Rodentia	ANCESTRAL SPECIES	22	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b #30	ENSGT00940000158961 #32	ENSGT00390000015396	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b #30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160
Lesser Egyptian jerboa	MODERN SPECIES	126															Ccdc122 (ENSJJAG00000021044) #21	Lacc1 (ENSJJAG00000021351) #22	ENSJJAG00000021469 #23	Serp2 (ENSJJAG00000021557) #24	ENSJJAG00000015078 #25	Nufip1 (ENSJJAG00000015369) #26	Gpalpp1 (ENSJJAG00000015544) #27	Gtf2f2 (ENSJJAG00000015891) #28	Kctd4 (ENSJJAG00000012151) #29	ENSJJAG00000016541 #30	ENSJJAG00000016940 #31	Slc25a30 (ENSJJAG00000017335) #32	Cog3 (ENSJJAG00000018271) #33	Cby2 (ENSJJAG00000019147) #34	Siah3 (ENSJJAG00000019440) #35	ENSJJAG00000019522 #36	Zc3h13 (ENSJJAG00000019971) #37
Muroidea	ANCESTRAL SPECIES	25	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b.a #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b.a #27	ENSGT00390000016051 #28	ENSGT00940000159552 #29	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Chinese hamster chok1gshd	MODERN SPECIES	3	Mtrf1 (ENSCGRG00001003065)	ENSCGRG00001008906	Naa16 (ENSCGRG00001023139)	Rgcc (ENSCGRG00001010708)	ENSCGRG00001011992	ENSCGRG00001017855	Vwa8 (ENSCGRG00001023461)	Dgkh (ENSCGRG00001012161)	Akap11 (ENSCGRG00001020906)	Tnfsf11 (ENSCGRG00001013327)	Fam216b (ENSCGRG00001000086)	Epsti1 (ENSCGRG00001009306)	Dnajc15 (ENSCGRG00001000292)	Enox1 (ENSCGRG00001014073)	Ccdc122 (ENSCGRG00001006861) #21	Lacc1 (ENSCGRG00001020034) #22	Serp2 (ENSCGRG00001003518) #24	Tsc22d1 (ENSCGRG00001001346)	Nufip1 (ENSCGRG00001012209) #26	Gpalpp1 (ENSCGRG00001020996) #27	Kctd4 (ENSCGRG00001001160) #29	Gtf2f2 (ENSCGRG00001015200) #28	Tpt1 (ENSCGRG00001019454) ##30	Slc25a30 (ENSCGRG00001009475) #32	Cog3 (ENSCGRG00001023420) #33	Cby2 (ENSCGRG00001019775) #34	Siah3 (ENSCGRG00001022985) #35	Zc3h13 (ENSCGRG00001014490) #37	Cpb2 (ENSCGRG00001000100)	Lcp1 (ENSCGRG00001021099)	Lrrc63 (ENSCGRG00001021365)
Golden Hamster	MODERN SPECIES	642	Elf1 (ENSMAUG00000012901)	Wbp4 (ENSMAUG00000018253)	Kbtbd6 (ENSMAUG00000000372)	Kbtbd7 (ENSMAUG00000004183)	Mtrf1 (ENSMAUG00000011661)	Rgcc (ENSMAUG00000020733)	Vwa8 (ENSMAUG00000020740)	Dgkh (ENSMAUG00000017457)	Akap11 (ENSMAUG00000016985)	Tnfsf11 (ENSMAUG00000001005)	Fam216b (ENSMAUG00000014549)	Epsti1 (ENSMAUG00000018985)	Dnajc15 (ENSMAUG00000009642)	Enox1 (ENSMAUG00000019233)	ENSMAUG00000013996 #21	Lacc1 (ENSMAUG00000018912) #22	Serp2 (ENSMAUG00000019897) #24	ENSMAUG00000014274 #25	Nufip1 (ENSMAUG00000021413) #26	Gpalpp1 (ENSMAUG00000021389) #27	Gtf2f2 (ENSMAUG00000018898) #28	Kctd4 (ENSMAUG00000005135) #29	Tpt1 (ENSMAUG00000014012) ##30	Slc25a30 (ENSMAUG00000012973) #32	Cog3 (ENSMAUG00000018785) #33	Cby2 (ENSMAUG00000021027) #34	Siah3 (ENSMAUG00000016684) #35	ENSMAUG00000005243	Cpb2 (ENSMAUG00000011270)	ENSMAUG00000017813	Lrrc63 (ENSMAUG00000017212)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000157039.b	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00390000003758 #26	ENSGT00390000012569.b.a #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Prairie vole	MODERN SPECIES	4	Tgds (ENSMOCG00000021583)	Dct (ENSMOCG00000019333)	Gpc6 (ENSMOCG00000022265)	Gpc5 (ENSMOCG00000011002)	ENSMOCG00000003746	Slitrk5 (ENSMOCG00000019120)	ENSMOCG00000006881	ENSMOCG00000017964	Slitrk6 (ENSMOCG00000013923)	ENSMOCG00000005944	ENSMOCG00000007797	ENSMOCG00000017655	Slitrk1 (ENSMOCG00000008123)	ENSMOCG00000014539	Enox1 (ENSMOCG00000012930)	Lacc1 (ENSMOCG00000011112) #22	Serp2 (ENSMOCG00000022234) #24	ENSMOCG00000018072 #25	Nufip1 (ENSMOCG00000008223) #26	ENSMOCG00000009812 #27	Kctd4 (ENSMOCG00000008795) #29	Gtf2f2 (ENSMOCG00000020515) #28	ENSMOCG00000016698 #30	Slc25a30 (ENSMOCG00000010410) #32	Cog3 (ENSMOCG00000002598) #33	Cby2 (ENSMOCG00000014959) #34	Siah3 (ENSMOCG00000009347) #35	ENSMOCG00000001346	Cpb2 (ENSMOCG00000006393)	Lcp1 (ENSMOCG00000010746)	Lrrc63 (ENSMOCG00000018528)
Northern American deer mouse	MODERN SPECIES	22	Elf1 (ENSPEMG00000021551)	Wbp4 (ENSPEMG00000021764)	Kbtbd7 (ENSPEMG00000015250)	Mtrf1 (ENSPEMG00000020982)	Naa16 (ENSPEMG00000021265)	Rgcc (ENSPEMG00000013380)	Vwa8 (ENSPEMG00000016456)	Dgkh (ENSPEMG00000020442)	Akap11 (ENSPEMG00000017768)	Tnfsf11 (ENSPEMG00000026330)	Fam216b (ENSPEMG00000010168)	Epsti1 (ENSPEMG00000012785)	Dnajc15 (ENSPEMG00000017585)	Enox1 (ENSPEMG00000009188)	Ccdc122 (ENSPEMG00000013832) #21	Lacc1 (ENSPEMG00000011166) #22	ENSPEMG00000024909	Tsc22d1 (ENSPEMG00000022760)	ENSPEMG00000012421	Nufip1 (ENSPEMG00000023639) #26	Gpalpp1 (ENSPEMG00000000218) #27	Kctd4 (ENSPEMG00000006357) #29	Gtf2f2 (ENSPEMG00000027889) #28	Tpt1 (ENSPEMG00000001813) ##30	Slc25a30 (ENSPEMG00000022181) #32	Cog3 (ENSPEMG00000020827) #33	Cby2 (ENSPEMG00000020758) #34	Siah3 (ENSPEMG00000028254) #35	Zc3h13 (ENSPEMG00000021979) #37	Cpb2 (ENSPEMG00000021086)	Lcp1 (ENSPEMG00000009810)
