Tetrapoda	ANCESTRAL SPECIES		ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.A ##16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT00940000158338	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Amniota	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00950000183061.b ##13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT00940000158338	ENSGT00940000155565	ENSGT00940000160798
Mammalia	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00950000183061.b ##13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Theria	ANCESTRAL SPECIES	1	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Eutheria	ANCESTRAL SPECIES	17	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Primates	ANCESTRAL SPECIES	29	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00390000003602	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956.ib.b #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000153232.a.b.p ##25	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Cebidae	ANCESTRAL SPECIES	26	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956.ib.b #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000153232.a.b.p ##25	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956.ib.b #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000153232.a.b.p ##25	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Capuchin	MODERN SPECIES	108	N4BP2L1 (ENSCCAG00000030025) #7	ENSCCAG00000027297 #8	N4BP2L2 (ENSCCAG00000036646) #9	ENSCCAG00000027860 #10	PDS5B (ENSCCAG00000027078) #11	KL (ENSCCAG00000029276) #12	STARD13 (ENSCCAG00000037627) #13	ENSCCAG00000035762 #14	RFC3 (ENSCCAG00000037995) #15	NBEA (ENSCCAG00000030780) #16	MAB21L1 (ENSCCAG00000020241) #17	ENSCCAG00000004898 #18	SOHLH2 (ENSCCAG00000005200) #19	CCDC169 (ENSCCAG00000029292) #20	SPART (ENSCCAG00000034556) #21	CCNA1 (ENSCCAG00000031585) #22	ENSCCAG00000022853 #23	SERTM1 (ENSCCAG00000019130) #24	ENSCCAG00000022284 #25	RFXAP (ENSCCAG00000035871) #26	SMAD9 (ENSCCAG00000033807) #27	ENSCCAG00000034183 #28	ENSCCAG00000030287 #29	ALG5 (ENSCCAG00000026389) #30	EXOSC8 (ENSCCAG00000023491) #31	SUPT20H (ENSCCAG00000017677) #32	POSTN (ENSCCAG00000036088) #33	TRPC4 (ENSCCAG00000027382) #34	ENSCCAG00000020843 #35
Bolivian squirrel monkey	MODERN SPECIES	106				N4BP2L2 (ENSSBOG00000027888) #9	PDS5B (ENSSBOG00000024183) #11	ENSSBOG00000007092	KL (ENSSBOG00000021191) #12	STARD13 (ENSSBOG00000033967) #13	RFC3 (ENSSBOG00000002113) #15	MAB21L1 (ENSSBOG00000015537) #17	NBEA (ENSSBOG00000036122) #16	DCLK1 (ENSSBOG00000035278) ##18	SOHLH2 (ENSSBOG00000034504) #19	CCDC169 (ENSSBOG00000030756) #20	SPART (ENSSBOG00000022178) #21	CCNA1 (ENSSBOG00000024788) #22	ENSSBOG00000031402	SERTM1 (ENSSBOG00000018464) #24	ENSSBOG00000031771 ##25	RFXAP (ENSSBOG00000027209) #26	SMAD9 (ENSSBOG00000030748) #27	ENSSBOG00000024625	ALG5 (ENSSBOG00000033076) #30	EXOSC8 (ENSSBOG00000004631) #31	SUPT20H (ENSSBOG00000031822) #32	POSTN (ENSSBOG00000020359) #33	TRPC4 (ENSSBOG00000024580) #34	ENSSBOG00000033160	FREM2 (ENSSBOG00000029178)	STOML3 (ENSSBOG00000025427)	PROSER1 (ENSSBOG00000004637)
Marmoset	MODERN SPECIES	17	ENSCJAG00000018437 #9	PDS5B (ENSCJAG00000018428) #11	ENSCJAG00000068003	KL (ENSCJAG00000018421) #12	STARD13 (ENSCJAG00000018399) #13	RFC3 (ENSCJAG00000018380) #15	NBEA (ENSCJAG00000018225) #16	ENSCJAG00000086918	MAB21L1 (ENSCJAG00000081780) #17	ENSCJAG00000070934	DCLK1 (ENSCJAG00000018203) ##18	SOHLH2 (ENSCJAG00000018188) #19	ENSCJAG00000069855	CCDC169 (ENSCJAG00000031495) #20	SPART (ENSCJAG00000044775) #21	CCNA1 (ENSCJAG00000018144) #22	ENSCJAG00000081958	ENSCJAG00000083593	ENSCJAG00000070206	RFXAP (ENSCJAG00000072585) #26	SMAD9 (ENSCJAG00000040391) #27	ALG5 (ENSCJAG00000018099) #30	EXOSC8 (ENSCJAG00000018078) #31	SUPT20H (ENSCJAG00000018002) #32	CSNK1A1L (ENSCJAG00000018001)	ENSCJAG00000086963	POSTN (ENSCJAG00000017968) #33	TRPC4 (ENSCJAG00000017909) #34	ENSCJAG00000017903	ENSCJAG00000075533	FREM2 (ENSCJAG00000017883)
Mas night monkey	MODERN SPECIES	1366	ENSANAG00000037444 #10	PDS5B (ENSANAG00000020920) #11	KL (ENSANAG00000028905) #12	ENSANAG00000030076	STARD13 (ENSANAG00000018248) #13	ENSANAG00000029740 #14	ENSANAG00000025512	RFC3 (ENSANAG00000020441) #15	ENSANAG00000013822	MAB21L1 (ENSANAG00000006106) #17	NBEA (ENSANAG00000035835) #16	ENSANAG00000034415 #18	SOHLH2 (ENSANAG00000027740) #19	CCDC169 (ENSANAG00000027605) #20	SPART (ENSANAG00000031821) #21	CCNA1 (ENSANAG00000029985) #22	SERTM1 (ENSANAG00000003737) #24	ENSANAG00000030452 ##25	RFXAP (ENSANAG00000028911) #26	SMAD9 (ENSANAG00000014308) #27	ENSANAG00000019108	ALG5 (ENSANAG00000036730) #30	EXOSC8 (ENSANAG00000028910) #31	SUPT20H (ENSANAG00000034846) #32
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Hominidae	ANCESTRAL SPECIES	23	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00390000003602	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b.a	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Gorilla	MODERN SPECIES	4	BRCA2 (ENSGGOG00000015808)	N4BP2L1 (ENSGGOG00000015849) #7	ENSGGOG00000025412 #8	ENSGGOG00000025225 #9	ENSGGOG00000040611	PDS5B (ENSGGOG00000004950) #11	ENSGGOG00000007260 #12	STARD13 (ENSGGOG00000006398) #13	RFC3 (ENSGGOG00000017192) #15	NBEA (ENSGGOG00000011724) #16	ENSGGOG00000037758	MAB21L1 (ENSGGOG00000011768) #17	DCLK1 (ENSGGOG00000006447) #18	SOHLH2 (ENSGGOG00000002130) #19	SPART (ENSGGOG00000014695) #21	CCNA1 (ENSGGOG00000025062) #22	SERTM1 (ENSGGOG00000040932) #24	RFXAP (ENSGGOG00000025564) #26	SMAD9 (ENSGGOG00000001017) #27	ENSGGOG00000040246	ENSGGOG00000037488 ##29	ALG5 (ENSGGOG00000003094) #30	EXOSC8 (ENSGGOG00000011902) #31	SUPT20H (ENSGGOG00000011916) #32	CSNK1A1L (ENSGGOG00000000169)	ENSGGOG00000023061	POSTN (ENSGGOG00000006685) #33	TRPC4 (ENSGGOG00000007142) #34	ENSGGOG00000026214	ENSGGOG00000023208	STOML3 (ENSGGOG00000011813)
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00390000003602	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b.a	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Human	MODERN SPECIES	4	ZAR1L (ENSG00000189167)	BRCA2 (ENSG00000139618)	N4BP2L1 (ENSG00000139597) #7	N4BP2L2 (ENSG00000244754) #9	PDS5B (ENSG00000083642) #11	KL (ENSG00000133116) #12	STARD13 (ENSG00000133121) #13	RFC3 (ENSG00000133119) #15	NBEA (ENSG00000172915) #16	MAB21L1 (ENSG00000180660) #17	DCLK1 (ENSG00000133083) #18	SOHLH2 (ENSG00000120669) #19	CCDC169-SOHLH2 (ENSG00000250709)	CCDC169 (ENSG00000242715) #20	SPART (ENSG00000133104) #21	CCNA1 (ENSG00000133101) #22	SERTM1 (ENSG00000180440) #24	RFXAP (ENSG00000133111) #26	SMAD9 (ENSG00000120693) #27	ALG5 (ENSG00000120697) #30	EXOSC8 (ENSG00000120699) #31	SUPT20H (ENSG00000102710) #32	CSNK1A1L (ENSG00000180138)	POSTN (ENSG00000133110) #33	TRPC4 (ENSG00000133107) #34	UFM1 (ENSG00000120686)	FREM2 (ENSG00000150893)	STOML3 (ENSG00000133115)	PROSER1 (ENSG00000120685)	NHLRC3 (ENSG00000188811)	LHFPL6 (ENSG00000183722)
Pan	ANCESTRAL SPECIES	22	ENSGT00390000003602	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b.a	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153889.e.b.a.d.b.b ##29	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Bonobo	MODERN SPECIES	4	BRCA2 (ENSPPAG00000002166)	N4BP2L1 (ENSPPAG00000040605) #7	ENSPPAG00000021320 #8	ENSPPAG00000040613 #9	ENSPPAG00000024500	PDS5B (ENSPPAG00000001775) #11	KL (ENSPPAG00000030075) #12	STARD13 (ENSPPAG00000038509) #13	RFC3 (ENSPPAG00000031926) #15	NBEA (ENSPPAG00000001485) #16	MAB21L1 (ENSPPAG00000032980) #17	DCLK1 (ENSPPAG00000038110) #18	SOHLH2 (ENSPPAG00000025183) #19	CCDC169 (ENSPPAG00000029270) #20	SPART (ENSPPAG00000038329) #21	CCNA1 (ENSPPAG00000042674) #22	SERTM1 (ENSPPAG00000006727) #24	RFXAP (ENSPPAG00000028456) #26	SMAD9 (ENSPPAG00000029124) #27	ENSPPAG00000027347 ##29	ALG5 (ENSPPAG00000036853) #30	EXOSC8 (ENSPPAG00000027267) #31	SUPT20H (ENSPPAG00000030496) #32	CSNK1A1L (ENSPPAG00000019808)	POSTN (ENSPPAG00000029550) #33	TRPC4 (ENSPPAG00000026964) #34	ENSPPAG00000031558	ENSPPAG00000032590	FREM2 (ENSPPAG00000033536)	STOML3 (ENSPPAG00000036339)	PROSER1 (ENSPPAG00000041489)
Chimpanzee	MODERN SPECIES	4	BRCA2 (ENSPTRG00000005766)	N4BP2L1 (ENSPTRG00000045602) #7	ENSPTRG00000048653 #8	N4BP2L2 (ENSPTRG00000005770) #9	ENSPTRG00000045346	PDS5B (ENSPTRG00000005771) #11	KL (ENSPTRG00000005772) #12	STARD13 (ENSPTRG00000005773) #13	RFC3 (ENSPTRG00000005774) #15	NBEA (ENSPTRG00000005775) #16	MAB21L1 (ENSPTRG00000005777) #17	DCLK1 (ENSPTRG00000005778) #18	SOHLH2 (ENSPTRG00000005779) #19	CCDC169 (ENSPTRG00000046000) #20	SPART (ENSPTRG00000005782) #21	CCNA1 (ENSPTRG00000005784) #22	SERTM1 (ENSPTRG00000051107) #24	RFXAP (ENSPTRG00000005787) #26	SMAD9 (ENSPTRG00000005788) #27	ENSPTRG00000050879 ##29	ALG5 (ENSPTRG00000005789) #30	EXOSC8 (ENSPTRG00000005790) #31	SUPT20H (ENSPTRG00000005791) #32	CSNK1A1L (ENSPTRG00000005793)	POSTN (ENSPTRG00000005794) #33	TRPC4 (ENSPTRG00000005795) #34	UFM1 (ENSPTRG00000043532)	ENSPTRG00000050237	FREM2 (ENSPTRG00000005800)	STOML3 (ENSPTRG00000005801)	PROSER1 (ENSPTRG00000005802)
Orangutan	MODERN SPECIES	4	BRCA2 (ENSPPYG00000005264)	N4BP2L1 (ENSPPYG00000038196) #7	ENSPPYG00000005266 #8	N4BP2L2 (ENSPPYG00000005268) #9	PDS5B (ENSPPYG00000005269) #11	KL (ENSPPYG00000005270) #12	STARD13 (ENSPPYG00000005271) #13	ENSPPYG00000038733 #14	RFC3 (ENSPPYG00000005272) #15	NBEA (ENSPPYG00000005273) #16	MAB21L1 (ENSPPYG00000005274) #17	DCLK1 (ENSPPYG00000005275) #18	SOHLH2 (ENSPPYG00000005276) #19	CCDC169 (ENSPPYG00000005278) #20	SPART (ENSPPYG00000005279) #21	CCNA1 (ENSPPYG00000005281) #22	SERTM1 (ENSPPYG00000005282) #24	RFXAP (ENSPPYG00000005284) #26	ALG5 (ENSPPYG00000005286) #30	ENSPPYG00000005287 #31	SUPT20H (ENSPPYG00000005288) #32	CSNK1A1L (ENSPPYG00000005290)	POSTN (ENSPPYG00000005291) #33	TRPC4 (ENSPPYG00000005292) #34	UFM1 (ENSPPYG00000040474)	FREM2 (ENSPPYG00000005296)	STOML3 (ENSPPYG00000005297)	PROSER1 (ENSPPYG00000005298)	NHLRC3 (ENSPPYG00000005299)	LHFPL6 (ENSPPYG00000005300)	COG6 (ENSPPYG00000005301)
Gibbon	MODERN SPECIES	160																CCNA1 (ENSNLEG00000015620) #22
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00390000017100 #8	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00390000005732.u.b	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00390000007084.c.a.d.d	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00390000010799.u.b.a.a.b.o.b.a	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00390000010799.u.b.a.a.b.o.b.a	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00390000010391.w.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	54	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00950000183198.c.a.b.b	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00910000147726	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00390000010799.u.b.a.a.b.o.b.a	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Drill	MODERN SPECIES	1102											ENSMLEG00000038610	DCLK1 (ENSMLEG00000042752) #18	SOHLH2 (ENSMLEG00000042914) #19	CCDC169 (ENSMLEG00000040098) #20	SPART (ENSMLEG00000038819) #21	CCNA1 (ENSMLEG00000038108) #22	SERTM1 (ENSMLEG00000024879) #24	RFXAP (ENSMLEG00000037801) #26	SMAD9 (ENSMLEG00000036218) #27	ALG5 (ENSMLEG00000037873) #30	EXOSC8 (ENSMLEG00000040861) #31	SUPT20H (ENSMLEG00000029814) #32	CSNK1A1L (ENSMLEG00000041267)	ENSMLEG00000024334	POSTN (ENSMLEG00000030479) #33	TRPC4 (ENSMLEG00000030107) #34	ENSMLEG00000041579	ENSMLEG00000040471	FREM2 (ENSMLEG00000022826)	STOML3 (ENSMLEG00000036427)	PROSER1 (ENSMLEG00000043683)
Sooty mangabey	MODERN SPECIES	125	BRCA2 (ENSCATG00000031672)	N4BP2L1 (ENSCATG00000036810) #7	ENSCATG00000035005 #9	ENSCATG00000028940	PDS5B (ENSCATG00000035609) #11	KL (ENSCATG00000044821) #12	STARD13 (ENSCATG00000044788) #13	RFC3 (ENSCATG00000012595) #15	MAB21L1 (ENSCATG00000012712) #17	NBEA (ENSCATG00000030242) #16	ENSCATG00000035271	DCLK1 (ENSCATG00000011868) #18	SOHLH2 (ENSCATG00000042220) #19	CCDC169 (ENSCATG00000031543) #20	SPART (ENSCATG00000044880) #21	CCNA1 (ENSCATG00000039173) #22	SERTM1 (ENSCATG00000012042) #24	RFXAP (ENSCATG00000041486) #26	SMAD9 (ENSCATG00000040048) #27	ALG5 (ENSCATG00000032576) #30	EXOSC8 (ENSCATG00000040502) #31	SUPT20H (ENSCATG00000038431) #32	CSNK1A1L (ENSCATG00000035551)	ENSCATG00000032987	POSTN (ENSCATG00000008419) #33	TRPC4 (ENSCATG00000045261) #34	ENSCATG00000042038	UFM1 (ENSCATG00000044815)	FREM2 (ENSCATG00000040998)	STOML3 (ENSCATG00000034392)	PROSER1 (ENSCATG00000033393)
Olive baboon	MODERN SPECIES	6	N4BP2L1 (ENSPANG00000019751) #7	ENSPANG00000017987 #9	PDS5B (ENSPANG00000012753) #11	KL (ENSPANG00000015481) #12	STARD13 (ENSPANG00000021855) #13	RFC3 (ENSPANG00000013152) #15	ENSPANG00000045015	ENSPANG00000041944	ENSPANG00000040588	ENSPANG00000050168	ENSPANG00000042024	NBEA (ENSPANG00000034571) #16	MAB21L1 (ENSPANG00000050080) #17	DCLK1 (ENSPANG00000003398) #18	SPART (ENSPANG00000018678) #21	CCNA1 (ENSPANG00000021629) #22	SERTM1 (ENSPANG00000006795) #24	RFXAP (ENSPANG00000021854) #26	SMAD9 (ENSPANG00000014460) #27	ALG5 (ENSPANG00000005232) #30	EXOSC8 (ENSPANG00000019344) #31	SUPT20H (ENSPANG00000022863) #32	CSNK1A1L (ENSPANG00000038025)	ENSPANG00000042277	ENSPANG00000040278	POSTN (ENSPANG00000009523) #33	TRPC4 (ENSPANG00000023049) #34	UFM1 (ENSPANG00000050784)	FREM2 (ENSPANG00000006217)	STOML3 (ENSPANG00000012476)	PROSER1 (ENSPANG00000000887)
