Sarcopterygii	ANCESTRAL SPECIES	11	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00940000166281	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000165996	ENSGT01030000235083	ENSGT00940000159160
Tetrapoda	ANCESTRAL SPECIES		ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000165996	ENSGT01030000235083	ENSGT00940000161772 #37	ENSGT00730000111163
Amniota	ANCESTRAL SPECIES		ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996
Mammalia	ANCESTRAL SPECIES		ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996	ENSGT01030000235083
Theria	ANCESTRAL SPECIES	1	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996
Eutheria	ANCESTRAL SPECIES	17	ENSGT00940000155175.B	ENSGT00940000155175.C	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Glires	ANCESTRAL SPECIES	22	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Rodentia	ANCESTRAL SPECIES	22	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT01060000249039	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b.f ##31	ENSGT00390000006051.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154415.`b.f #16	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.u.b #29	ENSGT00390000006051.b.f ##31	ENSGT00390000006051.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Eurasian red squirrel	MODERN SPECIES	13	WBP4 (ENSSVLG00005004520) #7	ENSSVLG00005004557 #8	ENSSVLG00005004565 #9	NAA16 (ENSSVLG00005004585) #10	RGCC (ENSSVLG00005004637) #11	VWA8 (ENSSVLG00005004690) #12	DGKH (ENSSVLG00005000391) #13	AKAP11 (ENSSVLG00005000468) #14	TNFSF11 (ENSSVLG00005000540) #15	ENSSVLG00005000585 #16	FAM216B (ENSSVLG00005000610) #17	EPSTI1 (ENSSVLG00005000671) #18	DNAJC15 (ENSSVLG00005000749) #19	ENOX1 (ENSSVLG00005000776) #20	CCDC122 (ENSSVLG00005000800) #21	LACC1 (ENSSVLG00005000824) #22	SERP2 (ENSSVLG00005000867) #23	TSC22D1 (ENSSVLG00005000900) #24	NUFIP1 (ENSSVLG00005000955) #25	ENSSVLG00005000987 #26	ENSSVLG00005001012 #27	ENSSVLG00005001028 #28	ENSSVLG00005001046 #29	KCTD4 (ENSSVLG00005001062) #30	ENSSVLG00005001090 #31	ENSSVLG00005001144 #32	ENSSVLG00005001160 #33	SLC25A30 (ENSSVLG00005001187) #34	ENSSVLG00005001222 #35	CBY2 (ENSSVLG00005001296) #36	SIAH3 (ENSSVLG00005001312) #37
Marmotini	ANCESTRAL SPECIES	29	ENSGT00950000186331	ENSGT00940000157039.b	ENSGT00940000155157.l	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.u.b #29	ENSGT00390000006051.b.f ##31	ENSGT00390000006051.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Marmotini_b	ANCESTRAL SPECIES	310															ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647
Arctic ground squirrel	MODERN SPECIES	689																ENSUPAG00010003997 #22	SERP2 (ENSUPAG00010004099) #23	ENSUPAG00010004116
Squirrel	MODERN SPECIES	391														ENSSTOG00000001840 #21	ENSSTOG00000034353	LACC1 (ENSSTOG00000011506) #22	ENSSTOG00000031098 #21	ENSSTOG00000016149	TSC22D1 (ENSSTOG00000026378) #24	NUFIP1 (ENSSTOG00000009128) #25	ENSSTOG00000009146 #26	ENSSTOG00000030346	GTF2F2 (ENSSTOG00000006891) #29	KCTD4 (ENSSTOG00000006919) #30	TPT1 (ENSSTOG00000006931) #31
