Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Glires	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641.b #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641.b #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Northern American deer mouse	MODERN SPECIES		Ndufs8 (ENSPEMG00000014723) #7	Aldh3b1 (ENSPEMG00000026438) #8	Unc93b1 (ENSPEMG00000015773) #9	Aldh3b3 (ENSPEMG00000024395) #10	Aldh3b2 (ENSPEMG00000026919) #11	ENSPEMG00000014977 #12	Tbx10 (ENSPEMG00000017754) #13	Nudt8 (ENSPEMG00000018440) #14	Doc2g (ENSPEMG00000005234) #15	Ndufv1 (ENSPEMG00000011587) #16	ENSPEMG00000005365 #17	ENSPEMG00000029247 #18	ENSPEMG00000016907 #19	Gstp3 (ENSPEMG00000030796) #20	Cabp2 (ENSPEMG00000005235) #21	Cdk2ap2 (ENSPEMG00000028665) #22	Pitpnm1 (ENSPEMG00000001355) #23	Aip (ENSPEMG00000005397) #24	Tmem134 (ENSPEMG00000008430) #25	Cabp4 (ENSPEMG00000008224) #26	Gpr152 (ENSPEMG00000008897) #27	Coro1b (ENSPEMG00000011980) #28	Ptprcap (ENSPEMG00000029717) #29	Rps6kb2 (ENSPEMG00000016166) #30	Carns1 (ENSPEMG00000010758) #31	Tbc1d10c (ENSPEMG00000013534) #32	Ppp1ca (ENSPEMG00000009056) #33	Rad9a (ENSPEMG00000006275) #34	Clcf1 (ENSPEMG00000008786) #35	Pold4 (ENSPEMG00000025422) #36	Ssh3 (ENSPEMG00000018081) #37
Prairie vole	MODERN SPECIES	16	Chka (ENSMOCG00000007076)	Tcirg1 (ENSMOCG00000005946)	ENSMOCG00000019842	Aldh3b1 (ENSMOCG00000020373) #8	Unc93b1 (ENSMOCG00000008961) #9	Aldh3b3 (ENSMOCG00000021302) #10	Aldh3b2 (ENSMOCG00000022624) #11	Acy3 (ENSMOCG00000016646) #12	Tbx10 (ENSMOCG00000018876) #13	Nudt8 (ENSMOCG00000002104) #14	Doc2g (ENSMOCG00000007770) #15	Ndufv1 (ENSMOCG00000018645) #16	ENSMOCG00000020246 #19	Gstp3 (ENSMOCG00000020117) #20	Cabp2 (ENSMOCG00000022563) #21	Cdk2ap2 (ENSMOCG00000011876) #22	Pitpnm1 (ENSMOCG00000006486) #23	Aip (ENSMOCG00000001242) #24	Tmem134 (ENSMOCG00000002494) #25	Cabp4 (ENSMOCG00000013395) #26	Gpr152 (ENSMOCG00000015199) #27	Coro1b (ENSMOCG00000015585) #28	Ptprcap (ENSMOCG00000021498) #29	Rps6kb2 (ENSMOCG00000006354) #30	ENSMOCG00000018725	Tbc1d10c (ENSMOCG00000022473) #32	ENSMOCG00000000843 #33	Rad9a (ENSMOCG00000011209) #34	Clcf1 (ENSMOCG00000019813) #35	Pold4 (ENSMOCG00000020727) #36	Ssh3 (ENSMOCG00000010426) #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641.b #16	ENSGT00390000010641.a ##16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Chinese hamster chok1gshd	MODERN SPECIES	401	Chka (ENSCGRG00001013471)	Tcirg1 (ENSCGRG00001015923)	Ndufs8 (ENSCGRG00001023988) #7	Aldh3b1 (ENSCGRG00001001915) #8	Unc93b1 (ENSCGRG00001017240) #9	Aldh3b3 (ENSCGRG00001006169) #10	Aldh3b2 (ENSCGRG00001013897) #11	Acy3 (ENSCGRG00001022288) #12	Tbx10 (ENSCGRG00001004850) #13	Nudt8 (ENSCGRG00001011961) #14	Doc2g (ENSCGRG00001018346) #15	Ndufv1 (ENSCGRG00001015739) #16	Gstp1 (ENSCGRG00001020577) #19	Gstp3 (ENSCGRG00001014473) #20	Cabp2 (ENSCGRG00001008642) #21	Cdk2ap2 (ENSCGRG00001012920) #22	Pitpnm1 (ENSCGRG00001023287) #23	Aip (ENSCGRG00001007960) #24	Tmem134 (ENSCGRG00001010615) #25	Cabp4 (ENSCGRG00001017640) #26	Gpr152 (ENSCGRG00001019323) #27	Coro1b (ENSCGRG00001004662) #28	Ptprcap (ENSCGRG00001010731) #29	Rps6kb2 (ENSCGRG00001000810) #30	Ssh3 (ENSCGRG00001013911) #37	Ankrd13d (ENSCGRG00001015858)	Grk2 (ENSCGRG00001017520)	Kdm2a (ENSCGRG00001022950)	Rhod (ENSCGRG00001010682)	Syt12 (ENSCGRG00001017074)	2010003K11Rik (ENSCGRG00001018760)
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000018025	Kmt5b (ENSMAUG00000018918)	Chka (ENSMAUG00000017295)	Ndufs8 (ENSMAUG00000017880) #7	Aldh3b1 (ENSMAUG00000017809) #8	Unc93b1 (ENSMAUG00000018290) #9	Aldh3b2 (ENSMAUG00000017545) #11	Acy3 (ENSMAUG00000017411) #12	Tbx10 (ENSMAUG00000019219) #13	Nudt8 (ENSMAUG00000017149) #14	Doc2g (ENSMAUG00000017758) #15	ENSMAUG00000017366 ##16	Gstp1 (ENSMAUG00000017855) #19	Gstp3 (ENSMAUG00000016934) #20	Cabp2 (ENSMAUG00000017000) #21	Cdk2ap2 (ENSMAUG00000017833) #22	Pitpnm1 (ENSMAUG00000016912) #23	Aip (ENSMAUG00000017268) #24	Tmem134 (ENSMAUG00000017612) #25	Cabp4 (ENSMAUG00000017898) #26	Gpr152 (ENSMAUG00000016522) #27	Coro1b (ENSMAUG00000016373) #28	Ptprcap (ENSMAUG00000017359) #29	Rps6kb2 (ENSMAUG00000017230) #30	Carns1 (ENSMAUG00000017398) #31	Tbc1d10c (ENSMAUG00000017190) #32	Ppp1ca (ENSMAUG00000016057) #33	Rad9a (ENSMAUG00000017164) #34	Clcf1 (ENSMAUG00000017012) #35	Pold4 (ENSMAUG00000016004) #36	Ssh3 (ENSMAUG00000016554) #37
Murinae	ANCESTRAL SPECIES		ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Mus	ANCESTRAL SPECIES		ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Ryukyu mouse	MODERN SPECIES	10	Tcirg1 (MGP_CAROLIEiJ_G0022473)	Ndufs8 (MGP_CAROLIEiJ_G0022474) #7	Aldh3b1 (MGP_CAROLIEiJ_G0022475) #8	Unc93b1 (MGP_CAROLIEiJ_G0022476) #9	MGP_CAROLIEiJ_G0022477	Aldh3b2 (MGP_CAROLIEiJ_G0022478) #11	Acy3 (MGP_CAROLIEiJ_G0022479) #12	Tbx10 (MGP_CAROLIEiJ_G0022480) #13	Nudt8 (MGP_CAROLIEiJ_G0022481) #14	Doc2g (MGP_CAROLIEiJ_G0022482) #15	Ndufv1 (MGP_CAROLIEiJ_G0022483) #16	MGP_CAROLIEiJ_G0022484 #19	MGP_CAROLIEiJ_G0022485 #19	Gstp3 (MGP_CAROLIEiJ_G0022486) #20	Cabp2 (MGP_CAROLIEiJ_G0022487) #21	Cdk2ap2 (MGP_CAROLIEiJ_G0022488) #22	Pitpnm1 (MGP_CAROLIEiJ_G0022489) #23	Aip (MGP_CAROLIEiJ_G0022490) #24	Cabp4 (MGP_CAROLIEiJ_G0022491) #26	Gpr152 (MGP_CAROLIEiJ_G0022492) #27	Coro1b (MGP_CAROLIEiJ_G0022493) #28	Ptprcap (MGP_CAROLIEiJ_G0022494) #29	Rps6kb2 (MGP_CAROLIEiJ_G0022495) #30	Carns1 (MGP_CAROLIEiJ_G0022496) #31	Tbc1d10c (MGP_CAROLIEiJ_G0022497) #32	Ppp1ca (MGP_CAROLIEiJ_G0022498) #33	Rad9a (MGP_CAROLIEiJ_G0022499) #34	Clcf1 (MGP_CAROLIEiJ_G0022500) #35	Pold4 (MGP_CAROLIEiJ_G0022501) #36	Ssh3 (MGP_CAROLIEiJ_G0022502) #37	Ankrd13d (MGP_CAROLIEiJ_G0022503)
Mus_B	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b.f #10	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Mouse	MODERN SPECIES	10	Tcirg1 (ENSMUSG00000001750)	Ndufs8 (ENSMUSG00000059734) #7	Aldh3b1 (ENSMUSG00000024885) #8	Unc93b1 (ENSMUSG00000036908) #9	Aldh3b3 (ENSMUSG00000037263) #10	Aldh3b2 (ENSMUSG00000075296) #11	Acy3 (ENSMUSG00000024866) #12	Tbx10 (ENSMUSG00000037477) #13	Nudt8 (ENSMUSG00000110949) #14	Doc2g (ENSMUSG00000024871) #15	Ndufv1 (ENSMUSG00000037916) #16	Gstp1 (ENSMUSG00000060803) #19	Gstp2 (ENSMUSG00000038155) #19	Gstp3 (ENSMUSG00000058216) #20	Cabp2 (ENSMUSG00000024857) #21	Cdk2ap2 (ENSMUSG00000024856) #22	Pitpnm1 (ENSMUSG00000024851) #23	Aip (ENSMUSG00000024847) #24	Tmem134 (ENSMUSG00000024845) #25	Cabp4 (ENSMUSG00000024842) #26	Gpr152 (ENSMUSG00000044724) #27	Coro1b (ENSMUSG00000024835) #28	Ptprcap (ENSMUSG00000045826) #29	Rps6kb2 (ENSMUSG00000024830) #30	Carns1 (ENSMUSG00000075289) #31	Tbc1d10c (ENSMUSG00000040247) #32	Ppp1ca (ENSMUSG00000040385) #33	Rad9a (ENSMUSG00000024824) #34	Clcf1 (ENSMUSG00000040663) #35	Gm45928 (ENSMUSG00000117873)	Pold4 (ENSMUSG00000024854) #36
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00920000150159	ENSGT00940000155904.e.b.e #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Steppe mouse	MODERN SPECIES	3175														Gstp3 (ENSMSIG00000006920) #20	ENSMSIG00000006735 #21	Cdk2ap2 (ENSMSIG00000006691) #22	Pitpnm1 (ENSMSIG00000006623) #23	ENSMSIG00000006607 #24	ENSMSIG00000006594 #25	Cabp4 (ENSMSIG00000006571) #26	Gpr152 (ENSMSIG00000006566) #27	Coro1b (ENSMSIG00000006535) #28	Ptprcap (ENSMSIG00000006524) #29	Rps6kb2 (ENSMSIG00000006398) #30	Carns1 (ENSMSIG00000006360) #31	Tbc1d10c (ENSMSIG00000006331) #32	Ppp1ca (ENSMSIG00000006291) #33	Rad9a (ENSMSIG00000006213) #34	Clcf1 (ENSMSIG00000006192) #35	Pold4 (ENSMSIG00000006171) #36	ENSMSIG00000005977 #37
spretus	MODERN SPECIES	10	Kmt5b (MGP_SPRETEiJ_G0023387)	Chka (MGP_SPRETEiJ_G0023388)	MGP_SPRETEiJ_G0023389 #11	Tcirg1 (MGP_SPRETEiJ_G0023390)	Ndufs8 (MGP_SPRETEiJ_G0023391) #7	Aldh3b1 (MGP_SPRETEiJ_G0023392) #8	Unc93b1 (MGP_SPRETEiJ_G0023393) #9	MGP_SPRETEiJ_G0023394	Acy3 (MGP_SPRETEiJ_G0023395) #12	Tbx10 (MGP_SPRETEiJ_G0023396) #13	Nudt8 (MGP_SPRETEiJ_G0023397) #14	Doc2g (MGP_SPRETEiJ_G0023398) #15	Ndufv1 (MGP_SPRETEiJ_G0023399) #16	Gstp3 (MGP_SPRETEiJ_G0023400) #20	Cabp2 (MGP_SPRETEiJ_G0023401) #21	Cdk2ap2 (MGP_SPRETEiJ_G0023402) #22	Pitpnm1 (MGP_SPRETEiJ_G0023403) #23	MGP_SPRETEiJ_G0023404 #24	Cabp4 (MGP_SPRETEiJ_G0023405) #26	Gpr152 (MGP_SPRETEiJ_G0023406) #27	Coro1b (MGP_SPRETEiJ_G0023407) #28	Ptprcap (MGP_SPRETEiJ_G0023408) #29	Rps6kb2 (MGP_SPRETEiJ_G0023409) #30	Carns1 (MGP_SPRETEiJ_G0023410) #31	Tbc1d10c (MGP_SPRETEiJ_G0023411) #32	Ppp1ca (MGP_SPRETEiJ_G0023412) #33	Rad9a (MGP_SPRETEiJ_G0023413) #34	Clcf1 (MGP_SPRETEiJ_G0023414) #35	Pold4 (MGP_SPRETEiJ_G0023415) #36	Ssh3 (MGP_SPRETEiJ_G0023416) #37	Ankrd13d (MGP_SPRETEiJ_G0023417)
Shrew mouse	MODERN SPECIES		Chka (MGP_PahariEiJ_G0013969)	Tcirg1 (MGP_PahariEiJ_G0013970)	Ndufs8 (MGP_PahariEiJ_G0013971) #7	Aldh3b1 (MGP_PahariEiJ_G0013972) #8	Unc93b1 (MGP_PahariEiJ_G0013973) #9	MGP_PahariEiJ_G0013974	Aldh3b2 (MGP_PahariEiJ_G0013975) #11	Acy3 (MGP_PahariEiJ_G0013976) #12	Tbx10 (MGP_PahariEiJ_G0013977) #13	Nudt8 (MGP_PahariEiJ_G0013978) #14	Doc2g (MGP_PahariEiJ_G0013979) #15	Ndufv1 (MGP_PahariEiJ_G0013980) #16	MGP_PahariEiJ_G0013981 #19	Gstp3 (MGP_PahariEiJ_G0013982) #20	Cabp2 (MGP_PahariEiJ_G0013983) #21	Cdk2ap2 (MGP_PahariEiJ_G0013984) #22	Pitpnm1 (MGP_PahariEiJ_G0013985) #23	Aip (MGP_PahariEiJ_G0013986) #24	Cabp4 (MGP_PahariEiJ_G0013987) #26	Gpr152 (MGP_PahariEiJ_G0013988) #27	MGP_PahariEiJ_G0013989 #28	Ptprcap (MGP_PahariEiJ_G0013990) #29	Rps6kb2 (MGP_PahariEiJ_G0013991) #30	Carns1 (MGP_PahariEiJ_G0013992) #31	Tbc1d10c (MGP_PahariEiJ_G0013993) #32	Ppp1ca (MGP_PahariEiJ_G0013994) #33	Rad9a (MGP_PahariEiJ_G0013995) #34	Clcf1 (MGP_PahariEiJ_G0013996) #35	Pold4 (MGP_PahariEiJ_G0013997) #36	Ssh3 (MGP_PahariEiJ_G0013998) #37	Ankrd13d (MGP_PahariEiJ_G0013999)
