Vertebrata ANCESTRAL SPECIES 267 ENSGT00940000159188 #22 ENSGT00940000157683 #23 Gnathostomata ANCESTRAL SPECIES 641 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 Euteleostomi ANCESTRAL SPECIES 2 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000163195.A ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000001883 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000163195.A ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000159917 ENSGT00940000163414 ENSGT00940000164410 Tetrapoda ANCESTRAL SPECIES 7 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000163195.A ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Amniota ANCESTRAL SPECIES 7 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000163195.A ENSGT00940000161647 #16 ENSGT01090000260278 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT01100000263525.b.b.b Mammalia ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a #31 ENSGT00390000008932.c.b #32 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a Theria ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Glires ANCESTRAL SPECIES 18 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Rodentia ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Hystricomorpha ANCESTRAL SPECIES 14 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.l #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Naked mole-rat female MODERN SPECIES 5 ENSHGLG00000038096 #7 ICA1 (ENSHGLG00000003048) #8 GLCCI1 (ENSHGLG00000002931) #9 ENSHGLG00000002785 #10 ENSHGLG00000034935 #11 ENSHGLG00000037539 #12 ENSHGLG00000039732 #13 MIOS (ENSHGLG00000001710) #14 ENSHGLG00000001680 #15 ENSHGLG00000001565 #16 ENSHGLG00000001496 #17 ENSHGLG00000001445 #18 TAC1 (ENSHGLG00000001397) #19 ACN9 (ENSHGLG00000001283) #20 ENSHGLG00000003962 #21 DLX5 (ENSHGLG00000035624) #22 DLX6 (ENSHGLG00000036463) #23 SEM1 (ENSHGLG00000001228) #24 SLC25A13 (ENSHGLG00000001078) #25 ENSHGLG00000008153 #26 ENSHGLG00000000847 #27 DYNC1I1 (ENSHGLG00000000924) #28 PDK4 (ENSHGLG00000044007) #29 ASB4 (ENSHGLG00000000818) #30 PON2 (ENSHGLG00000044448) #31 PON3 (ENSHGLG00000003028) #32 PON1 (ENSHGLG00000048207) #33 PPP1R9A (ENSHGLG00000002745) #34 Peg10 (ENSHGLG00000039925) #35 SGCE (ENSHGLG00000002437) #36 CASD1 (ENSHGLG00000002281) #37 Hystricomorpha_a ANCESTRAL SPECIES 43 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.l #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Guinea pig MODERN SPECIES 11 THSD7A (ENSCPOG00000000279) ENSCPOG00000040423 PHF14 (ENSCPOG00000002218) NDUFA4 (ENSCPOG00000036788) NXPH1 (ENSCPOG00000006994) ICA1 (ENSCPOG00000021862) #8 GLCCI1 (ENSCPOG00000037962) #9 UMAD1 (ENSCPOG00000030933) #12 RPA3 (ENSCPOG00000036936) #13 MIOS (ENSCPOG00000011743) #14 COL28A1 (ENSCPOG00000021196) #16 ENSCPOG00000033504 #17 ENSCPOG00000009841 #18 TAC1 (ENSCPOG00000011245) #19 SDHAF3 (ENSCPOG00000014057) #20 DLX5 (ENSCPOG00000001796) #22 DLX6 (ENSCPOG00000001795) #23 SEM1 (ENSCPOG00000035520) #24 SLC25A13 (ENSCPOG00000013200) #25 ENSCPOG00000011054 #28 ENSCPOG00000037546 #28 PDK4 (ENSCPOG00000033399) #29 ASB4 (ENSCPOG00000014245) #30 PON2 (ENSCPOG00000007257) #31 PON3 (ENSCPOG00000039258) #32 PON1 (ENSCPOG00000037806) #33 ENSCPOG00000010259 PPP1R9A (ENSCPOG00000011567) #34 ENSCPOG00000037165 ##35 SGCE (ENSCPOG00000010672) #36 CASD1 (ENSCPOG00000033243) #37 Hystricomorpha_b ANCESTRAL SPECIES 62 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.l #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Long-tailed chinchilla MODERN SPECIES 139 THSD7A (ENSCLAG00000003554) PHF14 (ENSCLAG00000004153) NDUFA4 (ENSCLAG00000004050) NXPH1 (ENSCLAG00000003986) ICA1 (ENSCLAG00000003729) #8 GLCCI1 (ENSCLAG00000003639) #9 UMAD1 (ENSCLAG00000003569) #12 RPA3 (ENSCLAG00000003500) #13 MIOS (ENSCLAG00000003461) #14 COL28A1 (ENSCLAG00000003344) #16 C1GALT1 (ENSCLAG00000003286) #17 ENSCLAG00000003237 #18 ENSCLAG00000003157 #18 TAC1 (ENSCLAG00000003086) #19 SDHAF3 (ENSCLAG00000003011) #20 DLX5 (ENSCLAG00000002987) #22 DLX6 (ENSCLAG00000002971) #23 SEM1 (ENSCLAG00000002949) #24 SLC25A13 (ENSCLAG00000002917) #25 DYNC1I1 (ENSCLAG00000006396) #28 PDK4 (ENSCLAG00000017289) #29 ASB4 (ENSCLAG00000009834) #30 PON2 (ENSCLAG00000009728) #31 PON3 (ENSCLAG00000009609) #32 PON1 (ENSCLAG00000009506) #33 PPP1R9A (ENSCLAG00000008731) #34 Peg10 (ENSCLAG00000017695) #35 SGCE (ENSCLAG00000007837) #36 CASD1 (ENSCLAG00000007565) #37 COL1A2 (ENSCLAG00000009286) BET1 (ENSCLAG00000008520) Degu MODERN SPECIES 91 SDHAF3 (ENSODEG00000009620) #20 DLX5 (ENSODEG00000010609) #22 DLX6 (ENSODEG00000010072) #23 ENSODEG00000010570 #24 SLC25A13 (ENSODEG00000011496) #25 DYNC1I1 (ENSODEG00000010855) #28 PDK4 (ENSODEG00000010586) #29 ASB4 (ENSODEG00000010657) #30 PON2 (ENSODEG00000010755) #31 PON3 (ENSODEG00000011235) #32 PON1 (ENSODEG00000009868) #33 PPP1R9A (ENSODEG00000010739) #34 PEG10 (ENSODEG00000009969) #35 ENSODEG00000009551 #36 CASD1 (ENSODEG00000010520) #37 COL1A2 (ENSODEG00000010146) ENSODEG00000010232 Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Marmotini ANCESTRAL SPECIES 35 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Marmotini_b ANCESTRAL SPECIES 66 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00390000009212.i.a.a ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Squirrel MODERN SPECIES 185 NXPH1 (ENSSTOG00000024868) ICA1 (ENSSTOG00000004278) #8 GLCCI1 (ENSSTOG00000021063) #9 UMAD1 (ENSSTOG00000034216) #12 RPA3 (ENSSTOG00000031875) #13 MIOS (ENSSTOG00000014620) #14 COL28A1 (ENSSTOG00000023884) #16 C1GALT1 (ENSSTOG00000028307) #17 ASNS (ENSSTOG00000005421) #18 TAC1 (ENSSTOG00000005410) #19 ENSSTOG00000034550 #20 ENSSTOG00000034315 DLX5 (ENSSTOG00000005162) #22 DLX6 (ENSSTOG00000020785) #23 SEM1 (ENSSTOG00000011501) #24 SLC25A13 (ENSSTOG00000008106) #25 DYNC1I1 (ENSSTOG00000008078) #28 Pdk4 (ENSSTOG00000021060) #29 ASB4 (ENSSTOG00000026077) #30 PON2 (ENSSTOG00000011912) #31 PON3 (ENSSTOG00000025896) #32 PON1 (ENSSTOG00000011900) #33 ENSSTOG00000029077 #34 ENSSTOG00000030680 #34 ENSSTOG00000026064 PEG10 (ENSSTOG00000022801) #35 SGCE (ENSSTOG00000001868) #36 CASD1 (ENSSTOG00000010829) #37 Arctic ground squirrel MODERN SPECIES 91 ICA1 (ENSUPAG00010018725) #8 GLCCI1 (ENSUPAG00010018705) #9 UMAD1 (ENSUPAG00010018691) #12 RPA3 (ENSUPAG00010018685) #13 MIOS (ENSUPAG00010018670) #14 ENSUPAG00010018666 COL28A1 (ENSUPAG00010018619) #16 C1GALT1 (ENSUPAG00010018594) #17 ASNS (ENSUPAG00010018582) #18 TAC1 (ENSUPAG00010018539) #19 SDHAF3 (ENSUPAG00010018532) #20 ENSUPAG00010018528 DLX5 (ENSUPAG00010018520) #22 DLX6 (ENSUPAG00010018504) #23 SEM1 (ENSUPAG00010018488) #24 SLC25A13 (ENSUPAG00010018426) #25 DYNC1I1 (ENSUPAG00010018338) #28 PDK4 (ENSUPAG00010018316) #29 ASB4 (ENSUPAG00010018314) #30 PON2 (ENSUPAG00010018303) #31 PON3 (ENSUPAG00010018287) #32 PON1 (ENSUPAG00010018258) #33 PPP1R9A (ENSUPAG00010015293) #34 ENSUPAG00010015260 #35 SGCE (ENSUPAG00010014956) #36 CASD1 (ENSUPAG00010014912) #37 COL1A2 (ENSUPAG00010014832) BET1 (ENSUPAG00010014824) Alpin marmot MODERN SPECIES 22 PHF14 (ENSMMMG00000013854) NDUFA4 (ENSMMMG00000013836) NXPH1 (ENSMMMG00000013827) ICA1 (ENSMMMG00000013715) #8 GLCCI1 (ENSMMMG00000013684) #9 UMAD1 (ENSMMMG00000013672) #12 RPA3 (ENSMMMG00000013664) #13 MIOS (ENSMMMG00000013649) #14 ENSMMMG00000013638 COL28A1 (ENSMMMG00000013600) #16 C1GALT1 (ENSMMMG00000013591) #17 ASNS (ENSMMMG00000013577) #18 TAC1 (ENSMMMG00000013539) #19 SDHAF3 (ENSMMMG00000013528) #20 ENSMMMG00000013521 DLX5 (ENSMMMG00000013512) #22 DLX6 (ENSMMMG00000013501) #23 ENSMMMG00000013494 SEM1 (ENSMMMG00000013480) #24 SLC25A13 (ENSMMMG00000013399) #25 DYNC1I1 (ENSMMMG00000013269) #28 PDK4 (ENSMMMG00000013241) #29 ASB4 (ENSMMMG00000013230) #30 BET1 (ENSMMMG00000013215) COL1A2 (ENSMMMG00000013132) CASD1 (ENSMMMG00000013107) #37 SGCE (ENSMMMG00000012980) #36 ENSMMMG00000012971 #35 PPP1R9A (ENSMMMG00000012538) #34 PON1 (ENSMMMG00000012515) #33 PON3 (ENSMMMG00000012511) #32 Eurasian red squirrel MODERN SPECIES 17 PHF14 (ENSSVLG00005004805) ENSSVLG00005004917 ENSSVLG00005004936 NXPH1 (ENSSVLG00005004963) ICA1 (ENSSVLG00005005008) #8 GLCCI1 (ENSSVLG00005005120) #9 UMAD1 (ENSSVLG00005005159) #12 ENSSVLG00005005197 #13 MIOS (ENSSVLG00005005256) #14 COL28A1 (ENSSVLG00005005316) #16 ENSSVLG00005005474 #17 ASNS (ENSSVLG00005005522) #18 TAC1 (ENSSVLG00005005619) #19 ENSSVLG00005005692 SDHAF3 (ENSSVLG00005005726) #20 DLX5 (ENSSVLG00005005760) #22 DLX6 (ENSSVLG00005005785) #23 SEM1 (ENSSVLG00005005837) #24 SLC25A13 (ENSSVLG00005005915) #25 DYNC1I1 (ENSSVLG00005006176) #28 PDK4 (ENSSVLG00005006655) #29 ASB4 (ENSSVLG00005006747) #30 PON2 (ENSSVLG00005006826) #31 ENSSVLG00005006855 PON3 (ENSSVLG00005006880) #32 PON1 (ENSSVLG00005006959) #33 PPP1R9A (ENSSVLG00005007147) #34 ENSSVLG00005007478 ENSSVLG00005007534 PEG10 (ENSSVLG00005007575) #35 SGCE (ENSSVLG00005007757) #36 Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Muroidea ANCESTRAL SPECIES 8 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 Cricetinae ANCESTRAL SPECIES 23 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 Golden Hamster MODERN SPECIES 756 ENSMAUG00000008585 #8 Glcci1 (ENSMAUG00000009620) #9 Umad1 (ENSMAUG00000011521) #12 ENSMAUG00000000402 #13 Mios (ENSMAUG00000009947) #14 Col28a1 (ENSMAUG00000020116) #16 C1galt1 (ENSMAUG00000011248) #17 Asns (ENSMAUG00000004155) #18 Tac1 (ENSMAUG00000000832) #19 Sdhaf3 (ENSMAUG00000020491) #20 Dlx5 (ENSMAUG00000002760) #22 Dlx6 (ENSMAUG00000017933) #23 Sem1 (ENSMAUG00000016213) #24 Slc25a13 (ENSMAUG00000013308) #25 Dync1i1 (ENSMAUG00000012920) #28 Pdk4 (ENSMAUG00000014529) #29 Asb4 (ENSMAUG00000017354) #30 Pon2 (ENSMAUG00000019926) #31 Pon3 (ENSMAUG00000007231) #32 Pon1 (ENSMAUG00000016513) #33 Ppp1r9a (ENSMAUG00000017217) #34 Peg10 (ENSMAUG00000018656) #35 Sgce (ENSMAUG00000022202) #36 Casd1 (ENSMAUG00000017786) #37 Col1a2 (ENSMAUG00000018627) Bet1 (ENSMAUG00000021863) Chinese hamster chok1gshd MODERN SPECIES 54 Phf14 (ENSCGRG00001004536) Ndufa4 (ENSCGRG00001012421) ENSCGRG00001013970 ENSCGRG00001004842 Nxph1 (ENSCGRG00001017708) Ica1 (ENSCGRG00001013759) #8 Glcci1 (ENSCGRG00001020867) #9 Umad1 (ENSCGRG00001019337) #12 Rpa3 (ENSCGRG00001004183) #13 Mios (ENSCGRG00001022654) #14 Col28a1 (ENSCGRG00001018669) #16 ENSCGRG00001016873 #17 ASNS (ENSCGRG00001015428) #18 Tac1 (ENSCGRG00001020738) #19 Sdhaf3 (ENSCGRG00001012553) #20 Dlx5 (ENSCGRG00001001362) #22 Dlx6 (ENSCGRG00001015244) #23 ENSCGRG00001016396 Sem1 (ENSCGRG00001000539) #24 ENSCGRG00001023047 Slc25a13 (ENSCGRG00001024718) #25 ENSCGRG00001003096 #28 ENSCGRG00001022786 #28 Pdk4 (ENSCGRG00001014183) #29 Asb4 (ENSCGRG00001002568) #30 Pon2 (ENSCGRG00001017926) #31 Pon3 (ENSCGRG00001017513) #32 Pon1 (ENSCGRG00001017580) #33 ENSCGRG00001022001 #34 ENSCGRG00001012942 #34 ENSCGRG00001010002 #35 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 Prairie vole MODERN SPECIES 350 ENSMOCG00000008159 Phf14 (ENSMOCG00000016636) Ndufa4 (ENSMOCG00000021704) Nxph1 (ENSMOCG00000015073) ENSMOCG00000008517 #8 ENSMOCG00000019705 #8 Glcci1 (ENSMOCG00000011098) #9 Umad1 (ENSMOCG00000016635) #12 Rpa3 (ENSMOCG00000011090) #13 Mios (ENSMOCG00000017559) #14 Col28a1 (ENSMOCG00000012197) #16 C1galt1 (ENSMOCG00000009499) #17 Asns (ENSMOCG00000011530) #18 Tac1 (ENSMOCG00000014686) #19 Sdhaf3 (ENSMOCG00000004621) #20 Dlx5 (ENSMOCG00000021591) #22 Dlx6 (ENSMOCG00000010083) #23 Sem1 (ENSMOCG00000001349) #24 Slc25a13 (ENSMOCG00000010461) #25 Dync1i1 (ENSMOCG00000016558) #28 Pdk4 (ENSMOCG00000011306) #29 Asb4 (ENSMOCG00000000254) #30 Pon2 (ENSMOCG00000013410) #31 Pon3 (ENSMOCG00000013174) #32 Pon1 (ENSMOCG00000007036) #33 Ppp1r9a (ENSMOCG00000010035) #34 Peg10 (ENSMOCG00000003210) #35 Sgce (ENSMOCG00000011802) #36 Casd1 (ENSMOCG00000020135) #37 Col1a2 (ENSMOCG00000009504) ENSMOCG00000013219 Northern American deer mouse MODERN SPECIES 16 Thsd7a (ENSPEMG00000011896) Phf14 (ENSPEMG00000013539) Ndufa4 (ENSPEMG00000013663) ENSPEMG00000002763 Nxph1 (ENSPEMG00000006871) Ica1 (ENSPEMG00000011992) #8 Glcci1 (ENSPEMG00000006869) #9 ENSPEMG00000025657 Rpa3 (ENSPEMG00000028617) #13 Mios (ENSPEMG00000014859) #14 Col28a1 (ENSPEMG00000018994) #16 C1galt1 (ENSPEMG00000001879) #17 Asns (ENSPEMG00000024254) #18 Tac1 (ENSPEMG00000023534) #19 Sdhaf3 (ENSPEMG00000025504) #20 Dlx5 (ENSPEMG00000010445) #22 Dlx6 (ENSPEMG00000003902) #23 Sem1 (ENSPEMG00000023151) #24 Slc25a13 (ENSPEMG00000010195) #25 Dync1i1 (ENSPEMG00000009653) #28 Pdk4 (ENSPEMG00000000623) #29 Asb4 (ENSPEMG00000021425) #30 Pon2 (ENSPEMG00000022778) #31 Pon3 (ENSPEMG00000029851) #32 Pon1 (ENSPEMG00000021811) #33 Ppp1r9a (ENSPEMG00000023259) #34 ENSPEMG00000031065 Peg10 (ENSPEMG00000028270) #35 Sgce (ENSPEMG00000012336) #36 Casd1 (ENSPEMG00000014646) #37 Col1a2 (ENSPEMG00000011603) Murinae ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Mus ANCESTRAL SPECIES 20 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.n #9 ENSGT00390000003051.c #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Mus_B ANCESTRAL SPECIES 20 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.n #9 ENSGT00390000003051.c #12 ENSGT00390000008029.k #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Mus_C ANCESTRAL SPECIES 19 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b.n #9 ENSGT00390000003051.c #12 ENSGT00390000008029.k #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 spretus MODERN SPECIES 15 Thsd7a (MGP_SPRETEiJ_G0029104) MGP_SPRETEiJ_G0029103 Ndufa4 (MGP_SPRETEiJ_G0029102) Nxph1 (MGP_SPRETEiJ_G0029101) Ica1 (MGP_SPRETEiJ_G0029100) #8 Glcci1 (MGP_SPRETEiJ_G0029099) #9 MGP_SPRETEiJ_G0029098 #12 Umad1 (MGP_SPRETEiJ_G0029097) #12 Rpa3 (MGP_SPRETEiJ_G0029096) #13 Mios (MGP_SPRETEiJ_G0029095) #14 Col28a1 (MGP_SPRETEiJ_G0029094) #16 C1galt1 (MGP_SPRETEiJ_G0029093) #17 Asns (MGP_SPRETEiJ_G0029092) #18 Tac1 (MGP_SPRETEiJ_G0029091) #19 Sdhaf3 (MGP_SPRETEiJ_G0029090) #20 Dlx5 (MGP_SPRETEiJ_G0029089) #22 Dlx6 (MGP_SPRETEiJ_G0029088) #23 Sem1 (MGP_SPRETEiJ_G0029087) #24 Slc25a13 (MGP_SPRETEiJ_G0029086) #25 Dync1i1 (MGP_SPRETEiJ_G0029085) #28 Pdk4 (MGP_SPRETEiJ_G0029084) #29 Asb4 (MGP_SPRETEiJ_G0029083) #30 Pon2 (MGP_SPRETEiJ_G0029082) #31 MGP_SPRETEiJ_G0029081 #32 Pon1 (MGP_SPRETEiJ_G0029080) #33 Ppp1r9a (MGP_SPRETEiJ_G0029079) #34 MGP_SPRETEiJ_G0029078 ##35 Sgce (MGP_SPRETEiJ_G0029077) #36 Casd1 (MGP_SPRETEiJ_G0029076) #37 Col1a2 (MGP_SPRETEiJ_G0029075) Bet1 (MGP_SPRETEiJ_G0029074) Steppe mouse MODERN SPECIES 3097 ENSMSIG00000007764 #20 Dlx5 (ENSMSIG00000007781) #22 ENSMSIG00000007792 Dlx6 (ENSMSIG00000007812) #23 Sem1 (ENSMSIG00000007847) #24 Slc25a13 (ENSMSIG00000007876) #25 Dync1i1 (ENSMSIG00000007953) #28 ENSMSIG00000008217 Pdk4 (ENSMSIG00000008220) #29 Asb4 (ENSMSIG00000008239) #30 Pon2 (ENSMSIG00000008259) #31 Pon3 (ENSMSIG00000008274) #32 Pon1 (ENSMSIG00000008292) #33 Ppp1r9a (ENSMSIG00000008364) #34 Mouse MODERN SPECIES 15 Tmem106b (ENSMUSG00000029571) Thsd7a (ENSMUSG00000032625) Phf14 (ENSMUSG00000029629) Ndufa4 (ENSMUSG00000029632) Nxph1 (ENSMUSG00000046178) Ica1 (ENSMUSG00000062995) #8 Glcci1 (ENSMUSG00000029638) #9 Umad1 (ENSMUSG00000089862) #12 Rpa3 (ENSMUSG00000012483) #13 Mios (ENSMUSG00000042447) #14 Col28a1 (ENSMUSG00000068794) #16 C1galt1 (ENSMUSG00000042460) #17 Asns (ENSMUSG00000029752) #18 Tac1 (ENSMUSG00000061762) #19 Sdhaf3 (ENSMUSG00000042505) #20 Dlx5 (ENSMUSG00000029755) #22 Dlx6 (ENSMUSG00000029754) #23 Sem1 (ENSMUSG00000042541) #24 Slc25a13 (ENSMUSG00000015112) #25 Dync1i1 (ENSMUSG00000029757) #28 Pdk4 (ENSMUSG00000019577) #29 Asb4 (ENSMUSG00000042607) #30 Pon2 (ENSMUSG00000032667) #31 Pon3 (ENSMUSG00000029759) #32 Pon1 (ENSMUSG00000002588) #33 Ppp1r9a (ENSMUSG00000032827) #34 Peg10 (ENSMUSG00000092035) #35 Sgce (ENSMUSG00000004631) #36 Casd1 (ENSMUSG00000015189) #37 Col1a2 (ENSMUSG00000029661) Bet1 (ENSMUSG00000032757) Ryukyu mouse MODERN SPECIES 15 MGP_CAROLIEiJ_G0028104 MGP_CAROLIEiJ_G0028103 Ndufa4 (MGP_CAROLIEiJ_G0028102) Nxph1 (MGP_CAROLIEiJ_G0028101) Ica1 (MGP_CAROLIEiJ_G0028100) #8 Glcci1 (MGP_CAROLIEiJ_G0028099) #9 MGP_CAROLIEiJ_G0028098 #12 Umad1 (MGP_CAROLIEiJ_G0028097) #12 Rpa3 (MGP_CAROLIEiJ_G0028096) #13 Mios (MGP_CAROLIEiJ_G0028095) #14 Col28a1 (MGP_CAROLIEiJ_G0028094) #16 C1galt1 (MGP_CAROLIEiJ_G0028093) #17 Asns (MGP_CAROLIEiJ_G0028092) #18 Tac1 (MGP_CAROLIEiJ_G0028091) #19 Sdhaf3 (MGP_CAROLIEiJ_G0028090) #20 Dlx5 (MGP_CAROLIEiJ_G0028089) #22 Dlx6 (MGP_CAROLIEiJ_G0028088) #23 Sem1 (MGP_CAROLIEiJ_G0028087) #24 MGP_CAROLIEiJ_G0028086 #25 Dync1i1 (MGP_CAROLIEiJ_G0028085) #28 Pdk4 (MGP_CAROLIEiJ_G0028084) #29 Asb4 (MGP_CAROLIEiJ_G0028083) #30 Pon2 (MGP_CAROLIEiJ_G0028082) #31 Pon3 (MGP_CAROLIEiJ_G0028081) #32 Pon1 (MGP_CAROLIEiJ_G0028080) #33 Ppp1r9a (MGP_CAROLIEiJ_G0028079) #34 MGP_CAROLIEiJ_G0028078 #35 Sgce (MGP_CAROLIEiJ_G0028077) #36 Casd1 (MGP_CAROLIEiJ_G0028076) #37 Col1a2 (MGP_CAROLIEiJ_G0028075) Bet1 (MGP_CAROLIEiJ_G0028074) Shrew mouse MODERN SPECIES 11 Tmem106b (MGP_PahariEiJ_G0021861) Thsd7a (MGP_PahariEiJ_G0021860) MGP_PahariEiJ_G0021859 Ndufa4 (MGP_PahariEiJ_G0021858) Nxph1 (MGP_PahariEiJ_G0021857) Ica1 (MGP_PahariEiJ_G0021856) #8 Glcci1 (MGP_PahariEiJ_G0021855) #9 MGP_PahariEiJ_G0021854 #12 MGP_PahariEiJ_G0021853 #12 Rpa3 (MGP_PahariEiJ_G0021852) #13 Mios (MGP_PahariEiJ_G0021851) #14 Col28a1 (MGP_PahariEiJ_G0021850) #16 C1galt1 (MGP_PahariEiJ_G0021849) #17 Asns (MGP_PahariEiJ_G0021848) #18 Tac1 (MGP_PahariEiJ_G0021847) #19 Dlx5 (MGP_PahariEiJ_G0021845) #22 Dlx6 (MGP_PahariEiJ_G0021844) #23 Sem1 (MGP_PahariEiJ_G0021843) #24 Slc25a13 (MGP_PahariEiJ_G0021842) #25 Dync1i1 (MGP_PahariEiJ_G0021841) #28 Pdk4 (MGP_PahariEiJ_G0021840) #29 Asb4 (MGP_PahariEiJ_G0021839) #30 Pon2 (MGP_PahariEiJ_G0021838) #31 Pon3 (MGP_PahariEiJ_G0021837) #32 Pon1 (MGP_PahariEiJ_G0021836) #33 Ppp1r9a (MGP_PahariEiJ_G0021835) #34 MGP_PahariEiJ_G0021834 ##35 Sgce (MGP_PahariEiJ_G0021833) #36 Casd1 (MGP_PahariEiJ_G0021832) #37 Col1a2 (MGP_PahariEiJ_G0021831) Bet1 (MGP_PahariEiJ_G0021830) Rat MODERN SPECIES 14 ENSRNOG00000066267 LOC680964 (ENSRNOG00000047566) ENSRNOG00000065391 LOC500028 (ENSRNOG00000008962) Rps4x-ps9 (ENSRNOG00000029574) Nxph1 (ENSRNOG00000008939) Ica1 (ENSRNOG00000008628) #8 Glcci1 (ENSRNOG00000008524) #9 Rpa3 (ENSRNOG00000008309) #13 Mios (ENSRNOG00000007924) #14 Col28a1 (ENSRNOG00000033618) #16 C1galt1 (ENSRNOG00000007804) #17 Polr1d-ps1 (ENSRNOG00000065557) Asns (ENSRNOG00000007546) #18 Sdhaf3 (ENSRNOG00000011283) #20 Dlx5 (ENSRNOG00000010905) #22 ENSRNOG00000068262 Dlx6 (ENSRNOG00000063630) #23 Sem1 (ENSRNOG00000010420) #24 LOC108350671 (ENSRNOG00000064781) Slc25a13 (ENSRNOG00000009957) #25 Dync1i1 (ENSRNOG00000009700) #28 AC095825.1 (ENSRNOG00000033695) Pdk4 (ENSRNOG00000009565) #29 ENSRNOG00000069335 Asb4 (ENSRNOG00000009197) #30 Pon2 (ENSRNOG00000009112) #31 Pon3 (ENSRNOG00000009096) #32 Pon1 (ENSRNOG00000008902) #33 Ppp1r9a (ENSRNOG00000008869) #34 Peg10 (ENSRNOG00000066798) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1733 Rpa3 (ENSNGAG00000023730) #13 ENSNGAG00000001986 #14 Col28a1 (ENSNGAG00000003512) #16 ENSNGAG00000013857 #17 Asns (ENSNGAG00000015284) #18 Tac1 (ENSNGAG00000013565) #19 Sdhaf3 (ENSNGAG00000019837) #20 Dlx5 (ENSNGAG00000013507) #22 Dlx6 (ENSNGAG00000023627) #23 Sem1 (ENSNGAG00000004905) #24 Slc25a13 (ENSNGAG00000004196) #25 Dync1i1 (ENSNGAG00000010254) #28 Lesser Egyptian jerboa MODERN SPECIES 59 Kcnk9 (ENSJJAG00000018506) ENSJJAG00000005425 Nxph1 (ENSJJAG00000020417) ENSJJAG00000021248 #8 ENSJJAG00000024066 #9 Umad1 (ENSJJAG00000021097) #12 ENSJJAG00000022866 Rpa3 (ENSJJAG00000005379) #13 Mios (ENSJJAG00000020004) #14 Col28a1 (ENSJJAG00000022460) #16 ENSJJAG00000024015 #17 Asns (ENSJJAG00000011697) #18 ENSJJAG00000011602 Tac1 (ENSJJAG00000013765) #19 Sdhaf3 (ENSJJAG00000008045) #20 Dlx5 (ENSJJAG00000021396) #22 Dlx6 (ENSJJAG00000009741) #23 ENSJJAG00000021424 Sem1 (ENSJJAG00000021778) #24 Slc25a13 (ENSJJAG00000013214) #25 Dync1i1 (ENSJJAG00000005705) #28 Pdk4 (ENSJJAG00000006344) #29 Asb4 (ENSJJAG00000014914) #30 Pon2 (ENSJJAG00000014340) #31 Pon3 (ENSJJAG00000014617) #32 Pon1 (ENSJJAG00000019417) #33 Ppp1r9a (ENSJJAG00000014236) #34 ENSJJAG00000004763 Peg10 (ENSJJAG00000011361) #35 Sgce (ENSJJAG00000017688) #36 Casd1 (ENSJJAG00000013202) #37 Kangaroo rat MODERN SPECIES 541 ENSDORG00000025132 Sdhaf3 (ENSDORG00000026031) #20 Dlx5 (ENSDORG00000009583) #22 ENSDORG00000009580 #23 Sem1 (ENSDORG00000000070) #24 Slc25a13 (ENSDORG00000013071) #25 Dync1i1 (ENSDORG00000013069) #28 Pdk4 (ENSDORG00000014682) #29 Asb4 (ENSDORG00000014681) #30 Pon2 (ENSDORG00000014680) #31 Pon3 (ENSDORG00000014679) #32 Pon1 (ENSDORG00000013493) #33 Ppp1r9a (ENSDORG00000013490) #34 Peg10 (ENSDORG00000008758) #35 Sgce (ENSDORG00000008753) #36 Casd1 (ENSDORG00000008747) #37 Lagomorpha ANCESTRAL SPECIES 50 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Pika MODERN SPECIES 14 DLX5 (ENSOPRG00000001891) #22 Rabbit MODERN SPECIES 1 ENSOCUG00000035586 NXPH1 (ENSOCUG00000012983) ENSOCUG00000027084 ICA1 (ENSOCUG00000016815) #8 ENSOCUG00000016806 #9 UMAD1 (ENSOCUG00000035573) #12 ENSOCUG00000034765 RPA3 (ENSOCUG00000000467) #13 MIOS (ENSOCUG00000000466) #14 ENSOCUG00000000464 COL28A1 (ENSOCUG00000024805) #16 ENSOCUG00000026002 #17 ASNS (ENSOCUG00000022945) #18 ENSOCUG00000006182 #19 ENSOCUG00000015296 #20 DLX5 (ENSOCUG00000008599) #22 DLX6 (ENSOCUG00000008609) #23 ENSOCUG00000025551 ENSOCUG00000026246 SLC25A13 (ENSOCUG00000009953) #25 DYNC1I1 (ENSOCUG00000012213) #28 ENSOCUG00000025405 PDK4 (ENSOCUG00000017120) #29 ASB4 (ENSOCUG00000017113) #30 PON2 (ENSOCUG00000002014) #31 PON3 (ENSOCUG00000033613) #32 PON1 (ENSOCUG00000005136) #33 PPP1R9A (ENSOCUG00000005128) #34 ENSOCUG00000027535 #35 SGCE (ENSOCUG00000012309) #36 CASD1 (ENSOCUG00000012292) #37 Tree shrew MODERN SPECIES 2889 SDHAF3 (ENSTBEG00000006332) #20 DLX5 (ENSTBEG00000006090) #22 DLX6 (ENSTBEG00000005608) #23 Primates ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Mouse lemur MODERN SPECIES 2 PHF14 (ENSMICG00000014004) ENSMICG00000013999 ENSMICG00000047415 NXPH1 (ENSMICG00000017518) ICA1 (ENSMICG00000017517) #8 GLCCI1 (ENSMICG00000017516) #9 UMAD1 (ENSMICG00000035355) #12 RPA3 (ENSMICG00000000741) #13 MIOS (ENSMICG00000017738) #14 COL28A1 (ENSMICG00000032566) #16 C1GALT1 (ENSMICG00000011894) #17 ASNS (ENSMICG00000016357) #18 TAC1 (ENSMICG00000033534) #19 ENSMICG00000028247 ENSMICG00000036645 DLX5 (ENSMICG00000035433) #22 ENSMICG00000047116 DLX6 (ENSMICG00000014432) #23 ENSMICG00000037893 SEM1 (ENSMICG00000008928) #24 SLC25A13 (ENSMICG00000008911) #25 DYNC1I1 (ENSMICG00000008899) #28 PDK4 (ENSMICG00000005753) #29 ASB4 (ENSMICG00000005750) #30 PON2 (ENSMICG00000026757) #31 PON3 (ENSMICG00000005738) #32 PON1 (ENSMICG00000005724) #33 PPP1R9A (ENSMICG00000026651) #34 PEG10 (ENSMICG00000001469) #35 SGCE (ENSMICG00000001463) #36 CASD1 (ENSMICG00000034673) #37 Lemuriformes_a ANCESTRAL SPECIES 91 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Greater bamboo lemur MODERN SPECIES 91 NXPH1 (ENSPSMG00000007880) ICA1 (ENSPSMG00000008028) #8 GLCCI1 (ENSPSMG00000008125) #9 UMAD1 (ENSPSMG00000008140) #12 RPA3 (ENSPSMG00000008161) #13 MIOS (ENSPSMG00000008192) #14 COL28A1 (ENSPSMG00000008223) #16 C1GALT1 (ENSPSMG00000008239) #17 ASNS (ENSPSMG00000008375) #18 TAC1 (ENSPSMG00000008520) #19 ENSPSMG00000008537 DLX5 (ENSPSMG00000008549) #22 DLX6 (ENSPSMG00000008565) #23 ENSPSMG00000008588 SEM1 (ENSPSMG00000008611) #24 SLC25A13 (ENSPSMG00000008670) #25 DYNC1I1 (ENSPSMG00000008843) #28 PDK4 (ENSPSMG00000009023) #29 ASB4 (ENSPSMG00000009059) #30 PON2 (ENSPSMG00000009150) #31 PON3 (ENSPSMG00000009234) #32 PON1 (ENSPSMG00000009242) #33 PPP1R9A (ENSPSMG00000009393) #34 PEG10 (ENSPSMG00000009482) #35 SGCE (ENSPSMG00000009934) #36 CASD1 (ENSPSMG00000010248) #37 COL1A2 (ENSPSMG00000010279) Coquerels sifaka MODERN SPECIES 83 ENSPCOG00000018675 NXPH1 (ENSPCOG00000018464) ICA1 (ENSPCOG00000003590) #8 GLCCI1 (ENSPCOG00000008498) #9 UMAD1 (ENSPCOG00000016044) #12 RPA3 (ENSPCOG00000022659) #13 MIOS (ENSPCOG00000011418) #14 COL28A1 (ENSPCOG00000022435) #16 ENSPCOG00000018949 C1GALT1 (ENSPCOG00000015839) #17 ENSPCOG00000025256 #18 TAC1 (ENSPCOG00000021374) #19 ENSPCOG00000016090 #20 DLX5 (ENSPCOG00000024882) #22 DLX6 (ENSPCOG00000018676) #23 ENSPCOG00000022335 ENSPCOG00000018050 ENSPCOG00000025433 SLC25A13 (ENSPCOG00000021703) #25 DYNC1I1 (ENSPCOG00000018842) #28 PDK4 (ENSPCOG00000015783) #29 ASB4 (ENSPCOG00000024006) #30 PON2 (ENSPCOG00000023699) #31 PON3 (ENSPCOG00000026838) #32 PON1 (ENSPCOG00000018614) #33 PPP1R9A (ENSPCOG00000026221) #34 ENSPCOG00000023235 PEG10 (ENSPCOG00000017433) #35 SGCE (ENSPCOG00000024844) #36 Bushbaby MODERN SPECIES 120 PHF14 (ENSOGAG00000000467) ENSOGAG00000000358 ENSOGAG00000026515 ENSOGAG00000004543 NXPH1 (ENSOGAG00000007543) ICA1 (ENSOGAG00000000042) #8 GLCCI1 (ENSOGAG00000000041) #9 ENSOGAG00000001018 #13 MIOS (ENSOGAG00000008217) #14 COL28A1 (ENSOGAG00000030386) #16 ENSOGAG00000012847 #17 ASNS (ENSOGAG00000002404) #18 TAC1 (ENSOGAG00000006461) #19 ENSOGAG00000026923 ENSOGAG00000009141 DLX5 (ENSOGAG00000034605) #22 DLX6 (ENSOGAG00000014300) #23 ENSOGAG00000012040 SLC25A13 (ENSOGAG00000004654) #25 DYNC1I1 (ENSOGAG00000004652) #28 PDK4 (ENSOGAG00000008470) #29 ASB4 (ENSOGAG00000008468) #30 PON2 (ENSOGAG00000008461) #31 PON3 (ENSOGAG00000008457) #32 PON1 (ENSOGAG00000008453) #33 PPP1R9A (ENSOGAG00000008450) #34 ENSOGAG00000031169 #35 SGCE (ENSOGAG00000012026) #36 CASD1 (ENSOGAG00000012017) #37 COL1A2 (ENSOGAG00000005970) BET1 (ENSOGAG00000005067) Haplorrhini ANCESTRAL SPECIES 8 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Tarsier MODERN SPECIES 5722 SDHAF3 (ENSTSYG00000029415) DLX5 (ENSTSYG00000010539) #22 DLX6 (ENSTSYG00000032196) #23 Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000154268.f.o ENSGT00940000154268.f.p.