Murinae	ANCESTRAL SPECIES	16	ENSGT00390000013956	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b.c.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus	ANCESTRAL SPECIES	8	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b.c.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00940000157896.f	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b.c.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00940000157896.f	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b.c.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00940000157896.f	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00860000135855	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.a.b.b.c.b.c.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00520000061084	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020436	Mtrf1 (MGP_SPRETEiJ_G0020435)	Naa16 (MGP_SPRETEiJ_G0020434)	Rgcc (MGP_SPRETEiJ_G0020433)	Zfp957 (MGP_SPRETEiJ_G0020432)	Vwa8 (MGP_SPRETEiJ_G0020431)	Dgkh (MGP_SPRETEiJ_G0020430)	Akap11 (MGP_SPRETEiJ_G0020429)	Tnfsf11 (MGP_SPRETEiJ_G0020428)	Fam216b (MGP_SPRETEiJ_G0020427)	Epsti1 (MGP_SPRETEiJ_G0020426)	Dnajc15 (MGP_SPRETEiJ_G0020425)	MGP_SPRETEiJ_G0020424	Enox1 (MGP_SPRETEiJ_G0020423)	Ccdc122 (MGP_SPRETEiJ_G0020422) #21	MGP_SPRETEiJ_G0020421 #22	Serp2 (MGP_SPRETEiJ_G0020420) #24	Tsc22d1 (MGP_SPRETEiJ_G0020419)	Nufip1 (MGP_SPRETEiJ_G0020418) #26	Gpalpp1 (MGP_SPRETEiJ_G0020417) #27	Kctd4 (MGP_SPRETEiJ_G0020416) #29	Gtf2f2 (MGP_SPRETEiJ_G0020415) #28	Tpt1 (MGP_SPRETEiJ_G0020414) ##30	Slc25a30 (MGP_SPRETEiJ_G0020413) #32	Cog3 (MGP_SPRETEiJ_G0020412) #33	MGP_SPRETEiJ_G0020411	Cby2 (MGP_SPRETEiJ_G0020410) #34	Siah3 (MGP_SPRETEiJ_G0020409) #35	MGP_SPRETEiJ_G0020408	Zc3h13 (MGP_SPRETEiJ_G0020407) #37	Cpb2 (MGP_SPRETEiJ_G0020406)
Steppe mouse	MODERN SPECIES	3340											ENSMSIG00000022018	ENSMSIG00000022012	ENSMSIG00000021990	Enox1 (ENSMSIG00000021850)	Ccdc122 (ENSMSIG00000021826) #21	Lacc1 (ENSMSIG00000021816) #22	ENSMSIG00000021792 #24	Tsc22d1 (ENSMSIG00000021724)	Nufip1 (ENSMSIG00000021714) #26	Gpalpp1 (ENSMSIG00000021703) #27	Kctd4 (ENSMSIG00000021688) #29	ENSMSIG00000021679	Gtf2f2 (ENSMSIG00000021660) #28	ENSMSIG00000021620 ##30	ENSMSIG00000021594 #32	Cog3 (ENSMSIG00000021489) #33	ENSMSIG00000021463	Cby2 (ENSMSIG00000021441) #34	Siah3 (ENSMSIG00000021424) #35	Zc3h13 (ENSMSIG00000021317) #37	Cpb2 (ENSMSIG00000021306)