Rat	MODERN SPECIES		Ndufs8 (ENSRNOG00000017446) #7	Aldh3b1 (ENSRNOG00000017512) #8	Unc93b1 (ENSRNOG00000017703) #9	LOC120099971 (ENSRNOG00000017872) #10	ENSRNOG00000066970 #10	ENSRNOG00000069460 #8	Aldh3b2 (ENSRNOG00000068138) #11	Tbx10 (ENSRNOG00000017944) #13	Acy3 (ENSRNOG00000017901) #12	Nudt8 (ENSRNOG00000017955) #14	Doc2g (ENSRNOG00000018029) #15	Ndufv1 (ENSRNOG00000018117) #16	Gstp1 (ENSRNOG00000018237) #19	Gstp3 (ENSRNOG00000018287) #20	Cabp2 (ENSRNOG00000018339) #21	Cdk2ap2 (ENSRNOG00000018391) #22	Pitpnm1 (ENSRNOG00000018553) #23	Aip (ENSRNOG00000022289) #24	Tmem134 (ENSRNOG00000022153) #25	Cabp4 (ENSRNOG00000022044) #26	Gpr152 (ENSRNOG00000021912) #27	Coro1b (ENSRNOG00000021828) #28	Ptprcap (ENSRNOG00000021724) #29	Rps6kb2 (ENSRNOG00000021689) #30	Carns1 (ENSRNOG00000018603) #31	Tbc1d10c (ENSRNOG00000021510) #32	Ppp1ca (ENSRNOG00000018708) #33	Rad9a (ENSRNOG00000018729) #34	Clcf1 (ENSRNOG00000018752) #35	Pold4 (ENSRNOG00000018765) #36	Ssh3 (ENSRNOG00000018878) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1818												Ndufv1 (ENSNGAG00000013048) #16	ENSNGAG00000014047 #19	Gstp3 (ENSNGAG00000000204) #20	Cabp2 (ENSNGAG00000014616) #21	Cdk2ap2 (ENSNGAG00000007775) #22	Pitpnm1 (ENSNGAG00000020386) #23	Aip (ENSNGAG00000020330) #24	Tmem134 (ENSNGAG00000017238) #25	Cabp4 (ENSNGAG00000015044) #26	Gpr152 (ENSNGAG00000008380) #27	Coro1b (ENSNGAG00000019821) #28	Ptprcap (ENSNGAG00000017126) #29	Rps6kb2 (ENSNGAG00000005545) #30	Carns1 (ENSNGAG00000011168) #31	ENSNGAG00000020645 #32	ENSNGAG00000015301 #33	Rad9a (ENSNGAG00000018044) #34	Clcf1 (ENSNGAG00000013064) #35	Pold4 (ENSNGAG00000010450) #36	Ssh3 (ENSNGAG00000000431) #37
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	60	ENSJJAG00000017165	Chka (ENSJJAG00000012227)	Tcirg1 (ENSJJAG00000017427)	Ndufs8 (ENSJJAG00000005023) #7	Aldh3b1 (ENSJJAG00000020011) #8	Unc93b1 (ENSJJAG00000023583) #9	ENSJJAG00000023409 #11	Acy3 (ENSJJAG00000019193) #12	Tbx10 (ENSJJAG00000022634) #13	Nudt8 (ENSJJAG00000023328) #14	Doc2g (ENSJJAG00000021341) #15	Ndufv1 (ENSJJAG00000017874) #16	ENSJJAG00000023512 #19	Gstp3 (ENSJJAG00000024233) #20	Cabp2 (ENSJJAG00000018419) #21	ENSJJAG00000013896 #22	ENSJJAG00000003374 #23	Aip (ENSJJAG00000015345) #24	Tmem134 (ENSJJAG00000016692) #25	Cabp4 (ENSJJAG00000011101) #26	Gpr152 (ENSJJAG00000022981) #27	ENSJJAG00000001838 #28	ENSJJAG00000016182 #30	Carns1 (ENSJJAG00000018930) #31	Tbc1d10c (ENSJJAG00000004622) #32	Ppp1ca (ENSJJAG00000010290) #33	Rad9a (ENSJJAG00000013292) #34	Clcf1 (ENSJJAG00000019178) #35	Pold4 (ENSJJAG00000015752) #36	Ssh3 (ENSJJAG00000013515) #37	Ankrd13d (ENSJJAG00000020972)
Lesser Egyptian jerboa	MODERN SPECIES	176																ENSJJAG00000013797 #22	Slc24a5 (ENSJJAG00000017458)	ENSJJAG00000015428	Ctxn2 (ENSJJAG00000013770)	Slc12a1 (ENSJJAG00000009847)	Fbn1 (ENSJJAG00000018173)	Eid1 (ENSJJAG00000022180)	Shc4 (ENSJJAG00000021146)	ENSJJAG00000017576	Secisbp2l (ENSJJAG00000014644)	Cops2 (ENSJJAG00000012737)	ENSJJAG00000012276	ENSJJAG00000011858	ENSJJAG00000011328	Galk2 (ENSJJAG00000010967)	Fgf7 (ENSJJAG00000010425)
Kangaroo rat	MODERN SPECIES	373	ENSDORG00000015449	Chka (ENSDORG00000012471)	Tcirg1 (ENSDORG00000012469)	ENSDORG00000003567	Aldh3b1 (ENSDORG00000003566) #8	Unc93b1 (ENSDORG00000003564) #9	ENSDORG00000027104 #11	Acy3 (ENSDORG00000027105) #12	Tbx10 (ENSDORG00000010070) #13	ENSDORG00000010072	Doc2g (ENSDORG00000026896) #15	Ndufv1 (ENSDORG00000010074) #16	ENSDORG00000002063 #19	Gstp3 (ENSDORG00000024771) #20	Cabp2 (ENSDORG00000014527) #21	Cdk2ap2 (ENSDORG00000025739) #22	ENSDORG00000014531 #23	Aip (ENSDORG00000014533) #24	Tmem134 (ENSDORG00000014535) #25	Cabp4 (ENSDORG00000014536) #26	Gpr152 (ENSDORG00000028173) #27	ENSDORG00000014537 #28	Ptprcap (ENSDORG00000014538) #29	Rps6kb2 (ENSDORG00000014540) #30	ENSDORG00000014541	Tbc1d10c (ENSDORG00000029199) #32	ENSDORG00000012300 #33	Rad9a (ENSDORG00000012297) #34	Clcf1 (ENSDORG00000015120) #35	Pold4 (ENSDORG00000023882) #36	Ssh3 (ENSDORG00000010943) #37
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Sciuridae	ANCESTRAL SPECIES	22	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005024959	CHKA (ENSSVLG00005025020)	ENSSVLG00005025068	ENSSVLG00005025100	NDUFS8 (ENSSVLG00005025114) #7	ALDH3B1 (ENSSVLG00005025147) #8	UNC93B1 (ENSSVLG00005025215) #9	ALDH3B2 (ENSSVLG00005025242) #11	ACY3 (ENSSVLG00005025257) #12	TBX10 (ENSSVLG00005025280)	ENSSVLG00005025291 #14	ENSSVLG00005025305 #15	NDUFV1 (ENSSVLG00005025325) #16	GSTP1 (ENSSVLG00005025366) #19	CABP2 (ENSSVLG00005025399) #21	ENSSVLG00005004797 #22	PITPNM1 (ENSSVLG00005004838) #23	AIP (ENSSVLG00005004870) #24	TMEM134 (ENSSVLG00005004915) #25	CABP4 (ENSSVLG00005004965) #26	CORO1B (ENSSVLG00005004995) #28	PTPRCAP (ENSSVLG00005005019) #29	RPS6KB2 (ENSSVLG00005005042) #30	CARNS1 (ENSSVLG00005005060) #31	TBC1D10C (ENSSVLG00005005134) #32	PPP1CA (ENSSVLG00005005219) #33	RAD9A (ENSSVLG00005005281) #34	CLCF1 (ENSSVLG00005005308) #35	POLD4 (ENSSVLG00005005332) #36	ENSSVLG00005005401	SSH3 (ENSSVLG00005005420) #37
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005009267	ENSSVLG00005009250	GALNT15 (ENSSVLG00005009222)	ENSSVLG00005009200	ENSSVLG00005009153	ENSSVLG00005009053	RFTN1 (ENSSVLG00005009013)	ENSSVLG00005008982	ENSSVLG00005008951	ENSSVLG00005008794	PLCL2 (ENSSVLG00005008741)	TBC1D5 (ENSSVLG00005008563)	SATB1 (ENSSVLG00005024270)	KCNH8 (ENSSVLG00005024188)	ENSSVLG00005024173	ENSSVLG00005024162 #22	EFHB (ENSSVLG00005024067)	RAB5A (ENSSVLG00005024015)	PP2D1 (ENSSVLG00005023998)	ENSSVLG00005023944	ENSSVLG00005023908	ENSSVLG00005023889	ENSSVLG00005023862	ENSSVLG00005023824	ZNF385D (ENSSVLG00005023781)	TOMM22 (ENSSVLG00005023755)	ENSSVLG00005023738	ENSSVLG00005023698	ENSSVLG00005023675	ENSSVLG00005023653	UBE2E2 (ENSSVLG00005023634)
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Arctic ground squirrel	MODERN SPECIES	172	LRP5 (ENSUPAG00010007453)	ENSUPAG00010007475	KMT5B (ENSUPAG00010007478)	CHKA (ENSUPAG00010007654)	TCIRG1 (ENSUPAG00010007691)	NDUFS8 (ENSUPAG00010007713) #7	ALDH3B1 (ENSUPAG00010007728) #8	UNC93B1 (ENSUPAG00010007746) #9	ACY3 (ENSUPAG00010007756) #12	ENSUPAG00010007771 #13	ENSUPAG00010007775 #14	ENSUPAG00010007785 #15	NDUFV1 (ENSUPAG00010007803) #16	GSTP1 (ENSUPAG00010007817) #19	CABP2 (ENSUPAG00010007845) #21	CDK2AP2 (ENSUPAG00010007891) #22	PITPNM1 (ENSUPAG00010007905) #23	AIP (ENSUPAG00010007946) #24	TMEM134 (ENSUPAG00010007965) #25	CABP4 (ENSUPAG00010007974) #26	GPR152 (ENSUPAG00010007987) #27	CORO1B (ENSUPAG00010007990) #28	PTPRCAP (ENSUPAG00010008006) #29	RPS6KB2 (ENSUPAG00010008011) #30	CARNS1 (ENSUPAG00010008057) #31	TBC1D10C (ENSUPAG00010008076) #32	PPP1CA (ENSUPAG00010008103) #33	RAD9A (ENSUPAG00010008112) #34	CLCF1 (ENSUPAG00010008123) #35	POLD4 (ENSUPAG00010008127) #36	SSH3 (ENSUPAG00010008136) #37
Squirrel	MODERN SPECIES	199	ENSSTOG00000012277	KMT5B (ENSSTOG00000024331)	ENSSTOG00000019647	CHKA (ENSSTOG00000011503)	TCIRG1 (ENSSTOG00000024529)	NDUFS8 (ENSSTOG00000011500) #7	ALDH3B1 (ENSSTOG00000015155) #8	UNC93B1 (ENSSTOG00000011497) #9	ACY3 (ENSSTOG00000015148) #12	TBX10 (ENSSTOG00000011629)	ENSSTOG00000024208 #14	ENSSTOG00000021128 #15	NDUFV1 (ENSSTOG00000005850) #16	GSTP1 (ENSSTOG00000025905) #19	CABP2 (ENSSTOG00000014876) #21	CDK2AP2 (ENSSTOG00000024042) #22	PITPNM1 (ENSSTOG00000027855) #23	AIP (ENSSTOG00000015721) #24	TMEM134 (ENSSTOG00000015718) #25	CABP4 (ENSSTOG00000019909) #26	GPR152 (ENSSTOG00000031517) #27	CORO1B (ENSSTOG00000015711) #28	PTPRCAP (ENSSTOG00000032084) #29	RPS6KB2 (ENSSTOG00000026088) #30	CARNS1 (ENSSTOG00000026187) #31	TBC1D10C (ENSSTOG00000015704) #32	PPP1CA (ENSSTOG00000019550) #33	RAD9A (ENSSTOG00000021365) #34	CLCF1 (ENSSTOG00000015702) #35	POLD4 (ENSSTOG00000015701) #36	SSH3 (ENSSTOG00000015693) #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Guinea pig	MODERN SPECIES	42	ENSCPOG00000000621	KMT5B (ENSCPOG00000002147)	CHKA (ENSCPOG00000022236)	TCIRG1 (ENSCPOG00000001417)	NDUFS8 (ENSCPOG00000001416) #7	ALDH3B1 (ENSCPOG00000021502) #8	UNC93B1 (ENSCPOG00000026431) #9	ALDH3B2 (ENSCPOG00000002523) #11	ACY3 (ENSCPOG00000002519) #12	TBX10 (ENSCPOG00000032079)	ENSCPOG00000002514 #14	ENSCPOG00000022649 #15	NDUFV1 (ENSCPOG00000006645) #16	GSTP1 (ENSCPOG00000020253) #19	CABP2 (ENSCPOG00000023151) #21	CDK2AP2 (ENSCPOG00000033165) #22	PITPNM1 (ENSCPOG00000011204) #23	AIP (ENSCPOG00000025197) #24	TMEM134 (ENSCPOG00000034721) #25	CABP4 (ENSCPOG00000038418) #26	GPR152 (ENSCPOG00000020561) #27	CORO1B (ENSCPOG00000010527) #28	PTPRCAP (ENSCPOG00000023825) #29	RPS6KB2 (ENSCPOG00000010518) #30	CARNS1 (ENSCPOG00000010514) #31	TBC1D10C (ENSCPOG00000011171) #32	PPP1CA (ENSCPOG00000032835) #33	RAD9A (ENSCPOG00000033699) #34	CLCF1 (ENSCPOG00000031948) #35	POLD4 (ENSCPOG00000039935) #36	SSH3 (ENSCPOG00000008616) #37
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Degu	MODERN SPECIES	59	ENSODEG00000017460	CHKA (ENSODEG00000017808)	TCIRG1 (ENSODEG00000017607)	ENSODEG00000017577 #7	ALDH3B1 (ENSODEG00000017474) #8	UNC93B1 (ENSODEG00000017652) #9	ENSODEG00000017464	ALDH3B2 (ENSODEG00000017453) #11	ACY3 (ENSODEG00000017439) #12	TBX10 (ENSODEG00000017601)	ENSODEG00000017697 #14	ENSODEG00000017660 #15	NDUFV1 (ENSODEG00000017535) #16	ENSODEG00000017726 #19	CABP2 (ENSODEG00000017525) #21	CDK2AP2 (ENSODEG00000017482) #22	ENSODEG00000017542 #23	ENSODEG00000017554 #24	ENSODEG00000017587 #25	CABP4 (ENSODEG00000017561) #26	GPR152 (ENSODEG00000017462) #27	ENSODEG00000017778 #28	PTPRCAP (ENSODEG00000017616) #29	RPS6KB2 (ENSODEG00000017566) #30	CARNS1 (ENSODEG00000017571) #31	TBC1D10C (ENSODEG00000017872) #32	ENSODEG00000017595 #33	RAD9A (ENSODEG00000017457) #34	CLCF1 (ENSODEG00000017639) #35	POLD4 (ENSODEG00000017608) #36	SSH3 (ENSODEG00000017507) #37
Long-tailed chinchilla	MODERN SPECIES	129	ENSCLAG00000017122	KMT5B (ENSCLAG00000016628)	CHKA (ENSCLAG00000014223)	TCIRG1 (ENSCLAG00000014792)	NDUFS8 (ENSCLAG00000017156) #7	ALDH3B1 (ENSCLAG00000016029) #8	UNC93B1 (ENSCLAG00000016729) #9	ALDH3B2 (ENSCLAG00000017296) #11	ACY3 (ENSCLAG00000016314) #12	TBX10 (ENSCLAG00000015667)	ENSCLAG00000016240 #14	ENSCLAG00000016785 #15	NDUFV1 (ENSCLAG00000016746) #16	GSTP1 (ENSCLAG00000015548) #19	CABP2 (ENSCLAG00000015734) #21	CDK2AP2 (ENSCLAG00000014787) #22	ENSCLAG00000015015 #23	AIP (ENSCLAG00000016600) #24	TMEM134 (ENSCLAG00000016841) #25	CABP4 (ENSCLAG00000016497) #26	GPR152 (ENSCLAG00000016443) #27	CORO1B (ENSCLAG00000015993) #28	RPS6KB2 (ENSCLAG00000016408) #30	PTPRCAP (ENSCLAG00000016874) #29	CARNS1 (ENSCLAG00000016069) #31	TBC1D10C (ENSCLAG00000014250) #32	PPP1CA (ENSCLAG00000014515) #33	RAD9A (ENSCLAG00000014799) #34	CLCF1 (ENSCLAG00000016411) #35	POLD4 (ENSCLAG00000016804) #36	SSH3 (ENSCLAG00000016225) #37
