Rodentia	ANCESTRAL SPECIES	22	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Rodentia_B	ANCESTRAL SPECIES	48	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Muroidea	ANCESTRAL SPECIES	25	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00840000130852 #13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT01050000247125 #15	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a.e ##8	ENSGT00950000182865.b.a.b.b.b.a.f #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT01050000247125 #15	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Rat	MODERN SPECIES	6	Setdb2 (ENSRNOG00000021680) #7	ENSRNOG00000065100 #8	Phf11 (ENSRNOG00000053891) #9	Phf11b (ENSRNOG00000064184) #10	ENSRNOG00000067681 #11	Rcbtb1 (ENSRNOG00000021712) #12	RGD1563302 (ENSRNOG00000038917) #13	ENSRNOG00000064315 #14	LOC691850 (ENSRNOG00000053522) #15	Fgf9 (ENSRNOG00000011471) #16	Micu2 (ENSRNOG00000011168) #17	Zdhhc20 (ENSRNOG00000011024) #18	Mrpl57 (ENSRNOG00000062588) #19	Ska3 (ENSRNOG00000021847) #20	Sap18-ps1 (ENSRNOG00000064694) #21	Lats2 (ENSRNOG00000056343) #22	Xpo4 (ENSRNOG00000010137) #23	Eef1akmt1 (ENSRNOG00000009849) #24	AABR07018058.1 (ENSRNOG00000057750) #25	Ift88 (ENSRNOG00000009278) #26	Cryl1 (ENSRNOG00000008989) #27	RGD1565170 (ENSRNOG00000032148) #28	ENSRNOG00000068095 #29	Gjb6 (ENSRNOG00000022116) #30	Gjb2 (ENSRNOG00000008855) #31	ENSRNOG00000065600 #32	Gja3 (ENSRNOG00000008847) #33	AABR07018048.2 (ENSRNOG00000059279) #34	ENSRNOG00000064786 #35	Zmym2 (ENSRNOG00000008734) #36	ENSRNOG00000066806 #37
Mus	ANCESTRAL SPECIES	8	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a.e.a ##8	ENSGT00950000182865.b.a.b.b.b.a.f #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a.e.a ##8	ENSGT00950000182865.b.a.b.b.b.a.f.b #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b.c #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a.e.a ##8	ENSGT00950000182865.b.a.b.b.b.a.f.b #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b.c #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a.e.a ##8	ENSGT00950000182865.b.a.b.b.b.a.f.b #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000235001 #32	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b.c #33	ENSGT01050000244864.B.b.d #33	ENSGT00840000130327.b.d #34	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087
spretus	MODERN SPECIES	5	Shisa2 (MGP_SPRETEiJ_G0020262)	Cdadc1 (MGP_SPRETEiJ_G0020261)	Cab39l (MGP_SPRETEiJ_G0020260)	Setdb2 (MGP_SPRETEiJ_G0020259) #7	MGP_SPRETEiJ_G0020258 ##8	MGP_SPRETEiJ_G0020257 #8	MGP_SPRETEiJ_G0020256 #12	MGP_SPRETEiJ_G0020255 #13	1700129C05Rik (MGP_SPRETEiJ_G0020254) ##13	Fgf9 (MGP_SPRETEiJ_G0020253) #16	Micu2 (MGP_SPRETEiJ_G0020252) #17	Zdhhc20 (MGP_SPRETEiJ_G0020251) #18	Mrpl57 (MGP_SPRETEiJ_G0020250) #19	Ska3 (MGP_SPRETEiJ_G0020249) #20	MGP_SPRETEiJ_G0020248 #21	Lats2 (MGP_SPRETEiJ_G0020247) #22	Xpo4 (MGP_SPRETEiJ_G0020246) #23	Eef1akmt1 (MGP_SPRETEiJ_G0020245) #24	Il17d (MGP_SPRETEiJ_G0020244)	MGP_SPRETEiJ_G0020243 #26	Cryl1 (MGP_SPRETEiJ_G0020242) #27	Gjb6 (MGP_SPRETEiJ_G0020241) #30	MGP_SPRETEiJ_G0020240	Gjb2 (MGP_SPRETEiJ_G0020239) #31	Gja3 (MGP_SPRETEiJ_G0020238) #33	MGP_SPRETEiJ_G0020237 #33	MGP_SPRETEiJ_G0020236 #34	MGP_SPRETEiJ_G0020235 #34	Zmym2 (MGP_SPRETEiJ_G0020234) #36	Zmym5 (MGP_SPRETEiJ_G0020233)	Pspc1 (MGP_SPRETEiJ_G0020232)
Steppe mouse	MODERN SPECIES	2645																Lats2 (ENSMSIG00000013607) #22	Xpo4 (ENSMSIG00000013472) #23	Eef1akmt1 (ENSMSIG00000013439) #24	ENSMSIG00000013430	ENSMSIG00000012986 #26	ENSMSIG00000012977	Cryl1 (ENSMSIG00000012944) #27	Gjb6 (ENSMSIG00000012936) #30	ENSMSIG00000012911 #32	Gjb2 (ENSMSIG00000012908) #31	Gja3 (ENSMSIG00000012901) #33
Mouse	MODERN SPECIES	5	Cdadc1 (ENSMUSG00000021982)	Cab39l (ENSMUSG00000021981)	Setdb2 (ENSMUSG00000071350) #7	Phf11c (ENSMUSG00000091144) ##8	Phf11d (ENSMUSG00000068245) #8	Phf11b (ENSMUSG00000091649) #8	Phf11a (ENSMUSG00000044703) #8	Rcbtb1 (ENSMUSG00000035469) #12	1700129C05Rik (ENSMUSG00000021977) ##13	Fgf9 (ENSMUSG00000021974) #16	Micu2 (ENSMUSG00000021973) #17	Zdhhc20 (ENSMUSG00000021969) #18	Mrpl57 (ENSMUSG00000021967) #19	Ska3 (ENSMUSG00000021965) #20	Sap18 (ENSMUSG00000021963) #21	Lats2 (ENSMUSG00000021959) #22	Xpo4 (ENSMUSG00000021952) #23	Eef1akmt1 (ENSMUSG00000021951) #24	Il17d (ENSMUSG00000050222)	Ift88 (ENSMUSG00000040040) #26	Cryl1 (ENSMUSG00000021947) #27	Gjb6 (ENSMUSG00000040055) #30	Gjb2 (ENSMUSG00000046352) #31	Gja3 (ENSMUSG00000048582) #33	Zmym2 (ENSMUSG00000021945) #36	Zmym5 (ENSMUSG00000040123)	Pspc1 (ENSMUSG00000021938)	Mphosph8 (ENSMUSG00000079184)	Parp4 (ENSMUSG00000054509)	Cenpj (ENSMUSG00000064128)	Rnf17 (ENSMUSG00000000365)
Ryukyu mouse	MODERN SPECIES	5	Cab39l (MGP_CAROLIEiJ_G0019368)	Setdb2 (MGP_CAROLIEiJ_G0019367) #7	MGP_CAROLIEiJ_G0019366 #8	MGP_CAROLIEiJ_G0019362 ##8	MGP_CAROLIEiJ_G0019365 ##8	MGP_CAROLIEiJ_G0019363 ##8	MGP_CAROLIEiJ_G0019364 ##8	MGP_CAROLIEiJ_G0019361 #12	MGP_CAROLIEiJ_G0019360 #13	1700129C05Rik (MGP_CAROLIEiJ_G0019359) ##13	Fgf9 (MGP_CAROLIEiJ_G0019358) #16	Micu2 (MGP_CAROLIEiJ_G0019357) #17	Zdhhc20 (MGP_CAROLIEiJ_G0019356) #18	Ska3 (MGP_CAROLIEiJ_G0019355) #20	MGP_CAROLIEiJ_G0019354 #21	Lats2 (MGP_CAROLIEiJ_G0019353) #22	Xpo4 (MGP_CAROLIEiJ_G0019352) #23	Eef1akmt1 (MGP_CAROLIEiJ_G0019351) #24	Il17d (MGP_CAROLIEiJ_G0019350)	Ift88 (MGP_CAROLIEiJ_G0019349) #26	Cryl1 (MGP_CAROLIEiJ_G0019348) #27	Gjb6 (MGP_CAROLIEiJ_G0019347) #30	MGP_CAROLIEiJ_G0019346	Gjb2 (MGP_CAROLIEiJ_G0019345) #31	Gja3 (MGP_CAROLIEiJ_G0019344) #33	Zmym2 (MGP_CAROLIEiJ_G0019343) #36	MGP_CAROLIEiJ_G0019342	Pspc1 (MGP_CAROLIEiJ_G0019341)	Mphosph8 (MGP_CAROLIEiJ_G0019340)	Parp4 (MGP_CAROLIEiJ_G0019339)	Cenpj (MGP_CAROLIEiJ_G0019338)