Macaca	ANCESTRAL SPECIES	19	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00910000147726	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00390000007084.c.a.d.d	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00390000010799.u.b.a.a.b.o.b.a	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00910000147726	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00390000007084.c.a.d.d	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Rhesus	MODERN SPECIES	8	BRCA2 (ENSMMUG00000007197)	N4BP2L1 (ENSMMUG00000007198) #7	N4BP2L2 (ENSMMUG00000007200) #9	PDS5B (ENSMMUG00000007201) #11	KL (ENSMMUG00000017048) #12	ENSMMUG00000063615	STARD13 (ENSMMUG00000017052) #13	RFC3 (ENSMMUG00000003371) #15	ENSMMUG00000049825	ENSMMUG00000059851	NBEA (ENSMMUG00000019831) #16	MAB21L1 (ENSMMUG00000054545) #17	DCLK1 (ENSMMUG00000016791) #18	SOHLH2 (ENSMMUG00000001172) #19	SPART (ENSMMUG00000001176) #21	CCNA1 (ENSMMUG00000001178) #22	SERTM1 (ENSMMUG00000057607) #24	RFXAP (ENSMMUG00000009913) #26	SMAD9 (ENSMMUG00000009914) #27	ENSMMUG00000057493	ALG5 (ENSMMUG00000003585) #30	EXOSC8 (ENSMMUG00000003588) #31	SUPT20H (ENSMMUG00000003590) #32	CSNK1A1L (ENSMMUG00000005012)	POSTN (ENSMMUG00000012307) #33	TRPC4 (ENSMMUG00000030786) #34	ENSMMUG00000062570	UFM1 (ENSMMUG00000058145)	FREM2 (ENSMMUG00000002702)	NHLRC3 (ENSMMUG00000002113)	STOML3 (ENSMMUG00000002107)
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000002717 #7	ENSMFAG00000061510	N4BP2L2 (ENSMFAG00000007968) #9	PDS5B (ENSMFAG00000037386) #11	KL (ENSMFAG00000035814) #12	STARD13 (ENSMFAG00000044541) #13	RFC3 (ENSMFAG00000041839) #15	ENSMFAG00000053666	NBEA (ENSMFAG00000033753) #16	MAB21L1 (ENSMFAG00000040502) #17	DCLK1 (ENSMFAG00000030114) #18	ENSMFAG00000051768	SOHLH2 (ENSMFAG00000031914) #19	CCDC169 (ENSMFAG00000032877) #20	SPART (ENSMFAG00000033182) #21	CCNA1 (ENSMFAG00000035978) #22	SERTM1 (ENSMFAG00000040245) #24	RFXAP (ENSMFAG00000043454) #26	SMAD9 (ENSMFAG00000045013) #27	ALG5 (ENSMFAG00000019220) #30	EXOSC8 (ENSMFAG00000027794) #31	SUPT20H (ENSMFAG00000031911) #32	CSNK1A1L (ENSMFAG00000035822)	POSTN (ENSMFAG00000045597) #33	TRPC4 (ENSMFAG00000032156) #34	ENSMFAG00000058227	UFM1 (ENSMFAG00000004000)	FREM2 (ENSMFAG00000002618)	STOML3 (ENSMFAG00000037302)	PROSER1 (ENSMFAG00000003151)	NHLRC3 (ENSMFAG00000001573)
Pig-tailed macaque	MODERN SPECIES	125	BRCA2 (ENSMNEG00000036002)	N4BP2L1 (ENSMNEG00000039181) #7	ENSMNEG00000035638 #9	PDS5B (ENSMNEG00000043516) #11	KL (ENSMNEG00000043961) #12	STARD13 (ENSMNEG00000034305) #13	RFC3 (ENSMNEG00000032691) #15	NBEA (ENSMNEG00000028837) #16	ENSMNEG00000014654	MAB21L1 (ENSMNEG00000013264) #17	DCLK1 (ENSMNEG00000028724) #18	ENSMNEG00000045366	SOHLH2 (ENSMNEG00000038071) #19	CCDC169 (ENSMNEG00000045062) #20	SPART (ENSMNEG00000042733) #21	CCNA1 (ENSMNEG00000028737) #22	SERTM1 (ENSMNEG00000027398) #24	RFXAP (ENSMNEG00000028015) #26	SMAD9 (ENSMNEG00000034825) #27	ALG5 (ENSMNEG00000038215) #30	EXOSC8 (ENSMNEG00000032970) #31	SUPT20H (ENSMNEG00000031747) #32	CSNK1A1L (ENSMNEG00000034321)	ENSMNEG00000036059	POSTN (ENSMNEG00000034890) #33	TRPC4 (ENSMNEG00000028129) #34	UFM1 (ENSMNEG00000041507)	ENSMNEG00000039851
Vervet Monkey	MODERN SPECIES	22	ZAR1L (ENSCSAG00000017921)	BRCA2 (ENSCSAG00000017920)	N4BP2L1 (ENSCSAG00000017915) #7	ENSCSAG00000017912 #9	PDS5B (ENSCSAG00000017909) #11	KL (ENSCSAG00000017903) #12	STARD13 (ENSCSAG00000017899) #13	RFC3 (ENSCSAG00000017897) #15	MAB21L1 (ENSCSAG00000018594) #17	ENSCSAG00000017888 #16	ENSCSAG00000017885 #18	ENSCSAG00000017883 #18	SOHLH2 (ENSCSAG00000017881) #19	ENSCSAG00000017880	SPART (ENSCSAG00000017878) #21	CCNA1 (ENSCSAG00000017875) #22	SERTM1 (ENSCSAG00000018595) #24	RFXAP (ENSCSAG00000017874) #26	SMAD9 (ENSCSAG00000017872) #27	ENSCSAG00000017871	ALG5 (ENSCSAG00000017869) #30	EXOSC8 (ENSCSAG00000017867) #31	SUPT20H (ENSCSAG00000017865) #32	CSNK1A1L (ENSCSAG00000018597)	POSTN (ENSCSAG00000017861) #33	ENSCSAG00000017857 #34	UFM1 (ENSCSAG00000017856)	FREM2 (ENSCSAG00000017855)	STOML3 (ENSCSAG00000017851)	PROSER1 (ENSCSAG00000017848)	NHLRC3 (ENSCSAG00000017845)
Rhinopithecus	ANCESTRAL SPECIES	218										ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.q #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000015052.i.a.p	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000164967	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.x	ENSGT00910000147020	ENSGT00910000147198	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b
Golden snub-nosed monkey	MODERN SPECIES	2400										MAB21L1 (ENSRROG00000003303) #17	ENSRROG00000033513 #16	DCLK1 (ENSRROG00000019788) #18	SOHLH2 (ENSRROG00000036653) #19	CCDC169 (ENSRROG00000028774) #20	SPART (ENSRROG00000002746) #21	CCNA1 (ENSRROG00000035358) #22	SERTM1 (ENSRROG00000020141) #24	ENSRROG00000039277	RFXAP (ENSRROG00000036015) #26	SMAD9 (ENSRROG00000043963) #27	ALG5 (ENSRROG00000033449) #30	ENSRROG00000022383 #31	SUPT20H (ENSRROG00000041327) #32	CSNK1A1L (ENSRROG00000041282)	POSTN (ENSRROG00000037739) #33	TRPC4 (ENSRROG00000020511) #34
Black snub-nosed monkey	MODERN SPECIES	1669										MAB21L1 (ENSRBIG00000007791) #17	ENSRBIG00000043596 #16	DCLK1 (ENSRBIG00000027120) #18	ENSRBIG00000017087 #19	CCDC169 (ENSRBIG00000042832) #20	SPART (ENSRBIG00000036954) #21	CCNA1 (ENSRBIG00000036022) #22	SERTM1 (ENSRBIG00000024038) #24	ENSRBIG00000033561	RFXAP (ENSRBIG00000043307) #26	SMAD9 (ENSRBIG00000043801) #27	ALG5 (ENSRBIG00000044936) #30	EXOSC8 (ENSRBIG00000027590) #31	SUPT20H (ENSRBIG00000007718) #32	CSNK1A1L (ENSRBIG00000029774)	POSTN (ENSRBIG00000044469) #33	TRPC4 (ENSRBIG00000043904) #34	ENSRBIG00000034909	ENSRBIG00000039936	ENSRBIG00000007896	FREM2 (ENSRBIG00000025655)	STOML3 (ENSRBIG00000045015)
Tarsier	MODERN SPECIES	4842										MAB21L1 (ENSTSYG00000034363) #17	NBEA (ENSTSYG00000032451) #16	DCLK1 (ENSTSYG00000009831) #18	SOHLH2 (ENSTSYG00000004449) #19	CCDC169 (ENSTSYG00000001058) #20	SPART (ENSTSYG00000003106) #21	CCNA1 (ENSTSYG00000005971) #22
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Mouse lemur	MODERN SPECIES	4	ZAR1L (ENSMICG00000037332)	BRCA2 (ENSMICG00000041755)	N4BP2L1 (ENSMICG00000035139) #7	N4BP2L2 (ENSMICG00000012027) #9	PDS5B (ENSMICG00000005747) #11	KL (ENSMICG00000006234) #12	STARD13 (ENSMICG00000006239) #13	ENSMICG00000045628	RFC3 (ENSMICG00000015059) #15	MAB21L1 (ENSMICG00000043536) #17	NBEA (ENSMICG00000031103) #16	DCLK1 (ENSMICG00000014330) #18	SOHLH2 (ENSMICG00000002484) #19	CCDC169 (ENSMICG00000046020) #20	SPART (ENSMICG00000002494) #21	CCNA1 (ENSMICG00000002509) #22	SERTM1 (ENSMICG00000044400) #24	RFXAP (ENSMICG00000030008) #26	SMAD9 (ENSMICG00000042342) #27	ALG5 (ENSMICG00000003347) #30	EXOSC8 (ENSMICG00000003353) #31	SUPT20H (ENSMICG00000003358) #32	POSTN (ENSMICG00000015465) #33	TRPC4 (ENSMICG00000011068) #34	UFM1 (ENSMICG00000042483)	FREM2 (ENSMICG00000003191)	STOML3 (ENSMICG00000003204)	PROSER1 (ENSMICG00000010238)	NHLRC3 (ENSMICG00000010249)	LHFPL6 (ENSMICG00000001594)	COG6 (ENSMICG00000001598)
Lemuriformes_a	ANCESTRAL SPECIES	41	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Coquerels sifaka	MODERN SPECIES	296	CAPN2 (ENSPCOG00000022676)	CAPN8 (ENSPCOG00000020364)	SUSD4 (ENSPCOG00000011601)	DISP1 (ENSPCOG00000009108)	FAM177B (ENSPCOG00000012430)	BROX (ENSPCOG00000026274)	ENSPCOG00000023670 #16	ENSPCOG00000023749	MAB21L1 (ENSPCOG00000014059) #17	ENSPCOG00000016847 #16	ENSPCOG00000016947 #18	SOHLH2 (ENSPCOG00000028061) #19	ENSPCOG00000012239	ENSPCOG00000009000	SPART (ENSPCOG00000023572) #21	CCNA1 (ENSPCOG00000025312) #22	SERTM1 (ENSPCOG00000026866) #24	RFXAP (ENSPCOG00000011817) #26	SMAD9 (ENSPCOG00000021261) #27	ALG5 (ENSPCOG00000019336) #30	EXOSC8 (ENSPCOG00000018867) #31	SUPT20H (ENSPCOG00000028527) #32
Greater bamboo lemur	MODERN SPECIES	612												DCLK1 (ENSPSMG00000021995) #18	SOHLH2 (ENSPSMG00000021921) #19	CCDC169 (ENSPSMG00000021912) #20	SPART (ENSPSMG00000021898) #21	CCNA1 (ENSPSMG00000021881) #22	SERTM1 (ENSPSMG00000021873) #24	RFXAP (ENSPSMG00000021869) #26	SMAD9 (ENSPSMG00000021821) #27	ALG5 (ENSPSMG00000021766) #30	EXOSC8 (ENSPSMG00000021716) #31	SUPT20H (ENSPSMG00000021654) #32	ENSPSMG00000021564	POSTN (ENSPSMG00000021536) #33	TRPC4 (ENSPSMG00000021381) #34	ENSPSMG00000021278	UFM1 (ENSPSMG00000021274)
Bushbaby	MODERN SPECIES	393																CCNA1 (ENSOGAG00000010375) #22	ENSOGAG00000034211	SERTM1 (ENSOGAG00000028142) #24	RFXAP (ENSOGAG00000002740) #26	ENSOGAG00000002742	ALG5 (ENSOGAG00000002743) #30	EXOSC8 (ENSOGAG00000002745) #31	SUPT20H (ENSOGAG00000002746) #32	ENSOGAG00000030572
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Glires	ANCESTRAL SPECIES	22	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Rodentia	ANCESTRAL SPECIES	22	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000160886.q.b.a	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000170406	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Marmotini	ANCESTRAL SPECIES	29	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000160886.q.b.a	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000170406	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.k	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000160886.q.b.a	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00940000170406	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34
Squirrel	MODERN SPECIES	72	RXFP2 (ENSSTOG00000010636)	FRY (ENSSTOG00000013718)	ZAR1L (ENSSTOG00000005506)	ENSSTOG00000005517	N4BP2L1 (ENSSTOG00000005584) #7	ENSSTOG00000030222 #9	PDS5B (ENSSTOG00000001429) #11	KL (ENSSTOG00000024168) #12	STARD13 (ENSSTOG00000006622) #13	RFC3 (ENSSTOG00000000378) #15	NBEA (ENSSTOG00000012208) #16	MAB21L1 (ENSSTOG00000009634) #17	DCLK1 (ENSSTOG00000012243) #18	CCDC169 (ENSSTOG00000033458) #20	SPART (ENSSTOG00000014775) #21	CCNA1 (ENSSTOG00000003628) #22	SERTM1 (ENSSTOG00000020432) #24	ENSSTOG00000020448	RFXAP (ENSSTOG00000028189) #26	SMAD9 (ENSSTOG00000007103) #27	ALG5 (ENSSTOG00000002027) #30	ENSSTOG00000033110 #31	ENSSTOG00000029569	POSTN (ENSSTOG00000000785) #33	TRPC4 (ENSSTOG00000000791) #34
Arctic ground squirrel	MODERN SPECIES	151					PDS5B (ENSUPAG00010000150) #11	KL (ENSUPAG00010000585) #12	STARD13 (ENSUPAG00010000595) #13	RFC3 (ENSUPAG00010000673) #15	NBEA (ENSUPAG00010000696) #16	MAB21L1 (ENSUPAG00010000814) #17	DCLK1 (ENSUPAG00010000839) #18	ENSUPAG00010001798	SOHLH2 (ENSUPAG00010001811) #19	CCDC169 (ENSUPAG00010001871) #20	SPART (ENSUPAG00010001898) #21	CCNA1 (ENSUPAG00010001949) #22	SERTM1 (ENSUPAG00010001992) #24	ENSUPAG00010001995	RFXAP (ENSUPAG00010002005) #26	ENSUPAG00010002021	ALG5 (ENSUPAG00010002045) #30	EXOSC8 (ENSUPAG00010002070) #31	SUPT20H (ENSUPAG00010002093) #32
Alpin marmot	MODERN SPECIES	13	N4BP2L2 (ENSMMMG00000022165) #9	ENSMMMG00000022166	ENSMMMG00000022169	PDS5B (ENSMMMG00000022194) #11	KL (ENSMMMG00000022232) #12	STARD13 (ENSMMMG00000022235) #13	RFC3 (ENSMMMG00000022269) #15	NBEA (ENSMMMG00000022327) #16	ENSMMMG00000022359	MAB21L1 (ENSMMMG00000022365) #17	DCLK1 (ENSMMMG00000022381) #18	ENSMMMG00000022597	SOHLH2 (ENSMMMG00000022599) #19	CCDC169 (ENSMMMG00000022606) #20	SPART (ENSMMMG00000022611) #21	CCNA1 (ENSMMMG00000022623) #22	SERTM1 (ENSMMMG00000022628) #24	RFXAP (ENSMMMG00000022632) #26	ENSMMMG00000022634	ALG5 (ENSMMMG00000022636) #30	EXOSC8 (ENSMMMG00000022642) #31	SUPT20H (ENSMMMG00000022648) #32	ENSMMMG00000022672	POSTN (ENSMMMG00000022684) #33	TRPC4 (ENSMMMG00000022717) #34	UFM1 (ENSMMMG00000022725)	FREM2 (ENSMMMG00000022732)	STOML3 (ENSMMMG00000022739)	PROSER1 (ENSMMMG00000022742)	NHLRC3 (ENSMMMG00000022761)	LHFPL6 (ENSMMMG00000022780)
Eurasian red squirrel	MODERN SPECIES	13	N4BP2L1 (ENSSVLG00005013256) #7	ENSSVLG00005013108 #9	PDS5B (ENSSVLG00005012920) #11	ENSSVLG00005012874	ENSSVLG00005012836	KL (ENSSVLG00005012761) #12	STARD13 (ENSSVLG00005012412) #13	ENSSVLG00005012094 #15	ENSSVLG00005012035	MAB21L1 (ENSSVLG00005012010) #17	NBEA (ENSSVLG00005010027) #16	DCLK1 (ENSSVLG00005009476) #18	SOHLH2 (ENSSVLG00005009335) #19	CCDC169 (ENSSVLG00005009253) #20	SPART (ENSSVLG00005009224) #21	CCNA1 (ENSSVLG00005009186) #22	SERTM1 (ENSSVLG00005009166) #24	ENSSVLG00005009129	RFXAP (ENSSVLG00005009115) #26	ENSSVLG00005009080	ALG5 (ENSSVLG00005009018) #30	EXOSC8 (ENSSVLG00005008946) #31	SUPT20H (ENSSVLG00005008744) #32	ENSSVLG00005008714	ENSSVLG00005008703	ENSSVLG00005008668	POSTN (ENSSVLG00005008543) #33	TRPC4 (ENSSVLG00005008080) #34	ENSSVLG00005008004	ENSSVLG00005007982	ENSSVLG00005007950
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.f #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.f #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.l.b	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Guinea pig	MODERN SPECIES	6	B3GLCT (ENSCPOG00000007455)	RXFP2 (ENSCPOG00000009157)	FRY (ENSCPOG00000003917)	BRCA2 (ENSCPOG00000005153)	N4BP2L1 (ENSCPOG00000003366) #7	ENSCPOG00000038887 #9	PDS5B (ENSCPOG00000033286) #11	KL (ENSCPOG00000002058) #12	STARD13 (ENSCPOG00000005976) #13	RFC3 (ENSCPOG00000008739) #15	NBEA (ENSCPOG00000004513) #16	DCLK1 (ENSCPOG00000005030) #18	ENSCPOG00000033603	CCDC169 (ENSCPOG00000037354) #20	SPART (ENSCPOG00000000296) #21	CCNA1 (ENSCPOG00000002606) #22	RFXAP (ENSCPOG00000010243) #26	ENSCPOG00000010255	ALG5 (ENSCPOG00000004447) #30	EXOSC8 (ENSCPOG00000004450) #31	SUPT20H (ENSCPOG00000004452) #32	ENSCPOG00000030129	POSTN (ENSCPOG00000001209) #33	Trpc4 (ENSCPOG00000011742) #34	UFM1 (ENSCPOG00000032508)	FREM2 (ENSCPOG00000008008)	STOML3 (ENSCPOG00000008399)	PROSER1 (ENSCPOG00000022300)	NHLRC3 (ENSCPOG00000034397)	ENSCPOG00000031874	LHFPL6 (ENSCPOG00000007234)
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.f #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.l.a	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Long-tailed chinchilla	MODERN SPECIES	138	ZAR1L (ENSCLAG00000004947)	BRCA2 (ENSCLAG00000005830)	N4BP2L1 (ENSCLAG00000004721) #7	ENSCLAG00000004607 #9	PDS5B (ENSCLAG00000003381) #11	KL (ENSCLAG00000004704) #12	STARD13 (ENSCLAG00000003814) #13	RFC3 (ENSCLAG00000003664) #15	ENSCLAG00000003179	MAB21L1 (ENSCLAG00000017521) #17	NBEA (ENSCLAG00000005089) #16	DCLK1 (ENSCLAG00000006827) #18	SOHLH2 (ENSCLAG00000005516) #19	CCDC169 (ENSCLAG00000005286) #20	SPART (ENSCLAG00000005026) #21	CCNA1 (ENSCLAG00000004772) #22	RFXAP (ENSCLAG00000005593) #26	ENSCLAG00000004108	ALG5 (ENSCLAG00000003827) #30	EXOSC8 (ENSCLAG00000003456) #31	SUPT20H (ENSCLAG00000006314) #32	POSTN (ENSCLAG00000005084) #33	TRPC4 (ENSCLAG00000010452) #34	ENSCLAG00000013090	FREM2 (ENSCLAG00000012778)	STOML3 (ENSCLAG00000013188)	ENSCLAG00000012047	PROSER1 (ENSCLAG00000011789)	NHLRC3 (ENSCLAG00000005695)	LHFPL6 (ENSCLAG00000005663)	COG6 (ENSCLAG00000003992)
