Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.e.a ##19	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.e.a ##19	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Pecora	ANCESTRAL SPECIES	13	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Percora_a	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Bovidae	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Caprinae	ANCESTRAL SPECIES	20	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000163889	ENSGT00940000163374.g #15	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00990000203796	ENSGT00960000189182	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096
Goat	MODERN SPECIES	21	ENSCHIG00000016165 #7	KMT5B (ENSCHIG00000025585) #8	CHKA (ENSCHIG00000014786) #9	TCIRG1 (ENSCHIG00000021975) #10	ENSCHIG00000013308 #11	ENSCHIG00000026059 #12	UNC93B1 (ENSCHIG00000026943) #13	ALDH3B2 (ENSCHIG00000016769) #14	ENSCHIG00000026949 #15	ENSCHIG00000019709 #16	ENSCHIG00000020228 #17	NDUFV1 (ENSCHIG00000022888) #18	ENSCHIG00000014133 #19	ENSCHIG00000015669 #20	CABP2 (ENSCHIG00000009106) #21	CDK2AP2 (ENSCHIG00000021025) #22	PITPNM1 (ENSCHIG00000000979) #23	ENSCHIG00000025314 #24	TMEM134 (ENSCHIG00000013846) #25	CABP4 (ENSCHIG00000012267) #26	GPR152 (ENSCHIG00000007197) #27	ENSCHIG00000015350 #28	ENSCHIG00000023617 #29	ENSCHIG00000011158 #30	AP2A2 (ENSCHIG00000025368) #31	CHID1 (ENSCHIG00000023896) #32	ENSCHIG00000016060 #33	ENSCHIG00000026593 #34	ENSCHIG00000007736 #35	ENSCHIG00000019798 #36	IFITM5 (ENSCHIG00000022929) #37
Rambouillet Sheep	MODERN SPECIES	13	CHKA (ENSOARG00020014607) #9	ENSOARG00020014508 #10	ENSOARG00020014473 #10	NDUFS8 (ENSOARG00020014383) #11	ENSOARG00020014110 #12	UNC93B1 (ENSOARG00020014035) #13	ENSOARG00020014001	ALDH3B2 (ENSOARG00020013912) #14	TBX10 (ENSOARG00020013801)	NUDT8 (ENSOARG00020013703)	ENSOARG00020013607 #17	NDUFV1 (ENSOARG00020013585) #18	ENSOARG00020013487 #19	ENSOARG00020013368 #20	CABP2 (ENSOARG00020013080) #21	CDK2AP2 (ENSOARG00020013021) #22	PITPNM1 (ENSOARG00020012916) #23	AIP (ENSOARG00020012864) #24	TMEM134 (ENSOARG00020012668) #25	CABP4 (ENSOARG00020012475) #26	GPR152 (ENSOARG00020012440) #27	CORO1B (ENSOARG00020012381)	PTPRCAP (ENSOARG00020012324)	RPS6KB2 (ENSOARG00020012258)	ENSOARG00020011906	TBC1D10C (ENSOARG00020011852)	PPP1CA (ENSOARG00020011637)	RAD9A (ENSOARG00020011511)	CLCF1 (ENSOARG00020011455)	POLD4 (ENSOARG00020011352)	ENSOARG00020011311
Bovinae	ANCESTRAL SPECIES	24	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