Mouse	MODERN SPECIES	5	Kbtbd6 (ENSMUSG00000075502)	Kbtbd7 (ENSMUSG00000043881)	Mtrf1 (ENSMUSG00000022022)	Naa16 (ENSMUSG00000022020)	Rgcc (ENSMUSG00000022018)	Zfp957 (ENSMUSG00000071262)	Vwa8 (ENSMUSG00000058997)	Dgkh (ENSMUSG00000034731)	Akap11 (ENSMUSG00000022016)	Tnfsf11 (ENSMUSG00000022015)	Fam216b (ENSMUSG00000045655)	Epsti1 (ENSMUSG00000022014)	Dnajc15 (ENSMUSG00000022013)	Enox1 (ENSMUSG00000022012)	Ccdc122 (ENSMUSG00000034795) #21	Lacc1 (ENSMUSG00000044350) #22	Serp2 (ENSMUSG00000052584) #24	Tsc22d1 (ENSMUSG00000022010)	Nufip1 (ENSMUSG00000022009) #26	Gpalpp1 (ENSMUSG00000022008) #27	Kctd4 (ENSMUSG00000046523) #29	Gtf2f2 (ENSMUSG00000067995) #28	Tpt1 (ENSMUSG00000060126) ##30	Slc25a30 (ENSMUSG00000022003) #32	Cog3 (ENSMUSG00000034893) #33	Erich6b (ENSMUSG00000022002)	Cby2 (ENSMUSG00000034913) #34	Siah3 (ENSMUSG00000091722) #35	Zc3h13 (ENSMUSG00000022000) #37	Cpb2 (ENSMUSG00000021999)	Lcp1 (ENSMUSG00000021998)
Ryukyu mouse	MODERN SPECIES	5	Kbtbd7 (MGP_CAROLIEiJ_G0019540)	Mtrf1 (MGP_CAROLIEiJ_G0019539)	Naa16 (MGP_CAROLIEiJ_G0019538)	Rgcc (MGP_CAROLIEiJ_G0019537)	MGP_CAROLIEiJ_G0019536	Vwa8 (MGP_CAROLIEiJ_G0019535)	Dgkh (MGP_CAROLIEiJ_G0019534)	Akap11 (MGP_CAROLIEiJ_G0019533)	Tnfsf11 (MGP_CAROLIEiJ_G0019532)	Fam216b (MGP_CAROLIEiJ_G0019531)	Epsti1 (MGP_CAROLIEiJ_G0019530)	Dnajc15 (MGP_CAROLIEiJ_G0019529)	MGP_CAROLIEiJ_G0019528	Enox1 (MGP_CAROLIEiJ_G0019527)	Ccdc122 (MGP_CAROLIEiJ_G0019526) #21	MGP_CAROLIEiJ_G0019525 #22	Serp2 (MGP_CAROLIEiJ_G0019524) #24	Tsc22d1 (MGP_CAROLIEiJ_G0019523)	Nufip1 (MGP_CAROLIEiJ_G0019522) #26	Gpalpp1 (MGP_CAROLIEiJ_G0019521) #27	Kctd4 (MGP_CAROLIEiJ_G0019520) #29	Gtf2f2 (MGP_CAROLIEiJ_G0019519) #28	Tpt1 (MGP_CAROLIEiJ_G0019518) ##30	Slc25a30 (MGP_CAROLIEiJ_G0019517) #32	Cog3 (MGP_CAROLIEiJ_G0019516) #33	MGP_CAROLIEiJ_G0019515	Cby2 (MGP_CAROLIEiJ_G0019514) #34	Siah3 (MGP_CAROLIEiJ_G0019513) #35	Zc3h13 (MGP_CAROLIEiJ_G0019512) #37	Cpb2 (MGP_CAROLIEiJ_G0019511)	Lcp1 (MGP_CAROLIEiJ_G0019510)
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030559	Kbtbd7 (MGP_PahariEiJ_G0030558)	Mtrf1 (MGP_PahariEiJ_G0030557)	Naa16 (MGP_PahariEiJ_G0030556)	Rgcc (MGP_PahariEiJ_G0030555)	Vwa8 (MGP_PahariEiJ_G0030553)	Dgkh (MGP_PahariEiJ_G0030552)	Akap11 (MGP_PahariEiJ_G0030551)	Tnfsf11 (MGP_PahariEiJ_G0030550)	Fam216b (MGP_PahariEiJ_G0030549)	Epsti1 (MGP_PahariEiJ_G0030548)	Dnajc15 (MGP_PahariEiJ_G0030547)	MGP_PahariEiJ_G0030546	Enox1 (MGP_PahariEiJ_G0030545)	Ccdc122 (MGP_PahariEiJ_G0030544) #21	Lacc1 (MGP_PahariEiJ_G0030543) #22	Serp2 (MGP_PahariEiJ_G0030542) #24	Tsc22d1 (MGP_PahariEiJ_G0030541)	Nufip1 (MGP_PahariEiJ_G0030540) #26	Gpalpp1 (MGP_PahariEiJ_G0030539) #27	Kctd4 (MGP_PahariEiJ_G0030538) #29	Gtf2f2 (MGP_PahariEiJ_G0030537) #28	Tpt1 (MGP_PahariEiJ_G0030536) ##30	Slc25a30 (MGP_PahariEiJ_G0030535) #32	Cog3 (MGP_PahariEiJ_G0030534) #33	MGP_PahariEiJ_G0030533	Cby2 (MGP_PahariEiJ_G0030532) #34	Siah3 (MGP_PahariEiJ_G0030531) #35	Zc3h13 (MGP_PahariEiJ_G0030530) #37	Cpb2 (MGP_PahariEiJ_G0030529)	Lcp1 (MGP_PahariEiJ_G0030528)