Degu	MODERN SPECIES	79	PDS5B (ENSODEG00000006819) #11	ENSODEG00000019263	KL (ENSODEG00000006590) #12	STARD13 (ENSODEG00000006691) #13	ENSODEG00000007112 #15	MCM5 (ENSODEG00000005912)	NBEA (ENSODEG00000006275) #16	ENSODEG00000008552	MAB21L1 (ENSODEG00000019299) #17	ENSODEG00000006935	ENSODEG00000019680	DCLK1 (ENSODEG00000006680) #18	ENSODEG00000007164	CCDC169 (ENSODEG00000006643) #20	ENSODEG00000007237 #21	CCNA1 (ENSODEG00000006932) #22	RFXAP (ENSODEG00000010191) #26	ENSODEG00000006771	ALG5 (ENSODEG00000007256) #30	ENSODEG00000009230 #31	ENSODEG00000009776	ENSODEG00000007528 #32	ENSODEG00000019477	POSTN (ENSODEG00000007952) #33	TRPC4 (ENSODEG00000008515) #34	ENSODEG00000006995	ENSODEG00000007195	ENSODEG00000008475	FREM2 (ENSODEG00000007122)	STOML3 (ENSODEG00000007799)
Naked mole-rat female	MODERN SPECIES	2	KL (ENSHGLG00000005334) #12	ENSHGLG00000018786 #13	ENSHGLG00000032772	ENSHGLG00000021355	ENSHGLG00000019417 #15	ENSHGLG00000021428	ENSHGLG00000013996	ENSHGLG00000004608 #16	MAB21L1 (ENSHGLG00000035394) #17	ENSHGLG00000003756 #18	ENSHGLG00000037090	ENSHGLG00000003703	ENSHGLG00000010793 #19	CCDC169 (ENSHGLG00000032864) #20	SPG20 (ENSHGLG00000003791) #21	CCNA1 (ENSHGLG00000002880) #22	SERTM1 (ENSHGLG00000047070) #24	RFXAP (ENSHGLG00000004899) #26	ENSHGLG00000050490	ALG5 (ENSHGLG00000003783) #30	EXOSC8 (ENSHGLG00000002963) #31	SUPT20H (ENSHGLG00000013900) #32	ENSHGLG00000021175	POSTN (ENSHGLG00000000277) #33	TRPC4 (ENSHGLG00000000330) #34	ENSHGLG00000000363	FREM2 (ENSHGLG00000000398)	STOML3 (ENSHGLG00000000438)	PROSER1 (ENSHGLG00000000463)	ENSHGLG00000000513	ENSHGLG00000020548
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.b.b ##32	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b.ib #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00940000170406	ENSGT00390000013549.a.b.b ##32	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Muroidea	ANCESTRAL SPECIES	80										ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Northern American deer mouse	MODERN SPECIES	19	Pfn2 (ENSPEMG00000000065)	Rnf13 (ENSPEMG00000012436)	ENSPEMG00000015451	Commd2 (ENSPEMG00000016801)	ENSPEMG00000012917	Wwtr1 (ENSPEMG00000030962)	Tm4sf4 (ENSPEMG00000000298)	Tm4sf1 (ENSPEMG00000017325)	ENSPEMG00000017734	Mab21l1 (ENSPEMG00000024626) #17	Nbea (ENSPEMG00000016678) #16	Dclk1 (ENSPEMG00000009104) #18	Sohlh2 (ENSPEMG00000012874) #19	Ccdc169 (ENSPEMG00000015894) #20	Spg20 (ENSPEMG00000019106) #21	Ccna1 (ENSPEMG00000000149) #22	Sertm1 (ENSPEMG00000028069) #24	Rfxap (ENSPEMG00000004230) #26	Smad9 (ENSPEMG00000009514)	Alg5 (ENSPEMG00000010516) #30	Exosc8 (ENSPEMG00000010801) #31	ENSPEMG00000030633	Supt20 (ENSPEMG00000017347) #32	Postn (ENSPEMG00000013782) #33	Trpc4 (ENSPEMG00000009383) #34	Ufm1 (ENSPEMG00000012238)	ENSPEMG00000025612	Frem2 (ENSPEMG00000013398)	Stoml3 (ENSPEMG00000016865)	Proser1 (ENSPEMG00000017174)	Nhlrc3 (ENSPEMG00000018137)
Prairie vole	MODERN SPECIES		ENSMOCG00000009927	Pfn2 (ENSMOCG00000017957)	Rnf13 (ENSMOCG00000013187)	Ankub1 (ENSMOCG00000020683)	Commd2 (ENSMOCG00000013752)	Wwtr1 (ENSMOCG00000013258)	Tm4sf4 (ENSMOCG00000010380)	Tm4sf1 (ENSMOCG00000015058)	ENSMOCG00000012733	Mab21l1 (ENSMOCG00000008383) #17	Nbea (ENSMOCG00000014417) #16	Dclk1 (ENSMOCG00000005325) #18	Sohlh2 (ENSMOCG00000018376) #19	Ccdc169 (ENSMOCG00000008131) #20	Spg20 (ENSMOCG00000022133) #21	Ccna1 (ENSMOCG00000004873) #22	Sertm1 (ENSMOCG00000012006) #24	Rfxap (ENSMOCG00000022386) #26	Smad9 (ENSMOCG00000021863)	Alg5 (ENSMOCG00000015400) #30	Exosc8 (ENSMOCG00000017293) #31	ENSMOCG00000021184 #32	Supt20 (ENSMOCG00000020757) #32	Postn (ENSMOCG00000015092) #33	Trpc4 (ENSMOCG00000022081) #34	ENSMOCG00000008401	Ufm1 (ENSMOCG00000001316)	Frem2 (ENSMOCG00000014700)	Stoml3 (ENSMOCG00000009247)	Proser1 (ENSMOCG00000001872)	Nhlrc3 (ENSMOCG00000020191)
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Chinese hamster chok1gshd	MODERN SPECIES	352	Serp1 (ENSCGRG00001012974)	Tsc22d2 (ENSCGRG00001016876)	Pfn2 (ENSCGRG00001018043)	Rnf13 (ENSCGRG00001018992)	Ankub1 (ENSCGRG00001000580)	Commd2 (ENSCGRG00001019990)	Wwtr1 (ENSCGRG00001023807)	Tm4sf4 (ENSCGRG00001005493)	Tm4sf1 (ENSCGRG00001024455)	Nbea (ENSCGRG00001019938) #16	Mab21l1 (ENSCGRG00001011548) #17	Dclk1 (ENSCGRG00001010497) #18	Sohlh2 (ENSCGRG00001022579) #19	Ccdc169 (ENSCGRG00001010072) #20	Spg20 (ENSCGRG00001020099) #21	Ccna1 (ENSCGRG00001015009) #22	Sertm1 (ENSCGRG00001005414) #24	Rfxap (ENSCGRG00001017082) #26	Smad9 (ENSCGRG00001015815)	Alg5 (ENSCGRG00001018711) #30	ENSCGRG00001022326	Exosc8 (ENSCGRG00001012262) #31	Supt20 (ENSCGRG00001018857) #32	Postn (ENSCGRG00001022267) #33	Trpc4 (ENSCGRG00001022303) #34	ENSCGRG00001016565	Ufm1 (ENSCGRG00001021178)	Frem2 (ENSCGRG00001021708)	Stoml3 (ENSCGRG00001010368)	Proser1 (ENSCGRG00001018627)	Nhlrc3 (ENSCGRG00001000190)
Golden Hamster	MODERN SPECIES	690													Sohlh2 (ENSMAUG00000017048) #19	Ccdc169 (ENSMAUG00000015333) #20	Spg20 (ENSMAUG00000011081) #21	Ccna1 (ENSMAUG00000013042) #22	Sertm1 (ENSMAUG00000000354) #24	Rfxap (ENSMAUG00000003109) #26	Smad9 (ENSMAUG00000007977)	ENSMAUG00000013103	Exosc8 (ENSMAUG00000017812) #31	ENSMAUG00000014984	Postn (ENSMAUG00000019919) #33	Trpc4 (ENSMAUG00000001198) #34	Ufm1 (ENSMAUG00000018178)	ENSMAUG00000017869	Frem2 (ENSMAUG00000005257)	Stoml3 (ENSMAUG00000007821)	ENSMAUG00000004106	Nhlrc3 (ENSMAUG00000005924)	Cog6 (ENSMAUG00000000435)
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Mus	ANCESTRAL SPECIES	7	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Mouse	MODERN SPECIES	12	Serp1 (ENSMUSG00000027808)	Tsc22d2 (ENSMUSG00000027806)	Pfn2 (ENSMUSG00000027805)	Rnf13 (ENSMUSG00000036503)	Ankub1 (ENSMUSG00000074591)	Commd2 (ENSMUSG00000036513)	Wwtr1 (ENSMUSG00000027803)	Tm4sf4 (ENSMUSG00000027801)	Tm4sf1 (ENSMUSG00000027800)	Mab21l1 (ENSMUSG00000056947) #17	Nbea (ENSMUSG00000027799) #16	Dclk1 (ENSMUSG00000027797) #18	Sohlh2 (ENSMUSG00000027794) #19	Ccdc169 (ENSMUSG00000048655) #20	Spg20 (ENSMUSG00000036580) #21	Ccna1 (ENSMUSG00000027793) #22	Sertm1 (ENSMUSG00000056306) #24	Rfxap (ENSMUSG00000036615) #26	Smad9 (ENSMUSG00000027796)	Alg5 (ENSMUSG00000036632) #30	Exosc8 (ENSMUSG00000027752) #31	Supt20 (ENSMUSG00000027751) #32	Postn (ENSMUSG00000027750) #33	Trpc4 (ENSMUSG00000027748) #34	Ufm1 (ENSMUSG00000027746)	Gm10985 (ENSMUSG00000078742)	Frem2 (ENSMUSG00000037016)	Stoml3 (ENSMUSG00000027744)	Proser1 (ENSMUSG00000049504)	Nhlrc3 (ENSMUSG00000042997)	Lhfp (ENSMUSG00000048332)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000161729	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942.h	ENSGT00390000007965	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.k #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Steppe mouse	MODERN SPECIES	3328												ENSMSIG00000011150 #18	Sohlh2 (ENSMSIG00000011187) #19	Ccdc169 (ENSMSIG00000011250) #20	ENSMSIG00000011308 #21	Ccna1 (ENSMSIG00000011369) #22	Sertm1 (ENSMSIG00000011391) #24	Rfxap (ENSMSIG00000011399) #26	Smad9 (ENSMSIG00000011407)	Alg5 (ENSMSIG00000011439) #30	Exosc8 (ENSMSIG00000011455) #31	Supt20 (ENSMSIG00000011522) #32	ENSMSIG00000011604	Postn (ENSMSIG00000011621) #33	Trpc4 (ENSMSIG00000011761) #34	Ufm1 (ENSMSIG00000011781)	Gm10985 (ENSMSIG00000011807)	ENSMSIG00000011836	Frem2 (ENSMSIG00000011850)	Stoml3 (ENSMSIG00000011881)	Proser1 (ENSMSIG00000011889)
spretus	MODERN SPECIES	12	Tsc22d2 (MGP_SPRETEiJ_G0025947)	Pfn2 (MGP_SPRETEiJ_G0025946)	Rnf13 (MGP_SPRETEiJ_G0025945)	Ankub1 (MGP_SPRETEiJ_G0025944)	Commd2 (MGP_SPRETEiJ_G0025943)	Wwtr1 (MGP_SPRETEiJ_G0025942)	Tm4sf4 (MGP_SPRETEiJ_G0025941)	Tm4sf1 (MGP_SPRETEiJ_G0025940)	Mab21l1 (MGP_SPRETEiJ_G0025939) #17	Nbea (MGP_SPRETEiJ_G0025938) #16	MGP_SPRETEiJ_G0025937	Dclk1 (MGP_SPRETEiJ_G0025936) #18	Sohlh2 (MGP_SPRETEiJ_G0025935) #19	Ccdc169 (MGP_SPRETEiJ_G0025934) #20	Spg20 (MGP_SPRETEiJ_G0025933) #21	Ccna1 (MGP_SPRETEiJ_G0025932) #22	Sertm1 (MGP_SPRETEiJ_G0025931) #24	Rfxap (MGP_SPRETEiJ_G0025930) #26	Smad9 (MGP_SPRETEiJ_G0025929)	Alg5 (MGP_SPRETEiJ_G0025928) #30	Exosc8 (MGP_SPRETEiJ_G0025927) #31	MGP_SPRETEiJ_G0025926	Supt20 (MGP_SPRETEiJ_G0025925) #32	Postn (MGP_SPRETEiJ_G0025924) #33	Trpc4 (MGP_SPRETEiJ_G0025923) #34	MGP_SPRETEiJ_G0025922	Frem2 (MGP_SPRETEiJ_G0025921)	Stoml3 (MGP_SPRETEiJ_G0025920)	Proser1 (MGP_SPRETEiJ_G0025919)	Nhlrc3 (MGP_SPRETEiJ_G0025918)	Lhfp (MGP_SPRETEiJ_G0025917)
Ryukyu mouse	MODERN SPECIES	12	Siah2 (MGP_CAROLIEiJ_G0025012)	MGP_CAROLIEiJ_G0025011	Selenot (MGP_CAROLIEiJ_G0025010)	Eif2a (MGP_CAROLIEiJ_G0025009)	Serp1 (MGP_CAROLIEiJ_G0025008)	Tsc22d2 (MGP_CAROLIEiJ_G0025007)	Wwtr1 (MGP_CAROLIEiJ_G0025006)	Tm4sf4 (MGP_CAROLIEiJ_G0025005)	Tm4sf1 (MGP_CAROLIEiJ_G0025004)	Mab21l1 (MGP_CAROLIEiJ_G0025003) #17	Nbea (MGP_CAROLIEiJ_G0025002) #16	Dclk1 (MGP_CAROLIEiJ_G0025001) #18	Sohlh2 (MGP_CAROLIEiJ_G0025000) #19	Ccdc169 (MGP_CAROLIEiJ_G0024999) #20	Spg20 (MGP_CAROLIEiJ_G0024998) #21	Ccna1 (MGP_CAROLIEiJ_G0024997) #22	Sertm1 (MGP_CAROLIEiJ_G0024996) #24	Rfxap (MGP_CAROLIEiJ_G0024995) #26	Smad9 (MGP_CAROLIEiJ_G0024994)	Alg5 (MGP_CAROLIEiJ_G0024993) #30	Exosc8 (MGP_CAROLIEiJ_G0024992) #31	MGP_CAROLIEiJ_G0024991	Supt20 (MGP_CAROLIEiJ_G0024990) #32	Postn (MGP_CAROLIEiJ_G0024989) #33	Trpc4 (MGP_CAROLIEiJ_G0024988) #34	MGP_CAROLIEiJ_G0024987	Frem2 (MGP_CAROLIEiJ_G0024986)	Stoml3 (MGP_CAROLIEiJ_G0024985)	Proser1 (MGP_CAROLIEiJ_G0024984)	Nhlrc3 (MGP_CAROLIEiJ_G0024983)	Lhfp (MGP_CAROLIEiJ_G0024982)
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0026455	Eif2a (MGP_PahariEiJ_G0026453)	Serp1 (MGP_PahariEiJ_G0026452)	Tsc22d2 (MGP_PahariEiJ_G0026451)	Pfn2 (MGP_PahariEiJ_G0026450)	Wwtr1 (MGP_PahariEiJ_G0026449)	Tm4sf4 (MGP_PahariEiJ_G0026448)	Tm4sf1 (MGP_PahariEiJ_G0026446)	Mab21l1 (MGP_PahariEiJ_G0026445) #17	Nbea (MGP_PahariEiJ_G0026444) #16	MGP_PahariEiJ_G0026443	Dclk1 (MGP_PahariEiJ_G0026442) #18	Sohlh2 (MGP_PahariEiJ_G0026441) #19	Ccdc169 (MGP_PahariEiJ_G0026440) #20	Spg20 (MGP_PahariEiJ_G0026439) #21	Ccna1 (MGP_PahariEiJ_G0026438) #22	Sertm1 (MGP_PahariEiJ_G0026437) #24	Rfxap (MGP_PahariEiJ_G0026436) #26	Smad9 (MGP_PahariEiJ_G0026435)	Alg5 (MGP_PahariEiJ_G0026434) #30	Exosc8 (MGP_PahariEiJ_G0026433) #31	MGP_PahariEiJ_G0026432	Supt20 (MGP_PahariEiJ_G0026431) #32	Postn (MGP_PahariEiJ_G0026430) #33	Trpc4 (MGP_PahariEiJ_G0026429) #34	Ufm1 (MGP_PahariEiJ_G0026428)	Frem2 (MGP_PahariEiJ_G0026427)	Stoml3 (MGP_PahariEiJ_G0026426)	Proser1 (MGP_PahariEiJ_G0026425)	Nhlrc3 (MGP_PahariEiJ_G0026424)	Lhfp (MGP_PahariEiJ_G0026423)
Rat	MODERN SPECIES	11	Rnf13 (ENSRNOG00000029209)	Ankub1 (ENSRNOG00000070034)	Commd2 (ENSRNOG00000043386)	Rpl12-ps2 (ENSRNOG00000070749)	Wwtr1 (ENSRNOG00000016617)	AC129365.1 (ENSRNOG00000061358)	Tm4sf4 (ENSRNOG00000016437)	Tm4sf1 (ENSRNOG00000015812)	Mab21l1 (ENSRNOG00000032941) #17	Nbea (ENSRNOG00000065312) #16	LOC102552324 (ENSRNOG00000056545)	Dclk1 (ENSRNOG00000032922) #18	Sohlh2 (ENSRNOG00000038091) #19	Ccdc169 (ENSRNOG00000038095) #20	Spart (ENSRNOG00000014155) #21	Ccna1 (ENSRNOG00000014052) #22	Sertm1 (ENSRNOG00000014046) #24	Rfxap (ENSRNOG00000064105) #26	Smad9 (ENSRNOG00000000091)	Alg5 (ENSRNOG00000058694) #30	Exosc8 (ENSRNOG00000051623) #31	Supt20h (ENSRNOG00000059480) #32	Rexo1l1-ps1 (ENSRNOG00000061707)	Dusp14l1 (ENSRNOG00000046368)	Postn (ENSRNOG00000012660) #33	Trpc4 (ENSRNOG00000011133) #34	Frem2 (ENSRNOG00000021670)	Stoml3 (ENSRNOG00000011006)	Proser1 (ENSRNOG00000010980)	Nhlrc3 (ENSRNOG00000010843)	Nhlrc3 (ENSRNOG00000070230)
Upper Galilee mountains blind mole rat	MODERN SPECIES	711									Mab21l1 (ENSNGAG00000001828) #17	Nbea (ENSNGAG00000020626) #16	ENSNGAG00000014771	Dclk1 (ENSNGAG00000013693) #18	Sohlh2 (ENSNGAG00000019687) #19	Ccdc169 (ENSNGAG00000008813) #20	Spg20 (ENSNGAG00000011734) #21	Ccna1 (ENSNGAG00000020244) #22	Sertm1 (ENSNGAG00000018327) #24
Lesser Egyptian jerboa	MODERN SPECIES	73	Cog6 (ENSJJAG00000021458)	Lhfp (ENSJJAG00000014524)	Nhlrc3 (ENSJJAG00000008714)	ENSJJAG00000019833	Stoml3 (ENSJJAG00000014984)	Frem2 (ENSJJAG00000015873)	ENSJJAG00000011258	Trpc4 (ENSJJAG00000002682) #34	Postn (ENSJJAG00000017264) #33	ENSJJAG00000021272	ENSJJAG00000018142 #32	ENSJJAG00000011245 ##32	ENSJJAG00000022752 #31	Alg5 (ENSJJAG00000023125) #30	Smad9 (ENSJJAG00000010404)	Ccna1 (ENSJJAG00000024004) #22	Sertm1 (ENSJJAG00000012642) #24	Spg20 (ENSJJAG00000023993) #21	Ccdc169 (ENSJJAG00000021324) #20	Dclk1 (ENSJJAG00000016300) #18	Mab21l1 (ENSJJAG00000012819) #17	Nbea (ENSJJAG00000016039) #16	ENSJJAG00000020715	Rfc3 (ENSJJAG00000013164) #15	Stard13 (ENSJJAG00000016848) #13	Kl (ENSJJAG00000004906) #12	Pds5b (ENSJJAG00000023181) #11	ENSJJAG00000007334 #9	N4bp2l1 (ENSJJAG00000022228) #7	ENSJJAG00000024080	Zar1l (ENSJJAG00000023916)
Kangaroo rat	MODERN SPECIES	459									Rfc3 (ENSDORG00000009109) #15	ENSDORG00000028484	Mab21l1 (ENSDORG00000023496) #17	Nbea (ENSDORG00000005154) #16	Dclk1 (ENSDORG00000002991) #18	Ccdc169 (ENSDORG00000026608) #20	Spg20 (ENSDORG00000003874) #21	Ccna1 (ENSDORG00000001195) #22	Sertm1 (ENSDORG00000008829) #24	Rfxap (ENSDORG00000002523) #26	Smad9 (ENSDORG00000002526)	Alg5 (ENSDORG00000009002) #30	Exosc8 (ENSDORG00000011062) #31	ENSDORG00000024867 ##32	ENSDORG00000011064 #32	ENSDORG00000030136	Postn (ENSDORG00000009240) #33	Trpc4 (ENSDORG00000009242) #34	Ufm1 (ENSDORG00000024126)	Frem2 (ENSDORG00000002638)	Stoml3 (ENSDORG00000002639)	Proser1 (ENSDORG00000029535)	Nhlrc3 (ENSDORG00000029174)
Lagomorpha	ANCESTRAL SPECIES	111	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32
Pika	MODERN SPECIES	642															ENSOPRG00000004848	ENSOPRG00000004887 #22	RFXAP (ENSOPRG00000004904) #26	ENSOPRG00000004923	ALG5 (ENSOPRG00000004942) #30	EXOSC8 (ENSOPRG00000004966) #31	SUPT20H (ENSOPRG00000004985) #32
