG00000013230)	FZD7 (ENSAMEG00000019023) #7	CDK15 (ENSAMEG00000013241) #8	ALS2 (ENSAMEG00000013264) #9	MPP4 (ENSAMEG00000013343) #10	TMEM237 (ENSAMEG00000013442) #11	ENSAMEG00000030216	C2CD6 (ENSAMEG00000023801) #12	STRADB (ENSAMEG00000006175) #13	TRAK2 (ENSAMEG00000006116) #15	ENSAMEG00000006088 #16	CASP10 (ENSAMEG00000006047) #18	CFLAR (ENSAMEG00000006033) #19	ENSAMEG00000006027 #20	HYCC2 (ENSAMEG00000005996) #21	ORC2 (ENSAMEG00000005940) #22	NIF3L1 (ENSAMEG00000005921) #23	PPIL3 (ENSAMEG00000005917) #24	CLK1 (ENSAMEG00000005887) #25	BZW1 (ENSAMEG00000005859) #26	AOX2 (ENSAMEG00000005633) #27	AOX4 (ENSAMEG00000005561) ##27	AOX1 (ENSAMEG00000005445) #28	SGO2 (ENSAMEG00000005435) #29	KCTD18 (ENSAMEG00000005423) #30	SPATS2L (ENSAMEG00000005405) #31	MAIP1 (ENSAMEG00000005390) #32	TYW5 (ENSAMEG00000005386) #33	C2orf69 (ENSAMEG00000005381) #34	ENSAMEG00000023460	SATB2 (ENSAMEG00000005350) #37
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202.j #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
American mink	MODERN SPECIES	40	KIAA2012 (ENSNVIG00000007730)	FZD7 (ENSNVIG00000007800) #7	CDK15 (ENSNVIG00000007812) #8	ALS2 (ENSNVIG00000007935) #9	MPP4 (ENSNVIG00000008115) #10	TMEM237 (ENSNVIG00000008223) #11	ENSNVIG00000008322 #12	STRADB (ENSNVIG00000008385) #13	TRAK2 (ENSNVIG00000008449) #15	G5E9S3 (ENSNVIG00000008480) #16	CASP8 (ENSNVIG00000008522) #17	CASP10 (ENSNVIG00000008626) #18	CFLAR (ENSNVIG00000008667) #19	NDUB3 (ENSNVIG00000008792) #20	HYCC2 (ENSNVIG00000008829) #21	ORC2 (ENSNVIG00000008870) #22	NIF3L (ENSNVIG00000008895) #23	ENSNVIG00000008933	ENSNVIG00000008938 #25	ENSNVIG00000008952 #25	BZW1 (ENSNVIG00000008992) #26	ENSNVIG00000009087 #27	ENSNVIG00000009216 ##27	AOX1 (ENSNVIG00000009846) #28	SGO2 (ENSNVIG00000009949) #29	KCTD18 (ENSNVIG00000009981) #30	SPATS2L (ENSNVIG00000010010) #31	MAIP1 (ENSNVIG00000010220) #32	TYW5 (ENSNVIG00000010238) #33	C2orf69 (ENSNVIG00000010249) #34	ENSNVIG00000010260 #35
Ferret	MODERN SPECIES	265	ENSMPUG00000000326	FZD7 (ENSMPUG00000018904) #7	CDK15 (ENSMPUG00000000322) #8	ALS2 (ENSMPUG00000000314) #9	MPP4 (ENSMPUG00000000255) #10	TMEM237 (ENSMPUG00000000252) #11	ENSMPUG00000000250 #12	STRADB (ENSMPUG00000000249) #13	ENSMPUG00000000247 #15	ENSMPUG00000000245 #15	FLACC1 (ENSMPUG00000000243) #16	CASP8 (ENSMPUG00000000240) #17	CASP10 (ENSMPUG00000000231) #18	CFLAR (ENSMPUG00000000230) #19	HYCC2 (ENSMPUG00000000212) #21	ORC2 (ENSMPUG00000000208) #22	NIF3L1 (ENSMPUG00000000206) #23	CLK1 (ENSMPUG00000000201) #25	KLF8 (ENSMPUG00000000194)
Canidae	ANCESTRAL SPECIES	20	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01070000254992	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.c #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01070000254992	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37
Dog	MODERN SPECIES	30	CDK15 (ENSCAFG00845030741) #8	ENSCAFG00845030734	ALS2 (ENSCAFG00845030698) #9	MPP4 (ENSCAFG00845030583) #10	TMEM237 (ENSCAFG00845030434) #11	C2CD6 (ENSCAFG00845030271) #12	STRADB (ENSCAFG00845030183) #13	TRAK2 (ENSCAFG00845030112) #15	FLACC1 (ENSCAFG00845030068) #16	CASP8 (ENSCAFG00845030024) #17	MYCBP (ENSCAFG00845029987)	CASP10 (ENSCAFG00845029977) #18	CFLAR (ENSCAFG00845029893) #19	NDUFB3 (ENSCAFG00845029848) #20	HYCC2 (ENSCAFG00845029821) #21	ORC2 (ENSCAFG00845029735) #22	NIF3L1 (ENSCAFG00845029603) #23	PPIL3 (ENSCAFG00845029569) #24	CLK1 (ENSCAFG00845029455) #25	ENSCAFG00845029244 #26	AOX2 (ENSCAFG00845029172) #27	AOX4 (ENSCAFG00845028797) ##27	RPL21 (ENSCAFG00845028706)	SGO2 (ENSCAFG00845028523) #29	KCTD18 (ENSCAFG00845028480) #30	ENSCAFG00845028453	SPATS2L (ENSCAFG00845028292) #31	MAIP1 (ENSCAFG00845028191) #32	TYW5 (ENSCAFG00845028098) #33	C2orf69 (ENSCAFG00845028048) #34	SATB2 (ENSCAFG00845027789) #37
Dingo	MODERN SPECIES	398	ENSCAFG00020002503	CDK15 (ENSCAFG00020002551) #8	ALS2 (ENSCAFG00020002611) #9	MPP4 (ENSCAFG00020003035) #10	TMEM237 (ENSCAFG00020003328) #11	ENSCAFG00020003343 #12	STRADB (ENSCAFG00020003358) #13	TRAK2 (ENSCAFG00020003375) #15	FLACC1 (ENSCAFG00020003467) #16	CASP8 (ENSCAFG00020003476) #17	CASP10 (ENSCAFG00020003487) #18	ENSCAFG00020003528	CFLAR (ENSCAFG00020003542) #19	NDUFB3 (ENSCAFG00020003552) #20	HYCC2 (ENSCAFG00020003567) #21	ORC2 (ENSCAFG00020003630) #22	NIF3L1 (ENSCAFG00020004364) #23	PPIL3 (ENSCAFG00020004369) #24	CLK1 (ENSCAFG00020004400) #25	ENSCAFG00020004433 #26	ENSCAFG00020004462 #27	ENSCAFG00020004494 ##27	ENSCAFG00020004535	SGO2 (ENSCAFG00020004540) #29	KCTD18 (ENSCAFG00020004542) #30	SPATS2L (ENSCAFG00020004547) #31	MAIP1 (ENSCAFG00020004558) #32	ENSCAFG00020004570 #33	C2orf69 (ENSCAFG00020004572) #34	SATB2 (ENSCAFG00020004584) #37	PLCL1 (ENSCAFG00020004643)
Red fox	MODERN SPECIES	41	ENSVVUG00000018323	FZD7 (ENSVVUG00000018326) #7	CDK15 (ENSVVUG00000018343) #8	ALS2 (ENSVVUG00000018378) #9	MPP4 (ENSVVUG00000018433) #10	TMEM237 (ENSVVUG00000018780) #11	C2CD6 (ENSVVUG00000018827) #12	STRADB (ENSVVUG00000018875) #13	TRAK2 (ENSVVUG00000018884) #15	ALS2CR12 (ENSVVUG00000018915) #16	CASP8 (ENSVVUG00000018943) #17	CASP10 (ENSVVUG00000018953) #18	CFLAR (ENSVVUG00000018963) #19	NDUFB3 (ENSVVUG00000018975) #20	FAM126B (ENSVVUG00000018981) #21	ORC2 (ENSVVUG00000018996) #22	NIF3L1 (ENSVVUG00000019010) #23	PPIL3 (ENSVVUG00000019021) #24	CLK1 (ENSVVUG00000019051) #25	ENSVVUG00000019055	BZW1 (ENSVVUG00000019058) #26	ENSVVUG00000019458 #27	ENSVVUG00000025395 ##27	SGO2 (ENSVVUG00000025845) #29	KCTD18 (ENSVVUG00000025846) #30	ENSVVUG00000025847	SPATS2L (ENSVVUG00000025851) #31	MAIP1 (ENSVVUG00000025867) #32	TYW5 (ENSVVUG00000025871) #33	C2orf69 (ENSVVUG00000025875) #34	SATB2 (ENSVVUG00000025880) #37
Felidae	ANCESTRAL SPECIES	15	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00940000154107.b #29	ENSGT00530000064234.k #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00950000182891.a.a.a	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00940000154107.b #29	ENSGT00530000064234.k #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Tiger	MODERN SPECIES	313	KIAA2012 (ENSPTIG00000013192)	CDK15 (ENSPTIG00000013223) #8	ALS2 (ENSPTIG00000013259) #9	MPP4 (ENSPTIG00000013368) #10	TMEM237 (ENSPTIG00000013692) #11	ENSPTIG00000013739 #12	STRADB (ENSPTIG00000013805) #13	TRAK2 (ENSPTIG00000013824) #15	FLACC1 (ENSPTIG00000013844) #16	CASP8 (ENSPTIG00000013873) #17	ENSPTIG00000008242	CASP10 (ENSPTIG00000013894) #18	CFLAR (ENSPTIG00000013930) #19	NDUFB3 (ENSPTIG00000013945) #20	HYCC2 (ENSPTIG00000013955) #21	ORC2 (ENSPTIG00000013974) #22	NIF3L1 (ENSPTIG00000013986) #23	PPIL3 (ENSPTIG00000013998) #24	CLK1 (ENSPTIG00000014025) #25	BZW1 (ENSPTIG00000014068) #26	ENSPTIG00000014167 #27	SGO2 (ENSPTIG00000014211) #29	ENSPTIG00000014226 #30
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00950000182891.a.a.a	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00940000154107.b #29	ENSGT00530000064234.k #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
leopard	MODERN SPECIES	115														NDUFB3 (ENSPPRG00000009099) #20	HYCC2 (ENSPPRG00000010091) #21	ORC2 (ENSPPRG00000010416) #22	NIF3L1 (ENSPPRG00000011329) #23	PPIL3 (ENSPPRG00000011604) #24	CLK1 (ENSPPRG00000018038) #25	BZW1 (ENSPPRG00000021144) #26	ENSPPRG00000001179 #27	ENSPPRG00000002911 ##27	SGO2 (ENSPPRG00000003606) #29	KCTD18 (ENSPPRG00000003708) #30	SPATS2L (ENSPPRG00000005755) #31	MAIP1 (ENSPPRG00000005920) #32	TYW5 (ENSPPRG00000005974) #33	C2orf69 (ENSPPRG00000006014) #34	FTCDNL1 (ENSPPRG00000006344) #35	SATB2 (ENSPPRG00000006763) #37	ENSPPRG00000006827
lion	MODERN SPECIES	8	FZD7 (ENSPLOG00000012419) #7	CDK15 (ENSPLOG00000012480) #8	ALS2 (ENSPLOG00000012986) #9	MPP4 (ENSPLOG00000013660) #10	TMEM237 (ENSPLOG00000014799) #11	ENSPLOG00000015067 #12	STRADB (ENSPLOG00000015110) #13	TRAK2 (ENSPLOG00000015326) #15	FLACC1 (ENSPLOG00000015436) #16	CASP8 (ENSPLOG00000015490) #17	ENSPLOG00000015584	CASP10 (ENSPLOG00000015629) #18	CFLAR (ENSPLOG00000015687) #19	NDUFB3 (ENSPLOG00000015772) #20	HYCC2 (ENSPLOG00000015803) #21	ORC2 (ENSPLOG00000015970) #22	NIF3L1 (ENSPLOG00000016032) #23	PPIL3 (ENSPLOG00000016086) #24	CLK1 (ENSPLOG00000016118) #25	BZW1 (ENSPLOG00000016320) #26	ENSPLOG00000016579 #27	SGO2 (ENSPLOG00000016840) #29	KCTD18 (ENSPLOG00000016872) #30	SPATS2L (ENSPLOG00000016944) #31	MAIP1 (ENSPLOG00000010863) #32	TYW5 (ENSPLOG00000010891) #33	C2orf69 (ENSPLOG00000010947) #34	FTCDNL1 (ENSPLOG00000010989) #35	SATB2 (ENSPLOG00000011078) #37	PLCL1 (ENSPLOG00000011340)	ENSPLOG00000011407
Cat	MODERN SPECIES	239	FZD7 (ENSFCAG00000012609) #7	CDK15 (ENSFCAG00000000530) #8	ALS2 (ENSFCAG00000004007) #9	MPP4 (ENSFCAG00000004006) #10	TMEM237 (ENSFCAG00000004003) #11	C2CD6 (ENSFCAG00000009008) #12	ENSFCAG00000050162 #12	STRADB (ENSFCAG00000029023) #13	TRAK2 (ENSFCAG00000006099) #15	FLACC1 (ENSFCAG00000004546) #16	CASP8 (ENSFCAG00000025854) #17	CASP10 (ENSFCAG00000004733) #18	CFLAR (ENSFCAG00000004731) #19	NDUFB3 (ENSFCAG00000029710) #20	HYCC2 (ENSFCAG00000018116) #21	ORC2 (ENSFCAG00000030533) #22	NIF3L1 (ENSFCAG00000041391) #23	PPIL3 (ENSFCAG00000005373) #24	CLK1 (ENSFCAG00000030283) #25	BZW1 (ENSFCAG00000025654) #26	AOX2 (ENSFCAG00000026524) #27	SGO2 (ENSFCAG00000029570) #29	KCTD18 (ENSFCAG00000029212) #30	SPATS2L (ENSFCAG00000007423) #31	ENSFCAG00000032817	PLCL1 (ENSFCAG00000007074)	BOLL (ENSFCAG00000018564)	MARS2 (ENSFCAG00000009491)	RFTN2 (ENSFCAG00000030290)	ENSFCAG00000033723	HSPE1 (ENSFCAG00000014455)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Greater horseshoe bat	MODERN SPECIES	26	FZD7 (ENSRFEG00010015580) #7	CDK15 (ENSRFEG00010015620) #8	ALS2 (ENSRFEG00010016365) #9	MPP4 (ENSRFEG00010016493) #10	TMEM237 (ENSRFEG00010016673) #11	ENSRFEG00010016786 #12	STRADB (ENSRFEG00010016984) #13	TRAK2 (ENSRFEG00010017061) #15	FLACC1 (ENSRFEG00010017170) #16	CASP8 (ENSRFEG00010017380) #17	CASP10 (ENSRFEG00010017431) #18	ENSRFEG00010017455	CFLAR (ENSRFEG00010017495) #19	ENSRFEG00010017622 #20	HYCC2 (ENSRFEG00010017661) #21	ORC2 (ENSRFEG00010017722) #22	NIF3L1 (ENSRFEG00010017775) #23	PPIL3 (ENSRFEG00010017851) #24	CLK1 (ENSRFEG00010017933) #25	BZW1 (ENSRFEG00010018183) #26	ENSRFEG00010018448 #27	ENSRFEG00010019480 ##27	AOX1 (ENSRFEG00010021989) #28	SGO2 (ENSRFEG00010022000) #29	KCTD18 (ENSRFEG00010022002) #30	SPATS2L (ENSRFEG00010022016) #31	MAIP1 (ENSRFEG00010022032) #32	TYW5 (ENSRFEG00010022036) #33	C2orf69 (ENSRFEG00010022039) #34	FTCDNL1 (ENSRFEG00010022040) #35	SATB2 (ENSRFEG00010022046) #37
Microbat	MODERN SPECIES	940	ALS2 (ENSMLUG00000017564) #9	MPP4 (ENSMLUG00000017563) #10	TMEM237 (ENSMLUG00000017562) #11	ENSMLUG00000017559 #12	ENSMLUG00000026061 #12	STRADB (ENSMLUG00000017558) #13	TRAK2 (ENSMLUG00000004915) #15	FLACC1 (ENSMLUG00000015546) #16	CASP8 (ENSMLUG00000015535) #17	ENSMLUG00000030008 #18	ENSMLUG00000022617	CFLAR (ENSMLUG00000005920) #19	ENSMLUG00000028281	NDUFB3 (ENSMLUG00000012878) #20	HYCC2 (ENSMLUG00000012874) #21	ORC2 (ENSMLUG00000001662) #22	NIF3L1 (ENSMLUG00000001658) #23	PPIL3 (ENSMLUG00000013189) #24	CLK1 (ENSMLUG00000000344) #25	BZW1 (ENSMLUG00000001653) #26	ENSMLUG00000022412 #27	ENSMLUG00000027760 ##27	AOX1 (ENSMLUG00000016684) #28	SGO2 (ENSMLUG00000004245) #29	KCTD18 (ENSMLUG00000006605) #30	SPATS2L (ENSMLUG00000006594) #31	MAIP1 (ENSMLUG00000015960) #32	TYW5 (ENSMLUG00000015955) #33	C2orf69 (ENSMLUG00000026751) #34	ENSMLUG00000011411 #35	SATB2 (ENSMLUG00000001554) #37
Megabat	MODERN SPECIES	3475															HYCC2 (ENSPVAG00000008118) #21	ORC2 (ENSPVAG00000008117) #22	NIF3L1 (ENSPVAG00000008116) #23	ENSPVAG00000008114	CLK1 (ENSPVAG00000008112) #25	BZW1 (ENSPVAG00000008111) #26
Equus	ANCESTRAL SPECIES	18	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b.b #28	ENSGT00950000183114.a.b.b.f.b.a #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Donkey	MODERN SPECIES	24	ALS2 (ENSEASG00005002332) #9	MPP4 (ENSEASG00005002081) #10	TMEM237 (ENSEASG00005002051) #11	ENSEASG00005002045 #12	ENSEASG00005023565 #12	STRADB (ENSEASG00005002039) #13	TRAK2 (ENSEASG00005002035) #15	ENSEASG00005024189	FLACC1 (ENSEASG00005036939) #16	CASP8 (ENSEASG00005002028) #17	ENSEASG00005002020	CASP10 (ENSEASG00005002004) #18	CFLAR (ENSEASG00005001994) #19	NDUFB3 (ENSEASG00005034994) #20	HYCC2 (ENSEASG00005001859) #21	ORC2 (ENSEASG00005001457) #22	NIF3L1 (ENSEASG00005001400) #23	CLK1 (ENSEASG00005000996) #25	BZW1 (ENSEASG00005000922) #26	ENSEASG00005021400 #27	ENSEASG00005028089 ##27	ENSEASG00005029204 #27	ENSEASG00005024840 #28	ENSEASG00005027058 #28	SGO2 (ENSEASG00005024538) #29	KCTD18 (ENSEASG00005020042) #30	SPATS2L (ENSEASG00005020050) #31	MAIP1 (ENSEASG00005020067) #32	TYW5 (ENSEASG00005026976) #33	C2orf69 (ENSEASG00005031146) #34	ENSEASG00005020080 #35
Horse	MODERN SPECIES	9	ALS2 (ENSECAG00000009855) #9	MPP4 (ENSECAG00000022800) #10	TMEM237 (ENSECAG00000019645) #11	ENSECAG00000056360	ENSECAG00000044178	C2CD6 (ENSECAG00000029271) #12	STRADB (ENSECAG00000018298) #13	TRAK2 (ENSECAG00000010581) #15	FLACC1 (ENSECAG00000008300) #16	CASP8 (ENSECAG00000005210) #17	ENSECAG00000030369	CASP10 (ENSECAG00000024244) #18	CFLAR (ENSECAG00000021300) #19	NDUFB3 (ENSECAG00000020674) #20	HYCC2 (ENSECAG00000014614) #21	ORC2 (ENSECAG00000009270) #22	NIF3L1 (ENSECAG00000020851) #23	PPIL3 (ENSECAG00000019985) #24	CLK1 (ENSECAG00000015355) #25	BZW1 (ENSECAG00000011768) #26	ENSECAG00000015199 #27	AOX4 (ENSECAG00000024701) ##27	ENSECAG00000032497 ##27	ENSECAG00000058396	ENSECAG00000007830 #28	ENSECAG00000018147 #28	SGO2 (ENSECAG00000006038) #29	KCTD18 (ENSECAG00000001039) #30	SPATS2L (ENSECAG00000018564) #31	MAIP1 (ENSECAG00000050073) #32	TYW5 (ENSECAG00000014128) #33
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Suina	ANCESTRAL SPECIES	3	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.bb #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Chacoan peccary	MODERN SPECIES	91	KIAA2012 (ENSCWAG00000016603)	FZD7 (ENSCWAG00000016583) #7	CDK15 (ENSCWAG00000016217) #8	ALS2 (ENSCWAG00000016152) #9	MPP4 (ENSCWAG00000011738) #10	TMEM237 (ENSCWAG00000011481) #11	ENSCWAG00000011342 #12	STRADB (ENSCWAG00000011261) #13	TRAK2 (ENSCWAG00000011203) #15	FLACC1 (ENSCWAG00000011076) #16	CASP8 (ENSCWAG00000010971) #17	ENSCWAG00000010876 #18	CFLAR (ENSCWAG00000010775) #19	NDUFB3 (ENSCWAG00000010743) #20	HYCC2 (ENSCWAG00000010663) #21	ORC2 (ENSCWAG00000010595) #22	NIF3L1 (ENSCWAG00000010511) #23	PPIL3 (ENSCWAG00000010443) #24	CLK1 (ENSCWAG00000010341) #25	BZW1 (ENSCWAG00000009955) #26	ENSCWAG00000009721 #27	ENSCWAG00000009483 ##27	AOX1 (ENSCWAG00000009210) #28	SGO2 (ENSCWAG00000009111) #29	KCTD18 (ENSCWAG00000009030) #30	SPATS2L (ENSCWAG00000008608) #31	MAIP1 (ENSCWAG00000008554) #32	TYW5 (ENSCWAG00000008494) #33	C2orf69 (ENSCWAG00000008457) #34	FTCDNL1 (ENSCWAG00000008365) #35	SATB2 (ENSCWAG00000008150) #37
Pig	MODERN SPECIES	6	KIAA2012 (ENSSSCG00000016110)	FZD7 (ENSSSCG00000016111) #7	CDK15 (ENSSSCG00000022296) #8	ALS2 (ENSSSCG00000016109) #9	MPP4 (ENSSSCG00000026184) #10	TMEM237 (ENSSSCG00000035161) #11	ENSSSCG00000016107 #12	STRADB (ENSSSCG00000031271) #13	TRAK2 (ENSSSCG00000016104) #15	FLACC1 (ENSSSCG00000016105) #16	CASP8 (ENSSSCG00000028157) #17	CASP10 (ENSSSCG00000026940) #18	CFLAR (ENSSSCG00000016101) #19	ENSSSCG00000016100 #20	HYCC2 (ENSSSCG00000036339) #21	ORC2 (ENSSSCG00000016098) #22	NIF3L1 (ENSSSCG00000039654) #23	PPIL3 (ENSSSCG00000016096) #24	CLK1 (ENSSSCG00000016095) #25	BZW1 (ENSSSCG00000016094) #26	ENSSSCG00000016093 #27	ENSSSCG00000040051 ##27	AOX1 (ENSSSCG00000029606) #28	SGO2 (ENSSSCG00000016092) #29	ENSSSCG00000016091 #30	SPATS2L (ENSSSCG00000016090) #31	MAIP1 (ENSSSCG00000036676) #32	TYW5 (ENSSSCG00000016087) #33	C2orf69 (ENSSSCG00000016086) #34	ENSSSCG00000016085 #35	SATB2 (ENSSSCG00000021657) #37
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00940000159152.d.d	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.i.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00390000012561.b.i.a #26	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00940000159152.d.d	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.i.b #26	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00940000159152.d.d	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.i.b #26	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT01030000235401
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000168691.b	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00940000153311.a.b.a.j.b	ENSGT00390000010316 #20	ENSGT00940000159152.d.d	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.i.b #26	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000154631.c.b	ENSGT00940000158407