Shrew mouse	MODERN SPECIES	21	Cab39l (MGP_PahariEiJ_G0030386)	Setdb2 (MGP_PahariEiJ_G0030385) #7	MGP_PahariEiJ_G0030384 ##8	MGP_PahariEiJ_G0030383 ##8	MGP_PahariEiJ_G0030382 #8	MGP_PahariEiJ_G0030381 #8	Rcbtb1 (MGP_PahariEiJ_G0030380) #12	MGP_PahariEiJ_G0030379 #13	1700129C05Rik (MGP_PahariEiJ_G0030378) ##13	Fgf9 (MGP_PahariEiJ_G0030377) #16	Micu2 (MGP_PahariEiJ_G0030376) #17	Zdhhc20 (MGP_PahariEiJ_G0030375) #18	Mrpl57 (MGP_PahariEiJ_G0030374) #19	Ska3 (MGP_PahariEiJ_G0030373) #20	MGP_PahariEiJ_G0030372 #21	Lats2 (MGP_PahariEiJ_G0030371) #22	Xpo4 (MGP_PahariEiJ_G0030370) #23	Eef1akmt1 (MGP_PahariEiJ_G0030369) #24	Il17d (MGP_PahariEiJ_G0030368)	Ift88 (MGP_PahariEiJ_G0030367) #26	Cryl1 (MGP_PahariEiJ_G0030366) #27	Gjb6 (MGP_PahariEiJ_G0030365) #30	MGP_PahariEiJ_G0030364	Gjb2 (MGP_PahariEiJ_G0030363) #31	Gja3 (MGP_PahariEiJ_G0030362) #33	Zmym2 (MGP_PahariEiJ_G0030361) #36	Zmym5 (MGP_PahariEiJ_G0030360)	Pspc1 (MGP_PahariEiJ_G0030359)	Mphosph8 (MGP_PahariEiJ_G0030358)	Parp4 (MGP_PahariEiJ_G0030357)	Cenpj (MGP_PahariEiJ_G0030356)
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT01050000247125 #15	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00940000157332	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT01050000247125 #15	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b	ENSGT00940000157559
Chinese hamster chok1gshd	MODERN SPECIES	3	Atp8a2 (ENSCGRG00001009592)	Shisa2 (ENSCGRG00001022075)	Cdadc1 (ENSCGRG00001023418)	Cab39l (ENSCGRG00001018025)	Setdb2 (ENSCGRG00001011194) #7	ENSCGRG00001017420 #8	ENSCGRG00001017298 #12	ENSCGRG00001016056 #13	ENSCGRG00001000235 #15	Fgf9 (ENSCGRG00001000618) #16	Micu2 (ENSCGRG00001019591) #17	Zdhhc20 (ENSCGRG00001016155) #18	Mrpl57 (ENSCGRG00001003685) #19	Ska3 (ENSCGRG00001020376) #20	ENSCGRG00001017316 #21	Lats2 (ENSCGRG00001020388) #22	Xpo4 (ENSCGRG00001004627) #23	Eef1akmt1 (ENSCGRG00001016674) #24	Il17d (ENSCGRG00001015993)	Ift88 (ENSCGRG00001014835) #26	Cryl1 (ENSCGRG00001017496) #27	Gjb6 (ENSCGRG00001005145) #30	Gjb2 (ENSCGRG00001005883) #31	Gja3 (ENSCGRG00001004707) #33	Zmym2 (ENSCGRG00001018436) #36	Zmym5 (ENSCGRG00001006520)	Pspc1 (ENSCGRG00001018368)	Mphosph8 (ENSCGRG00001000268)	Parp4 (ENSCGRG00001021886)	ENSCGRG00001009217	Cenpj (ENSCGRG00001011647)