American bison	MODERN SPECIES	3011	LRP5 (ENSBBBG00000007211)	ENSBBBG00000008495 #7	KMT5B (ENSBBBG00000011927) #8	CHKA (ENSBBBG00000002204) #9	TCIRG1 (ENSBBBG00000011829) #10	NDUFS8 (ENSBBBG00000011803) #11	ENSBBBG00000008099 #12	UNC93B1 (ENSBBBG00000011762) #13	ALDH3B2 (ENSBBBG00000011745) #14	TBX10 (ENSBBBG00000011733)	ENSBBBG00000002170 #16	NDUFV1 (ENSBBBG00000006837) #18	ENSBBBG00000011688 #19	ENSBBBG00000011647 #20	CABP2 (ENSBBBG00000002134) #21	CDK2AP2 (ENSBBBG00000011578) #22	PITPNM1 (ENSBBBG00000011566) #23	AIP (ENSBBBG00000011499) #24	TMEM134 (ENSBBBG00000011488) #25	CABP4 (ENSBBBG00000011461) #26	GPR152 (ENSBBBG00000008097) #27	CORO1B (ENSBBBG00000011439)	PTPRCAP (ENSBBBG00000011426)	RPS6KB2 (ENSBBBG00000011423)	ENSBBBG00000011410	TBC1D10C (ENSBBBG00000002019)	PPP1CA (ENSBBBG00000002073)	RAD9A (ENSBBBG00000011271)	CLCF1 (ENSBBBG00000011254)	POLD4 (ENSBBBG00000011249)	SSH3 (ENSBBBG00000011241)
Bos	ANCESTRAL SPECIES	11	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Bos_a	ANCESTRAL SPECIES	34	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.f ##12	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Wild yak	MODERN SPECIES	1533							UNC93B1 (ENSBMUG00000022067) #13	ENSBMUG00000022057	ALDH3B2 (ENSBMUG00000022044) #14	TBX10 (ENSBMUG00000022029)	ENSBMUG00000022014 #16	ENSBMUG00000021996 #17	NDUFV1 (ENSBMUG00000021947) #18	ENSBMUG00000021831 #19	CABP2 (ENSBMUG00000021781) #21	CDK2AP2 (ENSBMUG00000021758) #22	PITPNM1 (ENSBMUG00000021743) #23	AIP (ENSBMUG00000021692) #24	ENSBMUG00000021649 #25	CABP4 (ENSBMUG00000021589) #26	GPR152 (ENSBMUG00000021581) #27	CORO1B (ENSBMUG00000021562)	ENSBMUG00000021528	RPS6KB2 (ENSBMUG00000021523)	CARNS1 (ENSBMUG00000021512)	TBC1D10C (ENSBMUG00000021479)	PPP1CA (ENSBMUG00000021462)	RAD9A (ENSBMUG00000021453)	CLCF1 (ENSBMUG00000021437)	POLD4 (ENSBMUG00000021428)	SSH3 (ENSBMUG00000021417)
Domestic yak	MODERN SPECIES	21	FGF4 (ENSBGRG00000024355)	ENSBGRG00000024377	ENSBGRG00000024404	CCND1 (ENSBGRG00000024441)	ENSBGRG00000008155	ENSBGRG00000008216	ENSBGRG00000008684	ENSBGRG00000008704	ENSBGRG00000012448 #12	ENSBGRG00000012721 #13	TBX10 (ENSBGRG00000013152)	NDUFV1 (ENSBGRG00000013540) #18	ENSBGRG00000013805 #19	ENSBGRG00000013866 #20	CABP2 (ENSBGRG00000013947) #21	CDK2AP2 (ENSBGRG00000014064) #22	ENSBGRG00000014144 #23	ENSBGRG00000014533	CORO1B (ENSBGRG00000014832)	PPP1CA (ENSBGRG00000017991)	ENSBGRG00000018373	ENSBGRG00000018673	ENSBGRG00000019717	ENSBGRG00000021808	ENSBGRG00000022112	ENSBGRG00000022387	ENSBGRG00000022563	CCS (ENSBGRG00000022678)	ENSBGRG00000023725	ENSBGRG00000025656	YIF1A (ENSBGRG00000025666)