Rat	MODERN SPECIES	6	Kbtbd7 (ENSRNOG00000064764)	Mtrf1 (ENSRNOG00000047106)	Naa16 (ENSRNOG00000045863)	ENSRNOG00000067430	Rgcc (ENSRNOG00000042960)	ENSRNOG00000064147	Vwa8 (ENSRNOG00000053145)	Dgkh (ENSRNOG00000010065)	Akap11 (ENSRNOG00000009987)	Tnfsf11 (ENSRNOG00000071047)	Fam216b (ENSRNOG00000021943)	Epsti1 (ENSRNOG00000009471)	Dnajc15 (ENSRNOG00000009063)	Enox1 (ENSRNOG00000047817)	Ccdc122 (ENSRNOG00000042404) #21	Lacc1 (ENSRNOG00000022094) #22	Serp2 (ENSRNOG00000038228) #24	Tsc22d1 (ENSRNOG00000001030)	ENSRNOG00000070802	Nufip1 (ENSRNOG00000001033) #26	Gpalpp1 (ENSRNOG00000001037) #27	Kctd4 (ENSRNOG00000050996) #29	Gtf2f2 (ENSRNOG00000029316) #28	Tpt1 (ENSRNOG00000001049) ##30	Slc25a30 (ENSRNOG00000001052) #32	Cog3 (ENSRNOG00000000155) #33	Cby2 (ENSRNOG00000047413) #34	Siah3 (ENSRNOG00000043061) #35	Zc3h13 (ENSRNOG00000011237) #37	Cpb2 (ENSRNOG00000010935)	Lcp1 (ENSRNOG00000010319)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1698	Kbtbd7 (ENSNGAG00000011545)	Mtrf1 (ENSNGAG00000014460)	Naa16 (ENSNGAG00000004140)	Rgcc (ENSNGAG00000022423)	Vwa8 (ENSNGAG00000010244)	Dgkh (ENSNGAG00000024075)	Akap11 (ENSNGAG00000010398)	Tnfsf11 (ENSNGAG00000023783)	ENSNGAG00000009242	Fam216b (ENSNGAG00000008030)	Epsti1 (ENSNGAG00000020070)	Dnajc15 (ENSNGAG00000012778)	Enox1 (ENSNGAG00000024175)	ENSNGAG00000010951	Ccdc122 (ENSNGAG00000022365) #21	Lacc1 (ENSNGAG00000023659) #22
Kangaroo rat	MODERN SPECIES	320	Sugt1 (ENSDORG00000013064)	Elf1 (ENSDORG00000026436)	Wbp4 (ENSDORG00000007755)	Kbtbd7 (ENSDORG00000023750)	Mtrf1 (ENSDORG00000016429)	Naa16 (ENSDORG00000012584)	Rgcc (ENSDORG00000015195)	Vwa8 (ENSDORG00000011298)	Dgkh (ENSDORG00000005024)	Tnfsf11 (ENSDORG00000026136)	Fam216b (ENSDORG00000007655)	Epsti1 (ENSDORG00000004992)	Dnajc15 (ENSDORG00000013550)	Enox1 (ENSDORG00000001328)	Ccdc122 (ENSDORG00000015236) #21	Lacc1 (ENSDORG00000015240) #22	Serp2 (ENSDORG00000028153) #24	ENSDORG00000025839 #25	Nufip1 (ENSDORG00000003359) #26	Gpalpp1 (ENSDORG00000003360) #27	Gtf2f2 (ENSDORG00000002860) #28	Kctd4 (ENSDORG00000003773) #29	Tpt1 (ENSDORG00000008518) #30	Slc25a30 (ENSDORG00000004865) #32	Cog3 (ENSDORG00000002499) #33	Cby2 (ENSDORG00000026204) #34	Siah3 (ENSDORG00000024143) #35	Zc3h13 (ENSDORG00000000600) #37	Cpb2 (ENSDORG00000000602)	Lcp1 (ENSDORG00000000603)	Rubcnl (ENSDORG00000014634)