Golden Hamster	MODERN SPECIES	670	C1qtnf9 (ENSMAUG00000006985)	Amer2 (ENSMAUG00000007607)	Mtmr6 (ENSMAUG00000015618)	ENSMAUG00000010191	ENSMAUG00000016296	Shisa2 (ENSMAUG00000018919)	Cdadc1 (ENSMAUG00000016628)	Cab39l (ENSMAUG00000021570)	Setdb2 (ENSMAUG00000012871) #7	ENSMAUG00000010572 #8	Rcbtb1 (ENSMAUG00000019433) #12	Fgf9 (ENSMAUG00000019224) #16	Micu2 (ENSMAUG00000012604) #17	Zdhhc20 (ENSMAUG00000001184) #18	Mrpl57 (ENSMAUG00000012206) #19	Lats2 (ENSMAUG00000020573) #22	ENSMAUG00000004111 #23	Eef1akmt1 (ENSMAUG00000000714) #24	Ift88 (ENSMAUG00000013897) #26	Cryl1 (ENSMAUG00000008825) #27	Gjb6 (ENSMAUG00000010441) #30	Gjb2 (ENSMAUG00000021056) #31	Gja3 (ENSMAUG00000007642) #33	Zmym2 (ENSMAUG00000021891) #36	ENSMAUG00000019317	Pspc1 (ENSMAUG00000021067)	Mphosph8 (ENSMAUG00000016609)	Cenpj (ENSMAUG00000020408)	Rnf17 (ENSMAUG00000004788)	Atp12a (ENSMAUG00000020518)	Gzmb (ENSMAUG00000004999)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000157332	ENSGT00940000157443	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b	ENSGT00940000158209 #7	ENSGT00950000182865.b.a.b.b.b.a #8	ENSGT00940000155814 #12	ENSGT00840000130852.b #13	ENSGT00840000130852.a.a ##13	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Northern American deer mouse	MODERN SPECIES	22	ENSPEMG00000025963	Atp8a2 (ENSPEMG00000019433)	Shisa2 (ENSPEMG00000030541)	Cdadc1 (ENSPEMG00000020295)	Cab39l (ENSPEMG00000012244)	Setdb2 (ENSPEMG00000020697) #7	ENSPEMG00000020517 #8	Rcbtb1 (ENSPEMG00000012943) #12	ENSPEMG00000015984 ##13	Fgf9 (ENSPEMG00000028908) #16	Micu2 (ENSPEMG00000013668) #17	Zdhhc20 (ENSPEMG00000020348) #18	Mrpl57 (ENSPEMG00000003727) #19	Ska3 (ENSPEMG00000020939) #20	ENSPEMG00000030110 #21	Lats2 (ENSPEMG00000000178) #22	Xpo4 (ENSPEMG00000017255) #23	Eef1akmt1 (ENSPEMG00000031126) #24	Il17d (ENSPEMG00000022121)	Ift88 (ENSPEMG00000020287) #26	Cryl1 (ENSPEMG00000020441) #27	ENSPEMG00000027758 #29	Gjb6 (ENSPEMG00000026881) #30	Gjb2 (ENSPEMG00000029001) #31	Gja3 (ENSPEMG00000025078) #33	Zmym2 (ENSPEMG00000011174) #36	ENSPEMG00000028639	Zmym5 (ENSPEMG00000016467)	Pspc1 (ENSPEMG00000015214)	Mphosph8 (ENSPEMG00000015110)	Parp4 (ENSPEMG00000012639)
Prairie vole	MODERN SPECIES	4	Cab39l (ENSMOCG00000016772)	Setdb2 (ENSMOCG00000021987) #7	ENSMOCG00000008534 #8	ENSMOCG00000006162	Rcbtb1 (ENSMOCG00000015644) #12	ENSMOCG00000021827 #13	ENSMOCG00000022640	Fgf9 (ENSMOCG00000023005) #16	Micu2 (ENSMOCG00000007162) #17	ENSMOCG00000016347	Zdhhc20 (ENSMOCG00000020906) #18	Mrpl57 (ENSMOCG00000014838) #19	Ska3 (ENSMOCG00000017435) #20	ENSMOCG00000018977 #21	ENSMOCG00000019590	ENSMOCG00000001002 #22	Xpo4 (ENSMOCG00000006678) #23	Eef1akmt1 (ENSMOCG00000008268) #24	Il17d (ENSMOCG00000009965)	Ift88 (ENSMOCG00000012844) #26	Cryl1 (ENSMOCG00000012653) #27	Gjb6 (ENSMOCG00000013000) #30	Gjb2 (ENSMOCG00000016041) #31	Gja3 (ENSMOCG00000016618) #33	Zmym2 (ENSMOCG00000019626) #36	Zmym5 (ENSMOCG00000001655)	Pspc1 (ENSMOCG00000006060)	ENSMOCG00000009441	Parp4 (ENSMOCG00000016582)	Cenpj (ENSMOCG00000006479)	ENSMOCG00000011818