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000153377.B #7	ENSGT00940000156431 #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT01100000264273	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Cow	MODERN SPECIES	21	LRP5 (ENSBTAG00000005903)	C29H11orf24 (ENSBTAG00000004392) #7	KMT5B (ENSBTAG00000001185) #8	CHKA (ENSBTAG00000010304) #9	TCIRG1 (ENSBTAG00000000292) #10	NDUFS8 (ENSBTAG00000012072) #11	ALDH3B1 (ENSBTAG00000013093) #12	UNC93B1 (ENSBTAG00000001193) #13	ENSBTAG00000012054 #14	TBX10 (ENSBTAG00000011816)	DOC2G (ENSBTAG00000021777) #17	NDUFV1 (ENSBTAG00000021776) #18	GSTP1 (ENSBTAG00000051210) #19	GSTP1 (ENSBTAG00000003548) #20	CABP2 (ENSBTAG00000022209) #21	CDK2AP2 (ENSBTAG00000002121) #22	PITPNM1 (ENSBTAG00000010482) #23	AIP (ENSBTAG00000010478) #24	TMEM134 (ENSBTAG00000004786) #25	CABP4 (ENSBTAG00000004785) #26	GPR152 (ENSBTAG00000046728) #27	CORO1B (ENSBTAG00000004783)	PTPRCAP (ENSBTAG00000004782)	RPS6KB2 (ENSBTAG00000009175)	CARNS1 (ENSBTAG00000017690)	TBC1D10C (ENSBTAG00000013133)	PPP1CA (ENSBTAG00000012146)	RAD9A (ENSBTAG00000012141)	CLCF1 (ENSBTAG00000046110)	POLD4 (ENSBTAG00000017951)	SSH3 (ENSBTAG00000031590)
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005021753	ENSBIXG00005021733 #7	KMT5B (ENSBIXG00005021706) #8	ENSBIXG00005006157 #9	TCIRG1 (ENSBIXG00005021556) #10	NDUFS8 (ENSBIXG00005006662) #11	ENSBIXG00005021420 #12	UNC93B1 (ENSBIXG00005021297) #13	ENSBIXG00005021275 #14	TBX10 (ENSBIXG00005021245)	ENSBIXG00005007675 #17	NDUFV1 (ENSBIXG00005021193) #18	ENSBIXG00005021129	ENSBIXG00005021109 #19	CABP2 (ENSBIXG00005021047) #21	ENSBIXG00005020965 #22	PITPNM1 (ENSBIXG00005003531) #23	AIP (ENSBIXG00005020736) #24	TMEM134 (ENSBIXG00005003498) #25	CABP4 (ENSBIXG00005003484) #26	GPR152 (ENSBIXG00005007302) #27	CORO1B (ENSBIXG00005020573)	PTPRCAP (ENSBIXG00005020556)	RPS6KB2 (ENSBIXG00005007154)	CARNS1 (ENSBIXG00005020507)	TBC1D10C (ENSBIXG00005020430)	PPP1CA (ENSBIXG00005003445)	RAD9A (ENSBIXG00005020343)	ENSBIXG00005005868	ENSBIXG00005007206	SSH3 (ENSBIXG00005020249)
Siberian musk deer	MODERN SPECIES	1226	KMT5B (ENSMMSG00000023533) #8	CHKA (ENSMMSG00000023562) #9	TCIRG1 (ENSMMSG00000023600) #10	NDUFS8 (ENSMMSG00000023617) #11	ENSMMSG00000023640 #12	UNC93B1 (ENSMMSG00000023668) #13	ALDH3B2 (ENSMMSG00000023685) #14	TBX10 (ENSMMSG00000023697)	ENSMMSG00000023700 #16	ENSMMSG00000023706	ENSMMSG00000023708 #17	NDUFV1 (ENSMMSG00000023713) #18	ENSMMSG00000023730 #19	ENSMMSG00000023744 #20	CABP2 (ENSMMSG00000023763) #21	CDK2AP2 (ENSMMSG00000023774) #22	PITPNM1 (ENSMMSG00000023779) #23	AIP (ENSMMSG00000023787) #24	ENSMMSG00000023795 #25	CABP4 (ENSMMSG00000023807) #26	GPR152 (ENSMMSG00000023822) #27	CORO1B (ENSMMSG00000023829)	PTPRCAP (ENSMMSG00000023838)	RPS6KB2 (ENSMMSG00000023844)	CARNS1 (ENSMMSG00000023862)	TBC1D10C (ENSMMSG00000023882)	PPP1CA (ENSMMSG00000023894)	RAD9A (ENSMMSG00000023915)	CLCF1 (ENSMMSG00000023932)	POLD4 (ENSMMSG00000023941)	SSH3 (ENSMMSG00000023947)