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00940000157039.b	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000166021	ENSGT01060000249039	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.b.f ##30	ENSGT00390000006051.a.b.a.a ##30	ENSGT00940000158961 #32	ENSGT00390000015396	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00940000157039.b	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000166021	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.b.f.a ##30	ENSGT00940000158961 #32	ENSGT00390000015396	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00940000157039.b	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT01060000249039	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00390000016051 #28	ENSGT00940000159552 #29	ENSGT00390000006051.a.b.a.a.p ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Hystricomorpha_b	ANCESTRAL SPECIES	44										ENSGT01070000253816.a.a.b	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT01060000249039	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051 #28	ENSGT00390000006051.b.f.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Long-tailed chinchilla	MODERN SPECIES	225											TNFSF11 (ENSCLAG00000000281)	EPSTI1 (ENSCLAG00000000332)	DNAJC15 (ENSCLAG00000000305)	ENOX1 (ENSCLAG00000000372)	CCDC122 (ENSCLAG00000001565) #21	LACC1 (ENSCLAG00000001645) #22	ENSCLAG00000001695	TSC22D1 (ENSCLAG00000001734)	NUFIP1 (ENSCLAG00000000114) #26	ENSCLAG00000000164 #27	ENSCLAG00000000205 #28	KCTD4 (ENSCLAG00000000309) #29	SLC25A30 (ENSCLAG00000000339) #32	COG3 (ENSCLAG00000000745) #33	CBY2 (ENSCLAG00000000430) #34	SIAH3 (ENSCLAG00000000493) #35	ZC3H13 (ENSCLAG00000000610) #37	CPB2 (ENSCLAG00000000655)	ENSCLAG00000000776	ENSCLAG00000000122	LCP1 (ENSCLAG00000000191)
Degu	MODERN SPECIES	163	LLGL1 (ENSODEG00000006178)	FLII (ENSODEG00000007385)	ENSODEG00000005602	ENSODEG00000005229	SMCR8 (ENSODEG00000007558)	SHMT1 (ENSODEG00000007205)	ENSODEG00000006233	ENSODEG00000006660	ENSODEG00000006486	TNFSF11 (ENSODEG00000006356)	FAM216B (ENSODEG00000005625)	ENSODEG00000006181	ENSODEG00000019241	ENOX1 (ENSODEG00000005302)	CCDC122 (ENSODEG00000005141) #21	LACC1 (ENSODEG00000005776) #22	ENSODEG00000005627	SERP2 (ENSODEG00000007267) #24	ENSODEG00000006384 #25	ENSODEG00000005705	NUFIP1 (ENSODEG00000006473) #26	ENSODEG00000006393	ENSODEG00000005907 #27	ENSODEG00000006647	KCTD4 (ENSODEG00000019362) #29	GTF2F2 (ENSODEG00000006595) #28	ENSODEG00000005658 ##30	SLC25A30 (ENSODEG00000005522) #32	COG3 (ENSODEG00000006373) #33	CBY2 (ENSODEG00000007190) #34	SIAH3 (ENSODEG00000006861) #35