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000168691.b	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00940000153311.a.b.a.j.b	ENSGT00390000010316 #20	ENSGT00940000159152.d.d	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.i.b #26	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000154631.c.b	ENSGT00940000158407
Beluga whale	MODERN SPECIES	84	ALS2 (ENSDLEG00000018091) #9	MPP4 (ENSDLEG00000018040) #10	TMEM237 (ENSDLEG00000018013) #11	ENSDLEG00000017999 #12	ENSDLEG00000017990	ENSDLEG00000017981 #12	STRADB (ENSDLEG00000017967) #13	TRAK2 (ENSDLEG00000017933) #15	CASP8 (ENSDLEG00000017912) #17	CASP10 (ENSDLEG00000017886) #18	CFLAR (ENSDLEG00000017824) #19	ENSDLEG00000017810	NDUFB3 (ENSDLEG00000017800) #20	ENSDLEG00000017782	FAM126B (ENSDLEG00000017730) #21	ORC2 (ENSDLEG00000017685) #22	NIF3L1 (ENSDLEG00000017669) #23	PPIL3 (ENSDLEG00000017637) #24	CLK1 (ENSDLEG00000017601) #25	ENSDLEG00000017537 #26	AOX1 (ENSDLEG00000017388) #28	SGO2 (ENSDLEG00000017351) #29	KCTD18 (ENSDLEG00000017330) #30	SPATS2L (ENSDLEG00000017277) #31	MAIP1 (ENSDLEG00000017256) #32	TYW5 (ENSDLEG00000017244) #33	CUNH2orf69 (ENSDLEG00000017234) #34	ENSDLEG00000017202 #35	SATB2 (ENSDLEG00000017180) #37	ENSDLEG00000017147	PLCL1 (ENSDLEG00000017124)
Narwhal	MODERN SPECIES	302	CDK15 (ENSMMNG00015007704) #8	ALS2 (ENSMMNG00015007780) #9	MPP4 (ENSMMNG00015008109) #10	TMEM237 (ENSMMNG00015008418) #11	ENSMMNG00015008486 #12	ENSMMNG00015008548	STRADB (ENSMMNG00015008568) #13	TRAK2 (ENSMMNG00015008594) #15	CASP8 (ENSMMNG00015008620) #17	CASP10 (ENSMMNG00015008635) #18	CFLAR (ENSMMNG00015008658) #19	ENSMMNG00015008677	NDUFB3 (ENSMMNG00015008687) #20	HYCC2 (ENSMMNG00015008700) #21	ENSMMNG00015008710	ORC2 (ENSMMNG00015008727) #22	NIF3L1 (ENSMMNG00015008742) #23	PPIL3 (ENSMMNG00015008752) #24	CLK1 (ENSMMNG00015008783) #25	ENSMMNG00015008840 #26	AOX1 (ENSMMNG00015008883) #28	ENSMMNG00015008917 #29	ENSMMNG00015008923 #29	KCTD18 (ENSMMNG00015008930) #30	SPATS2L (ENSMMNG00015008966) #31	MAIP1 (ENSMMNG00015009034) #32	TYW5 (ENSMMNG00015009041) #33	C2orf69 (ENSMMNG00015009051) #34	FTCDNL1 (ENSMMNG00015009064) #35	SATB2 (ENSMMNG00015009088) #37	ENSMMNG00015009121
Vaquita	MODERN SPECIES	18	ALS2 (ENSPSNG00000014137) #9	MPP4 (ENSPSNG00000014630) #10	TMEM237 (ENSPSNG00000016656) #11	ENSPSNG00000016850 #12	ENSPSNG00000017326	STRADB (ENSPSNG00000017373) #13	TRAK2 (ENSPSNG00000017440) #15	ENSPSNG00000017496 #16	CASP8 (ENSPSNG00000017590) #17	CASP10 (ENSPSNG00000017668) #18	CFLAR (ENSPSNG00000017754) #19	ENSPSNG00000017846	NDUFB3 (ENSPSNG00000017874) #20	ENSPSNG00000017913 #21	ENSPSNG00000017952	ORC2 (ENSPSNG00000017971) #22	NIF3L1 (ENSPSNG00000018036) #23	PPIL3 (ENSPSNG00000018105) #24	CLK1 (ENSPSNG00000018159) #25	ENSPSNG00000018409 #26	AOX1 (ENSPSNG00000018708) #28	SGO2 (ENSPSNG00000018985) #29	KCTD18 (ENSPSNG00000019019) #30	SPATS2L (ENSPSNG00000019081) #31	MAIP1 (ENSPSNG00000019254) #32	TYW5 (ENSPSNG00000019307) #33	C2orf69 (ENSPSNG00000019348) #34	ENSPSNG00000019397 #35	SATB2 (ENSPSNG00000019498) #37	ENSPSNG00000019635	PLCL1 (ENSPSNG00000019688)
Dolphin	MODERN SPECIES	3203																ORC2 (ENSTTRG00000011793) #22	NIF3L1 (ENSTTRG00000011791) #23	ENSTTRG00000011789	CLK1 (ENSTTRG00000011787) #25
Sperm whale	MODERN SPECIES	11	FZD7 (ENSPCTG00005003371) #7	CDK15 (ENSPCTG00005003352) #8	ALS2 (ENSPCTG00005003300) #9	MPP4 (ENSPCTG00005002274) #10	TMEM237 (ENSPCTG00005002055) #11	ENSPCTG00005002043	ENSPCTG00005002017 #12	ENSPCTG00005002007 #13	TRAK2 (ENSPCTG00005001954) #15	CASP8 (ENSPCTG00005001931) #17	CASP10 (ENSPCTG00005001909) #18	CFLAR (ENSPCTG00005001880) #19	NDUFB3 (ENSPCTG00005001863) #20	ENSPCTG00005001851	FAM126B (ENSPCTG00005001830) #21	ORC2 (ENSPCTG00005001802) #22	NIF3L1 (ENSPCTG00005001774) #23	PPIL3 (ENSPCTG00005001749) #24	CLK1 (ENSPCTG00005001575) #25	BZW1 (ENSPCTG00005001498) #26	AOX1 (ENSPCTG00005001418) #28	SGO2 (ENSPCTG00005001385) #29	KCTD18 (ENSPCTG00005001363) #30	SPATS2L (ENSPCTG00005001213) #31	MAIP1 (ENSPCTG00005001167) #32	TYW5 (ENSPCTG00005001148) #33	C2H2orf69 (ENSPCTG00005001135) #34	ENSPCTG00005001114 #35	SATB2 (ENSPCTG00005001020) #37	PLCL1 (ENSPCTG00005000965)	BOLL (ENSPCTG00005000834)
Blue whale	MODERN SPECIES	18	CDK15 (ENSBMSG00010005855) #8	ALS2 (ENSBMSG00010005735) #9	MPP4 (ENSBMSG00010004821) #10	TMEM237 (ENSBMSG00010004486) #11	ENSBMSG00010004401 #12	STRADB (ENSBMSG00010004272) #13	TRAK2 (ENSBMSG00010004246) #15	ENSBMSG00010004235	FLACC1 (ENSBMSG00010004200) #16	CASP8 (ENSBMSG00010004172) #17	CASP10 (ENSBMSG00010004156) #18	CFLAR (ENSBMSG00010004118) #19	ENSBMSG00010004090 #20	ENSBMSG00010004069	HYCC2 (ENSBMSG00010004046) #21	ORC2 (ENSBMSG00010003997) #22	NIF3L1 (ENSBMSG00010003954) #23	PPIL3 (ENSBMSG00010003923) #24	CLK1 (ENSBMSG00010003860) #25	ENSBMSG00010003785 #26	ENSBMSG00010003674 #27	AOX1 (ENSBMSG00010003482) #28	ENSBMSG00010003395 #29	ENSBMSG00010003382 #29	KCTD18 (ENSBMSG00010003365) #30	SPATS2L (ENSBMSG00010003251) #31	MAIP1 (ENSBMSG00010003193) #32	TYW5 (ENSBMSG00010003179) #33	C2orf69 (ENSBMSG00010003167) #34	FTCDNL1 (ENSBMSG00010003148) #35	SATB2 (ENSBMSG00010003076) #37
Pecora	ANCESTRAL SPECIES	16	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Percora_a	ANCESTRAL SPECIES	5	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w #20	ENSGT00390000011295.a #21	ENSGT00910000148331	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493.h #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Rambouillet Sheep	MODERN SPECIES	11	KIAA2012 (ENSOARG00020023194)	FZD7 (ENSOARG00020023182) #7	CDK15 (ENSOARG00020022852) #8	ALS2 (ENSOARG00020022676) #9	MPP4 (ENSOARG00020018870) #10	TMEM237 (ENSOARG00020018644) #11	ENSOARG00020018022 #12	STRADB (ENSOARG00020017965) #13	TRAK2 (ENSOARG00020017672) #15	FLACC1 (ENSOARG00020017518) #16	CASP8 (ENSOARG00020017221) #17	ENSOARG00020017157 #19	NDUFB3 (ENSOARG00020017109) #20	NDUFB3 (ENSOARG00020017061) #20	FAM126B (ENSOARG00020016858) #21	ORC2 (ENSOARG00020016740) #22	NIF3L1 (ENSOARG00020016593) #23	PPIL3 (ENSOARG00020016501) #24	CLK1 (ENSOARG00020016395) #25	BZW1 (ENSOARG00020015764) #26	ENSOARG00020015365 #27	ENSOARG00020015282	ENSOARG00020015070 ##27	AOX1 (ENSOARG00020014833) #28	ENSOARG00020014683 #30	ENSOARG00020014668	SPATS2L (ENSOARG00020014270) #31	MAIP1 (ENSOARG00020014186) #32	TYW5 (ENSOARG00020014145) #33	C2orf69 (ENSOARG00020014115) #34	FTCDNL1 (ENSOARG00020013918) #35
Goat	MODERN SPECIES	11	FZD7 (ENSCHIG00000026310) #7	CDK15 (ENSCHIG00000009588) #8	ALS2 (ENSCHIG00000023750) #9	MPP4 (ENSCHIG00000018210) #10	TMEM237 (ENSCHIG00000025303) #11	ENSCHIG00000024118 #12	STRADB (ENSCHIG00000015673) #13	TRAK2 (ENSCHIG00000026628) #15	FLACC1 (ENSCHIG00000022026) #16	CASP8 (ENSCHIG00000019146) #17	ENSCHIG00000003629	CFLAR (ENSCHIG00000016459) #19	ENSCHIG00000017826	NDUFB3 (ENSCHIG00000022914) #20	HYCC2 (ENSCHIG00000016483) #21	ORC2 (ENSCHIG00000021629) #22	NIF3L1 (ENSCHIG00000009478) #23	PPIL3 (ENSCHIG00000019642) #24	CLK1 (ENSCHIG00000018314) #25	BZW1 (ENSCHIG00000019964) #26	ENSCHIG00000020570 #27	ENSCHIG00000013677 ##27	ENSCHIG00000019390	AOX1 (ENSCHIG00000013439) #28	SGO2 (ENSCHIG00000013638) #29	KCTD18 (ENSCHIG00000022753) #30	SPATS2L (ENSCHIG00000026377) #31	MAIP1 (ENSCHIG00000007507) #32	ENSCHIG00000017324 #33	ENSCHIG00000011016 #34	FTCDNL1 (ENSCHIG00000022126) #35
Bovinae	ANCESTRAL SPECIES	5	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000157458.c	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w.c #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT01010000225408	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35
Bos	ANCESTRAL SPECIES	6	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000157458.c	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w.c #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Bos_a	ANCESTRAL SPECIES	4	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000157458.c	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w.c #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Wild yak	MODERN SPECIES	2503													CFLAR (ENSBMUG00000026584) #19	NDUFB3 (ENSBMUG00000026583) #20	HYCC2 (ENSBMUG00000026580) #21	ORC2 (ENSBMUG00000026579) #22	NIF3L1 (ENSBMUG00000026578) #23	PPIL3 (ENSBMUG00000026577) #24	CLK1 (ENSBMUG00000026576) #25	BZW1 (ENSBMUG00000026575) #26	ENSBMUG00000026574 #27	ENSBMUG00000026573 ##27
Domestic yak	MODERN SPECIES	11	ALS2 (ENSBGRG00000018345) #9	MPP4 (ENSBGRG00000018555) #10	TMEM237 (ENSBGRG00000021384) #11	ENSBGRG00000021802 #12	STRADB (ENSBGRG00000022109) #13	TRAK2 (ENSBGRG00000022201) #15	FLACC1 (ENSBGRG00000022275) #16	ENSBGRG00000022390	CASP8 (ENSBGRG00000022436) #17	ENSBGRG00000022534	ENSBGRG00000022548	CFLAR (ENSBGRG00000022578) #19	ENSBGRG00000022737	ENSBGRG00000022748 #20	HYCC2 (ENSBGRG00000022773) #21	ORC2 (ENSBGRG00000022926) #22	NIF3L1 (ENSBGRG00000022968) #23	ENSBGRG00000023065	CLK1 (ENSBGRG00000023102) #25	BZW1 (ENSBGRG00000023222) #26	ENSBGRG00000023761 #27	ENSBGRG00000026310 ##27	ENSBGRG00000026671	AOX1 (ENSBGRG00000026674) #28	SGO2 (ENSBGRG00000026677) #29	KCTD18 (ENSBGRG00000026680) #30	SPATS2L (ENSBGRG00000026684) #31	MAIP1 (ENSBGRG00000026693) #32	TYW5 (ENSBGRG00000026697) #33	C2orf69 (ENSBGRG00000026703) #34	FTCDNL1 (ENSBGRG00000026708) #35
Bos_b	ANCESTRAL SPECIES	3	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000157458.c	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00530000064199 #19	ENSGT00390000010316.w.c #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Hybrid Bos Indicus	MODERN SPECIES	11	KIAA2012 (ENSBIXG00005031574)	FZD7 (ENSBIXG00005031573) #7	CDK15 (ENSBIXG00005031571) #8	ALS2 (ENSBIXG00005031570) #9	MPP4 (ENSBIXG00005031568) #10	TMEM237 (ENSBIXG00005031567) #11	ENSBIXG00005031566 #12	STRADB (ENSBIXG00005031565) #13	TRAK2 (ENSBIXG00005031564) #15	ENSBIXG00005031563	CASP8 (ENSBIXG00005031562) #17	FLACC1 (ENSBIXG00005031561) #16	CFLAR (ENSBIXG00005031559) #19	ENSBIXG00005031558 #20	HYCC2 (ENSBIXG00005031556) #21	ORC2 (ENSBIXG00005031555) #22	NIF3L1 (ENSBIXG00005031554) #23	PPIL3 (ENSBIXG00005031553) #24	CLK1 (ENSBIXG00005031552) #25	BZW1 (ENSBIXG00005031551) #26	ENSBIXG00005031550 #27	ENSBIXG00005030534 ##27	AOX1 (ENSBIXG00005008599) #28	SGO2 (ENSBIXG00005008643) #29	KCTD18 (ENSBIXG00005005902) #30	ENSBIXG00005008660	SPATS2L (ENSBIXG00005008726) #31	MAIP1 (ENSBIXG00005008787) #32	TYW5 (ENSBIXG00005008805) #33	C2orf69 (ENSBIXG00005008818) #34	FTCDNL1 (ENSBIXG00005008837) #35
Cow	MODERN SPECIES	11	SUMO1 (ENSBTAG00000049402)	KIAA2012 (ENSBTAG00000034192)	FZD7 (ENSBTAG00000002283) #7	CDK15 (ENSBTAG00000055073) #8	ALS2 (ENSBTAG00000007395) #9	MPP4 (ENSBTAG00000052816) #10	TMEM237 (ENSBTAG00000017437) #11	C2CD6 (ENSBTAG00000017436) #12	STRADB (ENSBTAG00000019298) #13	TRAK2 (ENSBTAG00000014933) #15	FLACC1 (ENSBTAG00000012334) #16	CASP8 (ENSBTAG00000015718) #17	CFLAR (ENSBTAG00000010998) #19	NDUFB3 (ENSBTAG00000012760) #20	HYCC2 (ENSBTAG00000021201) #21	ORC2 (ENSBTAG00000031473) #22	NIF3L1 (ENSBTAG00000018282) #23	PPIL3 (ENSBTAG00000005416)	CLK1 (ENSBTAG00000005408) #25	BZW1 (ENSBTAG00000006049) #26	AOX2 (ENSBTAG00000026812) #27	AOX4 (ENSBTAG00000038878) ##27	ENSBTAG00000047849	AOX1 (ENSBTAG00000009725) #28	SGO2 (ENSBTAG00000031579) #29	KCTD18 (ENSBTAG00000002272) #30	SPATS2L (ENSBTAG00000016092) #31	ENSBTAG00000024003	MAIP1 (ENSBTAG00000019231) #32	TYW5 (ENSBTAG00000019232) #33	C2H2orf69 (ENSBTAG00000009952) #34
American bison	MODERN SPECIES	3330	ENSBBBG00000012202	KIAA2012 (ENSBBBG00000002300)	CDK15 (ENSBBBG00000012266) #8	ALS2 (ENSBBBG00000012289) #9	MPP4 (ENSBBBG00000002442) #10	TMEM237 (ENSBBBG00000002465) #11	ENSBBBG00000012811 #12	STRADB (ENSBBBG00000001783) #13	TRAK2 (ENSBBBG00000002490) #15	ENSBBBG00000001771	FLACC1 (ENSBBBG00000012834) #16	CASP8 (ENSBBBG00000012853) #17	CFLAR (ENSBBBG00000012895) #19	ENSBBBG00000002548 #20	HYCC2 (ENSBBBG00000012910) #21	ORC2 (ENSBBBG00000007976) #22	NIF3L1 (ENSBBBG00000012964) #23	PPIL3 (ENSBBBG00000012973) #24	CLK1 (ENSBBBG00000002583) #25	BZW1 (ENSBBBG00000013019) #26	ENSBBBG00000013042 #27	ENSBBBG00000013095 ##27	ENSBBBG00000002631	AOX1 (ENSBBBG00000013130) #28	ENSBBBG00000013142 #29	ENSBBBG00000013146 #29	KCTD18 (ENSBBBG00000013155) #30	ENSBBBG00000013159	SPATS2L (ENSBBBG00000013236) #31	MAIP1 (ENSBBBG00000001643) #32	TYW5 (ENSBBBG00000013257) #33
Siberian musk deer	MODERN SPECIES	351	ENSMMSG00000014944	KIAA2012 (ENSMMSG00000014878)	FZD7 (ENSMMSG00000014860) #7	CDK15 (ENSMMSG00000014595) #8	ALS2 (ENSMMSG00000014494) #9	MPP4 (ENSMMSG00000011618) #10	TMEM237 (ENSMMSG00000011381) #11	STRADB (ENSMMSG00000011336) #13	TRAK2 (ENSMMSG00000011295) #15	FLACC1 (ENSMMSG00000011224) #16	CASP8 (ENSMMSG00000011027) #17	CFLAR (ENSMMSG00000010965) #19	NDUFB3 (ENSMMSG00000010949) #20	HYCC2 (ENSMMSG00000024338) #21	ENSMMSG00000024336	ORC2 (ENSMMSG00000024335) #22	NIF3L1 (ENSMMSG00000024332) #23	PPIL3 (ENSMMSG00000024329) #24	CLK1 (ENSMMSG00000024326) #25	ENSMMSG00000024321 #26	ENSMMSG00000024314 #27	ENSMMSG00000013161 ##27	ENSMMSG00000012463	AOX1 (ENSMMSG00000012371) #28	SGO2 (ENSMMSG00000012334) #29	KCTD18 (ENSMMSG00000012309) #30	SPATS2L (ENSMMSG00000011944) #31	MAIP1 (ENSMMSG00000011886) #32	TYW5 (ENSMMSG00000011859) #33	C2orf69 (ENSMMSG00000011836) #34	ENSMMSG00000011819
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000003665	KIAA2012 (ENSCHYG00000003689)	FZD7 (ENSCHYG00000003728) #7	CDK15 (ENSCHYG00000003776) #8	ALS2 (ENSCHYG00000003878) #9	MPP4 (ENSCHYG00000004046) #10	TMEM237 (ENSCHYG00000004397) #11	C2CD6 (ENSCHYG00000004505) #12	STRADB (ENSCHYG00000004596) #13	TRAK2 (ENSCHYG00000004632) #15	FLACC1 (ENSCHYG00000004659) #16	CASP8 (ENSCHYG00000004683) #17	CFLAR (ENSCHYG00000004722) #19	ENSCHYG00000004767 #20	HYCC2 (ENSCHYG00000004790) #21	ORC2 (ENSCHYG00000004839) #22	NIF3L1 (ENSCHYG00000004879) #23	PPIL3 (ENSCHYG00000004901) #24	CLK1 (ENSCHYG00000004911) #25	ENSCHYG00000004999	BZW1 (ENSCHYG00000009251) #26	ENSCHYG00000009654 #27	ENSCHYG00000009851 ##27	ENSCHYG00000010410	ENSCHYG00000010452	AOX1 (ENSCHYG00000010517) #28	SGO2 (ENSCHYG00000011236) #29	KCTD18 (ENSCHYG00000011325) #30	SPATS2L (ENSCHYG00000011390) #31	ENSCHYG00000011736	MAIP1 (ENSCHYG00000011759) #32
Camelidae	ANCESTRAL SPECIES	58	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Arabian camel	MODERN SPECIES	31	FZD7 (ENSCDRG00005019516) #7	CDK15 (ENSCDRG00005019534) #8	ALS2 (ENSCDRG00005019833) #9	MPP4 (ENSCDRG00005019977) #10	TMEM237 (ENSCDRG00005021415) #11	ENSCDRG00005021425 #12	STRADB (ENSCDRG00005021435) #13	TRAK2 (ENSCDRG00005021447) #15	FLACC1 (ENSCDRG00005006384) #16	CASP8 (ENSCDRG00005006441) #17	CASP10 (ENSCDRG00005006612) #18	ENSCDRG00005006679	CFLAR (ENSCDRG00005006763) #19	ENSCDRG00005006864 #20	HYCC2 (ENSCDRG00005006918) #21	ORC2 (ENSCDRG00005007036) #22	NIF3L1 (ENSCDRG00005007147) #23	PPIL3 (ENSCDRG00005007234) #24	CLK1 (ENSCDRG00005007272) #25	BZW1 (ENSCDRG00005008038) #26	ENSCDRG00005008482 #27	ENSCDRG00005008740 ##27	AOX1 (ENSCDRG00005009121) #28	ENSCDRG00005009409 #29	ENSCDRG00005009460 #29	KCTD18 (ENSCDRG00005009496) #30	SPATS2L (ENSCDRG00005009592) #31	ENSCDRG00005010296	MAIP1 (ENSCDRG00005010319) #32	TYW5 (ENSCDRG00005010376) #33	C2orf69 (ENSCDRG00005010427) #34
Alpaca	MODERN SPECIES	3021	ENSVPAG00000006706	FZD7 (ENSVPAG00000006705) #7	CDK15 (ENSVPAG00000006704) #8	ALS2 (ENSVPAG00000006703) #9	ENSVPAG00000006696 #10	TMEM237 (ENSVPAG00000006695) #11	ENSVPAG00000006694 #12	ENSVPAG00000006693 #13	TRAK2 (ENSVPAG00000006692) #15	ENSVPAG00000006691 #16	CASP8 (ENSVPAG00000006690) #17	CASP10 (ENSVPAG00000006689) #18	CFLAR (ENSVPAG00000006687) #19	NDUFB3 (ENSVPAG00000006686) #20	HYCC2 (ENSVPAG00000006685) #21	ORC2 (ENSVPAG00000006684) #22	NIF3L1 (ENSVPAG00000006683) #23	ENSVPAG00000006681	CLK1 (ENSVPAG00000006678) #25	BZW1 (ENSVPAG00000006677) #26
Eulipotyphla	ANCESTRAL SPECIES	268															ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579
Common shrew	MODERN SPECIES	1225															HYCC2 (ENSSARG00000010220) #21	ORC2 (ENSSARG00000010200) #22	ENSSARG00000010184 #23	ENSSARG00000010176
Hedgehog	MODERN SPECIES	1772																ORC2 (ENSEEUG00000009597) #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Xenarthra	ANCESTRAL SPECIES	28	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Sloth	MODERN SPECIES	1496																ENSCHOG00000007580 #22