Upper Galilee mountains blind mole rat	MODERN SPECIES	1865												Zdhhc20 (ENSNGAG00000011001) #18	Mrpl57 (ENSNGAG00000016942) #19	Ska3 (ENSNGAG00000000176) #20	ENSNGAG00000015061 #21	Lats2 (ENSNGAG00000016051) #22	Xpo4 (ENSNGAG00000014823) #23	ENSNGAG00000016446	Eef1akmt1 (ENSNGAG00000018029) #24	Il17d (ENSNGAG00000015710)	Ift88 (ENSNGAG00000018550) #26	ENSNGAG00000012819	Cryl1 (ENSNGAG00000014751) #27	Gjb6 (ENSNGAG00000000185) #30	Gjb2 (ENSNGAG00000001303) #31	Gja3 (ENSNGAG00000007139) #33	Zmym2 (ENSNGAG00000015366) #36	Zmym5 (ENSNGAG00000013371)	Pspc1 (ENSNGAG00000011271)	ENSNGAG00000012934	Parp4 (ENSNGAG00000018396)
Lesser Egyptian jerboa	MODERN SPECIES	189	Amer2 (ENSJJAG00000012723)	Spata13 (ENSJJAG00000013440)	ENSJJAG00000014200	C1qtnf9 (ENSJJAG00000014443)	ENSJJAG00000012136	Mipep (ENSJJAG00000014901)	Tnfrsf19 (ENSJJAG00000015658)	Sacs (ENSJJAG00000016773)	Sgcg (ENSJJAG00000010460)	Fgf9 (ENSJJAG00000011529) #16	Micu2 (ENSJJAG00000012402) #17	Zdhhc20 (ENSJJAG00000013434) #18	Ska3 (ENSJJAG00000014820) #20	ENSJJAG00000014878 #21	ENSJJAG00000014928	Lats2 (ENSJJAG00000015372) #22	Xpo4 (ENSJJAG00000019782) #23	Eef1akmt1 (ENSJJAG00000004978) #24	Ift88 (ENSJJAG00000009240) #26	Cryl1 (ENSJJAG00000013333) #27	ENSJJAG00000014271	ENSJJAG00000014461	Gjb6 (ENSJJAG00000012124) #30	Gjb2 (ENSJJAG00000012118) #31
Kangaroo rat	MODERN SPECIES	320	ENSDORG00000013283	ENSDORG00000029901	ENSDORG00000027809	C1qtnf9 (ENSDORG00000027816)	Mipep (ENSDORG00000009787)	Tnfrsf19 (ENSDORG00000015611)	Sacs (ENSDORG00000027871)	Sgcg (ENSDORG00000005659)	ENSDORG00000024214	Fgf9 (ENSDORG00000027347) #16	Micu2 (ENSDORG00000002228) #17	Zdhhc20 (ENSDORG00000003892) #18	Mrpl57 (ENSDORG00000028118) #19	Ska3 (ENSDORG00000005433) #20	ENSDORG00000029994 #21	Lats2 (ENSDORG00000011231) #22	Xpo4 (ENSDORG00000012712) #23	ENSDORG00000023193 #24	ENSDORG00000008228	ENSDORG00000027898	Atp12a (ENSDORG00000001519)	Cenpj (ENSDORG00000016674)	ENSDORG00000025901	Parp4 (ENSDORG00000029090)	ENSDORG00000023318	Pspc1 (ENSDORG00000016050)	ENSDORG00000024933	Zmym2 (ENSDORG00000014720) #36	Gja3 (ENSDORG00000012415) #33	Gjb2 (ENSDORG00000023482) #31	Gjb6 (ENSDORG00000015151) #30
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00730000111659	ENSGT00940000154936.qb	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Sciuridae	ANCESTRAL SPECIES	52	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000154103.a	ENSGT00730000111659	ENSGT00940000154936.qb	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Eurasian red squirrel	MODERN SPECIES	13	SPATA13 (ENSSVLG00005017162)	ENSSVLG00005017078	ENSSVLG00005016967	ENSSVLG00005016939	MIPEP (ENSSVLG00005016891)	TNFRSF19 (ENSSVLG00005016700)	ENSSVLG00005016637	SACS (ENSSVLG00005016468)	SGCG (ENSSVLG00005016439)	FGF9 (ENSSVLG00005016397) #16	MICU2 (ENSSVLG00005016369) #17	ZDHHC20 (ENSSVLG00005016291) #18	ENSSVLG00005016263 #19	SKA3 (ENSSVLG00005016177) #20	SAP18 (ENSSVLG00005016126) #21	LATS2 (ENSSVLG00005016105) #22	ENSSVLG00005016090	XPO4 (ENSSVLG00005015958) #23	EEF1AKMT1 (ENSSVLG00005015915) #24	IL17D (ENSSVLG00005015879)	ENSSVLG00005015855	IFT88 (ENSSVLG00005015641) #26	CRYL1 (ENSSVLG00005015539) #27	ENSSVLG00005015520 #29	GJB6 (ENSSVLG00005015504) #30	GJB2 (ENSSVLG00005015488) #31	ZMYM2 (ENSSVLG00005015358) #36	ENSSVLG00005015259	ENSSVLG00005015231	PSPC1 (ENSSVLG00005015195)	MPHOSPH8 (ENSSVLG00005015164)
Marmotini	ANCESTRAL SPECIES	55	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Alpin marmot	MODERN SPECIES	60	ENSMMMG00000008249	NDFIP2 (ENSMMMG00000008254)	RBM26 (ENSMMMG00000008268)	OBI1 (ENSMMMG00000008378)	EDNRB (ENSMMMG00000008410)	SLAIN1 (ENSMMMG00000008454)	SCEL (ENSMMMG00000008478)	ENSMMMG00000008553	ENSMMMG00000008560 #16	MICU2 (ENSMMMG00000008572) #17	ZDHHC20 (ENSMMMG00000008578) #18	MRPL57 (ENSMMMG00000008627) #19	SKA3 (ENSMMMG00000008632) #20	SAP18 (ENSMMMG00000008645) #21	ENSMMMG00000008664	LATS2 (ENSMMMG00000008675) #22	ENSMMMG00000008684 #23	EEF1AKMT1 (ENSMMMG00000008721) #24	IFT88 (ENSMMMG00000008732) #26	CRYL1 (ENSMMMG00000008777) #27	ENSMMMG00000008789	ENSMMMG00000008803 #29	GJB6 (ENSMMMG00000008806) #30	GJB2 (ENSMMMG00000008811) #31	ENSMMMG00000008819	ZMYM2 (ENSMMMG00000008821) #36	PSPC1 (ENSMMMG00000008864)	MPHOSPH8 (ENSMMMG00000008877)	ENSMMMG00000008887	PARP4 (ENSMMMG00000008914)	ENSMMMG00000012048
Marmotini_b	ANCESTRAL SPECIES	126	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000154103.a	ENSGT00940000154936.qb	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b
Squirrel	MODERN SPECIES	320									FGF9 (ENSSTOG00000027795) #16	MICU2 (ENSSTOG00000014159) #17	ZDHHC20 (ENSSTOG00000005778) #18	ENSSTOG00000031266	MRPL57 (ENSSTOG00000005771) #19	SKA3 (ENSSTOG00000023482) #20	SAP18 (ENSSTOG00000005735) #21	LATS2 (ENSSTOG00000026606) #22	XPO4 (ENSSTOG00000010695) #23	EEF1AKMT1 (ENSSTOG00000010687) #24	IL17D (ENSSTOG00000010686)	IFT88 (ENSSTOG00000015529) #26	CRYL1 (ENSSTOG00000004469) #27	GJB6 (ENSSTOG00000005839) #30	GJB2 (ENSSTOG00000025860) #31	GJA3 (ENSSTOG00000023835) #33	ZMYM2 (ENSSTOG00000021771) #36	ZMYM5 (ENSSTOG00000026074)	PSPC1 (ENSSTOG00000026833)	MPHOSPH8 (ENSSTOG00000028371)	PARP4 (ENSSTOG00000027869)	CENPJ (ENSSTOG00000011291)	ENSSTOG00000011255
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	41														HCN1 (ENSUPAG00010005339)	EMB (ENSUPAG00010005328)	ENSUPAG00010005320 #22	PARP8 (ENSUPAG00010005280)	ENSUPAG00010005266	ISL1 (ENSUPAG00010005249)	PELO (ENSUPAG00010005244)	ITGA1 (ENSUPAG00010005218)	ITGA2 (ENSUPAG00010005187)	MOCS2 (ENSUPAG00010005171)	FST (ENSUPAG00010005146)	NDUFS4 (ENSUPAG00010005134)	ARL15 (ENSUPAG00010005094)	HSPB3 (ENSUPAG00010005091)	SNX18 (ENSUPAG00010005081)	ENSUPAG00010005077	ENSUPAG00010005064	ESM1 (ENSUPAG00010005059)