Guinea pig	MODERN SPECIES	6	CNMD (ENSCPOG00000038512)	SUGT1 (ENSCPOG00000003374)	ELF1 (ENSCPOG00000004342)	WBP4 (ENSCPOG00000013860)	KBTBD7 (ENSCPOG00000008898)	MTRF1 (ENSCPOG00000005264)	RGCC (ENSCPOG00000035101)	VWA8 (ENSCPOG00000006076)	DGKH (ENSCPOG00000006087)	AKAP11 (ENSCPOG00000006094)	TNFSF11 (ENSCPOG00000031600)	ENSCPOG00000040476	DNAJC15 (ENSCPOG00000003485)	ENOX1 (ENSCPOG00000020461)	CCDC122 (ENSCPOG00000003514) #21	LACC1 (ENSCPOG00000011253) #22	ENSCPOG00000031530	TSC22D1 (ENSCPOG00000000560)	NUFIP1 (ENSCPOG00000005828) #26	ENSCPOG00000026022 #27	GTF2F2 (ENSCPOG00000009342) #28	KCTD4 (ENSCPOG00000009346) #29	ENSCPOG00000009278 ##30	SLC25A30 (ENSCPOG00000031582) #32	COG3 (ENSCPOG00000009924) #33	CBY2 (ENSCPOG00000036575) #34	SIAH3 (ENSCPOG00000033748) #35	ZC3H13 (ENSCPOG00000000646) #37	CPB2 (ENSCPOG00000000649)	LCP1 (ENSCPOG00000001937)	RUBCNL (ENSCPOG00000008458)
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000035169	RGCC (ENSHGLG00000006185)	VWA8 (ENSHGLG00000007298)	DGKH (ENSHGLG00000018938)	ENSHGLG00000007054	ENSHGLG00000046376	ENSHGLG00000036055	ENSHGLG00000043143	FAM216B (ENSHGLG00000004363)	ENSHGLG00000034519	ENSHGLG00000007301	DNAJC15 (ENSHGLG00000005490)	ENSHGLG00000037702	ENOX1 (ENSHGLG00000013344)	CCDC122 (ENSHGLG00000016595) #21	LACC1 (ENSHGLG00000019316) #22	ENSHGLG00000045625	SERP2 (ENSHGLG00000018907) #24	ENSHGLG00000048136 #25	ENSHGLG00000038690	TSC22D1 (ENSHGLG00000009007)	NUFIP1 (ENSHGLG00000046882) #26	ENSHGLG00000041102 #27	KCTD4 (ENSHGLG00000008886) #29	ENSHGLG00000007884 #28	ENSHGLG00000005278 ##30	ENSHGLG00000003878	ENSHGLG00000003289 #32	ENSHGLG00000043699	ENSHGLG00000002801 #33	CBY2 (ENSHGLG00000009737) #34
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000154415.`b.f	ENSGT00940000154512.a	ENSGT00390000013820	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051.u.b #28	ENSGT00390000006051.b.f ##30	ENSGT00390000006051.a.b.a.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Marmotini	ANCESTRAL SPECIES	29	ENSGT00950000186331	ENSGT00940000157039.b	ENSGT00940000155157.l	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25	ENSGT00940000159144.B	ENSGT00390000003758 #26	ENSGT00390000012569.b #27	ENSGT00940000159552 #29	ENSGT00390000016051.u.b #28	ENSGT00390000006051.b.f ##30	ENSGT00390000006051.a.b.a.a ##30	ENSGT00940000158961 #32	ENSGT00390000015682 #33	ENSGT00940000153137.a.b.b.a #34	ENSGT00940000161772 #35	ENSGT00730000111163 #37	ENSGT00940000159160