Armadillo	MODERN SPECIES	1606	FZD7 (ENSDNOG00000041349) #7	CDK15 (ENSDNOG00000007655) #8	ALS2 (ENSDNOG00000002128) #9	MPP4 (ENSDNOG00000002127) #10	ENSDNOG00000002126 #11	ENSDNOG00000003786 #12	ENSDNOG00000047748 #12	STRADB (ENSDNOG00000003778) #13	ENSDNOG00000036495 #15	FLACC1 (ENSDNOG00000014593) #16	CASP8 (ENSDNOG00000035172) #17	CASP10 (ENSDNOG00000013716) #18	CFLAR (ENSDNOG00000018748) #19	NDUFB3 (ENSDNOG00000036366) #20	ENSDNOG00000007984 #21	ORC2 (ENSDNOG00000001397) #22	NIF3L1 (ENSDNOG00000042985) #23	PPIL3 (ENSDNOG00000039120) #24	CLK1 (ENSDNOG00000007543) #25	ENSDNOG00000044684 #27	ENSDNOG00000045945 ##27	AOX1 (ENSDNOG00000017910) #28	SGO2 (ENSDNOG00000041594) #29	KCTD18 (ENSDNOG00000033036) #30	SPATS2L (ENSDNOG00000011539) #31	MAIP1 (ENSDNOG00000031166) #32	TYW5 (ENSDNOG00000016467) #33	C2orf69 (ENSDNOG00000031567) #34	ENSDNOG00000031405 #35	SATB2 (ENSDNOG00000001292) #37	ENSDNOG00000039662
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319.a #17	ENSGT00940000160319.b #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319.a #17	ENSGT00940000160319.b #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00950000183114.a.b.b.f.a.a ##27	ENSGT00950000183114.a.b.b.f.b #28	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Elephant	MODERN SPECIES	301	MPP4 (ENSLAFG00000011943) #10	TMEM237 (ENSLAFG00000011936) #11	ENSLAFG00000014846 #12	ENSLAFG00000030241 #12	ENSLAFG00000027906 #12	STRADB (ENSLAFG00000014838) #13	TRAK2 (ENSLAFG00000026814) #15	FLACC1 (ENSLAFG00000018288) #16	CASP8 (ENSLAFG00000018282) #17	ENSLAFG00000032402 #17	ENSLAFG00000025656 #18	ENSLAFG00000002296 #18	CFLAR (ENSLAFG00000021855) #19	NDUFB3 (ENSLAFG00000011365) #20	HYCC2 (ENSLAFG00000009899) #21	ORC2 (ENSLAFG00000022430) #22	NIF3L1 (ENSLAFG00000009897) #23	ENSLAFG00000009894	CLK1 (ENSLAFG00000009891) #25	BZW1 (ENSLAFG00000009883) #26	ENSLAFG00000026161 #27	ENSLAFG00000028503 ##27	AOX1 (ENSLAFG00000007070) #28	SGO2 (ENSLAFG00000028451) #29	KCTD18 (ENSLAFG00000003281) #30	SPATS2L (ENSLAFG00000001437) #31	MAIP1 (ENSLAFG00000011639) #32	TYW5 (ENSLAFG00000018708) #33	C2orf69 (ENSLAFG00000018707) #34	ENSLAFG00000030925 #35	SATB2 (ENSLAFG00000002924) #37
Hyrax	MODERN SPECIES	623															HYCC2 (ENSPCAG00000006003) #21	ORC2 (ENSPCAG00000005851) #22	NIF3L1 (ENSPCAG00000005810) #23	ENSPCAG00000005770	CLK1 (ENSPCAG00000005649) #25
Tenrec	MODERN SPECIES	8944																ENSETEG00000007281 #22	NIF3L1 (ENSETEG00000007279) #23
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.a.a #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a	ENSGT00940000153655.A.a	ENSGT00390000015682	ENSGT00940000158961	ENSGT00390000006051	ENSGT00390000016051.bb.a	ENSGT00940000159552
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209.a #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.a.a #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a	ENSGT00940000153655.A.a	ENSGT00390000015682	ENSGT00940000158961	ENSGT00390000006051.d.a	ENSGT00390000016051.bb.a	ENSGT00390000016051.cb
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209.a #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.a.a #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a	ENSGT00390000015682	ENSGT00940000158961	ENSGT00390000006051.d.a	ENSGT00390000016051.bb.a	ENSGT00940000159552	ENSGT00390000012569.b
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209.a #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.e #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b.a.a #26	ENSGT00950000183114.a.b.b.f.a.b #27	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a	ENSGT00390000015682	ENSGT00940000158961	ENSGT00390000006051.d.a	ENSGT00390000016051.bb.a.a	ENSGT00940000159552	ENSGT00390000012569.b
Common wonbat	MODERN SPECIES	1038	CDK15 (ENSVURG00010006676) #8	ALS2 (ENSVURG00010006744) #9	MPP4 (ENSVURG00010006829) #10	TMEM237 (ENSVURG00010008490) #11	ENSVURG00010008599 #12	ENSVURG00010008610 #12	STRADB (ENSVURG00010008621) #13	TRAK2 (ENSVURG00010008653) #15	CASP8 (ENSVURG00010008700) #17	ENSVURG00010008722	ENSVURG00010008731 #18	CFLAR (ENSVURG00010008748) #19	ENSVURG00010008758 #20	ENSVURG00010008768	HYCC2 (ENSVURG00010008776) #21	ORC2 (ENSVURG00010008787) #22	NIF3L1 (ENSVURG00010008841) #23	ENSVURG00010008852	CLK1 (ENSVURG00010008863) #25	ENSVURG00010008907 #26	ENSVURG00010009007 #27	CPB2 (ENSVURG00010009039)	ZC3H13 (ENSVURG00010009067)	SIAH3 (ENSVURG00010009121)	CBY2 (ENSVURG00010009129)	COG3 (ENSVURG00010009151)	SLC25A30 (ENSVURG00010009204)	ENSVURG00010009218	ENSVURG00010009253	KCTD4 (ENSVURG00010009263)	ENSVURG00010009277
koala	MODERN SPECIES	7	ENSPCIG00000008846	FZD7 (ENSPCIG00000008847) #7	CDK15 (ENSPCIG00000008848) #8	ALS2 (ENSPCIG00000031642) #9	MPP4 (ENSPCIG00000012099) #10	TMEM237 (ENSPCIG00000012085) #11	ENSPCIG00000035941 #12	STRADB (ENSPCIG00000019067) #13	TRAK2 (ENSPCIG00000019074) #15	ENSPCIG00000019085 #16	CASP8 (ENSPCIG00000019107) #17	ENSPCIG00000019109 #18	CFLAR (ENSPCIG00000019111) #19	ENSPCIG00000019113 #20	HYCC2 (ENSPCIG00000019013) #21	ORC2 (ENSPCIG00000034597) #22	NIF3L1 (ENSPCIG00000019334) #23	PPIL3 (ENSPCIG00000019339) #24	CLK1 (ENSPCIG00000019466) #25	BZW1 (ENSPCIG00000019483) #26	ENSPCIG00000019812 #27	CPB2 (ENSPCIG00000029518)	ZC3H13 (ENSPCIG00000029529)	SIAH3 (ENSPCIG00000035020)	CBY2 (ENSPCIG00000032716)	COG3 (ENSPCIG00000029554)	SLC25A30 (ENSPCIG00000029561)	ENSPCIG00000029567	ENSPCIG00000029578	KCTD4 (ENSPCIG00000029586)	ENSPCIG00000029588
Wallaby	MODERN SPECIES	2488																ORC2 (ENSMEUG00000005184) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000012030	FZD7 (ENSSHAG00000012997) #7	CDK15 (ENSSHAG00000013964) #8	ALS2 (ENSSHAG00000014644) #9	MPP4 (ENSSHAG00000014864) #10	TMEM237 (ENSSHAG00000015037) #11	ENSSHAG00000023780 #12	STRADB (ENSSHAG00000030376) #13	TRAK2 (ENSSHAG00000024925) #15	ENSSHAG00000023296 #16	CASP8 (ENSSHAG00000000760) #17	ENSSHAG00000021117 #18	CFLAR (ENSSHAG00000013869) #19	NDUFB3 (ENSSHAG00000013520) #20	HYCC2 (ENSSHAG00000013139) #21	ORC2 (ENSSHAG00000012779) #22	NIF3L1 (ENSSHAG00000012698) #23	ENSSHAG00000025622	CLK1 (ENSSHAG00000012465) #25	ENSSHAG00000012368 #26	ENSSHAG00000011752 #27	ENSSHAG00000011001	ZC3H13 (ENSSHAG00000010568)	SIAH3 (ENSSHAG00000008837)	CBY2 (ENSSHAG00000008208)	ENSSHAG00000005964	COG3 (ENSSHAG00000005057)	ENSSHAG00000003644	ENSSHAG00000001545	ENSSHAG00000031130	KCTD4 (ENSSHAG00000025523)
Opossum	MODERN SPECIES	6	STK11IP (ENSMODG00000015058)	SLC4A3 (ENSMODG00000015043)	TMEM237 (ENSMODG00000015258) #11	ENSMODG00000028124	ENSMODG00000015219 #12	STRADB (ENSMODG00000015216) #13	TRAK2 (ENSMODG00000015207) #15	ENSMODG00000015188 #16	CASP8 (ENSMODG00000015183) #17	ENSMODG00000029656	ENSMODG00000015106 #18	ENSMODG00000015097 #19	ENSMODG00000015090 #20	ENSMODG00000037238	HYCC2 (ENSMODG00000015086) #21	ORC2 (ENSMODG00000015068) #22	NIF3L1 (ENSMODG00000015056) #23	ENSMODG00000015037	CLK1 (ENSMODG00000015025) #25	ENSMODG00000015000 #26	AOX2 (ENSMODG00000014990) #27	CPB2 (ENSMODG00000014975)	ZC3H13 (ENSMODG00000014969)	SIAH3 (ENSMODG00000014958)	CBY2 (ENSMODG00000014955)	COG3 (ENSMODG00000014952)	SLC25A30 (ENSMODG00000014945)	ENSMODG00000014940	KCTD4 (ENSMODG00000024944)	ENSMODG00000029120	ENSMODG00000025484
Platypus	MODERN SPECIES	18	CDK15 (ENSOANG00000022134) #8	ALS2 (ENSOANG00000001687) #9	ENSOANG00000044570 #10	TMEM237 (ENSOANG00000003258) #11	ENSOANG00000046860 #12	STRADB (ENSOANG00000009606) #13	TRAK2 (ENSOANG00000046700) #15	ENSOANG00000038444 #16	CASP8 (ENSOANG00000004013) #17	ENSOANG00000036261	ENSOANG00000000674	ENSOANG00000003495 #18	ENSOANG00000045194 #19	NDUFB3 (ENSOANG00000036170) #20	HYCC2 (ENSOANG00000044954) #21	ORC2 (ENSOANG00000010096) #22	NIF3L1 (ENSOANG00000010095) #23	ENSOANG00000008065	CLK1 (ENSOANG00000012539) #25	BZW1 (ENSOANG00000010824) #26	ENSOANG00000049296 ##27	ENSOANG00000044935 #29	ENSOANG00000045688 #31	ENSOANG00000036911 #32	TYW5 (ENSOANG00000040342) #33	ENSOANG00000002096 #34	SATB2 (ENSOANG00000039784) #37	PLCL1 (ENSOANG00000044001)	BOLL (ENSOANG00000019928)	RFTN2 (ENSOANG00000020014)	MOB4 (ENSOANG00000044127)
Sauria	ANCESTRAL SPECIES	32	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00390000004840	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00390000004840	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37
Laterata	ANCESTRAL SPECIES	42	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00950000183314	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT01030000235401
Common wall lizard	MODERN SPECIES		ENSPMRG00000003585	ENSPMRG00000003588	ENSPMRG00000000092	ENSPMRG00000000103	SLC39A10 (ENSPMRG00000000128)	DNAH7 (ENSPMRG00000000850)	STK17B (ENSPMRG00000002154)	HECW2 (ENSPMRG00000002235)	ENSPMRG00000002791	TMEM237 (ENSPMRG00000002802) #11	STRADB (ENSPMRG00000002816) #13	TRAK2 (ENSPMRG00000002830) #15	CFLAR (ENSPMRG00000002844) #19	NDUFB3 (ENSPMRG00000002852) #20	HYCC2 (ENSPMRG00000002860) #21	ORC2 (ENSPMRG00000002871) #22	NIF3L1 (ENSPMRG00000002889) #23	PPIL3 (ENSPMRG00000002900) #24	CLK1 (ENSPMRG00000002909) #25	BZW1 (ENSPMRG00000002917) #26	ENSPMRG00000003375 #27	ENSPMRG00000005111	ENSPMRG00000005124 #27	KCTD18 (ENSPMRG00000005144) #30	SPATS2L (ENSPMRG00000005149) #31	ENSPMRG00000005158	MAIP1 (ENSPMRG00000005161) #32	TYW5 (ENSPMRG00000005165) #33	C2orf69 (ENSPMRG00000005171) #34	FTCDNL1 (ENSPMRG00000005176) #35	SATB2 (ENSPMRG00000005180) #37
Argentine black and white tegu	MODERN SPECIES	12	NAB1 (ENSSMRG00000019867)	GLS (ENSSMRG00000019868)	STAT1 (ENSSMRG00000019870)	STAT4 (ENSSMRG00000019871)	MYO1B (ENSSMRG00000019872)	ENSSMRG00000019873	ENSSMRG00000019874	NABP1 (ENSSMRG00000019876)	CAVIN2 (ENSSMRG00000019877)	TMEFF2 (ENSSMRG00000019878)	ENSSMRG00000019880	ENSSMRG00000019884	DNAH7 (ENSSMRG00000019885)	ENSSMRG00000020015 #20	HYCC2 (ENSSMRG00000020016) #21	ORC2 (ENSSMRG00000020017) #22	NIF3L1 (ENSSMRG00000020018) #23	PPIL3 (ENSSMRG00000020020) #24	MKS1 (ENSSMRG00000020026)	ENSSMRG00000020027	CLK1 (ENSSMRG00000020029) #25	BZW1 (ENSSMRG00000020030) #26	ENSSMRG00000020046 #27	ENSSMRG00000020241 #27	KCTD18 (ENSSMRG00000020242) #30	SPATS2L (ENSSMRG00000020243) #31	MAIP1 (ENSSMRG00000020245) #32	TYW5 (ENSSMRG00000020247) #33	C2orf69 (ENSSMRG00000020249) #34	FTCDNL1 (ENSSMRG00000020252) #35	SATB2 (ENSSMRG00000020256) #37
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Elapidae	ANCESTRAL SPECIES		ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160994 #18	ENSGT00530000064199.k #19	ENSGT00530000064199.l #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Eastern brown snake	MODERN SPECIES	7	BMPR2 (ENSPTXG00000001478)	NOP58 (ENSPTXG00000001936)	SUMO1 (ENSPTXG00000001946)	FZD7 (ENSPTXG00000001949) #7	CDK15 (ENSPTXG00000001951) #8	ALS2 (ENSPTXG00000001954) #9	MPP4 (ENSPTXG00000001960) #10	TMEM237 (ENSPTXG00000002623) #11	STRADB (ENSPTXG00000002626) #13	TRAK2 (ENSPTXG00000002629) #15	CASP10 (ENSPTXG00000002635) #18	ENSPTXG00000002638 #19	ENSPTXG00000002639 #19	NDUFB3 (ENSPTXG00000002643) #20	HYCC2 (ENSPTXG00000002649) #21	ORC2 (ENSPTXG00000002651) #22	NIF3L1 (ENSPTXG00000002654) #23	ENSPTXG00000002657	CLK1 (ENSPTXG00000002661) #25	BZW1 (ENSPTXG00000002667) #26	AOX1 (ENSPTXG00000002704) #27	KCTD18 (ENSPTXG00000004060) #30	SPATS2L (ENSPTXG00000004073) #31	MAIP1 (ENSPTXG00000004416) #32	TYW5 (ENSPTXG00000004418) #33	C2orf69 (ENSPTXG00000004419) #34	ENSPTXG00000004420 #37	ENSPTXG00000004422	PLCL1 (ENSPTXG00000004423)	BOLL (ENSPTXG00000004425)	RFTN2 (ENSPTXG00000004427)
Mainland tiger snake	MODERN SPECIES	21												ENSNSUG00000013078 #19	ENSNSUG00000013079 #19	NDUFB3 (ENSNSUG00000013082) #20	HYCC2 (ENSNSUG00000013085) #21	ORC2 (ENSNSUG00000013192) #22	NIF3L1 (ENSNSUG00000013193) #23	ENSNSUG00000013194	CLK1 (ENSNSUG00000013195) #25	BZW1 (ENSNSUG00000013196) #26	AOX1 (ENSNSUG00000013197) #27	KCTD18 (ENSNSUG00000013750) #30	SPATS2L (ENSNSUG00000013759) #31	MAIP1 (ENSNSUG00000013760) #32	TYW5 (ENSNSUG00000013761) #33	C2orf69 (ENSNSUG00000013762) #34	SATB2 (ENSNSUG00000013763) #37	PLCL1 (ENSNSUG00000013764)	BOLL (ENSNSUG00000013765)	RFTN2 (ENSNSUG00000013801)	MOB4 (ENSNSUG00000013835)
Blue-lipped sea krait	MODERN SPECIES	7611															HYCC2 (ENSLLTG00000004998) #21	ORC2 (ENSLLTG00000005066) #22
Indian cobra	MODERN SPECIES		BMPR2 (ENSNNAG00000008749)	NOP58 (ENSNNAG00000008788)	SUMO1 (ENSNNAG00000008916)	ENSNNAG00000008934	FZD7 (ENSNNAG00000008987) #7	CDK15 (ENSNNAG00000009009) #8	ENSNNAG00000009075 #9	MPP4 (ENSNNAG00000009104) #10	TMEM237 (ENSNNAG00000009398) #11	STRADB (ENSNNAG00000009431) #13	TRAK2 (ENSNNAG00000009496) #15	CASP10 (ENSNNAG00000009584) #18	CFLAR (ENSNNAG00000009607) #19	NDUFB3 (ENSNNAG00000009702) #20	HYCC2 (ENSNNAG00000009742) #21	ORC2 (ENSNNAG00000009852) #22	NIF3L1 (ENSNNAG00000009910) #23	ENSNNAG00000009941	CLK1 (ENSNNAG00000009956) #25	BZW1 (ENSNNAG00000010016) #26	AOX1 (ENSNNAG00000010279) #27	KCTD18 (ENSNNAG00000014023) #30	SPATS2L (ENSNNAG00000014040) #31	MAIP1 (ENSNNAG00000014058) #32	TYW5 (ENSNNAG00000014077) #33	C2orf69 (ENSNNAG00000006692) #34	ENSNNAG00000006700 #37	ENSNNAG00000006717 #37	PLCL1 (ENSNNAG00000006743)	BOLL (ENSNNAG00000006909)	RFTN2 (ENSNNAG00000006926)
Lizard	MODERN SPECIES	1090				CDK15 (ENSACAG00000000560) #8	ALS2 (ENSACAG00000000724) #9	ENSACAG00000001108 #10	TMEM237 (ENSACAG00000001296) #11	ENSACAG00000036505 #12	STRADB (ENSACAG00000001347) #13	TRAK2 (ENSACAG00000001412) #15	CASP10 (ENSACAG00000001713) #18	CFLAR (ENSACAG00000001747) #19	ENSACAG00000041240	NDUFB3 (ENSACAG00000001777) #20	HYCC2 (ENSACAG00000001779) #21	ORC2 (ENSACAG00000001915) #22
tuatara	MODERN SPECIES	1814	CDK15 (ENSSPUG00000004232) #8	ENSSPUG00000004156	ALS2 (ENSSPUG00000003853) #9	MPP4 (ENSSPUG00000003567) #10	TMEM237 (ENSSPUG00000003502) #11	ENSSPUG00000003484 #12	STRADB (ENSSPUG00000003477) #13	TRAK2 (ENSSPUG00000003462) #15	ENSSPUG00000003445 #17	ENSSPUG00000003440	ENSSPUG00000003434 #17	CASP10 (ENSSPUG00000003417) #18	CFLAR (ENSSPUG00000003396) #19	NDUFB3 (ENSSPUG00000003387) #20	HYCC2 (ENSSPUG00000003211) #21	ORC2 (ENSSPUG00000003152) #22	NIF3L1 (ENSSPUG00000003130) #23	PPIL3 (ENSSPUG00000003113) #24	CLK1 (ENSSPUG00000003057) #25	BZW1 (ENSSPUG00000003041) #26	ENSSPUG00000002295 #27	ENSSPUG00000001860 #27	ENSSPUG00000001654 #27	KCTD18 (ENSSPUG00000001600) #30	ENSSPUG00000001587	SPATS2L (ENSSPUG00000001564) #31	MAIP1 (ENSSPUG00000001474) #32	TYW5 (ENSSPUG00000001453) #33	C2orf69 (ENSSPUG00000001446) #34	FTCDNL1 (ENSSPUG00000001397) #35	SATB2 (ENSSPUG00000001263) #37
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Aves	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994.m #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994.m #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Chicken	MODERN SPECIES	36	NOP58 (ENSGALG00010025157)	SUMO1 (ENSGALG00010025131)	FZD7 (ENSGALG00010026264) #7	CDK15 (ENSGALG00010025071) #8	ALS2 (ENSGALG00010025055) #9	MPP4 (ENSGALG00010024947) #10	TMEM237 (ENSGALG00010024930) #11	STRADB (ENSGALG00010024921) #13	TRAK2 (ENSGALG00010024917) #15	CASP8 (ENSGALG00010024903) #17	CASP18 (ENSGALG00010024887)	CASP10 (ENSGALG00010024881) #18	CFLAR (ENSGALG00010024876) #19	NDUFB3 (ENSGALG00010024869) #20	HYCC2 (ENSGALG00010024845) #21	ORC2 (ENSGALG00010024830) #22	NIF3L1 (ENSGALG00010024811) #23	PPIL3 (ENSGALG00010024807) #24	CLK1 (ENSGALG00010024803) #25	BZW1 (ENSGALG00010024792) #26	AOX2 (ENSGALG00010024771) #27	AOX1 (ENSGALG00010024731) #27	ENSGALG00010024213 #29	KCTD18 (ENSGALG00010024207) #30	SPATS2L (ENSGALG00010024075) #31	MAIP1 (ENSGALG00010024020) #32	TYW5 (ENSGALG00010023968) #33	C2orf69 (ENSGALG00010023884) #34	SATB2 (ENSGALG00010023831) #37	PLCL1 (ENSGALG00010015218)	BOLL (ENSGALG00010015152)
Turkey	MODERN SPECIES	27	SUMO1 (ENSMGAG00000017685)	FZD7 (ENSMGAG00000008142) #7	CDK15 (ENSMGAG00000008119) #8	ENSMGAG00000017624 #9	ENSMGAG00000008034 #9	MPP4 (ENSMGAG00000007983) #10	TMEM237 (ENSMGAG00000007970) #11	STRADB (ENSMGAG00000007934) #13	TRAK2 (ENSMGAG00000007874) #15	CASP8 (ENSMGAG00000007846) #17	ENSMGAG00000007834	CASP10 (ENSMGAG00000007806) #18	CFLAR (ENSMGAG00000007778) #19	NDUFB3 (ENSMGAG00000007771) #20	HYCC2 (ENSMGAG00000007746) #21	ORC2 (ENSMGAG00000007673) #22	NIF3L1 (ENSMGAG00000007653) #23	PPIL3 (ENSMGAG00000007648) #24	CLK1 (ENSMGAG00000007598) #25	BZW1 (ENSMGAG00000007562) #26	ENSMGAG00000020945 #27	AOX1 (ENSMGAG00000007252) #27	ENSMGAG00000007247 #29	ENSMGAG00000007215 #30	ENSMGAG00000021622 #30	SPATS2L (ENSMGAG00000007229) #31	MAIP1 (ENSMGAG00000007211) #32	TYW5 (ENSMGAG00000007194) #33	C2orf69 (ENSMGAG00000007191) #34	SATB2 (ENSMGAG00000007173) #37	ENSMGAG00000007167