Naked mole-rat female	MODERN SPECIES	14	TCIRG1 (ENSHGLG00000018395)	NDUFS8 (ENSHGLG00000009570) #7	ALDH3B1 (ENSHGLG00000015602) #8	UNC93B1 (ENSHGLG00000011769) #9	ALDH3B2 (ENSHGLG00000010052) #11	ACY3 (ENSHGLG00000015831) #12	TBX10 (ENSHGLG00000015945)	NUDT8 (ENSHGLG00000047808)	ENSHGLG00000018636 #15	ENSHGLG00000048694	NDUFV1 (ENSHGLG00000042428) #16	GSTP1 (ENSHGLG00000018697) #19	ENSHGLG00000043193	ENSHGLG00000011960 #20	CABP2 (ENSHGLG00000006502) #21	CDK2AP2 (ENSHGLG00000008013) #22	PITPNM1 (ENSHGLG00000008671) #23	AIP (ENSHGLG00000010309) #24	TMEM134 (ENSHGLG00000046661)	CABP4 (ENSHGLG00000012191) #26	GPR152 (ENSHGLG00000020880) #27	CORO1B (ENSHGLG00000014004) #28	PTPRCAP (ENSHGLG00000038375) #29	RPS6KB2 (ENSHGLG00000011537) #30	CARNS1 (ENSHGLG00000015759) #31	TBC1D10C (ENSHGLG00000011863) #32	PPP1CA (ENSHGLG00000013028) #33	RAD9A (ENSHGLG00000013829) #34	CLCF1 (ENSHGLG00000009725) #35	POLD4 (ENSHGLG00000010576) #36	SSH3 (ENSHGLG00000011687) #37
Lagomorpha	ANCESTRAL SPECIES	439																ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24
Pika	MODERN SPECIES	4837															ENSOPRG00000002333	CDK2AP2 (ENSOPRG00000002323) #22	PITPNM1 (ENSOPRG00000002254) #23	AIP (ENSOPRG00000002244) #24
Tree shrew	MODERN SPECIES	5537															CABP2 (ENSTBEG00000005678) #21	CDK2AP2 (ENSTBEG00000005476) #22	PITPNM1 (ENSTBEG00000005091) #23	CABP4 (ENSTBEG00000005024) #26	CORO1B (ENSTBEG00000004619) #28	TBC1D10C (ENSTBEG00000004527) #32	PPP1CA (ENSTBEG00000004438) #33	CLCF1 (ENSTBEG00000004318) #35	POLD4 (ENSTBEG00000004226) #36	SSH3 (ENSTBEG00000004002) #37	GRK2 (ENSTBEG00000003700)	KDM2A (ENSTBEG00000003398)	RHOD (ENSTBEG00000003165)	SYT12 (ENSTBEG00000002982)	LRFN4 (ENSTBEG00000002925)	PC (ENSTBEG00000002657)	ENSTBEG00000002419
Primates	ANCESTRAL SPECIES		ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Strepsirrhini	ANCESTRAL SPECIES	35	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163374 #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37	ENSGT00950000182928.A.a.b
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37	ENSGT00950000182928.A.a.b
Greater bamboo lemur	MODERN SPECIES	1196						UNC93B1 (ENSPSMG00000017927) #9	ALDH3B2 (ENSPSMG00000017876) #11	ACY3 (ENSPSMG00000017835) #12	TBX10 (ENSPSMG00000017814)	ENSPSMG00000017796 #14	ENSPSMG00000017792 #15	NDUFV1 (ENSPSMG00000017743) #16	GSTP1 (ENSPSMG00000017706) #19	ENSPSMG00000017669 #20	CABP2 (ENSPSMG00000017650) #21	CDK2AP2 (ENSPSMG00000017631) #22	PITPNM1 (ENSPSMG00000017619) #23	AIP (ENSPSMG00000017577) #24	TMEM134 (ENSPSMG00000017552) #25	CABP4 (ENSPSMG00000017519) #26	CORO1B (ENSPSMG00000017512) #28	PTPRCAP (ENSPSMG00000017495) #29	RPS6KB2 (ENSPSMG00000017487) #30	CARNS1 (ENSPSMG00000017445) #31	TBC1D10C (ENSPSMG00000017434) #32	PPP1CA (ENSPSMG00000017392) #33	RAD9A (ENSPSMG00000017323) #34	CLCF1 (ENSPSMG00000017291) #35	POLD4 (ENSPSMG00000017275) #36	SSH3 (ENSPSMG00000017256) #37	ANKRD13D (ENSPSMG00000017212)
Coquerels sifaka	MODERN SPECIES	124	KMT5B (ENSPCOG00000028166)	CHKA (ENSPCOG00000027662)	TCIRG1 (ENSPCOG00000027699)	NDUFS8 (ENSPCOG00000000121) #7	ALDH3B1 (ENSPCOG00000028800) #8	UNC93B1 (ENSPCOG00000023404) #9	ALDH3B2 (ENSPCOG00000020768) #11	ACY3 (ENSPCOG00000016521) #12	ENSPCOG00000026012 #13	ENSPCOG00000017507 #14	ENSPCOG00000025071 #15	NDUFV1 (ENSPCOG00000016494) #16	GSTP1 (ENSPCOG00000025031) #19	ENSPCOG00000013544 #20	CABP2 (ENSPCOG00000027212) #21	CDK2AP2 (ENSPCOG00000017754) #22	PITPNM1 (ENSPCOG00000025532) #23	AIP (ENSPCOG00000027570) #24	TMEM134 (ENSPCOG00000014918) #25	CABP4 (ENSPCOG00000018937) #26	CORO1B (ENSPCOG00000014764) #28	PTPRCAP (ENSPCOG00000028437) #29	RPS6KB2 (ENSPCOG00000018557) #30	CARNS1 (ENSPCOG00000026244) #31	TBC1D10C (ENSPCOG00000021827) #32	PPP1CA (ENSPCOG00000026258) #33	RAD9A (ENSPCOG00000021291) #34	CLCF1 (ENSPCOG00000020098) #35	POLD4 (ENSPCOG00000023695) #36	SSH3 (ENSPCOG00000015771) #37	ANKRD13D (ENSPCOG00000022746)
Mouse lemur	MODERN SPECIES	27	C11orf24 (ENSMICG00000035582)	KMT5B (ENSMICG00000028472)	CHKA (ENSMICG00000009554)	TCIRG1 (ENSMICG00000009530)	ENSMICG00000009523 #7	ALDH3B1 (ENSMICG00000009516) #8	UNC93B1 (ENSMICG00000009511) #9	ALDH3B2 (ENSMICG00000002573) #11	ACY3 (ENSMICG00000010175) #12	ENSMICG00000038049 #13	ENSMICG00000031375 #14	ENSMICG00000034887 #15	NDUFV1 (ENSMICG00000038015) #16	GSTP1 (ENSMICG00000035404) #19	CABP2 (ENSMICG00000006052) #21	CDK2AP2 (ENSMICG00000029533) #22	PITPNM1 (ENSMICG00000004138) #23	AIP (ENSMICG00000037390) #24	TMEM134 (ENSMICG00000031454) #25	CABP4 (ENSMICG00000004133) #26	CORO1B (ENSMICG00000004114) #28	RPS6KB2 (ENSMICG00000004111) #30	CARNS1 (ENSMICG00000004109) #31	TBC1D10C (ENSMICG00000004107) #32	PPP1CA (ENSMICG00000004103) #33	RAD9A (ENSMICG00000035662) #34	CLCF1 (ENSMICG00000029277) #35	POLD4 (ENSMICG00000004091) #36	ENSMICG00000012349	SSH3 (ENSMICG00000004087) #37	ANKRD13D (ENSMICG00000004074)
Bushbaby	MODERN SPECIES	249	C11orf24 (ENSOGAG00000032648)	KMT5B (ENSOGAG00000025516)	CHKA (ENSOGAG00000000790)	TCIRG1 (ENSOGAG00000028104)	NDUFS8 (ENSOGAG00000013220) #7	ALDH3B1 (ENSOGAG00000000789) #8	UNC93B1 (ENSOGAG00000000787) #9	ALDH3B2 (ENSOGAG00000000786) #11	ACY3 (ENSOGAG00000000785) #12	ENSOGAG00000000784 #13	ENSOGAG00000000783 #14	ENSOGAG00000025265 #15	NDUFV1 (ENSOGAG00000000781) #16	ENSOGAG00000001869	CABP2 (ENSOGAG00000032757) #21	CDK2AP2 (ENSOGAG00000008275) #22	PITPNM1 (ENSOGAG00000008269) #23	AIP (ENSOGAG00000008266) #24	TMEM134 (ENSOGAG00000030275) #25	CABP4 (ENSOGAG00000010618) #26	GPR152 (ENSOGAG00000027135) #27	CORO1B (ENSOGAG00000008262) #28	PTPRCAP (ENSOGAG00000025048) #29	RPS6KB2 (ENSOGAG00000010658) #30	CARNS1 (ENSOGAG00000010654) #31	TBC1D10C (ENSOGAG00000031940) #32	PPP1CA (ENSOGAG00000033516) #33	RAD9A (ENSOGAG00000028665) #34	CLCF1 (ENSOGAG00000010653) #35	POLD4 (ENSOGAG00000028157) #36	SSH3 (ENSOGAG00000010647) #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Tarsier	MODERN SPECIES	1586															CABP2 (ENSTSYG00000032193) #21	CDK2AP2 (ENSTSYG00000011970) #22
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cebidae	ANCESTRAL SPECIES		ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334.g #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Capuchin	MODERN SPECIES	102	C11orf24 (ENSCCAG00000029246)	KMT5B (ENSCCAG00000022496)	CHKA (ENSCCAG00000036109)	ENSCCAG00000030447	ENSCCAG00000036231 #7	ALDH3B1 (ENSCCAG00000020585) #8	UNC93B1 (ENSCCAG00000034142) #9	ALDH3B2 (ENSCCAG00000025402) #11	ACY3 (ENSCCAG00000030848) #12	TBX10 (ENSCCAG00000035836)	ENSCCAG00000034598 #15	ENSCCAG00000024841 #14	NDUFV1 (ENSCCAG00000027983) #16	ENSCCAG00000037776	CABP2 (ENSCCAG00000018244) #21	ENSCCAG00000028353 #22	PITPNM1 (ENSCCAG00000031570) #23	AIP (ENSCCAG00000027474) #24	TMEM134 (ENSCCAG00000004430) #25	CABP4 (ENSCCAG00000027469) #26	GPR152 (ENSCCAG00000014617) #27	CORO1B (ENSCCAG00000019041) #28	PTPRCAP (ENSCCAG00000025867) #29	RPS6KB2 (ENSCCAG00000028374) #30	CARNS1 (ENSCCAG00000035608) #31	TBC1D10C (ENSCCAG00000028758) #32	PPP1CA (ENSCCAG00000020614) #33	RAD9A (ENSCCAG00000031278) #34	CLCF1 (ENSCCAG00000033675) #35	POLD4 (ENSCCAG00000019708) #36	SSH3 (ENSCCAG00000009573) #37
Bolivian squirrel monkey	MODERN SPECIES	184	KMT5B (ENSSBOG00000018620)	ENSSBOG00000014251	CHKA (ENSSBOG00000029779)	TCIRG1 (ENSSBOG00000029778)	NDUFS8 (ENSSBOG00000020737) #7	ALDH3B1 (ENSSBOG00000021610) #8	UNC93B1 (ENSSBOG00000027617) #9	ENSSBOG00000019661	ALDH3B2 (ENSSBOG00000022925) #11	ACY3 (ENSSBOG00000026048) #12	TBX10 (ENSSBOG00000027660)	ENSSBOG00000028474 #14	ENSSBOG00000030579 #16	GSTP1 (ENSSBOG00000031760) #19	CABP2 (ENSSBOG00000025484) #21	CDK2AP2 (ENSSBOG00000027862) #22	PITPNM1 (ENSSBOG00000014886) #23	AIP (ENSSBOG00000024333) #24	TMEM134 (ENSSBOG00000027525) #25	CABP4 (ENSSBOG00000022028) #26	CORO1B (ENSSBOG00000034400) #28	PTPRCAP (ENSSBOG00000021090) #29	RPS6KB2 (ENSSBOG00000025951) #30	CARNS1 (ENSSBOG00000032755) #31	TBC1D10C (ENSSBOG00000022365) #32	RAD9A (ENSSBOG00000030122) #34	CLCF1 (ENSSBOG00000025814) #35	POLD4 (ENSSBOG00000030107) #36	SSH3 (ENSSBOG00000034638) #37	ANKRD13D (ENSSBOG00000034525)	GRK2 (ENSSBOG00000027760)
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000160334.h #22
Capuchin	MODERN SPECIES	780																ENSCCAG00000010093 #22	ENSCCAG00000028629	ENSCCAG00000028674	ZNF595 (ENSCCAG00000020641)	ENSCCAG00000022352 ##33
Marmoset	MODERN SPECIES	2	ENSCJAG00000022979	CHKA (ENSCJAG00000015722)	TCIRG1 (ENSCJAG00000015705)	ENSCJAG00000015686 #7	ALDH3B1 (ENSCJAG00000015676) #8	UNC93B1 (ENSCJAG00000045026) #9	ALDH3B2 (ENSCJAG00000077097) #11	ACY3 (ENSCJAG00000070289) #12	TBX10 (ENSCJAG00000071274)	ENSCJAG00000041608 #14	NDUFV1 (ENSCJAG00000000839) #16	ENSCJAG00000031574	ENSCJAG00000000879	ENSCJAG00000000379	CABP2 (ENSCJAG00000000890) #21	CDK2AP2 (ENSCJAG00000044071) #22	PITPNM1 (ENSCJAG00000000908) #23	AIP (ENSCJAG00000000929) #24	TMEM134 (ENSCJAG00000000933) #25	CABP4 (ENSCJAG00000000939) #26	GPR152 (ENSCJAG00000000943) #27	CORO1B (ENSCJAG00000000945) #28	PTPRCAP (ENSCJAG00000000963) #29	RPS6KB2 (ENSCJAG00000000967) #30	CARNS1 (ENSCJAG00000000981) #31	TBC1D10C (ENSCJAG00000000998) #32	ENSCJAG00000000983 #33	CLCF1 (ENSCJAG00000042907) #35	POLD4 (ENSCJAG00000085771) #36	RAD9A (ENSCJAG00000047617) #34	SSH3 (ENSCJAG00000000956) #37