Yarkand deer	MODERN SPECIES	11	KMT5B (ENSCHYG00000003849) #8	CHKA (ENSCHYG00000003799) #9	TCIRG1 (ENSCHYG00000003734) #10	NDUFS8 (ENSCHYG00000003690) #11	ALDH3B1 (ENSCHYG00000003612)	UNC93B1 (ENSCHYG00000003557) #13	ENSCHYG00000003548	ALDH3B2 (ENSCHYG00000003514) #14	TBX10 (ENSCHYG00000003486)	ENSCHYG00000003477 #16	ENSCHYG00000003458 #17	NDUFV1 (ENSCHYG00000003440) #18	ENSCHYG00000003427	ENSCHYG00000003387 #20	CABP2 (ENSCHYG00000003335) #21	CDK2AP2 (ENSCHYG00000003302) #22	PITPNM1 (ENSCHYG00000003166) #23	AIP (ENSCHYG00000003119) #24	TMEM134 (ENSCHYG00000003047) #25	CABP4 (ENSCHYG00000003019) #26	GPR152 (ENSCHYG00000003011) #27	CORO1B (ENSCHYG00000002991)	PTPRCAP (ENSCHYG00000002984)	RPS6KB2 (ENSCHYG00000002967)	CARNS1 (ENSCHYG00000002924)	TBC1D10C (ENSCHYG00000002870)	PPP1CA (ENSCHYG00000002815)	RAD9A (ENSCHYG00000002779)	CLCF1 (ENSCHYG00000002752)	ENSCHYG00000002737	ENSCHYG00000002718
Cetacea	ANCESTRAL SPECIES	4	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000162915	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Blue whale	MODERN SPECIES		ENSBMSG00010000549	B3GALT2 (ENSBMSG00010000463)	CDC73 (ENSBMSG00010000363)	GLRX2 (ENSBMSG00010000297)	RO60 (ENSBMSG00010000248)	ENSBMSG00010000189	ENSBMSG00010000156	RGS2 (ENSBMSG00010000121)	RGS13 (ENSBMSG00010000086)	RGS1 (ENSBMSG00010000063)	RGS21 (ENSBMSG00010000034)	RGS18 (ENSBMSG00010000021)	ENSBMSG00010004812	ENSBMSG00010004804	BRINP3 (ENSBMSG00010004798)	ENSBMSG00010004791 #22	ENSBMSG00010004763	ENSBMSG00010004741	KCTD3 (ENSBMSG00010004710)	USH2A (ENSBMSG00010004301)	ESRRG (ENSBMSG00010004215)	GPATCH2 (ENSBMSG00010004185)	SPATA17 (ENSBMSG00010004163)	RRP15 (ENSBMSG00010004149)	TGFB2 (ENSBMSG00010004097)	LYPLAL1 (ENSBMSG00010004063)	SLC30A10 (ENSBMSG00010004048)	EPRS1 (ENSBMSG00010004027)	BPNT1 (ENSBMSG00010003971)	IARS2 (ENSBMSG00010003944)	RAB3GAP2 (ENSBMSG00010003907)
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000156431 #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Sperm whale	MODERN SPECIES	97														ENSPCTG00005022609 #20	CABP2 (ENSPCTG00005022608) #21	CDK2AP2 (ENSPCTG00005022607) #22	PITPNM1 (ENSPCTG00005022605) #23	AIP (ENSPCTG00005022604) #24	TMEM134 (ENSPCTG00005022602) #25	CABP4 (ENSPCTG00005022601) #26	GPR152 (ENSPCTG00005022600) #27	CORO1B (ENSPCTG00005022599)	PTPRCAP (ENSPCTG00005022598)	RPS6KB2 (ENSPCTG00005022597)	CARNS1 (ENSPCTG00005022594)	TBC1D10C (ENSPCTG00005022589)	PPP1CA (ENSPCTG00005022585)	RAD9A (ENSPCTG00005022584)