Japanese quail	MODERN SPECIES	25	ENSCJPG00005015329	FZD7 (ENSCJPG00005015328) #7	CDK15 (ENSCJPG00005015326) #8	ALS2 (ENSCJPG00005015296) #9	MPP4 (ENSCJPG00005015295) #10	TMEM237 (ENSCJPG00005015294) #11	STRADB (ENSCJPG00005015293) #13	TRAK2 (ENSCJPG00005015247) #15	CASP8 (ENSCJPG00005015246) #17	ENSCJPG00005015245	ENSCJPG00005015244 #18	ENSCJPG00005015243 #18	CFLAR (ENSCJPG00005015242) #19	NDUFB3 (ENSCJPG00005015241) #20	HYCC2 (ENSCJPG00005015237) #21	ORC2 (ENSCJPG00005015236) #22	PPIL3 (ENSCJPG00005015235) #24	NIF3L1 (ENSCJPG00005015111) #23	CLK1 (ENSCJPG00005015110) #25	BZW1 (ENSCJPG00005015109) #26	AOX1 (ENSCJPG00005014163) #27	KCTD18 (ENSCJPG00005014162) #30	SPATS2L (ENSCJPG00005014161) #31	ENSCJPG00005014159 #32	TYW5 (ENSCJPG00005014158) #33	C2orf69 (ENSCJPG00005014157) #34	SATB2 (ENSCJPG00005014156) #37	PLCL1 (ENSCJPG00005014151)	BOLL (ENSCJPG00005014150)	RFTN2 (ENSCJPG00005014149)	MOB4 (ENSCJPG00005014148)
Anatidae	ANCESTRAL SPECIES	10								ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Pink-footed goose	MODERN SPECIES	397								STRADB (ENSABRG00000013445) #13	TRAK2 (ENSABRG00000013455) #15	CASP8 (ENSABRG00000013517) #17	ENSABRG00000013528	CASP10 (ENSABRG00000013541) #18	CFLAR (ENSABRG00000013548) #19	NDUFB3 (ENSABRG00000013553) #20	HYCC2 (ENSABRG00000013562) #21	ORC2 (ENSABRG00000013617) #22	NIF3L1 (ENSABRG00000013667) #23	PPIL3 (ENSABRG00000013682) #24	CLK1 (ENSABRG00000013756) #25	BZW1 (ENSABRG00000014423) #26
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a
Golden eagle	MODERN SPECIES	22	NOP58 (ENSACCG00020003127)	SUMO1 (ENSACCG00020003114)	FZD7 (ENSACCG00020003104) #7	CDK15 (ENSACCG00020003085) #8	ALS2 (ENSACCG00020003034) #9	MPP4 (ENSACCG00020002955) #10	TMEM237 (ENSACCG00020002868) #11	STRADB (ENSACCG00020002846) #13	TRAK2 (ENSACCG00020002810) #15	CASP8 (ENSACCG00020002787) #17	ENSACCG00020002772	CASP10 (ENSACCG00020002753) #18	CFLAR (ENSACCG00020002739) #19	NDUFB3 (ENSACCG00020002722) #20	HYCC2 (ENSACCG00020002702) #21	ORC2 (ENSACCG00020002685) #22	NIF3L1 (ENSACCG00020002663) #23	ENSACCG00020002651	CLK1 (ENSACCG00020002621) #25	BZW1 (ENSACCG00020002605) #26	ENSACCG00020002563 #27	ENSACCG00020002495 #27	KCTD18 (ENSACCG00020002434) #30	SPATS2L (ENSACCG00020002416) #31	MAIP1 (ENSACCG00020002401) #32	TYW5 (ENSACCG00020002393) #33	C2orf69 (ENSACCG00020002380) #34	SATB2 (ENSACCG00020002371) #37	PLCL1 (ENSACCG00020002350)	BOLL (ENSACCG00020002330)	RFTN2 (ENSACCG00020002295)
Kakapo	MODERN SPECIES	22	SUMO1 (ENSSHBG00005000263)	FZD7 (ENSSHBG00005000260) #7	CDK15 (ENSSHBG00005000256) #8	ALS2 (ENSSHBG00005000252) #9	ENSSHBG00005000246	MPP4 (ENSSHBG00005000222) #10	TMEM237 (ENSSHBG00005000210) #11	STRADB (ENSSHBG00005000206) #13	TRAK2 (ENSSHBG00005000199) #15	CASP8 (ENSSHBG00005000189) #17	ENSSHBG00005000177	ENSSHBG00005021047	CASP10 (ENSSHBG00005021045) #18	NDUFB3 (ENSSHBG00005021043) #20	HYCC2 (ENSSHBG00005021042) #21	ORC2 (ENSSHBG00005021041) #22	NIF3L1 (ENSSHBG00005021038) #23	PPIL3 (ENSSHBG00005021034) #24	CLK1 (ENSSHBG00005021033) #25	BZW1 (ENSSHBG00005021029) #26	ENSSHBG00005020922 #27	ENSSHBG00005019636 #27	KCTD18 (ENSSHBG00005019425) #30	SPATS2L (ENSSHBG00005019422) #31	MAIP1 (ENSSHBG00005019417) #32	TYW5 (ENSSHBG00005019414) #33	C2orf69 (ENSSHBG00005019413) #34	SATB2 (ENSSHBG00005019410) #37	PLCL1 (ENSSHBG00005019405)	BOLL (ENSSHBG00005019392)	RFTN2 (ENSSHBG00005019386)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000163579	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Great tit	MODERN SPECIES	27	NOP58 (ENSPMJG00000018230)	SUMO1 (ENSPMJG00000018227)	FZD7 (ENSPMJG00000018222) #7	CDK15 (ENSPMJG00000018220) #8	ALS2 (ENSPMJG00000018217) #9	MPP4 (ENSPMJG00000018190) #10	TMEM237 (ENSPMJG00000018188) #11	STRADB (ENSPMJG00000018187) #13	TRAK2 (ENSPMJG00000018184) #15	CASP8 (ENSPMJG00000018179) #17	ENSPMJG00000018178	CASP10 (ENSPMJG00000018177) #18	CFLAR (ENSPMJG00000018176) #19	NDUFB3 (ENSPMJG00000018175) #20	HYCC2 (ENSPMJG00000018174) #21	ORC2 (ENSPMJG00000018173) #22	NIF3L1 (ENSPMJG00000018172) #23	ENSPMJG00000018171	BZW1 (ENSPMJG00000018170) #26	AOX1 (ENSPMJG00000004145) #27	ENSPMJG00000004063	SPATS2L (ENSPMJG00000004053) #31	MAIP1 (ENSPMJG00000004020) #32	TYW5 (ENSPMJG00000004013) #33	C2orf69 (ENSPMJG00000004011) #34	SATB2 (ENSPMJG00000004001) #37	PLCL1 (ENSPMJG00000003985)	BOLL (ENSPMJG00000003966)	RFTN2 (ENSPMJG00000003955)	MOB4 (ENSPMJG00000003952)	HSPE1 (ENSPMJG00000003948)
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Flycatcher	MODERN SPECIES	26	NOP58 (ENSFALG00000004052)	SUMO1 (ENSFALG00000022941)	FZD7 (ENSFALG00000015305) #7	CDK15 (ENSFALG00000004066) #8	ALS2 (ENSFALG00000004075) #9	MPP4 (ENSFALG00000004089) #10	TMEM237 (ENSFALG00000004109) #11	STRADB (ENSFALG00000004116) #13	TRAK2 (ENSFALG00000004122) #15	CASP8 (ENSFALG00000004124) #17	ENSFALG00000004128	CASP10 (ENSFALG00000004132) #18	CFLAR (ENSFALG00000004136) #19	NDUFB3 (ENSFALG00000004140) #20	HYCC2 (ENSFALG00000004144) #21	ENSFALG00000028144 #22	NIF3L1 (ENSFALG00000024500) #23	PPIL3 (ENSFALG00000023399) #24	BZW1 (ENSFALG00000027684) #26	AOX1 (ENSFALG00000004179) #27	ENSFALG00000025029 #29	KCTD18 (ENSFALG00000004224) #30	SPATS2L (ENSFALG00000004226) #31	MAIP1 (ENSFALG00000026216) #32	TYW5 (ENSFALG00000026401) #33	C2orf69 (ENSFALG00000028312) #34	ENSFALG00000025773	SATB2 (ENSFALG00000004242) #37	PLCL1 (ENSFALG00000004251)	BOLL (ENSFALG00000004255)	RFTN2 (ENSFALG00000004261)
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Medium ground finch	MODERN SPECIES	1	NOP58 (ENSGFOG00000006953)	SUMO1 (ENSGFOG00000006984)	FZD7 (ENSGFOG00000006992) #7	CDK15 (ENSGFOG00000006998) #8	ALS2 (ENSGFOG00000007025) #9	MPP4 (ENSGFOG00000007211) #10	TMEM237 (ENSGFOG00000000008) #11	STRADB (ENSGFOG00000000099) #13	TRAK2 (ENSGFOG00000000109) #15	CASP8 (ENSGFOG00000000120) #17	ENSGFOG00000000126	CASP10 (ENSGFOG00000000131) #18	CFLAR (ENSGFOG00000000133) #19	NDUFB3 (ENSGFOG00000000135) #20	HYCC2 (ENSGFOG00000000137) #21	ORC2 (ENSGFOG00000000142) #22	NIF3L1 (ENSGFOG00000000152) #23	PPIL3 (ENSGFOG00000000157) #24	BZW1 (ENSGFOG00000000164) #26	AOX1 (ENSGFOG00000000189) #27	SPATS2L (ENSGFOG00000000276) #31	MAIP1 (ENSGFOG00000000285) #32	TYW5 (ENSGFOG00000000292) #33	C2orf69 (ENSGFOG00000000297) #34	SATB2 (ENSGFOG00000000304) #37	PLCL1 (ENSGFOG00000000319)	BOLL (ENSGFOG00000000330)	RFTN2 (ENSGFOG00000000339)	MOB4 (ENSGFOG00000000351)	HSPE1 (ENSGFOG00000000358)	HSPD1 (ENSGFOG00000000363)
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b.j.a #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT00530000063480.a	ENSGT00530000063609.a	ENSGT01050000244956.b
Zebra finch	MODERN SPECIES	29	SUMO1 (ENSTGUG00000023148)	FZD7 (ENSTGUG00000010149) #7	CDK15 (ENSTGUG00000010151) #8	ALS2 (ENSTGUG00000010168) #9	MPP4 (ENSTGUG00000010238) #10	TMEM237 (ENSTGUG00000010245) #11	STRADB (ENSTGUG00000010255) #13	TRAK2 (ENSTGUG00000010267) #15	CASP8 (ENSTGUG00000026325) #17	ENSTGUG00000010299	CASP10 (ENSTGUG00000010306) #18	CFLAR (ENSTGUG00000010309) #19	NDUFB3 (ENSTGUG00000027597) #20	HYCC2 (ENSTGUG00000023035) #21	BZW1 (ENSTGUG00000010398) #26	ORC2 (ENSTGUG00000010352) #22	NIF3L1 (ENSTGUG00000010385) #23	PPIL3 (ENSTGUG00000010395) #24	AOX1 (ENSTGUG00000010409) #27	ENSTGUG00000010459 #29	ENSTGUG00000024909 #30	SPATS2L (ENSTGUG00000010462) #31	MAIP1 (ENSTGUG00000010466) #32	TYW5 (ENSTGUG00000010474) #33	C2orf69 (ENSTGUG00000028654) #34	SATB2 (ENSTGUG00000010480) #37	PLCL1 (ENSTGUG00000010492)	BOLL (ENSTGUG00000010496)	RFTN2 (ENSTGUG00000010512)	MOB4 (ENSTGUG00000027293)	HSPE1 (ENSTGUG00000020798)
Common canary	MODERN SPECIES	8	NOP58 (ENSSCAG00000002544)	SUMO1 (ENSSCAG00000002566)	FZD7 (ENSSCAG00000002572) #7	CDK15 (ENSSCAG00000002582) #8	ALS2 (ENSSCAG00000002597) #9	MPP4 (ENSSCAG00000002617) #10	TMEM237 (ENSSCAG00000002645) #11	STRADB (ENSSCAG00000002649) #13	TRAK2 (ENSSCAG00000002660) #15	CASP8 (ENSSCAG00000002673) #17	ENSSCAG00000002679	CASP10 (ENSSCAG00000002684) #18	CFLAR (ENSSCAG00000002692) #19	NDUFB3 (ENSSCAG00000002696) #20	HYCC2 (ENSSCAG00000002703) #21	ORC2 (ENSSCAG00000002715) #22	NIF3L1 (ENSSCAG00000002725) #23	PPIL3 (ENSSCAG00000002731) #24	BZW1 (ENSSCAG00000002739) #26	AOX1 (ENSSCAG00000002748) #27	ENSSCAG00000002760 #29	SPATS2L (ENSSCAG00000002770) #31	MAIP1 (ENSSCAG00000002783) #32	TYW5 (ENSSCAG00000002800) #33	C2orf69 (ENSSCAG00000002803) #34	SATB2 (ENSSCAG00000002810) #37	PLCL1 (ENSSCAG00000002820)	BOLL (ENSSCAG00000002826)	RFTN2 (ENSSCAG00000002834)	MOB4 (ENSSCAG00000002843)	HSPE1 (ENSSCAG00000002849)
African ostrich	MODERN SPECIES	942	BMPR2 (ENSSCUG00000016286)	NOP58 (ENSSCUG00000016291)	SUMO1 (ENSSCUG00000016297)	CDK15 (ENSSCUG00000016301) #8	ALS2 (ENSSCUG00000016313) #9	MPP4 (ENSSCUG00000016358) #10	TMEM237 (ENSSCUG00000016409) #11	STRADB (ENSSCUG00000016412) #13	TRAK2 (ENSSCUG00000016418) #15	CASP8 (ENSSCUG00000016432) #17	ENSSCUG00000016436	CASP10 (ENSSCUG00000016442) #18	CFLAR (ENSSCUG00000016446) #19	NDUFB3 (ENSSCUG00000016453) #20	HYCC2 (ENSSCUG00000016462) #21	ORC2 (ENSSCUG00000016468) #22	NIF3L1 (ENSSCUG00000016470) #23	PPIL3 (ENSSCUG00000016471) #24	CLK1 (ENSSCUG00000016472) #25	BZW1 (ENSSCUG00000016473) #26	AOX1 (ENSSCUG00000016478) #27	KCTD18 (ENSSCUG00000016483) #30	SPATS2L (ENSSCUG00000016486) #31
Australian saltwater crocodile	MODERN SPECIES	66	COL6A2 (ENSCPRG00005008124)	ENSCPRG00005008137	ENSCPRG00005008155	ENSCPRG00005008195	SLC19A1 (ENSCPRG00005008254)	ENSCPRG00005008263	STRADB (ENSCPRG00005008312) #13	TRAK2 (ENSCPRG00005008325) #15	CASP8 (ENSCPRG00005008344) #17	ENSCPRG00005008345	ENSCPRG00005008354	CASP10 (ENSCPRG00005008356) #18	CFLAR (ENSCPRG00005008361) #19	NDUFB3 (ENSCPRG00005008367) #20	HYCC2 (ENSCPRG00005008388) #21	ORC2 (ENSCPRG00005008409) #22	NIF3L1 (ENSCPRG00005008503) #23	PPIL3 (ENSCPRG00005008579) #24	CLK1 (ENSCPRG00005008601) #25	BZW1 (ENSCPRG00005008656) #26	ENSCPRG00005008919 #27	ENSCPRG00005009153 #27	ENSCPRG00005009165 #27	ENSCPRG00005009184 #27	ENSCPRG00005009193 #27	KCTD18 (ENSCPRG00005009197) #30	SPATS2L (ENSCPRG00005009201) #31	TYW5 (ENSCPRG00005009213) #33	C2orf69 (ENSCPRG00005009215) #34	FTCDNL1 (ENSCPRG00005009218) #35	SATB2 (ENSCPRG00005009227) #37
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00940000154107.b #29	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT01030000235401
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316.d #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234.o #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00960000192086	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407
Goode s thornscrub tortoise	MODERN SPECIES	2	NOP58 (ENSGEVG00005011819)	SUMO1 (ENSGEVG00005011902)	FZD7 (ENSGEVG00005011937) #7	CDK15 (ENSGEVG00005011981) #8	ALS2 (ENSGEVG00005012121) #9	MPP4 (ENSGEVG00005012348) #10	TMEM237 (ENSGEVG00005012993) #11	STRADB (ENSGEVG00005013022) #13	TRAK2 (ENSGEVG00005013111) #15	CASP8 (ENSGEVG00005013203) #17	ENSGEVG00005013257	CASP10 (ENSGEVG00005013305) #18	CFLAR (ENSGEVG00005013349) #19	ENSGEVG00005013378 #20	HYCC2 (ENSGEVG00005013408) #21	ORC2 (ENSGEVG00005013508) #22	NIF3L1 (ENSGEVG00005013708) #23	PPIL3 (ENSGEVG00005013737) #24	CLK1 (ENSGEVG00005013766) #25	BZW1 (ENSGEVG00005013813) #26	ENSGEVG00005013897 #27	ENSGEVG00005014463 #27	KCTD18 (ENSGEVG00005014582) #30	SPATS2L (ENSGEVG00005014623) #31	MAIP1 (ENSGEVG00005014681) #32	TYW5 (ENSGEVG00005014741) #33	C2orf69 (ENSGEVG00005014762) #34	ENSGEVG00005014793	FTCDNL1 (ENSGEVG00005014851) #35	SATB2 (ENSGEVG00005014931) #37	PLCL1 (ENSGEVG00005015176)
Abingdon island giant tortoise	MODERN SPECIES	2099	NOP58 (ENSCABG00000011580)	SUMO1 (ENSCABG00000011584)	CDK15 (ENSCABG00000011592) #8	ALS2 (ENSCABG00000011606) #9	MPP4 (ENSCABG00000011988) #10	TMEM237 (ENSCABG00000012125) #11	STRADB (ENSCABG00000012127) #13	TRAK2 (ENSCABG00000012129) #15	ENSCABG00000012169	CASP8 (ENSCABG00000012170) #17	ENSCABG00000012181	CASP10 (ENSCABG00000012183) #18	CFLAR (ENSCABG00000012186) #19	ENSCABG00000012188 #20	HYCC2 (ENSCABG00000012190) #21	ORC2 (ENSCABG00000012349) #22	NIF3L1 (ENSCABG00000012350) #23	PPIL3 (ENSCABG00000012386) #24	CLK1 (ENSCABG00000012388) #25	BZW1 (ENSCABG00000012389) #26	ENSCABG00000012398 #27	ENSCABG00000012405 #27
Emydidae	ANCESTRAL SPECIES	4	ENSGT00860000133854	ENSGT00940000158239.b #7	ENSGT00940000159606 #8	ENSGT00940000155861.C #9	ENSGT00940000156444 #10	ENSGT00390000005159 #11	ENSGT00390000018209 #12	ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000003590 #23	ENSGT00940000153189.B #24	ENSGT00940000159722 #25	ENSGT00390000012561.b #26	ENSGT00950000183114.a.b.b.c.b #27	ENSGT00950000183114.a.b.b.c.a #27	ENSGT00530000064234 #30	ENSGT00390000001138.b #31	ENSGT00390000004145 #32	ENSGT00940000158493 #33	ENSGT00390000005550 #34	ENSGT00390000005581.b #35	ENSGT00390000008096.B #37	ENSGT00940000158407	ENSGT01030000235401
Three-toed box turtle	MODERN SPECIES	25	NOP58 (ENSTMTG00000010944)	SUMO1 (ENSTMTG00000010925)	FZD7 (ENSTMTG00000010912) #7	CDK15 (ENSTMTG00000010659) #8	ALS2 (ENSTMTG00000010542) #9	MPP4 (ENSTMTG00000010162) #10	TMEM237 (ENSTMTG00000010099) #11	STRADB (ENSTMTG00000010068) #13	TRAK2 (ENSTMTG00000009961) #15	CASP8 (ENSTMTG00000009929) #17	ENSTMTG00000009900	CASP10 (ENSTMTG00000009875) #18	CFLAR (ENSTMTG00000009842) #19	NDUFB3 (ENSTMTG00000009826) #20	HYCC2 (ENSTMTG00000009797) #21	ORC2 (ENSTMTG00000009760) #22	NIF3L1 (ENSTMTG00000009742) #23	PPIL3 (ENSTMTG00000009721) #24	CLK1 (ENSTMTG00000009691) #25	BZW1 (ENSTMTG00000009663) #26	ENSTMTG00000009541 #27	ENSTMTG00000009481 #27	KCTD18 (ENSTMTG00000009452) #30	SPATS2L (ENSTMTG00000009400) #31	MAIP1 (ENSTMTG00000009374) #32	TYW5 (ENSTMTG00000009344) #33	C2orf69 (ENSTMTG00000009340) #34	FTCDNL1 (ENSTMTG00000009322) #35	SATB2 (ENSTMTG00000009198) #37	PLCL1 (ENSTMTG00000009159)	ENSTMTG00000009149
painted turtle	MODERN SPECIES	2	KIAA2012 (ENSCPBG00000011578)	FZD7 (ENSCPBG00000011582) #7	CDK15 (ENSCPBG00000011587) #8	ALS2 (ENSCPBG00000011591) #9	MPP4 (ENSCPBG00000011594) #10	TMEM237 (ENSCPBG00000011689) #11	ENSCPBG00000011694 #12	STRADB (ENSCPBG00000011698) #13	TRAK2 (ENSCPBG00000011705) #15	FLACC1 (ENSCPBG00000011709) #16	CASP8 (ENSCPBG00000011716) #17	ENSCPBG00000011719	ENSCPBG00000011723 #19	NDUFB3 (ENSCPBG00000011726) #20	HYCC2 (ENSCPBG00000011729) #21	ORC2 (ENSCPBG00000011736) #22	NIF3L1 (ENSCPBG00000011743) #23	PPIL3 (ENSCPBG00000011745) #24	CLK1 (ENSCPBG00000011747) #25	BZW1 (ENSCPBG00000011755) #26	ENSCPBG00000011762 #27	ENSCPBG00000011787 #27	KCTD18 (ENSCPBG00000011796) #30	SPATS2L (ENSCPBG00000011805) #31	MAIP1 (ENSCPBG00000011829) #32	TYW5 (ENSCPBG00000011833) #33	C2orf69 (ENSCPBG00000011840) #34	FTCDNL1 (ENSCPBG00000011843) #35	ENSCPBG00000011848 #37
Chinese turtle	MODERN SPECIES	677										NRP2 (ENSPSIG00000005456)	PARD3B (ENSPSIG00000004999)	ENSPSIG00000001200	CFLAR (ENSPSIG00000004865) #19	NDUFB3 (ENSPSIG00000004805) #20	HYCC2 (ENSPSIG00000004753) #21	ORC2 (ENSPSIG00000004159) #22	NIF3L1 (ENSPSIG00000004085) #23	PPIL3 (ENSPSIG00000003967) #24	CLK1 (ENSPSIG00000003762) #25	BZW1 (ENSPSIG00000003613) #26	ENSPSIG00000003574 #27	ENSPSIG00000003565 #27	ENSPSIG00000003550	ENSPSIG00000018142 #27	ENSPSIG00000018140 #29	KCTD18 (ENSPSIG00000018125) #30	ENSPSIG00000018117 #31	TYW5 (ENSPSIG00000018111) #33	C2orf69 (ENSPSIG00000001193) #34	SATB2 (ENSPSIG00000018044) #37	PLCL1 (ENSPSIG00000018022)
Anura	ANCESTRAL SPECIES	234					ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00400000022323 #16	ENSGT00970000198411	ENSGT00940000160319 #17	ENSGT00940000164225	ENSGT00940000160994 #18	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000002374	ENSGT00390000015228 #22	ENSGT00390000012561.b #26
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000002521	ENSLLEG00000002352	LIPT1 (ENSLLEG00000002301)	ENSLLEG00000001982	ENSLLEG00000001937	ENSLLEG00000001877	CNTN2 (ENSLLEG00000001673)	DCAF6 (ENSLLEG00000001357)	ZNHIT3 (ENSLLEG00000001287)	MYO19 (ENSLLEG00000001213)	PIGW (ENSLLEG00000001206)	GGNBP2 (ENSLLEG00000001180)	SLC41A1 (ENSLLEG00000001142)	RAB29 (ENSLLEG00000001126)	NUCKS1 (ENSLLEG00000001102)	ENSLLEG00000001088 #22	SLC45A3 (ENSLLEG00000001078)	ENSLLEG00000001069	ENSLLEG00000001066	ELK4 (ENSLLEG00000001044)	ENSLLEG00000001035	MFSD4A (ENSLLEG00000001009)	CDK18 (ENSLLEG00000000794)	ENSLLEG00000000783	ENSLLEG00000000774	ENSLLEG00000000732	KLHDC8A (ENSLLEG00000000686)	NUAK2 (ENSLLEG00000000659)	TMCC2 (ENSLLEG00000000610)	DSTYK (ENSLLEG00000000488)	ENSLLEG00000000454