Mas night monkey	MODERN SPECIES	411	ENSANAG00000017977	KMT5B (ENSANAG00000029415)	CHKA (ENSANAG00000025868)	TCIRG1 (ENSANAG00000032110)	NDUFS8 (ENSANAG00000033484) #7	ALDH3B1 (ENSANAG00000022742) #8	UNC93B1 (ENSANAG00000026380) #9	ALDH3B2 (ENSANAG00000022991) #11	ACY3 (ENSANAG00000024838) #12	TBX10 (ENSANAG00000029548)	ENSANAG00000026791 #14	ENSANAG00000026619 #15	NDUFV1 (ENSANAG00000029177) #16	GSTP1 (ENSANAG00000031563) #19	CABP2 (ENSANAG00000030444) #21	CDK2AP2 (ENSANAG00000034157) #22	PITPNM1 (ENSANAG00000025829) #23	AIP (ENSANAG00000022168) #24	TMEM134 (ENSANAG00000033007) #25	GPR152 (ENSANAG00000030207) #27	CABP4 (ENSANAG00000024753) #26	CORO1B (ENSANAG00000021241) #28	PTPRCAP (ENSANAG00000032799) #29	ENSANAG00000029796 #30	CARNS1 (ENSANAG00000022851) #31	TBC1D10C (ENSANAG00000019534) #32	PPP1CA (ENSANAG00000023829) #33	RAD9A (ENSANAG00000026397) #34	CLCF1 (ENSANAG00000026225) #35	POLD4 (ENSANAG00000034188) #36	SSH3 (ENSANAG00000027661) #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Golden snub-nosed monkey	MODERN SPECIES	1279	C11orf24 (ENSRROG00000027402)	KMT5B (ENSRROG00000045691)	CHKA (ENSRROG00000016904)	TCIRG1 (ENSRROG00000035211)	NDUFS8 (ENSRROG00000035645) #7	ALDH3B1 (ENSRROG00000035472) #8	UNC93B1 (ENSRROG00000012536) #9	ALDH3B2 (ENSRROG00000030687) #11	ACY3 (ENSRROG00000039646) #12	TBX10 (ENSRROG00000039702)	NUDT8 (ENSRROG00000037097)	ENSRROG00000026586 #15	NDUFV1 (ENSRROG00000037664) #16	GSTP1 (ENSRROG00000027191) #19	CABP2 (ENSRROG00000037183) #21	CDK2AP2 (ENSRROG00000043366) #22	PITPNM1 (ENSRROG00000007043) #23	AIP (ENSRROG00000045104) #24	TMEM134 (ENSRROG00000040406) #25	CABP4 (ENSRROG00000039803) #26	CORO1B (ENSRROG00000039319) #28	PTPRCAP (ENSRROG00000015187) #29	RPS6KB2 (ENSRROG00000044662) #30	CARNS1 (ENSRROG00000005925) #31	TBC1D10C (ENSRROG00000019804) #32	PPP1CA (ENSRROG00000039846) #33	RAD9A (ENSRROG00000035222) #34	CLCF1 (ENSRROG00000045504) #35	POLD4 (ENSRROG00000037792) #36	SSH3 (ENSRROG00000036044) #37	ANKRD13D (ENSRROG00000041027)
Black snub-nosed monkey	MODERN SPECIES	1876	ENSRBIG00000037386	KMT5B (ENSRBIG00000037823)	CHKA (ENSRBIG00000024191)	TCIRG1 (ENSRBIG00000036654)	NDUFS8 (ENSRBIG00000026286) #7	ALDH3B1 (ENSRBIG00000031620) #8	UNC93B1 (ENSRBIG00000040314) #9	ALDH3B2 (ENSRBIG00000030727) #11	ACY3 (ENSRBIG00000001203) #12	TBX10 (ENSRBIG00000031114)	NUDT8 (ENSRBIG00000039414)	ENSRBIG00000031438 #15	NDUFV1 (ENSRBIG00000038931) #16	GSTP1 (ENSRBIG00000041246) #19	CABP2 (ENSRBIG00000042812) #21	CDK2AP2 (ENSRBIG00000010171) #22	PITPNM1 (ENSRBIG00000011676) #23	AIP (ENSRBIG00000036498) #24	TMEM134 (ENSRBIG00000030826) #25	CABP4 (ENSRBIG00000042584) #26	GPR152 (ENSRBIG00000041858) #27	CORO1B (ENSRBIG00000043610) #28	PTPRCAP (ENSRBIG00000044684) #29	RPS6KB2 (ENSRBIG00000036100) #30	CARNS1 (ENSRBIG00000040033) #31	TBC1D10C (ENSRBIG00000032877) #32	PPP1CA (ENSRBIG00000043947) #33	RAD9A (ENSRBIG00000032418) #34	CLCF1 (ENSRBIG00000029063) #35	POLD4 (ENSRBIG00000036506) #36	ENSRBIG00000029788
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Vervet Monkey	MODERN SPECIES		ENSCSAG00000008972	KMT5B (ENSCSAG00000008964)	CHKA (ENSCSAG00000008953)	TCIRG1 (ENSCSAG00000008911)	NDUFS8 (ENSCSAG00000008821) #7	ENSCSAG00000008797 ##11	UNC93B1 (ENSCSAG00000008748) #9	ALDH3B2 (ENSCSAG00000008743) #11	ACY3 (ENSCSAG00000008735) #12	TBX10 (ENSCSAG00000008726)	ENSCSAG00000008710 #14	ENSCSAG00000008700 #15	NDUFV1 (ENSCSAG00000008693) #16	GSTP1 (ENSCSAG00000008684) #19	CABP2 (ENSCSAG00000008676) #21	CDK2AP2 (ENSCSAG00000008667) #22	PITPNM1 (ENSCSAG00000008662) #23	AIP (ENSCSAG00000008652) #24	TMEM134 (ENSCSAG00000008641) #25	CABP4 (ENSCSAG00000008624) #26	GPR152 (ENSCSAG00000018962) #27	CORO1B (ENSCSAG00000008604) #28	PTPRCAP (ENSCSAG00000019165) #29	RPS6KB2 (ENSCSAG00000008598) #30	CARNS1 (ENSCSAG00000008580) #31	TBC1D10C (ENSCSAG00000008558) #32	PPP1CA (ENSCSAG00000008548) #33	RAD9A (ENSCSAG00000008542) #34	CLCF1 (ENSCSAG00000008530) #35	POLD4 (ENSCSAG00000008521) #36	SSH3 (ENSCSAG00000008510) #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Pig-tailed macaque	MODERN SPECIES	433	ENSMNEG00000035330	KMT5B (ENSMNEG00000028922)	CHKA (ENSMNEG00000041615)	TCIRG1 (ENSMNEG00000044486)	NDUFS8 (ENSMNEG00000029160) #7	ENSMNEG00000044884 ##11	UNC93B1 (ENSMNEG00000042693) #9	ALDH3B2 (ENSMNEG00000042334) #11	ACY3 (ENSMNEG00000041493) #12	TBX10 (ENSMNEG00000032749)	NUDT8 (ENSMNEG00000041484)	ENSMNEG00000033340 #15	NDUFV1 (ENSMNEG00000041086) #16	GSTP1 (ENSMNEG00000044300) #19	CABP2 (ENSMNEG00000045390) #21	CDK2AP2 (ENSMNEG00000042636) #22	PITPNM1 (ENSMNEG00000043351) #23	AIP (ENSMNEG00000039995) #24	TMEM134 (ENSMNEG00000041551) #25	CABP4 (ENSMNEG00000032138) #26	GPR152 (ENSMNEG00000030403) #27	CORO1B (ENSMNEG00000044473) #28	PTPRCAP (ENSMNEG00000043708) #29	RPS6KB2 (ENSMNEG00000032247) #30	CARNS1 (ENSMNEG00000038393) #31	TBC1D10C (ENSMNEG00000031857) #32	PPP1CA (ENSMNEG00000042253) #33	CLCF1 (ENSMNEG00000034658) #35	POLD4 (ENSMNEG00000013342) #36	RAD9A (ENSMNEG00000043395) #34	SSH3 (ENSMNEG00000031930) #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00940000173013	ENSGT00390000005096 #36
Rhesus	MODERN SPECIES	5	KMT5B (ENSMMUG00000014237)	CHKA (ENSMMUG00000023192)	TCIRG1 (ENSMMUG00000023190)	NDUFS8 (ENSMMUG00000023189) #7	ALDH3B1 (ENSMMUG00000023188) ##11	UNC93B1 (ENSMMUG00000023184) #9	ALDH3B2 (ENSMMUG00000018533) #11	ACY3 (ENSMMUG00000039824) #12	TBX10 (ENSMMUG00000056105)	NUDT8 (ENSMMUG00000042611)	ENSMMUG00000062171	DOC2G (ENSMMUG00000018527) #15	NDUFV1 (ENSMMUG00000018526) #16	GSTP1 (ENSMMUG00000018524) #19	CABP2 (ENSMMUG00000011828) #21	CDK2AP2 (ENSMMUG00000057395) #22	PITPNM1 (ENSMMUG00000011821) #23	AIP (ENSMMUG00000011817) #24	TMEM134 (ENSMMUG00000005493) #25	CABP4 (ENSMMUG00000052347) #26	GPR152 (ENSMMUG00000005489) #27	ENSMMUG00000053378	CORO1B (ENSMMUG00000005488) #28	PTPRCAP (ENSMMUG00000005486) #29	RPS6KB2 (ENSMMUG00000005483) #30	CARNS1 (ENSMMUG00000005480) #31	TBC1D10C (ENSMMUG00000017280) #32	PPP1CA (ENSMMUG00000017278) #33	RAD9A (ENSMMUG00000017275) #34	POLD4 (ENSMMUG00000004523) #36	SSH3 (ENSMMUG00000015932) #37
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000008768	KMT5B (ENSMFAG00000030851)	CHKA (ENSMFAG00000032927)	TCIRG1 (ENSMFAG00000030577)	NDUFS8 (ENSMFAG00000035405) #7	ENSMFAG00000001507 ##11	UNC93B1 (ENSMFAG00000043671) #9	ALDH3B2 (ENSMFAG00000044295) #11	ACY3 (ENSMFAG00000046339) #12	TBX10 (ENSMFAG00000007056)	NDUFV1 (ENSMFAG00000038730) #16	ENSMFAG00000061940	ENSMFAG00000051463	GSTP1 (ENSMFAG00000032564) #19	CABP2 (ENSMFAG00000003212) #21	CDK2AP2 (ENSMFAG00000033158) #22	PITPNM1 (ENSMFAG00000046144) #23	AIP (ENSMFAG00000034062) #24	TMEM134 (ENSMFAG00000030408) #25	ENSMFAG00000056898	CABP4 (ENSMFAG00000038440) #26	CORO1B (ENSMFAG00000037995) #28	RPS6KB2 (ENSMFAG00000031507) #30	ENSMFAG00000051490	CARNS1 (ENSMFAG00000046293) #31	TBC1D10C (ENSMFAG00000045050) #32	PPP1CA (ENSMFAG00000001854) #33	RAD9A (ENSMFAG00000041314) #34	ENSMFAG00000053215	CLCF1 (ENSMFAG00000039712) #35	ENSMFAG00000045971
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00940000153377.B.e	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Olive baboon	MODERN SPECIES	3	ENSPANG00000003110	ENSPANG00000047861	CHKA (ENSPANG00000015385)	TCIRG1 (ENSPANG00000012975)	ALDH3B1 (ENSPANG00000010862) #8	UNC93B1 (ENSPANG00000025891) #9	ENSPANG00000049723	ENSPANG00000046704 #11	ACY3 (ENSPANG00000024740) #12	TBX10 (ENSPANG00000006501)	NUDT8 (ENSPANG00000009837)	ENSPANG00000008595 #15	NDUFV1 (ENSPANG00000011236) #16	GSTP1 (ENSPANG00000004067) #19	CABP2 (ENSPANG00000026467) #21	CDK2AP2 (ENSPANG00000004749) #22	PITPNM1 (ENSPANG00000015330) #23	AIP (ENSPANG00000006615) #24	TMEM134 (ENSPANG00000007007) #25	CABP4 (ENSPANG00000011704) #26	GPR152 (ENSPANG00000012974) #27	CORO1B (ENSPANG00000015784) #28	PTPRCAP (ENSPANG00000004926) #29	RPS6KB2 (ENSPANG00000011196) #30	CARNS1 (ENSPANG00000011528) #31	TBC1D10C (ENSPANG00000006614) #32	PPP1CA (ENSPANG00000009836) #33	RAD9A (ENSPANG00000003109) #34	CLCF1 (ENSPANG00000022856) #35	POLD4 (ENSPANG00000007733) #36	SSH3 (ENSPANG00000023601) #37
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00940000153377.B.e	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Drill	MODERN SPECIES	942	LRP5 (ENSMLEG00000011072)	ENSMLEG00000038166	KMT5B (ENSMLEG00000035508)	CHKA (ENSMLEG00000043175)	TCIRG1 (ENSMLEG00000010508)	NDUFS8 (ENSMLEG00000031739) #7	ALDH3B1 (ENSMLEG00000025945) #8	UNC93B1 (ENSMLEG00000037140) #9	ALDH3B2 (ENSMLEG00000028402) #11	ACY3 (ENSMLEG00000031989) #12	ENSMLEG00000030742 #13	NUDT8 (ENSMLEG00000008171)	NDUFV1 (ENSMLEG00000041364) #16	GSTP1 (ENSMLEG00000007972) #19	CABP2 (ENSMLEG00000010923) #21	CDK2AP2 (ENSMLEG00000040207) #22	PITPNM1 (ENSMLEG00000030151) #23	AIP (ENSMLEG00000031372) #24	TMEM134 (ENSMLEG00000027441) #25	CABP4 (ENSMLEG00000030918) #26	GPR152 (ENSMLEG00000019825) #27	CORO1B (ENSMLEG00000031164) #28	PTPRCAP (ENSMLEG00000032460) #29	RPS6KB2 (ENSMLEG00000028690) #30	CARNS1 (ENSMLEG00000041533) #31	TBC1D10C (ENSMLEG00000043951) #32	PPP1CA (ENSMLEG00000028349) #33	RAD9A (ENSMLEG00000033976) #34	CLCF1 (ENSMLEG00000000061) #35	POLD4 (ENSMLEG00000039964) #36	ENSMLEG00000024669
Sooty mangabey	MODERN SPECIES	518	ENSCATG00000042618	KMT5B (ENSCATG00000042964)	CHKA (ENSCATG00000041180)	TCIRG1 (ENSCATG00000031312)	NDUFS8 (ENSCATG00000042587) #7	ALDH3B1 (ENSCATG00000030949) #8	UNC93B1 (ENSCATG00000037367) #9	ALDH3B2 (ENSCATG00000015105) #11	ACY3 (ENSCATG00000030863) #12	TBX10 (ENSCATG00000029511)	NUDT8 (ENSCATG00000029910)	ENSCATG00000030569 #15	NDUFV1 (ENSCATG00000028405) #16	GSTP1 (ENSCATG00000032849) #19	CABP2 (ENSCATG00000029380) #21	CDK2AP2 (ENSCATG00000036893) #22	PITPNM1 (ENSCATG00000039132) #23	AIP (ENSCATG00000030555) #24	TMEM134 (ENSCATG00000041128) #25	CABP4 (ENSCATG00000038209) #26	CORO1B (ENSCATG00000039163) #28	PTPRCAP (ENSCATG00000041535) #29	RPS6KB2 (ENSCATG00000031028) #30	CARNS1 (ENSCATG00000032796) #31	TBC1D10C (ENSCATG00000035510) #32	PPP1CA (ENSCATG00000031120) #33	RAD9A (ENSCATG00000020148) #34	CLCF1 (ENSCATG00000041096) #35	POLD4 (ENSCATG00000035283) #36	SSH3 (ENSCATG00000039482) #37	ANKRD13D (ENSCATG00000030715)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Orangutan	MODERN SPECIES	2	PPP6R3 (ENSPPYG00000002970)	LRP5 (ENSPPYG00000036218)	C11orf24 (ENSPPYG00000002972)	KMT5B (ENSPPYG00000002973)	CHKA (ENSPPYG00000002974)	NDUFS8 (ENSPPYG00000002976) #7	ALDH3B1 (ENSPPYG00000002977) #8	UNC93B1 (ENSPPYG00000020003) #9	ALDH3B2 (ENSPPYG00000038703) #11	ACY3 (ENSPPYG00000002980) #12	TBX10 (ENSPPYG00000002981)	NUDT8 (ENSPPYG00000029677)	NDUFV1 (ENSPPYG00000002983) #16	GSTP1 (ENSPPYG00000002985) #19	CABP2 (ENSPPYG00000002986) #21	CDK2AP2 (ENSPPYG00000002987) #22	PITPNM1 (ENSPPYG00000002988) #23	AIP (ENSPPYG00000002989) #24	TMEM134 (ENSPPYG00000004100) #25	CABP4 (ENSPPYG00000002990) #26	GPR152 (ENSPPYG00000002991) #27	CORO1B (ENSPPYG00000002992) #28	PTPRCAP (ENSPPYG00000037728) #29	RPS6KB2 (ENSPPYG00000002993) #30	CARNS1 (ENSPPYG00000029387) #31	TBC1D10C (ENSPPYG00000002994) #32	PPP1CA (ENSPPYG00000002995) #33	RAD9A (ENSPPYG00000002996) #34	CLCF1 (ENSPPYG00000036168) #35	ENSPPYG00000034141	SSH3 (ENSPPYG00000002998) #37