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029.u #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994.u #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Hominidae ANCESTRAL SPECIES 11 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00940000154268.f.p.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029.u #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00390000001994.u #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00940000158690 ENSGT00390000017961 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT00940000153560.b.b.a ENSGT00510000048486.g.a ENSGT00510000047886.a ENSGT00940000161824 ENSGT00940000158475 ENSGT00940000161875.c.b ENSGT00390000004713.d.a ENSGT00390000001994.u #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538.ab #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000158690 ENSGT00390000017961 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT00940000153560.b.b.a ENSGT00510000048486.g.a ENSGT00510000047886.a ENSGT00940000161824 ENSGT00940000158475 ENSGT00940000161875.c.b ENSGT00390000004713.d.a ENSGT00390000001994.u #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538.ab #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Pan ANCESTRAL SPECIES 13 ENSGT01050000244891.B ENSGT00940000158690 ENSGT00390000017961 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a ENSGT00940000153560.b.b.a ENSGT00510000048486.g.a ENSGT00510000047886.a ENSGT00940000161824 ENSGT00940000158475 ENSGT00940000161875.c.b ENSGT00390000004713.d.a ENSGT00390000001994.u #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538.ab #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Bonobo MODERN SPECIES 20 ENSPPAG00000032160 KPNA7 (ENSPPAG00000040756) SMURF1 (ENSPPAG00000031727) TRRAP (ENSPPAG00000036292) TMEM130 (ENSPPAG00000016661) ENSPPAG00000032935 BAIAP2L1 (ENSPPAG00000037144) ENSPPAG00000031565 TECPR1 (ENSPPAG00000036532) BHLHA15 (ENSPPAG00000038305) LMTK2 (ENSPPAG00000032735) ENSPPAG00000027488 ASNS (ENSPPAG00000033201) #18 TAC1 (ENSPPAG00000033152) #19 SDHAF3 (ENSPPAG00000037725) #20 DLX5 (ENSPPAG00000031068) #22 ENSPPAG00000030516 #23 ENSPPAG00000005986 ENSPPAG00000043520 ENSPPAG00000036367 SLC25A13 (ENSPPAG00000035337) #25 DYNC1I1 (ENSPPAG00000043387) #28 PDK4 (ENSPPAG00000027188) #29 ASB4 (ENSPPAG00000042126) #30 PON2 (ENSPPAG00000028759) #31 PON3 (ENSPPAG00000032766) #32 PON1 (ENSPPAG00000035549) #33 PPP1R9A (ENSPPAG00000041301) #34 PEG10 (ENSPPAG00000030053) #35 ENSPPAG00000041811 ENSPPAG00000040463 Chimpanzee MODERN SPECIES 20 SMURF1 (ENSPTRG00000019444) TRRAP (ENSPTRG00000019442) TMEM130 (ENSPTRG00000045055) NPTX2 (ENSPTRG00000019440) ENSPTRG00000049708 BAIAP2L1 (ENSPTRG00000019438) BRI3 (ENSPTRG00000019436) TECPR1 (ENSPTRG00000028478) BHLHA15 (ENSPTRG00000019434) LMTK2 (ENSPTRG00000019433) OCM2 (ENSPTRG00000019432) ENSPTRG00000046532 ASNS (ENSPTRG00000019429) #18 TAC1 (ENSPTRG00000019428) #19 SDHAF3 (ENSPTRG00000019427) #20 DLX5 (ENSPTRG00000019426) #22 DLX6 (ENSPTRG00000019425) #23 ENSPTRG00000046969 ENSPTRG00000019424 ENSPTRG00000046820 SLC25A13 (ENSPTRG00000019423) #25 DYNC1I1 (ENSPTRG00000019422) #28 PDK4 (ENSPTRG00000019421) #29 ASB4 (ENSPTRG00000019420) #30 PON2 (ENSPTRG00000019419) #31 PON3 (ENSPTRG00000049985) #32 PON1 (ENSPTRG00000019417) #33 PPP1R9A (ENSPTRG00000047956) #34 ENSPTRG00000045048 PEG10 (ENSPTRG00000023648) #35 SGCE (ENSPTRG00000019411) #36 Human MODERN SPECIES 19 ENSG00000284292 KPNA7 (ENSG00000185467) SMURF1 (ENSG00000198742) TRRAP (ENSG00000196367) TMEM130 (ENSG00000166448) NPTX2 (ENSG00000106236) BAIAP2L1 (ENSG00000006453) BRI3 (ENSG00000164713) TECPR1 (ENSG00000205356) BHLHA15 (ENSG00000180535) LMTK2 (ENSG00000164715) OCM2 (ENSG00000135175) ASNS (ENSG00000070669) #18 TAC1 (ENSG00000006128) #19 SDHAF3 (ENSG00000196636) #20 DLX5 (ENSG00000105880) #22 DLX6 (ENSG00000006377) #23 SEM1 (ENSG00000127922) #24 SLC25A13 (ENSG00000004864) #25 DYNC1I1 (ENSG00000158560) #28 PDK4 (ENSG00000004799) #29 ASB4 (ENSG00000005981) #30 PON2 (ENSG00000105854) #31 PON3 (ENSG00000105852) #32 PON1 (ENSG00000005421) #33 PPP1R9A (ENSG00000158528) #34 PEG10 (ENSG00000242265) #35 SGCE (ENSG00000127990) #36 CASD1 (ENSG00000127995) #37 COL1A2 (ENSG00000164692) BET1 (ENSG00000105829) Gorilla MODERN SPECIES 20 KPNA7 (ENSGGOG00000000414) SMURF1 (ENSGGOG00000011481) TRRAP (ENSGGOG00000002928) TMEM130 (ENSGGOG00000016665) NPTX2 (ENSGGOG00000014713) ENSGGOG00000023648 BAIAP2L1 (ENSGGOG00000022920) ENSGGOG00000009646 TECPR1 (ENSGGOG00000003065) LMTK2 (ENSGGOG00000003052) OCM2 (ENSGGOG00000022595) ENSGGOG00000038206 ASNS (ENSGGOG00000005662) #18 TAC1 (ENSGGOG00000014091) #19 ENSGGOG00000014829 DLX5 (ENSGGOG00000004399) #22 DLX6 (ENSGGOG00000004398) #23 ENSGGOG00000043164 ENSGGOG00000023289 ENSGGOG00000000042 SLC25A13 (ENSGGOG00000005803) #25 DYNC1I1 (ENSGGOG00000000228) #28 PDK4 (ENSGGOG00000002467) #29 ASB4 (ENSGGOG00000006509) #30 ENSGGOG00000022016 #31 ENSGGOG00000025353 #31 PON3 (ENSGGOG00000013258) #32 PON1 (ENSGGOG00000004746) #33 PPP1R9A (ENSGGOG00000040320) #34 ENSGGOG00000028270 PEG10 (ENSGGOG00000040792) #35 Orangutan MODERN SPECIES 20 TMEM106B (ENSPPYG00000017777) THSD7A (ENSPPYG00000017778) PHF14 (ENSPPYG00000017779) ENSPPYG00000030557 NXPH1 (ENSPPYG00000017782) ICA1 (ENSPPYG00000017783) #8 GLCCI1 (ENSPPYG00000017784) #9 UMAD1 (ENSPPYG00000029638) #12 RPA3 (ENSPPYG00000030236) #13 MIOS (ENSPPYG00000017788) #14 COL28A1 (ENSPPYG00000017789) #16 C1GALT1 (ENSPPYG00000030593) #17 ASNS (ENSPPYG00000017790) #18 TAC1 (ENSPPYG00000017791) #19 SDHAF3 (ENSPPYG00000017792) #20 DLX5 (ENSPPYG00000017793) #22 DLX6 (ENSPPYG00000017794) #23 ENSPPYG00000017795 ENSPPYG00000017796 SLC25A13 (ENSPPYG00000017797) #25 DYNC1I1 (ENSPPYG00000017798) #28 PDK4 (ENSPPYG00000017799) #29 ASB4 (ENSPPYG00000017801) #30 PON2 (ENSPPYG00000017802) #31 PON3 (ENSPPYG00000017803) #32 PON1 (ENSPPYG00000017804) #33 PPP1R9A (ENSPPYG00000017805) #34 PEG10 (ENSPPYG00000029380) #35 SGCE (ENSPPYG00000017807) #36 CASD1 (ENSPPYG00000017808) #37 COL1A2 (ENSPPYG00000017809) Gibbon MODERN SPECIES 1 ENSNLEG00000033241 ENSNLEG00000032207 NXPH1 (ENSNLEG00000016182) ICA1 (ENSNLEG00000016162) #8 ENSNLEG00000016158 #9 ENSNLEG00000035067 UMAD1 (ENSNLEG00000016155) #12 RPA3 (ENSNLEG00000033298) #13 MIOS (ENSNLEG00000016134) #14 COL28A1 (ENSNLEG00000016093) #16 C1GALT1 (ENSNLEG00000016087) #17 ENSNLEG00000033587 ASNS (ENSNLEG00000016044) #18 TAC1 (ENSNLEG00000016015) #19 SDHAF3 (ENSNLEG00000016014) #20 ENSNLEG00000016010 #22 DLX6 (ENSNLEG00000016008) #23 ENSNLEG00000032740 ENSNLEG00000016002 ENSNLEG00000015998 SLC25A13 (ENSNLEG00000015945) #25 DYNC1I1 (ENSNLEG00000015889) #28 PDK4 (ENSNLEG00000015859) #29 ASB4 (ENSNLEG00000015854) #30 PON2 (ENSNLEG00000015782) #31 PON3 (ENSNLEG00000015766) #32 PON1 (ENSNLEG00000015705) #33 PPP1R9A (ENSNLEG00000015622) #34 ENSNLEG00000030717 PEG10 (ENSNLEG00000015612) #35 SGCE (ENSNLEG00000015565) #36 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Drill MODERN SPECIES 472 ICA1 (ENSMLEG00000044079) #8 GLCCI1 (ENSMLEG00000040012) #9 UMAD1 (ENSMLEG00000042525) #12 RPA3 (ENSMLEG00000036302) #13 MIOS (ENSMLEG00000037819) #14 COL28A1 (ENSMLEG00000015407) #16 C1GALT1 (ENSMLEG00000044453) #17 ENSMLEG00000032398 ASNS (ENSMLEG00000028862) #18 TAC1 (ENSMLEG00000040054) #19 ENSMLEG00000017301 SDHAF3 (ENSMLEG00000037669) #20 DLX5 (ENSMLEG00000036746) #22 DLX6 (ENSMLEG00000025971) #23 ENSMLEG00000039568 ENSMLEG00000036598 ENSMLEG00000033727 SLC25A13 (ENSMLEG00000038932) #25 DYNC1I1 (ENSMLEG00000042478) #28 PDK4 (ENSMLEG00000037032) #29 ASB4 (ENSMLEG00000036931) #30 PON2 (ENSMLEG00000027200) #31 PON3 (ENSMLEG00000036159) #32 PON1 (ENSMLEG00000035189) #33 PPP1R9A (ENSMLEG00000043621) #34 PEG10 (ENSMLEG00000035418) #35 SGCE (ENSMLEG00000035862) #36 CASD1 (ENSMLEG00000041290) #37 Sooty mangabey MODERN SPECIES 185 NXPH1 (ENSCATG00000037000) ICA1 (ENSCATG00000043201) #8 GLCCI1 (ENSCATG00000044892) #9 ENSCATG00000030314 UMAD1 (ENSCATG00000033366) #12 RPA3 (ENSCATG00000028204) #13 MIOS (ENSCATG00000011011) #14 ENSCATG00000001666 COL28A1 (ENSCATG00000031059) #16 C1GALT1 (ENSCATG00000030704) #17 ENSCATG00000043335 ASNS (ENSCATG00000038317) #18 TAC1 (ENSCATG00000034795) #19 ENSCATG00000043998 ENSCATG00000032188 DLX5 (ENSCATG00000044853) #22 DLX6 (ENSCATG00000036157) #23 ENSCATG00000041545 ENSCATG00000014825 ENSCATG00000037610 SLC25A13 (ENSCATG00000029550) #25 DYNC1I1 (ENSCATG00000037835) #28 PDK4 (ENSCATG00000031905) #29 ASB4 (ENSCATG00000029891) #30 PON2 (ENSCATG00000030239) #31 PON3 (ENSCATG00000033359) #32 ENSCATG00000039956 PON1 (ENSCATG00000034334) #33 PPP1R9A (ENSCATG00000039595) #34 PEG10 (ENSCATG00000012637) #35 SGCE (ENSCATG00000003182) #36 Olive baboon MODERN SPECIES 14 ENSPANG00000049328 NXPH1 (ENSPANG00000010257) ICA1 (ENSPANG00000012997) #8 GLCCI1 (ENSPANG00000005680) #9 UMAD1 (ENSPANG00000004767) #12 ENSPANG00000044583 RPA3 (ENSPANG00000050012) #13 MIOS (ENSPANG00000022010) #14 COL28A1 (ENSPANG00000022688) #16 C1GALT1 (ENSPANG00000003401) #17 ENSPANG00000045543 ASNS (ENSPANG00000020860) #18 TAC1 (ENSPANG00000005012) #19 ENSPANG00000040154 ENSPANG00000006297 DLX5 (ENSPANG00000039520) #22 DLX6 (ENSPANG00000045531) #23 ENSPANG00000037595 ENSPANG00000006248 ENSPANG00000016025 ENSPANG00000048858 SLC25A13 (ENSPANG00000000583) #25 DYNC1I1 (ENSPANG00000012325) #28 PDK4 (ENSPANG00000005011) #29 ASB4 (ENSPANG00000017487) #30 PON2 (ENSPANG00000005678) #31 PON1 (ENSPANG00000008433) #33 PPP1R9A (ENSPANG00000005010) #34 PEG10 (ENSPANG00000023893) #35 SGCE (ENSPANG00000008432) #36 CASD1 (ENSPANG00000005677) #37 Macaca ANCESTRAL SPECIES 3 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155405.kb ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000008610.a.b.a.b ENSGT00510000046985.h.b.a.b ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Macaca_a ANCESTRAL SPECIES 7 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000008610.a.b.a.b ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 Crab-eating macaque MODERN SPECIES 13 NXPH1 (ENSMFAG00000032515) ICA1 (ENSMFAG00000046093) #8 GLCCI1 (ENSMFAG00000038435) #9 UMAD1 (ENSMFAG00000052878) #12 ENSMFAG00000042056 #13 MIOS (ENSMFAG00000034560) #14 COL28A1 (ENSMFAG00000000186) #16 ENSMFAG00000053535 C1GALT1 (ENSMFAG00000031532) #17 ENSMFAG00000055818 ASNS (ENSMFAG00000041092) #18 TAC1 (ENSMFAG00000000287) #19 ENSMFAG00000057765 ENSMFAG00000046006 ENSMFAG00000030531 #20 DLX5 (ENSMFAG00000035900) #22 DLX6 (ENSMFAG00000048863) #23 ENSMFAG00000001022 ENSMFAG00000045122 SLC25A13 (ENSMFAG00000037896) #25 ENSMFAG00000007583 DYNC1I1 (ENSMFAG00000000094) #28 PDK4 (ENSMFAG00000035180) #29 ASB4 (ENSMFAG00000041748) #30 PON2 (ENSMFAG00000001162) #31 PON3 (ENSMFAG00000038783) #32 PON1 (ENSMFAG00000035691) #33 ENSMFAG00000055174 ENSMFAG00000062513 PPP1R9A (ENSMFAG00000034343) #34 PEG10 (ENSMFAG00000045560) #35 Rhesus MODERN SPECIES 13 ENSMMUG00000063606 PHF14 (ENSMMUG00000020895) NDUFA4 (ENSMMUG00000020894) ENSMMUG00000053010 NXPH1 (ENSMMUG00000009711) ICA1 (ENSMMUG00000005435) #8 GLCCI1 (ENSMMUG00000045449) #9 UMAD1 (ENSMMUG00000042110) #12 RPA3 (ENSMMUG00000000854) #13 MIOS (ENSMMUG00000000853) #14 COL28A1 (ENSMMUG00000040123) #16 C1GALT1 (ENSMMUG00000054913) #17 ASNS (ENSMMUG00000019157) #18 TAC1 (ENSMMUG00000014823) #19 SDHAF3 (ENSMMUG00000014920) #20 DLX5 (ENSMMUG00000054481) #22 DLX6 (ENSMMUG00000049169) #23 ENSMMUG00000055860 SEM1 (ENSMMUG00000004127) #24 ENSMMUG00000006974 SLC25A13 (ENSMMUG00000005250) #25 DYNC1I1 (ENSMMUG00000005915) #28 PDK4 (ENSMMUG00000021389) #29 ASB4 (ENSMMUG00000008016) #30 PON2 (ENSMMUG00000008014) #31 PON3 (ENSMMUG00000008013) #32 PON1 (ENSMMUG00000008011) #33 PPP1R9A (ENSMMUG00000008008) #34 ENSMMUG00000056378 ENSMMUG00000053116 ##35 ENSMMUG00000032524 #35 Pig-tailed macaque MODERN SPECIES 534 ENSMNEG00000029668 NXPH1 (ENSMNEG00000039744) ICA1 (ENSMNEG00000044278) #8 GLCCI1 (ENSMNEG00000040369) #9 ENSMNEG00000032658 UMAD1 (ENSMNEG00000044071) #12 RPA3 (ENSMNEG00000044584) #13 MIOS (ENSMNEG00000036023) #14 COL28A1 (ENSMNEG00000035662) #16 C1GALT1 (ENSMNEG00000029681) #17 ENSMNEG00000031471 ASNS (ENSMNEG00000043217) #18 TAC1 (ENSMNEG00000040665) #19 ENSMNEG00000030799 ENSMNEG00000031425 DLX5 (ENSMNEG00000021136) #22 DLX6 (ENSMNEG00000041272) #23 ENSMNEG00000029391 ENSMNEG00000045375 ENSMNEG00000045345 SLC25A13 (ENSMNEG00000031032) #25 DYNC1I1 (ENSMNEG00000040261) #28 PDK4 (ENSMNEG00000042419) #29 ASB4 (ENSMNEG00000034621) #30 PON2 (ENSMNEG00000037066) #31 PON1 (ENSMNEG00000041009) #33 PPP1R9A (ENSMNEG00000036491) #34 PEG10 (ENSMNEG00000037924) #35 SGCE (ENSMNEG00000044499) #36 CASD1 (ENSMNEG00000043682) #37 COL1A2 (ENSMNEG00000032242) Vervet Monkey MODERN SPECIES 13 THSD7A (ENSCSAG00000013288) PHF14 (ENSCSAG00000013274) ENSCSAG00000019118 NDUFA4 (ENSCSAG00000013267) NXPH1 (ENSCSAG00000019119) ICA1 (ENSCSAG00000013228) #8 GLCCI1 (ENSCSAG00000013152) #9 UMAD1 (ENSCSAG00000013129) #12 RPA3 (ENSCSAG00000013124) #13 MIOS (ENSCSAG00000013106) #14 COL28A1 (ENSCSAG00000013070) #16 C1GALT1 (ENSCSAG00000013042) #17 ASNS (ENSCSAG00000013037) #18 TAC1 (ENSCSAG00000013031) #19 ENSCSAG00000013025 DLX5 (ENSCSAG00000013019) #22 DLX6 (ENSCSAG00000013014) #23 SEM1 (ENSCSAG00000013008) #24 ENSCSAG00000013000 SLC25A13 (ENSCSAG00000012995) #25 DYNC1I1 (ENSCSAG00000012984) #28 PDK4 (ENSCSAG00000012972) #29 ASB4 (ENSCSAG00000012965) #30 PON2 (ENSCSAG00000012956) #31 PON3 (ENSCSAG00000012950) #32 PON1 (ENSCSAG00000012943) #33 PPP1R9A (ENSCSAG00000012919) #34 ENSCSAG00000019120 #35 SGCE (ENSCSAG00000012803) #36 CASD1 (ENSCSAG00000012791) #37 COL1A2 (ENSCSAG00000012769) Rhinopithecus ANCESTRAL SPECIES 336 ENSGT00910000146851.a.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000.u #17 ENSGT00760000119441.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 Black snub-nosed monkey MODERN SPECIES 1452 ASNS (ENSRBIG00000034312) #18 TAC1 (ENSRBIG00000040521) #19 ENSRBIG00000039526 DLX5 (ENSRBIG00000009903) #22 ENSRBIG00000014036 DLX6 (ENSRBIG00000000080) #23 ENSRBIG00000041095 ENSRBIG00000040487 ENSRBIG00000001757 ENSRBIG00000036051 SLC25A13 (ENSRBIG00000031676) #25 DYNC1I1 (ENSRBIG00000039059) #28 PDK4 (ENSRBIG00000041524) #29 ASB4 (ENSRBIG00000042053) #30 PON2 (ENSRBIG00000033009) #31 PON3 (ENSRBIG00000042185) #32 PON1 (ENSRBIG00000036471) #33 ENSRBIG00000042535 PPP1R9A (ENSRBIG00000030177) #34 Golden snub-nosed monkey MODERN SPECIES 1072 ENSRROG00000030088 DLX5 (ENSRROG00000032350) #22 DLX6 (ENSRROG00000034322) #23 ENSRROG00000021655 Platyrrhini ANCESTRAL SPECIES 10 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.i.a.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Cebidae ANCESTRAL SPECIES 9 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.i.a.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Marmoset MODERN SPECIES 20 ENSCJAG00000070029 ENSCJAG00000086236 ICA1 (ENSCJAG00000000720) #8 GLCCI1 (ENSCJAG00000047899) #9 UMAD1 (ENSCJAG00000087186) #12 ENSCJAG00000083800 RPA3 (ENSCJAG00000085113) #13 MIOS (ENSCJAG00000000686) #14 COL28A1 (ENSCJAG00000000636) #16 C1GALT1 (ENSCJAG00000057327) #17 ENSCJAG00000082426 ASNS (ENSCJAG00000000618) #18 ENSCJAG00000068961 #19 ENSCJAG00000085680 SDHAF3 (ENSCJAG00000042876) #20 DLX5 (ENSCJAG00000000589) #22 DLX6 (ENSCJAG00000085344) #23 ENSCJAG00000076106 ENSCJAG00000075240 ENSCJAG00000080818 ENSCJAG00000043666 ENSCJAG00000076866 ENSCJAG00000042685 SLC25A13 (ENSCJAG00000000554) #25 DYNC1I1 (ENSCJAG00000000528) #28 ENSCJAG00000084017 PDK4 (ENSCJAG00000047805) #29 ASB4 (ENSCJAG00000013280) #30 PON2 (ENSCJAG00000013295) #31 PON3 (ENSCJAG00000045831) #32 PPP1R9A (ENSCJAG00000013400) #34 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.i.a.a.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029.w #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00940000155984.b ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Bolivian squirrel monkey MODERN SPECIES 44 ENSSBOG00000015022 NXPH1 (ENSSBOG00000033774) ICA1 (ENSSBOG00000031664) #8 GLCCI1 (ENSSBOG00000032440) #9 UMAD1 (ENSSBOG00000029436) #12 RPA3 (ENSSBOG00000019538) #13 ENSSBOG00000027188 MIOS (ENSSBOG00000017338) #14 COL28A1 (ENSSBOG00000035682) #16 ENSSBOG00000032452 C1GALT1 (ENSSBOG00000026512) #17 ENSSBOG00000019705 ASNS (ENSSBOG00000031816) #18 TAC1 (ENSSBOG00000031415) #19 SDHAF3 (ENSSBOG00000031188) #20 DLX5 (ENSSBOG00000032115) #22 ENSSBOG00000026742 DLX6 (ENSSBOG00000020606) #23 ENSSBOG00000033289 ENSSBOG00000034946 ENSSBOG00000031330 ENSSBOG00000035070 SLC25A13 (ENSSBOG00000035203) #25 DYNC1I1 (ENSSBOG00000033850) #28 ENSSBOG00000032883 PDK4 (ENSSBOG00000029811) #29 ASB4 (ENSSBOG00000022820) #30 PON2 (ENSSBOG00000029443) #31 PON3 (ENSSBOG00000011528) #32 PON1 (ENSSBOG00000035653) #33 PPP1R9A (ENSSBOG00000022677) #34 Capuchin MODERN SPECIES 37 ENSCCAG00000007645 NXPH1 (ENSCCAG00000001523) ICA1 (ENSCCAG00000024119) #8 GLCCI1 (ENSCCAG00000021860) #9 UMAD1 (ENSCCAG00000028681) #12 ENSCCAG00000025095 #13 ENSCCAG00000021943 MIOS (ENSCCAG00000033208) #14 COL28A1 (ENSCCAG00000034062) #16 C1GALT1 (ENSCCAG00000037539) #17 ENSCCAG00000008594 ENSCCAG00000032950 #18 TAC1 (ENSCCAG00000022732) #19 SDHAF3 (ENSCCAG00000029465) #20 ENSCCAG00000019570 DLX5 (ENSCCAG00000018356) #22 ENSCCAG00000007505 DLX6 (ENSCCAG00000022645) #23 ENSCCAG00000032220 ENSCCAG00000030816 ENSCCAG00000033792 #25 DYNC1I1 (ENSCCAG00000027487) #28 PDK4 (ENSCCAG00000030349) #29 ASB4 (ENSCCAG00000029647) #30 PON2 (ENSCCAG00000032651) #31 PON3 (ENSCCAG00000027557) #32 PON1 (ENSCCAG00000037019) #33 PPP1R9A (ENSCCAG00000029366) #34 PEG10 (ENSCCAG00000022728) #35 SGCE (ENSCCAG00000034233) #36 ENSCCAG00000026906 Mas night monkey MODERN SPECIES 776 THSD7A (ENSANAG00000022340) PHF14 (ENSANAG00000037061) ENSANAG00000038257 NXPH1 (ENSANAG00000021516) ICA1 (ENSANAG00000037411) #8 GLCCI1 (ENSANAG00000022639) #9 UMAD1 (ENSANAG00000035021) #12 RPA3 (ENSANAG00000021050) #13 MIOS (ENSANAG00000031901) #14 ENSANAG00000037952 COL28A1 (ENSANAG00000031546) #16 C1GALT1 (ENSANAG00000024885) #17 ENSANAG00000030964 #18 TAC1 (ENSANAG00000020783) #19 SDHAF3 (ENSANAG00000037083) #20 DLX5 (ENSANAG00000024128) #22 ENSANAG00000021116 DLX6 (ENSANAG00000003767) #23 ENSANAG00000025118 ENSANAG00000033458 ENSANAG00000036040 SLC25A13 (ENSANAG00000035481) #25 DYNC1I1 (ENSANAG00000027689) #28 PDK4 (ENSANAG00000033937) #29 ASB4 (ENSANAG00000023999) #30 PON2 (ENSANAG00000031707) #31 PON3 (ENSANAG00000023332) #32 PON1 (ENSANAG00000032641) #33 PPP1R9A (ENSANAG00000005419) #34 PEG10 (ENSANAG00000021637) #35 SGCE (ENSANAG00000021843) #36 Laurasiatheria ANCESTRAL SPECIES 22 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Suina ANCESTRAL SPECIES 15 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236.a.b ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Pig MODERN SPECIES 17 NDUFA4 (ENSSSCG00000024313) ENSSSCG00000051543 NXPH1 (ENSSSCG00000037207) ICA1 (ENSSSCG00000015346) #8 GLCCI1 (ENSSSCG00000015345) #9 UMAD1 (ENSSSCG00000036169) #12 RPA3 (ENSSSCG00000023886) #13 MIOS (ENSSSCG00000015343) #14 COL28A1 (ENSSSCG00000015342) #16 ENSSSCG00000049770 ENSSSCG00000038187 #17 ASNS (ENSSSCG00000015340) #18 TAC1 (ENSSSCG00000023592) #19 ENSSSCG00000057777 ENSSSCG00000023850 DLX5 (ENSSSCG00000038838) #22 DLX6 (ENSSSCG00000033314) #23 ENSSSCG00000047552 ENSSSCG00000015337 #24 ENSSSCG00000061895 ENSSSCG00000047863 SLC25A13 (ENSSSCG00000015336) #25 DYNC1I1 (ENSSSCG00000015335) #28 PDK4 (ENSSSCG00000015334) #29 PON2 (ENSSSCG00000015331) #31 ASB4 (ENSSSCG00000015333) #30 PON3 (ENSSSCG00000029515) #32 PON1 (ENSSSCG00000015332) #33 PPP1R9A (ENSSSCG00000015329) #34 PEG10 (ENSSSCG00000036049) #35 SGCE (ENSSSCG00000015328) #36 Chacoan peccary MODERN SPECIES 101 PHF14 (ENSCWAG00000003543) NDUFA4 (ENSCWAG00000003561) ENSCWAG00000003568 NXPH1 (ENSCWAG00000003572) ICA1 (ENSCWAG00000003594) #8 GLCCI1 (ENSCWAG00000003628) #9 UMAD1 (ENSCWAG00000003639) #12 RPA3 (ENSCWAG00000003646) #13 MIOS (ENSCWAG00000003656) #14 COL28A1 (ENSCWAG00000003705) #16 C1GALT1 (ENSCWAG00000003792) #17 ASNS (ENSCWAG00000003824) #18 TAC1 (ENSCWAG00000003905) #19 ENSCWAG00000004034 ENSCWAG00000004069 #20 DLX5 (ENSCWAG00000004090) #22 DLX6 (ENSCWAG00000004117) #23 SEM1 (ENSCWAG00000004157) #24 SLC25A13 (ENSCWAG00000004215) #25 DYNC1I1 (ENSCWAG00000004316) #28 PDK4 (ENSCWAG00000004831) #29 ASB4 (ENSCWAG00000004895) #30 PON2 (ENSCWAG00000004936) #31 PON3 (ENSCWAG00000005028) #32 PON1 (ENSCWAG00000005098) #33 PPP1R9A (ENSCWAG00000005243) #34 ENSCWAG00000006173 PEG10 (ENSCWAG00000006194) #35 SGCE (ENSCWAG00000006293) #36 CASD1 (ENSCWAG00000006679) #37 COL1A2 (ENSCWAG00000006733) Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Camelidae ANCESTRAL SPECIES 2 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Arabian camel MODERN SPECIES 33 TMEM106B (ENSCDRG00005004538) THSD7A (ENSCDRG00005004035) PHF14 (ENSCDRG00005003597) ENSCDRG00005003437 NXPH1 (ENSCDRG00005003418) ICA1 (ENSCDRG00005003204) #8 ENSCDRG00005003161 #9 UMAD1 (ENSCDRG00005003150) #12 RPA3 (ENSCDRG00005003135) #13 MIOS (ENSCDRG00005003114) #14 COL28A1 (ENSCDRG00005003074) #16 C1GALT1 (ENSCDRG00005003044) #17 ASNS (ENSCDRG00005002993) #18 TAC1 (ENSCDRG00005002949) #19 SDHAF3 (ENSCDRG00005002930) #20 DLX5 (ENSCDRG00005002916) #22 ENSCDRG00005002902 DLX6 (ENSCDRG00005002890) #23 ENSCDRG00005002860 SLC25A13 (ENSCDRG00005002791) #25 DYNC1I1 (ENSCDRG00005002752) #28 PDK4 (ENSCDRG00005002723) #29 ASB4 (ENSCDRG00005002691) #30 PON2 (ENSCDRG00005002647) #31 PON3 (ENSCDRG00005002624) #32 PON1 (ENSCDRG00005002595) #33 PPP1R9A (ENSCDRG00005002429) #34 ENSCDRG00005002362 #35 SGCE (ENSCDRG00005001555) #36 CASD1 (ENSCDRG00005001307) #37 COL1A2 (ENSCDRG00005001119) Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Cetacea ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a.w.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00940000153311.a.b.a.j.a.a ENSGT00390000004037 #37 Odontoceti ANCESTRAL SPECIES 12 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a.w.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003721.d.b.h ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00940000153311.a.b.a.j.a.a ENSGT00390000004037 #37 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a.w.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003721.d.b.h ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236.a.a ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Dolphin MODERN SPECIES 5332 DLX5 (ENSTTRG00000007603) #22 DLX6 (ENSTTRG00000007600) #23 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000153524.b.a.a ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a.w.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003721.d.b.h ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236.a.a ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a.w.