Leishan spiny toad	MODERN SPECIES	10	ENSLLEG00000018758 #15	ENSLLEG00000019013	ENSLLEG00000019060 #15	ENSLLEG00000019343	CASP8 (ENSLLEG00000019623) #17	ENSLLEG00000019795	ENSLLEG00000019931	ENSLLEG00000020069	CASP10 (ENSLLEG00000020096) #18	ENSLLEG00000020352	CFLAR (ENSLLEG00000020738) #19	ENSLLEG00000020839	NDUFB3 (ENSLLEG00000020863) #20	HYCC2 (ENSLLEG00000020918) #21	C9orf64 (ENSLLEG00000021144)	ENSLLEG00000021218 #22	ENSLLEG00000021462 #26	ENSLLEG00000021830 ##27	ENSLLEG00000022457 ##27	ENSLLEG00000022845 ##27	ENSLLEG00000024214 #27	ENSLLEG00000024411 ##27	KCTD18 (ENSLLEG00000024654) #30	ENSLLEG00000024716 #31	ENSLLEG00000024809 #32	TYW5 (ENSLLEG00000024861) #33	C2orf69 (ENSLLEG00000024970) #34	ENSLLEG00000024996 #35	ENSLLEG00000025021	SATB2 (ENSLLEG00000025046) #37	PLCL1 (ENSLLEG00000025184)
Frog	MODERN SPECIES	9	c3orf70 (ENSXETG00000018612)	ENSXETG00000046098	ehhadh (ENSXETG00000031689)	tmem41a (ENSXETG00000033905)	map3k13 (ENSXETG00000032171)	ENSXETG00000048710	ctla4 (ENSXETG00000036858)	cd28 (ENSXETG00000033572)	raph1 (ENSXETG00000031265)	abi2 (ENSXETG00000004155)	ndufb3 (ENSXETG00000004154)	fam126b (ENSXETG00000029958) #21	ENSXETG00000038623	c9orf64 (ENSXETG00000004152)	c9orf64 (ENSXETG00000030274)	orc2 (ENSXETG00000004151) #22	bzw1 (ENSXETG00000030733) #26	cflar (ENSXETG00000033867) #19	resf1 (ENSXETG00000004145) #18	ENSXETG00000041051	casp8 (ENSXETG00000032748)	casc3 (ENSXETG00000004143) #13	trak2 (ENSXETG00000032904) #15	flacc1 (ENSXETG00000035925) #16	tmem237 (ENSXETG00000027500) #11	ENSXETG00000031296 #10	ENSXETG00000045773	plcl1 (ENSXETG00000032204)	satb2 (ENSXETG00000035931) #37	XB5818974 [provisional] (ENSXETG00000018288) #35	c2orf69 (ENSXETG00000018287) #34
Coelacanth	MODERN SPECIES	724													ENSLACG00000015306 #19	NDUFB3 (ENSLACG00000015249) #20	HYCC2 (ENSLACG00000014573) #21	ORC2 (ENSLACG00000014346) #22	CFAP410 (ENSLACG00000014269)	ENSLACG00000013987	TRPM2 (ENSLACG00000013507)	EHHADH (ENSLACG00000012550)	VPS8 (ENSLACG00000009426)	ENSLACG00000006711 #27	ADPRH (ENSLACG00000006580)	ENSLACG00000005151 #27	BZW1 (ENSLACG00000002968) #26	LCMT2 (ENSLACG00000001742)	CRYGS (ENSLACG00000001639)	TBCCD1 (ENSLACG00000000086)
Actinopterygii	ANCESTRAL SPECIES	336								ENSGT00940000155390 #13	ENSGT00940000158202 #15	ENSGT00940000160319.i.a #17	ENSGT00940000160994 #18	ENSGT00940000164225	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000156404
Neopterygii	ANCESTRAL SPECIES	61													ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000016988.a.a.a.b	ENSGT00940000156882	ENSGT00390000015276	ENSGT00940000153239.A	ENSGT00940000158179	ENSGT00940000157608	ENSGT00940000164537	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516
Osteoglossocephalai	ANCESTRAL SPECIES	56	ENSGT01050000244890.a.b.a.i.b	ENSGT01050000244848.C.a	ENSGT00940000159262	ENSGT00390000002862.tb	ENSGT00390000002862.ub	ENSGT00940000155953	ENSGT00950000182883.b.a.a	ENSGT00940000159677.a.a	ENSGT00940000159677.a.b	ENSGT01100000263556.a.a.p.a	ENSGT01100000263521.b	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199 #19	ENSGT00390000010316 #20	ENSGT00390000011295.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000016988.a.a.a.b	ENSGT00940000156882	ENSGT00390000015276	ENSGT00940000153239.A	ENSGT00940000158179	ENSGT00940000157608	ENSGT00940000164537	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516
Clupeocephala	ANCESTRAL SPECIES	508													ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807
Otomorpha	ANCESTRAL SPECIES	550												ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000011295.a.l.a #21	ENSGT00390000015228 #22	ENSGT00390000018807
Otophysi	ANCESTRAL SPECIES	230	ENSGT00950000183044.a.a.a.a.a	ENSGT00950000182933.A.a.b	ENSGT00940000156853	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a	ENSGT01050000244894.a.a.a.b	ENSGT00530000069282.A	ENSGT00530000069282.B	ENSGT00950000182935.B.a.c	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228 #22	ENSGT00390000018807
Characiphysae	ANCESTRAL SPECIES	8	ENSGT00940000160070.b.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00950000182933.A.a.b	ENSGT00940000156853	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a	ENSGT01050000244894.a.a.a.b	ENSGT00530000069282.A	ENSGT00950000182935.B.a.c	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156205.g
Channel catfish	MODERN SPECIES	1	MAFG (ENSIPUG00000021402)	pycr1 (ENSIPUG00000021406)	ENSIPUG00000021416	aspscr1 (ENSIPUG00000021419)	notum (ENSIPUG00000021448)	tmc6 (ENSIPUG00000021463)	tmc8 (ENSIPUG00000021499)	ENSIPUG00000021525	syngr2b (ENSIPUG00000021531)	tk1 (ENSIPUG00000021545)	afmid (ENSIPUG00000021582)	cant1 (ENSIPUG00000021609)	ENSIPUG00000021621	si:dkey-93h22.8 (ENSIPUG00000021651)	ldb1b (ENSIPUG00000021664)	orc2 (ENSIPUG00000021681) #22	c10h21orf2 (ENSIPUG00000021692)	pfkl (ENSIPUG00000021701)	rpl37a (ENSIPUG00000021767)	eif4a3 (ENSIPUG00000021785)	opn6a (ENSIPUG00000021834)	STRN (ENSIPUG00000021850)	map1lc3c (ENSIPUG00000021896)	irf2bp2 (ENSIPUG00000021926)	ENSIPUG00000021929	tomm20b (ENSIPUG00000021935)	rbm34 (ENSIPUG00000021952)	tbce (ENSIPUG00000021983)	nid1 (ENSIPUG00000022017)	gpr137b (ENSIPUG00000022038)	ero1b (ENSIPUG00000022054)
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00940000160070.b.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00950000182933.A.a.b	ENSGT00940000156853	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a	ENSGT01050000244894.a.a.a.b	ENSGT00530000069282.A	ENSGT00950000182935.B.a.c	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156205.g
Characoidei	ANCESTRAL SPECIES	18	ENSGT00940000160070.b.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00950000182933.A.a.b	ENSGT00940000156853	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a	ENSGT01050000244894.a.a.a.b	ENSGT00530000069282.A	ENSGT00950000182935.B.a.c	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156291.f
Red-bellied piranha	MODERN SPECIES	649								gpc4 (ENSPNAG00000007885)	hs6st2 (ENSPNAG00000005289)	mbnl3 (ENSPNAG00000007910)	rap2c (ENSPNAG00000007924)	zgc:92907 (ENSPNAG00000007933)	il2rgb (ENSPNAG00000007954)	ENSPNAG00000007957	ldb1b (ENSPNAG00000000573)	ORC2 (ENSPNAG00000007996) #22	ENSPNAG00000008005	pfklb (ENSPNAG00000008024)	zgc:171772 (ENSPNAG00000000609)	eif4a3 (ENSPNAG00000008053)	opn6a (ENSPNAG00000008071)	ENSPNAG00000000647	ENSPNAG00000000652	ENSPNAG00000008090
Mexicana tetra	MODERN SPECIES	20	mafgb (ENSAMXG00000020381)	pycr1b (ENSAMXG00000040337)	ENSAMXG00000025273	aspscr1 (ENSAMXG00000020425)	NOTUM (ENSAMXG00000020491)	TMC6 (ENSAMXG00000020529)	TMC8 (ENSAMXG00000020582)	ENSAMXG00000031343	syngr2b (ENSAMXG00000037996)	tk1 (ENSAMXG00000020703)	afmid (ENSAMXG00000039072)	cant1b (ENSAMXG00000043529)	ENSAMXG00000029086	si:dkey-93h22.8 (ENSAMXG00000020783)	ldb1b (ENSAMXG00000012067)	ENSAMXG00000020816 #22	CFAP410 (ENSAMXG00000034889)	pfklb (ENSAMXG00000020865)	zgc:171772 (ENSAMXG00000041482)	eif4a3 (ENSAMXG00000020882)	opn6a (ENSAMXG00000020921)	ENSAMXG00000035494	strn (ENSAMXG00000021069)	map1lc3c (ENSAMXG00000043525)	ENSAMXG00000040813	irf2bp2b (ENSAMXG00000021316)	tomm20b (ENSAMXG00000042169)	rbm34 (ENSAMXG00000021328)	ENSAMXG00000040370	tbce (ENSAMXG00000021338)	NID1 (ENSAMXG00000021348)
Electric eel	MODERN SPECIES	762			pycr1b (ENSEEEG00000021691)	ENSEEEG00000021706	aspscr1 (ENSEEEG00000021708)	ENSEEEG00000021711	TMC6 (ENSEEEG00000021714)	TMC8 (ENSEEEG00000021775)	ENSEEEG00000021779	syngr2b (ENSEEEG00000021783)	tk1 (ENSEEEG00000021784)	afmid (ENSEEEG00000021787)	cant1b (ENSEEEG00000021788)	ENSEEEG00000021789	ldb1b (ENSEEEG00000021792)	ORC2 (ENSEEEG00000021798) #22	ENSEEEG00000021815	pfklb (ENSEEEG00000021830)
Cyprinoidei	ANCESTRAL SPECIES	27	ENSGT00950000183044.a.a.a.a.a	ENSGT00950000182933.A.a.b	ENSGT00940000156853	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a	ENSGT01050000244894.a.a.a.b	ENSGT00530000069282.A	ENSGT00530000069282.B	ENSGT00950000182935.B.a.c	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000159292.v	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a	ENSGT00390000007753.a	ENSGT01100000263538.A.a.a.b.b	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.q.a
Cyprininae	ANCESTRAL SPECIES	476														ENSGT01000000219139	ENSGT00390000005639.a.b.d.b.a.a	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000159292.u.b	ENSGT00940000166218.d	ENSGT00940000160591.a.a.b	ENSGT00390000011698.c.a.b.n	ENSGT00390000011249	ENSGT00530000063405.a	ENSGT00390000007753.a	ENSGT00940000162556.A.b.g	ENSGT00390000013727.d.a.b	ENSGT01000000214413.b.a.a.q.a.b.a	ENSGT00940000155212.ab.a.d	ENSGT00390000005717.s	ENSGT00940000164897.a.b.f	ENSGT00940000158265
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2	cant1b (ENSCARG00000004397)	afmid (ENSCARG00000004378)	tk1 (ENSCARG00000004327)	syngr2b (ENSCARG00000004315)	ENSCARG00000004304	TMC8 (ENSCARG00000004260)	TMC6 (ENSCARG00000004219)	NOTUM (ENSCARG00000003858)	aspscr1 (ENSCARG00000003726)	ENSCARG00000003689	pycr1b (ENSCARG00000003650)	mafgb (ENSCARG00000003636)	TRAPPC10 (ENSCARG00000003622)	srsf11 (ENSCARG00000003612)	ankrd13c (ENSCARG00000003604)	ORC2 (ENSCARG00000003597) #22	ENSCARG00000003586	pfklb (ENSCARG00000003509)	ENSCARG00000003488	zgc:171772 (ENSCARG00000003479)	eif4a3 (ENSCARG00000003203)	opn6a (ENSCARG00000003153)	strn (ENSCARG00000003121)	prickle2b (ENSCARG00000003106)	slc2a9l1 (ENSCARG00000003090)	psmd6 (ENSCARG00000003077)	qrich1 (ENSCARG00000003017)	rpusd4 (ENSCARG00000003006)	tax1bp3 (ENSCARG00000002994)	nr2f6b (ENSCARG00000002987)	ENSCARG00000002982
Goldfish	MODERN SPECIES	2	syngr2b (ENSCARG00000011146)	tk1 (ENSCARG00000011128)	ENSCARG00000011122	afmid (ENSCARG00000011089)	cant1b (ENSCARG00000011081)	sos1 (ENSCARG00000011053)	ENSCARG00000011046	ENSCARG00000011023	ENSCARG00000011016	HNRNPLL (ENSCARG00000010964)	srsf7b (ENSCARG00000010916)	GEMIN6 (ENSCARG00000010891)	TRAPPC10 (ENSCARG00000010871)	srsf11 (ENSCARG00000010858)	ankrd13c (ENSCARG00000010823)	ORC2 (ENSCARG00000010474) #22	CFAP410 (ENSCARG00000010452)	pfklb (ENSCARG00000009473)	ENSCARG00000009390	eif4a3 (ENSCARG00000009233)	opn6a (ENSCARG00000009217)	strn (ENSCARG00000008045)	sos1 (ENSCARG00000004994)	rfc4 (ENSCARG00000004810)	ldb1b (ENSCARG00000004487)	ENSCARG00000004412	cant1b (ENSCARG00000004397)	afmid (ENSCARG00000004378)	tk1 (ENSCARG00000004327)	syngr2b (ENSCARG00000004315)	ENSCARG00000004304
Cyprininae_a	ANCESTRAL SPECIES	348				ENSGT00940000156853.r	ENSGT00390000015892.a	ENSGT01050000244894.b.b.d.a.c	ENSGT01050000244894.a.a.a.b.i	ENSGT00950000182935.B.a.c.a	ENSGT00390000011309.p	ENSGT00390000011093	ENSGT00390000012872.b.a	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b.b	ENSGT01000000219139	ENSGT00390000005639.a.b.d.b.a.a	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00940000159292.v.b	ENSGT01100000263476.E.b.a.a.a.a.b.b	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a.a	ENSGT00940000166218.d	ENSGT00940000166218.c.a	ENSGT00940000160591.a.a.b	ENSGT00390000011698.c.a.b.n	ENSGT00390000011249	ENSGT00530000063405.a.ab	ENSGT00940000156318.b.b.m	ENSGT00940000156318.b.b.n
Common carp reference	MODERN SPECIES	13	ENSCCRG00000007021	srsf11 (ENSCCRG00000079275)	mafgb (ENSCCRG00000071085)	pycr1b (ENSCCRG00000075302)	ENSCCRG00000053033	aspscr1 (ENSCCRG00000007078)	ENSCCRG00000007086	ENSCCRG00000049618	ENSCCRG00000039806	ENSCCRG00000057342	ENSCCRG00000036411	tk1 (ENSCCRG00000036374)	ENSCCRG00000038287	ldb1b (ENSCCRG00000075309)	ENSCCRG00000067968	ENSCCRG00000045296 #22	ENSCCRG00000031895	pfklb (ENSCCRG00000031972)	ENSCCRG00000047598	ENSCCRG00000010733	zgc:171772 (ENSCCRG00000010731)	eif4a3 (ENSCCRG00000021863)	opn6a (ENSCCRG00000075563)	strn (ENSCCRG00000044182)	map1lc3c (ENSCCRG00000066841)	irf2bp2b (ENSCCRG00000072833)	tomm20b (ENSCCRG00000061925)	rbm34 (ENSCCRG00000011466)	tbce (ENSCCRG00000003697)	ENSCCRG00000018986	ENSCCRG00000082110
Golden-line barbel	MODERN SPECIES	945					mafgb (ENSSGRG00000006793)	pycr1b (ENSSGRG00000006795)	aspscr1 (ENSSGRG00000006871)	NOTUM (ENSSGRG00000006886)	ENSSGRG00000006934	ENSSGRG00000006935	ENSSGRG00000006936	syngr2b (ENSSGRG00000006939)	afmid (ENSSGRG00000006943)	cant1b (ENSSGRG00000006954)	si:dkey-93h22.8 (ENSSGRG00000006956)	ORC2 (ENSSGRG00000006959) #22	ENSSGRG00000006963	ENSSGRG00000006966
Zebrafish	MODERN SPECIES	2	mafgb (ENSDARG00000100097)	pycr1b (ENSDARG00000098639)	aspscr1 (ENSDARG00000105321)	notum1b (ENSDARG00000117145)	ENSDARG00000004875	TMC8 (ENSDARG00000101050)	ENSDARG00000101146	ENSDARG00000099600	syngr2b (ENSDARG00000104470)	tk1 (ENSDARG00000102245)	afmid (ENSDARG00000099106)	cant1b (ENSDARG00000102977)	ENSDARG00000103266	si:dkey-93h22.8 (ENSDARG00000098666)	ldb1b (ENSDARG00000103158)	ENSDARG00000101465 #22	CFAP410 (ENSDARG00000099397)	pfklb (ENSDARG00000099755)	zgc:171772 (ENSDARG00000115271)	eif4a3 (ENSDARG00000102978)	opn6a (ENSDARG00000102430)	strn (ENSDARG00000100011)	map1lc3c (ENSDARG00000100528)	irf2bp2b (ENSDARG00000098635)	tomm20b (ENSDARG00000103566)	rbm34 (ENSDARG00000101877)	tbce (ENSDARG00000099921)	NID1 (ENSDARG00000103129)	ENSDARG00000077608	ero1b (ENSDARG00000103915)	ENSDARG00000105317
Clupeiformes	ANCESTRAL SPECIES	150	ENSGT00940000159169	ENSGT00390000005596.a	ENSGT00940000158272.c.a	ENSGT00940000154317.b	ENSGT00940000171777	ENSGT00950000182852.A.a.b.c	ENSGT01090000260076.b.b.a	ENSGT00390000015719.d.c	ENSGT00940000162114	ENSGT00940000155850	ENSGT00390000003873	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000011295.a.l.a #21	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000156882	ENSGT00390000015276.h	ENSGT00530000064199.c #19	ENSGT00950000183019.f.b.b.d	ENSGT00940000164110	ENSGT00530000063410.b	ENSGT01030000234607.A.b	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00940000155235.k.b	ENSGT00940000165586.b	ENSGT00940000154349	ENSGT00940000159224.b
Atlantic herring	MODERN SPECIES	13	ADGRG7 (ENSCHAG00000025877)	jagn1b (ENSCHAG00000025872)	COL8A1 (ENSCHAG00000025869)	FILIP1L (ENSCHAG00000025866)	il1rapl1b (ENSCHAG00000025857)	nr0b1 (ENSCHAG00000025855)	ENSCHAG00000025780	plekha3 (ENSCHAG00000025752)	TRAPPC10 (ENSCHAG00000025593)	tdo2b (ENSCHAG00000025566)	COL6A1 (ENSCHAG00000025541)	ENSCHAG00000025533	COL6A2 (ENSCHAG00000025523)	zgc:162816 (ENSCHAG00000025509)	ENSCHAG00000025484 #21	ORC2 (ENSCHAG00000025460) #22	ENSCHAG00000025426	pfklb (ENSCHAG00000020487)	zgc:171772 (ENSCHAG00000020336)	pecr (ENSCHAG00000020300)	tmem169a (ENSCHAG00000020298)	cflara (ENSCHAG00000020288) #19	PRKAG3 (ENSCHAG00000020132)	retreg2 (ENSCHAG00000020120)	ENSCHAG00000020080	mdh1b (ENSCHAG00000020010)	ENSCHAG00000020001	gtf3c3 (ENSCHAG00000019562)	HECW2 (ENSCHAG00000018190)	klf7a (ENSCHAG00000018122)	si:ch211-93g23.2 (ENSCHAG00000018114)
Denticle herring	MODERN SPECIES	15	vps8 (ENSDCDG00000001381)	SATB2 (ENSDCDG00000001343) #37	ENSDCDG00000001341	MOB4 (ENSDCDG00000001336)	HSPD1 (ENSDCDG00000001331)	ENSDCDG00000001326	ENSDCDG00000001325	crygmxl1 (ENSDCDG00000001315)	ENSDCDG00000001311	ENSDCDG00000001296	ENSDCDG00000001276	ENSDCDG00000001270	SOWAHC (ENSDCDG00000001263)	septin10 (ENSDCDG00000000991)	cep70 (ENSDCDG00000000891)	ORC2 (ENSDCDG00000000865) #22	ENSDCDG00000000854	pfklb (ENSDCDG00000000691)	zgc:171772 (ENSDCDG00000000568)	pecr (ENSDCDG00000000562)	tmem169a (ENSDCDG00000000559)	cflara (ENSDCDG00000000549) #19	ENSDCDG00000000512	retreg2 (ENSDCDG00000000460)	mdh1b (ENSDCDG00000000441)	ENSDCDG00000000432	mettl21a (ENSDCDG00000000427)	FGF14 (ENSDCDG00000000421)	ENSDCDG00000000412	ENSDCDG00000000403	ENSDCDG00000000374
Euteleosteomorpha	ANCESTRAL SPECIES	315													ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.b	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00940000163427.d