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000156431.jb #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00390000001189.b	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Dolphin	MODERN SPECIES	1942															CABP2 (ENSTTRG00000013269) #21	CDK2AP2 (ENSTTRG00000013268) #22	PITPNM1 (ENSTTRG00000013267) #23	AIP (ENSTTRG00000013265) #24	TMEM134 (ENSTTRG00000013264) #25	CABP4 (ENSTTRG00000013261) #26	GPR152 (ENSTTRG00000013260) #27	CORO1B (ENSTTRG00000013257)	PTPRCAP (ENSTTRG00000013255)	RPS6KB2 (ENSTTRG00000013251)	ENSTTRG00000013249	TBC1D10C (ENSTTRG00000013242)	PPP1CA (ENSTTRG00000013233)	RAD9A (ENSTTRG00000013208)
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000153377.B #7	ENSGT00940000156431.jb #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Vaquita	MODERN SPECIES	19	LRP5 (ENSPSNG00000013733)	ENSPSNG00000013665 #7	KMT5B (ENSPSNG00000013500) #8	CHKA (ENSPSNG00000013362) #9	TCIRG1 (ENSPSNG00000013176) #10	NDUFS8 (ENSPSNG00000013024) #11	ENSPSNG00000012832 #12	UNC93B1 (ENSPSNG00000012748) #13	ALDH3B2 (ENSPSNG00000012373) #14	TBX10 (ENSPSNG00000012218)	ENSPSNG00000012192 #16	NDUFV1 (ENSPSNG00000012099) #18	ENSPSNG00000012038 #19	ENSPSNG00000011890 #20	CABP2 (ENSPSNG00000011691) #21	CDK2AP2 (ENSPSNG00000011634) #22	PITPNM1 (ENSPSNG00000011535) #23	AIP (ENSPSNG00000011463) #24	TMEM134 (ENSPSNG00000011362) #25	CABP4 (ENSPSNG00000011189) #26	GPR152 (ENSPSNG00000011149) #27	CORO1B (ENSPSNG00000011096)	PTPRCAP (ENSPSNG00000011039)	RPS6KB2 (ENSPSNG00000010990)	CARNS1 (ENSPSNG00000010738)	TBC1D10C (ENSPSNG00000010641)	PPP1CA (ENSPSNG00000010502)	RAD9A (ENSPSNG00000010444)	CLCF1 (ENSPSNG00000010372)	POLD4 (ENSPSNG00000010304)	SSH3 (ENSPSNG00000010029)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000156431.jb #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000162915	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.f #19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Narwhal	MODERN SPECIES	314	ENSMMNG00015020790 #7	KMT5B (ENSMMNG00015020754) #8	CHKA (ENSMMNG00015020690) #9	TCIRG1 (ENSMMNG00015020611) #10	NDUFS8 (ENSMMNG00015020550) #11	ALDH3B1 (ENSMMNG00015020460)	UNC93B1 (ENSMMNG00015020395) #13	ALDH3B2 (ENSMMNG00015020368) #14	TBX10 (ENSMMNG00015020328)	ENSMMNG00015020305 #16	ENSMMNG00015020291 #17	NDUFV1 (ENSMMNG00015020258) #18	ENSMMNG00015020229 #19	ENSMMNG00015020200 #20	CABP2 (ENSMMNG00015020136) #21	CDK2AP2 (ENSMMNG00015020090) #22	PITPNM1 (ENSMMNG00015020033) #23	AIP (ENSMMNG00015019982) #24	TMEM134 (ENSMMNG00015019872) #25	CABP4 (ENSMMNG00015019821) #26	GPR152 (ENSMMNG00015019803) #27	CORO1B (ENSMMNG00015019765)	PTPRCAP (ENSMMNG00015019739)	RPS6KB2 (ENSMMNG00015019710)	CARNS1 (ENSMMNG00015019617)	TBC1D10C (ENSMMNG00015019565)	PPP1CA (ENSMMNG00015019512)	RAD9A (ENSMMNG00015019448)	CLCF1 (ENSMMNG00015019402)	POLD4 (ENSMMNG00015019361)	SSH3 (ENSMMNG00015019247)