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003721.d.b.h ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236.a.b ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Beluga whale MODERN SPECIES 72 THSD7A (ENSDLEG00000019254) PHF14 (ENSDLEG00000019163) NDUFA4 (ENSDLEG00000019143) NXPH1 (ENSDLEG00000019138) ICA1 (ENSDLEG00000019086) #8 GLCCI1 (ENSDLEG00000019073) #9 ENSDLEG00000019059 UMAD1 (ENSDLEG00000019054) #12 RPA3 (ENSDLEG00000019052) #13 MIOS (ENSDLEG00000019046) #14 C1GALT1 (ENSDLEG00000019036) #17 ASNS (ENSDLEG00000019032) #18 TAC1 (ENSDLEG00000019029) #19 ENSDLEG00000019024 SDHAF3 (ENSDLEG00000019017) DLX5 (ENSDLEG00000019015) #22 DLX6 (ENSDLEG00000019005) #23 ENSDLEG00000018995 SEM1 (ENSDLEG00000018983) #24 ENSDLEG00000018974 SLC25A13 (ENSDLEG00000018925) #25 DYNC1I1 (ENSDLEG00000018882) #28 PDK4 (ENSDLEG00000018866) #29 ASB4 (ENSDLEG00000018860) #30 PON2 (ENSDLEG00000018855) #31 PON3 (ENSDLEG00000018838) #32 PON1 (ENSDLEG00000018817) #33 PPP1R9A (ENSDLEG00000018752) #34 ENSDLEG00000018735 #35 SGCE (ENSDLEG00000018725) #36 CASD1 (ENSDLEG00000018711) #37 Narwhal MODERN SPECIES 306 ENSMMNG00015006863 PHF14 (ENSMMNG00015006883) ENSMMNG00015006925 NXPH1 (ENSMMNG00015006936) ICA1 (ENSMMNG00015006974) #8 GLCCI1 (ENSMMNG00015007056) #9 UMAD1 (ENSMMNG00015007081) #12 ENSMMNG00015007099 ENSMMNG00015007125 MIOS (ENSMMNG00015007154) #14 C1GALT1 (ENSMMNG00015007175) #17 ASNS (ENSMMNG00015007216) #18 TAC1 (ENSMMNG00015007275) #19 ENSMMNG00015007300 SDHAF3 (ENSMMNG00015007315) #20 DLX5 (ENSMMNG00015007328) #22 DLX6 (ENSMMNG00015007350) #23 ENSMMNG00015007364 SEM1 (ENSMMNG00015007402) #24 SLC25A13 (ENSMMNG00015007438) #25 DYNC1I1 (ENSMMNG00015007501) #28 PDK4 (ENSMMNG00015007590) #29 ASB4 (ENSMMNG00015007631) #30 PON2 (ENSMMNG00015007666) #31 PON3 (ENSMMNG00015007714) #32 PON1 (ENSMMNG00015007758) #33 PPP1R9A (ENSMMNG00015007826) #34 PEG10 (ENSMMNG00015007902) #35 SGCE (ENSMMNG00015008053) #36 CASD1 (ENSMMNG00015008247) #37 COL1A2 (ENSMMNG00015008340) Vaquita MODERN SPECIES 20 THSD7A (ENSPSNG00000007114) PHF14 (ENSPSNG00000006873) ENSPSNG00000006754 NXPH1 (ENSPSNG00000006723) ICA1 (ENSPSNG00000006670) #8 GLCCI1 (ENSPSNG00000006591) #9 ENSPSNG00000006546 UMAD1 (ENSPSNG00000006522) #12 RPA3 (ENSPSNG00000006394) #13 MIOS (ENSPSNG00000006353) #14 C1GALT1 (ENSPSNG00000006313) #17 ASNS (ENSPSNG00000006229) #18 TAC1 (ENSPSNG00000006155) #19 ENSPSNG00000006117 ENSPSNG00000006103 DLX5 (ENSPSNG00000006083) #22 DLX6 (ENSPSNG00000006068) #23 ENSPSNG00000006051 SEM1 (ENSPSNG00000006009) #24 SLC25A13 (ENSPSNG00000005922) #25 DYNC1I1 (ENSPSNG00000005871) #28 PDK4 (ENSPSNG00000005793) #29 ASB4 (ENSPSNG00000005745) #30 PON2 (ENSPSNG00000005681) #31 PON3 (ENSPSNG00000005618) #32 PPP1R9A (ENSPSNG00000005512) #34 PEG10 (ENSPSNG00000005451) #35 SGCE (ENSPSNG00000005246) #36 CASD1 (ENSPSNG00000005142) #37 COL1A2 (ENSPSNG00000005091) BET1 (ENSPSNG00000005036) Sperm whale MODERN SPECIES 16 ENSPCTG00005000703 THSD7A (ENSPCTG00005000630) PHF14 (ENSPCTG00005000457) NDUFA4 (ENSPCTG00005000370) NXPH1 (ENSPCTG00005000346) ICA1 (ENSPCTG00005000295) #8 GLCCI1 (ENSPCTG00005000236) #9 ENSPCTG00005000222 UMAD1 (ENSPCTG00005004533) #12 RPA3 (ENSPCTG00005004499) #13 MIOS (ENSPCTG00005004472) #14 C1GALT1 (ENSPCTG00005004436) #17 ASNS (ENSPCTG00005004342) #18 TAC1 (ENSPCTG00005004242) #19 SDHAF3 (ENSPCTG00005004214) #20 DLX5 (ENSPCTG00005004189) #22 DLX6 (ENSPCTG00005004174) #23 ENSPCTG00005004168 SEM1 (ENSPCTG00005004135) #24 SLC25A13 (ENSPCTG00005004115) #25 DYNC1I1 (ENSPCTG00005003996) #28 PDK4 (ENSPCTG00005003949) #29 ASB4 (ENSPCTG00005003933) #30 PON2 (ENSPCTG00005003915) #31 PON3 (ENSPCTG00005003894) #32 PPP1R9A (ENSPCTG00005003688) #34 ENSPCTG00005003606 #35 SGCE (ENSPCTG00005003355) #36 ENSPCTG00005003307 CASD1 (ENSPCTG00005003283) #37 ENSPCTG00005003272 Blue whale MODERN SPECIES 20 PHF14 (ENSBMSG00010010545) ENSBMSG00010010526 ENSBMSG00010010516 NXPH1 (ENSBMSG00010010502) ICA1 (ENSBMSG00010010462) #8 GLCCI1 (ENSBMSG00010010429) #9 ENSBMSG00010010413 UMAD1 (ENSBMSG00010010406) #12 RPA3 (ENSBMSG00010010396) #13 MIOS (ENSBMSG00010010390) #14 C1GALT1 (ENSBMSG00010010380) #17 ASNS (ENSBMSG00010010358) #18 TAC1 (ENSBMSG00010010326) #19 ENSBMSG00010010303 SDHAF3 (ENSBMSG00010010295) #20 DLX5 (ENSBMSG00010010283) #22 DLX6 (ENSBMSG00010010273) #23 ENSBMSG00010010264 SEM1 (ENSBMSG00010010239) #24 ENSBMSG00010010225 ENSBMSG00010010215 SLC25A13 (ENSBMSG00010010204) #25 DYNC1I1 (ENSBMSG00010009995) #28 PDK4 (ENSBMSG00010009933) #29 ASB4 (ENSBMSG00010009914) #30 PON2 (ENSBMSG00010009896) #31 PON3 (ENSBMSG00010009875) #32 PON1 (ENSBMSG00010009764) #33 PPP1R9A (ENSBMSG00010009585) #34 SGCE (ENSBMSG00010009381) #36 ENSBMSG00010009321 Pecora ANCESTRAL SPECIES 11 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b.b.b.b ENSGT00950000182883.a.b.a ENSGT00950000183014.f.a.h.u.a.b ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Percora_a ANCESTRAL SPECIES 11 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b.b.b.b ENSGT00950000182883.a.b.a ENSGT00950000183014.f.a.h.u.a.b ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Bovidae ANCESTRAL SPECIES 12 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00950000183014.f.a.h.v ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00960000191016 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Bovinae ANCESTRAL SPECIES 8 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b.b.a ENSGT00950000182883.a.b.a ENSGT00950000183014.f.a.h.v ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029.a.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00960000191016 ENSGT00940000162732 #24 ENSGT00390000018085.a.b.a ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Bos ANCESTRAL SPECIES 8 ENSGT00940000154268.e.b.b.a ENSGT00390000015564.s.b ENSGT00950000182883.a.b.a ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000183014.f.a.h.v ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029.a.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00960000191016 ENSGT00390000018085.a.b.a ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Bos_b ANCESTRAL SPECIES 7 ENSGT00390000015564.s.b ENSGT00950000182883.a.b.a ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000183014.f.a.h.v ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236.a.b ENSGT01090000260575 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00960000191016 ENSGT00940000154466.t ENSGT00390000018085.a.b.a ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Cow MODERN SPECIES 23 ENSBTAG00000049682 NXPH1 (ENSBTAG00000006924) ENSBTAG00000045937 ENSBTAG00000055236 ICA1 (ENSBTAG00000000799) #8 GLCCI1 (ENSBTAG00000008533) #9 UMAD1 (ENSBTAG00000047004) #12 RPA3 (ENSBTAG00000013168) #13 MIOS (ENSBTAG00000013781) #14 COL28A1 (ENSBTAG00000024420) #16 C1GALT1 (ENSBTAG00000004995) #17 ASNS (ENSBTAG00000003222) #18 TAC1 (ENSBTAG00000015356) #19 SDHAF3 (ENSBTAG00000015925) ENSBTAG00000054132 DLX5 (ENSBTAG00000018645) #22 DLX6 (ENSBTAG00000021458) #23 ENSBTAG00000053173 ENSBTAG00000020685 SEM1 (ENSBTAG00000052508) #24 ENSBTAG00000035660 SLC25A13 (ENSBTAG00000003773) #25 DYNC1I1 (ENSBTAG00000027134) #28 PDK4 (ENSBTAG00000014069) #29 ENSBTAG00000047555 ASB4 (ENSBTAG00000018185) #30 PON2 (ENSBTAG00000008361) #31 PON3 (ENSBTAG00000034645) #32 PON1 (ENSBTAG00000015654) #33 PPP1R9A (ENSBTAG00000024426) #34 PEG10 (ENSBTAG00000053735) #35 Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005017011 NXPH1 (ENSBIXG00005016983) ENSBIXG00005016894 ICA1 (ENSBIXG00005016867) #8 GLCCI1 (ENSBIXG00005016804) #9 UMAD1 (ENSBIXG00005005510) #12 RPA3 (ENSBIXG00005016720) #13 MIOS (ENSBIXG00005016685) #14 COL28A1 (ENSBIXG00005016589) #16 C1GALT1 (ENSBIXG00005016418) #17 ENSBIXG00005016397 ASNS (ENSBIXG00005016374) #18 ENSBIXG00005016310 #19 ENSBIXG00005016262 ENSBIXG00005016248 DLX5 (ENSBIXG00005016234) #22 DLX6 (ENSBIXG00005016210) #23 ENSBIXG00005016193 ENSBIXG00005016135 ENSBIXG00005007026 #24 ENSBIXG00005016067 SLC25A13 (ENSBIXG00005016053) #25 ENSBIXG00005016016 DYNC1I1 (ENSBIXG00005015981) #28 PDK4 (ENSBIXG00005015845) #29 ASB4 (ENSBIXG00005015829) #30 ENSBIXG00005015778 PON2 (ENSBIXG00005002465) #31 PON1 (ENSBIXG00005015707) #33 PPP1R9A (ENSBIXG00005007141) #34 PEG10 (ENSBIXG00005015469) #35 Bos_a ANCESTRAL SPECIES 62 ENSGT00950000182883.a.b.a ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029.a.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00960000191016 ENSGT00390000018085.a.b.a ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Domestic yak MODERN SPECIES 23 ENSBGRG00000003919 ENSBGRG00000003955 ENSBGRG00000003982 NXPH1 (ENSBGRG00000003991) ENSBGRG00000004021 ICA1 (ENSBGRG00000006607) #8 GLCCI1 (ENSBGRG00000006968) #9 MIOS (ENSBGRG00000007029) #14 RPA3 (ENSBGRG00000007219) #13 COL28A1 (ENSBGRG00000007346) #16 C1GALT1 (ENSBGRG00000007477) #17 ASNS (ENSBGRG00000007541) #18 TAC1 (ENSBGRG00000007816) #19 ENSBGRG00000007971 ENSBGRG00000007996 #20 DLX5 (ENSBGRG00000008025) #22 DLX6 (ENSBGRG00000008067) #23 ENSBGRG00000008138 ENSBGRG00000008161 ENSBGRG00000008295 ENSBGRG00000008310 SLC25A13 (ENSBGRG00000008346) #25 DYNC1I1 (ENSBGRG00000008636) #28 PDK4 (ENSBGRG00000008799) #29 ASB4 (ENSBGRG00000008948) #30 ENSBGRG00000009056 PON2 (ENSBGRG00000009075) #31 PON3 (ENSBGRG00000009298) #32 ENSBGRG00000009424 ENSBGRG00000009453 PON1 (ENSBGRG00000009473) #33 Wild yak MODERN SPECIES 53 TAC1 (ENSBMUG00000006537) #19 ENSBMUG00000006548 #20 DLX5 (ENSBMUG00000006551) #22 DLX6 (ENSBMUG00000006563) #23 ENSBMUG00000006570 ENSBMUG00000006601 #24 ENSBMUG00000006606 SLC25A13 (ENSBMUG00000006662) #25 American bison MODERN SPECIES 3058 NXPH1 (ENSBBBG00000019763) ICA1 (ENSBBBG00000005347) #8 GLCCI1 (ENSBBBG00000019699) #9 UMAD1 (ENSBBBG00000019686) #12 RPA3 (ENSBBBG00000019682) #13 MIOS (ENSBBBG00000019669) #14 COL28A1 (ENSBBBG00000019641) #16 C1GALT1 (ENSBBBG00000019593) #17 ASNS (ENSBBBG00000005315) #18 TAC1 (ENSBBBG00000019522) #19 ENSBBBG00000019491 SDHAF3 (ENSBBBG00000019488) #20 DLX5 (ENSBBBG00000009075) #22 DLX6 (ENSBBBG00000005246) #23 ENSBBBG00000019472 SEM1 (ENSBBBG00000005233) #24 ENSBBBG00000008660 SLC25A13 (ENSBBBG00000008948) #25 DYNC1I1 (ENSBBBG00000019384) #28 PDK4 (ENSBBBG00000019269) #29 ENSBBBG00000004984 ASB4 (ENSBBBG00000004982) #30 PON2 (ENSBBBG00000019245) #31 PON3 (ENSBBBG00000019221) #32 PON1 (ENSBBBG00000019206) #33 PPP1R9A (ENSBBBG00000019136) #34 PEG10 (ENSBBBG00000018993) #35 SGCE (ENSBBBG00000018966) #36 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.b.b.a.b ENSGT00950000182883.a.b.a ENSGT00950000183014.f.a.h.v ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029.a #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994.q #18 ENSGT00390000002457 #19 ENSGT00390000010029.a #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00960000191016 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Rambouillet Sheep MODERN SPECIES 20 PHF14 (ENSOARG00020001319) NDUFA4 (ENSOARG00020001248) ENSOARG00020001210 NXPH1 (ENSOARG00020001196) ENSOARG00020001186 ICA1 (ENSOARG00020001005) #8 GLCCI1 (ENSOARG00020000930) #9 UMAD1 (ENSOARG00020000913) #12 ENSOARG00020000903 #13 MIOS (ENSOARG00020000878) #14 COL28A1 (ENSOARG00020000523) #16 C1GALT1 (ENSOARG00020000380) #17 ASNS (ENSOARG00020000318) #18 TAC1 (ENSOARG00020000198) #19 SDHAF3 (ENSOARG00020000120) #20 DLX5 (ENSOARG00020021833) #22 DLX6 (ENSOARG00020021810) #23 ENSOARG00020021764 SEM1 (ENSOARG00020021699) #24 SLC25A13 (ENSOARG00020021619) #25 DYNC1I1 (ENSOARG00020021331) #28 PDK4 (ENSOARG00020021170) #29 ASB4 (ENSOARG00020021059) #30 PON2 (ENSOARG00020020867) #31 PON3 (ENSOARG00020020726) #32 PON1 (ENSOARG00020020677) #33 PPP1R9A (ENSOARG00020020218) #34 ENSOARG00020020193 PEG10 (ENSOARG00020020122) #35 SGCE (ENSOARG00020018567) #36 CASD1 (ENSOARG00020018433) #37 Goat MODERN SPECIES 23 ENSCHIG00000014929 ENSCHIG00000013651 ENSCHIG00000008770 NXPH1 (ENSCHIG00000010196) ENSCHIG00000014633 ICA1 (ENSCHIG00000025576) #8 GLCCI1 (ENSCHIG00000022941) #9 UMAD1 (ENSCHIG00000017252) #12 ENSCHIG00000023481 #13 MIOS (ENSCHIG00000011181) #14 COL28A1 (ENSCHIG00000015742) #16 C1GALT1 (ENSCHIG00000025282) #17 ENSCHIG00000013950 #18 TAC1 (ENSCHIG00000022845) #19 ENSCHIG00000008860 DLX5 (ENSCHIG00000009075) #22 DLX6 (ENSCHIG00000022329) #23 ENSCHIG00000020492 ENSCHIG00000010410 SLC25A13 (ENSCHIG00000022398) #25 DYNC1I1 (ENSCHIG00000013760) #28 ENSCHIG00000024760 #28 PDK4 (ENSCHIG00000013432) #29 ASB4 (ENSCHIG00000015322) #30 PON2 (ENSCHIG00000023025) #31 PON3 (ENSCHIG00000011355) #32 PON1 (ENSCHIG00000012757) #33 ENSCHIG00000026533 #34 ENSCHIG00000017712 ENSCHIG00000008653 #34 SGCE (ENSCHIG00000012578) #36 Siberian musk deer MODERN SPECIES 1158 ENSMMSG00000015146 NXPH1 (ENSMMSG00000015158) ENSMMSG00000015176 ICA1 (ENSMMSG00000015191) #8 GLCCI1 (ENSMMSG00000015242) #9 UMAD1 (ENSMMSG00000015274) #12 RPA3 (ENSMMSG00000015284) #13 MIOS (ENSMMSG00000015314) #14 COL28A1 (ENSMMSG00000015374) #16 C1GALT1 (ENSMMSG00000015414) #17 ASNS (ENSMMSG00000015432) #18 TAC1 (ENSMMSG00000015513) #19 ENSMMSG00000015643 ENSMMSG00000015668 ENSMMSG00000015676 #20 DLX5 (ENSMMSG00000015689) #22 ENSMMSG00000015706 #23 SEM1 (ENSMMSG00000015729) #24 SLC25A13 (ENSMMSG00000015776) #25 DYNC1I1 (ENSMMSG00000015838) #28 PDK4 (ENSMMSG00000016674) #29 ASB4 (ENSMMSG00000016724) #30 PON2 (ENSMMSG00000016826) #31 PON3 (ENSMMSG00000016879) #32 PON1 (ENSMMSG00000016965) #33 PPP1R9A (ENSMMSG00000017055) #34 ENSMMSG00000017702 #35 SGCE (ENSMMSG00000017770) #36 CASD1 (ENSMMSG00000018464) #37 COL1A2 (ENSMMSG00000018614) BET1 (ENSMMSG00000019037) Yarkand deer MODERN SPECIES 9 NXPH1 (ENSCHYG00000006108) ENSCHYG00000006079 ENSCHYG00000005872 #8 ENSCHYG00000005812 #9 ENSCHYG00000005763 #12 RPA3 (ENSCHYG00000005704) #13 MIOS (ENSCHYG00000005648) #14 ENSCHYG00000005629 COL28A1 (ENSCHYG00000005593) #16 C1GALT1 (ENSCHYG00000005547) #17 ASNS (ENSCHYG00000005413) #18 ENSCHYG00000005370 TAC1 (ENSCHYG00000005255) #19 ENSCHYG00000005224 ENSCHYG00000005190 DLX5 (ENSCHYG00000005150) #22 DLX6 (ENSCHYG00000005122) #23 SEM1 (ENSCHYG00000005072) #24 ENSCHYG00000004450 SLC25A13 (ENSCHYG00000022948) #25 DYNC1I1 (ENSCHYG00000022612) #28 PDK4 (ENSCHYG00000022505) #29 ASB4 (ENSCHYG00000022458) #30 ENSCHYG00000022429 PON2 (ENSCHYG00000022369) #31 PON3 (ENSCHYG00000022263) #32 PON1 (ENSCHYG00000022194) #33 PPP1R9A (ENSCHYG00000021788) #34 ENSCHYG00000021731 #35 ENSCHYG00000021697 #35 SGCE (ENSCHYG00000015479) #36 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 Carnivora ANCESTRAL SPECIES 15 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Canidae ANCESTRAL SPECIES 22 ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Canis_lupus ANCESTRAL SPECIES 24 ENSGT00940000158360.e ENSGT00950000182987.c.a.a.i.a.b ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029.c #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Dog MODERN SPECIES 5 VWDE (ENSCAFG00845025445) TMEM106B (ENSCAFG00845025296) ENSCAFG00845025217 THSD7A (ENSCAFG00845025032) PHF14 (ENSCAFG00845024252) NXPH1 (ENSCAFG00845023794) ICA1 (ENSCAFG00845023498) #8 GLCCI1 (ENSCAFG00845023274) #9 ENSCAFG00845023104 #12 ENSCAFG00845023019 #13 MIOS (ENSCAFG00845022762) #14 ENSCAFG00845022480 #16 ENSCAFG00845022359 #17 ASNS (ENSCAFG00845022196) #18 ENSCAFG00845022098 #19 DLX5 (ENSCAFG00845022026) #22 DLX6 (ENSCAFG00845021877) #23 ENSCAFG00845021649 ENSCAFG00845021558 SLC25A13 (ENSCAFG00845021467) #25 DYNC1I1 (ENSCAFG00845021237) #28 PDK4 (ENSCAFG00845021015) #29 ASB4 (ENSCAFG00845020937) #30 PON2 (ENSCAFG00845020811) #31 PON1 (ENSCAFG00845020697) #32 PON1 (ENSCAFG00845020626) #33 PPP1R9A (ENSCAFG00845019528) #34 PEG10 (ENSCAFG00845019307) #35 SGCE (ENSCAFG00845018808) #36 CASD1 (ENSCAFG00845018361) #37 COL1A2 (ENSCAFG00845017038) Dingo MODERN SPECIES 203 THSD7A (ENSCAFG00020010234) PHF14 (ENSCAFG00020010292) NXPH1 (ENSCAFG00020010302) ICA1 (ENSCAFG00020010319) #8 GLCCI1 (ENSCAFG00020010535) #9 UMAD1 (ENSCAFG00020010547) #12 ENSCAFG00020010550 #13 MIOS (ENSCAFG00020010551) #14 ENSCAFG00020010572 ENSCAFG00020010574 C1GALT1 (ENSCAFG00020010576) #17 ASNS (ENSCAFG00020010580) #18 TAC1 (ENSCAFG00020010587) #19 ENSCAFG00020010609 SDHAF3 (ENSCAFG00020010615) #20 DLX5 (ENSCAFG00020010625) #22 ENSCAFG00020010627 DLX6 (ENSCAFG00020010631) #23 ENSCAFG00020010643 #25 ENSCAFG00020011187 ENSCAFG00020011190 #28 ENSCAFG00020011207 #28 PDK4 (ENSCAFG00020011212) #29 PON2 (ENSCAFG00020011216) #31 PON3 (ENSCAFG00020011223) #32 PON1 (ENSCAFG00020011240) #33 PPP1R9A (ENSCAFG00020011260) #34 PEG10 (ENSCAFG00020011590) #35 SGCE (ENSCAFG00020011594) #36 CASD1 (ENSCAFG00020011601) #37 COL1A2 (ENSCAFG00020011621) Red fox MODERN SPECIES 48 ENSVVUG00000016088 ENSVVUG00000016084 ENSVVUG00000016064 NXPH1 (ENSVVUG00000016058) ICA1 (ENSVVUG00000015987) #8 ENSVVUG00000015981 #9 ENSVVUG00000015971 #12 ENSVVUG00000015968 #13 MIOS (ENSVVUG00000015960) #14 COL28A1 (ENSVVUG00000015891) #16 C1GALT1 (ENSVVUG00000015871) #17 ASNS (ENSVVUG00000015859) #18 ENSVVUG00000015848 TAC1 (ENSVVUG00000015838) #19 ENSVVUG00000015821 #20 DLX5 (ENSVVUG00000015813) #22 DLX6 (ENSVVUG00000015777) #23 ENSVVUG00000015757 ENSVVUG00000015747 SLC25A13 (ENSVVUG00000015715) #25 DYNC1I1 (ENSVVUG00000015673) #28 PDK4 (ENSVVUG00000015648) #29 ASB4 (ENSVVUG00000015642) #30 PON2 (ENSVVUG00000015637) #31 PON3 (ENSVVUG00000015625) #32 PON1 (ENSVVUG00000015624) #33 PPP1R9A (ENSVVUG00000015603) #34 ENSVVUG00000015587 #35 ENSVVUG00000015584 #35 SGCE (ENSVVUG00000015577) #36 CASD1 (ENSVVUG00000015568) #37 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Mustelinae ANCESTRAL SPECIES 46 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 American mink MODERN SPECIES 89 NXPH1 (ENSNVIG00000020111) ICA1 (ENSNVIG00000020027) #8 ENSNVIG00000020014 #9 ENSNVIG00000019979 #12 RFA3 (ENSNVIG00000019956) #13 MIO (ENSNVIG00000019915) #14 COL28A1 (ENSNVIG00000019846) #16 ENSNVIG00000019840 C1GALT1 (ENSNVIG00000019827) #17 ASNS (ENSNVIG00000019745) #18 TAC1 (ENSNVIG00000019710) #19 ENSNVIG00000019703 ACN9 (ENSNVIG00000019698) #20 DLX5 (ENSNVIG00000019679) #22 DLX6 (ENSNVIG00000019667) #23 ENSNVIG00000019656 SEM1 (ENSNVIG00000019631) #24 SLC25A13 (ENSNVIG00000019576) #25 DYNC1I1 (ENSNVIG00000019409) #28 PDK4 (ENSNVIG00000019382) #29 ASB4 (ENSNVIG00000019375) #30 PON2 (ENSNVIG00000019351) #31 PON3 (ENSNVIG00000019307) #32 PON1 (ENSNVIG00000019295) #33 PPP1R9A (ENSNVIG00000019078) #34 PEG10 (ENSNVIG00000019037) #35 SGCE (ENSNVIG00000018356) #36 CASD1 (ENSNVIG00000018302) #37 COL1A2 (ENSNVIG00000018177) Ferret MODERN SPECIES 292 NXPH1 (ENSMPUG00000001403) ICA1 (ENSMPUG00000001408) #8 GLCCI1 (ENSMPUG00000001415) #9 ENSMPUG00000001435 #13 MIOS (ENSMPUG00000001438) #14 COL28A1 (ENSMPUG00000001484) #16 C1GALT1 (ENSMPUG00000001496) #17 ASNS (ENSMPUG00000001501) #18 TAC1 (ENSMPUG00000001508) #19 SDHAF3 (ENSMPUG00000001512) #20 DLX5 (ENSMPUG00000001514) #22 DLX6 (ENSMPUG00000001519) #23 SLC25A13 (ENSMPUG00000001535) #25 DYNC1I1 (ENSMPUG00000001547) #28 PDK4 (ENSMPUG00000001556) #29 ASB4 (ENSMPUG00000001561) #30 PON2 (ENSMPUG00000001566) #31 PON3 (ENSMPUG00000001572) #32 PON1 (ENSMPUG00000001579) #33 PPP1R9A (ENSMPUG00000001584) #34 ENSMPUG00000019410 ##35 SGCE (ENSMPUG00000001594) #36 CASD1 (ENSMPUG00000001604) #37 COL1A2 (ENSMPUG00000001613) BET1 (ENSMPUG00000001630) GNG11 (ENSMPUG00000001645) Ursidae ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00940000155398.dc.a ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 Ursus ANCESTRAL SPECIES 54 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00940000155398.dc.a ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 American black bear MODERN SPECIES 1455 DLX5 (ENSUAMG00000022786) #22 ENSUAMG00000022784 DLX6 (ENSUAMG00000022783) #23 ENSUAMG00000022782 SEM1 (ENSUAMG00000022777) #24 Polar bear MODERN SPECIES 132 ENSUMAG00000021556 #13 MIOS (ENSUMAG00000021553) #14 COL28A1 (ENSUMAG00000021547) #16 C1GALT1 (ENSUMAG00000021545) #17 ASNS (ENSUMAG00000021541) #18 TAC1 (ENSUMAG00000021530) #19 SDHAF3 (ENSUMAG00000021523) #20 DLX5 (ENSUMAG00000021517) #22 ENSUMAG00000021511 DLX6 (ENSUMAG00000021509) #23 ENSUMAG00000021506 SEM1 (ENSUMAG00000021491) #24 SLC25A13 (ENSUMAG00000021484) #25 DYNC1I1 (ENSUMAG00000021477) #28 PDK4 (ENSUMAG00000021470) #29 ASB4 (ENSUMAG00000021464) #30 PON2 (ENSUMAG00000021432) #31 PON3 (ENSUMAG00000021419) #32 PON1 (ENSUMAG00000021412) #33 PPP1R9A (ENSUMAG00000021167) #34 ENSUMAG00000021109 PEG10 (ENSUMAG00000021102) #35 SGCE (ENSUMAG00000021093) #36 Giant Panda MODERN SPECIES ENSAMEG00000019235 VWDE (ENSAMEG00000009806) TMEM106B (ENSAMEG00000009789) THSD7A (ENSAMEG00000010568) PHF14 (ENSAMEG00000002497) NDUFA4 (ENSAMEG00000002493) NXPH1 (ENSAMEG00000014288) ICA1 (ENSAMEG00000016413) #8 RPA3 (ENSAMEG00000016401) #13 MIOS (ENSAMEG00000016383) #14 ENSAMEG00000016366 #16 ENSAMEG00000016360 #17 ENSAMEG00000016335 #18 TAC1 (ENSAMEG00000016330) #19 SDHAF3 (ENSAMEG00000005591) #20 DLX5 (ENSAMEG00000025315) #22 ENSAMEG00000023534 DLX6 (ENSAMEG00000030077) #23 SEM1 (ENSAMEG00000010434) #24 SLC25A13 (ENSAMEG00000010393) #25 DYNC1I1 (ENSAMEG00000010340) #28 PDK4 (ENSAMEG00000010313) #29 ASB4 (ENSAMEG00000010301) #30 PON2 (ENSAMEG00000010274) #31 PON3 (ENSAMEG00000010256) #32 PON1 (ENSAMEG00000010218) #33 PPP1R9A (ENSAMEG00000025027) #34 ENSAMEG00000028570 PEG10 (ENSAMEG00000019304) #35 SGCE (ENSAMEG00000017461) #36 CASD1 (ENSAMEG00000017482) #37 Felidae ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Panthera ANCESTRAL SPECIES 1 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Panthera_a ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.e.