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	435	PDS5B (ENSOCUG00000006624) #11	KL (ENSOCUG00000011798) #12	STARD13 (ENSOCUG00000011808) #13	RFC3 (ENSOCUG00000003624) #15	ENSOCUG00000021047	ENSOCUG00000032178	NBEA (ENSOCUG00000017834) #16	MAB21L1 (ENSOCUG00000017845) #17	DCLK1 (ENSOCUG00000017848) #18	ENSOCUG00000039614	SOHLH2 (ENSOCUG00000017853) #19	CCDC169 (ENSOCUG00000026427) #20	SPART (ENSOCUG00000017748) #21	ENSOCUG00000025281 #22	ENSOCUG00000022169	CCNA1 (ENSOCUG00000015876) #22	SERTM1 (ENSOCUG00000012125) #24	RPL18A (ENSOCUG00000024833)	ENSOCUG00000038429	ENSOCUG00000000059	RFXAP (ENSOCUG00000014234) #26	SMAD9 (ENSOCUG00000007453) #27	ALG5 (ENSOCUG00000007458) #30	EXOSC8 (ENSOCUG00000007465) #31	SUPT20H (ENSOCUG00000008436) #32
Rabbit	MODERN SPECIES	435					SUPT20H (ENSOCUG00000008436) #32	EXOSC8 (ENSOCUG00000007465) #31	ALG5 (ENSOCUG00000007458) #30	SMAD9 (ENSOCUG00000007453) #27	RFXAP (ENSOCUG00000014234) #26	ENSOCUG00000000059	ENSOCUG00000038429	RPL18A (ENSOCUG00000024833)	SERTM1 (ENSOCUG00000012125) #24	CCNA1 (ENSOCUG00000015876) #22	ENSOCUG00000022169	ENSOCUG00000025281 #22	SPART (ENSOCUG00000017748) #21	CCDC169 (ENSOCUG00000026427) #20	SOHLH2 (ENSOCUG00000017853) #19	ENSOCUG00000039614	DCLK1 (ENSOCUG00000017848) #18	MAB21L1 (ENSOCUG00000017845) #17	NBEA (ENSOCUG00000017834) #16	ENSOCUG00000032178	ENSOCUG00000021047	RFC3 (ENSOCUG00000003624) #15	STARD13 (ENSOCUG00000011808) #13	KL (ENSOCUG00000011798) #12	PDS5B (ENSOCUG00000006624) #11	ENSOCUG00000008952 #9	BRCA2 (ENSOCUG00000016878)
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000165080	ENSGT00390000017100 #8	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157940 #22
Hedgehog	MODERN SPECIES	2982																CCNA1 (ENSEEUG00000001588) #22
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	2225																ENSSARG00000003464 #22
Common shrew	MODERN SPECIES	7044																ENSSARG00000002757 #22
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00940000165796	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00940000165796	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Camelidae	ANCESTRAL SPECIES	14	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00390000017100 #8	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00940000163092 #27	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Alpaca	MODERN SPECIES	2038											NBEA (ENSVPAG00000007277) #16	MAB21L1 (ENSVPAG00000007278) #17	DCLK1 (ENSVPAG00000007279) #18	SOHLH2 (ENSVPAG00000007281) #19	SPART (ENSVPAG00000007282) #21	CCNA1 (ENSVPAG00000007284) #22	SERTM1 (ENSVPAG00000007285) #24	SMAD9 (ENSVPAG00000007286) #27	EXOSC8 (ENSVPAG00000007287) #31	SUPT20H (ENSVPAG00000007288) #32
Arabian camel	MODERN SPECIES	5	ENSCDRG00005020560	ENSCDRG00005020567 #9	PDS5B (ENSCDRG00005020596) #11	ENSCDRG00005020629	KL (ENSCDRG00005020640) #12	STARD13 (ENSCDRG00005020653) #13	RFC3 (ENSCDRG00005020667) #15	ENSCDRG00005020676	ENSCDRG00005020707 #16	ENSCDRG00005020737 #16	MAB21L1 (ENSCDRG00005020760) #17	DCLK1 (ENSCDRG00005020769) #18	SOHLH2 (ENSCDRG00005020803) #19	CCDC169 (ENSCDRG00005020822) #20	SPART (ENSCDRG00005020836) #21	CCNA1 (ENSCDRG00005020852) #22	RFXAP (ENSCDRG00005020867) #26	ENSCDRG00005020875	ALG5 (ENSCDRG00005020891) #30	EXOSC8 (ENSCDRG00005020927) #31	SUPT20H (ENSCDRG00005020946) #32	POSTN (ENSCDRG00005021040) #33	TRPC4 (ENSCDRG00005021504) #34	UFM1 (ENSCDRG00005021509)	FREM2 (ENSCDRG00005021512)	STOML3 (ENSCDRG00005021519)	PROSER1 (ENSCDRG00005021524)	ENSCDRG00005021530	LHFPL6 (ENSCDRG00005021533)	COG6 (ENSCDRG00005021540)	ENSCDRG00005021551
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Pecora	ANCESTRAL SPECIES	23	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Percora_a	ANCESTRAL SPECIES	25	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Bovidae	ANCESTRAL SPECIES	25	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Caprinae	ANCESTRAL SPECIES	28	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00390000017100 #8	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Rambouillet Sheep	MODERN SPECIES	1	MEDAG (ENSOARG00020009224)	TEX26 (ENSOARG00020009149)	ENSOARG00020008926	HSPH1 (ENSOARG00020008491)	B3GLCT (ENSOARG00020008264)	ENSOARG00020008205	RXFP2 (ENSOARG00020007829)	ENSOARG00020007798	FRY (ENSOARG00020006776)	ENSOARG00020006606 #14	RFC3 (ENSOARG00020006444) #15	MAB21L1 (ENSOARG00020006363) #17	NBEA (ENSOARG00020006253) #16	DCLK1 (ENSOARG00020005882) #18	SPART (ENSOARG00020005778) #21	CCNA1 (ENSOARG00020005736) #22	SERTM1 (ENSOARG00020005720) #24	RFXAP (ENSOARG00020005709) #26	ENSOARG00020005685	ALG5 (ENSOARG00020005611) #30	EXOSC8 (ENSOARG00020005546) #31	POSTN (ENSOARG00020004992) #33	TRPC4 (ENSOARG00020004737) #34	UFM1 (ENSOARG00020004690)	ENSOARG00020004666	FREM2 (ENSOARG00020004570)	STOML3 (ENSOARG00020004511)	PROSER1 (ENSOARG00020004351)	LHFPL6 (ENSOARG00020004280)	COG6 (ENSOARG00020004152)	ENSOARG00020004122
Goat	MODERN SPECIES	3	N4BP2L1 (ENSCHIG00000006314) #7	ENSCHIG00000015346 #8	ENSCHIG00000017364	N4BP2L2 (ENSCHIG00000019989) #9	PDS5B (ENSCHIG00000006844) #11	ENSCHIG00000022651	KL (ENSCHIG00000006250) #12	STARD13 (ENSCHIG00000021532) #13	RFC3 (ENSCHIG00000012709) #15	ENSCHIG00000018724	NBEA (ENSCHIG00000024367) #16	MAB21L1 (ENSCHIG00000011613) #17	DCLK1 (ENSCHIG00000022767) #18	SOHLH2 (ENSCHIG00000013941) #19	SPART (ENSCHIG00000024649) #21	CCNA1 (ENSCHIG00000013870) #22	SERTM1 (ENSCHIG00000006642) #24	RFXAP (ENSCHIG00000007931) #26	SMAD9 (ENSCHIG00000017165) #27	ALG5 (ENSCHIG00000015926) #30	EXOSC8 (ENSCHIG00000008153) #31	SUPT20H (ENSCHIG00000010581) #32	POSTN (ENSCHIG00000008249) #33	TRPC4 (ENSCHIG00000006698) #34	ENSCHIG00000012902	FREM2 (ENSCHIG00000022176)	STOML3 (ENSCHIG00000022805)	PROSER1 (ENSCHIG00000018355)	NHLRC3 (ENSCHIG00000022530)	ENSCHIG00000015682	COG6 (ENSCHIG00000006953)
Bovinae	ANCESTRAL SPECIES	29	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Bos	ANCESTRAL SPECIES	28	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.b.b.a.b.a.b	ENSGT00940000155313	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.b.b	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Bos_a	ANCESTRAL SPECIES	19	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.b.b.a.b.a.b	ENSGT00940000155313	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.b.b	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Wild yak	MODERN SPECIES	1961												ENSBMUG00000013658 #18	SOHLH2 (ENSBMUG00000013688) #19	ENSBMUG00000013709	SPART (ENSBMUG00000013734) #21	CCNA1 (ENSBMUG00000013760) #22	SERTM1 (ENSBMUG00000013784) #24	RFXAP (ENSBMUG00000013796) #26	ENSBMUG00000013808	ENSBMUG00000013828	ALG5 (ENSBMUG00000013883) #30	EXOSC8 (ENSBMUG00000013922) #31	SUPT20H (ENSBMUG00000014015) #32
Domestic yak	MODERN SPECIES	6	PDS5B (ENSBGRG00000015847) #11	KL (ENSBGRG00000016337) #12	ENSBGRG00000016436	STARD13 (ENSBGRG00000016454) #13	ENSBGRG00000016636 #14	RFC3 (ENSBGRG00000016678) #15	NBEA (ENSBGRG00000016974) #16	MAB21L1 (ENSBGRG00000019318) #17	ENSBGRG00000019383	DCLK1 (ENSBGRG00000019462) #18	ENSBGRG00000020054	SOHLH2 (ENSBGRG00000020090) #19	ENSBGRG00000020527	ENSBGRG00000020579	SPART (ENSBGRG00000020610) #21	CCNA1 (ENSBGRG00000020675) #22	RFXAP (ENSBGRG00000020840) #26	ENSBGRG00000020902	ALG5 (ENSBGRG00000020943) #30	EXOSC8 (ENSBGRG00000021155) #31	SUPT20H (ENSBGRG00000021294) #32	ENSBGRG00000021667	POSTN (ENSBGRG00000021859) #33	TRPC4 (ENSBGRG00000024862) #34	UFM1 (ENSBGRG00000024957)	ENSBGRG00000010709	FREM2 (ENSBGRG00000010780)	ENSBGRG00000011171	STOML3 (ENSBGRG00000011207)	PROSER1 (ENSBGRG00000011547)	NHLRC3 (ENSBGRG00000011766)
Bos_b	ANCESTRAL SPECIES	33	ENSGT00940000158948.b	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000008285.j	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.b.b.a.b.a.b	ENSGT00940000155313	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.b.b	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Cow	MODERN SPECIES	3	BRCA2 (ENSBTAG00000000988)	N4BP2L1 (ENSBTAG00000000993) #7	N4BP2L2 (ENSBTAG00000023279) #9	PDS5B (ENSBTAG00000011597) #11	ENSBTAG00000052447	ENSBTAG00000052284	KL (ENSBTAG00000013984) #12	STARD13 (ENSBTAG00000021815) #13	RFC3 (ENSBTAG00000010787) #15	MAB21L1 (ENSBTAG00000034069) #17	NBEA (ENSBTAG00000022991) #16	DCLK1 (ENSBTAG00000038495) #18	ENSBTAG00000053984 #18	SOHLH2 (ENSBTAG00000018955) #19	SPART (ENSBTAG00000008040) #21	CCNA1 (ENSBTAG00000007284) #22	SERTM1 (ENSBTAG00000051461) #24	RFXAP (ENSBTAG00000005351) #26	SMAD9 (ENSBTAG00000007589)	ALG5 (ENSBTAG00000011850) #30	EXOSC8 (ENSBTAG00000011855) #31	ENSBTAG00000051948	SUPT20H (ENSBTAG00000011860) #32	POSTN (ENSBTAG00000012409) #33	TRPC4 (ENSBTAG00000009405) #34	UFM1 (ENSBTAG00000051486)	ENSBTAG00000053045	FREM2 (ENSBTAG00000017032)	STOML3 (ENSBTAG00000018232)	PROSER1 (ENSBTAG00000010949)	NHLRC3 (ENSBTAG00000010951)
Hybrid Bos Indicus	MODERN SPECIES	3	N4BP2L1 (ENSBIXG00005016371) #7	ENSBIXG00005016425	ENSBIXG00005016449	PDS5B (ENSBIXG00005016492) #11	KL (ENSBIXG00005016521) #12	STARD13 (ENSBIXG00005016583) #13	ENSBIXG00005016616	RFC3 (ENSBIXG00005016653) #15	ENSBIXG00005016721	MAB21L1 (ENSBIXG00005016746) #17	NBEA (ENSBIXG00005017683) #16	ENSBIXG00005017759	DCLK1 (ENSBIXG00005017854) #18	ENSBIXG00005017887	SOHLH2 (ENSBIXG00005017929) #19	CCNA1 (ENSBIXG00005017970) #22	SPART (ENSBIXG00005018031) #21	RFXAP (ENSBIXG00005018065) #26	ENSBIXG00005018112	ALG5 (ENSBIXG00005018155) #30	EXOSC8 (ENSBIXG00005018177) #31	ENSBIXG00005018186	SUPT20H (ENSBIXG00005018291) #32	POSTN (ENSBIXG00005018541) #33	TRPC4 (ENSBIXG00005018763) #34	ENSBIXG00005018822	ENSBIXG00005018830	FREM2 (ENSBIXG00005003071)	ENSBIXG00005003074	STOML3 (ENSBIXG00005018930)	PROSER1 (ENSBIXG00005018975)
American bison	MODERN SPECIES	2985										MAB21L1 (ENSBBBG00000017552) #17	ENSBBBG00000004343 #16	DCLK1 (ENSBBBG00000017463) #18	SOHLH2 (ENSBBBG00000004276) #19	ENSBBBG00000004270	SPART (ENSBBBG00000017217) #21	CCNA1 (ENSBBBG00000017172) #22	SERTM1 (ENSBBBG00000017151) #24	RFXAP (ENSBBBG00000017143) #26	ENSBBBG00000006772	ENSBBBG00000004225	ALG5 (ENSBBBG00000016982) #30	EXOSC8 (ENSBBBG00000016935) #31	SUPT20H (ENSBBBG00000004177) #32	POSTN (ENSBBBG00000016719) #33	TRPC4 (ENSBBBG00000016297) #34	UFM1 (ENSBBBG00000003998)	FREM2 (ENSBBBG00000006995)	STOML3 (ENSBBBG00000016045)	PROSER1 (ENSBBBG00000003983)	ENSBBBG00000008160	LHFPL6 (ENSBBBG00000015946)
Siberian musk deer	MODERN SPECIES	18	BRCA2 (ENSMMSG00000000412)	N4BP2L1 (ENSMMSG00000000325) #7	ENSMMSG00000000248 #9	ENSMMSG00000000223	PDS5B (ENSMMSG00000000057) #11	KL (ENSMMSG00000000017) #12	STARD13 (ENSMMSG00000000004) #13	ENSMMSG00000020637 #14	RFC3 (ENSMMSG00000020587) #15	MAB21L1 (ENSMMSG00000020535) #17	NBEA (ENSMMSG00000018865) #16	DCLK1 (ENSMMSG00000018433) #18	ENSMMSG00000018394	SOHLH2 (ENSMMSG00000018312) #19	SPART (ENSMMSG00000018271) #21	CCNA1 (ENSMMSG00000018218) #22	SERTM1 (ENSMMSG00000018207) #24	RFXAP (ENSMMSG00000018161) #26	ENSMMSG00000018132	ALG5 (ENSMMSG00000018026) #30	EXOSC8 (ENSMMSG00000017924) #31	SUPT20H (ENSMMSG00000017640) #32	POSTN (ENSMMSG00000017250) #33	TRPC4 (ENSMMSG00000016043) #34	UFM1 (ENSMMSG00000015957)	FREM2 (ENSMMSG00000015834)	STOML3 (ENSMMSG00000015774)	PROSER1 (ENSMMSG00000015732)	NHLRC3 (ENSMMSG00000015702)	LHFPL6 (ENSMMSG00000015686)	ENSMMSG00000015673
Yarkand deer	MODERN SPECIES	23	N4BP2L1 (ENSCHYG00000026388) #7	ENSCHYG00000026356 #9	ENSCHYG00000026345	PDS5B (ENSCHYG00000026234) #11	ENSCHYG00000026212 #12	STARD13 (ENSCHYG00000026131) #13	RFC3 (ENSCHYG00000026097) #15	ENSCHYG00000026087	MAB21L1 (ENSCHYG00000026080) #17	ENSCHYG00000026070	NBEA (ENSCHYG00000025971) #16	DCLK1 (ENSCHYG00000025739) #18	SOHLH2 (ENSCHYG00000025680) #19	ENSCHYG00000025657	SPART (ENSCHYG00000025606) #21	CCNA1 (ENSCHYG00000025576) #22	RFXAP (ENSCHYG00000025529) #26	ENSCHYG00000025491	ALG5 (ENSCHYG00000025427) #30	EXOSC8 (ENSCHYG00000025344) #31	SUPT20H (ENSCHYG00000025167) #32	ENSCHYG00000025141	POSTN (ENSCHYG00000021562) #33	TRPC4 (ENSCHYG00000021096) #34	UFM1 (ENSCHYG00000020980)	FREM2 (ENSCHYG00000020851)	STOML3 (ENSCHYG00000020627)	PROSER1 (ENSCHYG00000020171)	NHLRC3 (ENSCHYG00000020056)	LHFPL6 (ENSCHYG00000019946)	COG6 (ENSCHYG00000019685)
Cetacea	ANCESTRAL SPECIES	20	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000160240.e.b	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000160240.e.b	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00940000165080	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000160240.e.b	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B.g #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00940000165080	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000160240.e.b	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B.g #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000161564 #7	ENSGT00900000143638	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000160240.f	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00940000165796.a	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B.g #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Narwhal	MODERN SPECIES	315	N4BP2L1 (ENSMMNG00015019137) #7	ENSMMNG00015019024 #9	PDS5B (ENSMMNG00015018806) #11	KL (ENSMMNG00015018718) #12	STARD13 (ENSMMNG00015018643) #13	ENSMMNG00015018614	RFC3 (ENSMMNG00015018576) #15	MAB21L1 (ENSMMNG00015018533) #17	NBEA (ENSMMNG00015017286) #16	ENSMMNG00015017020	DCLK1 (ENSMMNG00015016839) #18	SOHLH2 (ENSMMNG00015016766) #19	ENSMMNG00015016716	ENSMMNG00015016688	SPART (ENSMMNG00015016660) #21	CCNA1 (ENSMMNG00015016619) #22	SERTM1 (ENSMMNG00015016606) #24	RFXAP (ENSMMNG00015016575) #26	SMAD9 (ENSMMNG00015016517) #27	ALG5 (ENSMMNG00015016441) #30	EXOSC8 (ENSMMNG00015016390) #31	SUPT20H (ENSMMNG00015016304) #32	POSTN (ENSMMNG00015016035) #33	TRPC4 (ENSMMNG00015018230) #34	UFM1 (ENSMMNG00015018153)	FREM2 (ENSMMNG00015018093)	ENSMMNG00015018061	PROSER1 (ENSMMNG00015018028)	NHLRC3 (ENSMMNG00015017998)	LHFPL6 (ENSMMNG00015017969)	COG6 (ENSMMNG00015017929)