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000000196	WBP4 (ENSMMMG00000000179) #7	KBTBD7 (ENSMMMG00000000126)	MTRF1 (ENSMMMG00000000091) #9	NAA16 (ENSMMMG00000000060) #10	RGCC (ENSMMMG00000023619) #11	VWA8 (ENSMMMG00000023535) #12	DGKH (ENSMMMG00000023481) #13	AKAP11 (ENSMMMG00000023475) #14	TNFSF11 (ENSMMMG00000023474) #15	ENSMMMG00000023473 #16	EPSTI1 (ENSMMMG00000023471) #18	ENOX1 (ENSMMMG00000023468) #20	ENSMMMG00000023467	CCDC122 (ENSMMMG00000023465) #21	LACC1 (ENSMMMG00000023463) #22	TSC22D1 (ENSMMMG00000023448) #24	NUFIP1 (ENSMMMG00000023439) #25	ENSMMMG00000023437 #26	ENSMMMG00000023435	KCTD4 (ENSMMMG00000023434) #30	ENSMMMG00000023432 #29	ENSMMMG00000023427 ##31	SLC25A30 (ENSMMMG00000023425) #34	COG3 (ENSMMMG00000023415) #35	CBY2 (ENSMMMG00000023405) #36	SIAH3 (ENSMMMG00000023403) #37	ZC3H13 (ENSMMMG00000023343)	CPB2 (ENSMMMG00000023337)	LCP1 (ENSMMMG00000023327)	LRRC63 (ENSMMMG00000023317)
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b.f.a ##31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT01060000249039	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.a.p ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Hystricomorpha_b	ANCESTRAL SPECIES	44										ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT01060000249039	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b.f.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Long-tailed chinchilla	MODERN SPECIES	225											TNFSF11 (ENSCLAG00000000281) #15	EPSTI1 (ENSCLAG00000000332) #18	DNAJC15 (ENSCLAG00000000305) #19	ENOX1 (ENSCLAG00000000372) #20	CCDC122 (ENSCLAG00000001565) #21	LACC1 (ENSCLAG00000001645) #22	ENSCLAG00000001695	TSC22D1 (ENSCLAG00000001734) #24	NUFIP1 (ENSCLAG00000000114) #25	ENSCLAG00000000164 #26	ENSCLAG00000000205 #29	KCTD4 (ENSCLAG00000000309) #30	SLC25A30 (ENSCLAG00000000339) #34	COG3 (ENSCLAG00000000745) #35	CBY2 (ENSCLAG00000000430) #36	SIAH3 (ENSCLAG00000000493) #37	ZC3H13 (ENSCLAG00000000610)	CPB2 (ENSCLAG00000000655)	ENSCLAG00000000776	ENSCLAG00000000122	LCP1 (ENSCLAG00000000191)
Degu	MODERN SPECIES	163	LLGL1 (ENSODEG00000006178)	FLII (ENSODEG00000007385)	ENSODEG00000005602	ENSODEG00000005229	SMCR8 (ENSODEG00000007558)	SHMT1 (ENSODEG00000007205)	ENSODEG00000006233	ENSODEG00000006660	ENSODEG00000006486	TNFSF11 (ENSODEG00000006356) #15	FAM216B (ENSODEG00000005625) #17	ENSODEG00000006181 #19	ENSODEG00000019241	ENOX1 (ENSODEG00000005302) #20	CCDC122 (ENSODEG00000005141) #21	LACC1 (ENSODEG00000005776) #22	ENSODEG00000005627	SERP2 (ENSODEG00000007267) #23	ENSODEG00000006384	ENSODEG00000005705	NUFIP1 (ENSODEG00000006473) #25	ENSODEG00000006393	ENSODEG00000005907 #26	ENSODEG00000006647	KCTD4 (ENSODEG00000019362) #30	GTF2F2 (ENSODEG00000006595) #29	ENSODEG00000005658 ##31	SLC25A30 (ENSODEG00000005522) #34	COG3 (ENSODEG00000006373) #35	CBY2 (ENSODEG00000007190) #36	SIAH3 (ENSODEG00000006861) #37
Guinea pig	MODERN SPECIES	6	CNMD (ENSCPOG00000038512)	SUGT1 (ENSCPOG00000003374)	ELF1 (ENSCPOG00000004342)	WBP4 (ENSCPOG00000013860) #7	KBTBD7 (ENSCPOG00000008898)	MTRF1 (ENSCPOG00000005264) #9	RGCC (ENSCPOG00000035101) #11	VWA8 (ENSCPOG00000006076) #12	DGKH (ENSCPOG00000006087) #13	AKAP11 (ENSCPOG00000006094) #14	TNFSF11 (ENSCPOG00000031600) #15	ENSCPOG00000040476 #18	DNAJC15 (ENSCPOG00000003485) #19	ENOX1 (ENSCPOG00000020461) #20	CCDC122 (ENSCPOG00000003514) #21	LACC1 (ENSCPOG00000011253) #22	ENSCPOG00000031530	TSC22D1 (ENSCPOG00000000560) #24	NUFIP1 (ENSCPOG00000005828) #25	ENSCPOG00000026022 #26	GTF2F2 (ENSCPOG00000009342) #29	KCTD4 (ENSCPOG00000009346) #30	ENSCPOG00000009278 ##31	SLC25A30 (ENSCPOG00000031582) #34	COG3 (ENSCPOG00000009924) #35	CBY2 (ENSCPOG00000036575) #36	SIAH3 (ENSCPOG00000033748) #37	ZC3H13 (ENSCPOG00000000646)	CPB2 (ENSCPOG00000000649)	LCP1 (ENSCPOG00000001937)	RUBCNL (ENSCPOG00000008458)