Acanthomorphata	ANCESTRAL SPECIES	57	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000156207.b.c.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00940000162889	ENSGT01030000235116	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000156207.b.c.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00940000162889	ENSGT01030000235116	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT01030000235116	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Tiger tail seahorse	MODERN SPECIES	110	eif2b5 (ENSHCOG00000015732)	ENSHCOG00000015681	ENSHCOG00000015603	ENSHCOG00000015578	LIMD2 (ENSHCOG00000015469)	CSRNP1 (ENSHCOG00000015437)	gorasp1a (ENSHCOG00000015407)	wdr48b (ENSHCOG00000015401)	scn12aa (ENSHCOG00000015345)	ENSHCOG00000015291	ENSHCOG00000015281	COL6A1 (ENSHCOG00000015262)	ENSHCOG00000014992	COL6A2 (ENSHCOG00000014976)	zgc:162816 (ENSHCOG00000014956)	ENSHCOG00000014912 #22	ENSHCOG00000014904	zgc:171772 (ENSHCOG00000014876)	pecr (ENSHCOG00000014869)	ENSHCOG00000014863 #20	ugt1b7 (ENSHCOG00000014793)	ENSHCOG00000012293	mcm6 (ENSHCOG00000012261)
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Aplocheiloidei	ANCESTRAL SPECIES	19	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00390000006290	ENSGT00940000155219.hb.a	ENSGT00480000042679.b.b	ENSGT00390000013700
Mangrove rivulus	MODERN SPECIES	55	oxsr1a (ENSKMAG00000019745)	ENSKMAG00000019709	ENSKMAG00000019677	ENSKMAG00000019662	ENSKMAG00000019653	ENSKMAG00000019642	xirp1 (ENSKMAG00000019628)	CSRNP1 (ENSKMAG00000019611)	gorasp1a (ENSKMAG00000019595)	wdr48b (ENSKMAG00000019529)	scn12aa (ENSKMAG00000019452)	ENSKMAG00000019438	COL6A1 (ENSKMAG00000019369)	COL6A2 (ENSKMAG00000019310)	zgc:162816 (ENSKMAG00000019282)	ENSKMAG00000019234 #22	CFAP410 (ENSKMAG00000019261)	zgc:171772 (ENSKMAG00000019215)
Turquoise killifish	MODERN SPECIES	1618	plcd1b (ENSNFUG00015009661)	ENSNFUG00015011380	ENSNFUG00015011393	ENSNFUG00015011411	ENSNFUG00015011420	CSRNP1A (ENSNFUG00015011432)	gorasp1a (ENSNFUG00015011436)	WDR48 (ENSNFUG00015011484)	scn12aa (ENSNFUG00015011887)	ENSNFUG00015012064	Nfu_g_1_020581 (ENSNFUG00015012068)	COL6A1 (ENSNFUG00015012075)	COL6A2 (ENSNFUG00015012096)	ENSNFUG00015012180	zgc:162816 (ENSNFUG00015012190)	ORC2 (ENSNFUG00015012213) #22	pecr (ENSNFUG00015012245)	zgc:171772 (ENSNFUG00015012259)	C21ORF2 (ENSNFUG00015012264)	ndufb3 (ENSNFUG00015012270) #20	ENSNFUG00015012284	CXCR4 (ENSNFUG00015012371)	mcm6 (ENSNFUG00015004708)	TMBIM1 (ENSNFUG00015005013)	OLA.3179 (ENSNFUG00015005103)	catip (ENSNFUG00015005115)	ENSNFUG00015005135	ENSNFUG00015005149	ENSNFUG00015005154	ENSNFUG00015005159	PCDH8 (ENSNFUG00015005170)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT01100000264009	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT01100000264009	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00670000098080	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A
Poecilia	ANCESTRAL SPECIES	19	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT01100000264009	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00670000098080	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A
NAME_6	ANCESTRAL SPECIES	89	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b.a	ENSGT01050000244824.D.b.t	ENSGT01050000244848.C.b.b	ENSGT01050000244824.D.b.s	ENSGT00670000098080	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818
Amazon molly	MODERN SPECIES	301	oxsr1a (ENSPFOG00000015726)	ENSPFOG00000024333	ENSPFOG00000015637	ENSPFOG00000021933	LIMD2 (ENSPFOG00000015631)	xirp1 (ENSPFOG00000015628)	CSRNP1 (ENSPFOG00000015623)	gorasp1a (ENSPFOG00000015603)	wdr48b (ENSPFOG00000015559)	scn12aa (ENSPFOG00000015400)	ENSPFOG00000015385	COL6A1 (ENSPFOG00000015131)	ENSPFOG00000024796	COL6A2 (ENSPFOG00000014799)	zgc:162816 (ENSPFOG00000014753)	ENSPFOG00000014686 #22	CFAP410 (ENSPFOG00000014666)	zgc:171772 (ENSPFOG00000014663)	pecr (ENSPFOG00000014634)	ndufb3 (ENSPFOG00000014627) #20	ENSPFOG00000014557	ENSPFOG00000024559	ENSPFOG00000014542	mcm6 (ENSPFOG00000014432)	ENSPFOG00000014406	mcm6 (ENSPFOG00000014294)	xrn1 (ENSPFOG00000013932)	cop1 (ENSPFOG00000013768)	PAPPA2 (ENSPFOG00000013446)	ASTN1 (ENSPFOG00000013059)	brinp2 (ENSPFOG00000012910)
Sailfin molly	MODERN SPECIES	1685										ENSPLAG00000021012	ENSPLAG00000021019	ENSPLAG00000021031	COL6A1 (ENSPLAG00000021111)	COL6A2 (ENSPLAG00000021129)	zgc:162816 (ENSPLAG00000021174)	ENSPLAG00000021186 #22	CFAP410 (ENSPLAG00000021192)	zgc:171772 (ENSPLAG00000021196)	pecr (ENSPLAG00000021214)	ndufb3 (ENSPLAG00000021221) #20	ugt1b7 (ENSPLAG00000021706)
Guppy	MODERN SPECIES	447	oxsr1a (ENSPREG00000021697)	ENSPREG00000021687	ENSPREG00000021659	xirp1 (ENSPREG00000021646)	CSRNP1 (ENSPREG00000021642)	gorasp1a (ENSPREG00000021634)	wdr48b (ENSPREG00000021626)	ENSPREG00000021620	ENSPREG00000021612	scn12aa (ENSPREG00000021599)	ENSPREG00000021581	COL6A1 (ENSPREG00000021526)	ENSPREG00000021504	COL6A2 (ENSPREG00000021457)	zgc:162816 (ENSPREG00000021431)	ENSPREG00000021418 #22	CFAP410 (ENSPREG00000021401)	zgc:171772 (ENSPREG00000021341)	pecr (ENSPREG00000021301)	ndufb3 (ENSPREG00000021292) #20	ugt1b7 (ENSPREG00000021283)	ENSPREG00000021266	mcm6 (ENSPREG00000021229)	xrn1 (ENSPREG00000021147)	cop1 (ENSPREG00000021094)	PAPPA2 (ENSPREG00000021060)	ASTN1 (ENSPREG00000021023)
Platyfish	MODERN SPECIES	20	oxsr1a (ENSXMAG00000000211)	ENSXMAG00000000210	ENSXMAG00000000207	ENSXMAG00000029751	ENSXMAG00000025379	CSRNP1 (ENSXMAG00000029766)	gorasp1a (ENSXMAG00000014993)	wdr48b (ENSXMAG00000011491)	scn12aa (ENSXMAG00000011587)	ENSXMAG00000024849	ENSXMAG00000028203	ENSXMAG00000029973	COL6A1 (ENSXMAG00000011666)	COL6A2 (ENSXMAG00000011687)	zgc:162816 (ENSXMAG00000011762)	ENSXMAG00000011765 #22	CFAP410 (ENSXMAG00000022437)	zgc:171772 (ENSXMAG00000022077)	pecr (ENSXMAG00000011806)	ndufb3 (ENSXMAG00000000694) #20	ENSXMAG00000018293	ENSXMAG00000018297	mcm6 (ENSXMAG00000018299)	xrn1 (ENSXMAG00000018320)	cop1 (ENSXMAG00000018345)	PAPPA2 (ENSXMAG00000018380)	ASTN1 (ENSXMAG00000018404)	brinp2 (ENSXMAG00000025244)	ENSXMAG00000022416	ENSXMAG00000022458	klhl20 (ENSXMAG00000018432)
NAME_4	ANCESTRAL SPECIES	9	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01100000264009	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Mummichog	MODERN SPECIES	2251	ctdsplb (ENSFHEG00000018093)	plcd1b (ENSFHEG00000018171)	oxsr1a (ENSFHEG00000018199)	ENSFHEG00000018328	LIMD2 (ENSFHEG00000018335)	xirp1 (ENSFHEG00000018340)	CSRNP1 (ENSFHEG00000018346)	gorasp1a (ENSFHEG00000018355)	wdr48b (ENSFHEG00000018394)	ENSFHEG00000018411	scn12aa (ENSFHEG00000018490)	ENSFHEG00000018494	COL6A1 (ENSFHEG00000018553)	COL6A2 (ENSFHEG00000000668)	zgc:162816 (ENSFHEG00000018612)	ENSFHEG00000018622 #22	CFAP410 (ENSFHEG00000018630)	zgc:171772 (ENSFHEG00000018673)	pecr (ENSFHEG00000018684)	ndufb3 (ENSFHEG00000018689) #20	ENSFHEG00000018697	ENSFHEG00000018702	ENSFHEG00000018739	mcm6 (ENSFHEG00000018803)	ENSFHEG00000018809	tmbim1a (ENSFHEG00000018815)	ENSFHEG00000018828	catip (ENSFHEG00000018836)	ENSFHEG00000018851	ENSFHEG00000018886	PCDH8 (ENSFHEG00000018924)
Sheepshead minnow	MODERN SPECIES	776	plcd1b (ENSCVAG00000015197)	oxsr1a (ENSCVAG00000015282)	ENSCVAG00000015326	ENSCVAG00000015334	ENSCVAG00000015340	xirp1 (ENSCVAG00000015343)	CSRNP1 (ENSCVAG00000015366)	gorasp1a (ENSCVAG00000015419)	wdr48b (ENSCVAG00000015450)	ENSCVAG00000015463	scn12aa (ENSCVAG00000015521)	ENSCVAG00000015531	COL6A1 (ENSCVAG00000015580)	COL6A2 (ENSCVAG00000015596)	zgc:162816 (ENSCVAG00000015618)	ENSCVAG00000015629 #22	CFAP410 (ENSCVAG00000015637)	zgc:171772 (ENSCVAG00000015655)	pecr (ENSCVAG00000015679)
Oryzias	ANCESTRAL SPECIES	12	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000163996	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000163996	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Indian medaka	MODERN SPECIES	10	ctdsplb (ENSOMEG00000012204)	plcd1b (ENSOMEG00000012138)	oxsr1a (ENSOMEG00000012052)	ENSOMEG00000012010	ENSOMEG00000011989	xirp1 (ENSOMEG00000011971)	CSRNP1 (ENSOMEG00000011955)	gorasp1a (ENSOMEG00000011947)	wdr48b (ENSOMEG00000011918)	scn12aa (ENSOMEG00000011796)	ENSOMEG00000011773	ENSOMEG00000011763	COL6A1 (ENSOMEG00000011685)	COL6A2 (ENSOMEG00000011588)	zgc:162816 (ENSOMEG00000011546)	ENSOMEG00000011518 #22	CFAP410 (ENSOMEG00000011451)	zgc:171772 (ENSOMEG00000011431)	ENSOMEG00000011410	pecr (ENSOMEG00000000269)	ENSOMEG00000011349	ndufb3 (ENSOMEG00000011326) #20	ENSOMEG00000011306	mcm6 (ENSOMEG00000011275)	ENSOMEG00000011181	tmbim1a (ENSOMEG00000011233)	ENSOMEG00000011171	ENSOMEG00000011143	ENSOMEG00000011100	ENSOMEG00000011057	ENSOMEG00000011041
Javanese ricefish	MODERN SPECIES	8	ctdsplb (ENSOJAG00000004532)	plcd1b (ENSOJAG00000003892)	oxsr1a (ENSOJAG00000002839)	ENSOJAG00000002640	LIMD2 (ENSOJAG00000002619)	xirp1 (ENSOJAG00000002634)	CSRNP1 (ENSOJAG00000002609)	gorasp1a (ENSOJAG00000002597)	wdr48b (ENSOJAG00000002434)	ENSOJAG00000002390	scn12aa (ENSOJAG00000002053)	ENSOJAG00000001947	ENSOJAG00000015028	COL6A1 (ENSOJAG00000014695)	zgc:162816 (ENSOJAG00000014152)	ENSOJAG00000014032 #22	CFAP410 (ENSOJAG00000014009)	zgc:171772 (ENSOJAG00000013981)	ENSOJAG00000013945	ndufb3 (ENSOJAG00000013922) #20	ENSOJAG00000013828	ENSOJAG00000013801	ENSOJAG00000013649	tmbim1a (ENSOJAG00000013614)	ENSOJAG00000013537	catip (ENSOJAG00000013515)	casp20 (ENSOJAG00000013504)	ENSOJAG00000013493	ENSOJAG00000013481	PCDH8 (ENSOJAG00000013470)	CNMD (ENSOJAG00000013452)
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000163996	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a.n	ENSGT00940000159677.a.a.m	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744
Japanese Medaka HdrR	MODERN SPECIES	8	oxsr1a (ENSORLG00000011811)	ENSORLG00000011776	ENSORLG00000027777	ENSORLG00000011744	ENSORLG00000029173	xirp1 (ENSORLG00000011736)	CSRNP1 (ENSORLG00000011730)	gorasp1a (ENSORLG00000025545)	wdr48b (ENSORLG00000011723)	scn12aa (ENSORLG00000011677)	ENSORLG00000023292	COL6A1 (ENSORLG00000011639)	COL6A2 (ENSORLG00000011584)	zgc:162816 (ENSORLG00000011527)	CFAP410 (ENSORLG00000011489)	ENSORLG00000011520 #22	zgc:171772 (ENSORLG00000011476)	dnai2b (ENSORLG00000011467)	pecr (ENSORLG00000011446)	ndufb3 (ENSORLG00000011424) #20	ENSORLG00000011416	ENSORLG00000011385	ENSORLG00000011337	mcm6 (ENSORLG00000011329)	ENSORLG00000011254	tmbim1a (ENSORLG00000011243)	casp8 (ENSORLG00000011198)	catip (ENSORLG00000011164)	ENSORLG00000011148	ENSORLG00000011139	ENSORLG00000011133
Chinese medaka	MODERN SPECIES	720							CSRNP1 (ENSOSIG00000008386)	gorasp1a (ENSOSIG00000008384)	wdr48b (ENSOSIG00000008360)	ENSOSIG00000008349	scn12aa (ENSOSIG00000008348)	ENSOSIG00000008345	COL6A1 (ENSOSIG00000008343)	COL6A2 (ENSOSIG00000008078)	zgc:162816 (ENSOSIG00000008071)	ENSOSIG00000008069 #22	CFAP410 (ENSOSIG00000008067)	zgc:171772 (ENSOSIG00000008063)	ENSOSIG00000007951	pecr (ENSOSIG00000007947)	ENSOSIG00000007946	mcm6 (ENSOSIG00000007855)	ENSOSIG00000007839	ENSOSIG00000007836	casp20 (ENSOSIG00000007834)	ENSOSIG00000007832	ENSOSIG00000007828	ENSOSIG00000007760	PCDH8 (ENSOSIG00000007758)	CNMD (ENSOSIG00000007756)	sugt1 (ENSOSIG00000007755)
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000177650
Pomacentridae	ANCESTRAL SPECIES	6	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000177650
Pomacentridae_A	ANCESTRAL SPECIES	18								ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000158550	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225.w	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000177650
Amphiprion	ANCESTRAL SPECIES	33	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a.n.a	ENSGT00950000183075.a.a.a.a.m	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00390000008403	ENSGT00940000167655.k	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00940000154411	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225.w	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000177650
Clown anemonefish	MODERN SPECIES	1212									ENSAOCG00000009564	scn12aa (ENSAOCG00000009831)	ENSAOCG00000009885	ENSAOCG00000009891	COL6A1 (ENSAOCG00000009982)	COL6A2 (ENSAOCG00000010061)	zgc:162816 (ENSAOCG00000010099)	ENSAOCG00000010181 #22	ENSAOCG00000010197	zgc:171772 (ENSAOCG00000010205)	pecr (ENSAOCG00000010212)	NDUFB3 (ENSAOCG00000010218) #20	ENSAOCG00000000636	ENSAOCG00000010245	mcm6 (ENSAOCG00000010301)	si:ch73-71c20.5 (ENSAOCG00000010315)	tmbim1a (ENSAOCG00000000645)
Orange clownfish	MODERN SPECIES	1	ENSAPEG00000021222	LIMD2 (ENSAPEG00000021267)	ENSAPEG00000021283	xirp1 (ENSAPEG00000021293)	CSRNP1 (ENSAPEG00000021308)	gorasp1a (ENSAPEG00000021315)	wdr48b (ENSAPEG00000021361)	scn12aa (ENSAPEG00000021441)	ENSAPEG00000021534	ENSAPEG00000021545	ENSAPEG00000021562	COL6A1 (ENSAPEG00000021601)	ENSAPEG00000021652	COL6A2 (ENSAPEG00000021675)	zgc:162816 (ENSAPEG00000021787)	ENSAPEG00000021850 #22	ENSAPEG00000021873	zgc:171772 (ENSAPEG00000021880)	pecr (ENSAPEG00000021896)	NDUFB3 (ENSAPEG00000021914) #20	ENSAPEG00000021908	ENSAPEG00000021921	mcm6 (ENSAPEG00000021954)	si:ch73-71c20.5 (ENSAPEG00000022027)	tmbim1a (ENSAPEG00000022032)	ENSAPEG00000022053	catip (ENSAPEG00000022095)	casp20 (ENSAPEG00000022112)	ENSAPEG00000022148	ENSAPEG00000022155	ENSAPEG00000022164
Spiny chromis	MODERN SPECIES	785			LIMD2 (ENSAPOG00000010698)	ENSAPOG00000010681	xirp1 (ENSAPOG00000010665)	CSRNP1 (ENSAPOG00000001046)	gorasp1a (ENSAPOG00000010640)	wdr48b (ENSAPOG00000010625)	scn12aa (ENSAPOG00000010561)	ENSAPOG00000010500	ENSAPOG00000010489	ENSAPOG00000010471	COL6A1 (ENSAPOG00000010460)	COL6A2 (ENSAPOG00000010321)	zgc:162816 (ENSAPOG00000010209)	ORC2 (ENSAPOG00000010148) #22	CFAP410 (ENSAPOG00000010129)	zgc:171772 (ENSAPOG00000010110)	pecr (ENSAPOG00000010096)	ndufb3 (ENSAPOG00000010052) #20	ENSAPOG00000010026	ENSAPOG00000009861	mcm6 (ENSAPOG00000009829)	si:ch73-71c20.5 (ENSAPOG00000009742)	ENSAPOG00000009732	tmbim1a (ENSAPOG00000009678)
Bicolor damselfish	MODERN SPECIES	798								wdr48b (ENSSPAG00000002976)	scn12aa (ENSSPAG00000003026)	ENSSPAG00000003091	ENSSPAG00000003101	ENSSPAG00000003120	COL6A1 (ENSSPAG00000003136)	COL6A2 (ENSSPAG00000003203)	zgc:162816 (ENSSPAG00000003248)	ENSSPAG00000003306 #22	ENSSPAG00000003328	zgc:171772 (ENSSPAG00000003346)	pecr (ENSSPAG00000003362)	ndufb3 (ENSSPAG00000003377) #20	ENSSPAG00000003512	ENSSPAG00000006307	mcm6 (ENSSPAG00000006313)	tecrb (ENSSPAG00000006381)	dnajb1b (ENSSPAG00000006458)	ENSSPAG00000006486	ENSSPAG00000006501	ENSSPAG00000006511	ENSSPAG00000006526	DNM2 (ENSSPAG00000006561)	tmed1b (ENSSPAG00000006621)
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000153582.a.n	ENSGT00940000162179.e.b.a.a.b	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.i	ENSGT00390000006290	ENSGT00940000177650	ENSGT00940000155219.hb.a	ENSGT00480000042679.b.b	ENSGT00390000013700
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000153582.a.n	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882.q	ENSGT00940000156882.r	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.j.a	ENSGT00940000154101.a	ENSGT00940000164225.u	ENSGT00390000006290	ENSGT00940000177650
Nile tilapia	MODERN SPECIES	9	ENSONIG00000041634	ENSONIG00000034534	ENSONIG00000034673	xirp1 (ENSONIG00000015621)	CSRNP1 (ENSONIG00000015623)	gorasp1a (ENSONIG00000015625)	wdr48b (ENSONIG00000015628)	scn12aa (ENSONIG00000015630)	ENSONIG00000030484	ENSONIG00000042464	ENSONIG00000041590	COL6A1 (ENSONIG00000015644)	ENSONIG00000040009	COL6A2 (ENSONIG00000015650)	zgc:162816 (ENSONIG00000034736)	ENSONIG00000015654 #22	ENSONIG00000032347	cfap410 (ENSONIG00000040731)	zgc:171772 (ENSONIG00000033651)	pecr (ENSONIG00000035602)	ENSONIG00000015663	ndufb3 (ENSONIG00000031322) #20	ENSONIG00000042403	ENSONIG00000015664	mcm6 (ENSONIG00000015669)	ENSONIG00000040121	tmbim1a (ENSONIG00000015676)	ENSONIG00000015679	catip (ENSONIG00000015684)	ENSONIG00000015686	ENSONIG00000036398
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b.a.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT00940000153582.a.n	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882.q	ENSGT00940000159677.a.a	ENSGT00940000156882.r	ENSGT00390000010316 #20	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.j.a	ENSGT00940000154101.a.e	ENSGT00940000164225.u	ENSGT00940000166591.j.b.b	ENSGT01030000234768.a.a.b
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b.a.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882.q	ENSGT00940000159677.a.a	ENSGT00940000156882.r	ENSGT00390000010316 #20	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055.c.a	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.j.a	ENSGT00940000154101.a.e	ENSGT00940000164225.u.b	ENSGT00940000166591.j.b.b	ENSGT01030000234768.a.a.b