Beluga whale	MODERN SPECIES	29	BRCA2 (ENSDLEG00000008330)	N4BP2L1 (ENSDLEG00000008631) #7	ENSDLEG00000008674	N4BP2L2 (ENSDLEG00000008685) #9	PDS5B (ENSDLEG00000008737) #11	KL (ENSDLEG00000008992) #12	STARD13 (ENSDLEG00000009047) #13	RFC3 (ENSDLEG00000009132) #15	NBEA (ENSDLEG00000009669) #16	MAB21L1 (ENSDLEG00000015125) #17	ENSDLEG00000015130	DCLK1 (ENSDLEG00000015178) #18	SOHLH2 (ENSDLEG00000015732) #19	ENSDLEG00000015775	SPART (ENSDLEG00000015795) #21	CCNA1 (ENSDLEG00000015815) #22	SERTM1 (ENSDLEG00000015847) #24	RFXAP (ENSDLEG00000015852) #26	SMAD9 (ENSDLEG00000015856)	ALG5 (ENSDLEG00000015871) #30	ENSDLEG00000015937 #31	ENSDLEG00000015974 #32	ENSDLEG00000016247 #31	ENSDLEG00000016296 #32	ENSDLEG00000016480	POSTN (ENSDLEG00000016500) #33	ENSDLEG00000016640 #34	ENSDLEG00000016650 #34	UFM1 (ENSDLEG00000016661)	FREM2 (ENSDLEG00000016680)	STOML3 (ENSDLEG00000016712)
Vaquita	MODERN SPECIES	9	PDS5B (ENSPSNG00000016496) #11	KL (ENSPSNG00000016647) #12	STARD13 (ENSPSNG00000016716) #13	ENSPSNG00000016910 #14	ENSPSNG00000016949	RFC3 (ENSPSNG00000016968) #15	ENSPSNG00000016994	NBEA (ENSPSNG00000017103) #16	MAB21L1 (ENSPSNG00000019146) #17	ENSPSNG00000019171	DCLK1 (ENSPSNG00000019311) #18	SOHLH2 (ENSPSNG00000019614) #19	ENSPSNG00000019728	ENSPSNG00000019782	SPART (ENSPSNG00000019827) #21	CCNA1 (ENSPSNG00000019923) #22	SERTM1 (ENSPSNG00000019993) #24	RFXAP (ENSPSNG00000020019) #26	ENSPSNG00000020054	ALG5 (ENSPSNG00000020102) #30	EXOSC8 (ENSPSNG00000020154) #31	SUPT20H (ENSPSNG00000020214) #32	POSTN (ENSPSNG00000020633) #33	TRPC4 (ENSPSNG00000021533) #34	UFM1 (ENSPSNG00000021719)	FREM2 (ENSPSNG00000021743)	STOML3 (ENSPSNG00000021808)	ENSPSNG00000021898	NHLRC3 (ENSPSNG00000021926)	LHFPL6 (ENSPSNG00000021956)	ENSPSNG00000021974
Dolphin	MODERN SPECIES	348															SPART (ENSTTRG00000003853) #21	CCNA1 (ENSTTRG00000003874) #22	SERTM1 (ENSTTRG00000003886) #24
Sperm whale	MODERN SPECIES	4	ZAR1L (ENSPCTG00005017620)	BRCA2 (ENSPCTG00005017664)	N4BP2L1 (ENSPCTG00005017787) #7	N4BP2L2 (ENSPCTG00005017951) #9	PDS5B (ENSPCTG00005018127) #11	KL (ENSPCTG00005018349) #12	STARD13 (ENSPCTG00005018420) #13	ENSPCTG00005018498 #14	RFC3 (ENSPCTG00005018543) #15	NBEA (ENSPCTG00005018736) #16	MAB21L1 (ENSPCTG00005020567) #17	ENSPCTG00005020579	DCLK1 (ENSPCTG00005020623) #18	SOHLH2 (ENSPCTG00005020869) #19	SPART (ENSPCTG00005020996) #21	CCNA1 (ENSPCTG00005021014) #22	SERTM1 (ENSPCTG00005008777) #24	ENSPCTG00005008811 #26	SMAD9 (ENSPCTG00005008843) #27	ALG5 (ENSPCTG00005008911) #30	EXOSC8 (ENSPCTG00005009044) #31	SUPT20H (ENSPCTG00005009217) #32	POSTN (ENSPCTG00005009717) #33	TRPC4 (ENSPCTG00005011785) #34	UFM1 (ENSPCTG00005012253)	FREM2 (ENSPCTG00005012294)	ENSPCTG00005012561	ENSPCTG00005012654	PROSER1 (ENSPCTG00005012718)	ENSPCTG00005012885	ENSPCTG00005012920
Blue whale	MODERN SPECIES	9	BRCA2 (ENSBMSG00010017357)	N4BP2L1 (ENSBMSG00010017398) #7	N4BP2L2 (ENSBMSG00010017489) #9	PDS5B (ENSBMSG00010017541) #11	KL (ENSBMSG00010017573) #12	STARD13 (ENSBMSG00010017641) #13	ENSBMSG00010017856 #14	RFC3 (ENSBMSG00010017887) #15	NBEA (ENSBMSG00010018002) #16	MAB21L1 (ENSBMSG00010019155) #17	ENSBMSG00010019170	DCLK1 (ENSBMSG00010019247) #18	SOHLH2 (ENSBMSG00010019390) #19	CCDC169 (ENSBMSG00010019433) #20	SPART (ENSBMSG00010019481) #21	CCNA1 (ENSBMSG00010019518) #22	SERTM1 (ENSBMSG00010019566) #24	ENSBMSG00010019579 #26	ENSBMSG00010019599	ENSBMSG00010019616	ALG5 (ENSBMSG00010019652) #30	EXOSC8 (ENSBMSG00010019693) #31	SUPT20H (ENSBMSG00010019736) #32	POSTN (ENSBMSG00010019838) #33	TRPC4 (ENSBMSG00010019901) #34	ENSBMSG00010019922	FREM2 (ENSBMSG00010019940)	STOML3 (ENSBMSG00010019959)	ENSBMSG00010019993	ENSBMSG00010020008	NHLRC3 (ENSBMSG00010020023)
Suina	ANCESTRAL SPECIES	29	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Chacoan peccary	MODERN SPECIES	216	FRY (ENSCWAG00000012346)	ZAR1L (ENSCWAG00000012109)	BRCA2 (ENSCWAG00000011814)	N4BP2L1 (ENSCWAG00000011599) #7	ENSCWAG00000011334 #9	PDS5B (ENSCWAG00000011260) #11	KL (ENSCWAG00000011188) #12	STARD13 (ENSCWAG00000011055) #13	RFC3 (ENSCWAG00000010993) #15	MAB21L1 (ENSCWAG00000010979) #17	NBEA (ENSCWAG00000009430) #16	DCLK1 (ENSCWAG00000008946) #18	SOHLH2 (ENSCWAG00000008782) #19	CCDC169 (ENSCWAG00000008667) #20	SPART (ENSCWAG00000008593) #21	CCNA1 (ENSCWAG00000008505) #22	SERTM1 (ENSCWAG00000008483) #24	RFXAP (ENSCWAG00000008462) #26	SMAD9 (ENSCWAG00000008375) #27	ALG5 (ENSCWAG00000008270) #30	EXOSC8 (ENSCWAG00000008107) #31	SUPT20H (ENSCWAG00000008003) #32	POSTN (ENSCWAG00000005445) #33	TRPC4 (ENSCWAG00000004878) #34	UFM1 (ENSCWAG00000004818)	FREM2 (ENSCWAG00000005838)	STOML3 (ENSCWAG00000005710)	PROSER1 (ENSCWAG00000005621)	NHLRC3 (ENSCWAG00000005588)	LHFPL6 (ENSCWAG00000005573)	COG6 (ENSCWAG00000005518)
Pig	MODERN SPECIES	2	PDS5B (ENSSSCG00000009345) #11	ENSSSCG00000009347 #12	ENSSSCG00000009348 #13	ENSSSCG00000046579 ##13	ENSSSCG00000041722 #14	RFC3 (ENSSSCG00000009349) #15	ENSSSCG00000042357	NBEA (ENSSSCG00000034348) #16	ENSSSCG00000051344	ENSSSCG00000046978	MAB21L1 (ENSSSCG00000009351) #17	DCLK1 (ENSSSCG00000033919) #18	SOHLH2 (ENSSSCG00000026164) #19	ENSSSCG00000026564 #20	SPART (ENSSSCG00000024635) #21	CCNA1 (ENSSSCG00000009354) #22	SERTM1 (ENSSSCG00000040557) #24	SMAD9 (ENSSSCG00000009357) #27	ALG5 (ENSSSCG00000009360) #30	EXOSC8 (ENSSSCG00000009358) #31	SUPT20H (ENSSSCG00000009359) #32	POSTN (ENSSSCG00000009361) #33	TRPC4 (ENSSSCG00000009362) #34	ENSSSCG00000045003	UFM1 (ENSSSCG00000056668)	FREM2 (ENSSSCG00000009364)	STOML3 (ENSSSCG00000058949)	ENSSSCG00000043789	PROSER1 (ENSSSCG00000040697)	NHLRC3 (ENSSSCG00000037746)	LHFPL6 (ENSSSCG00000029855)
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Carnivora	ANCESTRAL SPECIES	23	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Caniformia	ANCESTRAL SPECIES	24	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Ursidae	ANCESTRAL SPECIES	27	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Ursus	ANCESTRAL SPECIES	57	ENSGT00940000158948.b	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257.g #11	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT01030000235240	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313
American black bear	MODERN SPECIES	2204															SPART (ENSUAMG00000002558) #21	CCNA1 (ENSUAMG00000002583) #22	SERTM1 (ENSUAMG00000002610) #24	RFXAP (ENSUAMG00000002617) #26
Polar bear	MODERN SPECIES	177	RXFP2 (ENSUMAG00000017860)	FRY (ENSUMAG00000018759)	ZAR1L (ENSUMAG00000022330)	BRCA2 (ENSUMAG00000022337)	N4BP2L1 (ENSUMAG00000022350) #7	ENSUMAG00000022353 #9	PDS5B (ENSUMAG00000022566) #11	STARD13 (ENSUMAG00000023689) #13	RFC3 (ENSUMAG00000023694) #15	NBEA (ENSUMAG00000023770) #16	MAB21L1 (ENSUMAG00000023964) #17	DCLK1 (ENSUMAG00000023979) #18	SOHLH2 (ENSUMAG00000024002) #19	ENSUMAG00000024004	SPART (ENSUMAG00000024006) #21	CCNA1 (ENSUMAG00000024007) #22	SERTM1 (ENSUMAG00000024009) #24	RFXAP (ENSUMAG00000024011) #26	ENSUMAG00000024013	ALG5 (ENSUMAG00000024019) #30	EXOSC8 (ENSUMAG00000024024) #31	SUPT20H (ENSUMAG00000024036) #32	POSTN (ENSUMAG00000024227) #33	TRPC4 (ENSUMAG00000024239) #34	UFM1 (ENSUMAG00000024250)	FREM2 (ENSUMAG00000024252)
Giant Panda	MODERN SPECIES	17	FRY (ENSAMEG00000008571)	ZAR1L (ENSAMEG00000009439)	BRCA2 (ENSAMEG00000009390)	N4BP2L1 (ENSAMEG00000009383) #7	ENSAMEG00000009371 #9	PDS5B (ENSAMEG00000009348) #11	KL (ENSAMEG00000009338) #12	STARD13 (ENSAMEG00000009261) #13	RFC3 (ENSAMEG00000009236) #15	NBEA (ENSAMEG00000004658) #16	MAB21L1 (ENSAMEG00000027355) #17	DCLK1 (ENSAMEG00000004633) #18	SOHLH2 (ENSAMEG00000004619) #19	ENSAMEG00000028652 #20	SPART (ENSAMEG00000010291) #21	CCNA1 (ENSAMEG00000010312) #22	SERTM1 (ENSAMEG00000019007) #24	RFXAP (ENSAMEG00000014436) #26	SMAD9 (ENSAMEG00000014442) #27	ALG5 (ENSAMEG00000015763) #30	EXOSC8 (ENSAMEG00000015762) #31	SUPT20H (ENSAMEG00000015705) #32	POSTN (ENSAMEG00000000126) #33	TRPC4 (ENSAMEG00000000136) #34	UFM1 (ENSAMEG00000005616)	FREM2 (ENSAMEG00000016273)	STOML3 (ENSAMEG00000016264)	PROSER1 (ENSAMEG00000016253)	NHLRC3 (ENSAMEG00000016244)	LHFPL6 (ENSAMEG00000012870)	COG6 (ENSAMEG00000012873)
Mustelinae	ANCESTRAL SPECIES	109	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32
American mink	MODERN SPECIES	130	ZAR1L (ENSNVIG00000021062)	BRCA2 (ENSNVIG00000021091)	N4BP2L1 (ENSNVIG00000021457) #7	ENSNVIG00000021498 #9	PDS5B (ENSNVIG00000021528) #11	ENSNVIG00000021539	KL (ENSNVIG00000021542) #12	STARD13 (ENSNVIG00000021560) #13	RFC3 (ENSNVIG00000021629) #15	NBEA (ENSNVIG00000021664) #16	MAB21L1 (ENSNVIG00000021851) #17	DCLK1 (ENSNVIG00000021862) #18	SOHLH2 (ENSNVIG00000021960) #19	ENSNVIG00000021999 #20	SPART (ENSNVIG00000022027) #21	CCNA1 (ENSNVIG00000022098) #22	SRTM1 (ENSNVIG00000022113) #24	RFXAP (ENSNVIG00000022117) #26	ENSNVIG00000022132	ALG5 (ENSNVIG00000022149) #30	ENSNVIG00000022198 #31	SUPT20H (ENSNVIG00000022210) #32
Ferret	MODERN SPECIES	319	ENSMPUG00000001973	ENSMPUG00000001969	ZAR1L (ENSMPUG00000001948)	BRCA2 (ENSMPUG00000001945)	N4BP2L1 (ENSMPUG00000001937) #7	N4BP2L2 (ENSMPUG00000001920) #9	PDS5B (ENSMPUG00000001906) #11	KL (ENSMPUG00000001895) #12	STARD13 (ENSMPUG00000001890) #13	RFC3 (ENSMPUG00000001885) #15	MAB21L1 (ENSMPUG00000018771) #17	NBEA (ENSMPUG00000001876) #16	DCLK1 (ENSMPUG00000001856) #18	ENSMPUG00000001851	SPART (ENSMPUG00000001848) #21	CCNA1 (ENSMPUG00000001844) #22	RFXAP (ENSMPUG00000001841) #26	ENSMPUG00000001838	ALG5 (ENSMPUG00000001836) #30	EXOSC8 (ENSMPUG00000001833) #31	SUPT20H (ENSMPUG00000001828) #32
Canidae	ANCESTRAL SPECIES	31	ENSGT00610000086058.b	ENSGT00390000012305.b.h	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT01030000235240.b.b	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000153305.d.cb.b.a	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT01050000248407	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT01030000235240.b.b	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Dingo	MODERN SPECIES	304	PDS5B (ENSCAFG00020021916) #11	KL (ENSCAFG00020021757) #12	STARD13 (ENSCAFG00020021742) #13	RFC3 (ENSCAFG00020021731) #15	ENSCAFG00020021726	ENSCAFG00020021720	ENSCAFG00020021715	MAB21L1 (ENSCAFG00020021712) #17	NBEA (ENSCAFG00020021598) #16	ENSCAFG00020021582	ENSCAFG00020021550 #18	ENSCAFG00020021539 #18	SOHLH2 (ENSCAFG00020021531) #19	ENSCAFG00020021530	SPART (ENSCAFG00020021529) #21	CCNA1 (ENSCAFG00020021526) #22	SERTM1 (ENSCAFG00020021524) #24	RFXAP (ENSCAFG00020021520) #26	SMAD9 (ENSCAFG00020021500) #27	ALG5 (ENSCAFG00020021490) #30	EXOSC8 (ENSCAFG00020021481) #31	SUPT20H (ENSCAFG00020021472) #32	POSTN (ENSCAFG00020021451) #33	TRPC4 (ENSCAFG00020021443) #34	UFM1 (ENSCAFG00020021431)	FREM2 (ENSCAFG00020021340)	STOML3 (ENSCAFG00020021328)	PROSER1 (ENSCAFG00020021312)	NHLRC3 (ENSCAFG00020021307)	ENSCAFG00020021297	COG6 (ENSCAFG00020021284)
Dog	MODERN SPECIES	17	KL (ENSCAFG00845014839) #12	ENSCAFG00845029592	STARD13 (ENSCAFG00845029481) #13	RFC3 (ENSCAFG00845029383) #15	ENSCAFG00845029351	ENSCAFG00845029319	ENSCAFG00845029282	ENSCAFG00845029222 #16	MAB21L1 (ENSCAFG00845029178) #17	ENSCAFG00845029106 #16	ENSCAFG00845029079	DCLK1 (ENSCAFG00845028832) #18	SOHLH2 (ENSCAFG00845028635) #19	ENSCAFG00845028600	SPART (ENSCAFG00845028535) #21	CCNA1 (ENSCAFG00845028457) #22	SERTM1 (ENSCAFG00845028427) #24	ENSCAFG00845028399 #26	SMAD9 (ENSCAFG00845028322) #27	ALG5 (ENSCAFG00845028248) #30	EXOSC8 (ENSCAFG00845028126) #31	SUPT20H (ENSCAFG00845027530) #32	POSTN (ENSCAFG00845026785) #33	TRPC4 (ENSCAFG00845026366) #34	ENSCAFG00845025887	ENSCAFG00845025825	FREM2 (ENSCAFG00845025571)	STOML3 (ENSCAFG00845025505)	PROSER1 (ENSCAFG00845025072)	NHLRC3 (ENSCAFG00845024753)	LHFPL6 (ENSCAFG00845024644)
Red fox	MODERN SPECIES	22	PDS5B (ENSVVUG00000026481) #11	ENSVVUG00000026513 #12	STARD13 (ENSVVUG00000026517) #13	ENSVVUG00000026530	RFC3 (ENSVVUG00000026536) #15	ENSVVUG00000026551	NBEA (ENSVVUG00000026559) #16	MAB21L1 (ENSVVUG00000026598) #17	DCLK1 (ENSVVUG00000026606) #18	ENSVVUG00000026611 #18	ENSVVUG00000026614	SOHLH2 (ENSVVUG00000026616) #19	ENSVVUG00000026623	SPART (ENSVVUG00000026627) #21	ENSVVUG00000026631	CCNA1 (ENSVVUG00000026633) #22	SERTM1 (ENSVVUG00000026638) #24	RFXAP (ENSVVUG00000026640) #26	SMAD9 (ENSVVUG00000026647) #27	ALG5 (ENSVVUG00000026656) #30	EXOSC8 (ENSVVUG00000026660) #31	SUPT20H (ENSVVUG00000026663) #32	ENSVVUG00000026684	ENSVVUG00000026687	POSTN (ENSVVUG00000026694) #33	TRPC4 (ENSVVUG00000026705) #34	UFM1 (ENSVVUG00000026710)	FREM2 (ENSVVUG00000026715)	STOML3 (ENSVVUG00000026721)	ENSVVUG00000026722	ENSVVUG00000026726
Felidae	ANCESTRAL SPECIES	23	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Panthera	ANCESTRAL SPECIES	21	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00390000000153.l.a.eb	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B.e #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Tiger	MODERN SPECIES	575	ZAR1L (ENSPTIG00000019337)	BRCA2 (ENSPTIG00000019877)	N4BP2L1 (ENSPTIG00000005966) #7	ENSPTIG00000006468	PDS5B (ENSPTIG00000008970) #11	KL (ENSPTIG00000010752) #12	STARD13 (ENSPTIG00000011429) #13	ENSPTIG00000006535	RFC3 (ENSPTIG00000014926) #15	NBEA (ENSPTIG00000016213) #16	MAB21L1 (ENSPTIG00000006981) #17	DCLK1 (ENSPTIG00000006786) #18	SOHLH2 (ENSPTIG00000011713) #19	CCDC169 (ENSPTIG00000013273) #20	SPART (ENSPTIG00000014543) #21	CCNA1 (ENSPTIG00000016566) #22	SERTM1 (ENSPTIG00000007212) #24	RFXAP (ENSPTIG00000019110) #26	SMAD9 (ENSPTIG00000019770) #27	ALG5 (ENSPTIG00000021365) #30	EXOSC8 (ENSPTIG00000001519) #31	SUPT20H (ENSPTIG00000005009) #32	POSTN (ENSPTIG00000012916) #33	TRPC4 (ENSPTIG00000006082) #34	UFM1 (ENSPTIG00000014972)	FREM2 (ENSPTIG00000015761)	STOML3 (ENSPTIG00000018072)	PROSER1 (ENSPTIG00000018892)	NHLRC3 (ENSPTIG00000003346)	LHFPL6 (ENSPTIG00000007526)	COG6 (ENSPTIG00000008178)