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334.i #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a.b #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Gorilla	MODERN SPECIES	2	KMT5B (ENSGGOG00000004122)	TCIRG1 (ENSGGOG00000005005)	NDUFS8 (ENSGGOG00000005001) #7	ALDH3B1 (ENSGGOG00000004995) #8	ENSGGOG00000025959 #9	ENSGGOG00000003630	ENSGGOG00000038633	ALDH3B2 (ENSGGOG00000015729) #11	ACY3 (ENSGGOG00000011979) #12	TBX10 (ENSGGOG00000011961)	NUDT8 (ENSGGOG00000011953)	ENSGGOG00000023590 #15	NDUFV1 (ENSGGOG00000011943) #16	GSTP1 (ENSGGOG00000013849) #19	ENSGGOG00000010165 #21	CDK2AP2 (ENSGGOG00000010159) #22	PITPNM1 (ENSGGOG00000010148) #23	AIP (ENSGGOG00000010142) #24	TMEM134 (ENSGGOG00000042077) #25	CABP4 (ENSGGOG00000010025) #26	GPR152 (ENSGGOG00000010019) #27	CORO1B (ENSGGOG00000010013) #28	PTPRCAP (ENSGGOG00000010011) #29	RPS6KB2 (ENSGGOG00000009999) #30	CARNS1 (ENSGGOG00000009995) #31	TBC1D10C (ENSGGOG00000009988) #32	PPP1CA (ENSGGOG00000009981) #33	ENSGGOG00000039742 #34	RAD9A (ENSGGOG00000009974) #34	ENSGGOG00000008219 #35	POLD4 (ENSGGOG00000016028) #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334.i #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a.b #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Human	MODERN SPECIES	2	LRP5 (ENSG00000162337)	C11orf24 (ENSG00000171067)	KMT5B (ENSG00000110066)	CHKA (ENSG00000110721)	TCIRG1 (ENSG00000110719)	NDUFS8 (ENSG00000110717) #7	ALDH3B1 (ENSG00000006534) #8	UNC93B1 (ENSG00000110057) #9	ALDH3B2 (ENSG00000132746) #11	ACY3 (ENSG00000132744) #12	TBX10 (ENSG00000167800)	NUDT8 (ENSG00000167799)	NDUFV1 (ENSG00000167792) #16	GSTP1 (ENSG00000084207) #19	CABP2 (ENSG00000167791) #21	CDK2AP2 (ENSG00000167797) #22	PITPNM1 (ENSG00000110697) #23	AIP (ENSG00000110711) #24	TMEM134 (ENSG00000172663) #25	CABP4 (ENSG00000175544) #26	GPR152 (ENSG00000175514) #27	CORO1B (ENSG00000172725) #28	PTPRCAP (ENSG00000213402) #29	RPS6KB2 (ENSG00000175634) #30	CARNS1 (ENSG00000172508) #31	TBC1D10C (ENSG00000175463) #32	PPP1CA (ENSG00000172531) #33	CLCF1 (ENSG00000175505) #35	ENSG00000256514	POLD4 (ENSG00000175482) #36	RAD9A (ENSG00000172613) #34
Pan	ANCESTRAL SPECIES	1	ENSGT00910000148520	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00390000005254.j	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334.i #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a.b #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Bonobo	MODERN SPECIES	2	KMT5B (ENSPPAG00000038672)	ENSPPAG00000036484	CHKA (ENSPPAG00000037771)	TCIRG1 (ENSPPAG00000030122)	NDUFS8 (ENSPPAG00000039231) #7	ALDH3B1 (ENSPPAG00000030155) #8	UNC93B1 (ENSPPAG00000031688) #9	ENSPPAG00000027946	ALDH3B2 (ENSPPAG00000032213) #11	ACY3 (ENSPPAG00000031478) #12	TBX10 (ENSPPAG00000030171)	NUDT8 (ENSPPAG00000043158)	NDUFV1 (ENSPPAG00000043544) #16	GSTP1 (ENSPPAG00000043169) #19	ENSPPAG00000043180 #21	CDK2AP2 (ENSPPAG00000043090) #22	PITPNM1 (ENSPPAG00000044125) #23	AIP (ENSPPAG00000026775) #24	TMEM134 (ENSPPAG00000038698) #25	CABP4 (ENSPPAG00000031081) #26	GPR152 (ENSPPAG00000008770) #27	CORO1B (ENSPPAG00000030008) #28	PTPRCAP (ENSPPAG00000044074) #29	RPS6KB2 (ENSPPAG00000006795) #30	CARNS1 (ENSPPAG00000032452) #31	TBC1D10C (ENSPPAG00000042701) #32	PPP1CA (ENSPPAG00000023894) #33	RAD9A (ENSPPAG00000031016) #34	ENSPPAG00000035536 #35	POLD4 (ENSPPAG00000035704) #36	SSH3 (ENSPPAG00000016898) #37
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000051044	CHKA (ENSPTRG00000003980)	TCIRG1 (ENSPTRG00000003979)	NDUFS8 (ENSPTRG00000003978) #7	ALDH3B1 (ENSPTRG00000051435) #8	UNC93B1 (ENSPTRG00000003975) #9	ENSPTRG00000044434	ALDH3B2 (ENSPTRG00000003974) #11	ACY3 (ENSPTRG00000003973) #12	TBX10 (ENSPTRG00000003972)	NUDT8 (ENSPTRG00000003971)	DOC2G (ENSPTRG00000052755) #15	NDUFV1 (ENSPTRG00000003969) #16	GSTP1 (ENSPTRG00000003968) #19	CABP2 (ENSPTRG00000003967) #21	CDK2AP2 (ENSPTRG00000003966) #22	PITPNM1 (ENSPTRG00000003965) #23	AIP (ENSPTRG00000003964) #24	TMEM134 (ENSPTRG00000003963) #25	CABP4 (ENSPTRG00000050164) #26	GPR152 (ENSPTRG00000003960) #27	CORO1B (ENSPTRG00000003959) #28	PTPRCAP (ENSPTRG00000033878) #29	RPS6KB2 (ENSPTRG00000003957) #30	CARNS1 (ENSPTRG00000028514) #31	TBC1D10C (ENSPTRG00000003954) #32	PPP1CA (ENSPTRG00000005449) #33	RAD9A (ENSPTRG00000044525) #34	CLCF1 (ENSPTRG00000047312) #35	POLD4 (ENSPTRG00000003950) #36	SSH3 (ENSPTRG00000003949) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00940000160334.j #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00940000160334.j #22
Pan	ANCESTRAL SPECIES																	ENSGT00940000160334.j #22
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	11	ID1 (ENSPTRG00000013357)	ENSPTRG00000047072	ENSPTRG00000013356	REM1 (ENSPTRG00000013354)	DEFB124 (ENSPTRG00000013353)	DEFB123 (ENSPTRG00000013352)	DEFB121 (ENSPTRG00000030595)	DEFB119 (ENSPTRG00000013351)	DEFB118 (ENSPTRG00000045857)	DEFB116 (ENSPTRG00000032541)	ENSPTRG00000047609	DEFB115 (ENSPTRG00000033694)	ENSPTRG00000047765	ENSPTRG00000052363	ENSPTRG00000013348	ENSPTRG00000046147 #22	ENSPTRG00000050144	ENSPTRG00000051131	ENSPTRG00000046440	ENSPTRG00000051273	ENSPTRG00000044519	ENSPTRG00000043041	ENSPTRG00000043123	ENSPTRG00000046023	ENSPTRG00000048366	ZNF337 (ENSPTRG00000013344)	NANP (ENSPTRG00000044350)	NINL (ENSPTRG00000013342)	GINS1 (ENSPTRG00000050964)	ABHD12 (ENSPTRG00000013340)	PYGB (ENSPTRG00000049662)
Chimpanzee	MODERN SPECIES	939																ENSPTRG00000051484 #22
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	19	LRP5 (ENSNLEG00000006550)	C11orf24 (ENSNLEG00000006549)	KMT5B (ENSNLEG00000033680)	CHKA (ENSNLEG00000006538)	TCIRG1 (ENSNLEG00000006527)	NDUFS8 (ENSNLEG00000006525) #7	ALDH3B1 (ENSNLEG00000006517) #8	UNC93B1 (ENSNLEG00000006504) #9	ALDH3B2 (ENSNLEG00000006499) #11	ACY3 (ENSNLEG00000006494) #12	ENSNLEG00000006493	ENSNLEG00000028816 #15	NDUFV1 (ENSNLEG00000006458) #16	ENSNLEG00000006448	ENSNLEG00000006441 #21	CDK2AP2 (ENSNLEG00000006438) #22	PITPNM1 (ENSNLEG00000026976) #23	AIP (ENSNLEG00000006435) #24	TMEM134 (ENSNLEG00000006430) #25	CABP4 (ENSNLEG00000006425) #26	GPR152 (ENSNLEG00000018914) #27	CORO1B (ENSNLEG00000006399) #28	PTPRCAP (ENSNLEG00000006397) #29	RPS6KB2 (ENSNLEG00000006392) #30	CARNS1 (ENSNLEG00000006317) #31	TBC1D10C (ENSNLEG00000006381) #32	PPP1CA (ENSNLEG00000006360) #33	RAD9A (ENSNLEG00000006355) #34	ENSNLEG00000006348 #35	ENSNLEG00000029224	SSH3 (ENSNLEG00000006321) #37
Gibbon	MODERN SPECIES	1	DLX6 (ENSNLEG00000016008)	ENSNLEG00000016010	SDHAF3 (ENSNLEG00000016014)	TAC1 (ENSNLEG00000016015)	ASNS (ENSNLEG00000016044)	ENSNLEG00000033587	C1GALT1 (ENSNLEG00000016087)	COL28A1 (ENSNLEG00000016093)	MIOS (ENSNLEG00000016134)	RPA3 (ENSNLEG00000033298)	UMAD1 (ENSNLEG00000016155)	ENSNLEG00000035067	ENSNLEG00000016158	ICA1 (ENSNLEG00000016162)	NXPH1 (ENSNLEG00000016182)	ENSNLEG00000032207 #22	ENSNLEG00000033241	PHF14 (ENSNLEG00000016184)	THSD7A (ENSNLEG00000016197)	TMEM106B (ENSNLEG00000016225)	VWDE (ENSNLEG00000016235)	ENSNLEG00000028754	ENSNLEG00000035206	SCIN (ENSNLEG00000016265)	ARL4A (ENSNLEG00000016295)	ETV1 (ENSNLEG00000016296)	DGKB (ENSNLEG00000016331)	AGMO (ENSNLEG00000016359)	MEOX2 (ENSNLEG00000016373)	CRPPA (ENSNLEG00000016377)	ENSNLEG00000031958
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT01100000264273	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00390000010641 #16	ENSGT00940000163435	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Eulipotyphla	ANCESTRAL SPECIES	1788																ENSGT00940000160334 #22	ENSGT00940000161522 #23
Hedgehog	MODERN SPECIES	1297																CDK2AP2 (ENSEEUG00000004767) #22	ENSEEUG00000004654 #23
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Felidae	ANCESTRAL SPECIES		ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Panthera	ANCESTRAL SPECIES	18	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Tiger	MODERN SPECIES	492															CABP2 (ENSPTIG00000017163) #21	CDK2AP2 (ENSPTIG00000016923) #22	PITPNM1 (ENSPTIG00000014649) #23	AIP (ENSPTIG00000014436) #24	ENSPTIG00000013619 #25	CABP4 (ENSPTIG00000012944) #26	ENSPTIG00000012585	ENSPTIG00000011991 #28	RPS6KB2 (ENSPTIG00000011233) #30	CARNS1 (ENSPTIG00000011037) #31	TBC1D10C (ENSPTIG00000010601) #32	PPP1CA (ENSPTIG00000009825) #33	RAD9A (ENSPTIG00000008690) #34	CLCF1 (ENSPTIG00000008383) #35	POLD4 (ENSPTIG00000007757) #36	SSH3 (ENSPTIG00000007418) #37
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
lion	MODERN SPECIES	10				CHKA (ENSPLOG00000011481)	TCIRG1 (ENSPLOG00000011364)	NDUFS8 (ENSPLOG00000011271) #7	ENSPLOG00000011172 ##11	UNC93B1 (ENSPLOG00000011063) #9	ALDH3B2 (ENSPLOG00000013293) #11	TBX10 (ENSPLOG00000013092)	ENSPLOG00000013043 #14	ENSPLOG00000012919 #15	NDUFV1 (ENSPLOG00000012672) #16	ENSPLOG00000012523	CABP2 (ENSPLOG00000012338) #21	CDK2AP2 (ENSPLOG00000012271) #22	PITPNM1 (ENSPLOG00000012168) #23	AIP (ENSPLOG00000012104) #24	ENSPLOG00000011943	CABP4 (ENSPLOG00000011804) #26	GPR152 (ENSPLOG00000011768) #27	CORO1B (ENSPLOG00000011738) #28	PTPRCAP (ENSPLOG00000011683) #29	RPS6KB2 (ENSPLOG00000011644) #30	CARNS1 (ENSPLOG00000011427) #31	TBC1D10C (ENSPLOG00000011370) #32	PPP1CA (ENSPLOG00000011253) #33	RAD9A (ENSPLOG00000011138) #34	CLCF1 (ENSPLOG00000011060) #35	POLD4 (ENSPLOG00000010990) #36	SSH3 (ENSPLOG00000010812) #37