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00910000147039 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 lion MODERN SPECIES 2 THSD7A (ENSPLOG00000019788) PHF14 (ENSPLOG00000019605) ENSPLOG00000019529 ENSPLOG00000019496 NXPH1 (ENSPLOG00000019464) ICA1 (ENSPLOG00000019284) #8 GLCCI1 (ENSPLOG00000019253) #9 UMAD1 (ENSPLOG00000019213) #12 RPA3 (ENSPLOG00000019171) #13 MIOS (ENSPLOG00000019131) #14 COL28A1 (ENSPLOG00000018923) #16 C1GALT1 (ENSPLOG00000018883) #17 ASNS (ENSPLOG00000018770) #18 TAC1 (ENSPLOG00000018609) #19 SDHAF3 (ENSPLOG00000018540) #20 DLX5 (ENSPLOG00000018485) #22 ENSPLOG00000018456 DLX6 (ENSPLOG00000018415) #23 ENSPLOG00000018395 SEM1 (ENSPLOG00000018292) #24 SLC25A13 (ENSPLOG00000018233) #25 DYNC1I1 (ENSPLOG00000017626) #28 PDK4 (ENSPLOG00000017484) #29 ASB4 (ENSPLOG00000017377) #30 PON2 (ENSPLOG00000017185) #31 PON3 (ENSPLOG00000017038) #32 PON1 (ENSPLOG00000016943) #33 PPP1R9A (ENSPLOG00000016519) #34 PEG10 (ENSPLOG00000016403) #35 SGCE (ENSPLOG00000015060) #36 CASD1 (ENSPLOG00000014818) #37 leopard MODERN SPECIES 9 THSD7A (ENSPPRG00000003281) PHF14 (ENSPPRG00000005010) ENSPPRG00000005600 NXPH1 (ENSPPRG00000005930) ICA1 (ENSPPRG00000010134) #8 GLCCI1 (ENSPPRG00000010852) #9 UMAD1 (ENSPPRG00000011362) #12 RPA3 (ENSPPRG00000011518) #13 MIOS (ENSPPRG00000012147) #14 COL28A1 (ENSPPRG00000013113) #16 C1GALT1 (ENSPPRG00000014040) #17 ASNS (ENSPPRG00000018642) #18 TAC1 (ENSPPRG00000019181) #19 ENSPPRG00000020877 SDHAF3 (ENSPPRG00000023385) #20 DLX5 (ENSPPRG00000023013) #22 DLX6 (ENSPPRG00000022762) #23 ENSPPRG00000015965 SEM1 (ENSPPRG00000000502) #24 SLC25A13 (ENSPPRG00000001937) #25 ENSPPRG00000002150 DYNC1I1 (ENSPPRG00000006550) #28 PDK4 (ENSPPRG00000006772) #29 ASB4 (ENSPPRG00000007721) #30 PON2 (ENSPPRG00000008699) #31 PON3 (ENSPPRG00000009646) #32 PON1 (ENSPPRG00000009771) #33 PPP1R9A (ENSPPRG00000020457) #34 ENSPPRG00000000292 #35 SGCE (ENSPPRG00000002186) #36 CASD1 (ENSPPRG00000002948) #37 Tiger MODERN SPECIES 86 THSD7A (ENSPTIG00000008613) PHF14 (ENSPTIG00000013018) ENSPTIG00000016258 NXPH1 (ENSPTIG00000016592) ICA1 (ENSPTIG00000016701) #8 ENSPTIG00000020014 #9 UMAD1 (ENSPTIG00000020441) #12 RPA3 (ENSPTIG00000020731) #13 MIOS (ENSPTIG00000020989) #14 COL28A1 (ENSPTIG00000003687) #16 C1GALT1 (ENSPTIG00000009676) #17 ASNS (ENSPTIG00000010610) #18 TAC1 (ENSPTIG00000012039) #19 SDHAF3 (ENSPTIG00000014702) #20 DLX5 (ENSPTIG00000015406) #22 DLX6 (ENSPTIG00000015917) #23 ENSPTIG00000005830 SEM1 (ENSPTIG00000016399) #24 SLC25A13 (ENSPTIG00000017442) #25 ENSPTIG00000021023 #28 ENSPTIG00000003162 #28 ENSPTIG00000005690 #29 ASB4 (ENSPTIG00000007277) #30 PON2 (ENSPTIG00000007995) #31 PON3 (ENSPTIG00000010734) #32 PON1 (ENSPTIG00000013016) #33 PPP1R9A (ENSPTIG00000013264) #34 ENSPTIG00000020088 #35 SGCE (ENSPTIG00000003426) #36 CASD1 (ENSPTIG00000011670) #37 Cat MODERN SPECIES 1 TMEM106B (ENSFCAG00000045115) THSD7A (ENSFCAG00000012989) PHF14 (ENSFCAG00000032020) ENSFCAG00000039840 NXPH1 (ENSFCAG00000006670) ICA1 (ENSFCAG00000013009) #8 GLCCI1 (ENSFCAG00000044916) #9 UMAD1 (ENSFCAG00000039038) #12 RPA3 (ENSFCAG00000037352) #13 MIOS (ENSFCAG00000012070) #14 COL28A1 (ENSFCAG00000018957) #16 C1GALT1 (ENSFCAG00000029442) #17 ASNS (ENSFCAG00000022830) #18 TAC1 (ENSFCAG00000027120) #19 SDHAF3 (ENSFCAG00000023112) #20 DLX5 (ENSFCAG00000045842) #22 ENSFCAG00000033780 DLX6 (ENSFCAG00000026168) #23 ENSFCAG00000037742 SEM1 (ENSFCAG00000037589) #24 ENSFCAG00000051628 SLC25A13 (ENSFCAG00000011810) #25 DYNC1I1 (ENSFCAG00000011808) #28 PDK4 (ENSFCAG00000028642) #29 ASB4 (ENSFCAG00000009993) #30 PON2 (ENSFCAG00000031767) #31 PON3 (ENSFCAG00000008297) #32 PON1 (ENSFCAG00000019028) #33 PPP1R9A (ENSFCAG00000011043) #34 PEG10 (ENSFCAG00000041002) #35 SGCE (ENSFCAG00000026567) #36 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 ENSGT00390000004037 #37 Chiroptera ANCESTRAL SPECIES 24 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Microchiroptera ANCESTRAL SPECIES 24 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Microbat MODERN SPECIES 952 ENSMLUG00000024334 TMEM106B (ENSMLUG00000003287) THSD7A (ENSMLUG00000007494) PHF14 (ENSMLUG00000010669) NDUFA4 (ENSMLUG00000006470) NXPH1 (ENSMLUG00000003339) ICA1 (ENSMLUG00000016801) #8 GLCCI1 (ENSMLUG00000016797) #9 RPA3 (ENSMLUG00000007421) #13 MIOS (ENSMLUG00000007258) #14 COL28A1 (ENSMLUG00000030093) #16 C1GALT1 (ENSMLUG00000014789) #17 ASNS (ENSMLUG00000006832) #18 TAC1 (ENSMLUG00000002327) #19 SDHAF3 (ENSMLUG00000016914) #20 DLX5 (ENSMLUG00000028784) #22 DLX6 (ENSMLUG00000016909) #23 SEM1 (ENSMLUG00000014208) #24 SLC25A13 (ENSMLUG00000013686) #25 DYNC1I1 (ENSMLUG00000013664) #28 PDK4 (ENSMLUG00000007027) #29 ASB4 (ENSMLUG00000007018) #30 PON2 (ENSMLUG00000006998) #31 PON3 (ENSMLUG00000006984) #32 PON1 (ENSMLUG00000014176) #33 PPP1R9A (ENSMLUG00000014166) #34 SGCE (ENSMLUG00000016724) #36 CASD1 (ENSMLUG00000016713) #37 COL1A2 (ENSMLUG00000015487) ENSMLUG00000028366 ENSMLUG00000026472 Greater horseshoe bat MODERN SPECIES 12 PHF14 (ENSRFEG00010018214) ENSRFEG00010018342 NXPH1 (ENSRFEG00010018380) ICA1 (ENSRFEG00010018424) #8 GLCCI1 (ENSRFEG00010018508) #9 UMAD1 (ENSRFEG00010018549) #12 RPA3 (ENSRFEG00010018600) #13 MIOS (ENSRFEG00010018659) #14 COL28A1 (ENSRFEG00010018733) #16 C1GALT1 (ENSRFEG00010018762) #17 ENSRFEG00010018832 ASNS (ENSRFEG00010018859) #18 TAC1 (ENSRFEG00010018939) #19 ENSRFEG00010019020 SDHAF3 (ENSRFEG00010010477) #20 DLX5 (ENSRFEG00010010599) #22 DLX6 (ENSRFEG00010010699) #23 ENSRFEG00010010760 ENSRFEG00010010788 #24 ENSRFEG00010010866 SLC25A13 (ENSRFEG00010010892) #25 DYNC1I1 (ENSRFEG00010010978) #28 ENSRFEG00010011186 PDK4 (ENSRFEG00010011206) #29 ASB4 (ENSRFEG00010011309) #30 PON2 (ENSRFEG00010011413) #31 PON1 (ENSRFEG00010011514) #33 PPP1R9A (ENSRFEG00010011710) #34 PEG10 (ENSRFEG00010011916) #35 SGCE (ENSRFEG00010012077) #36 ENSRFEG00010012740 Megabat MODERN SPECIES 2664 SDHAF3 (ENSPVAG00000004474) #20 DLX5 (ENSPVAG00000004470) #22 DLX6 (ENSPVAG00000004462) #23 Equus ANCESTRAL SPECIES 13 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00910000146930 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00910000147396 ENSGT00390000004037 #37 Horse MODERN SPECIES 25 NXPH1 (ENSECAG00000037686) ICA1 (ENSECAG00000011651) #8 GLCCI1 (ENSECAG00000009379) #9 ENSECAG00000052905 ENSECAG00000056496 UMAD1 (ENSECAG00000040063) #12 RPA3 (ENSECAG00000054203) #13 ENSECAG00000046902 MIOS (ENSECAG00000021834) #14 COL28A1 (ENSECAG00000013598) #16 C1GALT1 (ENSECAG00000013002) #17 ENSECAG00000029294 ASNS (ENSECAG00000012134) #18 TAC1 (ENSECAG00000002538) #19 SDHAF3 (ENSECAG00000000424) #20 DLX5 (ENSECAG00000019565) #22 DLX6 (ENSECAG00000019084) #23 ENSECAG00000057784 SEM1 (ENSECAG00000043120) #24 SLC25A13 (ENSECAG00000013738) #25 DYNC1I1 (ENSECAG00000014203) #28 PDK4 (ENSECAG00000008335) #29 ASB4 (ENSECAG00000022256) #30 PON2 (ENSECAG00000010414) #31 PON3 (ENSECAG00000009974) #32 PON1 (ENSECAG00000000344) #33 PPP1R9A (ENSECAG00000015961) #34 PEG10 (ENSECAG00000001603) #35 SGCE (ENSECAG00000020155) #36 ENSECAG00000050540 CASD1 (ENSECAG00000011527) #37 Donkey MODERN SPECIES ENSEASG00005031867 NXPH1 (ENSEASG00005027831) ICA1 (ENSEASG00005021047) #8 GLCCI1 (ENSEASG00005021039) #9 UMAD1 (ENSEASG00005032980) #12 RPA3 (ENSEASG00005030958) #13 MIOS (ENSEASG00005021021) #14 COL28A1 (ENSEASG00005021002) #16 ENSEASG00005027814 #17 ENSEASG00005020977 ENSEASG00005020972 #18 ENSEASG00005032200 #19 ENSEASG00005020961 ENSEASG00005024327 ENSEASG00005020955 #20 DLX5 (ENSEASG00005020950) #22 DLX6 (ENSEASG00005020943) #23 ENSEASG00005020938 SEM1 (ENSEASG00005037776) #24 SLC25A13 (ENSEASG00005020923) #25 DYNC1I1 (ENSEASG00005020909) #28 PDK4 (ENSEASG00005020903) #29 ASB4 (ENSEASG00005020898) #30 PON2 (ENSEASG00005020892) #31 ENSEASG00005028182 PON3 (ENSEASG00005020888) #32 PON1 (ENSEASG00005020870) #33 PPP1R9A (ENSEASG00005020843) #34 PEG10 (ENSEASG00005020829) #35 SGCE (ENSEASG00005020815) #36 CASD1 (ENSEASG00005020801) #37 Eulipotyphla ANCESTRAL SPECIES 1087 ENSGT00940000159188 #22 ENSGT00940000157683 #23 Hedgehog MODERN SPECIES 7222 DLX5 (ENSEEUG00000011053) #22 ENSEEUG00000010934 #23 Atlantogenata ANCESTRAL SPECIES 7 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 Afrotheria ANCESTRAL SPECIES 5 ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 ENSGT01100000263525.b.b.a Afrotheria_a ANCESTRAL SPECIES 5 ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000162637 ENSGT01100000263525.b.b.a Elephant MODERN SPECIES 428 ENSLAFG00000031984 ENSLAFG00000026511 ARL4A (ENSLAFG00000022094) SCIN (ENSLAFG00000014843) TMEM106B (ENSLAFG00000002348) THSD7A (ENSLAFG00000001777) PHF14 (ENSLAFG00000000589) NXPH1 (ENSLAFG00000014369) ICA1 (ENSLAFG00000005267) #8 GLCCI1 (ENSLAFG00000005261) #9 MIOS (ENSLAFG00000005091) #14 C1GALT1 (ENSLAFG00000000063) #17 ASNS (ENSLAFG00000000909) #18 TAC1 (ENSLAFG00000000907) #19 ENSLAFG00000031515 DLX5 (ENSLAFG00000022895) #22 DLX6 (ENSLAFG00000018015) #23 SEM1 (ENSLAFG00000012653) #24 SLC25A13 (ENSLAFG00000018445) #25 DYNC1I1 (ENSLAFG00000018441) #28 PDK4 (ENSLAFG00000011165) #29 ASB4 (ENSLAFG00000007164) #30 PON2 (ENSLAFG00000005043) #31 PON3 (ENSLAFG00000005041) #32 PON1 (ENSLAFG00000005035) #33 PPP1R9A (ENSLAFG00000005029) #34 SGCE (ENSLAFG00000001299) #36 CASD1 (ENSLAFG00000001296) #37 COL1A2 (ENSLAFG00000017137) BET1 (ENSLAFG00000000587) GNG11 (ENSLAFG00000018472) Hyrax MODERN SPECIES 11819 DLX5 (ENSPCAG00000007446) #22 DLX6 (ENSPCAG00000007398) #23 Tenrec MODERN SPECIES 17685 DLX5 (ENSETEG00000012905) #22 DLX6 (ENSETEG00000012907) #23 Xenarthra ANCESTRAL SPECIES 254 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 Armadillo MODERN SPECIES 2774 SDHAF3 (ENSDNOG00000034065) #20 DLX5 (ENSDNOG00000008778) #22 DLX6 (ENSDNOG00000031561) #23 SEM1 (ENSDNOG00000048095) #24 ENSDNOG00000039816 SLC25A13 (ENSDNOG00000015565) #25 ENSDNOG00000047415 #28 ENSDNOG00000033564 #28 PDK4 (ENSDNOG00000012861) #29 ASB4 (ENSDNOG00000043911) #30 PON2 (ENSDNOG00000048645) #31 PON3 (ENSDNOG00000005791) #32 PON1 (ENSDNOG00000006882) #33 PPP1R9A (ENSDNOG00000006871) #34 ENSDNOG00000036759 #35 SGCE (ENSDNOG00000002355) #36 CASD1 (ENSDNOG00000007252) #37 Sloth MODERN SPECIES 10537 DLX5 (ENSCHOG00000004334) #22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.i #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00390000016016.B Diprotodontia ANCESTRAL SPECIES 18 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.i #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00390000016016.B Diprotodontia_a ANCESTRAL SPECIES 20 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.d ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.i #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932.c.a.a #31 ENSGT00390000008932.c.b #32 ENSGT00390000008932.c.a.b #33 ENSGT00940000155538 #34 ENSGT00950000183173.P #35 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00390000016016.B Common wonbat MODERN SPECIES 436 ENSVURG00010000712 #17 ASNS (ENSVURG00010000625) #18 TAC1 (ENSVURG00010000552) #19 SDHAF3 (ENSVURG00010000537) #20 DLX5 (ENSVURG00010000514) #22 SEM1 (ENSVURG00010000463) #24 SLC25A13 (ENSVURG00010000424) #25 DYNC1I1 (ENSVURG00010000355) #28 PDK4 (ENSVURG00010000317) #29 ASB4 (ENSVURG00010000290) #30 PON2 (ENSVURG00010000281) #31 PON3 (ENSVURG00010024804) #32 PON1 (ENSVURG00010024803) #33 PPP1R9A (ENSVURG00010024802) #34 ENSVURG00010024800 #35 SGCE (ENSVURG00010024788) #36 CASD1 (ENSVURG00010024768) #37 COL1A2 (ENSVURG00010024752) ENSVURG00010024746 ENSVURG00010024742 koala MODERN SPECIES 80 TMEM106B (ENSPCIG00000011692) THSD7A (ENSPCIG00000025228) PHF14 (ENSPCIG00000025221) ENSPCIG00000037019 NXPH1 (ENSPCIG00000010638) ICA1 (ENSPCIG00000020818) #8 GLCCI1 (ENSPCIG00000020819) #9 UMAD1 (ENSPCIG00000020820) #12 RPA3 (ENSPCIG00000020822) #13 MIOS (ENSPCIG00000020823) #14 COL28A1 (ENSPCIG00000032724) #16 C1GALT1 (ENSPCIG00000020829) #17 ASNS (ENSPCIG00000020832) #18 TAC1 (ENSPCIG00000020833) #19 SDHAF3 (ENSPCIG00000002889) #20 DLX5 (ENSPCIG00000002894) #22 DLX6 (ENSPCIG00000037141) #23 SEM1 (ENSPCIG00000028955) #24 SLC25A13 (ENSPCIG00000028956) #25 DYNC1I1 (ENSPCIG00000028957) #28 PDK4 (ENSPCIG00000037009) #29 ASB4 (ENSPCIG00000028960) #30 PON2 (ENSPCIG00000028961) #31 PON3 (ENSPCIG00000028963) #32 PON1 (ENSPCIG00000028964) #33 PPP1R9A (ENSPCIG00000028965) #34 ENSPCIG00000028966 #35 SGCE (ENSPCIG00000028967) #36 CASD1 (ENSPCIG00000028968) #37 COL1A2 (ENSPCIG00000028970) ENSPCIG00000028971 Wallaby MODERN SPECIES 1521 DLX5 (ENSMEUG00000012817) #22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000014230 TMEM106B (ENSSHAG00000014059) THSD7A (ENSSHAG00000011210) PHF14 (ENSSHAG00000009940) NXPH1 (ENSSHAG00000026050) ENSSHAG00000025497 #8 ENSSHAG00000021268 #9 ENSSHAG00000024581 #14 ENSSHAG00000005342 #12 RPA3 (ENSSHAG00000031612) #13 ENSSHAG00000028708 ENSSHAG00000006557 #17 ENSSHAG00000023951 #18 ENSSHAG00000007629 #19 SDHAF3 (ENSSHAG00000023133) #20 DLX5 (ENSSHAG00000005736) #22 DLX6 (ENSSHAG00000022084) #23 ENSSHAG00000022755 SLC25A13 (ENSSHAG00000007428) #25 ENSSHAG00000021760 #28 ENSSHAG00000021828 #28 PDK4 (ENSSHAG00000028765) #29 ASB4 (ENSSHAG00000000823) #30 PON2 (ENSSHAG00000031204) #31 PON3 (ENSSHAG00000005610) #32 PON1 (ENSSHAG00000026197) #33 PPP1R9A (ENSSHAG00000003936) #34 ENSSHAG00000023764 ##35 SGCE (ENSSHAG00000006331) #36 CASD1 (ENSSHAG00000005982) #37 ENSSHAG00000005410 Opossum MODERN SPECIES 359 ENSMODG00000044957 #18 TAC1 (ENSMODG00000016459) #19 SDHAF3 (ENSMODG00000016467) #20 DLX5 (ENSMODG00000016468) #22 DLX6 (ENSMODG00000043322) #23 Platypus MODERN SPECIES 19 TMEM106B (ENSOANG00000010645) THSD7A (ENSOANG00000006331) ENSOANG00000048822 ENSOANG00000037100 ICA1 (ENSOANG00000005251) #8 ENSOANG00000046547 #9 UMAD1 (ENSOANG00000038240) #12 RPA3 (ENSOANG00000041840) #13 MIOS (ENSOANG00000050544) #14 C1GALT1 (ENSOANG00000037417) #17 ENSOANG00000030126 ENSOANG00000042416 #18 ENSOANG00000039867 ENSOANG00000047770 #18 TAC1 (ENSOANG00000042300) #19 DLX5 (ENSOANG00000039263) #22 ENSOANG00000045107 #23 ENSOANG00000012499 SLC25A13 (ENSOANG00000048992) #25 DYNC1I1 (ENSOANG00000041794) #28 PDK4 (ENSOANG00000014566) #29 ASB4 (ENSOANG00000048426) #30 PON3 (ENSOANG00000048302) #32 ENSOANG00000022299 #34 SGCE (ENSOANG00000004259) #36 CASD1 (ENSOANG00000004261) #37 COL1A2 (ENSOANG00000002525) ENSOANG00000039305 GNG11 (ENSOANG00000051316) GNGT1 (ENSOANG00000051164) ENSOANG00000046025 Sauria ANCESTRAL SPECIES 15 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000163195.A ENSGT00940000161647 #16 ENSGT01090000260278 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000163195.A ENSGT00940000161647 #16 ENSGT01090000260278 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b.a #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Emydidae ANCESTRAL SPECIES 34 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b.a #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Three-toed box turtle MODERN SPECIES 30 TMEM106B (ENSTMTG00000005490) THSD7A (ENSTMTG00000005525) PHF14 (ENSTMTG00000005623) NDUFA4 (ENSTMTG00000005699) NXPH1 (ENSTMTG00000005721) ICA1 (ENSTMTG00000005727) #8 GLCCI1 (ENSTMTG00000005752) #9 UMAD1 (ENSTMTG00000005771) #12 RPA3 (ENSTMTG00000005792) #13 MIOS (ENSTMTG00000005807) #14 ENSTMTG00000005840 #16 C1GALT1 (ENSTMTG00000005848) #17 ASNS (ENSTMTG00000005883) #18 TAC1 (ENSTMTG00000005910) #19 SDHAF3 (ENSTMTG00000005925) #20 DLX5 (ENSTMTG00000005931) #22 DLX6 (ENSTMTG00000005944) #23 SEM1 (ENSTMTG00000005962) #24 SLC25A13 (ENSTMTG00000005981) #25 DYNC1I1 (ENSTMTG00000006042) #28 PDK4 (ENSTMTG00000006214) #29 ASB4 (ENSTMTG00000006250) #30 ENSTMTG00000006278 #31 PPP1R9A (ENSTMTG00000006314) #34 SGCE (ENSTMTG00000006348) #36 CASD1 (ENSTMTG00000006388) #37 COL1A2 (ENSTMTG00000006595) ENSTMTG00000009167 ENSTMTG00000009185 GNG11 (ENSTMTG00000009201) TFPI2 (ENSTMTG00000009209) painted turtle MODERN SPECIES 2405 PHF14 (ENSCPBG00000024347) ENSCPBG00000024353 NDUFA4 (ENSCPBG00000024355) ENSCPBG00000024357 NXPH1 (ENSCPBG00000024366) ICA1 (ENSCPBG00000024369) #8 GLCCI1 (ENSCPBG00000024373) #9 UMAD1 (ENSCPBG00000024376) #12 RPA3 (ENSCPBG00000024377) #13 MIOS (ENSCPBG00000024381) #14 COL28A1 (ENSCPBG00000024395) #16 C1GALT1 (ENSCPBG00000024397) #17 ASNS (ENSCPBG00000024398) #18 TAC1 (ENSCPBG00000024399) #19 SDHAF3 (ENSCPBG00000024400) #20 DLX5 (ENSCPBG00000024401) #22 DLX6 (ENSCPBG00000024402) #23 ENSCPBG00000024403 SLC25A13 (ENSCPBG00000024406) #25 DYNC1I1 (ENSCPBG00000024407) #28 ENSCPBG00000024409 PDK4 (ENSCPBG00000024410) #29 ASB4 (ENSCPBG00000024411) #30 ENSCPBG00000024412 #31 PPP1R9A (ENSCPBG00000024414) #34 SGCE (ENSCPBG00000024415) #36 ENSCPBG00000024417 CASD1 (ENSCPBG00000024418) #37 COL1A2 (ENSCPBG00000024431) ENSCPBG00000024540 ENSCPBG00000024541 Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b.b #29 ENSGT01030000234646.B.a.a.a.b.a #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT01100000263525.b.b.a ENSGT00940000159917 Goode s thornscrub tortoise MODERN SPECIES 11 NDUFA4 (ENSGEVG00005009177) ENSGEVG00005009145 NXPH1 (ENSGEVG00005009132) ICA1 (ENSGEVG00005009067) #8 ENSGEVG00005009040 #9 ENSGEVG00005009017 #9 UMAD1 (ENSGEVG00005008972) #12 ENSGEVG00005008918 RPA3 (ENSGEVG00005008892) #13 MIOS (ENSGEVG00005008836) #14 ENSGEVG00005008812 #16 C1GALT1 (ENSGEVG00005008793) #17 ASNS (ENSGEVG00005018836) #18 TAC1 (ENSGEVG00005018815) #19 SDHAF3 (ENSGEVG00005018801) #20 DLX5 (ENSGEVG00005018783) #22 DLX6 (ENSGEVG00005018768) #23 SEM1 (ENSGEVG00005018763) #24 ENSGEVG00005018756 SLC25A13 (ENSGEVG00005018741) #25 DYNC1I1 (ENSGEVG00005018591) #28 ENSGEVG00005018552 #29 ENSGEVG00005018530 #29 ASB4 (ENSGEVG00005018500) #30 ENSGEVG00005018431 #31 PPP1R9A (ENSGEVG00005018351) #34 SGCE (ENSGEVG00005017638) #36 CASD1 (ENSGEVG00005017491) #37 COL1A2 (ENSGEVG00005017241) ENSGEVG00005017186 GNG11 (ENSGEVG00005017168) Abingdon island giant tortoise MODERN SPECIES 2555 SDHAF3 (ENSCABG00000016393) #20 DLX5 (ENSCABG00000016394) #22 DLX6 (ENSCABG00000016397) #23 SEM1 (ENSCABG00000016400) #24 SLC25A13 (ENSCABG00000016402) #25 DYNC1I1 (ENSCABG00000016403) #28 GNA12 (ENSCABG00000016404) AMZ1 (ENSCABG00000016407) BRAT1 (ENSCABG00000016408) Chinese turtle MODERN SPECIES 414 PHF14 (ENSPSIG00000005120) NDUFA4 (ENSPSIG00000005020) ENSPSIG00000004964 NXPH1 (ENSPSIG00000004912) ICA1 (ENSPSIG00000004836) #8 GLCCI1 (ENSPSIG00000004769) #9 UMAD1 (ENSPSIG00000004745) #12 RPA3 (ENSPSIG00000004581) #13 MIOS (ENSPSIG00000004559) #14 ENSPSIG00000004348 ENSPSIG00000001690 C1GALT1 (ENSPSIG00000004260) #17 ASNS (ENSPSIG00000004206) #18 TAC1 (ENSPSIG00000004143) #19 SDHAF3 (ENSPSIG00000004136) #20 DLX5 (ENSPSIG00000004086) #22 DLX6 (ENSPSIG00000018257) #23 SLC25A13 (ENSPSIG00000018233) #25 DYNC1I1 (ENSPSIG00000018144) #28 PDK4 (ENSPSIG00000017954) #29 ASB4 (ENSPSIG00000017877) #30 ENSPSIG00000017556 #31 PPP1R9A (ENSPSIG00000017277) #34 SGCE (ENSPSIG00000017123) #36 CASD1 (ENSPSIG00000016515) #37 COL1A2 (ENSPSIG00000014526) ENSPSIG00000001686 ENSPSIG00000014505 ENSPSIG00000014499 GNG11 (ENSPSIG00000014234) TFPI2 (ENSPSIG00000014164) Archosauria ANCESTRAL SPECIES ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT01090000260278 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Australian saltwater crocodile MODERN SPECIES ENSCPRG00005014652 THSD7A (ENSCPRG00005014643) PHF14 (ENSCPRG00005014612) ENSCPRG00005014591 NDUFA4 (ENSCPRG00005014588) NXPH1 (ENSCPRG00005014567) ICA1 (ENSCPRG00005014542) #8 GLCCI1 (ENSCPRG00005014511) #9 UMAD1 (ENSCPRG00005014510) #12 RPA3 (ENSCPRG00005014491) #13 MIOS (ENSCPRG00005014456) #14 C1GALT1 (ENSCPRG00005014427) #17 ASNS (ENSCPRG00005014419) #18 TAC1 (ENSCPRG00005014416) #19 ENSCPRG00005014395 DLX5 (ENSCPRG00005014391) #22 ENSCPRG00005014382 DLX6 (ENSCPRG00005014378) #23 SEM1 (ENSCPRG00005014353) #24 SLC25A13 (ENSCPRG00005014321) #25 DYNC1I1 (ENSCPRG00005014300) #28 PDK4 (ENSCPRG00005014274) #29 ASB4 (ENSCPRG00005014271) #30 ENSCPRG00005014261 #31 PPP1R9A (ENSCPRG00005014256) #34 SGCE (ENSCPRG00005014246) #36 CASD1 (ENSCPRG00005014236) #37 COL1A2 (ENSCPRG00005014088) ENSCPRG00005014058 GNG11 (ENSCPRG00005014055) TFPI2 (ENSCPRG00005014053) Aves ANCESTRAL SPECIES 5 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT01090000260278 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 African ostrich MODERN SPECIES 583 NXPH1 (ENSSCUG00000012915) ICA1 (ENSSCUG00000012910) #8 ENSSCUG00000012908 #9 ENSSCUG00000012906 #9 UMAD1 (ENSSCUG00000012903) #12 ENSSCUG00000012901 MIOS (ENSSCUG00000012900) #14 ENSSCUG00000012896 #16 ENSSCUG00000012895 C1GALT1 (ENSSCUG00000012894) #17 ASNS (ENSSCUG00000012893) #18 TAC1 (ENSSCUG00000012892) #19 ENSSCUG00000012891 ENSSCUG00000012889 DLX5 (ENSSCUG00000012888) #22 DLX6 (ENSSCUG00000012887) #23 SLC25A13 (ENSSCUG00000012884) #25 DYNC1I1 (ENSSCUG00000012875) #28 PDK4 (ENSSCUG00000012865) #29 ASB4 (ENSSCUG00000012862) #30 ENSSCUG00000012859 #31 PPP1R9A (ENSSCUG00000012845) #34 SGCE (ENSSCUG00000012834) #36 CASD1 (ENSSCUG00000012828) #37 COL1A2 (ENSSCUG00000012794) ENSSCUG00000012760 ENSSCUG00000012757 ENSSCUG00000012754 ENSSCUG00000012752 ENSSCUG00000012751 Neognathae ANCESTRAL SPECIES ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Galloanserae ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538.bb #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Anatidae ANCESTRAL SPECIES 1 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000163195.A ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538.bb #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Pink-footed goose MODERN SPECIES PHF14 (ENSABRG00000002155) NDUFA4 (ENSABRG00000002660) ENSABRG00000002814 NXPH1 (ENSABRG00000002853) ENSABRG00000002883 ICA1 (ENSABRG00000002965) #8 GLCCI1 (ENSABRG00000003079) #9 UMAD1 (ENSABRG00000003104) #12 RPA3 (ENSABRG00000003123) #13 MIOS (ENSABRG00000003185) #14 C1GALT1 (ENSABRG00000003357) #17 ASNS (ENSABRG00000003387) #18 TAC1 (ENSABRG00000003448) #19 ENSABRG00000003501 ENSABRG00000003628 DLX5 (ENSABRG00000003682) #22 DLX6 (ENSABRG00000003722) #23 SEM1 (ENSABRG00000003776) #24 SLC25A13 (ENSABRG00000003825) #25 DYNC1I1 (ENSABRG00000003856) #28 PDK4 (ENSABRG00000003915) #29 ASB4 (ENSABRG00000003971) #30 ENSABRG00000004054 #31 PPP1R9A (ENSABRG00000004918) #34 SGCE (ENSABRG00000006848) #36 CASD1 (ENSABRG00000007011) #37 COL1A2 (ENSABRG00000007323) ENSABRG00000008162 ENSABRG00000008175 GNG11 (ENSABRG00000008206) TFPI2 (ENSABRG00000008255) Duck MODERN SPECIES 10 PHF14 (ENSAPLG00000016105) NDUFA4 (ENSAPLG00000016250) NXPH1 (ENSAPLG00000024881) ICA1 (ENSAPLG00000003010) #8 GLCCI1 (ENSAPLG00000002840) #9 UMAD1 (ENSAPLG00000002260) #12 RPA3 (ENSAPLG00000027160) #13 MIOS (ENSAPLG00000002570) #14 ENSAPLG00000030634 ENSAPLG00000001777 ENSAPLG00000031039 #16 C1GALT1 (ENSAPLG00000029207) #17 ASNS (ENSAPLG00000016311) #18 ENSAPLG00000016294 #19 ENSAPLG00000002256 DLX5 (ENSAPLG00000024281) #22 DLX6 (ENSAPLG00000016266) #23 SEM1 (ENSAPLG00000019053) #24 SLC25A13 (ENSAPLG00000015909) #25 ENSAPLG00000029549 DYNC1I1 (ENSAPLG00000015780) #28 ENSAPLG00000031095 PDK4 (ENSAPLG00000015678) #29 ASB4 (ENSAPLG00000015492) #30 ENSAPLG00000014945 #31 ENSAPLG00000017093 #34 ENSAPLG00000014577 #34 SGCE (ENSAPLG00000014328) #36 ENSAPLG00000030575 CASD1 (ENSAPLG00000014013) #37 COL1A2 (ENSAPLG00000011169) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538.bb #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037.g #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Japanese quail MODERN SPECIES 11 THSD7A (ENSCJPG00005011603) PHF14 (ENSCJPG00005011597) NDUFA4 (ENSCJPG00005011574) ENSCJPG00005011556 NXPH1 (ENSCJPG00005011550) ICA1 (ENSCJPG00005011548) #8 GLCCI1 (ENSCJPG00005011533) #9 UMAD1 (ENSCJPG00005011535) #12 RPA3 (ENSCJPG00005011530) #13 MIOS (ENSCJPG00005011529) #14 COL28A1 (ENSCJPG00005011528) #16 C1GALT1 (ENSCJPG00005011527) #17 ASNS (ENSCJPG00005011523) #18 TAC1 (ENSCJPG00005011522) #19 ENSCJPG00005011519 DLX5 (ENSCJPG00005011516) #22 DLX6 (ENSCJPG00005011514) #23 ENSCJPG00005011510 SLC25A13 (ENSCJPG00005011503) #25 DYNC1I1 (ENSCJPG00005011488) #28 PDK4 (ENSCJPG00005011473) #29 ASB4 (ENSCJPG00005011472) #30 ENSCJPG00005011468 #31 PPP1R9A (ENSCJPG00005011457) #34 SGCE (ENSCJPG00005011442) #36 CASD1 (ENSCJPG00005011435) #37 COL1A2 (ENSCJPG00005009957) ENSCJPG00005009910 ENSCJPG00005009909 ENSCJPG00005009906 GNG11 (ENSCJPG00005009908) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00940000165163 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000175476 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538.bb #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037.g #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Chicken MODERN SPECIES 11 TMEM106B (ENSGALG00010002922) THSD7A (ENSGALG00010003895) PHF14 (ENSGALG00010003851) NDUFA4 (ENSGALG00010002752) NXPH1 (ENSGALG00010002824) ICA1 (ENSGALG00010003990) #8 GLCCI1 (ENSGALG00010003982) #9 UMAD1 (ENSGALG00010003962) #12 RPA3 (ENSGALG00010003923) MIOS (ENSGALG00010003915) #14 COL28A1 (ENSGALG00010003903) #16 C1GALT1 (ENSGALG00010003406) #17 ASNS (ENSGALG00010003382) #18 TAC1 (ENSGALG00010003334) #19 ENSGALG00010002838 DLX5 (ENSGALG00010002959) #22 DLX6 (ENSGALG00010002948) #23 ENSGALG00010002944 SHFM1 (ENSGALG00010002817) #24 SLC25A13 (ENSGALG00010003666) #25 DYNC1I1 (ENSGALG00010003506) #28 PDK4 (ENSGALG00010002741) #29 ASB4 (ENSGALG00010002928) #30 PON1 (ENSGALG00010002904) #31 PPP1R9A (ENSGALG00010002868) #34 SGCE (ENSGALG00010003489) #36 CASD1 (ENSGALG00010003366) #37 COL1A2 (ENSGALG00010003307) BET1 (ENSGALG00010003184) ENSGALG00010003152 GNG11 (ENSGALG00010003107) Turkey DUPLICATION Turkey MODERN SPECIES 26 ENSMGAG00000008936 ENSMGAG00000008945 #37 ENSMGAG00000019071 #37 ENSMGAG00000008964 #36 ENSMGAG00000021087 ENSMGAG00000009555 #34 ENSMGAG00000017973 #34 ENSMGAG00000009564 #31 ENSMGAG00000009610 #29 ENSMGAG00000009599 #30 ENSMGAG00000018605 #28 ENSMGAG00000009657 #28 ENSMGAG00000009695 #25 ENSMGAG00000016039 #23 ENSMGAG00000021462 #22 ENSMGAG00000009738 #22 ENSMGAG00000019622 ENSMGAG00000009740 #19 ENSMGAG00000009747 #18 ENSMGAG00000009768 #16 ENSMGAG00000009765 #17 MIOS (ENSMGAG00000009808) #14 ENSMGAG00000022836 ENSMGAG00000009821 #9 ENSMGAG00000020961 #8 ENSMGAG00000009840 ENSMGAG00000009843 ENSMGAG00000009846 ENSMGAG00000009862 ENSMGAG00000009883 ENSMGAG00000010005 Turkey MODERN SPECIES 26 ENSMGAG00000008749 ENSMGAG00000008936 ENSMGAG00000008945 #37 ENSMGAG00000019071 #37 ENSMGAG00000008964 #36 ENSMGAG00000021087 ENSMGAG00000009555 #34 ENSMGAG00000017973 #34 ENSMGAG00000009564 #31 ENSMGAG00000009610 #29 ENSMGAG00000009599 #30 ENSMGAG00000018605 #28 ENSMGAG00000009657 #28 ENSMGAG00000009695 #25 ENSMGAG00000016039 #23 ENSMGAG00000021462 #22 ENSMGAG00000009738 #22 ENSMGAG00000019622 ENSMGAG00000009740 #19 ENSMGAG00000009747 #18 ENSMGAG00000009768 #16 ENSMGAG00000009765 #17 MIOS (ENSMGAG00000009808) #14 ENSMGAG00000022836 ENSMGAG00000009821 #9 ENSMGAG00000020961 #8 ENSMGAG00000009840 ENSMGAG00000009843 ENSMGAG00000009846 ENSMGAG00000009862 ENSMGAG00000009883 Neognathae_b ANCESTRAL SPECIES 9 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000165119 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Golden eagle MODERN SPECIES 19 TMEM106B (ENSACCG00020010387) THSD7A (ENSACCG00020010523) PHF14 (ENSACCG00020010677) NDUFA4 (ENSACCG00020010730) NXPH1 (ENSACCG00020010742) ICA1 (ENSACCG00020010768) #8 GLCCI1 (ENSACCG00020010798) #9 UMAD1 (ENSACCG00020010808) #12 RPA3 (ENSACCG00020010817) #13 MIOS (ENSACCG00020010836) #14 C1GALT1 (ENSACCG00020010856) #17 ASNS (ENSACCG00020010865) #18 TAC1 (ENSACCG00020010882) #19 ENSACCG00020010893 ENSACCG00020010901 DLX5 (ENSACCG00020010911) #22 DLX6 (ENSACCG00020010921) #23 SEM1 (ENSACCG00020010928) #24 SLC25A13 (ENSACCG00020010955) #25 DYNC1I1 (ENSACCG00020010997) #28 PDK4 (ENSACCG00020000315) #29 ASB4 (ENSACCG00020000336) #30 ENSACCG00020000364 #31 PPP1R9A (ENSACCG00020000421) #34 SGCE (ENSACCG00020000514) #36 CASD1 (ENSACCG00020000568) #37 COL1A2 (ENSACCG00020001204) ENSACCG00020001792 