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00390000000153.l.a.eb	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092.d #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B.e #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
leopard	MODERN SPECIES	14	N4BP2L1 (ENSPPRG00000003588) #7	ENSPPRG00000005680	PDS5B (ENSPPRG00000007173) #11	KL (ENSPPRG00000007871) #12	STARD13 (ENSPPRG00000009880) #13	ENSPPRG00000010228 #14	ENSPPRG00000019306	RFC3 (ENSPPRG00000012243) #15	ENSPPRG00000012792	MAB21L1 (ENSPPRG00000019406) #17	NBEA (ENSPPRG00000009931) #16	DCLK1 (ENSPPRG00000012929) #18	SOHLH2 (ENSPPRG00000013677) #19	ENSPPRG00000014636 #20	SPART (ENSPPRG00000015043) #21	CCNA1 (ENSPPRG00000020968) #22	SERTM1 (ENSPPRG00000020331) #24	RFXAP (ENSPPRG00000022543) #26	SMAD9 (ENSPPRG00000024072) #27	ALG5 (ENSPPRG00000023154) #30	ENSPPRG00000022901 #31	SUPT20H (ENSPPRG00000001254) #32	POSTN (ENSPPRG00000003707) #33	TRPC4 (ENSPPRG00000009468) #34	UFM1 (ENSPPRG00000010176)	FREM2 (ENSPPRG00000010431)	STOML3 (ENSPPRG00000011528)	PROSER1 (ENSPPRG00000013317)	NHLRC3 (ENSPPRG00000014332)	LHFPL6 (ENSPPRG00000014864)	COG6 (ENSPPRG00000020939)
lion	MODERN SPECIES	1	BRCA2 (ENSPLOG00000015753)	N4BP2L1 (ENSPLOG00000015653) #7	ENSPLOG00000015391 #9	PDS5B (ENSPLOG00000015236) #11	KL (ENSPLOG00000015127) #12	STARD13 (ENSPLOG00000014955) #13	ENSPLOG00000014897	RFC3 (ENSPLOG00000014843) #15	ENSPLOG00000014761	MAB21L1 (ENSPLOG00000014741) #17	NBEA (ENSPLOG00000012350) #16	DCLK1 (ENSPLOG00000011437) #18	SOHLH2 (ENSPLOG00000011211) #19	ENSPLOG00000011079 #20	SPART (ENSPLOG00000011034) #21	CCNA1 (ENSPLOG00000010975) #22	SERTM1 (ENSPLOG00000010957) #24	RFXAP (ENSPLOG00000010917) #26	SMAD9 (ENSPLOG00000010831) #27	ALG5 (ENSPLOG00000010734) #30	EXOSC8 (ENSPLOG00000010639) #31	SUPT20H (ENSPLOG00000010394) #32	POSTN (ENSPLOG00000009465) #33	TRPC4 (ENSPLOG00000008639) #34	UFM1 (ENSPLOG00000008420)	FREM2 (ENSPLOG00000008297)	STOML3 (ENSPLOG00000008241)	PROSER1 (ENSPLOG00000008102)	NHLRC3 (ENSPLOG00000007982)	LHFPL6 (ENSPLOG00000007943)	COG6 (ENSPLOG00000007844)
Cat	MODERN SPECIES		ZAR1L (ENSFCAG00000032767)	BRCA2 (ENSFCAG00000025587)	N4BP2L1 (ENSFCAG00000042275) #7	ENSFCAG00000022569 #9	PDS5B (ENSFCAG00000018200) #11	KL (ENSFCAG00000013985) #12	STARD13 (ENSFCAG00000013986) #13	RFC3 (ENSFCAG00000025285) #15	NBEA (ENSFCAG00000031022) #16	ENSFCAG00000024005	MAB21L1 (ENSFCAG00000026068) #17	DCLK1 (ENSFCAG00000004159) #18	SOHLH2 (ENSFCAG00000004161) #19	ENSFCAG00000045901 #20	SPART (ENSFCAG00000026657) #21	CCNA1 (ENSFCAG00000004642) #22	SERTM1 (ENSFCAG00000028471) #24	RFXAP (ENSFCAG00000027454) #26	SMAD9 (ENSFCAG00000003813)	ALG5 (ENSFCAG00000003814) #30	EXOSC8 (ENSFCAG00000003815) #31	SUPT20H (ENSFCAG00000003816) #32	POSTN (ENSFCAG00000019190) #33	TRPC4 (ENSFCAG00000006058) #34	UFM1 (ENSFCAG00000037650)	FREM2 (ENSFCAG00000007720)	STOML3 (ENSFCAG00000007723)	PROSER1 (ENSFCAG00000046363)	NHLRC3 (ENSFCAG00000007724)	LHFPL6 (ENSFCAG00000039800)	COG6 (ENSFCAG00000026918)
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Chiroptera	ANCESTRAL SPECIES	83													ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00730000111659	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.`b #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Greater horseshoe bat	MODERN SPECIES	22	MIPEP (ENSRFEG00010003206)	TNFRSF19 (ENSRFEG00010003158)	ENSRFEG00010003106	SGCG (ENSRFEG00010003054)	PDS5B (ENSRFEG00010002968) #11	KL (ENSRFEG00010002905) #12	STARD13 (ENSRFEG00010002835) #13	ENSRFEG00010002807	RFC3 (ENSRFEG00010002784) #15	MAB21L1 (ENSRFEG00010002773) #17	NBEA (ENSRFEG00010002656) #16	DCLK1 (ENSRFEG00010002490) #18	SOHLH2 (ENSRFEG00010002418) #19	CCDC169 (ENSRFEG00010002375) #20	SPART (ENSRFEG00010002346) #21	CCNA1 (ENSRFEG00010002318) #22	SERTM1 (ENSRFEG00010002306) #24	RFXAP (ENSRFEG00010002291) #26	SMAD9 (ENSRFEG00010002255) #27	ALG5 (ENSRFEG00010002210) #30	EXOSC8 (ENSRFEG00010002172) #31	SUPT20H (ENSRFEG00010002062) #32	ENSRFEG00010002000	POSTN (ENSRFEG00010001863) #33	TRPC4 (ENSRFEG00010001740) #34	UFM1 (ENSRFEG00010001672)	FREM2 (ENSRFEG00010001609)	ENSRFEG00010001582	STOML3 (ENSRFEG00010001548)	PROSER1 (ENSRFEG00010001494)	NHLRC3 (ENSRFEG00010001424)
Microbat	MODERN SPECIES	956	ENSMLUG00000028116	ENSMLUG00000029624	ENSMLUG00000025758	ENSMLUG00000028741	CECR2 (ENSMLUG00000015021)	SLC25A18 (ENSMLUG00000014874)	ENSMLUG00000014876	BCL2L13 (ENSMLUG00000014528)	BID (ENSMLUG00000030257)	ENSMLUG00000011774	PEX26 (ENSMLUG00000009801)	TUBA8 (ENSMLUG00000002951)	USP18 (ENSMLUG00000005462)	SOHLH2 (ENSMLUG00000005505) #19	SPART (ENSMLUG00000012067) #21	CCNA1 (ENSMLUG00000000332) #22	RFXAP (ENSMLUG00000013270) #26	ENSMLUG00000006399	PROSER1 (ENSMLUG00000013195)	FREM2 (ENSMLUG00000000884)	TRPC4 (ENSMLUG00000000226) #34	POSTN (ENSMLUG00000000216) #33	SUPT20H (ENSMLUG00000014712) #32	ALG5 (ENSMLUG00000014698) #30	FAM168B (ENSMLUG00000002484)	ENSMLUG00000005063	ENSMLUG00000010563	ENSMLUG00000025808	IMP4 (ENSMLUG00000011354)	CCDC115 (ENSMLUG00000011336)	IL17RA (ENSMLUG00000003654)
Megabat	MODERN SPECIES	588																CCNA1 (ENSPVAG00000017182) #22
Equus	ANCESTRAL SPECIES	26	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174.b #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00950000183043.b.b	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391.z.b	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a
Donkey	MODERN SPECIES	29	N4BP2L1 (ENSEASG00005026852) #7	ENSEASG00005021146 #9	PDS5B (ENSEASG00005021135) #11	KL (ENSEASG00005021129) #12	STARD13 (ENSEASG00005021126) #13	RFC3 (ENSEASG00005021123) #15	ENSEASG00005021117	ENSEASG00005037449	MAB21L1 (ENSEASG00005025412) #17	NBEA (ENSEASG00005020032) #16	DCLK1 (ENSEASG00005019864) #18	ENSEASG00005036121 #18	SOHLH2 (ENSEASG00005019858) #19	ENSEASG00005019856 #20	SPART (ENSEASG00005019853) #21	CCNA1 (ENSEASG00005019850) #22	SERTM1 (ENSEASG00005038440) #24	ENSEASG00005024694	RFXAP (ENSEASG00005019840) #26	SMAD9 (ENSEASG00005019838) #27	ALG5 (ENSEASG00005019835) #30	EXOSC8 (ENSEASG00005019832) #31	SUPT20H (ENSEASG00005019825) #32	POSTN (ENSEASG00005019804) #33	TRPC4 (ENSEASG00005019794) #34	UFM1 (ENSEASG00005029256)	FREM2 (ENSEASG00005019775)	STOML3 (ENSEASG00005019765)	PROSER1 (ENSEASG00005019762)	NHLRC3 (ENSEASG00005019759)	ENSEASG00005010848
Horse	MODERN SPECIES	8	BRCA2 (ENSECAG00000014890)	N4BP2L2 (ENSECAG00000016028) #9	PDS5B (ENSECAG00000019312) #11	ENSECAG00000052360	ENSECAG00000041314	KL (ENSECAG00000008185) #12	STARD13 (ENSECAG00000011009) #13	RFC3 (ENSECAG00000021614) #15	ENSECAG00000045414	NBEA (ENSECAG00000008985) #16	MAB21L1 (ENSECAG00000004493) #17	DCLK1 (ENSECAG00000007300) #18	SOHLH2 (ENSECAG00000000201) #19	ENSECAG00000010606 #20	SPART (ENSECAG00000012173) #21	CCNA1 (ENSECAG00000019420) #22	SERTM1 (ENSECAG00000037439) #24	SMAD9 (ENSECAG00000012534)	ENSECAG00000053189	ENSECAG00000054264	RFXAP (ENSECAG00000011258) #26	ALG5 (ENSECAG00000024592) #30	EXOSC8 (ENSECAG00000012606) #31	SUPT20H (ENSECAG00000000116) #32	POSTN (ENSECAG00000023841) #33	TRPC4 (ENSECAG00000024910) #34	UFM1 (ENSECAG00000014564)	FREM2 (ENSECAG00000020410)	STOML3 (ENSECAG00000043922)	PROSER1 (ENSECAG00000017453)	NHLRC3 (ENSECAG00000008873)
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00940000165796	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518
Xenarthra	ANCESTRAL SPECIES	396												ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32
Sloth	MODERN SPECIES	2576																CCNA1 (ENSCHOG00000007241) #22
Armadillo	MODERN SPECIES	1008											DCLK1 (ENSDNOG00000005895) #18	ENSDNOG00000047611	SOHLH2 (ENSDNOG00000017970) #19	CCDC169 (ENSDNOG00000046553) #20	ENSDNOG00000015441 #21	CCNA1 (ENSDNOG00000006542) #22	SERTM1 (ENSDNOG00000013648) #24	RFXAP (ENSDNOG00000040728) #26	SMAD9 (ENSDNOG00000048385) #27	ALG5 (ENSDNOG00000019131) #30	EXOSC8 (ENSDNOG00000019133) #31	SUPT20H (ENSDNOG00000019137) #32
Afrotheria	ANCESTRAL SPECIES	166	ENSGT00940000158948.b	ENSGT00610000086058.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000165796	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24
Tenrec	MODERN SPECIES	2893																ENSETEG00000004901 #22
Afrotheria_a	ANCESTRAL SPECIES	170	ENSGT00940000155499	ENSGT00940000158948.b	ENSGT00610000086058.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000165080	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165796	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24
Hyrax	MODERN SPECIES	2350																ENSPCAG00000007622 #22
Elephant	MODERN SPECIES	26	B3GLCT (ENSLAFG00000005051)	RXFP2 (ENSLAFG00000012550)	FRY (ENSLAFG00000002669)	BRCA2 (ENSLAFG00000002670)	ENSLAFG00000000600	N4BP2L2 (ENSLAFG00000030456) #9	PDS5B (ENSLAFG00000005946) #11	KL (ENSLAFG00000015809) #12	STARD13 (ENSLAFG00000007646) #13	RFC3 (ENSLAFG00000004831) #15	NBEA (ENSLAFG00000011397) #16	ENSLAFG00000028418	DCLK1 (ENSLAFG00000007594) #18	ENSLAFG00000031057	SPART (ENSLAFG00000008624) #21	CCNA1 (ENSLAFG00000001067) #22	SERTM1 (ENSLAFG00000014428) #24
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00670000099436 #14	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000016050 #19	ENSGT00390000011174 #20	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518	ENSGT00390000000378.d.b.a.b
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.a	ENSGT00390000013518	ENSGT00390000000378.d.b.a.b
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00390000013518	ENSGT00940000161558	ENSGT00390000010017
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000153527.d.b.a.b	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00390000013518	ENSGT00940000161558	ENSGT00390000010017
koala	MODERN SPECIES	178	RNF121 (ENSPCIG00000021597)	ENSPCIG00000021598	NUMA1 (ENSPCIG00000021599)	LRRC51 (ENSPCIG00000021600)	LAMTOR1 (ENSPCIG00000021601)	TOMT (ENSPCIG00000036693)	ANAPC15 (ENSPCIG00000021603)	ENSPCIG00000021613	INPPL1 (ENSPCIG00000021609)	PHOX2A (ENSPCIG00000021614)	CLPB (ENSPCIG00000021617)	ENSPCIG00000031991	ENSPCIG00000021622	ENSPCIG00000023347	ENSPCIG00000021623	CCNA1 (ENSPCIG00000021624) #22	SERTM1 (ENSPCIG00000021627) #24	RFXAP (ENSPCIG00000021628) #26	ENSPCIG00000021629	ALG5 (ENSPCIG00000021631) #30	EXOSC8 (ENSPCIG00000021634) #31	SUPT20H (ENSPCIG00000021637) #32
Common wonbat	MODERN SPECIES	740														ENSVURG00010016542	ENSVURG00010016548	CCNA1 (ENSVURG00010016560) #22	SERTM1 (ENSVURG00010016595) #24	ENSVURG00010016609	ALG5 (ENSVURG00010016628) #30	ENSVURG00010016647 #31	SUPT20H (ENSVURG00010016704) #32	ENSVURG00010016975	POSTN (ENSVURG00010016998) #33	TRPC4 (ENSVURG00010017160) #34	ENSVURG00010017206	UFM1 (ENSVURG00010017221)	FREM2 (ENSVURG00010017236)	STOML3 (ENSVURG00010017258)	PROSER1 (ENSVURG00010017274)	NHLRC3 (ENSVURG00010017303)	ENSVURG00010017311
Wallaby	MODERN SPECIES	3873																ENSMEUG00000001251 #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000020511	ENSSHAG00000007137	ENSSHAG00000025707	ENSSHAG00000027844	LRRC51 (ENSSHAG00000002993)	NUMA1 (ENSSHAG00000005073)	TOMT (ENSSHAG00000024784)	ANAPC15 (ENSSHAG00000002646)	ENSSHAG00000027820	INPPL1 (ENSSHAG00000006877)	PHOX2A (ENSSHAG00000006734)	ENSSHAG00000002899	ENSSHAG00000000866	ENSSHAG00000001550	ENSSHAG00000000434	ENSSHAG00000003884 #22	SERTM1 (ENSSHAG00000021330) #24	RFXAP (ENSSHAG00000023216) #26	ENSSHAG00000001186	ALG5 (ENSSHAG00000004230) #30	EXOSC8 (ENSSHAG00000005532) #31	SUPT20H (ENSSHAG00000005725) #32	POSTN (ENSSHAG00000011227) #33	TRPC4 (ENSSHAG00000011972) #34	ENSSHAG00000025671	ENSSHAG00000023606	FREM2 (ENSSHAG00000002649)	STOML3 (ENSSHAG00000006814)	PROSER1 (ENSSHAG00000007220)	NHLRC3 (ENSSHAG00000007495)	LHFPL6 (ENSSHAG00000028858)
Opossum	MODERN SPECIES	3	ENSMODG00000042297 #9	ENSMODG00000009531 #9	PDS5B (ENSMODG00000009630) #11	KL (ENSMODG00000009636) #12	STARD13 (ENSMODG00000009691) #13	ENSMODG00000045424 #14	ENSMODG00000017351	RFC3 (ENSMODG00000009764) #15	ENSMODG00000024124	ENSMODG00000039285	NBEA (ENSMODG00000009914) #16	MAB21L1 (ENSMODG00000024122) #17	DCLK1 (ENSMODG00000009947) #18	ENSMODG00000009974 #20	SPART (ENSMODG00000009980) #21	CCNA1 (ENSMODG00000009993) #22	ENSMODG00000041669	SERTM1 (ENSMODG00000024121) #24	ENSMODG00000009995 #26	ENSMODG00000010017	ALG5 (ENSMODG00000010043) #30	EXOSC8 (ENSMODG00000040252) #31	SUPT20H (ENSMODG00000010085) #32	POSTN (ENSMODG00000010145) #33	TRPC4 (ENSMODG00000010167) #34	ENSMODG00000039139	ENSMODG00000048992	FREM2 (ENSMODG00000010202)	STOML3 (ENSMODG00000010211)	PROSER1 (ENSMODG00000010240)	NHLRC3 (ENSMODG00000010254)
Platypus	MODERN SPECIES	12	RXFP2 (ENSOANG00000015476)	FRY (ENSOANG00000022546)	ENSOANG00000015481	ENSOANG00000036140 #7	ENSOANG00000015484 #9	PDS5B (ENSOANG00000015485) #11	KL (ENSOANG00000015486) #12	STARD13 (ENSOANG00000015487) #13	RFC3 (ENSOANG00000039846) #15	ENSOANG00000015488 #16	ENSOANG00000049110 #16	MAB21L1 (ENSOANG00000040142) #17	DCLK1 (ENSOANG00000015492) #18	ENSOANG00000022524 #19	SPART (ENSOANG00000015493) #21	CCNA1 (ENSOANG00000015494) #22	SERTM1 (ENSOANG00000015496) #24	ENSOANG00000036145 #26	ENSOANG00000015497	ALG5 (ENSOANG00000015498) #30	EXOSC8 (ENSOANG00000015500) #31	SUPT20H (ENSOANG00000015502) #32	POSTN (ENSOANG00000015504) #33	TRPC4 (ENSOANG00000015506) #34	ENSOANG00000040264	FREM2 (ENSOANG00000015508)	STOML3 (ENSOANG00000015509)	PROSER1 (ENSOANG00000046347)	NHLRC3 (ENSOANG00000015511)	LHFPL6 (ENSOANG00000015512)	COG6 (ENSOANG00000015513)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000158948.b	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT00940000158338	ENSGT00940000155565.e.a	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000168076	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT01030000235231	ENSGT00730000111265	ENSGT00940000158617