Beluga whale	MODERN SPECIES	7	ENSDLEG00000007238 #7	KMT5B (ENSDLEG00000007251) #8	CHKA (ENSDLEG00000007265) #9	TCIRG1 (ENSDLEG00000007283) #10	NDUFS8 (ENSDLEG00000007301) #11	ENSDLEG00000007316 #12	UNC93B1 (ENSDLEG00000007327) #13	ENSDLEG00000007341 #14	TBX10 (ENSDLEG00000007345)	ENSDLEG00000007357 #16	ENSDLEG00000007368 #17	NDUFV1 (ENSDLEG00000007370) #18	ENSDLEG00000007379 #19	ENSDLEG00000007392 #20	CABP2 (ENSDLEG00000007398) #21	CDK2AP2 (ENSDLEG00000007407) #22	PITPNM1 (ENSDLEG00000007424) #23	AIP (ENSDLEG00000007462) #24	TMEM134 (ENSDLEG00000007472) #25	CABP4 (ENSDLEG00000007479) #26	GPR152 (ENSDLEG00000007487) #27	CORO1B (ENSDLEG00000007489)	RPS6KB2 (ENSDLEG00000007496)	PTPRCAP (ENSDLEG00000007502)	CARNS1 (ENSDLEG00000007504)	TBC1D10C (ENSDLEG00000007507)	PPP1CA (ENSDLEG00000000041)	RAD9A (ENSDLEG00000000070)	CLCF1 (ENSDLEG00000000088)	ENSDLEG00000000120	SSH3 (ENSDLEG00000000182)
Camelidae	ANCESTRAL SPECIES	18	ENSGT00940000156431 #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000162915	ENSGT00530000063359.B #13	ENSGT00960000191071	ENSGT00940000155904.e.b #14	ENSGT00940000163374.g #15	ENSGT00940000163889	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.e.a ##19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322	ENSGT00950000182928.A.a.b
Alpaca	MODERN SPECIES	1782																CDK2AP2 (ENSVPAG00000004070) #22
Arabian camel	MODERN SPECIES	1	KMT5B (ENSCDRG00005008575) #8	CHKA (ENSCDRG00005008677) #9	TCIRG1 (ENSCDRG00005009035) #10	NDUFS8 (ENSCDRG00005009196) #11	ALDH3B1 (ENSCDRG00005009325)	UNC93B1 (ENSCDRG00005009668) #13	ENSCDRG00005009764	ALDH3B2 (ENSCDRG00005009823) #14	ENSCDRG00005009949 #15	NUDT8 (ENSCDRG00005009988)	ENSCDRG00005010025 #17	NDUFV1 (ENSCDRG00005010077) #18	GSTP1-1 (ENSCDRG00005010333) ##19	ENSCDRG00005010431 #20	CABP2 (ENSCDRG00005010465) #21	CDK2AP2 (ENSCDRG00005010661) #22	PITPNM1 (ENSCDRG00005010686) #23	AIP (ENSCDRG00005010788) #24	ENSCDRG00005010854 #25	CABP4 (ENSCDRG00005011171) #26	GPR152 (ENSCDRG00005011272) #27	CORO1B (ENSCDRG00005011291)	RPS6KB2 (ENSCDRG00005011373)	CARNS1 (ENSCDRG00005011445)	TBC1D10C (ENSCDRG00005011591)	PPP1CA (ENSCDRG00005011737)	RAD9A (ENSCDRG00005011885)	CLCF1 (ENSCDRG00005011923)	POLD4 (ENSCDRG00005011964)	SSH3 (ENSCDRG00005012079)	ANKRD13D (ENSCDRG00005012263)