ENSACCG00020001809 TFPI2 (ENSACCG00020001845) CALCR (ENSACCG00020001885) Kakapo MODERN SPECIES ENSSHBG00005001778 ENSSHBG00005001720 TMEM106B (ENSSHBG00005001699) THSD7A (ENSSHBG00005001460) PHF14 (ENSSHBG00005001278) NDUFA4 (ENSSHBG00005000472) NXPH1 (ENSSHBG00005015803) ICA1 (ENSSHBG00005015798) #8 GLCCI1 (ENSSHBG00005015789) #9 UMAD1 (ENSSHBG00005015781) #12 RPA3 (ENSSHBG00005015776) #13 MIOS (ENSSHBG00005015771) #14 C1GALT1 (ENSSHBG00005015747) #17 ASNS (ENSSHBG00005015739) #18 ENSSHBG00005015729 DLX5 (ENSSHBG00005015726) #22 DLX6 (ENSSHBG00005015722) #23 SEM1 (ENSSHBG00005015718) #24 SLC25A13 (ENSSHBG00005015712) #25 DYNC1I1 (ENSSHBG00005015696) #28 PDK4 (ENSSHBG00005015690) #29 ASB4 (ENSSHBG00005015685) #30 ENSSHBG00005015683 #31 PPP1R9A (ENSSHBG00005015679) #34 SGCE (ENSSHBG00005015666) #36 CASD1 (ENSSHBG00005015652) #37 COL1A2 (ENSSHBG00005015632) ENSSHBG00005015623 GNG11 (ENSSHBG00005015615) TFPI2 (ENSSHBG00005015610) ENSSHBG00005015602 Passeriformes ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Great tit DUPLICATION Great tit MODERN SPECIES 102 ENSPMJG00000002007 #22 Great tit MODERN SPECIES 11 TMEM106B (ENSPMJG00000010740) THSD7A (ENSPMJG00000010379) PHF14 (ENSPMJG00000010302) NDUFA4 (ENSPMJG00000010215) NXPH1 (ENSPMJG00000010172) ICA1 (ENSPMJG00000010171) #8 GLCCI1 (ENSPMJG00000010126) #9 UMAD1 (ENSPMJG00000010125) #12 RPA3 (ENSPMJG00000010124) #13 MIOS (ENSPMJG00000010119) #14 COL28A1 (ENSPMJG00000010080) #16 C1GALT1 (ENSPMJG00000010079) #17 ASNS (ENSPMJG00000010078) #18 TAC1 (ENSPMJG00000010075) #19 SDHAF3 (ENSPMJG00000010062) #20 DLX5 (ENSPMJG00000010058) #22 ENSPMJG00000010054 DLX6 (ENSPMJG00000010051) #23 SEM1 (ENSPMJG00000010043) #24 SLC25A13 (ENSPMJG00000010007) #25 DYNC1I1 (ENSPMJG00000010005) #28 PDK4 (ENSPMJG00000009929) #29 ASB4 (ENSPMJG00000009928) #30 ENSPMJG00000009926 #31 PPP1R9A (ENSPMJG00000009922) #34 SGCE (ENSPMJG00000009763) #36 CASD1 (ENSPMJG00000009752) #37 COL1A2 (ENSPMJG00000008138) ENSPMJG00000007972 ENSPMJG00000007971 TFPI2 (ENSPMJG00000007970) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Flycatcher MODERN SPECIES 11 TMEM106B (ENSFALG00000023181) THSD7A (ENSFALG00000010122) PHF14 (ENSFALG00000010161) NDUFA4 (ENSFALG00000010164) NXPH1 (ENSFALG00000027255) ICA1 (ENSFALG00000010171) #8 GLCCI1 (ENSFALG00000025095) #9 UMAD1 (ENSFALG00000010182) #12 RPA3 (ENSFALG00000024130) #13 MIOS (ENSFALG00000010192) #14 COL28A1 (ENSFALG00000010204) #16 C1GALT1 (ENSFALG00000026918) #17 ASNS (ENSFALG00000010229) #18 TAC1 (ENSFALG00000026276) #19 ENSFALG00000026107 DLX5 (ENSFALG00000010250) #22 DLX6 (ENSFALG00000027921) #23 ENSFALG00000010266 SLC25A13 (ENSFALG00000010269) #25 DYNC1I1 (ENSFALG00000010272) #28 PDK4 (ENSFALG00000010276) #29 ASB4 (ENSFALG00000010284) #30 ENSFALG00000025037 #31 PPP1R9A (ENSFALG00000010302) #34 SGCE (ENSFALG00000023681) #36 CASD1 (ENSFALG00000010341) #37 COL1A2 (ENSFALG00000010356) ENSFALG00000026752 ENSFALG00000014556 ENSFALG00000010379 TFPI2 (ENSFALG00000010381) Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00940000164236 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Common canary MODERN SPECIES 5 TMEM106B (ENSSCAG00000013596) THSD7A (ENSSCAG00000013439) PHF14 (ENSSCAG00000013350) NDUFA4 (ENSSCAG00000013301) NXPH1 (ENSSCAG00000013284) ICA1 (ENSSCAG00000013253) #8 GLCCI1 (ENSSCAG00000013239) #9 UMAD1 (ENSSCAG00000013229) #12 RPA3 (ENSSCAG00000013219) #13 MIOS (ENSSCAG00000013169) #14 COL28A1 (ENSSCAG00000013153) #16 C1GALT1 (ENSSCAG00000013144) #17 ASNS (ENSSCAG00000013137) #18 TAC1 (ENSSCAG00000013128) #19 ENSSCAG00000013121 DLX5 (ENSSCAG00000013115) #22 DLX6 (ENSSCAG00000013113) #23 ENSSCAG00000013109 SEM1 (ENSSCAG00000013093) #24 SLC25A13 (ENSSCAG00000013088) #25 DYNC1I1 (ENSSCAG00000013082) #28 ENSSCAG00000013068 PDK4 (ENSSCAG00000013066) #29 ASB4 (ENSSCAG00000013057) #30 ENSSCAG00000013053 #31 PPP1R9A (ENSSCAG00000013038) #34 SGCE (ENSSCAG00000013022) #36 CASD1 (ENSSCAG00000013009) #37 COL1A2 (ENSSCAG00000012537) ENSSCAG00000012456 ENSSCAG00000012452 Zebra finch MODERN SPECIES 12 ENSTGUG00000002424 TMEM106B (ENSTGUG00000025976) THSD7A (ENSTGUG00000002402) PHF14 (ENSTGUG00000002383) NXPH1 (ENSTGUG00000001692) ICA1 (ENSTGUG00000001684) #8 GLCCI1 (ENSTGUG00000001680) #9 UMAD1 (ENSTGUG00000026086) #12 RPA3 (ENSTGUG00000024492) #13 MIOS (ENSTGUG00000001673) #14 ENSTGUG00000022931 C1GALT1 (ENSTGUG00000001666) #17 ASNS (ENSTGUG00000001657) #18 TAC1 (ENSTGUG00000001652) #19 ENSTGUG00000001650 DLX5 (ENSTGUG00000001643) #22 DLX6 (ENSTGUG00000001642) #23 SEM1 (ENSTGUG00000024983) #24 ENSTGUG00000026321 SLC25A13 (ENSTGUG00000001620) #25 PDK4 (ENSTGUG00000001585) #29 DYNC1I1 (ENSTGUG00000001589) #28 ASB4 (ENSTGUG00000001584) #30 ENSTGUG00000001577 #31 PPP1R9A (ENSTGUG00000001566) #34 SGCE (ENSTGUG00000001558) #36 CASD1 (ENSTGUG00000001556) #37 COL1A2 (ENSTGUG00000001522) BET1 (ENSTGUG00000029415) ENSTGUG00000001518 TFPI2 (ENSTGUG00000001515) Medium ground finch MODERN SPECIES 10 TMEM106B (ENSGFOG00000000739) THSD7A (ENSGFOG00000000750) PHF14 (ENSGFOG00000000775) NDUFA4 (ENSGFOG00000000823) NXPH1 (ENSGFOG00000000831) ICA1 (ENSGFOG00000000839) #8 GLCCI1 (ENSGFOG00000000857) #9 UMAD1 (ENSGFOG00000000863) #12 ENSGFOG00000000868 MIOS (ENSGFOG00000000875) #14 ENSGFOG00000000884 C1GALT1 (ENSGFOG00000000893) #17 ASNS (ENSGFOG00000000899) #18 ENSGFOG00000000913 ENSGFOG00000000918 DLX5 (ENSGFOG00000000938) #22 DLX6 (ENSGFOG00000000946) #23 ENSGFOG00000000950 ENSGFOG00000000956 SLC25A13 (ENSGFOG00000000964) #25 DYNC1I1 (ENSGFOG00000000981) #28 PDK4 (ENSGFOG00000001010) #29 ASB4 (ENSGFOG00000001056) #30 ENSGFOG00000001066 #31 PPP1R9A (ENSGFOG00000001092) #34 SGCE (ENSGFOG00000001144) #36 CASD1 (ENSGFOG00000001162) #37 COL1A2 (ENSGFOG00000001270) ENSGFOG00000002023 ENSGFOG00000002076 TFPI2 (ENSGFOG00000002106) Lepidosauria ANCESTRAL SPECIES 5 ENSGT00940000165119 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 tuatara MODERN SPECIES 32 ENSSPUG00000012516 ENSSPUG00000012422 CCDC9 (ENSSPUG00000012384) SDHAF3 (ENSSPUG00000012373) #20 DLX5 (ENSSPUG00000012360) #22 DLX6 (ENSSPUG00000012331) #23 Episquamata ANCESTRAL SPECIES 5 ENSGT00940000165119 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Laterata ANCESTRAL SPECIES 10 ENSGT00940000165119 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b.u #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.g #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Common wall lizard MODERN SPECIES 3 PHF14 (ENSPMRG00000018197) ENSPMRG00000018151 ENSPMRG00000018144 NXPH1 (ENSPMRG00000018131) ENSPMRG00000018105 #8 GLCCI1 (ENSPMRG00000018086) #9 UMAD1 (ENSPMRG00000018081) #12 RPA3 (ENSPMRG00000018073) #13 MIOS (ENSPMRG00000018062) #14 COL28A1 (ENSPMRG00000018027) #16 ENSPMRG00000018022 C1GALT1 (ENSPMRG00000018020) #17 ASNS (ENSPMRG00000018015) #18 TAC1 (ENSPMRG00000018010) #19 SDHAF3 (ENSPMRG00000018004) #20 DLX5 (ENSPMRG00000018000) #22 DLX6 (ENSPMRG00000017995) #23 ENSPMRG00000017993 ENSPMRG00000017990 SLC25A13 (ENSPMRG00000017949) #25 DYNC1I1 (ENSPMRG00000017921) #28 PDK4 (ENSPMRG00000017905) #29 ENSPMRG00000017894 #31 ENSPMRG00000017887 PPP1R9A (ENSPMRG00000017863) #34 SGCE (ENSPMRG00000017680) #36 CASD1 (ENSPMRG00000017616) #37 COL1A2 (ENSPMRG00000017574) ENSPMRG00000017564 ENSPMRG00000017548 GNG11 (ENSPMRG00000017542) Argentine black and white tegu MODERN SPECIES 5 THSD7A (ENSSMRG00000008280) PHF14 (ENSSMRG00000008287) ENSSMRG00000008300 ENSSMRG00000008303 NXPH1 (ENSSMRG00000008325) ICA1 (ENSSMRG00000008368) #8 GLCCI1 (ENSSMRG00000008411) #9 UMAD1 (ENSSMRG00000008424) #12 RPA3 (ENSSMRG00000008429) #13 MIOS (ENSSMRG00000008433) #14 COL28A1 (ENSSMRG00000008525) #16 C1GALT1 (ENSSMRG00000008532) #17 ASNS (ENSSMRG00000008534) #18 TAC1 (ENSSMRG00000008547) #19 SDHAF3 (ENSSMRG00000008552) #20 DLX5 (ENSSMRG00000008554) #22 DLX6 (ENSSMRG00000008556) #23 SEM1 (ENSSMRG00000008574) #24 SLC25A13 (ENSSMRG00000008612) #25 ENSSMRG00000008613 #28 ENSSMRG00000008629 #28 PDK4 (ENSSMRG00000008630) #29 ASB4 (ENSSMRG00000008633) #30 ENSSMRG00000008634 #31 ENSSMRG00000008637 #31 PPP1R9A (ENSSMRG00000008639) #34 SGCE (ENSSMRG00000009487) #36 CASD1 (ENSSMRG00000009493) #37 COL1A2 (ENSSMRG00000009497) ENSSMRG00000011091 ENSSMRG00000011092 Toxicofera ANCESTRAL SPECIES 4 ENSGT00940000165119 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000159917 Lizard MODERN SPECIES 5 NXPH1 (ENSACAG00000013252) ENSACAG00000042565 ICA1 (ENSACAG00000013214) #8 ENSACAG00000013179 #9 ENSACAG00000037644 ENSACAG00000039302 #9 UMAD1 (ENSACAG00000013178) #12 MIOS (ENSACAG00000013133) #14 COL28A1 (ENSACAG00000013078) #16 RPA3 (ENSACAG00000013055) #13 C1GALT1 (ENSACAG00000013040) #17 ASNS (ENSACAG00000012961) #18 ENSACAG00000041082 TAC1 (ENSACAG00000042882) #19 SDHAF3 (ENSACAG00000044650) #20 DLX5 (ENSACAG00000014717) #22 DLX6 (ENSACAG00000014705) #23 ENSACAG00000014686 SLC25A13 (ENSACAG00000014580) #25 DYNC1I1 (ENSACAG00000014180) #28 PDK4 (ENSACAG00000014020) #29 ASB4 (ENSACAG00000013993) #30 ENSACAG00000013907 #31 PPP1R9A (ENSACAG00000027389) #34 SGCE (ENSACAG00000013695) #36 CASD1 (ENSACAG00000013610) #37 COL1A2 (ENSACAG00000013301) ENSACAG00000013288 ENSACAG00000028975 GNG11 (ENSACAG00000039873) TFPI2 (ENSACAG00000013275) Elapidae ANCESTRAL SPECIES 5 ENSGT00940000159083 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b.a ENSGT00940000155380 Elapidae_a ANCESTRAL SPECIES 19 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923.b ENSGT00940000156923.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000157744.i ENSGT00950000183046.a.b ##9 ENSGT00940000157900 ENSGT00940000154376.b ENSGT00950000182883.a.a ENSGT00730000110974 ENSGT00950000183070.a.b.eb ENSGT00940000157416.q ENSGT00390000007741.a ENSGT00940000161380.c ENSGT00940000161380.d.b ENSGT01100000263525.b.a ENSGT00940000160427 Acanthophiinae ANCESTRAL SPECIES 19 ENSGT00940000159083 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000157744.i ENSGT00950000183046.a.b ##9 ENSGT00940000157900 ENSGT00940000154376.b ENSGT00950000182883.a.a ENSGT00730000110974 ENSGT00950000183070.a.b.eb ENSGT00940000157416.q ENSGT00390000007741.a ENSGT00940000161380.c ENSGT01100000263525.b.a ENSGT00940000160427 ENSGT00390000005121 ENSGT00390000007843.cb Mainland tiger snake MODERN SPECIES 76 C1GALT1 (ENSNSUG00000006525) #17 ASNS (ENSNSUG00000006526) #18 TAC1 (ENSNSUG00000006529) #19 ENSNSUG00000006532 SDHAF3 (ENSNSUG00000006533) #20 DLX5 (ENSNSUG00000006534) #22 DLX6 (ENSNSUG00000006536) #23 SEM1 (ENSNSUG00000006537) #24 SLC25A13 (ENSNSUG00000006540) #25 ENSNSUG00000008621 #28 ENSNSUG00000008625 #28 PDK4 (ENSNSUG00000008628) #29 ASB4 (ENSNSUG00000008629) #30 ENSNSUG00000008630 #31 PPP1R9A (ENSNSUG00000008631) #34 SGCE (ENSNSUG00000008644) #36 CASD1 (ENSNSUG00000008858) #37 COL1A2 (ENSNSUG00000008859) ENSNSUG00000009198 ENSNSUG00000009199 GNG11 (ENSNSUG00000009200) Eastern brown snake MODERN SPECIES 31 SCIN (ENSPTXG00000013690) TMEM106B (ENSPTXG00000013688) THSD7A (ENSPTXG00000013681) PHF14 (ENSPTXG00000013670) NXPH1 (ENSPTXG00000013666) ICA1 (ENSPTXG00000013661) #8 GLCCI1 (ENSPTXG00000013657) #9 UMAD1 (ENSPTXG00000013654) #12 RPA3 (ENSPTXG00000013652) #13 MIOS (ENSPTXG00000013649) #14 ENSPTXG00000013646 #16 C1GALT1 (ENSPTXG00000013643) #17 ASNS (ENSPTXG00000013639) #18 TAC1 (ENSPTXG00000013634) #19 SDHAF3 (ENSPTXG00000013630) #20 DLX5 (ENSPTXG00000013626) #22 DLX6 (ENSPTXG00000013622) #23 ENSPTXG00000013619 SEM1 (ENSPTXG00000013617) #24 SLC25A13 (ENSPTXG00000013613) #25 DYNC1I1 (ENSPTXG00000013603) #28 PDK4 (ENSPTXG00000013594) #29 ASB4 (ENSPTXG00000013589) #30 ENSPTXG00000013587 ENSPTXG00000013557 #31 PPP1R9A (ENSPTXG00000005898) #34 SGCE (ENSPTXG00000005081) #36 CASD1 (ENSPTXG00000005080) #37 COL1A2 (ENSPTXG00000005079) ENSPTXG00000005078 ENSPTXG00000005077 Blue-lipped sea krait MODERN SPECIES 5905 DLX5 (ENSLLTG00000007193) #22 DLX6 (ENSLLTG00000007239) #23 Indian cobra MODERN SPECIES 337 ARL4A (ENSNNAG00000017228) SCIN (ENSNNAG00000016731) TMEM106B (ENSNNAG00000016682) THSD7A (ENSNNAG00000016564) PHF14 (ENSNNAG00000016495) NXPH1 (ENSNNAG00000016483) ICA1 (ENSNNAG00000016469) #8 GLCCI1 (ENSNNAG00000016456) #9 UMAD1 (ENSNNAG00000016445) #12 RPA3 (ENSNNAG00000016439) #13 MIOS (ENSNNAG00000016426) #14 C1GALT1 (ENSNNAG00000016419) #17 ASNS (ENSNNAG00000016411) #18 TAC1 (ENSNNAG00000016404) #19 SDHAF3 (ENSNNAG00000016403) #20 DLX5 (ENSNNAG00000016396) #22 DLX6 (ENSNNAG00000016387) #23 SEM1 (ENSNNAG00000016383) #24 SLC25A13 (ENSNNAG00000016372) #25 ENSNNAG00000016365 DYNC1I1 (ENSNNAG00000016316) #28 PDK4 (ENSNNAG00000016287) #29 ASB4 (ENSNNAG00000016270) #30 ENSNNAG00000016258 #31 ENSNNAG00000016247 #34 SGCE (ENSNNAG00000015989) #36 CASD1 (ENSNNAG00000015965) #37 COL1A2 (ENSNNAG00000013513) ENSNNAG00000013332 GNG11 (ENSNNAG00000013324) ENSNNAG00000013296 Anura ANCESTRAL SPECIES 12 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT01010000229212 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000157744 ENSGT00940000157900 ENSGT00940000154376.b ENSGT00950000182883.a.a ENSGT00730000110974 ENSGT00950000183070.a.b ENSGT00940000157416 ENSGT00390000007741.a ENSGT01100000263525.b.a ENSGT00390000006679.b Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000011664 ENSLLEG00000011316 #8 GLCCI1 (ENSLLEG00000011221) #9 UMAD1 (ENSLLEG00000011192) #12 RPA3 (ENSLLEG00000011130) #13 MIOS (ENSLLEG00000011024) #14 ENSLLEG00000011000 C1GALT1 (ENSLLEG00000010980) #17 ENSLLEG00000010962 ENSLLEG00000010872 #18 ENSLLEG00000010717 #18 TAC1 (ENSLLEG00000010439) #19 ENSLLEG00000010374 SDHAF3 (ENSLLEG00000010343) #20 ENSLLEG00000010290 DLX5 (ENSLLEG00000010237) #22 DLX6 (ENSLLEG00000010160) #23 ENSLLEG00000010132 SEM1 (ENSLLEG00000010098) #24 ENSLLEG00000010076 SLC25A13 (ENSLLEG00000009711) #25 ENSLLEG00000009658 DYNC1I1 (ENSLLEG00000008461) #28 PDK4 (ENSLLEG00000008002) #29 ENSLLEG00000007972 #30 ENSLLEG00000007660 #31 ENSLLEG00000007584 PPP1R9A (ENSLLEG00000007469) #34 SGCE (ENSLLEG00000006774) #36 CASD1 (ENSLLEG00000006550) #37 COL1A2 (ENSLLEG00000006321) Frog MODERN SPECIES 6 thsd7a (ENSXETG00000011329) phf14 (ENSXETG00000022249) nxph1 (ENSXETG00000039626) ENSXETG00000042354 ica1 (ENSXETG00000007286) #8 glcci1 (ENSXETG00000007289) #9 umad1 (ENSXETG00000039061) #12 rpa3 (ENSXETG00000007291) #13 mios (ENSXETG00000007293) #14 col28a1 (ENSXETG00000048036) #16 c1galt1 (ENSXETG00000007295) #17 asns (ENSXETG00000025707) #18 tac1 (ENSXETG00000025709) #19 ENSXETG00000042536 sdhaf3 (ENSXETG00000035097) #20 dlx5 (ENSXETG00000016572) #22 dlx6 (ENSXETG00000016573) #23 sem1 (ENSXETG00000016575) #24 slc25a13 (ENSXETG00000016576) #25 dync1i1 (ENSXETG00000020277) #28 ENSXETG00000039134 pdk4 (ENSXETG00000020289) #29 asb4 (ENSXETG00000020295) #30 pon2 (ENSXETG00000020299) #31 ppp1r9a (ENSXETG00000020305) #34 sgce (ENSXETG00000020306) #36 casd1 (ENSXETG00000020309) #37 col1a2 (ENSXETG00000020318) bet1 (ENSXETG00000044866) mgc147631 (ENSXETG00000013902) gngt1 (ENSXETG00000013901) Coelacanth MODERN SPECIES 3168 DLX5 (ENSLACG00000001740) #22 DLX6 (ENSLACG00000002213) #23 Actinopterygii ANCESTRAL SPECIES 9 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000163195.A ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000001883 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Neopterygii ANCESTRAL SPECIES 7 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b #8 ENSGT00950000183046.b #9 ENSGT00390000003051 #12 ENSGT00390000008029 #13 ENSGT00390000015038 #14 ENSGT00940000161647 #16 ENSGT00940000163195.A ENSGT00940000155000 #17 ENSGT00390000001994 #18 ENSGT00390000002457 #19 ENSGT00390000001883 ENSGT00390000010029 #20 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032 #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00390000008932 #31 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Osteoglossocephalai ANCESTRAL SPECIES 88 ENSGT00940000162035 ENSGT00940000154725 ENSGT00940000157280 ENSGT00940000156079 ENSGT00940000163129 ENSGT00940000164954 ENSGT00940000162238.a.a ENSGT00940000179266 ENSGT00940000164076.a.b ENSGT00940000159308 ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00940000166127 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Clupeocephala ANCESTRAL SPECIES 40 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Otomorpha ANCESTRAL SPECIES 139 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Clupeiformes ANCESTRAL SPECIES 15 ENSGT00940000155549.a.a.b ENSGT00530000063461.A.b ENSGT00550000074698.a.b ENSGT00940000155113.a.a.b ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b ENSGT01040000240444.B.a ENSGT00940000166193 ENSGT00390000004554 ENSGT00950000183081.b.i.b ENSGT00390000014944.b ENSGT00940000154491.c.a.b ENSGT00940000160042 ENSGT00940000166127 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 12 ENSDCDG00000033064 cfap20 (ENSDCDG00000033065) dgat1a (ENSDCDG00000033086) zgc:63863 (ENSDCDG00000033334) scrt1a (ENSDCDG00000033337) ENSDCDG00000033340 ENSDCDG00000033344 chrac1 (ENSDCDG00000023780) ago2 (ENSDCDG00000023788) ENSDCDG00000023800 DYNC1I1 (ENSDCDG00000023856) #28 SLC25A13 (ENSDCDG00000028567) #25 sem1 (ENSDCDG00000029491) #24 dlx6a (ENSDCDG00000029493) #23 dlx5a (ENSDCDG00000029494) #22 dlx5a (ENSDCDG00000029495) #22 dlx6a (ENSDCDG00000029497) #23 sem1 (ENSDCDG00000029499) #24 SLC25A13 (ENSDCDG00000029510) #25 DYNC1I1 (ENSDCDG00000029921) #28 pdk4 (ENSDCDG00000030640) #29 asb4 (ENSDCDG00000031641) #30 PPP1R9A (ENSDCDG00000031664) #34 sgce (ENSDCDG00000031897) #36 casd1 (ENSDCDG00000032234) #37 col1a2 (ENSDCDG00000032255) ENSDCDG00000032562 bet1 (ENSDCDG00000032564) zgc:85777 (ENSDCDG00000032568) gngt1 (ENSDCDG00000032628) tfpi2 (ENSDCDG00000032630) Denticle herring MODERN SPECIES 12 gngt1 (ENSDCDG00000032628) zgc:85777 (ENSDCDG00000032568) bet1 (ENSDCDG00000032564) ENSDCDG00000032562 col1a2 (ENSDCDG00000032255) casd1 (ENSDCDG00000032234) #37 sgce (ENSDCDG00000031897) #36 PPP1R9A (ENSDCDG00000031664) #34 asb4 (ENSDCDG00000031641) #30 pdk4 (ENSDCDG00000030640) #29 DYNC1I1 (ENSDCDG00000029921) #28 SLC25A13 (ENSDCDG00000029510) #25 sem1 (ENSDCDG00000029499) #24 dlx6a (ENSDCDG00000029497) #23 dlx5a (ENSDCDG00000029495) #22 dlx5a (ENSDCDG00000029494) #22 dlx6a (ENSDCDG00000029493) #23 sem1 (ENSDCDG00000029491) #24 SLC25A13 (ENSDCDG00000028567) #25 DYNC1I1 (ENSDCDG00000023856) #28 ENSDCDG00000023800 ago2 (ENSDCDG00000023788) chrac1 (ENSDCDG00000023780) ENSDCDG00000033344 ENSDCDG00000033340 scrt1a (ENSDCDG00000033337) zgc:63863 (ENSDCDG00000033334) dgat1a (ENSDCDG00000033086) cfap20 (ENSDCDG00000033065) ENSDCDG00000033064 GPR20 (ENSDCDG00000033058) Atlantic herring MODERN SPECIES 10 clptm1l (ENSCHAG00000025096) rplp1 (ENSCHAG00000025085) PTK2 (ENSCHAG00000024267) DENND3 (ENSCHAG00000024175) SLC45A4 (ENSCHAG00000024097) GPR20 (ENSCHAG00000024087) ENSCHAG00000024051 cfap20 (ENSCHAG00000024045) dgat1a (ENSCHAG00000023926) zgc:63863 (ENSCHAG00000023910) scrt1a (ENSCHAG00000023906) ENSCHAG00000023899 ENSCHAG00000023887 chrac1 (ENSCHAG00000023881) ago2 (ENSCHAG00000021026) dlx5a (ENSCHAG00000020922) #22 dlx6a (ENSCHAG00000020895) #23 ENSCHAG00000020872 SLC25A13 (ENSCHAG00000020352) #25 DYNC1I1 (ENSCHAG00000015887) #28 pdk4 (ENSCHAG00000015516) #29 asb4 (ENSCHAG00000015505) #30 PPP1R9A (ENSCHAG00000014840) #34 sgce (ENSCHAG00000014405) #36 ST3GAL1 (ENSCHAG00000014073) ENSCHAG00000014046 ENSCHAG00000013952 cpsf1 (ENSCHAG00000013393) adck5 (ENSCHAG00000013359) ENSCHAG00000013351 ctdp1 (ENSCHAG00000013338) Otophysi ANCESTRAL SPECIES 108 ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Characiphysae ANCESTRAL SPECIES 10 ENSGT00390000018319.b.b ENSGT00990000204496 ENSGT00390000016136 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00940000154766.a.a ENSGT00940000160023 ENSGT00390000004097.b ENSGT01050000244841.A.a.a.b ENSGT00940000164559.A ENSGT01080000257659 ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Channel catfish MODERN SPECIES 16 ENSIPUG00000001349 znf704 (ENSIPUG00000001320) tpd52 (ENSIPUG00000001276) zbtb10 (ENSIPUG00000001257) hey1 (ENSIPUG00000001232) Stmn2 (ENSIPUG00000001197) si:dkeyp-120h9.1 (ENSIPUG00000001184) fam65b (ENSIPUG00000001130) GMNN (ENSIPUG00000001105) c24h6orf62 (ENSIPUG00000001098) Acot13 (ENSIPUG00000001081) ENSIPUG00000001075 Chrac1 (ENSIPUG00000001064) ENSIPUG00000001059 ago2 (ENSIPUG00000001018) dlx5 (ENSIPUG00000001005) #22 dlx6a (ENSIPUG00000000994) #23 ENSIPUG00000023108 ENSIPUG00000023105 dync1i1 (ENSIPUG00000023073) #28 pdk4 (ENSIPUG00000023063) #29 asb4 (ENSIPUG00000023062) #30 PPP1R9A (ENSIPUG00000023042) #34 sgce (ENSIPUG00000023027) #36 casd1 (ENSIPUG00000023006) #37 ENSIPUG00000023001 col1a2 (ENSIPUG00000022834) bet1 (ENSIPUG00000022823) zgc:85777 (ENSIPUG00000022802) gngt1 (ENSIPUG00000022794) tfpi2 (ENSIPUG00000022790) Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00390000018319.b.b ENSGT00990000204496 ENSGT00390000016136 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00940000154766.a.a ENSGT00940000160023 ENSGT00390000004097.b ENSGT01050000244841.A.a.a.b ENSGT00940000164559.A ENSGT01080000257659 ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Electric eel MODERN SPECIES 179 ENSEEEG00000022157 trioa (ENSEEEG00000022032) TINAGL1 (ENSEEEG00000022030) gatad2b (ENSEEEG00000022029) gnrhr1 (ENSEEEG00000022028) ENSEEEG00000022027 ENSEEEG00000022026 chrac1 (ENSEEEG00000022025) ago2 (ENSEEEG00000022018) dlx5a (ENSEEEG00000022016) #22 dlx6a (ENSEEEG00000022015) #23 sem1 (ENSEEEG00000022013) #24 SLC25A13 (ENSEEEG00000022012) #25 DYNC1I1 (ENSEEEG00000022001) #28 pdk4 (ENSEEEG00000021944) #29 asb4 (ENSEEEG00000021941) #30 PPP1R9A (ENSEEEG00000021807) #34 sgce (ENSEEEG00000021730) #36 casd1 (ENSEEEG00000021675) #37 col1a2 (ENSEEEG00000021238) bet1 (ENSEEEG00000021204) zgc:85777 (ENSEEEG00000021202) gngt1 (ENSEEEG00000021199) tfpi2 (ENSEEEG00000021198) ENSEEEG00000021197 Characoidei ANCESTRAL SPECIES 3 ENSGT00390000018319.b.b ENSGT00990000204496 ENSGT00390000016136 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00940000154766.a.a ENSGT00940000160023 ENSGT00390000004097.b ENSGT01050000244841.A.a.a.b ENSGT00940000164559.A ENSGT01080000257659 ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Red-bellied piranha MODERN SPECIES 1 cart4 (ENSPNAG00000028296) si:ch211-191i18.4 (ENSPNAG00000028309) jtb (ENSPNAG00000028318) KCNQ4 (ENSPNAG00000006924) nfyc (ENSPNAG00000028476) ENSPNAG00000006927 trioa (ENSPNAG00000005824) TINAGL1 (ENSPNAG00000028756) gatad2b (ENSPNAG00000028837) gnrhr1 (ENSPNAG00000004797) ENSPNAG00000005321 ENSPNAG00000028938 chrac1 (ENSPNAG00000028949) ENSPNAG00000028969 ago2 (ENSPNAG00000029030) dlx5a (ENSPNAG00000004500) #22 dlx6a (ENSPNAG00000029056) #23 ENSPNAG00000006396 SLC25A13 (ENSPNAG00000029120) #25 DYNC1I1 (ENSPNAG00000029224) #28 pdk4 (ENSPNAG00000029281) #29 asb4 (ENSPNAG00000029289) #30 PPP1R9A (ENSPNAG00000006400) #34 sgce (ENSPNAG00000005835) #36 casd1 (ENSPNAG00000029564) #37 col1a2 (ENSPNAG00000029588) bet1 (ENSPNAG00000029605) zgc:85777 (ENSPNAG00000005003) gngt1 (ENSPNAG00000006582) tfpi2 (ENSPNAG00000007767) CALCR (ENSPNAG00000000459) Mexicana tetra MODERN SPECIES 15 si:ch211-191i18.4 (ENSAMXG00000041626) jtb (ENSAMXG00000043295) KCNQ4 (ENSAMXG00000042342) nfyc (ENSAMXG00000020470) ENSAMXG00000020467 trioa (ENSAMXG00000020463) TINAGL1 (ENSAMXG00000014689) gatad2b (ENSAMXG00000014687) gnrhr1 (ENSAMXG00000014681) ENSAMXG00000014662 ENSAMXG00000014638 chrac1 (ENSAMXG00000014633) ENSAMXG00000042042 ENSAMXG00000027642 ago2 (ENSAMXG00000014587) dlx5a (ENSAMXG00000043553) #22 dlx6a (ENSAMXG00000037105) #23 sem1 (ENSAMXG00000032383) #24 SLC25A13 (ENSAMXG00000014532) #25 DYNC1I1 (ENSAMXG00000014523) #28 pdk4 (ENSAMXG00000036789) #29 asb4 (ENSAMXG00000029158) #30 PPP1R9A (ENSAMXG00000014444) #34 sgce (ENSAMXG00000014430) #36 casd1 (ENSAMXG00000014424) #37 ENSAMXG00000033282 col1a2 (ENSAMXG00000021065) bet1 (ENSAMXG00000014416) zgc:85777 (ENSAMXG00000037869) gngt1 (ENSAMXG00000014381) tfpi2 (ENSAMXG00000014363) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00390000018319.b.b ENSGT00990000204496 ENSGT00390000016136 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00940000154766.a.a ENSGT00940000170013 ENSGT00390000004097.b ENSGT01050000244841.A.a.a.b ENSGT00940000164559.A ENSGT00390000010652.A.b ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683.a #23 ENSGT00940000157683.b #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 97 ENSGT00950000182907.a.a.ic.a.c ENSGT00740000116913 ENSGT00390000018319.b.b.b ENSGT00990000204496.a ENSGT00390000016136.r ENSGT00940000159209.b ENSGT00940000155689.k ENSGT00940000170761.b ENSGT00940000154766.a.a.kb ENSGT00940000170013.a ENSGT00390000004097.b.k ENSGT01050000244841.A.a.a.b.b ENSGT00940000164559.A.e ENSGT00940000166127.b ENSGT00940000155239.c ENSGT00940000159188.g #22 ENSGT00940000157683.a #23 ENSGT00940000159344.j #25 ENSGT00940000156032.