Arctic ground squirrel	MODERN SPECIES	146		SPATA13 (ENSUPAG00010019283)	ENSUPAG00010019277	ENSUPAG00010019273	MIPEP (ENSUPAG00010019262)	TNFRSF19 (ENSUPAG00010019211)	SACS (ENSUPAG00010019206)	SGCG (ENSUPAG00010019187)	FGF9 (ENSUPAG00010019175) #16	MICU2 (ENSUPAG00010019160) #17	ZDHHC20 (ENSUPAG00010019108) #18	MRPL57 (ENSUPAG00010019104) #19	SKA3 (ENSUPAG00010019091) #20	ENSUPAG00010019075 #21	ENSUPAG00010019074	LATS2 (ENSUPAG00010019063) #22	XPO4 (ENSUPAG00010019008) #23	EEF1AKMT1 (ENSUPAG00010018994) #24	IL17D (ENSUPAG00010018984)	IFT88 (ENSUPAG00010018942) #26	CRYL1 (ENSUPAG00010018935) #27	ENSUPAG00010018929 #29	GJB6 (ENSUPAG00010018922) #30	GJB2 (ENSUPAG00010018893) #31	ZMYM2 (ENSUPAG00010018828) #36	ENSUPAG00010018823	ZMYM5 (ENSUPAG00010018804)	PSPC1 (ENSUPAG00010018787)	MPHOSPH8 (ENSUPAG00010018779)	PARP4 (ENSUPAG00010018755)	CENPJ (ENSUPAG00010018663)
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00730000111659	ENSGT00940000154936.qb	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01100000263886 #29	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT01030000235001 #32	ENSGT01050000244864.B.b #33	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000021069	ENSHGLG00000014175	MIPEP (ENSHGLG00000007271)	TNFRSF19 (ENSHGLG00000014259)	SACS (ENSHGLG00000014610)	SGCG (ENSHGLG00000015643)	FGF9 (ENSHGLG00000031951) #16	MICU2 (ENSHGLG00000008372) #17	ZDHHC20 (ENSHGLG00000010251) #18	MRP63 (ENSHGLG00000045497) #19	ENSHGLG00000006835 #20	SAP18 (ENSHGLG00000047873) ##21	ENSHGLG00000036935	ENSHGLG00000050381	ENSHGLG00000032844	ENSHGLG00000011142 #22	XPO4 (ENSHGLG00000018113) #23	ENSHGLG00000021027	ENSHGLG00000020716	ENSHGLG00000048144 #24	IL17D (ENSHGLG00000009735)	IFT88 (ENSHGLG00000010561) #26	CRYL1 (ENSHGLG00000013543) #27	ENSHGLG00000032773 #29	GJB6 (ENSHGLG00000014019) #30	GJB2 (ENSHGLG00000017361) #31	ENSHGLG00000017378	ENSHGLG00000044516 #32	GJA3 (ENSHGLG00000038335) #33	ZMYM2 (ENSHGLG00000014453) #36	ZMYM5 (ENSHGLG00000017994)
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00730000111659	ENSGT00940000154936.qb	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00940000161739	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000159259.b	ENSGT00740000115687