leopard	MODERN SPECIES	64	KMT5B (ENSPPRG00000002092)	CHKA (ENSPPRG00000003923)	ENSPPRG00000004626	ENSPPRG00000004705	NDUFS8 (ENSPPRG00000004781) #7	ENSPPRG00000005565 ##11	UNC93B1 (ENSPPRG00000006045) #9	ALDH3B2 (ENSPPRG00000006205) #11	TBX10 (ENSPPRG00000006221)	ENSPPRG00000006340 #14	ENSPPRG00000006725 #15	NDUFV1 (ENSPPRG00000006947) #16	ENSPPRG00000006958	ENSPPRG00000007615 #20	CABP2 (ENSPPRG00000007774) #21	CDK2AP2 (ENSPPRG00000007878) #22	PITPNM1 (ENSPPRG00000008543) #23	AIP (ENSPPRG00000008664) #24	TMEM134 (ENSPPRG00000008976) #25	CABP4 (ENSPPRG00000009084) #26	GPR152 (ENSPPRG00000009357) #27	CORO1B (ENSPPRG00000009537) #28	PTPRCAP (ENSPPRG00000010851) #29	RPS6KB2 (ENSPPRG00000011013) #30	CARNS1 (ENSPPRG00000011289) #31	TBC1D10C (ENSPPRG00000011477) #32	PPP1CA (ENSPPRG00000011753) #33	RAD9A (ENSPPRG00000011858) #34	CLCF1 (ENSPPRG00000012005) #35	POLD4 (ENSPPRG00000012466) #36	SSH3 (ENSPPRG00000013107) #37
Cat	MODERN SPECIES	241	PPP6R3 (ENSFCAG00000005076)	LRP5 (ENSFCAG00000012666)	ENSFCAG00000042941	KMT5B (ENSFCAG00000009067)	CHKA (ENSFCAG00000006219)	TCIRG1 (ENSFCAG00000002995)	NDUFS8 (ENSFCAG00000002988) #7	ENSFCAG00000026709 ##11	UNC93B1 (ENSFCAG00000002986) #9	ENSFCAG00000044091 #11	TBX10 (ENSFCAG00000001760)	ENSFCAG00000022755 #15	NDUFV1 (ENSFCAG00000001757) #16	GSTP1 (ENSFCAG00000001755)	CABP2 (ENSFCAG00000001754) #21	CDK2AP2 (ENSFCAG00000042271) #22	PITPNM1 (ENSFCAG00000001751) #23	ENSFCAG00000052433	CABP4 (ENSFCAG00000003398) #26	AIP (ENSFCAG00000001749) #24	TMEM134 (ENSFCAG00000031246) #27	CORO1B (ENSFCAG00000003396) #28	PTPRCAP (ENSFCAG00000045093) #29	RPS6KB2 (ENSFCAG00000003395) #30	CARNS1 (ENSFCAG00000003394) #31	PPP1CA (ENSFCAG00000028502) #33	RAD9A (ENSFCAG00000003391) #34	CLCF1 (ENSFCAG00000030466) #35	POLD4 (ENSFCAG00000026317) #36	SSH3 (ENSFCAG00000003389) #37	ANKRD13D (ENSFCAG00000003388)
Caniformia	ANCESTRAL SPECIES	21	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125.b #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00940000167974.a	ENSGT00950000185478	ENSGT00940000161468.b #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36
Ursus	ANCESTRAL SPECIES	21	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000163374 #13	ENSGT00940000163889	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125.b.b.b #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00940000167974.a	ENSGT00390000011766 #25	ENSGT00940000161468.b #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
American black bear	MODERN SPECIES	686														ENSUAMG00000005646 #20	CABP2 (ENSUAMG00000005653) #21	CDK2AP2 (ENSUAMG00000005659) #22	PITPNM1 (ENSUAMG00000005674) #23	AIP (ENSUAMG00000005812) #24	ENSUAMG00000005815	TMEM134 (ENSUAMG00000005817) #25	CABP4 (ENSUAMG00000005819) #26	GPR152 (ENSUAMG00000005821) #27	CORO1B (ENSUAMG00000005827) #28	RPS6KB2 (ENSUAMG00000005838) #30	CARNS1 (ENSUAMG00000005842) #31	TBC1D10C (ENSUAMG00000005844) #32	ENSUAMG00000005846 #33	ENSUAMG00000005849 #34	CLCF1 (ENSUAMG00000005852) #35	ENSUAMG00000005854 #36	SSH3 (ENSUAMG00000005856) #37
Polar bear	MODERN SPECIES	328	ENSUMAG00000013275	KMT5B (ENSUMAG00000013196)	CHKA (ENSUMAG00000013148)	ENSUMAG00000013132	NDUFS8 (ENSUMAG00000013128) #7	ENSUMAG00000013125 #8	UNC93B1 (ENSUMAG00000013118) #9	ENSUMAG00000013104 #11	ENSUMAG00000013092 #13	NUDT8 (ENSUMAG00000013078)	ENSUMAG00000013065 #15	NDUFV1 (ENSUMAG00000013061) #16	ENSUMAG00000013053	ENSUMAG00000013046 #20	CABP2 (ENSUMAG00000013041) #21	CDK2AP2 (ENSUMAG00000013035) #22	PITPNM1 (ENSUMAG00000012967) #23	AIP (ENSUMAG00000012949) #24	ENSUMAG00000012948	CABP4 (ENSUMAG00000012943) #26	CORO1B (ENSUMAG00000012896) #28	RPS6KB2 (ENSUMAG00000012544) #30	TBC1D10C (ENSUMAG00000012480) #32	PPP1CA (ENSUMAG00000012448) #33	RAD9A (ENSUMAG00000012428) #34	CLCF1 (ENSUMAG00000012426) #35	POLD4 (ENSUMAG00000012424) #36	SSH3 (ENSUMAG00000012376) #37	ANKRD13D (ENSUMAG00000012336)	GRK2 (ENSUMAG00000011985)	KDM2A (ENSUMAG00000011947)
Giant Panda	MODERN SPECIES	7	ENSAMEG00000030515	KMT5B (ENSAMEG00000001298)	CHKA (ENSAMEG00000001272)	TCIRG1 (ENSAMEG00000001230)	NDUFS8 (ENSAMEG00000001217) #7	ALDH3B1 (ENSAMEG00000001158) #8	UNC93B1 (ENSAMEG00000001141) #9	ENSAMEG00000031445	ALDH3B2 (ENSAMEG00000029412) #11	TBX10 (ENSAMEG00000001098)	ENSAMEG00000027070 #14	ENSAMEG00000001078 #15	NDUFV1 (ENSAMEG00000001049) #16	ENSAMEG00000001020	CABP2 (ENSAMEG00000001006) #21	CDK2AP2 (ENSAMEG00000001002) #22	PITPNM1 (ENSAMEG00000000948) #23	AIP (ENSAMEG00000000937) #24	ENSAMEG00000028957	ENSAMEG00000026647	CABP4 (ENSAMEG00000000919) #26	GPR152 (ENSAMEG00000000918) #27	CORO1B (ENSAMEG00000000857) #28	PTPRCAP (ENSAMEG00000000855) #29	RPS6KB2 (ENSAMEG00000000822) #30	ENSAMEG00000000816	TBC1D10C (ENSAMEG00000000778) #32	PPP1CA (ENSAMEG00000000758) #33	CLCF1 (ENSAMEG00000000739) #35	POLD4 (ENSAMEG00000000732) #36	RAD9A (ENSAMEG00000000743) #34
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
American mink	MODERN SPECIES	104	ENSNVIG00000012636	ENSNVIG00000012648	ENSNVIG00000012658	NDUFS8 (ENSNVIG00000012663) #7	ENSNVIG00000012672 #8	UNC93B1 (ENSNVIG00000012714) #9	ENSNVIG00000012729	ALDH3B2 (ENSNVIG00000012740) #11	TBX10 (ENSNVIG00000012771)	ENSNVIG00000012787 #15	ENSNVIG00000012818 #14	NDUFV1 (ENSNVIG00000012828) #16	ENSNVIG00000012875	ENSNVIG00000012900 #20	CABP2 (ENSNVIG00000012930) #21	CDK2AP2 (ENSNVIG00000012971) #22	PITPNM1 (ENSNVIG00000012984) #23	AIP (ENSNVIG00000013080) #24	TMEM134 (ENSNVIG00000013113) #25	CABP4 (ENSNVIG00000013152) #26	GPR152 (ENSNVIG00000013164) #27	CORO1B (ENSNVIG00000013189) #28	PTPRCAP (ENSNVIG00000013201) #29	RPS6KB2 (ENSNVIG00000013220) #30	CARNS1 (ENSNVIG00000013255) #31	TBC1D10C (ENSNVIG00000013336) #32	ENSNVIG00000013346 #33	RAD9A (ENSNVIG00000013356) #34	CLCF1 (ENSNVIG00000013368) #35	POLD4 (ENSNVIG00000013376) #36	SSH3 (ENSNVIG00000013393) #37
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.e.b #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a.b.a.b	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Red fox	MODERN SPECIES	49	CUNH11orf24 (ENSVVUG00000010101)	KMT5B (ENSVVUG00000010104)	ENSVVUG00000010120	CHKA (ENSVVUG00000010123)	TCIRG1 (ENSVVUG00000010160)	ENSVVUG00000010174 #7	ENSVVUG00000010184 ##11	UNC93B1 (ENSVVUG00000010187) #9	ENSVVUG00000010192 #13	NUDT8 (ENSVVUG00000010211)	ENSVVUG00000010218 #15	NDUFV1 (ENSVVUG00000010224) #16	ENSVVUG00000010240	ENSVVUG00000010271 #20	CABP2 (ENSVVUG00000010286) #21	CDK2AP2 (ENSVVUG00000010306) #22	PITPNM1 (ENSVVUG00000010318) #23	AIP (ENSVVUG00000010343) #24	TMEM134 (ENSVVUG00000010350) #25	CABP4 (ENSVVUG00000010355) #26	GPR152 (ENSVVUG00000010367) #27	CORO1B (ENSVVUG00000010374) #28	PTPRCAP (ENSVVUG00000010384) #29	RPS6KB2 (ENSVVUG00000010392) #30	CARNS1 (ENSVVUG00000010408) #31	TBC1D10C (ENSVVUG00000010411) #32	PPP1CA (ENSVVUG00000010423) #33	RAD9A (ENSVVUG00000010426) #34	CLCF1 (ENSVVUG00000010439) #35	POLD4 (ENSVVUG00000010444) #36	SSH3 (ENSVVUG00000010455) #37
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.e.b #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a.b.a.b	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Dingo	MODERN SPECIES	36	ENSCAFG00020002089	KMT5B (ENSCAFG00020001997)	CHKA (ENSCAFG00020001949)	TCIRG1 (ENSCAFG00020001934)	ENSCAFG00020001910 #7	ENSCAFG00020001904 ##11	UNC93B1 (ENSCAFG00020001896) #9	ALDH3B2 (ENSCAFG00020001840) #11	TBX10 (ENSCAFG00020001823)	NUDT8 (ENSCAFG00020001816)	ENSCAFG00020001779 #15	ENSCAFG00020001698 #16	ENSCAFG00020001675	ENSCAFG00020001669 #20	CABP2 (ENSCAFG00020001633) #21	CDK2AP2 (ENSCAFG00020001620) #22	PITPNM1 (ENSCAFG00020001608) #23	AIP (ENSCAFG00020001604) #24	ENSCAFG00020001594	CABP4 (ENSCAFG00020001570) #26	GPR152 (ENSCAFG00020001563) #27	CORO1B (ENSCAFG00020001558) #28	PTPRCAP (ENSCAFG00020001549) #29	RPS6KB2 (ENSCAFG00020001528) #30	CARNS1 (ENSCAFG00020001494) #31	TBC1D10C (ENSCAFG00020001477) #32	PPP1CA (ENSCAFG00020001475) #33	RAD9A (ENSCAFG00020001462) #34	CLCF1 (ENSCAFG00020001441) #35	POLD4 (ENSCAFG00020001435) #36	SSH3 (ENSCAFG00020001411) #37
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000162460 #19	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Microbat	MODERN SPECIES	1351	PPP6R3 (ENSMLUG00000013121)	LRP5 (ENSMLUG00000001206)	KMT5B (ENSMLUG00000008196)	CHKA (ENSMLUG00000017614)	TCIRG1 (ENSMLUG00000017612)	NDUFS8 (ENSMLUG00000017611) #7	ALDH3B1 (ENSMLUG00000029407) #8	UNC93B1 (ENSMLUG00000017610) #9	ALDH3B2 (ENSMLUG00000028367) #11	ENSMLUG00000011588 #12	TBX10 (ENSMLUG00000011576)	ENSMLUG00000026150 #15	NDUFV1 (ENSMLUG00000011539) #16	GSTP1 (ENSMLUG00000011529) #19	CABP2 (ENSMLUG00000011504) #21	CDK2AP2 (ENSMLUG00000011488) #22	PITPNM1 (ENSMLUG00000011222) #23	AIP (ENSMLUG00000011271) #24	TMEM134 (ENSMLUG00000005143) #25	CABP4 (ENSMLUG00000005139) #26	GPR152 (ENSMLUG00000022557) #27	CORO1B (ENSMLUG00000025612) #28	PTPRCAP (ENSMLUG00000029066) #29	ENSMLUG00000005128 #30	ENSMLUG00000005122	TBC1D10C (ENSMLUG00000005115) #32	PPP1CA (ENSMLUG00000005112) #33	RAD9A (ENSMLUG00000005102) #34	CLCF1 (ENSMLUG00000008928) #35	POLD4 (ENSMLUG00000005095) #36	SSH3 (ENSMLUG00000012082) #37
Greater horseshoe bat	MODERN SPECIES	2	KMT5B (ENSRFEG00010021206)	CHKA (ENSRFEG00010021236)	TCIRG1 (ENSRFEG00010021289)	NDUFS8 (ENSRFEG00010021301) #7	ENSRFEG00010021317 #11	UNC93B1 (ENSRFEG00010021346) #9	ENSRFEG00010021357 #11	ACY3 (ENSRFEG00010021361) #12	TBX10 (ENSRFEG00010021376)	ENSRFEG00010021387 #14	ENSRFEG00010021394 #15	NDUFV1 (ENSRFEG00010021407) #16	ENSRFEG00010021433 #19	ENSRFEG00010021451	CABP2 (ENSRFEG00010021473) #21	CDK2AP2 (ENSRFEG00010021494) #22	PITPNM1 (ENSRFEG00010021507) #23	AIP (ENSRFEG00010021536) #24	TMEM134 (ENSRFEG00010021554) #25	CABP4 (ENSRFEG00010021584) #26	GPR152 (ENSRFEG00010021609) #27	CORO1B (ENSRFEG00010021624) #28	PTPRCAP (ENSRFEG00010021642) #29	RPS6KB2 (ENSRFEG00010021650) #30	CARNS1 (ENSRFEG00010021672) #31	TBC1D10C (ENSRFEG00010000562) #32	PPP1CA (ENSRFEG00010000614) #33	RAD9A (ENSRFEG00010000657) #34	CLCF1 (ENSRFEG00010000699) #35	POLD4 (ENSRFEG00010000741) #36	SSH3 (ENSRFEG00010000770) #37
Megabat	MODERN SPECIES	2353										ACY3 (ENSPVAG00000008593) #12	ENSPVAG00000008592 #13	ENSPVAG00000008591 #14	NDUFV1 (ENSPVAG00000008590) #16	ENSPVAG00000008586	CABP2 (ENSPVAG00000008584) #21	CDK2AP2 (ENSPVAG00000008582) #22	PITPNM1 (ENSPVAG00000008581) #23	AIP (ENSPVAG00000008580) #24	TMEM134 (ENSPVAG00000008578) #25	CABP4 (ENSPVAG00000008576) #26	CORO1B (ENSPVAG00000008571) #28	RPS6KB2 (ENSPVAG00000008565) #30	ENSPVAG00000008564 #31	TBC1D10C (ENSPVAG00000008561) #32	PPP1CA (ENSPVAG00000008557) #33	RAD9A (ENSPVAG00000008553) #34	CLCF1 (ENSPVAG00000008552) #35	POLD4 (ENSPVAG00000008550) #36	SSH3 (ENSPVAG00000008548) #37	ANKRD13D (ENSPVAG00000008545)	GRK2 (ENSPVAG00000008543)