`b.b.b.c #28 ENSGT01030000234646.B.a.a.a.b.e #29 ENSGT00940000158874.c #30 ENSGT00940000155538.b #34 ENSGT00390000005672.a.b.g #36 ENSGT00390000004037.l #37 ENSGT00940000155639.w.a ENSGT00940000163414.c ENSGT00940000164410.a ENSGT00940000159917.b ENSGT00940000155380.d.b ENSGT00390000003442.a ENSGT01100000263551.b.b.b.b Goldfish MODERN SPECIES 38 anp32e (ENSCARG00000048578) si:ch211-191i18.2 (ENSCARG00000048557) cart4 (ENSCARG00000048536) si:ch211-191i18.4 (ENSCARG00000048519) jtb (ENSCARG00000048500) KCNQ4 (ENSCARG00000048479) nfyc (ENSCARG00000047708) ENSCARG00000047641 trioa (ENSCARG00000047121) tinagl1 (ENSCARG00000046880) gatad2b (ENSCARG00000046851) gnrhr1 (ENSCARG00000046846) ENSCARG00000046815 chrac1 (ENSCARG00000046800) ago2 (ENSCARG00000046197) dlx5a (ENSCARG00000046075) #22 dlx6a (ENSCARG00000046037) #23 sem1 (ENSCARG00000046014) #24 SLC25A13 (ENSCARG00000039810) #25 DYNC1I1 (ENSCARG00000035460) #28 pdk4 (ENSCARG00000034264) #29 asb4 (ENSCARG00000034152) #30 PPP1R9A (ENSCARG00000033588) #34 sgce (ENSCARG00000033350) #36 casd1 (ENSCARG00000033265) #37 col1a2 (ENSCARG00000029332) bet1 (ENSCARG00000029137) gngt1 (ENSCARG00000029067) tfpi2 (ENSCARG00000029059) CALCR (ENSCARG00000028273) VPS50 (ENSCARG00000027092) Cyprininae_a ANCESTRAL SPECIES 124 ENSGT00950000182907.a.a.ic.a.c ENSGT00740000116913 ENSGT00390000018319.b.b.b ENSGT00990000204496.a ENSGT00390000016136.r ENSGT00940000159209.b ENSGT00940000155689.k ENSGT00940000173087 ENSGT00940000154766.a.a.kb ENSGT00940000170013.a ENSGT00390000004097.b.k ENSGT01050000244841.A.a.a.b.b ENSGT00940000164559.A.e ENSGT00940000166127.b ENSGT00940000155239.c ENSGT00940000159188.g #22 ENSGT00940000157683.a #23 ENSGT00940000159344.j #25 ENSGT00940000156032.`b.b.b.c #28 ENSGT01030000234646.B.a.a.a.b.e #29 ENSGT00940000158874.c #30 ENSGT00940000155538.b #34 ENSGT00390000005672.a.b.g #36 ENSGT00390000004037.l #37 ENSGT00940000155639.w.a ENSGT00940000163414.c ENSGT00940000164410.a ENSGT00940000159917.b ENSGT00940000155380.d.b ENSGT00390000003442.a ENSGT01100000263551.b.b.b.b Common carp reference MODERN SPECIES 31 anp32e (ENSCCRG00000056899) si:ch211-191i18.2 (ENSCCRG00000081734) cart4 (ENSCCRG00000040166) si:ch211-191i18.4 (ENSCCRG00000058710) jtb (ENSCCRG00000070752) ENSCCRG00000081417 nfyc (ENSCCRG00000011270) ENSCCRG00000040036 trioa (ENSCCRG00000065642) tinagl1 (ENSCCRG00000002586) gatad2b (ENSCCRG00000045054) ENSCCRG00000045049 ENSCCRG00000033190 chrac1 (ENSCCRG00000042236) ago2 (ENSCCRG00000035846) dlx5a (ENSCCRG00000059693) #22 dlx6a (ENSCCRG00000058787) #23 SLC25A13 (ENSCCRG00000064911) #25 DYNC1I1 (ENSCCRG00000040559) #28 pdk4 (ENSCCRG00000037357) #29 asb4 (ENSCCRG00000037338) #30 PPP1R9A (ENSCCRG00000066506) #34 sgce (ENSCCRG00000021623) #36 casd1 (ENSCCRG00000021627) #37 ENSCCRG00000077343 col1a2 (ENSCCRG00000013700) bet1 (ENSCCRG00000065995) zgc:85777 (ENSCCRG00000004502) tfpi2 (ENSCCRG00000044569) gngt1 (ENSCCRG00000061382) CALCR (ENSCCRG00000013584) Golden-line barbel MODERN SPECIES 143 si:ch211-191i18.2 (ENSSGRG00000000239) cart4 (ENSSGRG00000000236) si:ch211-191i18.4 (ENSSGRG00000000231) jtb (ENSSGRG00000000227) KCNQ4 (ENSSGRG00000000201) nfyc (ENSSGRG00000000150) ENSSGRG00000053942 trioa (ENSSGRG00000053893) tinagl1 (ENSSGRG00000053859) gatad2b (ENSSGRG00000053855) gnrhr1 (ENSSGRG00000053853) ENSSGRG00000053852 ENSSGRG00000053850 chrac1 (ENSSGRG00000053849) ago2 (ENSSGRG00000053842) dlx5a (ENSSGRG00000053839) #22 dlx6a (ENSSGRG00000053838) #23 SLC25A13 (ENSSGRG00000053369) #25 DYNC1I1 (ENSSGRG00000053001) #28 pdk4 (ENSSGRG00000052831) #29 PPP1R9A (ENSSGRG00000052744) #34 sgce (ENSSGRG00000052605) #36 casd1 (ENSSGRG00000052587) #37 col1a2 (ENSSGRG00000052399) Cyprininae ANCESTRAL SPECIES 59 ENSGT00390000018319.b.b.a ENSGT00990000204496.b ENSGT00390000016136.q ENSGT00940000159209.a ENSGT00940000155689.l ENSGT00940000170761.a ENSGT00940000154766.a.a.jb ENSGT00940000170013.b ENSGT00390000004097.b.l ENSGT01050000244841.A.a.a.b.a ENSGT00940000164559.A.f ENSGT00390000010652.A.b ENSGT00940000166127.a ENSGT00940000176913 ENSGT00940000155239.d ENSGT00940000159188.h #22 ENSGT00940000157683.b #23 ENSGT00940000162732 #24 ENSGT00940000159344.i #25 ENSGT00940000156032.`b.b.b.d #28 ENSGT01030000234646.B.a.a.a.b.f #29 ENSGT00940000158874.d #30 ENSGT00940000155538.a #34 ENSGT00390000005672.a.b.h #36 ENSGT00390000004037.k #37 ENSGT00940000155639.w.b ENSGT00940000163414.d ENSGT00940000164410.b ENSGT01100000263525.b.b ENSGT00940000159917.a ENSGT00940000155380.d.a Goldfish MODERN SPECIES 10 cart4 (ENSCARG00000046737) si:ch211-191i18.4 (ENSCARG00000046753) jtb (ENSCARG00000046763) KCNQ4 (ENSCARG00000046777) nfyc (ENSCARG00000046827) ENSCARG00000046874 trioa (ENSCARG00000046974) tinagl1 (ENSCARG00000047531) gatad2b (ENSCARG00000047830) gnrhr1 (ENSCARG00000047855) ENSCARG00000047891 ENSCARG00000047923 ENSCARG00000048040 chrac1 (ENSCARG00000048069) ago2 (ENSCARG00000048183) dlx5a (ENSCARG00000049385) #22 DLX6 (ENSCARG00000049406) #23 sem1 (ENSCARG00000049437) #24 SLC25A13 (ENSCARG00000049510) #25 pdk4 (ENSCARG00000049871) #29 PPP1R9A (ENSCARG00000050506) #34 sgce (ENSCARG00000050615) #36 casd1 (ENSCARG00000050967) #37 col1a2 (ENSCARG00000051222) zgc:85777 (ENSCARG00000052278) bet1 (ENSCARG00000052429) gngt1 (ENSCARG00000024567) tfpi2 (ENSCARG00000024572) CALCR (ENSCARG00000024605) VPS50 (ENSCARG00000024902) hepacam2 (ENSCARG00000026397) Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00390000018319.b.b.a ENSGT00990000204496.b ENSGT00390000016136.q ENSGT00940000159209.a ENSGT00940000155689.l ENSGT00940000170761.a ENSGT00940000154766.a.a.jb ENSGT00940000170013.b ENSGT00390000004097.b.l ENSGT01050000244841.A.a.a.b.a ENSGT00940000164559.A.f ENSGT00390000010652.A.b ENSGT00940000166127.a ENSGT00940000176913 ENSGT00940000155239.d ENSGT00940000159188.h #22 ENSGT00940000157683.b #23 ENSGT00940000162732 #24 ENSGT00940000159344.i #25 ENSGT00940000156032.`b.b.b.d #28 ENSGT01030000234646.B.a.a.a.b.f #29 ENSGT00940000158874.d #30 ENSGT00940000155538.a #34 ENSGT00390000005672.a.b.h #36 ENSGT00390000004037.k #37 ENSGT00940000155639.w.b ENSGT00940000163414.d ENSGT00940000164410.b ENSGT01100000263525.b.b ENSGT00940000159917.a ENSGT00940000155380.d.a Common carp reference MODERN SPECIES 12 anp32e (ENSCCRG00000072614) cart4 (ENSCCRG00000051580) si:ch211-191i18.4 (ENSCCRG00000011391) ENSCCRG00000011381 nfyc (ENSCCRG00000040046) ENSCCRG00000064291 trioa (ENSCCRG00000056942) tinagl1 (ENSCCRG00000041700) gatad2b (ENSCCRG00000064208) ENSCCRG00000068556 ENSCCRG00000035937 ENSCCRG00000035932 chrac1 (ENSCCRG00000035924) ENSCCRG00000060359 ago2 (ENSCCRG00000057423) dlx5a (ENSCCRG00000053124) #22 DLX6 (ENSCCRG00000035836) #23 sem1 (ENSCCRG00000035802) #24 SLC25A13 (ENSCCRG00000005167) #25 ENSCCRG00000062008 ENSCCRG00000002811 #28 pdk4 (ENSCCRG00000005131) #29 PPP1R9A (ENSCCRG00000004980) #34 sgce (ENSCCRG00000004691) #36 casd1 (ENSCCRG00000004560) #37 col1a2 (ENSCCRG00000072549) zgc:85777 (ENSCCRG00000055868) bet1 (ENSCCRG00000081813) tfpi2 (ENSCCRG00000048504) ENSCCRG00000048672 VPS50 (ENSCCRG00000054843) Golden-line barbel MODERN SPECIES 172 anp32e (ENSSGRG00000041952) ENSSGRG00000041951 cart4 (ENSSGRG00000041950) si:ch211-191i18.4 (ENSSGRG00000041949) jtb (ENSSGRG00000041948) KCNQ4 (ENSSGRG00000041947) nfyc (ENSSGRG00000041943) ENSSGRG00000041942 trioa (ENSSGRG00000041920) tinagl1 (ENSSGRG00000041814) gatad2b (ENSSGRG00000041812) gnrhr1 (ENSSGRG00000041810) ENSSGRG00000041808 ENSSGRG00000041806 ago2 (ENSSGRG00000037135) dlx5a (ENSSGRG00000037066) #22 DLX6 (ENSSGRG00000037065) #23 sem1 (ENSSGRG00000037064) #24 SLC25A13 (ENSSGRG00000037062) #25 DYNC1I1 (ENSSGRG00000037061) #28 ENSSGRG00000037059 pdk4 (ENSSGRG00000036963) #29 asb4 (ENSSGRG00000036958) #30 PPP1R9A (ENSSGRG00000036909) #34 sgce (ENSSGRG00000036168) #36 col1a2 (ENSSGRG00000035415) bet1 (ENSSGRG00000035393) zgc:85777 (ENSSGRG00000035363) gngt1 (ENSSGRG00000035362) tfpi2 (ENSSGRG00000035361) Zebrafish MODERN SPECIES 10 si:ch211-191i18.4 (ENSDARG00000095328) jtb (ENSDARG00000070150) ENSDARG00000103818 ENSDARG00000113576 ENSDARG00000089490 nfyc (ENSDARG00000070151) si:ch211-13c6.2 (ENSDARG00000027738) trioa (ENSDARG00000019426) tinagl1 (ENSDARG00000061231) gatad2b (ENSDARG00000005834) ENSDARG00000078557 ENSDARG00000074910 chrac1 (ENSDARG00000042337) ENSDARG00000099891 ago2 (ENSDARG00000061268) dlx5a (ENSDARG00000042296) #22 dlx6a (ENSDARG00000042291) #23 sem1 (ENSDARG00000027899) #24 SLC25A13 (ENSDARG00000099353) #25 pdk4 (ENSDARG00000054848) #29 asb4 (ENSDARG00000034988) #30 PPP1R9A (ENSDARG00000061304) #34 sgce (ENSDARG00000012138) #36 casd1 (ENSDARG00000023900) #37 col1a2 (ENSDARG00000020007) ENSDARG00000094634 bet1 (ENSDARG00000034885) zgc:85777 (ENSDARG00000027009) gngt1 (ENSDARG00000035798) tfpi2 (ENSDARG00000061351) ENSDARG00000070215 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00390000007486 ENSGT00990000203802 ENSGT00390000017955.d ENSGT01030000236049 ENSGT00940000156245.a.b ENSGT00940000153253.a ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Protacanthopterygii ANCESTRAL SPECIES ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00390000007486 ENSGT00990000203802 ENSGT00390000017955.d ENSGT00940000156245.a.b ENSGT00940000153253.a ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683.e #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT00940000156032.`b.b.b #28 ENSGT00940000156032.`b.b.a.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 136 ENSGT00940000155689.o ENSGT00950000183094.b.b.c ENSGT00980000200411 ENSGT01050000244890.a.a.a.g.c ENSGT00940000159758.h.a ENSGT00390000007486.c ENSGT00390000017955.d.g ENSGT00940000156245.a.b.d ENSGT00940000153253.a.c ENSGT00530000063576.B.a.b.b ENSGT00390000005801 ENSGT00440000033589.d.b.c ENSGT00390000018554.f.b ENSGT00940000166127.d ENSGT00940000155239.f ENSGT00940000159188.i #22 ENSGT00940000157683.e.b #23 ENSGT00940000162732.a #24 ENSGT00940000159344.l #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b.h #29 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000155689.o ENSGT00950000183094.b.b.c ENSGT00980000200411 ENSGT01050000244890.a.a.a.g.c ENSGT00940000159758.h.a ENSGT00390000007486.c ENSGT00390000017955.d.g ENSGT00940000156245.a.b.d ENSGT00940000153253.a.c ENSGT00530000063576.B.a.b.b ENSGT00390000005801 ENSGT00440000033589.d.b.c ENSGT00390000018554.f.b ENSGT00940000166127.d ENSGT00940000155239.f ENSGT00940000159188.i #22 ENSGT00940000157683.e.b #23 ENSGT00940000162732.a #24 ENSGT00940000159344.l #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b.h #29 ENSGT00940000155538.d.a #34 ENSGT00390000005672.a.b.b #36 ENSGT00390000004037.m #37 ENSGT00940000155639.p.a ENSGT00940000163414.e ENSGT00940000164410.e ENSGT00990000204445.a.c ENSGT00940000159917.d ENSGT00940000177895 ENSGT00940000155380.td Salmo ANCESTRAL SPECIES 2 ENSGT00950000183094.b.b.c ENSGT00980000200411 ENSGT01050000244890.a.a.a.g.c ENSGT00940000159758.h.a ENSGT00390000007486.c ENSGT00390000017955.d.g ENSGT00940000156245.a.b.d ENSGT00990000210909 ENSGT00940000153253.a.c ENSGT00530000063576.B.a.b.b ENSGT00390000005801.c ENSGT00440000033589.d.b.c ENSGT00390000018554.f.b ENSGT00940000166127.d ENSGT00940000155239.f ENSGT00940000159188.i #22 ENSGT00940000157683.e.b #23 ENSGT00940000162732.a #24 ENSGT00940000159344.l #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b.g.a.b #29 ENSGT01030000234646.B.a.a.a.b.h #29 ENSGT00940000155538.d.a #34 ENSGT00390000005672.a.b.b #36 ENSGT00390000004037.m #37 ENSGT00940000155639.p.a ENSGT00940000163414.e ENSGT00940000164410.e ENSGT00990000204445.a.c ENSGT00940000159917.d ENSGT00940000177895 Atlantic salmon MODERN SPECIES 5 nfyc (ENSSSAG00000058435) ENSSSAG00000058408 ENSSSAG00000058405 grinaa (ENSSSAG00000058399) mapk15 (ENSSSAG00000058382) cap2 (ENSSSAG00000058188) ENSSSAG00000102627 ENSSSAG00000058158 ENSSSAG00000058134 ENSSSAG00000047545 ENSSSAG00000057888 ENSSSAG00000093638 ENSSSAG00000057845 chrac1 (ENSSSAG00000082680) ago2 (ENSSSAG00000057049) dlx5a (ENSSSAG00000083966) #22 dlx6a (ENSSSAG00000100413) #23 SLC25A13 (ENSSSAG00000055623) #25 DYNC1I1 (ENSSSAG00000054789) #28 pdk4 (ENSSSAG00000053275) #29 PPP1R9A (ENSSSAG00000053010) #34 sgce (ENSSSAG00000047882) #36 casd1 (ENSSSAG00000094782) #37 col1a2 (ENSSSAG00000046988) bet1 (ENSSSAG00000084047) zgc:85777 (ENSSSAG00000046931) ENSSSAG00000046920 tfpi2 (ENSSSAG00000046914) ENSSSAG00000109287 CALCR (ENSSSAG00000045529) vps50 (ENSSSAG00000027129) River trout MODERN SPECIES 29 RPRD1A (ENSSTUG00000040062) ENSSTUG00000040085 grinaa (ENSSTUG00000040092) mapk15 (ENSSTUG00000040114) vps28 (ENSSTUG00000040131) cap2 (ENSSTUG00000040142) rbm24a (ENSSTUG00000040340) ENSSTUG00000040346 nup153 (ENSSTUG00000040354) PTDSS1 (ENSSTUG00000040457) mterf3 (ENSSTUG00000040496) ENSSTUG00000040672 gatad1 (ENSSTUG00000040699) chrac1 (ENSSTUG00000040730) ago2 (ENSSTUG00000040765) dlx5a (ENSSTUG00000041310) #22 dlx6a (ENSSTUG00000041323) #23 sem1 (ENSSTUG00000041359) #24 SLC25A13 (ENSSTUG00000041454) #25 DYNC1I1 (ENSSTUG00000043258) #28 ENSSTUG00000043271 pdk4 (ENSSTUG00000043289) #29 PPP1R9A (ENSSTUG00000043370) #34 sgce (ENSSTUG00000043637) #36 casd1 (ENSSTUG00000043857) #37 col1a2 (ENSSTUG00000043917) bet1 (ENSSTUG00000043951) ENSSTUG00000043957 tfpi2 (ENSSTUG00000043964) ENSSTUG00000043966 CALCR (ENSSTUG00000043987) Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000155689.o ENSGT00950000183094.b.b.c ENSGT00980000200411 ENSGT01050000244890.a.a.a.g.c ENSGT00940000159758.h.a ENSGT00390000007486.c ENSGT00390000017955.d.g ENSGT00940000156245.a.b.d ENSGT00940000153253.a.c ENSGT00530000063576.B.a.b.b ENSGT00390000005801 ENSGT00440000033589.d.b.c ENSGT00390000018554.f.b ENSGT00940000166127.d ENSGT00940000155239.f ENSGT00940000159188.i #22 ENSGT00940000157683.e.b #23 ENSGT00940000162732.a #24 ENSGT00940000159344.l #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b.h #29 ENSGT00940000155538.d.a #34 ENSGT00390000005672.a.b.b #36 ENSGT00390000004037.m #37 ENSGT00940000155639.p.a ENSGT00940000163414.e ENSGT00940000164410.e ENSGT00990000204445.a.c ENSGT00940000159917.d ENSGT00940000155380.td ENSGT00390000003442.i.b Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000155689.o ENSGT00950000183094.b.b.c ENSGT00980000200411 ENSGT01050000244890.a.a.a.g.c ENSGT00940000159758.h.a ENSGT00390000007486.c ENSGT00390000017955.d.g ENSGT00940000156245.a.b.d ENSGT00940000153253.a.c ENSGT00530000063576.B.a.b.b ENSGT00390000005801 ENSGT00440000033589.d.b.c ENSGT00390000018554.f.b ENSGT00940000166127.d ENSGT00940000155239.f ENSGT00940000159188.i #22 ENSGT00940000157683.e.b #23 ENSGT00940000162732.a #24 ENSGT00940000159344.l #25 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b.h #29 ENSGT00940000155538.d.a #34 ENSGT00390000005672.a.b.b #36 ENSGT00390000004037.m #37 ENSGT00940000155639.p.a ENSGT00940000163414.e ENSGT00940000164410.e ENSGT00990000204445.a.c ENSGT00940000159917.d ENSGT00940000155380.td ENSGT00390000003442.i.b Coho salmon MODERN SPECIES 5 ENSOKIG00005022278 grinaa (ENSOKIG00005022250) mapk15 (ENSOKIG00005022236) vps28 (ENSOKIG00005022228) cap2 (ENSOKIG00005022046) rbm24a (ENSOKIG00005022034) nup153 (ENSOKIG00005022003) PTDSS1 (ENSOKIG00005021955) mterf3 (ENSOKIG00005021918) lrrc14b (ENSOKIG00005021899) ENSOKIG00005021892 ENSOKIG00005021885 gatad1 (ENSOKIG00005021864) chrac1 (ENSOKIG00005021849) ago2 (ENSOKIG00005021457) dlx5a (ENSOKIG00005021408) #22 dlx6a (ENSOKIG00005021374) #23 sem1 (ENSOKIG00005021358) #24 SLC25A13 (ENSOKIG00005021085) #25 DYNC1I1 (ENSOKIG00005017639) #28 pdk4 (ENSOKIG00005017274) #29 PPP1R9A (ENSOKIG00005017199) #34 sgce (ENSOKIG00005017074) #36 casd1 (ENSOKIG00005017012) #37 col1a2 (ENSOKIG00005016895) bet1 (ENSOKIG00005016870) zgc:85777 (ENSOKIG00005016852) ENSOKIG00005016849 tfpi2 (ENSOKIG00005016834) ENSOKIG00005016828 CALCR (ENSOKIG00005016731) Chinook salmon MODERN SPECIES 24 nfyc (ENSOTSG00005008444) RPRD1A (ENSOTSG00005008710) ENSOTSG00005008714 grinaa (ENSOTSG00005008715) mapk15 (ENSOTSG00005008717) vps28 (ENSOTSG00005008719) cap2 (ENSOTSG00005008724) rbm24a (ENSOTSG00005008841) nup153 (ENSOTSG00005008842) PTDSS1 (ENSOTSG00005008847) mterf3 (ENSOTSG00005008848) ENSOTSG00005008851 ENSOTSG00005008852 gatad1 (ENSOTSG00005008859) ago2 (ENSOTSG00005008891) dlx5a (ENSOTSG00005013786) #22 dlx6a (ENSOTSG00005013787) #23 sem1 (ENSOTSG00005013788) #24 SLC25A13 (ENSOTSG00005013794) #25 ENSOTSG00005013997 #28 ENSOTSG00005014003 #28 pdk4 (ENSOTSG00005014008) #29 PPP1R9A (ENSOTSG00005014092) #34 casd1 (ENSOTSG00005014106) #37 col1a2 (ENSOTSG00005014170) bet1 (ENSOTSG00005014255) zgc:85777 (ENSOTSG00005014256) ENSOTSG00005014264 tfpi2 (ENSOTSG00005014265) CALCR (ENSOTSG00005014273) ENSOTSG00005014891 Rainbow trout MODERN SPECIES 24 ENSOMYG00000064546 ENSOMYG00000060583 ENSOMYG00000011312 grinaa (ENSOMYG00000011338) mapk15 (ENSOMYG00000011369) vps28 (ENSOMYG00000011390) cap2 (ENSOMYG00000011405) rbm24a (ENSOMYG00000011499) ENSOMYG00000011509 ENSOMYG00000011527 ENSOMYG00000011545 ENSOMYG00000064707 ENSOMYG00000011591 chrac1 (ENSOMYG00000011609) ago2 (ENSOMYG00000011675) dlx5a (ENSOMYG00000012058) #22 dlx6a (ENSOMYG00000012069) #23 dss1 (ENSOMYG00000012077) #24 ENSOMYG00000048885 SLC25A13 (ENSOMYG00000012128) #25 DYNC1I1 (ENSOMYG00000012273) #28 pdk4 (ENSOMYG00000013044) #29 ENSOMYG00000062374 PPP1R9A (ENSOMYG00000013088) #34 sgce (ENSOMYG00000013169) #36 casd1 (ENSOMYG00000013526) #37 col1a2 (ENSOMYG00000013646) bet1 (ENSOMYG00000061160) zgc:85777 (ENSOMYG00000013909) ENSOMYG00000060307 tfpi2 (ENSOMYG00000013946) Huchen MODERN SPECIES 1070 mapk15 (ENSHHUG00000016912) vps28 (ENSHHUG00000016904) cap2 (ENSHHUG00000016881) rbm24a (ENSHHUG00000016878) ENSHHUG00000016866 ENSHHUG00000016863 nup153 (ENSHHUG00000016837) ENSHHUG00000016831 ENSHHUG00000016824 mterf3 (ENSHHUG00000016775) ENSHHUG00000016760 gatad1 (ENSHHUG00000016752) ENSHHUG00000016733 ago2 (ENSHHUG00000015896) dlx5a (ENSHHUG00000015871) #22 dlx6a (ENSHHUG00000015854) #23 sem1 (ENSHHUG00000015852) #24 SLC25A13 (ENSHHUG00000015829) #25 DYNC1I1 (ENSHHUG00000015411) #28 Salmoninae ANCESTRAL SPECIES 48 ENSGT00390000017955.d.h ENSGT00940000156245.a.b.c ENSGT00950000183135.A.a ENSGT00940000153253.a.d ENSGT00530000063576.B.a.b.a ENSGT00940000173300 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b.d ENSGT00940000161455 ENSGT00940000165985.e ENSGT00940000159541 ENSGT00390000018554.f.a ENSGT00940000166127.c ENSGT00940000155239.e ENSGT00940000159188.j #22 ENSGT00940000157683.e.a #23 ENSGT00940000162732.b #24 ENSGT00940000159344.k #25 ENSGT00940000156032.`b.b.a.b #28 ENSGT01030000234646.B.a.a.a.b.g.a.a #29 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b.g.b #29 ENSGT00940000158874 #30 ENSGT00940000155538.d.b #34 ENSGT00390000005672.a.b.a #36 ENSGT00390000004037.n #37 ENSGT00940000155639.p.b ENSGT00940000163414.f ENSGT00940000175665 ENSGT00940000164410.f Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000159758.h.b ENSGT00390000007486.d ENSGT00990000203802 ENSGT00390000017955.d.h ENSGT00940000156245.a.b.c ENSGT00950000183135.A.a ENSGT00940000153253.a.d ENSGT00530000063576.B.a.b.a ENSGT00940000173300 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b.d ENSGT00390000018554.f.a ENSGT00940000166127.c ENSGT00940000155239.e ENSGT00940000159188.j #22 ENSGT00940000157683.e.a #23 ENSGT00940000162732.b #24 ENSGT00940000159344.k #25 ENSGT00940000156032.`b.b.a.b #28 ENSGT01030000234646.B.a.a.a.b.g.a.a #29 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b.g.b #29 ENSGT00940000158874 #30 ENSGT00940000155538.d.b #34 ENSGT00390000005672.a.b.a #36 ENSGT00390000004037.n #37 ENSGT00940000155639.p.b ENSGT00940000163414.f ENSGT00940000164410.f ENSGT00990000204445.a.d.a Salmo ANCESTRAL SPECIES 2 ENSGT00940000159758.h.b ENSGT00390000007486.d ENSGT00990000203802 ENSGT00390000017955.d.h ENSGT00940000156245.a.b.c ENSGT00950000183135.A.a ENSGT00940000153253.a.d ENSGT00530000063576.B.a.b.a ENSGT00390000005801.d ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b.d ENSGT00390000018554.f.a ENSGT00940000166127.c ENSGT00940000155239.e ENSGT00940000159188.j #22 ENSGT00940000157683.e.a #23 ENSGT00940000162732.b #24 ENSGT00940000159344.k #25 ENSGT00940000156032.`b.b.a.b #28 ENSGT01030000234646.B.a.a.a.b.g.a.a #29 ENSGT00940000158874 #30 ENSGT00940000155538.d.b #34 ENSGT00390000005672.a.b.a #36 ENSGT00390000004037.n #37 ENSGT00940000155639.p.b ENSGT00940000163414.f ENSGT00940000164410.f ENSGT00990000204445.a.d.a ENSGT00940000159917.c ENSGT00940000155380.ud Atlantic salmon MODERN SPECIES 19 ENSSSAG00000046875 ENSSSAG00000047124 grinaa (ENSSSAG00000047153) ENSSSAG00000095343 cap2 (ENSSSAG00000047393) ENSSSAG00000047472 ENSSSAG00000047460 PTDSS1 (ENSSSAG00000057950) mterf3 (ENSSSAG00000047981) uqcrb (ENSSSAG00000047957) lrrc14b (ENSSSAG00000103287) ENSSSAG00000094989 catsper4 (ENSSSAG00000048087) ENSSSAG00000048099 ago2 (ENSSSAG00000048206) dlx5a (ENSSSAG00000050594) #22 dlx6a (ENSSSAG00000086284) #23 SLC25A13 (ENSSSAG00000106435) #25 DYNC1I1 (ENSSSAG00000058478) #28 pdk4 (ENSSSAG00000064446) #29 asb4 (ENSSSAG00000065532) #30 PPP1R9A (ENSSSAG00000065549) #34 sgce (ENSSSAG00000065720) #36 casd1 (ENSSSAG00000067730) #37 col1a2 (ENSSSAG00000067809) bet1 (ENSSSAG00000068998) zgc:85777 (ENSSSAG00000069007) ENSSSAG00000109521 TFPI2 (ENSSSAG00000069027) ENSSSAG00000095030 CALCR (ENSSSAG00000069062) River trout MODERN SPECIES 27 vps28 (ENSSTUG00000022001) ENSSTUG00000022014 cap2 (ENSSTUG00000022036) rbm24a (ENSSTUG00000022380) ENSSTUG00000022384 nup153 (ENSSTUG00000022401) PTDSS1 (ENSSTUG00000022439) uqcrb (ENSSTUG00000022484) ENSSTUG00000022520 lrrc14b (ENSSTUG00000022594) ENSSTUG00000022602 ENSSTUG00000022627 gatad1 (ENSSTUG00000022652) chrac1 (ENSSTUG00000022670) ago2 (ENSSTUG00000022695) dlx5a (ENSSTUG00000022872) #22 dlx6a (ENSSTUG00000022881) #23 sem1 (ENSSTUG00000035519) #24 SLC25A13 (ENSSTUG00000035528) #25 DYNC1I1 (ENSSTUG00000035595) #28 pdk4 (ENSSTUG00000037451) #29 asb4 (ENSSTUG00000037601) #30 PPP1R9A (ENSSTUG00000037635) #34 sgce (ENSSTUG00000037984) #36 casd1 (ENSSTUG00000038477) #37 col1a2 (ENSSTUG00000038533) bet1 (ENSSTUG00000039181) zgc:85777 (ENSSTUG00000039192) ENSSTUG00000039278 tfpi2 (ENSSTUG00000039283) CALCR (ENSSTUG00000039334) Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00940000159758.h.b ENSGT00390000007486.d ENSGT00990000203802 ENSGT00390000017955.d.h ENSGT00940000156245.a.b.c ENSGT00950000183135.A.a ENSGT00940000153253.a.d ENSGT00530000063576.B.a.b.a ENSGT00940000173300 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b.d ENSGT00390000018554.f.a ENSGT00940000166127.c ENSGT00940000155239.e ENSGT00940000159188.j #22 ENSGT00940000157683.e.a #23 ENSGT00940000162732.b #24 ENSGT01030000234597.b.b.b.a.a.b ENSGT00940000159344.k #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b.g.b #29 ENSGT00940000158874 #30 ENSGT00940000155538.d.b #34 ENSGT00390000005672.a.b.a #36 ENSGT00390000004037.n #37 ENSGT00940000155639.p.b ENSGT00940000163414.f ENSGT00940000164410.f ENSGT00990000204445.a.d.a ENSGT00940000159917.c Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00940000159758.h.b ENSGT00390000007486.d ENSGT00990000203802 ENSGT00390000017955.d.h ENSGT00940000156245.a.b.c ENSGT00950000183135.A.a ENSGT00940000153253.a.d ENSGT00530000063576.B.a.b.a ENSGT00940000173300 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00440000033589.d.b.d ENSGT00390000018554.f.a ENSGT00940000166127.c ENSGT00940000155239.e ENSGT00940000159188.j #22 ENSGT00940000157683.e.a #23 ENSGT00940000162732.b #24 ENSGT01030000234597.b.b.b.a.a.b ENSGT00940000159344.k #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b.g.b #29 ENSGT00940000158874 #30 ENSGT00940000155538.d.b #34 ENSGT00390000005672.a.b.a #36 ENSGT00390000004037.n #37 ENSGT00940000155639.p.b ENSGT00940000163414.f ENSGT00940000164410.f.b ENSGT00990000204445.a.d.a ENSGT00940000159917.c Coho salmon MODERN SPECIES 8 vps28 (ENSOKIG00005038484) ENSOKIG00005038475 cap2 (ENSOKIG00005038014) rbm24a (ENSOKIG00005037976) ENSOKIG00005037959 ENSOKIG00005037903 PTDSS1 (ENSOKIG00005037131) ENSOKIG00005037090 uqcrb (ENSOKIG00005037037) lrrc14b (ENSOKIG00005037022) ENSOKIG00005037004 ENSOKIG00005036985 