Burton s mouthbrooder	MODERN SPECIES	429	plcd1b (ENSHBUG00000023335)	oxsr1a (ENSHBUG00000023265)	ENSHBUG00000023165	ENSHBUG00000023128	ENSHBUG00000023045	CSRNP1 (ENSHBUG00000023036)	gorasp1a (ENSHBUG00000023027)	wdr48b (ENSHBUG00000023018)	scn12aa (ENSHBUG00000022942)	ENSHBUG00000022877	ENSHBUG00000022867	ENSHBUG00000022853	COL6A1 (ENSHBUG00000022833)	COL6A2 (ENSHBUG00000022632)	zgc:162816 (ENSHBUG00000022605)	ENSHBUG00000022578 #22	CFAP410 (ENSHBUG00000022556)	zgc:171772 (ENSHBUG00000022542)
Haplochromini_A	ANCESTRAL SPECIES	48	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b.a.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882.q	ENSGT00940000159677.a.a.q	ENSGT00940000156882.r	ENSGT00390000010316 #20	ENSGT00940000159677.a.a.r	ENSGT00940000155899.e.b.f	ENSGT00940000156209.v.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055.d	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.j.a	ENSGT00940000154101.a.e.b
P. nyererei	MODERN SPECIES	393	ENSPNYG00000017398	ENSPNYG00000017367	LIMD2 (ENSPNYG00000017354)	xirp1 (ENSPNYG00000017345)	CSRNP1 (ENSPNYG00000017336)	gorasp1a (ENSPNYG00000017323)	wdr48b (ENSPNYG00000017261)	ENSPNYG00000017250	scn12aa (ENSPNYG00000017194)	ENSPNYG00000017178	ENSPNYG00000017164	COL6A1 (ENSPNYG00000017103)	ENSPNYG00000017081	COL6A2 (ENSPNYG00000017040)	zgc:162816 (ENSPNYG00000016998)	ENSPNYG00000016961 #22	CFAP410 (ENSPNYG00000016941)	zgc:171772 (ENSPNYG00000016933)	pecr (ENSPNYG00000016916)	ndufb3 (ENSPNYG00000016905) #20	ENSPNYG00000016881	dnai4 (ENSPNYG00000016758)	ENSPNYG00000016703	mcm6 (ENSPNYG00000016641)	si:ch73-71c20.5 (ENSPNYG00000016615)	tmbim1a (ENSPNYG00000016601)	ENSPNYG00000016559	catip (ENSPNYG00000016518)
Haplochromini_B	ANCESTRAL SPECIES	52	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b.a.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000176919	ENSGT00940000154992.a.a	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000018807	ENSGT00390000015228 #22	ENSGT00390000016988.b	ENSGT00940000156882.q	ENSGT00940000159677.a.a.q	ENSGT00940000156882.r	ENSGT00390000010316 #20	ENSGT00940000159677.a.a.r	ENSGT00940000155899.e.b.f	ENSGT00940000156209.v.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055.d	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591.j.a.a	ENSGT00940000154101.a.e.b	ENSGT00940000164225.u.a.b
Eastern happy	MODERN SPECIES	9	ENSACLG00000018768	ENSACLG00000018675	LIMD2 (ENSACLG00000018657)	xirp1 (ENSACLG00000018649)	CSRNP1 (ENSACLG00000018641)	gorasp1a (ENSACLG00000018625)	wdr48b (ENSACLG00000018554)	ENSACLG00000018546	scn12aa (ENSACLG00000018397)	ENSACLG00000018382	ENSACLG00000018372	ENSACLG00000018357	COL6A2 (ENSACLG00000018257)	zgc:162816 (ENSACLG00000018166)	CFAP410 (ENSACLG00000018102)	ENSACLG00000018079 #22	zgc:171772 (ENSACLG00000018074)	pecr (ENSACLG00000017995)	ENSACLG00000017946	ENSACLG00000017892	ENSACLG00000017881	pecr (ENSACLG00000017843)	ndufb3 (ENSACLG00000017834) #20	ENSACLG00000017673	ENSACLG00000017664	dnai4 (ENSACLG00000017642)	ENSACLG00000017624	mcm6 (ENSACLG00000017551)	si:ch73-71c20.5 (ENSACLG00000017533)	tmbim1a (ENSACLG00000017510)	ENSACLG00000017484
Zebra mbuna	MODERN SPECIES	1100	ENSMZEG00005011546	LIMD2 (ENSMZEG00005011525)	xirp1 (ENSMZEG00005011519)	CSRNP1 (ENSMZEG00005011512)	gorasp1a (ENSMZEG00005011497)	wdr48b (ENSMZEG00005011470)	scn12aa (ENSMZEG00005011449)	ENSMZEG00005011430	ENSMZEG00005011421	COL6A1 (ENSMZEG00005011386)	ENSMZEG00005011371	COL6A2 (ENSMZEG00005011331)	ENSMZEG00005011275	zgc:162816 (ENSMZEG00005011238)	CFAP410 (ENSMZEG00005011225)	ENSMZEG00005011216 #22	zgc:171772 (ENSMZEG00005011203)	pecr (ENSMZEG00005011199)	ENSMZEG00005011194	pecr (ENSMZEG00005011186)	ndufb3 (ENSMZEG00005011181) #20	ENSMZEG00005011169	dnai4 (ENSMZEG00005011154)	ENSMZEG00005011138	mcm6 (ENSMZEG00005011109)	si:ch73-71c20.5 (ENSMZEG00005011092)	tmbim1a (ENSMZEG00005011084)	ENSMZEG00005011051	catip (ENSMZEG00005011036)	casp20 (ENSMZEG00005011021)	ENSMZEG00005011006
Lyretail cichlid	MODERN SPECIES	385	ENSNBRG00000016518	ENSNBRG00000016420	xirp1 (ENSNBRG00000016397)	CSRNP1 (ENSNBRG00000016389)	gorasp1a (ENSNBRG00000016373)	wdr48b (ENSNBRG00000016326)	ENSNBRG00000016299	ENSNBRG00000016285	scn12aa (ENSNBRG00000016232)	ENSNBRG00000016215	ENSNBRG00000016199	ENSNBRG00000016192	COL6A1 (ENSNBRG00000016134)	COL6A2 (ENSNBRG00000016081)	zgc:162816 (ENSNBRG00000016049)	ORC2 (ENSNBRG00000015996) #22	CFAP410 (ENSNBRG00000015978)	zgc:171772 (ENSNBRG00000015974)	pecr (ENSNBRG00000015935)	pecr (ENSNBRG00000015880)	ndufb3 (ENSNBRG00000015867) #20	ENSNBRG00000015856	dnai4 (ENSNBRG00000015805)	mcm6 (ENSNBRG00000015764)	si:ch73-71c20.5 (ENSNBRG00000015752)	tmbim1a (ENSNBRG00000015690)	ENSNBRG00000015572	catip (ENSNBRG00000015541)
Midas cichlid	MODERN SPECIES	733	ENSACIG00000011103	tfr1a (ENSACIG00000011065)	tfr1a (ENSACIG00000010981)	ENSACIG00000010959	xirp1 (ENSACIG00000010945)	CSRNP1 (ENSACIG00000010903)	gorasp1a (ENSACIG00000010870)	wdr48b (ENSACIG00000010825)	ENSACIG00000010815	scn12aa (ENSACIG00000010766)	ENSACIG00000010752	ENSACIG00000010739	COL6A1 (ENSACIG00000010609)	COL6A2 (ENSACIG00000010522)	zgc:162816 (ENSACIG00000010483)	ENSACIG00000010403 #22	CFAP410 (ENSACIG00000010322)	zgc:171772 (ENSACIG00000010196)	pecr (ENSACIG00000010130)	ndufb3 (ENSACIG00000010119) #20	ENSACIG00000008543	ENSACIG00000008421	mcm6 (ENSACIG00000008382)	si:ch73-71c20.5 (ENSACIG00000008367)	tmbim1a (ENSACIG00000008344)	ENSACIG00000008140	catip (ENSACIG00000008018)	ENSACIG00000007935
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01100000263519.A.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Seriola	ANCESTRAL SPECIES		ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a.bb	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Greater amberjack	MODERN SPECIES	83	ENSSDUG00000001206	ENSSDUG00000001235	ENSSDUG00000001266	LIMD2 (ENSSDUG00000001356)	xirp1 (ENSSDUG00000001373)	CSRNP1 (ENSSDUG00000001380)	gorasp1a (ENSSDUG00000001395)	wdr48b (ENSSDUG00000001411)	scn12aa (ENSSDUG00000001440)	ENSSDUG00000001563	ENSSDUG00000001571	ENSSDUG00000001579	COL6A1 (ENSSDUG00000001601)	COL6A2 (ENSSDUG00000001666)	zgc:162816 (ENSSDUG00000001729)	ENSSDUG00000001777 #22	CFAP410 (ENSSDUG00000001849)	zgc:171772 (ENSSDUG00000001871)	pecr (ENSSDUG00000001914)	ENSSDUG00000002092	ndufb3 (ENSSDUG00000003670) #20	ENSSDUG00000003772	ENSSDUG00000004541	mcm6 (ENSSDUG00000004616)	si:ch73-71c20.5 (ENSSDUG00000004646)	ENSSDUG00000004661	ENSSDUG00000004716	catip (ENSSDUG00000004956)	ENSSDUG00000004989	ENSSDUG00000005060	PCDH8 (ENSSDUG00000005067)
Yellowtail amberjack	MODERN SPECIES	3040	ENSSLDG00000002760	ENSSLDG00000003177	ENSSLDG00000003192	ENSSLDG00000003289	xirp1 (ENSSLDG00000003326)	CSRNP1 (ENSSLDG00000003389)	gorasp1a (ENSSLDG00000003404)	wdr48b (ENSSLDG00000003419)	scn12aa (ENSSLDG00000003505)	ENSSLDG00000003581	ENSSLDG00000003601	ENSSLDG00000003627	COL6A1 (ENSSLDG00000003661)	COL6A2 (ENSSLDG00000003892)	zgc:162816 (ENSSLDG00000003940)	ENSSLDG00000004011 #22	ENSSLDG00000004107	zgc:171772 (ENSSLDG00000004137)	pecr (ENSSLDG00000004153)	ndufb3 (ENSSLDG00000004168) #20	ENSSLDG00000004228	ENSSLDG00000004266	mcm6 (ENSSLDG00000004301)	si:ch73-71c20.5 (ENSSLDG00000004439)	tmbim1a (ENSSLDG00000004383)	casp8 (ENSSLDG00000004467)	catip (ENSSLDG00000004538)	ENSSLDG00000004567	ENSSLDG00000004580	ENSSLDG00000004613	PCDH8 (ENSSLDG00000004654)
Barramundi perch	MODERN SPECIES	69	ENSLCAG00010005139	ENSLCAG00010005135	ENSLCAG00010005129	ENSLCAG00010005125	ENSLCAG00010005120	CSRNP1 (ENSLCAG00010005117)	gorasp1a (ENSLCAG00010005112)	wdr48b (ENSLCAG00010005070)	ENSLCAG00010005046	scn12aa (ENSLCAG00010005031)	ENSLCAG00010004999	ENSLCAG00010004993	COL6A1 (ENSLCAG00010004981)	COL6A2 (ENSLCAG00010004372)	zgc:162816 (ENSLCAG00010004229)	ENSLCAG00010004223 #22	ENSLCAG00010004220	zgc:171772 (ENSLCAG00010004217)	pecr (ENSLCAG00010004212)	ndufb3 (ENSLCAG00010004204) #20	ENSLCAG00010004198	ENSLCAG00010004193	mcm6 (ENSLCAG00010004114)	tmbim1a (ENSLCAG00010004084)	ENSLCAG00010004041	catip (ENSLCAG00010004011)	ENSLCAG00010004006	ENSLCAG00010004002	ENSLCAG00010003996	PCDH8 (ENSLCAG00010003994)	CNMD (ENSLCAG00010003989)
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00530000063629.b.d	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b.c	ENSGT00940000154607.b.b.d	ENSGT00940000158377.b.i.b	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00390000006290	ENSGT00940000155219.hb.a	ENSGT00480000042679.b.b
Tongue sole	MODERN SPECIES	12	ENSCSEG00000009460	klhl40a (ENSCSEG00000009445)	hhatla (ENSCSEG00000009423)	ctdsplb (ENSCSEG00000009394)	plcd1b (ENSCSEG00000009190)	oxsr1a (ENSCSEG00000009121)	ENSCSEG00000009110	gorasp1a (ENSCSEG00000009096)	wdr48b (ENSCSEG00000009078)	scn12aa (ENSCSEG00000009036)	COL6A2 (ENSCSEG00000008970)	COL6A1 (ENSCSEG00000008939)	ENSCSEG00000008906	zgc:162816 (ENSCSEG00000008880)	ENSCSEG00000008869	ENSCSEG00000008857 #22	CFAP410 (ENSCSEG00000008848)	zgc:171772 (ENSCSEG00000008838)	pecr (ENSCSEG00000008830)	NDUFB3 (ENSCSEG00000008825) #20	ENSCSEG00000018910	mcm6 (ENSCSEG00000018899)	ENSCSEG00000018895	tmbim1a (ENSCSEG00000018889)	ENSCSEG00000018879	ENSCSEG00000018871	ENSCSEG00000018865	PCDH8 (ENSCSEG00000018861)	CNMD (ENSCSEG00000018849)	sugt1 (ENSCSEG00000018819)	ENSCSEG00000018803
Turbot	MODERN SPECIES	19	ctdsplb (ENSSMAG00000013641)	plcd1b (ENSSMAG00000013538)	oxsr1a (ENSSMAG00000013455)	ENSSMAG00000013341	ENSSMAG00000013327	CSRNP1 (ENSSMAG00000013318)	gorasp1a (ENSSMAG00000013296)	WDR48 (ENSSMAG00000013263)	SCN10A (ENSSMAG00000013220)	ENSSMAG00000030075	ENSSMAG00000025581	ENSSMAG00000013204	ENSSMAG00000013078	ENSSMAG00000012981	ENSSMAG00000012959	ENSSMAG00000012921 #22	ENSSMAG00000024744	zgc:171772 (ENSSMAG00000012875)	ENSSMAG00000012806	ENSSMAG00000036173 #20	ENSSMAG00000012795	ENSSMAG00000012773	mcm6 (ENSSMAG00000012730)	ENSSMAG00000012699	tmbim1a (ENSSMAG00000012690)	ENSSMAG00000012669	ENSSMAG00000012660	ENSSMAG00000012651	ENSSMAG00000012642	ENSSMAG00000023466	PCDH8 (ENSSMAG00000012636)
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Zig-zag eel	MODERN SPECIES	8	ENSMAMG00000016861	ENSMAMG00000016916	ENSMAMG00000016902	ENSMAMG00000016969	CSRNP1 (ENSMAMG00000016973)	gorasp1a (ENSMAMG00000016979)	WDR48 (ENSMAMG00000016995)	SCN10A (ENSMAMG00000017042)	ENSMAMG00000028043	ENSMAMG00000027278	ENSMAMG00000017107	ENSMAMG00000017115	ENSMAMG00000017127	ENSMAMG00000017153	ENSMAMG00000017206	ENSMAMG00000017247 #22	ENSMAMG00000017254	RPL37A (ENSMAMG00000025523)	ENSMAMG00000017299	ENSMAMG00000017310 #20	ENSMAMG00000025990	ENSMAMG00000017350	ENSMAMG00000017381	mcm6 (ENSMAMG00000017407)	ENSMAMG00000024961	tmbim1a (ENSMAMG00000017445)	ENSMAMG00000017473	ENSMAMG00000017490	ENSMAMG00000017528	ENSMAMG00000026814	ENSMAMG00000017560
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Climbing perch	MODERN SPECIES	8	ENSATEG00000006424	xirp1 (ENSATEG00000006360)	ENSATEG00000006184	ENSATEG00000029990	xirp1 (ENSATEG00000029308)	CSRNP1 (ENSATEG00000006172)	gorasp1a (ENSATEG00000006157)	WDR48 (ENSATEG00000006052)	SCN10A (ENSATEG00000005946)	ENSATEG00000028156	ENSATEG00000005936	ENSATEG00000027770	ENSATEG00000005497	ENSATEG00000005475	ENSATEG00000005444	ENSATEG00000005434 #22	ENSATEG00000005382	zgc:171772 (ENSATEG00000026179)	ENSATEG00000005362	ENSATEG00000026294 #20	ENSATEG00000004305	ENSATEG00000004834	ENSATEG00000004241	mcm6 (ENSATEG00000004164)	ENSATEG00000025336	tmbim1a (ENSATEG00000004076)	ENSATEG00000004046	ENSATEG00000003962	ENSATEG00000003956	ENSATEG00000003950	ENSATEG00000003945
Siamese fighting fish	MODERN SPECIES	8	COL6A2 (ENSBSLG00000023941)	ENSBSLG00000024029	ENSBSLG00000024040	ENSBSLG00000024042	ENSBSLG00000024045	ENSBSLG00000024049	ENSBSLG00000024051	ENSBSLG00000024053	ENSBSLG00000024056	ENSBSLG00000024057	ENSBSLG00000024058	ENSBSLG00000024059	ENSBSLG00000024062	ENSBSLG00000024064	zgc:162816 (ENSBSLG00000024069)	ENSBSLG00000024076 #22	CFAP410 (ENSBSLG00000024207)	zgc:171772 (ENSBSLG00000024214)	kifap3b (ENSBSLG00000024251)	ENSBSLG00000024731	ENSBSLG00000024739	OLFML2B (ENSBSLG00000024746)	dusp12 (ENSBSLG00000024754)	prg4a (ENSBSLG00000024773)	odr4 (ENSBSLG00000024872)	dpydb (ENSBSLG00000024910)	ENSBSLG00000025384	ENSBSLG00000025402	stk11 (ENSBSLG00000025416)	SUGP1 (ENSBSLG00000025481)	rnf126 (ENSBSLG00000025588)
Eupercaria	ANCESTRAL SPECIES	22	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Ballan wrasse	MODERN SPECIES	10	ENSLBEG00000003414	CSRNP1 (ENSLBEG00000003436)	gorasp1a (ENSLBEG00000003456)	wdr48b (ENSLBEG00000003484)	ENSLBEG00000003551	scn12aa (ENSLBEG00000003585)	ENSLBEG00000003689	ENSLBEG00000003714	ENSLBEG00000003724	angptl6 (ENSLBEG00000003756)	ENSLBEG00000003817	ENSLBEG00000003845	COL6A1 (ENSLBEG00000003883)	COL6A2 (ENSLBEG00000003980)	zgc:162816 (ENSLBEG00000004144)	ENSLBEG00000004202 #22	CFAP410 (ENSLBEG00000004239)	zgc:171772 (ENSLBEG00000004282)	pecr (ENSLBEG00000004318)	ndufb3 (ENSLBEG00000004336) #20	ENSLBEG00000004369	ENSLBEG00000004389	mcm6 (ENSLBEG00000004424)	ENSLBEG00000004475	tmbim1a (ENSLBEG00000004490)	ENSLBEG00000004518	catip (ENSLBEG00000004572)	ENSLBEG00000004605	ENSLBEG00000004657	CXorf38 (ENSLBEG00000004672)	PCDH8 (ENSLBEG00000004693)
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Cottioidei	ANCESTRAL SPECIES	15	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00530000066553	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290
Stickleback	MODERN SPECIES	2	klhl40a (ENSGACG00000012831)	hhatla (ENSGACG00000012795)	ctdsplb (ENSGACG00000012774)	plcd1b (ENSGACG00000012708)	oxsr1a (ENSGACG00000012674)	ENSGACG00000012667	xirp1 (ENSGACG00000012663)	CSRNP1 (ENSGACG00000012661)	gorasp1a (ENSGACG00000012659)	wdr48b (ENSGACG00000012625)	scn12aa (ENSGACG00000012613)	ENSGACG00000012611	COL6A1 (ENSGACG00000012576)	COL6A2 (ENSGACG00000012518)	zgc:162816 (ENSGACG00000012508)	ENSGACG00000012499 #22	CFAP410 (ENSGACG00000012486)	zgc:171772 (ENSGACG00000012484)	pecr (ENSGACG00000012451)	ndufb3 (ENSGACG00000012447) #20	ugt1b5 (ENSGACG00000012390)	ENSGACG00000012387	ENSGACG00000012386	mcm6 (ENSGACG00000012377)	si:ch73-71c20.5 (ENSGACG00000012375)	tmbim1a (ENSGACG00000012369)
Lumpfish	MODERN SPECIES	8	ENSCLMG00005014310	ENSCLMG00005014313	ENSCLMG00005014391	LIMD2 (ENSCLMG00005014395)	xirp1 (ENSCLMG00005014396)	CSRNP1 (ENSCLMG00005014397)	gorasp1a (ENSCLMG00005014398)	wdr48b (ENSCLMG00005014412)	scn12aa (ENSCLMG00005014617)	ENSCLMG00005014618	ENSCLMG00005014620	ENSCLMG00005014621	ENSCLMG00005014623	COL6A2 (ENSCLMG00005014624)	zgc:162816 (ENSCLMG00005014838)	ENSCLMG00005014840 #22	ENSCLMG00005014860	zgc:171772 (ENSCLMG00005014863)	pecr (ENSCLMG00005014866)	ndufb3 (ENSCLMG00005014867) #20	ENSCLMG00005014869	ENSCLMG00005014871	mcm6 (ENSCLMG00005014873)	ENSCLMG00005014898	tmbim1a (ENSCLMG00005014899)	ENSCLMG00005014902	catip (ENSCLMG00005014904)	ENSCLMG00005014908	ENSCLMG00005014909	ENSCLMG00005014911	PCDH8 (ENSCLMG00005014912)
Perciformes_a	ANCESTRAL SPECIES	24	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00390000006290	ENSGT00940000155219.hb.a	ENSGT00480000042679.b.b
Pike perch	MODERN SPECIES	207	oxsr1a (ENSSLUG00000014539)	ENSSLUG00000014805	ENSSLUG00000014818	xirp1 (ENSSLUG00000014842)	CSRNP1 (ENSSLUG00000014848)	gorasp1a (ENSSLUG00000014854)	wdr48b (ENSSLUG00000014871)	scn12aa (ENSSLUG00000014941)	ENSSLUG00000002940	ENSSLUG00000002952	ENSSLUG00000002985	COL6A1 (ENSSLUG00000002999)	COL6A2 (ENSSLUG00000003127)	zgc:162816 (ENSSLUG00000003494)	ENSSLUG00000003504	ENSSLUG00000003566 #22	ENSSLUG00000004098	zgc:171772 (ENSSLUG00000004219)	pecr (ENSSLUG00000004227)	ndufb3 (ENSSLUG00000004240) #20	ENSSLUG00000004303	ENSSLUG00000004843	ENSSLUG00000004889	mcm6 (ENSSLUG00000004893)	si:ch73-71c20.5 (ENSSLUG00000004905)	tmbim1a (ENSSLUG00000004916)	casp8 (ENSSLUG00000004946)	catip (ENSSLUG00000004969)	ENSSLUG00000004973	ENSSLUG00000004977	PCDH8 (ENSSLUG00000004989)
Channel bull blenny	MODERN SPECIES	8	oxsr1a (ENSCGOG00000010042)	ENSCGOG00000010051	ENSCGOG00000010053	ENSCGOG00000010054	xirp1 (ENSCGOG00000010056)	CSRNP1 (ENSCGOG00000010058)	gorasp1a (ENSCGOG00000010063)	wdr48b (ENSCGOG00000010075)	scn12aa (ENSCGOG00000010653)	ENSCGOG00000011534	ENSCGOG00000011536	ENSCGOG00000011537	COL6A1 (ENSCGOG00000011545)	COL6A2 (ENSCGOG00000011581)	zgc:162816 (ENSCGOG00000011629)	ENSCGOG00000011645 #22	ENSCGOG00000012027	zgc:171772 (ENSCGOG00000012030)	pecr (ENSCGOG00000012036)	ndufb3 (ENSCGOG00000012039) #20	ENSCGOG00000012043	ENSCGOG00000012138	mcm6 (ENSCGOG00000012197)	TMBIM1 (ENSCGOG00000013454)	casp8 (ENSCGOG00000013460)	catip (ENSCGOG00000013520)	ENSCGOG00000013523	ENSCGOG00000013528	PCDH8 (ENSCGOG00000013531)	CNMD (ENSCGOG00000013533)	sugt1 (ENSCGOG00000013536)