Equus	ANCESTRAL SPECIES	11	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.b	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Horse	MODERN SPECIES	3	LRP5 (ENSECAG00000013180)	C12H11orf24 (ENSECAG00000028930)	KMT5B (ENSECAG00000012952)	CHKA (ENSECAG00000011539)	TCIRG1 (ENSECAG00000010196)	NDUFS8 (ENSECAG00000010175) #7	ALDH3B1 (ENSECAG00000007907) ##11	UNC93B1 (ENSECAG00000007813) #9	ALDH3B2 (ENSECAG00000000896) #11	TBX10 (ENSECAG00000022406)	DOC2G (ENSECAG00000022087) #15	ENSECAG00000054975	NDUFV1 (ENSECAG00000021477) #16	ENSECAG00000020462	CABP2 (ENSECAG00000020097) #21	CDK2AP2 (ENSECAG00000020079) #22	PITPNM1 (ENSECAG00000017776) #23	AIP (ENSECAG00000017167) #24	TMEM134 (ENSECAG00000016857) #25	CABP4 (ENSECAG00000016408) #26	GPR152 (ENSECAG00000016385) #27	CORO1B (ENSECAG00000014882) #28	PTPRCAP (ENSECAG00000014875) #29	RPS6KB2 (ENSECAG00000012221) #30	CARNS1 (ENSECAG00000012116) #31	PPP1CA (ENSECAG00000010532) #33	TBC1D10C (ENSECAG00000012029) #32	RAD9A (ENSECAG00000010129) #34	CLCF1 (ENSECAG00000010091) #35	ENSECAG00000010008 #36	SSH3 (ENSECAG00000009653) #37
Donkey	MODERN SPECIES	21	CHKA (ENSEASG00005006007)	TCIRG1 (ENSEASG00005006001)	NDUFS8 (ENSEASG00005005999) #7	ENSEASG00005005998 ##11	UNC93B1 (ENSEASG00005005996) #9	ENSEASG00005034466	ALDH3B2 (ENSEASG00005005982) #11	TBX10 (ENSEASG00005005973)	ENSEASG00005005969 #14	ENSEASG00005005966 #15	NDUFV1 (ENSEASG00005005962) #16	ENSEASG00005026638	ENSEASG00005005960	ENSEASG00005005953 #20	CABP2 (ENSEASG00005005950) #21	CDK2AP2 (ENSEASG00005005947) #22	PITPNM1 (ENSEASG00005005939) #23	AIP (ENSEASG00005005936) #24	TMEM134 (ENSEASG00005035157) #25	CABP4 (ENSEASG00005005930) #26	GPR152 (ENSEASG00005005928) #27	CORO1B (ENSEASG00005005926) #28	PTPRCAP (ENSEASG00005005924) #29	RPS6KB2 (ENSEASG00005005920) #30	CARNS1 (ENSEASG00005005916) #31	TBC1D10C (ENSEASG00005005914) #32	PPP1CA (ENSEASG00005005876) #33	ENSEASG00005005863 #34	CLCF1 (ENSEASG00005030157) #35	ENSEASG00005028320 #36	SSH3 (ENSEASG00005005855) #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Suina	ANCESTRAL SPECIES	14	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Pig	MODERN SPECIES	10	ENSSSCG00000012886	KMT5B (ENSSSCG00000031459)	CHKA (ENSSSCG00000012889)	TCIRG1 (ENSSSCG00000012890)	NDUFS8 (ENSSSCG00000037455) #7	ENSSSCG00000028501 ##11	UNC93B1 (ENSSSCG00000012893) #9	ALDH3B2 (ENSSSCG00000026349) #11	TBX10 (ENSSSCG00000034410)	ENSSSCG00000035645 #14	ENSSSCG00000052603 #15	NDUFV1 (ENSSSCG00000012896) #16	ENSSSCG00000032003	ENSSSCG00000060071 #20	CABP2 (ENSSSCG00000020764) #21	CDK2AP2 (ENSSSCG00000012902) #22	PITPNM1 (ENSSSCG00000012903) #23	AIP (ENSSSCG00000062981) #24	TMEM134 (ENSSSCG00000012905) #25	CABP4 (ENSSSCG00000012906) #26	GPR152 (ENSSSCG00000059139) #27	CORO1B (ENSSSCG00000012920) #28	PTPRCAP (ENSSSCG00000012909) #29	RPS6KB2 (ENSSSCG00000012910) #30	CARNS1 (ENSSSCG00000012911) #31	TBC1D10C (ENSSSCG00000012912) #32	PPP1CA (ENSSSCG00000012913) #33	RAD9A (ENSSSCG00000012914) #34	CLCF1 (ENSSSCG00000012915) #35	POLD4 (ENSSSCG00000012916) #36	SSH3 (ENSSSCG00000027956) #37
Chacoan peccary	MODERN SPECIES	921	ENSCWAG00000006195	KMT5B (ENSCWAG00000006216)	CHKA (ENSCWAG00000006285)	TCIRG1 (ENSCWAG00000006382)	NDUFS8 (ENSCWAG00000006464) #7	ENSCWAG00000006537 ##11	UNC93B1 (ENSCWAG00000006584) #9	ALDH3B2 (ENSCWAG00000006631) #11	TBX10 (ENSCWAG00000006811)	ENSCWAG00000006858 #14	ENSCWAG00000006879 #15	NDUFV1 (ENSCWAG00000006939) #16	ENSCWAG00000007036	ENSCWAG00000007049 #20	CABP2 (ENSCWAG00000007074) #21	CDK2AP2 (ENSCWAG00000007150) #22	PITPNM1 (ENSCWAG00000007166) #23	AIP (ENSCWAG00000007192) #24	TMEM134 (ENSCWAG00000007220) #25	CABP4 (ENSCWAG00000007263) #26	GPR152 (ENSCWAG00000007292) #27	CORO1B (ENSCWAG00000007304) #28	PTPRCAP (ENSCWAG00000007330) #29	RPS6KB2 (ENSCWAG00000007341) #30	CARNS1 (ENSCWAG00000007375) #31	TBC1D10C (ENSCWAG00000007510) #32	ENSCWAG00000007570 #33	RAD9A (ENSCWAG00000007635) #34	CLCF1 (ENSCWAG00000007645) #35	POLD4 (ENSCWAG00000007670) #36	ENSCWAG00000007703 #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Camelidae	ANCESTRAL SPECIES	18	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000163374.g #13	ENSGT00940000163889	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.e.a	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37	ENSGT00950000182928.A.a.b
Alpaca	MODERN SPECIES	1782																CDK2AP2 (ENSVPAG00000004070) #22
Arabian camel	MODERN SPECIES	1	KMT5B (ENSCDRG00005008575)	CHKA (ENSCDRG00005008677)	TCIRG1 (ENSCDRG00005009035)	NDUFS8 (ENSCDRG00005009196) #7	ALDH3B1 (ENSCDRG00005009325) #8	UNC93B1 (ENSCDRG00005009668) #9	ENSCDRG00005009764	ALDH3B2 (ENSCDRG00005009823) #11	ENSCDRG00005009949 #13	NUDT8 (ENSCDRG00005009988)	ENSCDRG00005010025 #15	NDUFV1 (ENSCDRG00005010077) #16	GSTP1-1 (ENSCDRG00005010333)	ENSCDRG00005010431 #20	CABP2 (ENSCDRG00005010465) #21	CDK2AP2 (ENSCDRG00005010661) #22	PITPNM1 (ENSCDRG00005010686) #23	AIP (ENSCDRG00005010788) #24	ENSCDRG00005010854 #25	CABP4 (ENSCDRG00005011171) #26	GPR152 (ENSCDRG00005011272) #27	CORO1B (ENSCDRG00005011291) #28	RPS6KB2 (ENSCDRG00005011373) #30	CARNS1 (ENSCDRG00005011445) #31	TBC1D10C (ENSCDRG00005011591) #32	PPP1CA (ENSCDRG00005011737) #33	RAD9A (ENSCDRG00005011885) #34	CLCF1 (ENSCDRG00005011923) #35	POLD4 (ENSCDRG00005011964) #36	SSH3 (ENSCDRG00005012079) #37	ANKRD13D (ENSCDRG00005012263)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Blue whale	MODERN SPECIES		ENSBMSG00010000549	B3GALT2 (ENSBMSG00010000463)	CDC73 (ENSBMSG00010000363)	GLRX2 (ENSBMSG00010000297)	RO60 (ENSBMSG00010000248)	ENSBMSG00010000189	ENSBMSG00010000156	RGS2 (ENSBMSG00010000121)	RGS13 (ENSBMSG00010000086)	RGS1 (ENSBMSG00010000063)	RGS21 (ENSBMSG00010000034)	RGS18 (ENSBMSG00010000021)	ENSBMSG00010004812	ENSBMSG00010004804	BRINP3 (ENSBMSG00010004798)	ENSBMSG00010004791 #22	ENSBMSG00010004763	ENSBMSG00010004741	KCTD3 (ENSBMSG00010004710)	USH2A (ENSBMSG00010004301)	ESRRG (ENSBMSG00010004215)	GPATCH2 (ENSBMSG00010004185)	SPATA17 (ENSBMSG00010004163)	RRP15 (ENSBMSG00010004149)	TGFB2 (ENSBMSG00010004097)	LYPLAL1 (ENSBMSG00010004063)	SLC30A10 (ENSBMSG00010004048)	EPRS1 (ENSBMSG00010004027)	BPNT1 (ENSBMSG00010003971)	IARS2 (ENSBMSG00010003944)	RAB3GAP2 (ENSBMSG00010003907)
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Sperm whale	MODERN SPECIES	97														ENSPCTG00005022609 #20	CABP2 (ENSPCTG00005022608) #21	CDK2AP2 (ENSPCTG00005022607) #22	PITPNM1 (ENSPCTG00005022605) #23	AIP (ENSPCTG00005022604) #24	TMEM134 (ENSPCTG00005022602) #25	CABP4 (ENSPCTG00005022601) #26	GPR152 (ENSPCTG00005022600) #27	CORO1B (ENSPCTG00005022599) #28	PTPRCAP (ENSPCTG00005022598) #29	RPS6KB2 (ENSPCTG00005022597) #30	CARNS1 (ENSPCTG00005022594) #31	TBC1D10C (ENSPCTG00005022589) #32	PPP1CA (ENSPCTG00005022585) #33	RAD9A (ENSPCTG00005022584) #34
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00390000001189.b #12	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Dolphin	MODERN SPECIES	1942															CABP2 (ENSTTRG00000013269) #21	CDK2AP2 (ENSTTRG00000013268) #22	PITPNM1 (ENSTTRG00000013267) #23	AIP (ENSTTRG00000013265) #24	TMEM134 (ENSTTRG00000013264) #25	CABP4 (ENSTTRG00000013261) #26	GPR152 (ENSTTRG00000013260) #27	CORO1B (ENSTTRG00000013257) #28	PTPRCAP (ENSTTRG00000013255) #29	RPS6KB2 (ENSTTRG00000013251) #30	ENSTTRG00000013249 #31	TBC1D10C (ENSTTRG00000013242) #32	PPP1CA (ENSTTRG00000013233) #33	RAD9A (ENSTTRG00000013208) #34
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000153377.B	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Vaquita	MODERN SPECIES	19	LRP5 (ENSPSNG00000013733)	ENSPSNG00000013665	KMT5B (ENSPSNG00000013500)	CHKA (ENSPSNG00000013362)	TCIRG1 (ENSPSNG00000013176)	NDUFS8 (ENSPSNG00000013024) #7	ENSPSNG00000012832 ##11	UNC93B1 (ENSPSNG00000012748) #9	ALDH3B2 (ENSPSNG00000012373) #11	TBX10 (ENSPSNG00000012218)	ENSPSNG00000012192 #14	NDUFV1 (ENSPSNG00000012099) #16	ENSPSNG00000012038	ENSPSNG00000011890 #20	CABP2 (ENSPSNG00000011691) #21	CDK2AP2 (ENSPSNG00000011634) #22	PITPNM1 (ENSPSNG00000011535) #23	AIP (ENSPSNG00000011463) #24	TMEM134 (ENSPSNG00000011362) #25	CABP4 (ENSPSNG00000011189) #26	GPR152 (ENSPSNG00000011149) #27	CORO1B (ENSPSNG00000011096) #28	PTPRCAP (ENSPSNG00000011039) #29	RPS6KB2 (ENSPSNG00000010990) #30	CARNS1 (ENSPSNG00000010738) #31	TBC1D10C (ENSPSNG00000010641) #32	PPP1CA (ENSPSNG00000010502) #33	RAD9A (ENSPSNG00000010444) #34	CLCF1 (ENSPSNG00000010372) #35	POLD4 (ENSPSNG00000010304) #36	SSH3 (ENSPSNG00000010029) #37
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000162915 #8	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Narwhal	MODERN SPECIES	314	ENSMMNG00015020790	KMT5B (ENSMMNG00015020754)	CHKA (ENSMMNG00015020690)	TCIRG1 (ENSMMNG00015020611)	NDUFS8 (ENSMMNG00015020550) #7	ALDH3B1 (ENSMMNG00015020460) #8	UNC93B1 (ENSMMNG00015020395) #9	ALDH3B2 (ENSMMNG00015020368) #11	TBX10 (ENSMMNG00015020328)	ENSMMNG00015020305 #14	ENSMMNG00015020291 #15	NDUFV1 (ENSMMNG00015020258) #16	ENSMMNG00015020229	ENSMMNG00015020200 #20	CABP2 (ENSMMNG00015020136) #21	CDK2AP2 (ENSMMNG00015020090) #22	PITPNM1 (ENSMMNG00015020033) #23	AIP (ENSMMNG00015019982) #24	TMEM134 (ENSMMNG00015019872) #25	CABP4 (ENSMMNG00015019821) #26	GPR152 (ENSMMNG00015019803) #27	CORO1B (ENSMMNG00015019765) #28	PTPRCAP (ENSMMNG00015019739) #29	RPS6KB2 (ENSMMNG00015019710) #30	CARNS1 (ENSMMNG00015019617) #31	TBC1D10C (ENSMMNG00015019565) #32	PPP1CA (ENSMMNG00015019512) #33	RAD9A (ENSMMNG00015019448) #34	CLCF1 (ENSMMNG00015019402) #35	POLD4 (ENSMMNG00015019361) #36	SSH3 (ENSMMNG00015019247) #37