gatad1 (ENSOKIG00005036958) chrac1 (ENSOKIG00005036943) ago2 (ENSOKIG00005036580) dlx5a (ENSOKIG00005036509) #22 dlx6a (ENSOKIG00005036489) #23 sem1 (ENSOKIG00005036474) #24 ENSOKIG00005036464 SLC25A13 (ENSOKIG00005036156) #25 ENSOKIG00005036112 #28 pdk4 (ENSOKIG00005035985) #29 asb4 (ENSOKIG00005035966) #30 PPP1R9A (ENSOKIG00005035553) #34 sgce (ENSOKIG00005035273) #36 casd1 (ENSOKIG00005035194) #37 col1a2 (ENSOKIG00005034501) bet1 (ENSOKIG00005034463) ENSOKIG00005034450 zgc:85777 (ENSOKIG00005034350) zgc:85777 (ENSOKIG00005034276) Chinook salmon MODERN SPECIES 4 mapk15 (ENSOTSG00005006065) vps28 (ENSOTSG00005006062) ENSOTSG00005006061 cap2 (ENSOTSG00005006060) ENSOTSG00005006058 nup153 (ENSOTSG00005006057) PTDSS1 (ENSOTSG00005006039) ENSOTSG00005006033 uqcrb (ENSOTSG00005006032) lrrc14b (ENSOTSG00005006030) ENSOTSG00005006029 ENSOTSG00005006027 gatad1 (ENSOTSG00005006018) chrac1 (ENSOTSG00005006015) ago2 (ENSOTSG00005004840) dlx5a (ENSOTSG00005004827) #22 dlx6a (ENSOTSG00005004826) #23 sem1 (ENSOTSG00005004824) #24 ENSOTSG00005004823 ENSOTSG00005004822 pdk4 (ENSOTSG00005004816) #29 asb4 (ENSOTSG00005004806) #30 ENSOTSG00005004804 #34 sgce (ENSOTSG00005004131) #36 casd1 (ENSOTSG00005004123) #37 col1a2 (ENSOTSG00005003152) bet1 (ENSOTSG00005003118) zgc:85777 (ENSOTSG00005003117) ENSOTSG00005003114 tfpi2 (ENSOTSG00005003112) ENSOTSG00005003110 Rainbow trout MODERN SPECIES 9 mapk15 (ENSOMYG00000005633) vps28 (ENSOMYG00000005826) ENSOMYG00000005833 cap2 (ENSOMYG00000006398) rbm24a (ENSOMYG00000049823) ENSOMYG00000066338 ENSOMYG00000006993 ENSOMYG00000007068 uqcrb (ENSOMYG00000007126) ENSOMYG00000060217 lrrc14b (ENSOMYG00000007172) ENSOMYG00000007184 gatad1 (ENSOMYG00000007218) chrc1 (ENSOMYG00000007244) ago2 (ENSOMYG00000007677) dlx5a (ENSOMYG00000008113) #22 dlx6a (ENSOMYG00000008153) #23 ENSOMYG00000066585 ENSOMYG00000075845 sem1 (ENSOMYG00000008161) #24 SLC25A13 (ENSOMYG00000065288) #25 ENSOMYG00000008182 DYNC1I1 (ENSOMYG00000048475) #28 pdk4 (ENSOMYG00000008444) #29 asb4 (ENSOMYG00000008515) #30 PPP1R9A (ENSOMYG00000008650) #34 ENSOMYG00000055759 ENSOMYG00000073452 sgce (ENSOMYG00000008795) #36 casd1 (ENSOMYG00000008927) #37 col1a2 (ENSOMYG00000009373) Huchen MODERN SPECIES 757 rbm24a (ENSHHUG00000012646) ENSHHUG00000012653 ENSHHUG00000012656 ENSHHUG00000012658 ENSHHUG00000012659 ENSHHUG00000012661 PTDSS1 (ENSHHUG00000012664) ENSHHUG00000012677 uqcrb (ENSHHUG00000012687) lrrc14b (ENSHHUG00000012721) ENSHHUG00000012726 ENSHHUG00000012736 gatad1 (ENSHHUG00000012754) chrac1 (ENSHHUG00000012772) ago2 (ENSHHUG00000012785) dlx5a (ENSHHUG00000013408) #22 dlx6a (ENSHHUG00000013436) #23 sem1 (ENSHHUG00000013454) #24 ENSHHUG00000013464 Northern pike MODERN SPECIES 9 ENSELUG00000012134 ENSELUG00000028798 ENSELUG00000027674 ENSELUG00000000808 ENSELUG00000000809 NANOS2 (ENSELUG00000019091) nup153 (ENSELUG00000019108) PTDSS1 (ENSELUG00000019160) mterf3 (ENSELUG00000019194) QCR7 (ENSELUG00000032559) lrrc14b (ENSELUG00000000823) ENSELUG00000001211 gatad1 (ENSELUG00000034426) chrac1 (ENSELUG00000019288) ago2 (ENSELUG00000019378) dlx5a (ENSELUG00000019396) #22 dlx6a (ENSELUG00000000833) #23 sem1 (ENSELUG00000019441) #24 SLC25A13 (ENSELUG00000019498) #25 DYNC1I1 (ENSELUG00000019661) #28 pdk4 (ENSELUG00000019754) #29 asb4 (ENSELUG00000019772) #30 PPP1R9A (ENSELUG00000019810) #34 sgce (ENSELUG00000019839) #36 casd1 (ENSELUG00000019997) #37 col1a2 (ENSELUG00000020073) bet1 (ENSELUG00000020163) zgc:85777 (ENSELUG00000020194) ENSELUG00000028042 tfpi2 (ENSELUG00000020264) CALCR (ENSELUG00000020617) Acanthomorphata ANCESTRAL SPECIES 49 ENSGT00390000008096.C.b ENSGT00940000157121 ENSGT00940000155660.a ENSGT00530000063480.b ENSGT00530000063609.b.x ENSGT00390000004280 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000157121 ENSGT00940000155660.a ENSGT00940000154959 ENSGT00530000063480.b ENSGT00530000063609.b.x ENSGT00390000004280 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000179331 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 ENSGT00390000003442 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00530000063609.b.x ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000180587 ENSGT00940000156869 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 ENSGT00390000003442 Mangrove rivulus MODERN SPECIES 2 ENSKMAG00000019415 dazl (ENSKMAG00000019443) DNAH3 (ENSKMAG00000019500) ENSKMAG00000019608 tbc1d5 (ENSKMAG00000019660) ENSKMAG00000019741 ENSKMAG00000019757 ENSKMAG00000019769 ENSKMAG00000019800 igf2bp3 (ENSKMAG00000019838) ccdc126 (ENSKMAG00000019896) fam221a (ENSKMAG00000019913) npy (ENSKMAG00000019938) ENSKMAG00000019961 ago2 (ENSKMAG00000019999) dlx5a (ENSKMAG00000020028) #22 dlx6a (ENSKMAG00000020044) #23 sem1 (ENSKMAG00000020050) #24 DYNC1I1 (ENSKMAG00000020066) #28 pdk4 (ENSKMAG00000020123) #29 PPP1R9A (ENSKMAG00000000136) #34 sgce (ENSKMAG00000000351) #36 casd1 (ENSKMAG00000000407) #37 col1a2 (ENSKMAG00000000507) bet1 (ENSKMAG00000000756) zgc:85777 (ENSKMAG00000000710) gngt1 (ENSKMAG00000000785) tfpi2 (ENSKMAG00000000793) CALCR (ENSKMAG00000000807) VPS50 (ENSKMAG00000000934) hepacam2 (ENSKMAG00000001105) Turquoise killifish MODERN SPECIES 1618 C19H6ORF52 (ENSNFUG00015016058) ENSNFUG00015016071 GATAD2B (ENSNFUG00015016090) ENSNFUG00015016103 TBC1D5 (ENSNFUG00015016231) ENSNFUG00015018258 KCNH8 (ENSNFUG00015018264) ENSNFUG00015018514 GPNMB (ENSNFUG00015018516) igf2bp3 (ENSNFUG00015018551) CCDC126 (ENSNFUG00015019734) fam221a (ENSNFUG00015019741) NPY (ENSNFUG00015019759) ENSNFUG00015019777 ago2 (ENSNFUG00015019946) DLX5A (ENSNFUG00015022181) #22 dlx6a (ENSNFUG00015022183) #23 sem1 (ENSNFUG00015022189) #24 DYNC1I1 (ENSNFUG00015022254) #28 PDK4 (ENSNFUG00015023792) #29 asb4 (ENSNFUG00015023805) #30 ENSNFUG00015023809 #34 ENSNFUG00015023822 #34 sgce (ENSNFUG00015023847) #36 CASD1 (ENSNFUG00015024188) #37 COL1A2 (ENSNFUG00015024212) bet1 (ENSNFUG00015024255) OLA.3715 (ENSNFUG00015024258) gngt1 (ENSNFUG00015024262) TFPI2 (ENSNFUG00015024269) CABZ01081490.1 (ENSNFUG00015024273) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00530000063609.b.x ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000166841 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000166841 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b.h #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Poecilia ANCESTRAL SPECIES 24 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000166841 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b.h #28 ENSGT00940000156032.`b.b.a.a #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 NAME_6 ANCESTRAL SPECIES 344 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000166841 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b.h #28 Amazon molly MODERN SPECIES 389 ENSPFOG00000006311 ENSPFOG00000022339 igf2bp3 (ENSPFOG00000005971) ccdc126 (ENSPFOG00000005963) fam221a (ENSPFOG00000005943) npy (ENSPFOG00000021751) ENSPFOG00000005576 ago2 (ENSPFOG00000005321) dlx5a (ENSPFOG00000005189) #22 ENSPFOG00000005103 ENSPFOG00000005030 sem1 (ENSPFOG00000005003) #24 DYNC1I1 (ENSPFOG00000004865) #28 ENSPFOG00000004661 satb1a (ENSPFOG00000004509) tbc1d5 (ENSPFOG00000004071) ENSPFOG00000003495 ENSPFOG00000003548 DNAH3 (ENSPFOG00000003449) dazl (ENSPFOG00000003357) ENSPFOG00000003182 oxnad1 (ENSPFOG00000003073) ENSPFOG00000020429 ENSPFOG00000002982 Sailfin molly MODERN SPECIES 1107 ENSPLAG00000007697 igf2bp3 (ENSPLAG00000007777) ccdc126 (ENSPLAG00000007798) fam221a (ENSPLAG00000007815) npy (ENSPLAG00000007831) ENSPLAG00000007858 ago2 (ENSPLAG00000007911) dlx5a (ENSPLAG00000007928) #22 dlx6a (ENSPLAG00000007934) #23 ENSPLAG00000007954 Guppy MODERN SPECIES 441 ENSPREG00000001361 ENSPREG00000001385 ENSPREG00000001409 ENSPREG00000001422 tbc1d5 (ENSPREG00000001475) ENSPREG00000001606 ENSPREG00000001706 KCNH8 (ENSPREG00000001739) ENSPREG00000001773 igf2bp3 (ENSPREG00000001808) ccdc126 (ENSPREG00000001841) fam221a (ENSPREG00000001870) npy (ENSPREG00000001965) ENSPREG00000001998 ago2 (ENSPREG00000002072) dlx5a (ENSPREG00000002123) #22 dlx6a (ENSPREG00000002135) #23 ENSPREG00000002148 sem1 (ENSPREG00000002160) #24 DYNC1I1 (ENSPREG00000002205) #28 asb4 (ENSPREG00000002290) #30 PPP1R9A (ENSPREG00000002304) #34 sgce (ENSPREG00000002358) #36 casd1 (ENSPREG00000002427) #37 col1a2 (ENSPREG00000002508) bet1 (ENSPREG00000002633) zgc:85777 (ENSPREG00000002646) gngt1 (ENSPREG00000002684) tfpi2 (ENSPREG00000002710) CALCR (ENSPREG00000002720) VPS50 (ENSPREG00000002804) Platyfish MODERN SPECIES 4 ENSXMAG00000027381 ENSXMAG00000027874 ENSXMAG00000021242 ENSXMAG00000023317 ENSXMAG00000000895 tbc1d5 (ENSXMAG00000000878) satb1a (ENSXMAG00000000865) ENSXMAG00000000864 ENSXMAG00000000862 igf2bp3 (ENSXMAG00000027959) ccdc126 (ENSXMAG00000000841) fam221a (ENSXMAG00000000839) npy (ENSXMAG00000000838) ENSXMAG00000000822 ago2 (ENSXMAG00000000787) dlx5a (ENSXMAG00000023346) #22 dlx6a (ENSXMAG00000029724) #23 ENSXMAG00000000753 sem1 (ENSXMAG00000000752) #24 DYNC1I1 (ENSXMAG00000000722) #28 pdk4 (ENSXMAG00000000718) #29 asb4 (ENSXMAG00000000714) #30 PPP1R9A (ENSXMAG00000000712) #34 ENSXMAG00000022870 sgce (ENSXMAG00000000709) #36 casd1 (ENSXMAG00000000704) #37 col1a2 (ENSXMAG00000000698) zgc:85777 (ENSXMAG00000023712) bet1 (ENSXMAG00000000695) gngt1 (ENSXMAG00000024374) tfpi2 (ENSXMAG00000000682) NAME_4 ANCESTRAL SPECIES 107 ENSGT00530000063609.b.x ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 Mummichog MODERN SPECIES 2329 oxnad1 (ENSFHEG00000014203) ENSFHEG00000014208 dazl (ENSFHEG00000000634) DNAH3 (ENSFHEG00000014337) ENSFHEG00000014358 tbc1d5 (ENSFHEG00000014560) ENSFHEG00000014586 ENSFHEG00000015773 ENSFHEG00000015851 igf2bp3 (ENSFHEG00000015920) ccdc126 (ENSFHEG00000000397) fam221a (ENSFHEG00000015957) npy (ENSFHEG00000015976) ENSFHEG00000016006 ago2 (ENSFHEG00000016080) dlx5a (ENSFHEG00000016102) #22 dlx6a (ENSFHEG00000016125) #23 Sheepshead minnow MODERN SPECIES 210 oxnad1 (ENSCVAG00000009610) RFTN1 (ENSCVAG00000009601) dazl (ENSCVAG00000009591) ENSCVAG00000000715 tbc1d5 (ENSCVAG00000000276) satb1a (ENSCVAG00000009409) KCNH8 (ENSCVAG00000009230) ENSCVAG00000008983 ENSCVAG00000008949 igf2bp3 (ENSCVAG00000008891) ccdc126 (ENSCVAG00000008872) fam221a (ENSCVAG00000008865) npy (ENSCVAG00000000879) ENSCVAG00000008840 ago2 (ENSCVAG00000008763) dlx5a (ENSCVAG00000008663) #22 dlx6a (ENSCVAG00000008641) #23 Oryzias ANCESTRAL SPECIES 22 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Oryzias_a ANCESTRAL SPECIES 30 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Chinese medaka MODERN SPECIES 1110 ENSOSIG00000010200 ENSOSIG00000010214 oxnad1 (ENSOSIG00000010218) ENSOSIG00000010221 ENSOSIG00000010223 ENSOSIG00000010245 tbc1d5 (ENSOSIG00000010737) satb1a (ENSOSIG00000011025) KCNH8 (ENSOSIG00000011035) GPNMB (ENSOSIG00000011054) igf2bp3 (ENSOSIG00000011070) tra2a (ENSOSIG00000011240) npy (ENSOSIG00000011250) ENSOSIG00000011278 ago2 (ENSOSIG00000013325) dlx5a (ENSOSIG00000016818) #22 dlx6a (ENSOSIG00000016819) #23 sem1 (ENSOSIG00000016823) #24 DYNC1I1 (ENSOSIG00000016953) #28 pdk4 (ENSOSIG00000019817) #29 asb4 (ENSOSIG00000020407) #30 ENSOSIG00000020409 #36 ENSOSIG00000020413 #34 casd1 (ENSOSIG00000020418) #37 col1a2 (ENSOSIG00000020542) ENSOSIG00000022043 bet1 (ENSOSIG00000022046) zgc:85777 (ENSOSIG00000022062) gngt1 (ENSOSIG00000022064) tfpi2 (ENSOSIG00000022067) CALCR (ENSOSIG00000022084) Japanese Medaka HdrR MODERN SPECIES 2 oxnad1 (ENSORLG00000004904) RFTN1 (ENSORLG00000004886) dazl (ENSORLG00000004848) ENSORLG00000004834 tbc1d5 (ENSORLG00000004796) ENSORLG00000004761 KCNH8 (ENSORLG00000004750) ENSORLG00000004737 GPNMB (ENSORLG00000004727) igf2bp3 (ENSORLG00000004712) tra2a (ENSORLG00000022191) ccdc126 (ENSORLG00000023752) npy (ENSORLG00000004649) ENSORLG00000004642 AGO2 (ENSORLG00000004615) dlx5a (ENSORLG00000004561) #22 dlx6a (ENSORLG00000004542) #23 sem1 (ENSORLG00000027365) #24 DYNC1I1 (ENSORLG00000004516) #28 pdk4 (ENSORLG00000004460) #29 ENSORLG00000022924 asb4 (ENSORLG00000004430) #30 PPP1R9A (ENSORLG00000004418) #34 sgce (ENSORLG00000004392) #36 casd1 (ENSORLG00000004357) #37 ENSORLG00000029271 col1a2 (ENSORLG00000004319) bet1 (ENSORLG00000018402) zgc:85777 (ENSORLG00000029640) gngt1 (ENSORLG00000004180) tfpi2 (ENSORLG00000004168) Oryzias_b ANCESTRAL SPECIES 22 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000163409 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000179331 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 Indian medaka MODERN SPECIES 3 oxnad1 (ENSOMEG00000018467) RFTN1 (ENSOMEG00000018428) dazl (ENSOMEG00000018395) ENSOMEG00000018339 tbc1d5 (ENSOMEG00000018290) satb1a (ENSOMEG00000018126) KCNH8 (ENSOMEG00000018013) ENSOMEG00000017971 GPNMB (ENSOMEG00000017953) igf2bp3 (ENSOMEG00000017916) tra2a (ENSOMEG00000017864) ccdc126 (ENSOMEG00000017851) npy (ENSOMEG00000001014) ENSOMEG00000017820 ago2 (ENSOMEG00000017751) dlx5a (ENSOMEG00000017685) #22 dlx6a (ENSOMEG00000017680) #23 ENSOMEG00000017662 DYNC1I1 (ENSOMEG00000017610) #28 pdk4 (ENSOMEG00000017495) #29 asb4 (ENSOMEG00000017453) #30 PPP1R9A (ENSOMEG00000017415) #34 sgce (ENSOMEG00000017350) #36 casd1 (ENSOMEG00000017161) #37 col1a2 (ENSOMEG00000000803) ENSOMEG00000016940 bet1 (ENSOMEG00000016907) zgc:85777 (ENSOMEG00000016933) gngt1 (ENSOMEG00000016876) tfpi2 (ENSOMEG00000016854) CALCR (ENSOMEG00000016788) Javanese ricefish MODERN SPECIES 2 dbpa (ENSOJAG00000009015) ENSOJAG00000009026 cnot3b (ENSOJAG00000009059) ccdc106b (ENSOJAG00000009148) tmem238a (ENSOJAG00000009161) rcvrn3 (ENSOJAG00000009177) ENSOJAG00000009189 ENSOJAG00000009231 necap1 (ENSOJAG00000009254) ENSOJAG00000009290 ENSOJAG00000009305 ENSOJAG00000009368 slc39a7 (ENSOJAG00000009401) ENSOJAG00000005872 ago2 (ENSOJAG00000006102) dlx5a (ENSOJAG00000007222) #22 dlx6a (ENSOJAG00000007242) #23 sem1 (ENSOJAG00000007275) #24 ENSOJAG00000007294 DYNC1I1 (ENSOJAG00000007330) #28 pdk4 (ENSOJAG00000007649) #29 asb4 (ENSOJAG00000007949) #30 PPP1R9A (ENSOJAG00000008048) #34 sgce (ENSOJAG00000009046) #36 casd1 (ENSOJAG00000009202) #37 col1a2 (ENSOJAG00000009445) ENSOJAG00000011446 bet1 (ENSOJAG00000011458) zgc:85777 (ENSOJAG00000011468) gngt1 (ENSOJAG00000011527) tfpi2 (ENSOJAG00000011544) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Pomacentridae ANCESTRAL SPECIES 7 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Amphiprion ANCESTRAL SPECIES 16 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Orange clownfish MODERN SPECIES 8 ENSAPEG00000018991 ENSAPEG00000018987 ENSAPEG00000018980 tbc1d5 (ENSAPEG00000018871) satb1a (ENSAPEG00000018810) ENSAPEG00000018780 ENSAPEG00000018653 GPNMB (ENSAPEG00000018638) igf2bp3 (ENSAPEG00000018592) tra2a (ENSAPEG00000018557) ccdc126 (ENSAPEG00000018545) fam221a (ENSAPEG00000018529) npy (ENSAPEG00000018511) ENSAPEG00000018480 ago2 (ENSAPEG00000018425) dlx5a (ENSAPEG00000018406) #22 dlx6a (ENSAPEG00000018337) #23 sem1 (ENSAPEG00000018314) #24 SLC25A13 (ENSAPEG00000018252) #25 DYNC1I1 (ENSAPEG00000018148) #28 pdk4 (ENSAPEG00000018102) #29 asb4 (ENSAPEG00000018078) #30 PPP1R9A (ENSAPEG00000018009) #34 sgce (ENSAPEG00000017897) #36 casd1 (ENSAPEG00000017804) #37 col1a2 (ENSAPEG00000017655) bet1 (ENSAPEG00000017588) zgc:85777 (ENSAPEG00000017555) gngt1 (ENSAPEG00000017540) tfpi2 (ENSAPEG00000017506) CALCR (ENSAPEG00000017469) Clown anemonefish MODERN SPECIES 403 igf2bp3 (ENSAOCG00000015936) ENSAOCG00000015477 tra2a (ENSAOCG00000015445) ccdc126 (ENSAOCG00000015407) fam221a (ENSAOCG00000015385) npy (ENSAOCG00000015380) ENSAOCG00000015361 ago2 (ENSAOCG00000015307) dlx5a (ENSAOCG00000015242) #22 dlx6a (ENSAOCG00000015225) #23 sem1 (ENSAOCG00000015143) #24 Spiny chromis MODERN SPECIES 411 ENSAPOG00000017096 ENSAPOG00000017115 tbc1d5 (ENSAPOG00000017247) ENSAPOG00000017277 KCNH8 (ENSAPOG00000017292) ENSAPOG00000017309 GPNMB (ENSAPOG00000017314) igf2bp3 (ENSAPOG00000017377) tra2a (ENSAPOG00000017425) ccdc126 (ENSAPOG00000017436) fam221a (ENSAPOG00000017452) npy (ENSAPOG00000017473) ENSAPOG00000017487 ago2 (ENSAPOG00000017586) dlx5a (ENSAPOG00000017616) #22 dlx6a (ENSAPOG00000017638) #23 sem1 (ENSAPOG00000017650) #24 SLC25A13 (ENSAPOG00000017725) #25 Bicolor damselfish MODERN SPECIES 1638 ENSSPAG00000019603 ago2 (ENSSPAG00000019543) dlx5a (ENSSPAG00000019536) #22 dlx6a (ENSSPAG00000019527) #23 sem1 (ENSSPAG00000019522) #24 SLC25A13 (ENSSPAG00000019477) #25 Cichlidae ANCESTRAL SPECIES 7 ENSGT00530000063480.b ENSGT00940000154959.x.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00530000063480.b ENSGT00940000154959.x.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000154959.w ENSGT00940000154959.x.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000154959.w ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239.h ENSGT00940000155239.g.a ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Burton s mouthbrooder MODERN SPECIES 367 dazl (ENSHBUG00000017426) ENSHBUG00000017460 ENSHBUG00000017472 tbc1d5 (ENSHBUG00000017515) satb1a (ENSHBUG00000017651) KCNH8 (ENSHBUG00000018004) GALNT15 (ENSHBUG00000018069) GPNMB (ENSHBUG00000018133) igf2bp3 (ENSHBUG00000018217) tra2a (ENSHBUG00000018234) ccdc126 (ENSHBUG00000018240) fam221a (ENSHBUG00000018259) npy (ENSHBUG00000018277) ENSHBUG00000018379 ago2 (ENSHBUG00000018515) dlx5 (ENSHBUG00000018550) #22 dlx6 (ENSHBUG00000018576) #23 sem1 (ENSHBUG00000018678) #24 SLC25A13 (ENSHBUG00000018729) #25 DYNC1I1 (ENSHBUG00000018787) #28 pdk4 (ENSHBUG00000018817) #29 asb4 (ENSHBUG00000018833) #30 PPP1R9A (ENSHBUG00000000560) #34 sgce (ENSHBUG00000018971) #36 casd1 (ENSHBUG00000019054) #37 col1a2 (ENSHBUG00000019130) bet1 (ENSHBUG00000019157) zgc:85777 (ENSHBUG00000019198) gngt1 (ENSHBUG00000019212) tfpi2 (ENSHBUG00000019217) CALCR (ENSHBUG00000019323) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000154959.w ENSGT00940000154959.x.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239.h ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 P. nyererei MODERN SPECIES 325 ENSPNYG00000020505 dazl (ENSPNYG00000020484) ENSPNYG00000020478 tbc1d5 (ENSPNYG00000020431) satb1a (ENSPNYG00000020357) KCNH8 (ENSPNYG00000020303) GALNT15 (ENSPNYG00000020254) GPNMB (ENSPNYG00000020212) igf2bp3 (ENSPNYG00000020180) tra2a (ENSPNYG00000020134) ccdc126 (ENSPNYG00000020117) fam221a (ENSPNYG00000020102) npy (ENSPNYG00000020082) ENSPNYG00000020034 ago2 (ENSPNYG00000019928) dlx5a (ENSPNYG00000019903) #22 dlx6a (ENSPNYG00000019892) #23 sem1 (ENSPNYG00000019884) #24 SLC25A13 (ENSPNYG00000019842) #25 DYNC1I1 (ENSPNYG00000019803) #28 pdk4 (ENSPNYG00000019764) #29 asb4 (ENSPNYG00000019739) #30 PPP1R9A (ENSPNYG00000019665) #34 sgce (ENSPNYG00000019608) #36 casd1 (ENSPNYG00000019562) #37 col1a2 (ENSPNYG00000019493) bet1 (ENSPNYG00000019472) zgc:85777 (ENSPNYG00000019454) gngt1 (ENSPNYG00000019424) tfpi2 (ENSPNYG00000019401) CALCR (ENSPNYG00000019250) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000154959.w ENSGT00940000154959.x.b ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239.h ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005009496 ENSMZEG00005009477 ENSMZEG00005009457 tbc1d5 (ENSMZEG00005009376) satb1a (ENSMZEG00005009332) ENSMZEG00005009304 ENSMZEG00005009262 GPNMB (ENSMZEG00005009215) igf2bp3 (ENSMZEG00005009164) tra2a (ENSMZEG00005009142) ccdc126 (ENSMZEG00005009136) fam221a (ENSMZEG00005009119) npy (ENSMZEG00005009105) ENSMZEG00005009081 ago2 (ENSMZEG00005008998) dlx5a (ENSMZEG00005008988) #22 dlx6a (ENSMZEG00005008972) #23 sem1 (ENSMZEG00005008764) #24 SLC25A13 (ENSMZEG00005008730) #25 DYNC1I1 (ENSMZEG00005008570) #28 asb4 (ENSMZEG00005008524) #30 pdk4 (ENSMZEG00005008493) #29 PPP1R9A (ENSMZEG00005008423) #34 sgce (ENSMZEG00005008307) #36 casd1 (ENSMZEG00005008249) #37 col1a2 (ENSMZEG00005008145) bet1 (ENSMZEG00005008123) zgc:85777 (ENSMZEG00005008100) gngt1 (ENSMZEG00005008086) tfpi2 (ENSMZEG00005008078) CALCR (ENSMZEG00005008028) Eastern happy MODERN SPECIES 13 ENSACLG00000000493 tbc1d5 (ENSACLG00000000358) ENSACLG00000000341 satb1a (ENSACLG00000000178) ENSACLG00000000166 ENSACLG00000000148 GPNMB (ENSACLG00000000082) igf2bp3 (ENSACLG00000000050) tra2a (ENSACLG00000024845) ccdc126 (ENSACLG00000024839) fam221a (ENSACLG00000024830) npy (ENSACLG00000024823) ENSACLG00000024741 ago2 (ENSACLG00000024684) ENSACLG00000024671 dlx5a (ENSACLG00000024663) #22 dlx6a (ENSACLG00000024649) #23 sem1 (ENSACLG00000024578) #24 SLC25A13 (ENSACLG00000024494) #25 DYNC1I1 (ENSACLG00000024415) #28 asb4 (ENSACLG00000024381) #30 pdk4 (ENSACLG00000024317) #29 PPP1R9A (ENSACLG00000024305) #34 sgce (ENSACLG00000024270) #36 casd1 (ENSACLG00000024244) #37 col1a2 (ENSACLG00000023609) bet1 (ENSACLG00000023540) zgc:85777 (ENSACLG00000023519) gngt1 (ENSACLG00000023512) tfpi2 (ENSACLG00000023375) CALCR (ENSACLG00000023307) Lyretail cichlid MODERN SPECIES 302 dazl (ENSNBRG00000005425) ENSNBRG00000005462 ENSNBRG00000005550 tbc1d5 (ENSNBRG00000005765) satb1a (ENSNBRG00000005825) ENSNBRG00000005869 GALNT15 (ENSNBRG00000005894) GPNMB (ENSNBRG00000005918) igf2bp3 (ENSNBRG00000005961) tra2a (ENSNBRG00000005992) ccdc126 (ENSNBRG00000006012) fam221a (ENSNBRG00000006017) npy (ENSNBRG00000006043) ENSNBRG00000006059 ago2 (ENSNBRG00000006100) dlx5a (ENSNBRG00000006163) #22 dlx6a (ENSNBRG00000006177) #23 sem1 (ENSNBRG00000006187) #24 SLC25A13 (ENSNBRG00000006201) #25 DYNC1I1 (ENSNBRG00000006260) #28 pdk4 (ENSNBRG00000006313) #29 asb4 (ENSNBRG00000006357) #30 PPP1R9A (ENSNBRG00000006373) #34 sgce (ENSNBRG00000006424) #36 casd1 (ENSNBRG00000006482) #37 col1a2 (ENSNBRG00000006663) bet1 (ENSNBRG00000007672) zgc:85777 (ENSNBRG00000007692) gngt1 (ENSNBRG00000007723) tfpi2 (ENSNBRG00000007736) CALCR (ENSNBRG00000007771) Nile tilapia MODERN SPECIES 13 dazl (ENSONIG00000004563) ENSONIG00000039060 ENSONIG00000004560 tbc1d5 (ENSONIG00000004554) satb1a (ENSONIG00000004539) ENSONIG00000004527 GALNT15 (ENSONIG00000004516) GPNMB (ENSONIG00000004514) igf2bp3 (ENSONIG00000004506) tra2a (ENSONIG00000033161) ccdc126 (ENSONIG00000033679) fam221a (ENSONIG00000004501) npy (ENSONIG00000037888) ENSONIG00000004490 ago2 (ENSONIG00000010747) dlx5 (ENSONIG00000040151) #22 dlx6 (ENSONIG00000035762) #23 sem1 (ENSONIG00000041347) #24 SLC25A13 (ENSONIG00000010758) #25 DYNC1I1 (ENSONIG00000010764) #28 pdk4 (ENSONIG00000010773) #29 asb4 (ENSONIG00000010780) #30 PPP1R9A (ENSONIG00000010783) #34 sgce (ENSONIG00000010788) #36 casd1 (ENSONIG00000010791) #37 col1a2 (ENSONIG00000010792) bet1 (ENSONIG00000040156) zgc:85777 (ENSONIG00000010806) gngt1 (ENSONIG00000010811) tfpi2 (ENSONIG00000037672) CALCR (ENSONIG00000010814) Midas cichlid MODERN SPECIES 563 dazl (ENSACIG00000001931) DNAH3 (ENSACIG00000001775) ENSACIG00000001735 tbc1d5 (ENSACIG00000001681) satb1a (ENSACIG00000001608) ENSACIG00000001575 ENSACIG00000001491 GPNMB (ENSACIG00000001432) igf2bp3 (ENSACIG00000001392) tra2a (ENSACIG00000001333) ccdc126 (ENSACIG00000001326) fam221a (ENSACIG00000001284) npy (ENSACIG00000001268) ENSACIG00000001238 ago2 (ENSACIG00000001179) dlx5a (ENSACIG00000001172) #22 dlx6a (ENSACIG00000001161) #23 ENSACIG00000001146 SLC25A13 (ENSACIG00000001085) #25 DYNC1I1 (ENSACIG00000001041) #28 pdk4 (ENSACIG00000001001) #29 asb4 (ENSACIG00000000977) #30 PPP1R9A (ENSACIG00000000918) #34 sgce (ENSACIG00000000891) #36 casd1 (ENSACIG00000000834) #37 col1a2 (ENSACIG00000000453) bet1 (ENSACIG00000000413) zgc:85777 (ENSACIG00000000376) gngt1 (ENSACIG00000000345) tfpi2 (ENSACIG00000000272) CALCR (ENSACIG00000000196) Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a ENSGT00940000159917 ENSGT01100000263525.b.b Eupercaria ANCESTRAL SPECIES 11 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a ENSGT00940000159917 ENSGT01100000263525.b.b Tetraodontidae ANCESTRAL SPECIES 56 ENSGT00940000155660.a ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00940000154957.B ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b.d #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380.sd ENSGT00390000003442 Fugu MODERN SPECIES 3 sdc2 (ENSTRUG00000032163) angpt1 (ENSTRUG00000025321) abrab (ENSTRUG00000003433) SAMD12 (ENSTRUG00000003311) EXT1 (ENSTRUG00000002816) med30 (ENSTRUG00000003806) ENSTRUG00000003906 ENSTRUG00000005121 ENSTRUG00000005492 ENSTRUG00000005588 igf2bp3 (ENSTRUG00000006094) ccdc126 (ENSTRUG00000006674) fam221a (ENSTRUG00000033149) npy (ENSTRUG00000006827) ENSTRUG00000006945 dlx5a (ENSTRUG00000019997) #22 dlx6a (ENSTRUG00000007566) #23 ENSTRUG00000020257 DYNC1I1 (ENSTRUG00000020585) #28 pdk4 (ENSTRUG00000015972) #29 asb4 (ENSTRUG00000015951) #30 PPP1R9A (ENSTRUG00000015914) #34 sgce (ENSTRUG00000015890) #36 casd1 (ENSTRUG00000015861) #37 col1a2 (ENSTRUG00000015407) bet1 (ENSTRUG00000015403) zgc:85777 (ENSTRUG00000015393) gngt1 (ENSTRUG00000022037) tfpi2 (ENSTRUG00000015369) CALCR (ENSTRUG00000015319) VPS50 (ENSTRUG00000015181) Tetraodon MODERN SPECIES 16 EXT1 (ENSTNIG00000017747) med30 (ENSTNIG00000000448) ENSTNIG00000017748 tbc1d5 (ENSTNIG00000017749) ENSTNIG00000017750 ENSTNIG00000017751 ENSTNIG00000017752 ENSTNIG00000017753 ENSTNIG00000017754 igf2bp3 (ENSTNIG00000017755) ccdc126 (ENSTNIG00000017756) fam221a (ENSTNIG00000017757) npy (ENSTNIG00000017758) ENSTNIG00000017759 ago2 (ENSTNIG00000017760) dlx5a (ENSTNIG00000017761) #22 dlx6a (ENSTNIG00000017762) #23 sem1 (ENSTNIG00000017763) #24 DYNC1I1 (ENSTNIG00000017764) #28 col1a2 (ENSTNIG00000017765) bet1 (ENSTNIG00000017766) zgc:85777 (ENSTNIG00000017767) CALCR (ENSTNIG00000017768) VPS50 (ENSTNIG00000017769) hepacam2 (ENSTNIG00000017770) ENSTNIG00000001616 cdk6 (ENSTNIG00000017771) ENSTNIG00000017772 ENSTNIG00000017773 ENSTNIG00000017774 btd (ENSTNIG00000017775) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a ENSGT00940000159917 ENSGT01100000263525.b.b Ballan wrasse MODERN SPECIES 297 dazl (ENSLBEG00000006023) DNAH3 (ENSLBEG00000005767) ENSLBEG00000005694 tbc1d5 (ENSLBEG00000005629) satb1a (ENSLBEG00000005545) ENSLBEG00000005497 ENSLBEG00000005479 GPNMB (ENSLBEG00000005453) igf2bp3 (ENSLBEG00000005339) tra2a (ENSLBEG00000005297) ccdc126 (ENSLBEG00000005284) fam221a (ENSLBEG00000005254) npy (ENSLBEG00000005236) ENSLBEG00000005182 ago2 (ENSLBEG00000005112) dlx5a (ENSLBEG00000005078) #22 dlx6a (ENSLBEG00000005062) #23 sem1 (ENSLBEG00000005037) #24 DYNC1I1 (ENSLBEG00000004923) #28 pdk4 (ENSLBEG00000004851) #29 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a ENSGT00940000159917 ENSGT01100000263525.b.b Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00940000159917 ENSGT01100000263525.b.b ENSGT00940000155380 Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000163409 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00940000159917 ENSGT01100000263525.b.b ENSGT00940000155380 European seabass MODERN SPECIES 22 dazl (ENSDLAG00005002759) ENSDLAG00005003054 ENSDLAG00005005956 tbc1d5 (ENSDLAG00005006722) satb1a (ENSDLAG00005031860) ENSDLAG00005007626 ENSDLAG00005007909 GPNMB (ENSDLAG00005007926) igf2bp3 (ENSDLAG00005007961) tra2a (ENSDLAG00005008478) ccdc126 (ENSDLAG00005033349) fam221a (ENSDLAG00005008493) npy (ENSDLAG00005008510) ENSDLAG00005008554 ago2 (ENSDLAG00005009789) dlx5a (ENSDLAG00005034499) #22 dlx6a (ENSDLAG00005033876) #23 ENSDLAG00005010087 SLC25A13 (ENSDLAG00005010129) #25 DYNC1I1 (ENSDLAG00005011445) #28 pdk4 (ENSDLAG00005013551) #29 asb4 (ENSDLAG00005014867) #30 PPP1R9A (ENSDLAG00005014873) #34 sgce (ENSDLAG00005014947) #36 casd1 (ENSDLAG00005015184) #37 col1a2 (ENSDLAG00005015255) bet1 (ENSDLAG00005016856) zgc:85777 (ENSDLAG00005016872) tfpi2 (ENSDLAG00005016947) gngt1 (ENSDLAG00005031025) CALCR (ENSDLAG00005016993) Large yellow croaker MODERN SPECIES 484 dazl (ENSLCRG00005008918) DNAH3 (ENSLCRG00005008939) ENSLCRG00005011199 tbc1d5 (ENSLCRG00005011243) satb1a (ENSLCRG00005014537) ENSLCRG00005014559 ENSLCRG00005014856 GPNMB (ENSLCRG00005014861) igf2bp3 (ENSLCRG00005014865) ENSLCRG00005014959 ccdc126 (ENSLCRG00005014960) fam221a (ENSLCRG00005014961) npy (ENSLCRG00005014974) ENSLCRG00005014982 ago2 (ENSLCRG00005016042) dlx5a (ENSLCRG00005020152) #22 dlx6a (ENSLCRG00005020154) #23 ENSLCRG00005020156 SLC25A13 (ENSLCRG00005020163) #25 DYNC1I1 (ENSLCRG00005020182) #28 pdk4 (ENSLCRG00005020566) #29 asb4 (ENSLCRG00005020658) #30 PPP1R9A (ENSLCRG00005020668) #34 sgce (ENSLCRG00005020859) #36 casd1 (ENSLCRG00005021241) #37 col1a2 (ENSLCRG00005021256) bet1 (ENSLCRG00005021336) zgc:85777 (ENSLCRG00005021338) gngt1 (ENSLCRG00005021340) tfpi2 (ENSLCRG00005021342) CALCR (ENSLCRG00005021352) Gilthead seabream MODERN SPECIES 17 DNAH3 (ENSSAUG00010023021) ENSSAUG00010022956 tbc1d5 (ENSSAUG00010022263) satb1a (ENSSAUG00010022261) ENSSAUG00010022260 ENSSAUG00010022259 GALNT15 (ENSSAUG00010022257) GPNMB (ENSSAUG00010022256) igf2bp3 (ENSSAUG00010020965) tra2a (ENSSAUG00010020940) ccdc126 (ENSSAUG00010020938) fam221a (ENSSAUG00010020937) npy (ENSSAUG00010020936) ENSSAUG00010019199 ago2 (ENSSAUG00010013491) dlx5a (ENSSAUG00010013417) #22 dlx6a (ENSSAUG00010013414) #23 sem1 (ENSSAUG00010013413) #24 SLC25A13 (ENSSAUG00010009030) #25 DYNC1I1 (ENSSAUG00010004632) #28 pdk4 (ENSSAUG00010004262) #29 asb4 (ENSSAUG00010004189) #30 PPP1R9A (ENSSAUG00010004046) #34 sgce (ENSSAUG00010002284) #36 casd1 (ENSSAUG00010002217) #37 col1a2 (ENSSAUG00010001273) bet1 (ENSSAUG00010001231) zgc:85777 (ENSSAUG00010001229) gngt1 (ENSSAUG00010001227) tfpi2 (ENSSAUG00010001226) CALCR (ENSSAUG00010001175) Perciformes ANCESTRAL SPECIES 11 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000177895 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT00990000204445.a ENSGT00940000159917 ENSGT00940000177895 Channel bull blenny MODERN SPECIES 2 ENSCGOG00000002521 ENSCGOG00000002526 ENSCGOG00000002550 tbc1d5 (ENSCGOG00000002723) ENSCGOG00000004373 KCNH8 (ENSCGOG00000004375) GALNT15 (ENSCGOG00000004405) GPNMB (ENSCGOG00000004479) igf2bp3 (ENSCGOG00000004521) tra2a (ENSCGOG00000005185) ccdc126 (ENSCGOG00000005187) fam221a (ENSCGOG00000005188) npy (ENSCGOG00000005190) ENSCGOG00000005229 ago2 (ENSCGOG00000005879) dlx5a (ENSCGOG00000011958) #22 dlx6a (ENSCGOG00000011960) #23 sem1 (ENSCGOG00000011968) #24 SLC25A13 (ENSCGOG00000011972) #25 DYNC1I1 (ENSCGOG00000012026) #28 pdk4 (ENSCGOG00000013988) #29 asb4 (ENSCGOG00000014646) #30 PPP1R9A (ENSCGOG00000014658) #34 sgce (ENSCGOG00000014807) #36 casd1 (ENSCGOG00000014817) #37 col1a2 (ENSCGOG00000014901) zgc:85777 (ENSCGOG00000015297) bet1 (ENSCGOG00000015319) ENSCGOG00000015334 tfpi2 (ENSCGOG00000015337) CALCR (ENSCGOG00000015345) Pike perch MODERN SPECIES 41 dazl (ENSSLUG00000011304) DNAH3 (ENSSLUG00000011601) ENSSLUG00000014304 tbc1d5 (ENSSLUG00000014419) satb1a (ENSSLUG00000014957) KCNH8 (ENSSLUG00000001500) ENSSLUG00000001516 GPNMB (ENSSLUG00000001528) igf2bp3 (ENSSLUG00000001733) tra2a (ENSSLUG00000001878) ccdc126 (ENSSLUG00000001888) fam221a (ENSSLUG00000001895) npy (ENSSLUG00000001901) ENSSLUG00000002011 ago2 (ENSSLUG00000002830) dlx5a (ENSSLUG00000007147) #22 dlx6a (ENSSLUG00000007158) #23 sem1 (ENSSLUG00000007162) #24 SLC25A13 (ENSSLUG00000007357) #25 DYNC1I1 (ENSSLUG00000011368) #28 pdk4 (ENSSLUG00000013373) #29 asb4 (ENSSLUG00000013528) #30 PPP1R9A (ENSSLUG00000013530) #34 sgce (ENSSLUG00000013563) #36 casd1 (ENSSLUG00000014624) #37 col1a2 (ENSSLUG00000014735) bet1 (ENSSLUG00000016859) zgc:85777 (ENSSLUG00000016870) tfpi2 (ENSSLUG00000016912) ENSSLUG00000016919 ENSSLUG00000016926 Cottioidei ANCESTRAL SPECIES 16 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Lumpfish MODERN SPECIES 2 ENSCLMG00005020085 ENSCLMG00005020080 ENSCLMG00005020074 tbc1d5 (ENSCLMG00005019337) ENSCLMG00005019330 ENSCLMG00005019314 ENSCLMG00005019312 GPNMB (ENSCLMG00005019275) igf2bp3 (ENSCLMG00005019273) tra2a (ENSCLMG00005019267) ccdc126 (ENSCLMG00005019266) fam221a (ENSCLMG00005019265) npy (ENSCLMG00005019264) ENSCLMG00005018744 ago2 (ENSCLMG00005014637) dlx5a (ENSCLMG00005014609) #22 dlx6a (ENSCLMG00005014606) #23 sem1 (ENSCLMG00005014602) #24 SLC25A13 (ENSCLMG00005014599) #25 DYNC1I1 (ENSCLMG00005014598) #28 pdk4 (ENSCLMG00005014596) #29 asb4 (ENSCLMG00005014594) #30 PPP1R9A (ENSCLMG00005014592) #34 sgce (ENSCLMG00005014591) #36 casd1 (ENSCLMG00005014589) #37 col1a2 (ENSCLMG00005014056) bet1 (ENSCLMG00005014041) zgc:85777 (ENSCLMG00005013965) ENSCLMG00005013963 tfpi2 (ENSCLMG00005013962) ENSCLMG00005013960 Stickleback MODERN SPECIES 9 ENSGACG00000007006 dazl (ENSGACG00000007001) ENSGACG00000006993 ENSGACG00000006988 tbc1d5 (ENSGACG00000006967) satb1a (ENSGACG00000006960) ENSGACG00000006954 GPNMB (ENSGACG00000006942) igf2bp3 (ENSGACG00000006894) tra2a (ENSGACG00000006878) ENSGACG00000006875 fam221a (ENSGACG00000006870) npy (ENSGACG00000006863) ENSGACG00000006849 ago2 (ENSGACG00000006796) dlx5a (ENSGACG00000006792) #22 dlx6a (ENSGACG00000006780) #23 sem1 (ENSGACG00000006767) #24 SLC25A13 (ENSGACG00000006755) #25 DYNC1I1 (ENSGACG00000006745) #28 pdk4 (ENSGACG00000006683) #29 asb4 (ENSGACG00000006677) #30 PPP1R9A (ENSGACG00000006652) #34 sgce (ENSGACG00000006592) #36 casd1 (ENSGACG00000006571) #37 col1a2 (ENSGACG00000006511) ENSGACG00000006508 ENSGACG00000006505 ENSGACG00000006495 sp4 (ENSGACG00000006481) ENSGACG00000006479 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Anabantaria ANCESTRAL SPECIES 16 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 ENSGT00390000003442 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 ENSGT00390000003442 Climbing perch MODERN SPECIES 2 dazl (ENSATEG00000001349) ENSATEG00000027399 ENSATEG00000001204 tbc1d5 (ENSATEG00000001109) satb1a (ENSATEG00000000974) ENSATEG00000000940 ENSATEG00000000830 GPNMB (ENSATEG00000000764) igf2bp3 (ENSATEG00000000681) tra2a (ENSATEG00000000671) ccdc126 (ENSATEG00000000665) fam221a (ENSATEG00000000634) npy (ENSATEG00000000620) ENSATEG00000000607 ago2 (ENSATEG00000000529) dlx5a (ENSATEG00000026247) #22 dlx6a (ENSATEG00000000495) #23 ENSATEG00000000483 ENSATEG00000000469 DYNC1I1 (ENSATEG00000000133) #28 pdk4 (ENSATEG00000000070) #29 asb4 (ENSATEG00000028921) #30 PPP1R9A (ENSATEG00000018826) #34 sgce (ENSATEG00000018781) #36 casd1 (ENSATEG00000018704) #37 col1a2 (ENSATEG00000018607) bet1 (ENSATEG00000018582) zgc:85777 (ENSATEG00000018545) gngt1 (ENSATEG00000018505) tfpi2 (ENSATEG00000018500) CALCR (ENSATEG00000018440) Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000012189 dazl (ENSBSLG00000012205) DNAH3 (ENSBSLG00000012261) ENSBSLG00000012668 tbc1d5 (ENSBSLG00000012727) satb1a (ENSBSLG00000014540) ENSBSLG00000014563 ENSBSLG00000014584 GPNMB (ENSBSLG00000014590) igf2bp3 (ENSBSLG00000014618) tra2a (ENSBSLG00000016152) ccdc126 (ENSBSLG00000016161) npy (ENSBSLG00000016166) ENSBSLG00000002388 ago2 (ENSBSLG00000002868) dlx5a (ENSBSLG00000003256) #22 dlx6a (ENSBSLG00000003257) #23 sem1 (ENSBSLG00000003587) #24 DYNC1I1 (ENSBSLG00000004114) #28 pdk4 (ENSBSLG00000004706) #29 asb4 (ENSBSLG00000004720) #30 PPP1R9A (ENSBSLG00000004725) #34 sgce (ENSBSLG00000005066) #36 casd1 (ENSBSLG00000005949) #37 col1a2 (ENSBSLG00000005986) bet1 (ENSBSLG00000007713) zgc:85777 (ENSBSLG00000007815) gngt1 (ENSBSLG00000007952) tfpi2 (ENSBSLG00000007958) CALCR (ENSBSLG00000007989) VPS50 (ENSBSLG00000008430) Zig-zag eel MODERN SPECIES 2 ENSMAMG00000028009 ENSMAMG00000024303 ENSMAMG00000008399 tbc1d5 (ENSMAMG00000008426) satb1a (ENSMAMG00000027316) ENSMAMG00000008473 ENSMAMG00000008498 GPNMB (ENSMAMG00000008513) igf2bp3 (ENSMAMG00000008545) tra2a (ENSMAMG00000027878) ccdc126 (ENSMAMG00000008592) fam221a (ENSMAMG00000008603) npy (ENSMAMG00000008616) ENSMAMG00000008621 ago2 (ENSMAMG00000008662) dlx5a (ENSMAMG00000008747) #22 dlx6a (ENSMAMG00000008761) #23 sem1 (ENSMAMG00000008788) #24 ENSMAMG00000025565 ENSMAMG00000008797 DYNC1I1 (ENSMAMG00000008817) #28 pdk4 (ENSMAMG00000008894) #29 asb4 (ENSMAMG00000008961) #30 PPP1R9A (ENSMAMG00000009004) #34 sgce (ENSMAMG00000009047) #36 casd1 (ENSMAMG00000009075) #37 col1a2 (ENSMAMG00000009132) bet1 (ENSMAMG00000009263) zgc:85777 (ENSMAMG00000009237) gngt1 (ENSMAMG00000025870) tfpi2 (ENSMAMG00000009282) Carangaria ANCESTRAL SPECIES 14 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Seriola ANCESTRAL SPECIES 12 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Greater amberjack MODERN SPECIES 48 ENSSDUG00000005250 ENSSDUG00000005261 ENSSDUG00000005269 tbc1d5 (ENSSDUG00000005303) satb1a (ENSSDUG00000005436) ENSSDUG00000005464 ENSSDUG00000005485 GPNMB (ENSSDUG00000005497) igf2bp3 (ENSSDUG00000005535) tra2a (ENSSDUG00000005610) ccdc126 (ENSSDUG00000005634) fam221a (ENSSDUG00000005642) npy (ENSSDUG00000005657) ENSSDUG00000005675 ago2 (ENSSDUG00000005726) dlx5a (ENSSDUG00000005778) #22 dlx6a (ENSSDUG00000005796) #23 sem1 (ENSSDUG00000005851) #24 SLC25A13 (ENSSDUG00000005870) #25 DYNC1I1 (ENSSDUG00000005935) #28 pdk4 (ENSSDUG00000005981) #29 ENSSDUG00000006026 #30 asb4 (ENSSDUG00000006034) #30 PPP1R9A (ENSSDUG00000006052) #34 sgce (ENSSDUG00000006087) #36 casd1 (ENSSDUG00000006140) #37 col1a2 (ENSSDUG00000006239) bet1 (ENSSDUG00000006388) zgc:85777 (ENSSDUG00000006406) gngt1 (ENSSDUG00000006460) tfpi2 (ENSSDUG00000006475) Yellowtail amberjack MODERN SPECIES 3132 tbc1d5 (ENSSLDG00000025571) satb1a (ENSSLDG00000025572) ENSSLDG00000025573 ENSSLDG00000025574 GPNMB (ENSSLDG00000025575) igf2bp3 (ENSSLDG00000025576) tra2a (ENSSLDG00000025577) ccdc126 (ENSSLDG00000025578) fam221a (ENSSLDG00000025579) npy (ENSSLDG00000025580) ENSSLDG00000025581 ago2 (ENSSLDG00000025582) dlx5a (ENSSLDG00000025583) #22 dlx6a (ENSSLDG00000025584) #23 sem1 (ENSSLDG00000025585) #24 SLC25A13 (ENSSLDG00000025586) #25 Barramundi perch MODERN SPECIES 3 ENSLCAG00010016925 tbc1d5 (ENSLCAG00010016938) satb1a (ENSLCAG00010017040) ENSLCAG00010017042 ENSLCAG00010017049 ENSLCAG00010017055 GPNMB (ENSLCAG00010017059) igf2bp3 (ENSLCAG00010017069) tra2a (ENSLCAG00010017089) ccdc126 (ENSLCAG00010017095) ENSLCAG00010017096 fam221a (ENSLCAG00010017098) npy (ENSLCAG00010017108) ENSLCAG00010017125 ago2 (ENSLCAG00010017287) dlx5a (ENSLCAG00010018273) #22 dlx6a (ENSLCAG00010018276) #23 sem1 (ENSLCAG00010018281) #24 SLC25A13 (ENSLCAG00010018296) #25 DYNC1I1 (ENSLCAG00010018381) #28 pdk4 (ENSLCAG00010018420) #29 asb4 (ENSLCAG00010018516) #30 PPP1R9A (ENSLCAG00010018532) #34 sgce (ENSLCAG00010018580) #36 casd1 (ENSLCAG00010018639) #37 col1a2 (ENSLCAG00010018745) bet1 (ENSLCAG00010019016) zgc:85777 (ENSLCAG00010019027) gngt1 (ENSLCAG00010019039) tfpi2 (ENSLCAG00010019046) CALCR (ENSLCAG00010019141) Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00530000063480.b ENSGT00940000154959 ENSGT00940000155660.a ENSGT00940000157121 ENSGT00390000008096.C.b ENSGT00940000156869 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000159344 #25 ENSGT00940000156032.`b.b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 Turbot MODERN SPECIES 14 dazl (ENSSMAG00000014694) ENSSMAG00000036740 ENSSMAG00000014560 tbc1d5 (ENSSMAG00000014510) satb1a (ENSSMAG00000014406) ENSSMAG00000014391 ENSSMAG00000014358 GPNMB (ENSSMAG00000014341) igf2bp3 (ENSSMAG00000014262) tra2a (ENSSMAG00000014242) ccdc126 (ENSSMAG00000014236) fam221a (ENSSMAG00000014220) npy (ENSSMAG00000014204) ENSSMAG00000014160 ago2 (ENSSMAG00000014089) dlx5a (ENSSMAG00000014079) #22 dlx6a (ENSSMAG00000014067) #23 sem1 (ENSSMAG00000014052) #24 SLC25A13 (ENSSMAG00000013855) #25 DYNC1I1 (ENSSMAG00000013803) #28 pdk4 (ENSSMAG00000013758) #29 asb4 (ENSSMAG00000013749) #30 PPP1R9A (ENSSMAG00000013688) #34 sgce (ENSSMAG00000013623) #36 casd1 (ENSSMAG00000013550) #37 col1a2 (ENSSMAG00000013511) bet1 (ENSSMAG00000013500) zgc:85777 (ENSSMAG00000013477) gngt1 (ENSSMAG00000013446) tfpi2 (ENSSMAG00000013402) CALCR (ENSSMAG00000013265) Tongue sole MODERN SPECIES 9 fndc5b (ENSCSEG00000011906) marcksl1b (ENSCSEG00000011910) khdrbs1b (ENSCSEG00000011915) tbc1d5 (ENSCSEG00000011935) ENSCSEG00000012000 ENSCSEG00000012049 ENSCSEG00000012069 GPNMB (ENSCSEG00000012082) igf2bp3 (ENSCSEG00000012106) tra2a (ENSCSEG00000012193) ccdc126 (ENSCSEG00000012212) fam221a (ENSCSEG00000012215) npy (ENSCSEG00000012223) ENSCSEG00000012240 ago2 (ENSCSEG00000012273) dlx5a (ENSCSEG00000012302) #22 dlx6a (ENSCSEG00000012309) #23 ENSCSEG00000012316 DYNC1I1 (ENSCSEG00000012327) #28 pdk4 (ENSCSEG00000012385) #29 asb4 (ENSCSEG00000012399) #30 casd1 (ENSCSEG00000012412) #37 sgce (ENSCSEG00000012445) #36 PPP1R9A (ENSCSEG00000012487) #34 ENSCSEG00000012525 ENSCSEG00000012570 fam133b (ENSCSEG00000012571) cdk6 (ENSCSEG00000012577) hepacam2 (ENSCSEG00000012589) VPS50 (ENSCSEG00000012607) CALCR (ENSCSEG00000012673) Tiger tail seahorse MODERN SPECIES 162 ENSHCOG00000006812 riok3 (ENSHCOG00000006794) tbc1d5 (ENSHCOG00000006746) ENSHCOG00000006588 ENSHCOG00000006559 ENSHCOG00000006413 GPNMB (ENSHCOG00000006385) igf2bp3 (ENSHCOG00000000578) tra2a (ENSHCOG00000006320) tra2a (ENSHCOG00000006314) ccdc126 (ENSHCOG00000006296) fam221a (ENSHCOG00000006289) npy (ENSHCOG00000006251) ENSHCOG00000006235 ago2 (ENSHCOG00000006200) dlx5a (ENSHCOG00000006157) #22 dlx6a (ENSHCOG00000006148) #23 sem1 (ENSHCOG00000006133) #24 DYNC1I1 (ENSHCOG00000006120) #28 ENSHCOG00000006102 #28 pdk4 (ENSHCOG00000006090) #29 asb4 (ENSHCOG00000006065) #30 PPP1R9A (ENSHCOG00000006042) #34 sgce (ENSHCOG00000000191) #36 Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005021835 ENSMMDG00005021832 dazl (ENSMMDG00005021827) ENSMMDG00005021823 ENSMMDG00005021821 oxnad1 (ENSMMDG00005021818) GALNT15 (ENSMMDG00005021813) GPNMB (ENSMMDG00005021807) igf2bp3 (ENSMMDG00005021694) tra2a (ENSMMDG00005021678) ccdc126 (ENSMMDG00005021677) fam221a (ENSMMDG00005021674) npy (ENSMMDG00005021673) ENSMMDG00005021670 ago2 (ENSMMDG00005018499) dlx5a (ENSMMDG00005018418) #22 dlx6a (ENSMMDG00005018416) #23 sem1 (ENSMMDG00005018414) #24 SLC25A13 (ENSMMDG00005015575) #25 DYNC1I1 (ENSMMDG00005015491) #28 pdk4 (ENSMMDG00005015486) #29 asb4 (ENSMMDG00005015480) #30 PPP1R9A (ENSMMDG00005015321) #34 sgce (ENSMMDG00005013596) #36 casd1 (ENSMMDG00005013566) #37 col1a2 (ENSMMDG00005013559) bet1 (ENSMMDG00005013556) zgc:85777 (ENSMMDG00005013540) gngt1 (ENSMMDG00005013537) tfpi2 (ENSMMDG00005013536) ENSMMDG00005013534 Cod MODERN SPECIES 14 satb1a (ENSGMOG00000011439) tbc1d5 (ENSGMOG00000011459) ENSGMOG00000011478 dazl (ENSGMOG00000011491) RFTN1 (ENSGMOG00000011560) oxnad1 (ENSGMOG00000011578) GALNT15 (ENSGMOG00000029953) GPNMB (ENSGMOG00000013797) igf2bp3 (ENSGMOG00000013764) tra2a (ENSGMOG00000013740) ccdc126 (ENSGMOG00000032506) fam221a (ENSGMOG00000013716) NPY (ENSGMOG00000013705) ENSGMOG00000013684 ago2 (ENSGMOG00000013651) dlx5a (ENSGMOG00000013639) #22 dlx6a (ENSGMOG00000013631) #23 sem1 (ENSGMOG00000026628) #24 SLC25A13 (ENSGMOG00000013604) #25 DYNC1I1 (ENSGMOG00000013584) #28 pdk4 (ENSGMOG00000013570) #29 asb4 (ENSGMOG00000013559) #30 ENSGMOG00000025406 #34 ENSGMOG00000035801 #34 sgce (ENSGMOG00000013519) #36 casd1 (ENSGMOG00000013501) #37 col1a2 (ENSGMOG00000013455) ENSGMOG00000025615 bet1 (ENSGMOG00000034885) zgc:85777 (ENSGMOG00000010136) ENSGMOG00000032903 Osteoglossiformes ANCESTRAL SPECIES 6 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000162035.a ENSGT00940000162035.b ENSGT00940000154725 ENSGT00940000157280 ENSGT00940000156079 ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00940000166127 ENSGT00940000155239 ENSGT00940000159188 #22 ENSGT00940000157683 #23 ENSGT00940000162732 #24 ENSGT00940000156032.`b.b #28 ENSGT01030000234646.B.a.a.a.b #29 ENSGT00940000158874 #30 ENSGT00940000155538 #34 ENSGT00390000005672.a.b #36 ENSGT00390000004037 #37 ENSGT00940000155639 ENSGT00940000163414 ENSGT00940000164410 ENSGT01100000263525.b.b ENSGT00940000159917 ENSGT00940000155380 ENSGT00390000003442 Asian bonytongue MODERN SPECIES 15 dtnbp1b (ENSSFOG00015005097) mylipa (ENSSFOG00015005105) gmpr (ENSSFOG00015005151) atxn1a (ENSSFOG00015005189) ENSSFOG00015005201 ENSSFOG00015032060 ST3GAL1 (ENSSFOG00015005278) ST3GAL1 (ENSSFOG00015027685) ST3GAL1 (ENSSFOG00015029280) KHDRBS3 (ENSSFOG00015013177) FAM135B (ENSSFOG00015013133) kcnk9 (ENSSFOG00015013057) TRAPPC9 (ENSSFOG00015012952) chrac1 (ENSSFOG00015012898) ago2 (ENSSFOG00015012817) dlx5a (ENSSFOG00015031149) #22 dlx6a (ENSSFOG00015012790) #23 sem1 (ENSSFOG00015028521) #24 DYNC1I1 (ENSSFOG00015012749) #28 pdk4 (ENSSFOG00015012711) #29 asb4 (ENSSFOG00015012693) #30 PPP1R9A (ENSSFOG00015012671) #34 sgce (ENSSFOG00015012609) #36 casd1 (ENSSFOG00015012558) #37 col1a2 (ENSSFOG00015012447) bet1 (ENSSFOG00015033210) zgc:85777 (ENSSFOG00015012381) gngt1 (ENSSFOG00015012354) tfpi2 (ENSSFOG00015012284) CALCR (ENSSFOG00015012033) VPS50 (ENSSFOG00015011864) P. kingsleyae MODERN SPECIES 13 ENSPKIG00000002515 ENSPKIG00000002499 ST3GAL1 (ENSPKIG00000002472) KHDRBS3 (ENSPKIG00000002433) FAM135B (ENSPKIG00000002305) ENSPKIG00000002276 ENSPKIG00000002237 ENSPKIG00000002221 ENSPKIG00000002208 ENSPKIG00000002191 kcnk9 (ENSPKIG00000002180) TRAPPC9 (ENSPKIG00000001998) ENSPKIG00000001888 chrac1 (ENSPKIG00000001875) ago2 (ENSPKIG00000001824) dlx5a (ENSPKIG00000001783) #22 dlx6a (ENSPKIG00000001768) #23 sem1 (ENSPKIG00000001755) #24 DYNC1I1 (ENSPKIG00000001721) #28 pdk4 (ENSPKIG00000001694) #29 asb4 (ENSPKIG00000001670) #30 PPP1R9A (ENSPKIG00000001567) #34 sgce (ENSPKIG00000001468) #36 casd1 (ENSPKIG00000001368) #37 col1a2 (ENSPKIG00000001264) bet1 (ENSPKIG00000001227) zgc:85777 (ENSPKIG00000001194) gngt1 (ENSPKIG00000001175) tfpi2 (ENSPKIG00000001156) CALCR (ENSPKIG00000001126) VPS50 (ENSPKIG00000001030) Spotted gar MODERN SPECIES 649 seraf (ENSLOCG00000011205) tmem106bb (ENSLOCG00000011187) thsd7aa (ENSLOCG00000011174) phf14 (ENSLOCG00000011164) nxph1 (ENSLOCG00000011148) ICA1 (ENSLOCG00000011135) #8 glcci1a (ENSLOCG00000011123) #9 rpa3 (ENSLOCG00000011113) #13 mios (ENSLOCG00000011101) #14 ENSLOCG00000011072 C1GALT1 (ENSLOCG00000011065) #17 asns (ENSLOCG00000011056) #18 tac1 (ENSLOCG00000011048) #19 ENSLOCG00000011030 sdhaf3 (ENSLOCG00000011022) #20 dlx5a (ENSLOCG00000011012) #22 dlx6a (ENSLOCG00000011008) #23 sem1 (ENSLOCG00000011004) #24 SLC25A13 (ENSLOCG00000010992) #25 dync1i1 (ENSLOCG00000010982) #28 pdk4 (ENSLOCG00000010966) #29 asb4 (ENSLOCG00000010959) #30 pon1 (ENSLOCG00000010932) #31 PPP1R9A (ENSLOCG00000010917) #34 sgce (ENSLOCG00000010901) #36 casd1 (ENSLOCG00000010891) #37 col1a2 (ENSLOCG00000010835) bet1 (ENSLOCG00000010821) zgc:85777 (ENSLOCG00000010811) gngt1 (ENSLOCG00000010805) tfpi2 (ENSLOCG00000010795) Reedfish MODERN SPECIES 4 SOSTDC1 (ENSECRG00000012329) crppa (ENSECRG00000012357) ENSECRG00000012394 ENSECRG00000012431 ICA1 (ENSECRG00000012482) #8 glcci1a (ENSECRG00000012524) #9 UMAD1 (ENSECRG00000012541) #12 rpa3 (ENSECRG00000012552) #13 mios (ENSECRG00000012584) #14 ENSECRG00000012623 asns (ENSECRG00000012637) #18 tac1 (ENSECRG00000012662) #19 ENSECRG00000012683 SDHAF3 (ENSECRG00000012713) #20 ENSECRG00000012725 dlx5a (ENSECRG00000012741) #22 dlx6a (ENSECRG00000012751) #23 sem1 (ENSECRG00000012771) #24 SLC25A13 (ENSECRG00000012797) #25 ENSECRG00000012854 dync1i1 (ENSECRG00000012902) #28 pdk4 (ENSECRG00000013091) #29 asb4 (ENSECRG00000013117) #30 ENSECRG00000013136 #31 ENSECRG00000013158 #31 PPP1R9A (ENSECRG00000013206) #34 sgce (ENSECRG00000013311) #36 casd1 (ENSECRG00000013375) #37 col1a2 (ENSECRG00000013418) bet1 (ENSECRG00000013481) zgc:85777 (ENSECRG00000013496) Elephant shark MODERN SPECIES 1614 dlx5a (ENSCMIG00000007422) #22 dlx6a (ENSCMIG00000007429) #23 ENSCMIG00000007436 #24 ENSCMIG00000007441 #25 dync1i1 (ENSCMIG00000007645) #28 sdhaf3 (ENSCMIG00000008241) #20 ENSCMIG00000008244 ENSCMIG00000008247 #19 asns (ENSCMIG00000008257) #18 C1GALT1 (ENSCMIG00000008283) #17 ENSCMIG00000008287 mios (ENSCMIG00000008293) #14 rpa3 (ENSCMIG00000008300) #13 ENSCMIG00000008301 #12 GLCCI1 (ENSCMIG00000008304) #9 ICA1 (ENSCMIG00000008309) #8 Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000159188.k #22 Lamprey MODERN SPECIES 2463 DLX5 (ENSPMAG00000003760) #22 Hagfish MODERN SPECIES 52 GALNT3 (ENSEBUG00000008080) ENSEBUG00000001908 ttc21b (ENSEBUG00000016430) ENSEBUG00000003684 ENSEBUG00000010619 wdr48b (ENSEBUG00000011328) ENSEBUG00000014392 ENSEBUG00000005414 ENSEBUG00000010830 ENSEBUG00000008493 ENSEBUG00000000993 ENSEBUG00000008451 DLX5 (ENSEBUG00000014206) #22 ENSEBUG00000001111 tra2b (ENSEBUG00000005001) L3HYPDH (ENSEBUG00000002057) ENSEBUG00000012909 ENSEBUG00000004087 ENSEBUG00000004272 Cyclostomata ANCESTRAL SPECIES 296 ENSGT00940000159188.l #22 ENSGT00940000157683 #23 Hagfish DUPLICATION Hagfish MODERN SPECIES 1203 ENSEBUG00000000934 #29 ENSEBUG00000005151 #22 dlx6a (ENSEBUG00000017031) #23 ENSEBUG00000011630 ENSEBUG00000015547 SLC25A13 (ENSEBUG00000008153) #25 ENSEBUG00000009002 ENSEBUG00000005784 ENSEBUG00000012673 ENSEBUG00000015552 ##9 ENSEBUG00000010996 ##8 ENSEBUG00000000430 ##8 ENSEBUG00000006461 ENSEBUG00000003800 cdk2 (ENSEBUG00000007048) Hagfish MODERN SPECIES 63 ENSEBUG00000002058 ENSEBUG00000010740 RUNDC1 (ENSEBUG00000007784) naca (ENSEBUG00000002572) AARSD1 (ENSEBUG00000010336) ENSEBUG00000008609 ENSEBUG00000010480 ENSEBUG00000002485 ENSEBUG00000001700 ENSEBUG00000004407 ENSEBUG00000004809 ENSEBUG00000001212 ENSEBUG00000012172 ENSEBUG00000013013 #29 ENSEBUG00000007015 ENSEBUG00000014727 #22 ENSEBUG00000010453 #23 ENSEBUG00000007428 ENSEBUG00000004057 ENSEBUG00000009290