Guinea pig	MODERN SPECIES	6	AMER2 (ENSCPOG00000014858)	ENSCPOG00000031549	ENSCPOG00000014970	ENSCPOG00000038067	ENSCPOG00000004523	MIPEP (ENSCPOG00000004508)	TNFRSF19 (ENSCPOG00000012054)	SACS (ENSCPOG00000038995)	SGCG (ENSCPOG00000012598)	ENSCPOG00000036289 #16	MICU2 (ENSCPOG00000005345) #17	ZDHHC20 (ENSCPOG00000011489) #18	MRPL57 (ENSCPOG00000035269) #19	SKA3 (ENSCPOG00000020594) #20	SAP18 (ENSCPOG00000030190) #21	LATS2 (ENSCPOG00000024403) #22	ENSCPOG00000019890	XPO4 (ENSCPOG00000001466) #23	EEF1AKMT1 (ENSCPOG00000011464) #24	IL17D (ENSCPOG00000011462)	ENSCPOG00000002962	IFT88 (ENSCPOG00000009162) #26	CRYL1 (ENSCPOG00000003273) #27	GJB6 (ENSCPOG00000040796) #30	GJB2 (ENSCPOG00000034192) #31	ZMYM2 (ENSCPOG00000012762) #36	ENSCPOG00000002138	PSPC1 (ENSCPOG00000000395)	MPHOSPH8 (ENSCPOG00000002864)	CENPJ (ENSCPOG00000012145)	ATP12A (ENSCPOG00000003407)
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00530000063529.A	ENSGT00940000166713	ENSGT00940000154103.a	ENSGT00730000111659	ENSGT00940000154936.qb	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000160956 #16	ENSGT00950000183079.A.b.c.b #17	ENSGT00940000153716.A #18	ENSGT00390000008171 #19	ENSGT00500000045005 #20	ENSGT00390000003152.j #21	ENSGT00940000159161 #22	ENSGT00940000153139.A #23	ENSGT00390000016366 #24	ENSGT00390000015473 #26	ENSGT00390000007182 #27	ENSGT01030000234513.B.b.j #30	ENSGT01030000234513.B.b.i #31	ENSGT00940000157028 #36	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000159259.b	ENSGT00740000115687
Long-tailed chinchilla	MODERN SPECIES	204	NUP58 (ENSCLAG00000007593)	MTMR6 (ENSCLAG00000007452)	ENSCLAG00000007038	ENSCLAG00000006203	ENSCLAG00000006127	MIPEP (ENSCLAG00000005794)	TNFRSF19 (ENSCLAG00000005613)	SACS (ENSCLAG00000005183)	SGCG (ENSCLAG00000004918)	FGF9 (ENSCLAG00000004805) #16	MICU2 (ENSCLAG00000004724) #17	ZDHHC20 (ENSCLAG00000004600) #18	SKA3 (ENSCLAG00000004485) #20	SAP18 (ENSCLAG00000004457) #21	ENSCLAG00000004408	LATS2 (ENSCLAG00000004285) #22	XPO4 (ENSCLAG00000004079) #23	EEF1AKMT1 (ENSCLAG00000003951) #24	IFT88 (ENSCLAG00000003866) #26	CRYL1 (ENSCLAG00000003785) #27	GJB6 (ENSCLAG00000003742) #30	GJB2 (ENSCLAG00000017596) #31	ZMYM2 (ENSCLAG00000005436) #36	ENSCLAG00000005323	PSPC1 (ENSCLAG00000005241)	ENSCLAG00000005140	CENPJ (ENSCLAG00000004948)	RNF17 (ENSCLAG00000004127)	ATP12A (ENSCLAG00000003976)	ENSCLAG00000003878
Degu	MODERN SPECIES	152							ENSODEG00000004468	FGF9 (ENSODEG00000004539) #16	MICU2 (ENSODEG00000004604) #17	ENSODEG00000019079	ZDHHC20 (ENSODEG00000005001) #18	ENSODEG00000004240	ENSODEG00000019044 #19	SKA3 (ENSODEG00000004706) #20	ENSODEG00000004190 #21	LATS2 (ENSODEG00000004589) #22	XPO4 (ENSODEG00000005747) #23	ENSODEG00000005892	ENSODEG00000005066	EEF1AKMT1 (ENSODEG00000005282) #24	IFT88 (ENSODEG00000006548) #26	CRYL1 (ENSODEG00000005341) #27	ENSODEG00000005772	GJB6 (ENSODEG00000019244) #30	GJB2 (ENSODEG00000019286) #31	ZMYM2 (ENSODEG00000004718) #36	ENSODEG00000019072	ENSODEG00000007331	ENSODEG00000007655	ENSODEG00000007817	ENSODEG00000005412