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265	ENSGT01030000235231	ENSGT00940000158617	ENSGT00940000159661
Argentine black and white tegu	MODERN SPECIES		B3GLCT (ENSSMRG00000013095)	FRY (ENSSMRG00000013093)	ZAR1L (ENSSMRG00000013092)	BRCA2 (ENSSMRG00000013090)	ENSSMRG00000013089	ENSSMRG00000013088 #9	PDS5B (ENSSMRG00000013086) #11	KL (ENSSMRG00000013085) #12	STARD13 (ENSSMRG00000013084) #13	RFC3 (ENSSMRG00000013082) #15	MAB21L1 (ENSSMRG00000013080) #17	NBEA (ENSSMRG00000006588) #16	DCLK1 (ENSSMRG00000006415) #18	ENSSMRG00000006385	SPART (ENSSMRG00000006381) #21	CCNA1 (ENSSMRG00000006375) #22	SERTM1 (ENSSMRG00000006373) #24	RFXAP (ENSSMRG00000006372) #26	SMAD9 (ENSSMRG00000006369) #27	B4GALT4 (ENSSMRG00000006343)	ENSSMRG00000006339	ENSSMRG00000006328	ARHGAP31 (ENSSMRG00000006297)	UPK1B (ENSSMRG00000006256)	IGSF11 (ENSSMRG00000006236)	ENSSMRG00000006151	LSAMP (ENSSMRG00000006080)	ENSSMRG00000005810	GAP43 (ENSSMRG00000005809)	ENSSMRG00000005704	ZBTB20 (ENSSMRG00000005702)
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000003760	ENSPMRG00000003764	ENSPMRG00000003768	PDS5B (ENSPMRG00000003777) #11	KL (ENSPMRG00000003789) #12	STARD13 (ENSPMRG00000003795) #13	RFC3 (ENSPMRG00000003809) #15	NBEA (ENSPMRG00000004230) #16	MAB21L1 (ENSPMRG00000006735) #17	ENSPMRG00000006741 #18	ENSPMRG00000006746 #18	ENSPMRG00000006750	ENSPMRG00000006755	ENSPMRG00000006762	SPART (ENSPMRG00000006769) #21	CCNA1 (ENSPMRG00000006778) #22	SERTM1 (ENSPMRG00000006782) #24	RFXAP (ENSPMRG00000006786) #26	SMAD9 (ENSPMRG00000006792) #27	B4GALT4 (ENSPMRG00000006801)	ENSPMRG00000006807	ENSPMRG00000006821	ENSPMRG00000006836	ARHGAP31 (ENSPMRG00000006839)	UPK1B (ENSPMRG00000006850)	ENSPMRG00000006865	ENSPMRG00000006871	IGSF11 (ENSPMRG00000006881)	ENSPMRG00000006893	ENSPMRG00000006907	ENSPMRG00000006916
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT01030000235231	ENSGT00730000111265	ENSGT00940000158617	ENSGT00940000159661
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000159635	ENSGT00940000155499	ENSGT00610000086058.b.h	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT01030000235231	ENSGT00730000111265	ENSGT00940000158617	ENSGT01090000260013.a.b
Indian cobra	MODERN SPECIES	4	FRY (ENSNNAG00000018221)	ENSNNAG00000018210	ENSNNAG00000018200	ENSNNAG00000018198	ENSNNAG00000018192 #9	PDS5B (ENSNNAG00000018185) #11	KL (ENSNNAG00000018166) #12	ENSNNAG00000018150 #13	ENSNNAG00000018146 #13	RFC3 (ENSNNAG00000018137) #15	MAB21L1 (ENSNNAG00000018134) #17	NBEA (ENSNNAG00000007224) #16	ENSNNAG00000005797 #18	ENSNNAG00000005742 #18	SPART (ENSNNAG00000005725) #21	CCNA1 (ENSNNAG00000005686) #22	SERTM1 (ENSNNAG00000005673) #24	RFXAP (ENSNNAG00000005595) #26	SMAD9 (ENSNNAG00000005485) #27	B4GALT4 (ENSNNAG00000005434)	ENSNNAG00000005413	ARHGAP31 (ENSNNAG00000005377)	UPK1B (ENSNNAG00000005341)	IGSF11 (ENSNNAG00000005257)	ENSNNAG00000005237	LSAMP (ENSNNAG00000005154)	ENSNNAG00000005144	GAP43 (ENSNNAG00000005135)	ZBTB20 (ENSNNAG00000005121)	ENSNNAG00000005104	ENSNNAG00000005093
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00940000159635	ENSGT00940000155499	ENSGT00610000086058.b.h	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265	ENSGT01030000235231	ENSGT00940000158617	ENSGT01090000260013.a.b
Blue-lipped sea krait	MODERN SPECIES	1318																CCNA1 (ENSLLTG00000006042) #22
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000159635	ENSGT00940000155499	ENSGT00610000086058.b.h	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000154934.B #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154956 #18	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000158378	ENSGT00940000166068	ENSGT00940000165782	ENSGT00940000159458	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265	ENSGT01030000235231	ENSGT00940000158617	ENSGT01090000260013.a.b
Eastern brown snake	MODERN SPECIES	41	FRY (ENSPTXG00000005637)	ZAR1L (ENSPTXG00000006963)	ENSPTXG00000006966	ENSPTXG00000006968	ENSPTXG00000006971 #9	ENSPTXG00000006973 #9	PDS5B (ENSPTXG00000006975) #11	KL (ENSPTXG00000006977) #12	STARD13 (ENSPTXG00000006980) #13	RFC3 (ENSPTXG00000007083) #15	NBEA (ENSPTXG00000007084) #16	MAB21L1 (ENSPTXG00000007088) #17	ENSPTXG00000007091 #18	ENSPTXG00000007130 #18	SPART (ENSPTXG00000007131) #21	CCNA1 (ENSPTXG00000007132) #22	SERTM1 (ENSPTXG00000007133) #24	RFXAP (ENSPTXG00000007134) #26	SMAD9 (ENSPTXG00000007135) #27	B4GALT4 (ENSPTXG00000007136)	ENSPTXG00000009065	ENSPTXG00000009066	ARHGAP31 (ENSPTXG00000009076)	UPK1B (ENSPTXG00000009267)	IGSF11 (ENSPTXG00000009268)	ENSPTXG00000009270	ENSPTXG00000009271	LSAMP (ENSPTXG00000009272)	GAP43 (ENSPTXG00000009273)	ENSPTXG00000009274	ZBTB20 (ENSPTXG00000009275)
Mainland tiger snake	MODERN SPECIES	164											NBEA (ENSNSUG00000010840) #16	MAB21L1 (ENSNSUG00000010846) #17	ENSNSUG00000010849 #18	ENSNSUG00000010851 #18	SPART (ENSNSUG00000010852) #21	CCNA1 (ENSNSUG00000010853) #22	SERTM1 (ENSNSUG00000010856) #24	RFXAP (ENSNSUG00000010857) #26	SMAD9 (ENSNSUG00000010862) #27	B4GALT4 (ENSNSUG00000010871)	ENSNSUG00000010872	ENSNSUG00000010873	ARHGAP31 (ENSNSUG00000010878)	UPK1B (ENSNSUG00000010879)	IGSF11 (ENSNSUG00000010885)
Lizard	MODERN SPECIES	2	ZAR1L (ENSACAG00000004594)	BRCA2 (ENSACAG00000004541)	ENSACAG00000004526	ENSACAG00000044695 #9	N4BP2L2 (ENSACAG00000004509) #9	PDS5B (ENSACAG00000004327) #11	ENSACAG00000039574	ENSACAG00000003886 #15	MAB21L1 (ENSACAG00000004191) #17	ENSACAG00000041308	NBEA (ENSACAG00000003942) #16	ENSACAG00000004272 #18	ENSACAG00000025881 #18	ENSACAG00000004313	SPART (ENSACAG00000004319) #21	CCNA1 (ENSACAG00000004378) #22	SERTM1 (ENSACAG00000004458) #24	ENSACAG00000004463	ENSACAG00000041188	ENSACAG00000034776	B4GALT4 (ENSACAG00000004513)	ENSACAG00000004569	ENSACAG00000045347	ENSACAG00000004625	ENSACAG00000041362	ENSACAG00000004634	UPK1B (ENSACAG00000004662)	ENSACAG00000041949	ENSACAG00000043478	IGSF11 (ENSACAG00000041725)	ENSACAG00000040976
tuatara	MODERN SPECIES	1894								ENSSPUG00000010311 #16	MAB21L1 (ENSSPUG00000010322) #17	ENSSPUG00000010338 #16	ENSSPUG00000010343	ENSSPUG00000010356 #16	DCLK1 (ENSSPUG00000010484) #18	ENSSPUG00000010925 #19	SPART (ENSSPUG00000010944) #21	CCNA1 (ENSSPUG00000010957) #22	SERTM1 (ENSSPUG00000010986) #24	RFXAP (ENSSPUG00000010994) #26	ENSSPUG00000011004
Archelosauria	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Archosauria	ANCESTRAL SPECIES	2	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Aves	ANCESTRAL SPECIES		ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000154136.k.b.b.a	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a.c	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Anatidae	ANCESTRAL SPECIES	16	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000154136.k.b.b.a.c.b	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Pink-footed goose	MODERN SPECIES	116											MAB21L1 (ENSABRG00000006259) #17	NBEA (ENSABRG00000006151) #16	DCLK1 (ENSABRG00000006124) #18	ENSABRG00000006104	SPART (ENSABRG00000006087) #21	CCNA1 (ENSABRG00000006066) #22	SERTM1 (ENSABRG00000006035) #24	RFXAP (ENSABRG00000006029) #26	ENSABRG00000006021	ALG5 (ENSABRG00000006007) #30	EXOSC8 (ENSABRG00000005995) #31	SUPT20H (ENSABRG00000005967) #32	POSTN (ENSABRG00000005923) #33	TRPC4 (ENSABRG00000005902) #34	ENSABRG00000005896	UFM1 (ENSABRG00000005890)	FREM2 (ENSABRG00000005865)	ENSABRG00000005785	STOML3 (ENSABRG00000005723)	PROSER1 (ENSABRG00000005677)	NHLRC3 (ENSABRG00000005665)
Duck	MODERN SPECIES		BRCA2 (ENSAPLG00000007774)	N4BP2L1 (ENSAPLG00000026439) #7	ENSAPLG00000024140	ENSAPLG00000030183 #9	PDS5B (ENSAPLG00000008377) #11	ENSAPLG00000018956 #12	STARD13 (ENSAPLG00000009841) #13	RFC3 (ENSAPLG00000010374) #15	ENSAPLG00000024147 #16	MAB21L1 (ENSAPLG00000023847) #17	ENSAPLG00000018948 #16	ENSAPLG00000010039 #16	DCLK1 (ENSAPLG00000009916) #18	ENSAPLG00000029353	SPART (ENSAPLG00000018313) #21	CCNA1 (ENSAPLG00000009813) #22	SERTM1 (ENSAPLG00000016590) #24	ENSAPLG00000009135	ALG5 (ENSAPLG00000009011) #30	EXOSC8 (ENSAPLG00000007895) #31	SUPT20H (ENSAPLG00000007566) #32	POSTN (ENSAPLG00000006311) #33	TRPC4 (ENSAPLG00000005816) #34	ENSAPLG00000021844	PDCL3 (ENSAPLG00000016296)	ENSAPLG00000002005	ENSAPLG00000016292	CHST10 (ENSAPLG00000016175)	LONRF2 (ENSAPLG00000016120)	ENSAPLG00000016085	ENSAPLG00000017317
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000154136.k.b.b.a.a	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a.c.a	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT00960000190658	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Japanese quail	MODERN SPECIES		B3GLCT (ENSCJPG00005020417)	FRY (ENSCJPG00005020415)	ZAR1L (ENSCJPG00005020414)	ENSCJPG00005020413	BRCA2 (ENSCJPG00005020412)	ENSCJPG00005020411 #9	PDS5B (ENSCJPG00005019946) #11	KL (ENSCJPG00005019920) #12	STARD13 (ENSCJPG00005019919) #13	RFC3 (ENSCJPG00005019916) #15	MAB21L1 (ENSCJPG00005019912) #17	NBEA (ENSCJPG00005019906) #16	DCLK1 (ENSCJPG00005019904) #18	ENSCJPG00005019899	SPART (ENSCJPG00005019898) #21	CCNA1 (ENSCJPG00005019896) #22	SERTM1 (ENSCJPG00005019893) #24	ENSCJPG00005019892	ALG5 (ENSCJPG00005019890) #30	EXOSC8 (ENSCJPG00005019889) #31	SUPT20H (ENSCJPG00005019888) #32	POSTN (ENSCJPG00005019886) #33	TRPC4 (ENSCJPG00005019885) #34	UFM1 (ENSCJPG00005019884)	FREM2 (ENSCJPG00005019881)	ENSCJPG00005019880	ENSCJPG00005019879	STOML3 (ENSCJPG00005019878)	PROSER1 (ENSCJPG00005019876)	NHLRC3 (ENSCJPG00005019875)	LHFPL1 (ENSCJPG00005019874)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000154136.k.b.b.a.a	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a.c.a.b.b	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00960000190658	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Chicken	MODERN SPECIES		ZAR1L (ENSGALG00010006752)	BRCA2 (ENSGALG00010006740)	ENSGALG00010006728	ENSGALG00010006716 #9	PDS5B (ENSGALG00010006657) #11	ENSGALG00010006623	KL (ENSGALG00010006608) #12	ENSGALG00010006598	STARD13 (ENSGALG00010006592) #13	RFC3 (ENSGALG00010006542) #15	MAB21L1 (ENSGALG00010007188) #17	NBEA (ENSGALG00010006516) #16	DCLK1 (ENSGALG00010006472) #18	ENSGALG00010006408	SPART (ENSGALG00010006381) #21	CCNA1 (ENSGALG00010006366) #22	SERTM1 (ENSGALG00010006361) #24	RFXAP (ENSGALG00010006342) #26	SMAD9 (ENSGALG00010006331)	ALG5 (ENSGALG00010006310) #30	EXOSC8 (ENSGALG00010006263) #31	SUPT20H (ENSGALG00010006246) #32	POSTN (ENSGALG00010002373) #33	TRPC4 (ENSGALG00010002362) #34	UFM1 (ENSGALG00010002355)	FREM2 (ENSGALG00010002358)	ENSGALG00010002788	ENSGALG00010002767	STOML3 (ENSGALG00010002756)	PROSER1 (ENSGALG00010002742)	NHLRC3 (ENSGALG00010002716)
Turkey	DUPLICATION
Turkey	MODERN SPECIES		ENSMGAG00000015178	ENSMGAG00000015179	ENSMGAG00000015182	ENSMGAG00000017955	ENSMGAG00000018275	ENSMGAG00000015050	ENSMGAG00000021843	ENSMGAG00000015053 #34	ENSMGAG00000015054 #33	ENSMGAG00000016944 #32	ENSMGAG00000020411 #32	ENSMGAG00000015057 #31	ENSMGAG00000015058 #30	ENSMGAG00000015060	SERTM1 (ENSMGAG00000021538) #24	ENSMGAG00000015062 #22	ENSMGAG00000015063 #21	ENSMGAG00000018289	ENSMGAG00000015065 #18	RFC3 (ENSMGAG00000015069) #15	ENSMGAG00000015071 #12	ENSMGAG00000015070 #13	ENSMGAG00000020190 ##13	ENSMGAG00000015073 #11	ENSMGAG00000015074 #9	ENSMGAG00000019954	ENSMGAG00000018883 #7	ENSMGAG00000015077	ENSMGAG00000015076	ENSMGAG00000015080	ENSMGAG00000015082
Turkey	MODERN SPECIES	1299	ENSMGAG00000019980	ENSMGAG00000007398	ENSMGAG00000007418	ENSMGAG00000007259	ENSMGAG00000007248	ENSMGAG00000019948	ENSMGAG00000019448	ENSMGAG00000017844	ENSMGAG00000022992	ENSMGAG00000007579	ENSMGAG00000007376	ENSMGAG00000007459	ENSMGAG00000019034	ENSMGAG00000007543	ENSMGAG00000022637	ENSMGAG00000017964 #22	ENSMGAG00000002398	ENSMGAG00000007595	ENSMGAG00000007689	ABCA1 (ENSMGAG00000007603)	SLC44A1 (ENSMGAG00000007696)	FSD1L (ENSMGAG00000007752)	TAL2 (ENSMGAG00000018297)	TMEM38B (ENSMGAG00000022470)	ZNF462 (ENSMGAG00000007777)	ENSMGAG00000018394	RAD23B (ENSMGAG00000018137)	ENSMGAG00000018732	ENSMGAG00000019509	LMNB1 (ENSMGAG00000007892)	PHAX (ENSMGAG00000007863)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT01080000257332.A.a.a	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Golden eagle	MODERN SPECIES	10	FRY (ENSACCG00020014960)	ZAR1L (ENSACCG00020014519)	BRCA2 (ENSACCG00020014462)	ENSACCG00020014431	ENSACCG00020014403 #9	PDS5B (ENSACCG00020014344) #11	KL (ENSACCG00020014308) #12	STARD13 (ENSACCG00020014277) #13	RFC3 (ENSACCG00020014231) #15	ENSACCG00020014208	MAB21L1 (ENSACCG00020014196) #17	NBEA (ENSACCG00020014155) #16	DCLK1 (ENSACCG00020014070) #18	ENSACCG00020014019	SPART (ENSACCG00020013992) #21	CCNA1 (ENSACCG00020013966) #22	SERTM1 (ENSACCG00020013956) #24	ENSACCG00020013931	ALG5 (ENSACCG00020013873) #30	EXOSC8 (ENSACCG00020013847) #31	SUPT20H (ENSACCG00020013809) #32	POSTN (ENSACCG00020013761) #33	TRPC4 (ENSACCG00020013743) #34	UFM1 (ENSACCG00020013693)	FREM2 (ENSACCG00020013626)	ENSACCG00020013515	STOML3 (ENSACCG00020013309)	PROSER1 (ENSACCG00020013159)	NHLRC3 (ENSACCG00020013128)