Beluga whale	MODERN SPECIES	7	ENSDLEG00000007238	KMT5B (ENSDLEG00000007251)	CHKA (ENSDLEG00000007265)	TCIRG1 (ENSDLEG00000007283)	NDUFS8 (ENSDLEG00000007301) #7	ENSDLEG00000007316 ##11	UNC93B1 (ENSDLEG00000007327) #9	ENSDLEG00000007341 #11	TBX10 (ENSDLEG00000007345)	ENSDLEG00000007357 #14	ENSDLEG00000007368 #15	NDUFV1 (ENSDLEG00000007370) #16	ENSDLEG00000007379	ENSDLEG00000007392 #20	CABP2 (ENSDLEG00000007398) #21	CDK2AP2 (ENSDLEG00000007407) #22	PITPNM1 (ENSDLEG00000007424) #23	AIP (ENSDLEG00000007462) #24	TMEM134 (ENSDLEG00000007472) #25	CABP4 (ENSDLEG00000007479) #26	GPR152 (ENSDLEG00000007487) #27	CORO1B (ENSDLEG00000007489) #28	RPS6KB2 (ENSDLEG00000007496) #30	PTPRCAP (ENSDLEG00000007502) #29	CARNS1 (ENSDLEG00000007504) #31	TBC1D10C (ENSDLEG00000007507) #32	PPP1CA (ENSDLEG00000000041) #33	RAD9A (ENSDLEG00000000070) #34	CLCF1 (ENSDLEG00000000088) #35	ENSDLEG00000000120 #36	SSH3 (ENSDLEG00000000182) #37
Pecora	ANCESTRAL SPECIES	13	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Yarkand deer	MODERN SPECIES	11	KMT5B (ENSCHYG00000003849)	CHKA (ENSCHYG00000003799)	TCIRG1 (ENSCHYG00000003734)	NDUFS8 (ENSCHYG00000003690) #7	ALDH3B1 (ENSCHYG00000003612) #8	UNC93B1 (ENSCHYG00000003557) #9	ENSCHYG00000003548	ALDH3B2 (ENSCHYG00000003514) #11	TBX10 (ENSCHYG00000003486)	ENSCHYG00000003477 #14	ENSCHYG00000003458 #15	NDUFV1 (ENSCHYG00000003440) #16	ENSCHYG00000003427	ENSCHYG00000003387 #20	CABP2 (ENSCHYG00000003335) #21	CDK2AP2 (ENSCHYG00000003302) #22	PITPNM1 (ENSCHYG00000003166) #23	AIP (ENSCHYG00000003119) #24	TMEM134 (ENSCHYG00000003047) #25	CABP4 (ENSCHYG00000003019) #26	GPR152 (ENSCHYG00000003011) #27	CORO1B (ENSCHYG00000002991) #28	PTPRCAP (ENSCHYG00000002984) #29	RPS6KB2 (ENSCHYG00000002967) #30	CARNS1 (ENSCHYG00000002924) #31	TBC1D10C (ENSCHYG00000002870) #32	PPP1CA (ENSCHYG00000002815) #33	RAD9A (ENSCHYG00000002779) #34	CLCF1 (ENSCHYG00000002752) #35	ENSCHYG00000002737 #36	ENSCHYG00000002718
Percora_a	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Siberian musk deer	MODERN SPECIES	1226	KMT5B (ENSMMSG00000023533)	CHKA (ENSMMSG00000023562)	TCIRG1 (ENSMMSG00000023600)	NDUFS8 (ENSMMSG00000023617) #7	ENSMMSG00000023640 ##11	UNC93B1 (ENSMMSG00000023668) #9	ALDH3B2 (ENSMMSG00000023685) #11	TBX10 (ENSMMSG00000023697)	ENSMMSG00000023700 #14	ENSMMSG00000023706	ENSMMSG00000023708 #15	NDUFV1 (ENSMMSG00000023713) #16	ENSMMSG00000023730	ENSMMSG00000023744 #20	CABP2 (ENSMMSG00000023763) #21	CDK2AP2 (ENSMMSG00000023774) #22	PITPNM1 (ENSMMSG00000023779) #23	AIP (ENSMMSG00000023787) #24	ENSMMSG00000023795 #25	CABP4 (ENSMMSG00000023807) #26	GPR152 (ENSMMSG00000023822) #27	CORO1B (ENSMMSG00000023829) #28	PTPRCAP (ENSMMSG00000023838) #29	RPS6KB2 (ENSMMSG00000023844) #30	CARNS1 (ENSMMSG00000023862) #31	TBC1D10C (ENSMMSG00000023882) #32	PPP1CA (ENSMMSG00000023894) #33	RAD9A (ENSMMSG00000023915) #34	CLCF1 (ENSMMSG00000023932) #35	POLD4 (ENSMMSG00000023941) #36	SSH3 (ENSMMSG00000023947) #37
Bovidae	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Caprinae	ANCESTRAL SPECIES	20	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000163374.g #13	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00990000203796	ENSGT00960000189182	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36
Rambouillet Sheep	MODERN SPECIES	13	CHKA (ENSOARG00020014607)	ENSOARG00020014508	ENSOARG00020014473	NDUFS8 (ENSOARG00020014383) #7	ENSOARG00020014110 ##11	UNC93B1 (ENSOARG00020014035) #9	ENSOARG00020014001	ALDH3B2 (ENSOARG00020013912) #11	TBX10 (ENSOARG00020013801)	NUDT8 (ENSOARG00020013703)	ENSOARG00020013607 #15	NDUFV1 (ENSOARG00020013585) #16	ENSOARG00020013487	ENSOARG00020013368 #20	CABP2 (ENSOARG00020013080) #21	CDK2AP2 (ENSOARG00020013021) #22	PITPNM1 (ENSOARG00020012916) #23	AIP (ENSOARG00020012864) #24	TMEM134 (ENSOARG00020012668) #25	CABP4 (ENSOARG00020012475) #26	GPR152 (ENSOARG00020012440) #27	CORO1B (ENSOARG00020012381) #28	PTPRCAP (ENSOARG00020012324) #29	RPS6KB2 (ENSOARG00020012258) #30	ENSOARG00020011906	TBC1D10C (ENSOARG00020011852) #32	PPP1CA (ENSOARG00020011637) #33	RAD9A (ENSOARG00020011511) #34	CLCF1 (ENSOARG00020011455) #35	POLD4 (ENSOARG00020011352) #36	ENSOARG00020011311 #37
Goat	MODERN SPECIES	21	ENSCHIG00000016165	KMT5B (ENSCHIG00000025585)	CHKA (ENSCHIG00000014786)	TCIRG1 (ENSCHIG00000021975)	ENSCHIG00000013308 #7	ENSCHIG00000026059 ##11	UNC93B1 (ENSCHIG00000026943) #9	ALDH3B2 (ENSCHIG00000016769) #11	ENSCHIG00000026949 #13	ENSCHIG00000019709 #14	ENSCHIG00000020228 #15	NDUFV1 (ENSCHIG00000022888) #16	ENSCHIG00000014133	ENSCHIG00000015669 #20	CABP2 (ENSCHIG00000009106) #21	CDK2AP2 (ENSCHIG00000021025) #22	PITPNM1 (ENSCHIG00000000979) #23	ENSCHIG00000025314 #24	TMEM134 (ENSCHIG00000013846) #25	CABP4 (ENSCHIG00000012267) #26	GPR152 (ENSCHIG00000007197) #27	ENSCHIG00000015350	ENSCHIG00000023617	ENSCHIG00000011158	AP2A2 (ENSCHIG00000025368)	CHID1 (ENSCHIG00000023896)	ENSCHIG00000016060	ENSCHIG00000026593	ENSCHIG00000007736	ENSCHIG00000019798	IFITM5 (ENSCHIG00000022929)
Bovinae	ANCESTRAL SPECIES	24	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
American bison	MODERN SPECIES	3011	LRP5 (ENSBBBG00000007211)	ENSBBBG00000008495	KMT5B (ENSBBBG00000011927)	CHKA (ENSBBBG00000002204)	TCIRG1 (ENSBBBG00000011829)	NDUFS8 (ENSBBBG00000011803) #7	ENSBBBG00000008099 ##11	UNC93B1 (ENSBBBG00000011762) #9	ALDH3B2 (ENSBBBG00000011745) #11	TBX10 (ENSBBBG00000011733)	ENSBBBG00000002170 #14	NDUFV1 (ENSBBBG00000006837) #16	ENSBBBG00000011688	ENSBBBG00000011647 #20	CABP2 (ENSBBBG00000002134) #21	CDK2AP2 (ENSBBBG00000011578) #22	PITPNM1 (ENSBBBG00000011566) #23	AIP (ENSBBBG00000011499) #24	TMEM134 (ENSBBBG00000011488) #25	CABP4 (ENSBBBG00000011461) #26	GPR152 (ENSBBBG00000008097) #27	CORO1B (ENSBBBG00000011439) #28	PTPRCAP (ENSBBBG00000011426) #29	RPS6KB2 (ENSBBBG00000011423) #30	ENSBBBG00000011410	TBC1D10C (ENSBBBG00000002019) #32	PPP1CA (ENSBBBG00000002073) #33	RAD9A (ENSBBBG00000011271) #34	CLCF1 (ENSBBBG00000011254) #35	POLD4 (ENSBBBG00000011249) #36	SSH3 (ENSBBBG00000011241) #37
Bos	ANCESTRAL SPECIES	11	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Bos_a	ANCESTRAL SPECIES	34	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.f ##11	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00960000191071	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162775 #14	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Wild yak	MODERN SPECIES	1533							UNC93B1 (ENSBMUG00000022067) #9	ENSBMUG00000022057	ALDH3B2 (ENSBMUG00000022044) #11	TBX10 (ENSBMUG00000022029)	ENSBMUG00000022014 #14	ENSBMUG00000021996 #15	NDUFV1 (ENSBMUG00000021947) #16	ENSBMUG00000021831	CABP2 (ENSBMUG00000021781) #21	CDK2AP2 (ENSBMUG00000021758) #22	PITPNM1 (ENSBMUG00000021743) #23	AIP (ENSBMUG00000021692) #24	ENSBMUG00000021649 #25	CABP4 (ENSBMUG00000021589) #26	GPR152 (ENSBMUG00000021581) #27	CORO1B (ENSBMUG00000021562) #28	ENSBMUG00000021528 #29	RPS6KB2 (ENSBMUG00000021523) #30	CARNS1 (ENSBMUG00000021512) #31	TBC1D10C (ENSBMUG00000021479) #32	PPP1CA (ENSBMUG00000021462) #33	RAD9A (ENSBMUG00000021453) #34	CLCF1 (ENSBMUG00000021437) #35	POLD4 (ENSBMUG00000021428) #36	SSH3 (ENSBMUG00000021417) #37
Domestic yak	MODERN SPECIES	21	FGF4 (ENSBGRG00000024355)	ENSBGRG00000024377	ENSBGRG00000024404	CCND1 (ENSBGRG00000024441)	ENSBGRG00000008155	ENSBGRG00000008216	ENSBGRG00000008684	ENSBGRG00000008704	ENSBGRG00000012448 ##11	ENSBGRG00000012721 #9	TBX10 (ENSBGRG00000013152)	NDUFV1 (ENSBGRG00000013540) #16	ENSBGRG00000013805	ENSBGRG00000013866 #20	CABP2 (ENSBGRG00000013947) #21	CDK2AP2 (ENSBGRG00000014064) #22	ENSBGRG00000014144 #23	ENSBGRG00000014533	CORO1B (ENSBGRG00000014832) #28	PPP1CA (ENSBGRG00000017991) #33	ENSBGRG00000018373	ENSBGRG00000018673	ENSBGRG00000019717	ENSBGRG00000021808	ENSBGRG00000022112	ENSBGRG00000022387	ENSBGRG00000022563	CCS (ENSBGRG00000022678)	ENSBGRG00000023725	ENSBGRG00000025656	YIF1A (ENSBGRG00000025666)
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049 #7	ENSGT00940000155904.e.a ##11	ENSGT00530000063359.B #9	ENSGT00940000155904.e.b #11	ENSGT00940000154816.a.a	ENSGT00940000162875 #15	ENSGT00390000010641 #16	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031 #28	ENSGT00390000017041 #29	ENSGT00940000155062.a #30	ENSGT00390000018717.a #31	ENSGT00940000161287 #32	ENSGT00940000153472.a.b #33	ENSGT00390000005767.a #34	ENSGT00510000048856.C #35	ENSGT00390000005096 #36	ENSGT00940000160322 #37
Cow	MODERN SPECIES	21	LRP5 (ENSBTAG00000005903)	C29H11orf24 (ENSBTAG00000004392)	KMT5B (ENSBTAG00000001185)	CHKA (ENSBTAG00000010304)	TCIRG1 (ENSBTAG00000000292)	NDUFS8 (ENSBTAG00000012072) #7	ALDH3B1 (ENSBTAG00000013093) ##11	UNC93B1 (ENSBTAG00000001193) #9	ENSBTAG00000012054 #11	TBX10 (ENSBTAG00000011816)	DOC2G (ENSBTAG00000021777) #15	NDUFV1 (ENSBTAG00000021776) #16	GSTP1 (ENSBTAG00000051210)	GSTP1 (ENSBTAG00000003548) #20	CABP2 (ENSBTAG00000022209) #21	CDK2AP2 (ENSBTAG00000002121) #22	PITPNM1 (ENSBTAG00000010482) #23	AIP (ENSBTAG00000010478) #24	TMEM134 (ENSBTAG00000004786) #25	CABP4 (ENSBTAG00000004785) #26	GPR152 (ENSBTAG00000046728) #27	CORO1B (ENSBTAG00000004783) #28	PTPRCAP (ENSBTAG00000004782) #29	RPS6KB2 (ENSBTAG00000009175) #30	CARNS1 (ENSBTAG00000017690) #31	TBC1D10C (ENSBTAG00000013133) #32	PPP1CA (ENSBTAG00000012146) #33	RAD9A (ENSBTAG00000012141) #34	CLCF1 (ENSBTAG00000046110) #35	POLD4 (ENSBTAG00000017951) #36	SSH3 (ENSBTAG00000031590) #37
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005021753	ENSBIXG00005021733	KMT5B (ENSBIXG00005021706)	ENSBIXG00005006157	TCIRG1 (ENSBIXG00005021556)	NDUFS8 (ENSBIXG00005006662) #7	ENSBIXG00005021420 ##11	UNC93B1 (ENSBIXG00005021297) #9	ENSBIXG00005021275 #11	TBX10 (ENSBIXG00005021245)	ENSBIXG00005007675 #15	NDUFV1 (ENSBIXG00005021193) #16	ENSBIXG00005021129	ENSBIXG00005021109	CABP2 (ENSBIXG00005021047) #21	ENSBIXG00005020965 #22	PITPNM1 (ENSBIXG00005003531) #23	AIP (ENSBIXG00005020736) #24	TMEM134 (ENSBIXG00005003498) #25	CABP4 (ENSBIXG00005003484) #26	GPR152 (ENSBIXG00005007302) #27	CORO1B (ENSBIXG00005020573) #28	PTPRCAP (ENSBIXG00005020556) #29	RPS6KB2 (ENSBIXG00005007154) #30	CARNS1 (ENSBIXG00005020507) #31	TBC1D10C (ENSBIXG00005020430) #32	PPP1CA (ENSBIXG00005003445) #33	RAD9A (ENSBIXG00005020343) #34	ENSBIXG00005005868 #35	ENSBIXG00005007206 #36	SSH3 (ENSBIXG00005020249) #37