Marmotini_b	ANCESTRAL SPECIES	310															ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #24	ENSGT00940000163647 #25
Arctic ground squirrel	MODERN SPECIES	689																ENSUPAG00010003997 #22	SERP2 (ENSUPAG00010004099) #24	ENSUPAG00010004116 #25
Squirrel	MODERN SPECIES	391														ENSSTOG00000001840 #21	ENSSTOG00000034353	LACC1 (ENSSTOG00000011506) #22	ENSSTOG00000031098 #21	ENSSTOG00000016149	TSC22D1 (ENSSTOG00000026378)	NUFIP1 (ENSSTOG00000009128) #26	ENSSTOG00000009146 #27	ENSSTOG00000030346	GTF2F2 (ENSSTOG00000006891) #28	KCTD4 (ENSSTOG00000006919) #29	TPT1 (ENSSTOG00000006931) ##30
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000000196	WBP4 (ENSMMMG00000000179)	KBTBD7 (ENSMMMG00000000126)	MTRF1 (ENSMMMG00000000091)	NAA16 (ENSMMMG00000000060)	RGCC (ENSMMMG00000023619)	VWA8 (ENSMMMG00000023535)	DGKH (ENSMMMG00000023481)	AKAP11 (ENSMMMG00000023475)	TNFSF11 (ENSMMMG00000023474)	ENSMMMG00000023473	EPSTI1 (ENSMMMG00000023471)	ENOX1 (ENSMMMG00000023468)	ENSMMMG00000023467	CCDC122 (ENSMMMG00000023465) #21	LACC1 (ENSMMMG00000023463) #22	TSC22D1 (ENSMMMG00000023448)	NUFIP1 (ENSMMMG00000023439) #26	ENSMMMG00000023437 #27	ENSMMMG00000023435	KCTD4 (ENSMMMG00000023434) #29	ENSMMMG00000023432 #28	ENSMMMG00000023427 ##30	SLC25A30 (ENSMMMG00000023425) #32	COG3 (ENSMMMG00000023415) #33	CBY2 (ENSMMMG00000023405) #34	SIAH3 (ENSMMMG00000023403) #35	ZC3H13 (ENSMMMG00000023343) #37	CPB2 (ENSMMMG00000023337)	LCP1 (ENSMMMG00000023327)	LRRC63 (ENSMMMG00000023317)
Eurasian red squirrel	MODERN SPECIES	13	WBP4 (ENSSVLG00005004520)	ENSSVLG00005004557	ENSSVLG00005004565	NAA16 (ENSSVLG00005004585)	RGCC (ENSSVLG00005004637)	VWA8 (ENSSVLG00005004690)	DGKH (ENSSVLG00005000391)	AKAP11 (ENSSVLG00005000468)	TNFSF11 (ENSSVLG00005000540)	ENSSVLG00005000585	FAM216B (ENSSVLG00005000610)	EPSTI1 (ENSSVLG00005000671)	DNAJC15 (ENSSVLG00005000749)	ENOX1 (ENSSVLG00005000776)	CCDC122 (ENSSVLG00005000800) #21	LACC1 (ENSSVLG00005000824) #22	SERP2 (ENSSVLG00005000867) #24	TSC22D1 (ENSSVLG00005000900)	NUFIP1 (ENSSVLG00005000955) #26	ENSSVLG00005000987 #27	ENSSVLG00005001012	ENSSVLG00005001028	ENSSVLG00005001046 #28	KCTD4 (ENSSVLG00005001062) #29	ENSSVLG00005001090 ##30	ENSSVLG00005001144	ENSSVLG00005001160	SLC25A30 (ENSSVLG00005001187) #32	ENSSVLG00005001222 #33	CBY2 (ENSSVLG00005001296) #34	SIAH3 (ENSSVLG00005001312) #35