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT00940000156207.b.c.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.d	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000154607.b.b.c.c.b	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT00940000176919	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00940000168744	ENSGT00390000006290	ENSGT00940000155219.hb.a
European seabass	MODERN SPECIES		ENSDLAG00005023410	ENSDLAG00005023419	ENSDLAG00005026605	xirp1 (ENSDLAG00005030566)	CSRNP1 (ENSDLAG00005034486)	gorasp1a (ENSDLAG00005023436)	WDR48 (ENSDLAG00005023445)	SCN10A (ENSDLAG00005023531)	ENSDLAG00005023879	ENSDLAG00005034014	ENSDLAG00005023884	ENSDLAG00005023888	ENSDLAG00005033968	ENSDLAG00005023911	ENSDLAG00005024052	ENSDLAG00005024073 #22	ENSDLAG00005029086	zgc:171772 (ENSDLAG00005024258)	ENSDLAG00005024261	ENSDLAG00005034460 #20	ENSDLAG00005033709	ENSDLAG00005024273	ENSDLAG00005024278	ENSDLAG00005030522	ENSDLAG00005024300	ENSDLAG00005024364	ENSDLAG00005034463	ENSDLAG00005024370	ENSDLAG00005028336	ENSDLAG00005024373	PCDH8 (ENSDLAG00005024377)
Large yellow croaker	MODERN SPECIES	481	oxsr1a (ENSLCRG00005000387)	ENSLCRG00005000263	ENSLCRG00005000256	LIMD2 (ENSLCRG00005000250)	xirp1 (ENSLCRG00005000239)	CSRNP1 (ENSLCRG00005022745)	gorasp1a (ENSLCRG00005022744)	wdr48b (ENSLCRG00005022729)	ENSLCRG00005022723	scn12aa (ENSLCRG00005016742)	ENSLCRG00005016652	ENSLCRG00005016651	COL6A1 (ENSLCRG00005016650)	COL6A2 (ENSLCRG00005013465)	zgc:162816 (ENSLCRG00005013426)	ENSLCRG00005013406 #22	ENSLCRG00005013405	zgc:171772 (ENSLCRG00005013403)	pecr (ENSLCRG00005013401)	ndufb3 (ENSLCRG00005013397) #20	ENSLCRG00005013396	ENSLCRG00005013394	mcm6 (ENSLCRG00005013382)	ENSLCRG00005013379	tmbim1a (ENSLCRG00005013376)	ENSLCRG00005013373	ENSLCRG00005013372	ENSLCRG00005013371	ENSLCRG00005013366	ENSLCRG00005013363	PCDH8 (ENSLCRG00005013361)
Gilthead seabream	MODERN SPECIES	13	ENSSAUG00010024094	ENSSAUG00010024096	ENSSAUG00010024098	rpl36 (ENSSAUG00010024100)	ENSSAUG00010024101	CSRNP1 (ENSSAUG00010024102)	gorasp1a (ENSSAUG00010024103)	wdr48b (ENSSAUG00010024104)	scn12aa (ENSSAUG00010024161)	ENSSAUG00010025202	ENSSAUG00010025204	ENSSAUG00010025207	COL6A1 (ENSSAUG00010025210)	COL6A2 (ENSSAUG00010025268)	zgc:162816 (ENSSAUG00010025838)	ENSSAUG00010025841 #22	ENSSAUG00010025844	zgc:171772 (ENSSAUG00010025846)	pecr (ENSSAUG00010025847)	NDUFB3 (ENSSAUG00010025848) #20	ENSSAUG00010025856	ENSSAUG00010002800	mcm6 (ENSSAUG00010002843)	tmbim1a (ENSSAUG00010002960)	ENSSAUG00010003126	catip (ENSSAUG00010003163)	ENSSAUG00010003169	ENSSAUG00010003175	ENSSAUG00010003184	ENSSAUG00010003192	dcun1d1 (ENSSAUG00010003208)
Tetraodontidae	ANCESTRAL SPECIES	13	ENSGT00530000063629.b.d	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000158392.e.a	ENSGT00940000154621.a.b.b.b	ENSGT00940000154607.b.b.c.c.a	ENSGT00940000158377.b.i.b	ENSGT00530000063779.B.a	ENSGT00950000183072.a.a.b	ENSGT00390000008686.c.c	ENSGT00920000149157.c	ENSGT00940000154992.a.a	ENSGT01030000234576.D.a.a.b.b	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT01050000244848.C.b	ENSGT01050000244824.D.b	ENSGT00530000065055	ENSGT01050000244890.a.b.a.i.a	ENSGT00940000166591	ENSGT00940000154101.a	ENSGT00940000164225	ENSGT00390000006290	ENSGT00940000155219.hb.a	ENSGT00480000042679.b.b
Fugu	MODERN SPECIES	14	klhl40a (ENSTRUG00000008522)	hhatla (ENSTRUG00000027448)	ctdsplb (ENSTRUG00000008918)	plcd1b (ENSTRUG00000009158)	oxsr1a (ENSTRUG00000009412)	ENSTRUG00000026144	ENSTRUG00000027864	CSRNP1 (ENSTRUG00000006981)	gorasp1a (ENSTRUG00000006956)	wdr48b (ENSTRUG00000006525)	scn12aa (ENSTRUG00000005719)	ENSTRUG00000025717	COL6A1 (ENSTRUG00000005091)	COL6A2 (ENSTRUG00000004264)	zgc:162816 (ENSTRUG00000024619)	ENSTRUG00000003785 #22	ENSTRUG00000031772	zgc:171772 (ENSTRUG00000003459)	pecr (ENSTRUG00000003174)	ndufb3 (ENSTRUG00000025720) #20	ENSTRUG00000025427	ENSTRUG00000010667	mcm6 (ENSTRUG00000010252)	ENSTRUG00000021265	tmbim1a (ENSTRUG00000010108)	ENSTRUG00000009742	ENSTRUG00000009662	ENSTRUG00000009617	ENSTRUG00000009599	PCDH8 (ENSTRUG00000009481)	CNMD (ENSTRUG00000009328)
Tetraodon	MODERN SPECIES	6	klhl40a (ENSTNIG00000007926)	hhatla (ENSTNIG00000007925)	ctdsplb (ENSTNIG00000007924)	plcd1b (ENSTNIG00000007923)	oxsr1a (ENSTNIG00000007922)	ENSTNIG00000007921	xirp1 (ENSTNIG00000007920)	CSRNP1 (ENSTNIG00000007919)	gorasp1a (ENSTNIG00000007918)	wdr48b (ENSTNIG00000007917)	scn12aa (ENSTNIG00000007916)	ENSTNIG00000001343	COL6A1 (ENSTNIG00000007915)	COL6A2 (ENSTNIG00000007914)	zgc:162816 (ENSTNIG00000007913)	ORC2 (ENSTNIG00000007912) #22	ENSTNIG00000007911	zgc:171772 (ENSTNIG00000007910)	pecr (ENSTNIG00000007909)	ndufb3 (ENSTNIG00000007908) #20	ENSTNIG00000007907	ENSTNIG00000007906	mcm6 (ENSTNIG00000007905)	si:ch73-71c20.5 (ENSTNIG00000007904)	tmbim1a (ENSTNIG00000007903)	ENSTNIG00000007902	ENSTNIG00000000751	PCDH8 (ENSTNIG00000007901)	CNMD (ENSTNIG00000007900)	sugt1 (ENSTNIG00000007899)	ENSTNIG00000007898
Pinecone sodierfish	MODERN SPECIES	8	plcd1b (ENSMMDG00005017096)	oxsr1a (ENSMMDG00005016901)	ENSMMDG00005016889	ENSMMDG00005016886	LIMD2 (ENSMMDG00005016885)	xirp1 (ENSMMDG00005016881)	CSRNP1 (ENSMMDG00005016879)	gorasp1a (ENSMMDG00005016875)	wdr48b (ENSMMDG00005015406)	scn12aa (ENSMMDG00005015383)	ENSMMDG00005015379	ENSMMDG00005015376	COL6A1 (ENSMMDG00005015371)	COL6A2 (ENSMMDG00005015369)	zgc:162816 (ENSMMDG00005015366)	ENSMMDG00005015043 #22	CFAP410 (ENSMMDG00005015027)	zgc:171772 (ENSMMDG00005015025)	pecr (ENSMMDG00005015011)	ndufb3 (ENSMMDG00005015005) #20	ENSMMDG00005013411	ENSMMDG00005012849	ENSMMDG00005012829	mcm6 (ENSMMDG00005012777)	si:ch73-71c20.5 (ENSMMDG00005012769)	tmbim1a (ENSMMDG00005011981)	casp8 (ENSMMDG00005011972)	catip (ENSMMDG00005011969)	ENSMMDG00005011967	ENSMMDG00005011962	ENSMMDG00005011958
Cod	MODERN SPECIES	21	ENSGMOG00000027708	ENSGMOG00000002060	ENSGMOG00000024600	ENSGMOG00000032861	CSRNP1 (ENSGMOG00000029051)	gorasp1a (ENSGMOG00000004430)	WDR48 (ENSGMOG00000004400)	ENSGMOG00000035026	SCN10A (ENSGMOG00000004332)	ENSGMOG00000029459	ENSGMOG00000033354	ENSGMOG00000032344	ENSGMOG00000027364	ENSGMOG00000004197	ENSGMOG00000004173	ENSGMOG00000004135 #22	ENSGMOG00000004116	zgc:171772 (ENSGMOG00000031332)	ENSGMOG00000004088	ENSGMOG00000004078 #20	ENSGMOG00000001881	ENSGMOG00000012635	mcm6 (ENSGMOG00000004027)	ENSGMOG00000030136	tmbim1a (ENSGMOG00000003982)	ENSGMOG00000024183	ENSGMOG00000008471	ENSGMOG00000032452	ENSGMOG00000034524	ENSGMOG00000030246	ENSGMOG00000027381
Protacanthopterygii	ANCESTRAL SPECIES	32	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00390000006876	ENSGT00940000156470.v.a	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b	ENSGT00940000154149.b.a.g.a	ENSGT00940000154499	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228 #22	ENSGT00390000018807	ENSGT00390000016988.a.a.b	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316 #20	ENSGT00940000159677.a.a	ENSGT00940000163427.d	ENSGT00390000004859.c.b	ENSGT00940000160141.e.a	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157362.c	ENSGT00940000154044.a.a.q.b	ENSGT01090000260052.a.b.i	ENSGT01090000260052.a.a.a.a	ENSGT00940000155331.A.f
Salmoninae	ANCESTRAL SPECIES																	ENSGT00390000015228 #22
Salmoninae_a	ANCESTRAL SPECIES	51				ENSGT00940000159123.a	ENSGT00390000003289.m.a	ENSGT00940000157341.g	ENSGT00550000074817.v	ENSGT00450000040296	ENSGT00940000159827.e	ENSGT01090000260052.a.b.i	ENSGT01100000263556.a.a.p.a	ENSGT00950000183014.f.b.b.a.b	ENSGT00390000010316 #20	ENSGT00940000156882	ENSGT00390000016988.b	ENSGT00390000015228 #22	ENSGT00390000018786	ENSGT00940000155682.g.b.c	ENSGT00940000154149.b.a.g.a	ENSGT00390000003574.b	ENSGT00940000159466.f	ENSGT00390000005318.a.a.b	ENSGT00940000156470.u.b.d	ENSGT00940000154587.a.b.v	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000160852	ENSGT00940000159923	ENSGT00390000012433.b.b
Oncorhynchus	ANCESTRAL SPECIES	46				ENSGT00940000159123.a	ENSGT00390000003289.m.a	ENSGT00940000157341.g	ENSGT00550000074817.v	ENSGT00450000040296	ENSGT00940000159827.e	ENSGT01090000260052.a.b.i	ENSGT01100000263556.a.a.p.a	ENSGT00950000183014.f.b.b.a.b	ENSGT00390000010316 #20	ENSGT00940000156882	ENSGT00390000016988.b	ENSGT00390000015228 #22	ENSGT00390000018786	ENSGT00940000155682.g.b.c	ENSGT00940000162889.e.d	ENSGT00940000154499.hb.d	ENSGT00940000154149.b.a.g.a	ENSGT00390000003574.b	ENSGT00940000159466.f	ENSGT00390000005318.a.a.b	ENSGT00940000156470.u.b.d	ENSGT00940000154587.a.b.v	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000160852
Oncorhynchus_a	ANCESTRAL SPECIES	124					ENSGT00940000159123.a	ENSGT00390000003289.m.a	ENSGT00940000157341.g	ENSGT00550000074817.v	ENSGT00450000040296	ENSGT00940000159827.e	ENSGT01090000260052.a.b.i	ENSGT00950000183014.f.b.b.a.b	ENSGT00390000010316 #20	ENSGT00940000156882	ENSGT00390000016988.b	ENSGT00390000015228 #22	ENSGT00390000018786	ENSGT00940000155682.g.b.c	ENSGT00940000162889.e.d	ENSGT00940000154499.hb.d	ENSGT00940000154149.b.a.g.a	ENSGT00390000003574.b	ENSGT00940000159466.f	ENSGT00390000005318.a.a.b	ENSGT00940000156470.u.b.d	ENSGT00940000154587.a.b.v	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000160852
Coho salmon	MODERN SPECIES	23	ENSOKIG00005033817	ENSOKIG00005033805	ENSOKIG00005033794	rgs20 (ENSOKIG00005033785)	atp6v1h (ENSOKIG00005033648)	oprk1 (ENSOKIG00005033536)	ENSOKIG00005033493	bag1 (ENSOKIG00005033434)	ENSOKIG00005033428	NEUROD6 (ENSOKIG00005033423)	XCR1 (ENSOKIG00005033419)	ENSOKIG00005033361	ndufb3 (ENSOKIG00005033350) #20	pecr (ENSOKIG00005033339)	ENSOKIG00005033276	ENSOKIG00005032991 #22	zgc:162816 (ENSOKIG00005032965)	COL6A2 (ENSOKIG00005032823)	COL6A1 (ENSOKIG00005032756)	rnf2 (ENSOKIG00005032723)	ENSOKIG00005032638	kifap3b (ENSOKIG00005032443)	prrx1a (ENSOKIG00005032405)	mfsd12a (ENSOKIG00005032281)	ENSOKIG00005032008	ENSOKIG00005031961	mknk2a (ENSOKIG00005031885)	ENSOKIG00005031870	yipf1 (ENSOKIG00005031840)	zgc:113691 (ENSOKIG00005031831)	ndc1 (ENSOKIG00005031718)
Rainbow trout	MODERN SPECIES	29	atp6v1h (ENSOMYG00000007811)	oprk1 (ENSOMYG00000007897)	ENSOMYG00000049522	ENSOMYG00000053024	bag1 (ENSOMYG00000016179)	ENSOMYG00000016186	ENSOMYG00000007925	ENSOMYG00000007939	ENSOMYG00000007970	ENSOMYG00000055518 #20	ENSOMYG00000070710	ENSOMYG00000055913	ENSOMYG00000069628	ENSOMYG00000065507	ENSOMYG00000030486	ENSOMYG00000008197 #22	ENSOMYG00000008150	ENSOMYG00000066731	ENSOMYG00000008232	ENSOMYG00000053025	ENSOMYG00000060331	rnf2 (ENSOMYG00000059763)	ENSOMYG00000053433	ENSOMYG00000060736	ENSOMYG00000052984	kifap3b (ENSOMYG00000051848)	ENSOMYG00000074048	ENSOMYG00000040367	ENSOMYG00000070813	ENSOMYG00000068137	ENSOMYG00000009432
Salmo	ANCESTRAL SPECIES	21					ENSGT00390000003289.m.a	ENSGT00940000157341.g	ENSGT00550000074817.v	ENSGT00450000040296.q	ENSGT00940000159827.e	ENSGT01090000260052.a.b.i	ENSGT01100000263556.a.a.p.a	ENSGT00950000183014.f.b.b.a.b	ENSGT00390000010316 #20	ENSGT00940000156882	ENSGT00390000016988.a.a.a.b.c	ENSGT00390000015228 #22	ENSGT00390000018786	ENSGT00940000155682.g.b.c	ENSGT00940000154499.hb.b	ENSGT00940000154149.b.a.g.a	ENSGT00390000003574.b	ENSGT00940000159466.f	ENSGT00390000005318.a.a.b	ENSGT00940000156470.u.b.d	ENSGT00940000154587.a.b.v	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000160852	ENSGT00940000159923
Atlantic salmon	MODERN SPECIES	5	usp33 (ENSSSAG00000101623)	ENSSSAG00000116330	zzz3 (ENSSSAG00000094968)	pigk (ENSSSAG00000115850)	ST6GALNAC5 (ENSSSAG00000093729)	oprk1 (ENSSSAG00000089257)	ENSSSAG00000012543	bag1 (ENSSSAG00000095448)	vath (ENSSSAG00000115585)	ENSSSAG00000102794	ENSSSAG00000121553	ENSSSAG00000006077	ENSSSAG00000006051 #20	pecr (ENSSSAG00000006003)	ENSSSAG00000005944	ENSSSAG00000005923 #22	ENSSSAG00000111495	ENSSSAG00000005914	ENSSSAG00000010340	ENSSSAG00000102193	ENSSSAG00000112044	ENSSSAG00000114011	rnf2 (ENSSSAG00000093859)	ENSSSAG00000047151	kifap3b (ENSSSAG00000110039)	prrx1a (ENSSSAG00000104687)	mfsd12a (ENSSSAG00000120062)	csnk1g2a (ENSSSAG00000040163)	ENSSSAG00000083965	mknk2a (ENSSSAG00000105404)	ENSSSAG00000078182
River trout	MODERN SPECIES	13	clul1 (ENSSTUG00000007676)	colec12 (ENSSTUG00000007660)	rgs20 (ENSSTUG00000007650)	ENSSTUG00000007641	atp6v1h (ENSSTUG00000007406)	oprk1 (ENSSTUG00000007346)	ENSSTUG00000007301	bag1 (ENSSTUG00000007290)	neurod6b (ENSSTUG00000007286)	XCR1 (ENSSTUG00000007283)	ENSSTUG00000007272	ENSSTUG00000007229	ndufb3 (ENSSTUG00000007219) #20	pecr (ENSSTUG00000007212)	ENSSTUG00000007203	ENSSTUG00000007173 #22	zgc:162816 (ENSSTUG00000007152)	COL6A2 (ENSSTUG00000007125)	rnf2 (ENSSTUG00000007110)	ENSSTUG00000007104	ENSSTUG00000007018	kifap3b (ENSSTUG00000006848)	prrx1a (ENSSTUG00000006833)	mfsd12a (ENSSTUG00000006728)	csnk1g2a (ENSSTUG00000006517)	mknk2a (ENSSTUG00000005779)	ENSSTUG00000005743	yipf1 (ENSSTUG00000005728)	zgc:113691 (ENSSTUG00000005725)	ndc1 (ENSSTUG00000004812)	BEST4 (ENSSTUG00000004766)
Northern pike	MODERN SPECIES	2	mknk2a (ENSELUG00000000430)	CSNK1G2 (ENSELUG00000011991)	mfsd12a (ENSELUG00000001637)	prrx1a (ENSELUG00000012056)	kifap3b (ENSELUG00000012102)	ENSELUG00000012243	ENSELUG00000012288	rnf2 (ENSELUG00000012310)	ivns1abpb (ENSELUG00000012365)	mrc1b (ENSELUG00000029154)	ENSELUG00000028016	COL6A1 (ENSELUG00000012467)	ENSELUG00000027054	COL6A2 (ENSELUG00000012520)	zgc:162816 (ENSELUG00000012541)	ENSELUG00000012606 #22	CFAP410 (ENSELUG00000033795)	zgc:171772 (ENSELUG00000000463)	pecr (ENSELUG00000012660)	ndufb3 (ENSELUG00000012669) #20	ugt1b7 (ENSELUG00000012681)	casp20 (ENSELUG00000012710)	ENSELUG00000012775	si:ch73-52e5.2 (ENSELUG00000012838)	LRRC24 (ENSELUG00000012865)	ftr67 (ENSELUG00000012885)	ENSELUG00000033377	eef1da (ENSELUG00000012922)	ENSELUG00000012931	adcyap1r1a (ENSELUG00000008793)	FYCO1 (ENSELUG00000000335)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00390000015228 #22
Asian bonytongue	MODERN SPECIES	3	LRRC3 (ENSSFOG00015027599)	ENSSFOG00015014686	ENSSFOG00015014657	tfpia (ENSSFOG00015014641)	GULP1 (ENSSFOG00015014580)	COL5A2 (ENSSFOG00015014497)	PJVK (ENSSFOG00015014463)	fkbp7 (ENSSFOG00015027461)	plekha3 (ENSSFOG00015014427)	ENSSFOG00015014419	ENSSFOG00015014123	ENSSFOG00015032538	ENSSFOG00015027832	ENSSFOG00015013909	prmt2 (ENSSFOG00015013865)	ENSSFOG00015013824 #22	PFKL (ENSSFOG00015013773)	ENSSFOG00015013761	xrcc5 (ENSSFOG00015013724)	zgc:162816 (ENSSFOG00015013697)	COL6A2 (ENSSFOG00015013569)	COL6A1 (ENSSFOG00015013459)	SMARCAL1 (ENSSFOG00015013429)	nme9 (ENSSFOG00015013368)	vps8 (ENSSFOG00015013264)	ehhadh (ENSSFOG00015013128)	tmem41ab (ENSSFOG00015032627)	TRA2B (ENSSFOG00015013018)	ENSSFOG00015012752	ENSSFOG00015012581	ENSSFOG00015029987
P. kingsleyae	MODERN SPECIES	889																ORC2 (ENSPKIG00000003680) #22
Spotted gar	MODERN SPECIES	650	fn1a (ENSLOCG00000010020)	atic (ENSLOCG00000010002)	ENSLOCG00000017839	ENSLOCG00000009965	glsa (ENSLOCG00000009954)	nab1a (ENSLOCG00000009947)	nemp2 (ENSLOCG00000009929)	ENSLOCG00000009922	mfsd6a (ENSLOCG00000009915)	ENSLOCG00000017838	ENSLOCG00000009909	ENSLOCG00000009880	cflara (ENSLOCG00000009863) #19	ndufb3 (ENSLOCG00000009855) #20	HYCC2 (ENSLOCG00000009846) #21	ORC2 (ENSLOCG00000009832) #22	CFAP410 (ENSLOCG00000009819)	trpm2 (ENSLOCG00000009806)	MAP3K13 (ENSLOCG00000009793)	pfklb (ENSLOCG00000009776)	ENSLOCG00000009771	ENSLOCG00000009762	pecr (ENSLOCG00000009750)	tmem169a (ENSLOCG00000009744)	xrcc5 (ENSLOCG00000009725)	zgc:162816 (ENSLOCG00000009716)	COL6A2 (ENSLOCG00000009684)	COL6A1 (ENSLOCG00000009665)	marchf4l (ENSLOCG00000009654)	SMARCAL1 (ENSLOCG00000009637)	nme9 (ENSLOCG00000009626)
Reedfish	MODERN SPECIES	16	ical1 (ENSECRG00000006974)	ENSECRG00000006985	FAM117B (ENSECRG00000007001)	bmpr2a (ENSECRG00000007028)	NBEAL1 (ENSECRG00000007092)	si:dkey-69o16.5 (ENSECRG00000007152)	STRADB (ENSECRG00000007160) #13	TRAK2 (ENSECRG00000007185) #15	ENSECRG00000007218 #17	CASP10 (ENSECRG00000007236) #18	ENSECRG00000007259	CFLAR (ENSECRG00000007275) #19	ndufb3 (ENSECRG00000007295) #20	hycc2 (ENSECRG00000007306) #21	trpm2 (ENSECRG00000007329)	ENSECRG00000007353 #22	CFAP410 (ENSECRG00000007370)	trpm2 (ENSECRG00000007386)	COL5A2 (ENSECRG00000007424)	ENSECRG00000007458	fkbp7 (ENSECRG00000007471)	plekha3 (ENSECRG00000007485)	ENSECRG00000007500	ENSECRG00000007510	ENSECRG00000007538	ENSECRG00000007620	ENSECRG00000007652	ENSECRG00000007738	ENSECRG00000007825	ENSECRG00000007905	ENSECRG00000007991