Kakapo	MODERN SPECIES	11	ZAR1L (ENSSHBG00005014049)	BRCA2 (ENSSHBG00005013855)	ENSSHBG00005013829	ENSSHBG00005013809 #7	N4BP2L2 (ENSSHBG00005013802) #9	PDS5B (ENSSHBG00005013790) #11	ENSSHBG00005013763 #12	STARD13 (ENSSHBG00005012611) #13	ENSSHBG00005012475	RFC3 (ENSSHBG00005012453) #15	MAB21L1 (ENSSHBG00005012438) #17	NBEA (ENSSHBG00005004755) #16	DCLK1 (ENSSHBG00005004306) #18	ENSSHBG00005004298	SPART (ENSSHBG00005004292) #21	CCNA1 (ENSSHBG00005004268) #22	SERTM1 (ENSSHBG00005004260) #24	RFXAP (ENSSHBG00005004249) #26	SMAD9 (ENSSHBG00005004185) #27	ALG5 (ENSSHBG00005004162) #30	EXOSC8 (ENSSHBG00005004149) #31	SUPT20H (ENSSHBG00005004132) #32	POSTN (ENSSHBG00005004120) #33	TRPC4 (ENSSHBG00005004101) #34	UFM1 (ENSSHBG00005004089)	FREM2 (ENSSHBG00005004064)	ENSSHBG00005004040	ENSSHBG00005004017	STOML3 (ENSSHBG00005004009)	PROSER1 (ENSSHBG00005003991)	NHLRC3 (ENSSHBG00005003965)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564.c #7	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564.c #7	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Flycatcher	MODERN SPECIES		FRY (ENSFALG00000008469)	ZAR1L (ENSFALG00000008466)	BRCA2 (ENSFALG00000008451)	N4BP2L1 (ENSFALG00000028257) #7	N4BP2L2 (ENSFALG00000028428) #9	ENSFALG00000022968 #7	PDS5B (ENSFALG00000008419) #11	ENSFALG00000024422 #12	STARD13 (ENSFALG00000008396) #13	RFC3 (ENSFALG00000008377) #15	MAB21L1 (ENSFALG00000027361) #17	NBEA (ENSFALG00000008342) #16	DCLK1 (ENSFALG00000008330) #18	ENSFALG00000008328	SPART (ENSFALG00000008320) #21	CCNA1 (ENSFALG00000008304) #22	SERTM1 (ENSFALG00000014771) #24	RFXAP (ENSFALG00000027286) #26	ENSFALG00000008280	ALG5 (ENSFALG00000023840) #30	EXOSC8 (ENSFALG00000008262) #31	SUPT20H (ENSFALG00000008260) #32	POSTN (ENSFALG00000008222) #33	TRPC4 (ENSFALG00000008176) #34	ENSFALG00000026029	FREM2 (ENSFALG00000008163)	ENSFALG00000008158	STOML3 (ENSFALG00000008146)	PROSER1 (ENSFALG00000008138)	NHLRC3 (ENSFALG00000026440)	ENSFALG00000008609
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Medium ground finch	MODERN SPECIES	115	B3GLCT (ENSGFOG00000014706)	FRY (ENSGFOG00000014661)	ZAR1L (ENSGFOG00000014632)	BRCA2 (ENSGFOG00000014630)	ENSGFOG00000014627	ENSGFOG00000014625 #9	PDS5B (ENSGFOG00000014620) #11	KL (ENSGFOG00000014609) #12	STARD13 (ENSGFOG00000014592) #13	RFC3 (ENSGFOG00000014579) #15	MAB21L1 (ENSGFOG00000014574) #17	NBEA (ENSGFOG00000014486) #16	DCLK1 (ENSGFOG00000014445) #18	ENSGFOG00000014441	SPART (ENSGFOG00000014440) #21	CCNA1 (ENSGFOG00000014436) #22
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000164462	ENSGT00940000161564.d #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b	ENSGT00390000013518
Zebra finch	MODERN SPECIES		B3GLCT (ENSTGUG00000011725)	FRY (ENSTGUG00000011735)	ZAR1L (ENSTGUG00000011760)	BRCA2 (ENSTGUG00000011763)	ENSTGUG00000025842	ENSTGUG00000011776 #9	PDS5B (ENSTGUG00000011779) #11	ENSTGUG00000029436 #12	ENSTGUG00000011800 #12	STARD13 (ENSTGUG00000011803) #13	RFC3 (ENSTGUG00000011814) #15	MAB21L1 (ENSTGUG00000011855) #17	NBEA (ENSTGUG00000011819) #16	DCLK1 (ENSTGUG00000011857) #18	SPART (ENSTGUG00000011877) #21	CCNA1 (ENSTGUG00000011881) #22	SERTM1 (ENSTGUG00000025328) #24	RFXAP (ENSTGUG00000023849) #26	ENSTGUG00000011897	ALG5 (ENSTGUG00000011903) #30	EXOSC8 (ENSTGUG00000022331) #31	SUPT20H (ENSTGUG00000011920) #32	POSTN (ENSTGUG00000011933) #33	TRPC4 (ENSTGUG00000011947) #34	UFM1 (ENSTGUG00000025282)	FREM2 (ENSTGUG00000011967)	ENSTGUG00000011974	PROSER1 (ENSTGUG00000011985)	NHLRC3 (ENSTGUG00000011989)	ENSTGUG00000022345	ENSTGUG00000026161
Common canary	MODERN SPECIES	4	B3GLCT (ENSSCAG00000008506)	FRY (ENSSCAG00000008591)	BRCA2 (ENSSCAG00000008655)	ENSSCAG00000008685	ENSSCAG00000008689 #7	N4BP2L2 (ENSSCAG00000008691) #9	PDS5B (ENSSCAG00000008707) #11	KL (ENSSCAG00000008757) #12	STARD13 (ENSSCAG00000008920) #13	RFC3 (ENSSCAG00000009827) #15	NBEA (ENSSCAG00000010171) #16	MAB21L1 (ENSSCAG00000012293) #17	ENSSCAG00000012335 #18	ENSSCAG00000012477 #18	SPART (ENSSCAG00000012485) #21	CCNA1 (ENSSCAG00000012496) #22	SERTM1 (ENSSCAG00000012515) #24	RFXAP (ENSSCAG00000012534) #26	ENSSCAG00000012558	ALG5 (ENSSCAG00000012561) #30	EXOSC8 (ENSSCAG00000012567) #31	SUPT20H (ENSSCAG00000012580) #32	POSTN (ENSSCAG00000012605) #33	TRPC4 (ENSSCAG00000012651) #34	UFM1 (ENSSCAG00000012749)	FREM2 (ENSSCAG00000012760)	ENSSCAG00000012789	STOML3 (ENSSCAG00000012808)	PROSER1 (ENSSCAG00000012814)	NHLRC3 (ENSSCAG00000012820)	LHFPL1 (ENSSCAG00000012834)
Great tit	MODERN SPECIES		B3GLCT (ENSPMJG00000017445)	FRY (ENSPMJG00000015047)	ZAR1L (ENSPMJG00000015024)	BRCA2 (ENSPMJG00000015023)	ENSPMJG00000015022	ENSPMJG00000015021 #9	PDS5B (ENSPMJG00000015020) #11	ENSPMJG00000015019 #12	STARD13 (ENSPMJG00000015018) #13	RFC3 (ENSPMJG00000015017) #15	NBEA (ENSPMJG00000015015) #16	ENSPMJG00000015014	ENSPMJG00000015013	DCLK1 (ENSPMJG00000015012) #18	SPART (ENSPMJG00000015011) #21	CCNA1 (ENSPMJG00000015010) #22	SERTM1 (ENSPMJG00000015008) #24	RFXAP (ENSPMJG00000015007) #26	ENSPMJG00000015006	ALG5 (ENSPMJG00000015005) #30	EXOSC8 (ENSPMJG00000015004) #31	SUPT20H (ENSPMJG00000015003) #32	POSTN (ENSPMJG00000015000) #33	TRPC4 (ENSPMJG00000014999) #34	UFM1 (ENSPMJG00000014997)	FREM2 (ENSPMJG00000014982)	ENSPMJG00000014981	STOML3 (ENSPMJG00000014979)	PROSER1 (ENSPMJG00000014978)	NHLRC3 (ENSPMJG00000014977)	LHFPL1 (ENSPMJG00000014976)
African ostrich	MODERN SPECIES	1023	ENSSCUG00000014652	FRY (ENSSCUG00000014593)	ZAR1L (ENSSCUG00000014533)	BRCA2 (ENSSCUG00000014528)	ENSSCUG00000014525	ENSSCUG00000014518 #9	PDS5B (ENSSCUG00000014504) #11	STARD13 (ENSSCUG00000014475) #13	RFC3 (ENSSCUG00000014468) #15	ENSSCUG00000014464	MAB21L1 (ENSSCUG00000014455) #17	NBEA (ENSSCUG00000013717) #16	DCLK1 (ENSSCUG00000013393) #18	ENSSCUG00000013392	SPART (ENSSCUG00000013391) #21	CCNA1 (ENSSCUG00000013389) #22	SERTM1 (ENSSCUG00000013386) #24	SMAD9 (ENSSCUG00000013384) #27	ALG5 (ENSSCUG00000013383) #30	EXOSC8 (ENSSCUG00000013382) #31	SUPT20H (ENSSCUG00000013378) #32	POSTN (ENSSCUG00000013368) #33	TRPC4 (ENSSCUG00000013366) #34
Australian saltwater crocodile	MODERN SPECIES	27	ZAR1L (ENSCPRG00005005969)	ENSCPRG00005005966	ENSCPRG00005005962	BRCA2 (ENSCPRG00005005931)	ENSCPRG00005005920	ENSCPRG00005005905 #9	PDS5B (ENSCPRG00005005806) #11	KL (ENSCPRG00005005721) #12	STARD13 (ENSCPRG00005005707) #13	RFC3 (ENSCPRG00005005604) #15	MAB21L1 (ENSCPRG00005005536) #17	NBEA (ENSCPRG00005005458) #16	DCLK1 (ENSCPRG00005005403) #18	ENSCPRG00005005360	SPART (ENSCPRG00005005334) #21	CCNA1 (ENSCPRG00005005315) #22	SERTM1 (ENSCPRG00005005297) #24	ENSCPRG00005005247	ALG5 (ENSCPRG00005005226) #30	EXOSC8 (ENSCPRG00005005183) #31	SUPT20H (ENSCPRG00005005145) #32	ENSCPRG00005005140	POSTN (ENSCPRG00005003712) #33	TRPC4 (ENSCPRG00005003556) #34	FREM2 (ENSCPRG00005003508)	STOML3 (ENSCPRG00005003483)	PROSER1 (ENSCPRG00005003477)	NHLRC3 (ENSCPRG00005003474)	ENSCPRG00005003454	COG6 (ENSCPRG00005003434)	FOXO1 (ENSCPRG00005003424)
Cryptodira	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT01050000244827.C.c.a.b #17	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000163092 #27	ENSGT00940000154391.a.b.e	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.c.a #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.B.e #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.f #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235.a #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b.e	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00990000203589.a.b.a.b
Testudinidae	ANCESTRAL SPECIES		ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.c.a #12	ENSGT00390000004147.b	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.B.e #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.f #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235.a #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b.e	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00390000013518
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005001882	ZAR1L (ENSGEVG00005001897)	BRCA2 (ENSGEVG00005001942)	N4BP2L1 (ENSGEVG00005002015) #7	ENSGEVG00005002030 #9	PDS5B (ENSGEVG00005002104) #11	KL (ENSGEVG00005002226) #12	STARD13 (ENSGEVG00005002320) #13	ENSGEVG00005002342	RFC3 (ENSGEVG00005002352) #15	ENSGEVG00005002362	NBEA (ENSGEVG00005002417) #16	MAB21L1 (ENSGEVG00005002472) #17	ENSGEVG00005002498	SPART (ENSGEVG00005002510) #21	CCNA1 (ENSGEVG00005002565) #22	SERTM1 (ENSGEVG00005002577) #24	ENSGEVG00005002585	RFXAP (ENSGEVG00005002595) #26	ENSGEVG00005002631	ALG5 (ENSGEVG00005002672) #30	EXOSC8 (ENSGEVG00005002690) #31	SUPT20H (ENSGEVG00005002726) #32	POSTN (ENSGEVG00005002813) #33	TRPC4 (ENSGEVG00005002847) #34	UFM1 (ENSGEVG00005002880)	FREM2 (ENSGEVG00005002906)	ENSGEVG00005003001	STOML3 (ENSGEVG00005003103)	PROSER1 (ENSGEVG00005003118)	NHLRC3 (ENSGEVG00005003132)
Abingdon island giant tortoise	MODERN SPECIES	60													ENSCABG00000008710 #18	ENSCABG00000008711	SPART (ENSCABG00000008713) #21	CCNA1 (ENSCABG00000008727) #22	ENSCABG00000008731
Emydidae	ANCESTRAL SPECIES	19	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614.c.a #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.B.e #16	ENSGT01050000244827.C.c.a.b #17	ENSGT00940000154934.B.f #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235.a #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000155437.gc.a	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b.e #34	ENSGT01060000248594.e.b.f #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT00940000155739	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	67	ENSTMTG00000008820	ENSTMTG00000008873	ENSTMTG00000009293 #7	ENSTMTG00000009307 #9	ENSTMTG00000009385 #11	ENSTMTG00000009759 #12	ENSTMTG00000010074 #13	ENSTMTG00000011823 #15	ENSTMTG00000011875	ENSTMTG00000011919 #16	ENSTMTG00000012094 #17	ENSTMTG00000012116 #18	ENSTMTG00000012305 #18	ENSTMTG00000012325	ENSTMTG00000012341 #21	ENSTMTG00000012395 #22	ENSTMTG00000012430 #24	ENSTMTG00000012440 #26	ENSTMTG00000012470	ENSTMTG00000012601 #30	ENSTMTG00000012643 #31	ENSTMTG00000012781 #32	ENSTMTG00000012880 #33	ENSTMTG00000012951 #34
Three-toed box turtle	MODERN SPECIES	66	ENSTMTG00000017700	ENSTMTG00000018001 #7	ENSTMTG00000018017 #9	ENSTMTG00000018093 #11	ENSTMTG00000018652 #12	ENSTMTG00000018756 #13	ENSTMTG00000019480 #15	ENSTMTG00000019530	ENSTMTG00000019576 #16	ENSTMTG00000019653 #17	ENSTMTG00000019665 #16	ENSTMTG00000019756 #18	ENSTMTG00000019816 #18	ENSTMTG00000019830	ENSTMTG00000019838 #21	ENSTMTG00000019846 #22	ENSTMTG00000019861 #24	ENSTMTG00000019865 #26	ENSTMTG00000019884	ENSTMTG00000019943 #30	ENSTMTG00000019951 #31	ENSTMTG00000019987 #32	ENSTMTG00000020252 #33	ENSTMTG00000020291 #34	ENSTMTG00000020326	ENSTMTG00000020346	ENSTMTG00000020410	ENSTMTG00000020453	ENSTMTG00000020497	ENSTMTG00000020508	ENSTMTG00000020513
painted turtle	MODERN SPECIES		ZAR1L (ENSCPBG00000003846)	BRCA2 (ENSCPBG00000003790)	N4BP2L1 (ENSCPBG00000003771) #7	ENSCPBG00000003759 #9	ENSCPBG00000003734 #9	PDS5B (ENSCPBG00000003669) #11	ENSCPBG00000003622 #12	STARD13 (ENSCPBG00000003585) #13	RFC3 (ENSCPBG00000003552) #15	ENSCPBG00000003543	MAB21L1 (ENSCPBG00000003514) #17	NBEA (ENSCPBG00000003439) #16	DCLK1 (ENSCPBG00000003355) #18	ENSCPBG00000003325	ENSCPBG00000003301 #21	CCNA1 (ENSCPBG00000003264) #22	SERTM1 (ENSCPBG00000003243) #24	RFXAP (ENSCPBG00000003212) #26	ENSCPBG00000003195	ALG5 (ENSCPBG00000003180) #30	EXOSC8 (ENSCPBG00000003168) #31	SUPT20H (ENSCPBG00000003139) #32	POSTN (ENSCPBG00000003003) #33	ENSCPBG00000002976 #34	UFM1 (ENSCPBG00000002947)	FREM2 (ENSCPBG00000002703)	ENSCPBG00000002549	STOML3 (ENSCPBG00000000978)	NHLRC3 (ENSCPBG00000000846)	ENSCPBG00000000797	COG6 (ENSCPBG00000000770)
Chinese turtle	MODERN SPECIES	877													ENSPSIG00000002543 #18	ENSPSIG00000002535	SPART (ENSPSIG00000002532) #21	CCNA1 (ENSPSIG00000002519) #22	ENSPSIG00000000448	SERTM1 (ENSPSIG00000000430) #24	ENSPSIG00000002518 #26	SMAD9 (ENSPSIG00000002483) #27	ALG5 (ENSPSIG00000002447) #30	EXOSC8 (ENSPSIG00000002406) #31	SUPT20H (ENSPSIG00000002398) #32	ENSPSIG00000002396	ENSPSIG00000002376
Anura	ANCESTRAL SPECIES	27	ENSGT00940000155499	ENSGT00610000086058.b	ENSGT00390000012305.b	ENSGT00390000003602	ENSGT00940000161564 #7	ENSGT00940000161440 #9	ENSGT00940000157257 #11	ENSGT00940000157614 #12	ENSGT00950000183061.a.a.b #13	ENSGT00550000075006 #15	ENSGT00940000165093	ENSGT00940000154934.B #16	ENSGT00940000154956 #18	ENSGT00940000165436	ENSGT00390000012235 #21	ENSGT00940000157940 #22	ENSGT00390000016881 #24	ENSGT00390000006573 #26	ENSGT00940000154391.a.b	ENSGT00940000153481.C #30	ENSGT00950000183130.B #31	ENSGT00390000013549.a.a #32	ENSGT00530000063860.b #33	ENSGT01060000248594.e.b #34	ENSGT00390000010391	ENSGT00940000155313	ENSGT01030000234614.B.a.a.b	ENSGT00730000111188	ENSGT00390000008657	ENSGT00390000013518	ENSGT00940000161558
Frog	MODERN SPECIES	2	zar2 (ENSXETG00000036129)	brca2 (ENSXETG00000017011)	N4BP2L1 (ENSXETG00000036678) #7	n4bp2l2 (ENSXETG00000037890) #9	pds5b (ENSXETG00000017000) #11	kl (ENSXETG00000016972) #12	stard13 (ENSXETG00000016928) #13	rfc3 (ENSXETG00000016918) #15	trmt9b (ENSXETG00000016909)	ENSXETG00000045269	mab21l1 (ENSXETG00000017124) ##17	nbea (ENSXETG00000026016) #16	dclk1 (ENSXETG00000017114) #18	ccdc169 (ENSXETG00000030268)	spart (ENSXETG00000032577) #21	ccna1 (ENSXETG00000013224) #22	sertm1 (ENSXETG00000041988) #24	rfxap (ENSXETG00000001824) #26	smad9 (ENSXETG00000001820)	alg5 (ENSXETG00000001813) #30	exosc8 (ENSXETG00000001819) #31	supt20h (ENSXETG00000001818) #32	ENSXETG00000042844	postn (ENSXETG00000001812) #33	trpc4 (ENSXETG00000001811) #34	ufm1 (ENSXETG00000027207)	frem2 (ENSXETG00000015989)	stoml3 (ENSXETG00000016014)	proser1 (ENSXETG00000016020)	nhlrc3 (ENSXETG00000016032)	lhfpl6 (ENSXETG00000016034)
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000002098	TRPC4 (ENSLLEG00000002070) #34	POSTN (ENSLLEG00000001710) #33	ENSLLEG00000001604	ENSLLEG00000001595	ENSLLEG00000001587	ENSLLEG00000001577	ENSLLEG00000001562 ##17	NBEA (ENSLLEG00000001048) #16	ENSLLEG00000000931	ENSLLEG00000000919	DCLK1 (ENSLLEG00000000703) #18	ENSLLEG00000000629	ENSLLEG00000000498 #21	ENSLLEG00000000465	CCNA1 (ENSLLEG00000000447) #22	ENSLLEG00000000432	SERTM1 (ENSLLEG00000000426) #24	RFXAP (ENSLLEG00000030263) #26	ENSLLEG00000030183	ALG5 (ENSLLEG00000030125) #30	EXOSC8 (ENSLLEG00000030092) #31	SUPT20H (ENSLLEG00000029936) #32	RFC3 (ENSLLEG00000029884) #15	ENSLLEG00000029870	STARD13 (ENSLLEG00000029722) #13	KL (ENSLLEG00000029671) #12	ENSLLEG00000029659	ENSLLEG00000029651	PDS5B (ENSLLEG00000028674) #11	ENSLLEG00000028496