Suina	ANCESTRAL SPECIES	14	ENSGT00940000153377.B #7	ENSGT00940000156431 #8	ENSGT00950000182939.a.b.b #9	ENSGT00950000182881.a.b.a.b #10	ENSGT00390000003049 #11	ENSGT00940000155904.e.a #12	ENSGT00530000063359.B #13	ENSGT00940000155904.e.b #14	ENSGT00940000154816.a.a	ENSGT00940000162775 #16	ENSGT00940000162875 #17	ENSGT00390000010641 #18	ENSGT00940000163435.e.a ##19	ENSGT00940000164125 #20	ENSGT00940000159796 #21	ENSGT00940000160334 #22	ENSGT00940000161522 #23	ENSGT00390000001289.a #24	ENSGT00390000011766 #25	ENSGT00940000161468 #26	ENSGT01030000234639.B #27	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a	ENSGT00940000161287	ENSGT00940000153472.a.b	ENSGT00390000005767.a	ENSGT00510000048856.C	ENSGT00390000005096	ENSGT00940000160322
Pig	MODERN SPECIES	10	ENSSSCG00000012886 #7	KMT5B (ENSSSCG00000031459) #8	CHKA (ENSSSCG00000012889) #9	TCIRG1 (ENSSSCG00000012890) #10	NDUFS8 (ENSSSCG00000037455) #11	ENSSSCG00000028501 #12	UNC93B1 (ENSSSCG00000012893) #13	ALDH3B2 (ENSSSCG00000026349) #14	TBX10 (ENSSSCG00000034410)	ENSSSCG00000035645 #16	ENSSSCG00000052603 #17	NDUFV1 (ENSSSCG00000012896) #18	ENSSSCG00000032003 ##19	ENSSSCG00000060071 #20	CABP2 (ENSSSCG00000020764) #21	CDK2AP2 (ENSSSCG00000012902) #22	PITPNM1 (ENSSSCG00000012903) #23	AIP (ENSSSCG00000062981) #24	TMEM134 (ENSSSCG00000012905) #25	CABP4 (ENSSSCG00000012906) #26	GPR152 (ENSSSCG00000059139) #27	CORO1B (ENSSSCG00000012920)	PTPRCAP (ENSSSCG00000012909)	RPS6KB2 (ENSSSCG00000012910)	CARNS1 (ENSSSCG00000012911)	TBC1D10C (ENSSSCG00000012912)	PPP1CA (ENSSSCG00000012913)	RAD9A (ENSSSCG00000012914)	CLCF1 (ENSSSCG00000012915)	POLD4 (ENSSSCG00000012916)	SSH3 (ENSSSCG00000027956)
Chacoan peccary	MODERN SPECIES	921	ENSCWAG00000006195 #7	KMT5B (ENSCWAG00000006216) #8	CHKA (ENSCWAG00000006285) #9	TCIRG1 (ENSCWAG00000006382) #10	NDUFS8 (ENSCWAG00000006464) #11	ENSCWAG00000006537 #12	UNC93B1 (ENSCWAG00000006584) #13	ALDH3B2 (ENSCWAG00000006631) #14	TBX10 (ENSCWAG00000006811)	ENSCWAG00000006858 #16	ENSCWAG00000006879 #17	NDUFV1 (ENSCWAG00000006939) #18	ENSCWAG00000007036 ##19	ENSCWAG00000007049 #20	CABP2 (ENSCWAG00000007074) #21	CDK2AP2 (ENSCWAG00000007150) #22	PITPNM1 (ENSCWAG00000007166) #23	AIP (ENSCWAG00000007192) #24	TMEM134 (ENSCWAG00000007220) #25	CABP4 (ENSCWAG00000007263) #26	GPR152 (ENSCWAG00000007292) #27	CORO1B (ENSCWAG00000007304)	PTPRCAP (ENSCWAG00000007330)	RPS6KB2 (ENSCWAG00000007341)	CARNS1 (ENSCWAG00000007375)	TBC1D10C (ENSCWAG00000007510)	ENSCWAG00000007570	RAD9A (ENSCWAG00000007635)	CLCF1 (ENSCWAG00000007645)	POLD4 (ENSCWAG00000007670)	ENSCWAG00000007703