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000035169	RGCC (ENSHGLG00000006185) #11	VWA8 (ENSHGLG00000007298) #12	DGKH (ENSHGLG00000018938) #13	ENSHGLG00000007054 #14	ENSHGLG00000046376	ENSHGLG00000036055	ENSHGLG00000043143 #15	FAM216B (ENSHGLG00000004363) #17	ENSHGLG00000034519 #18	ENSHGLG00000007301	DNAJC15 (ENSHGLG00000005490) #19	ENSHGLG00000037702	ENOX1 (ENSHGLG00000013344) #20	CCDC122 (ENSHGLG00000016595) #21	LACC1 (ENSHGLG00000019316) #22	ENSHGLG00000045625	SERP2 (ENSHGLG00000018907) #23	ENSHGLG00000048136	ENSHGLG00000038690	TSC22D1 (ENSHGLG00000009007) #24	NUFIP1 (ENSHGLG00000046882) #25	ENSHGLG00000041102 #26	KCTD4 (ENSHGLG00000008886) #30	ENSHGLG00000007884 #29	ENSHGLG00000005278 ##31	ENSHGLG00000003878	ENSHGLG00000003289 #34	ENSHGLG00000043699	ENSHGLG00000002801 #35	CBY2 (ENSHGLG00000009737) #36
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Kangaroo rat	MODERN SPECIES	320	Sugt1 (ENSDORG00000013064)	Elf1 (ENSDORG00000026436)	Wbp4 (ENSDORG00000007755) #7	Kbtbd7 (ENSDORG00000023750)	Mtrf1 (ENSDORG00000016429) #9	Naa16 (ENSDORG00000012584) #10	Rgcc (ENSDORG00000015195) #11	Vwa8 (ENSDORG00000011298) #12	Dgkh (ENSDORG00000005024) #13	Tnfsf11 (ENSDORG00000026136) #15	Fam216b (ENSDORG00000007655) #17	Epsti1 (ENSDORG00000004992) #18	Dnajc15 (ENSDORG00000013550) #19	Enox1 (ENSDORG00000001328) #20	Ccdc122 (ENSDORG00000015236) #21	Lacc1 (ENSDORG00000015240) #22	Serp2 (ENSDORG00000028153) #23	ENSDORG00000025839	Nufip1 (ENSDORG00000003359) #25	Gpalpp1 (ENSDORG00000003360) #26	Gtf2f2 (ENSDORG00000002860) #29	Kctd4 (ENSDORG00000003773) #30	Tpt1 (ENSDORG00000008518) ##31	Slc25a30 (ENSDORG00000004865) #34	Cog3 (ENSDORG00000002499) #35	Cby2 (ENSDORG00000026204) #36	Siah3 (ENSDORG00000024143) #37	Zc3h13 (ENSDORG00000000600)	Cpb2 (ENSDORG00000000602)	Lcp1 (ENSDORG00000000603)	Rubcnl (ENSDORG00000014634)
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Muroidea	ANCESTRAL SPECIES	25	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b.a #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b.a #26	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Chinese hamster chok1gshd	MODERN SPECIES	3	Mtrf1 (ENSCGRG00001003065) #9	ENSCGRG00001008906	Naa16 (ENSCGRG00001023139) #10	Rgcc (ENSCGRG00001010708) #11	ENSCGRG00001011992	ENSCGRG00001017855	Vwa8 (ENSCGRG00001023461) #12	Dgkh (ENSCGRG00001012161) #13	Akap11 (ENSCGRG00001020906) #14	Tnfsf11 (ENSCGRG00001013327) #15	Fam216b (ENSCGRG00001000086) #17	Epsti1 (ENSCGRG00001009306) #18	Dnajc15 (ENSCGRG00001000292) #19	Enox1 (ENSCGRG00001014073) #20	Ccdc122 (ENSCGRG00001006861) #21	Lacc1 (ENSCGRG00001020034) #22	Serp2 (ENSCGRG00001003518) #23	Tsc22d1 (ENSCGRG00001001346) #24	Nufip1 (ENSCGRG00001012209) #25	Gpalpp1 (ENSCGRG00001020996) #26	Kctd4 (ENSCGRG00001001160) #30	Gtf2f2 (ENSCGRG00001015200) #29	Tpt1 (ENSCGRG00001019454) ##31	Slc25a30 (ENSCGRG00001009475) #34	Cog3 (ENSCGRG00001023420) #35	Cby2 (ENSCGRG00001019775) #36	Siah3 (ENSCGRG00001022985) #37	Zc3h13 (ENSCGRG00001014490)	Cpb2 (ENSCGRG00001000100)	Lcp1 (ENSCGRG00001021099)	Lrrc63 (ENSCGRG00001021365)
Golden Hamster	MODERN SPECIES	642	Elf1 (ENSMAUG00000012901)	Wbp4 (ENSMAUG00000018253) #7	Kbtbd6 (ENSMAUG00000000372)	Kbtbd7 (ENSMAUG00000004183)	Mtrf1 (ENSMAUG00000011661) #9	Rgcc (ENSMAUG00000020733) #11	Vwa8 (ENSMAUG00000020740) #12	Dgkh (ENSMAUG00000017457) #13	Akap11 (ENSMAUG00000016985) #14	Tnfsf11 (ENSMAUG00000001005) #15	Fam216b (ENSMAUG00000014549) #17	Epsti1 (ENSMAUG00000018985) #18	Dnajc15 (ENSMAUG00000009642) #19	Enox1 (ENSMAUG00000019233) #20	ENSMAUG00000013996 #21	Lacc1 (ENSMAUG00000018912) #22	Serp2 (ENSMAUG00000019897) #23	ENSMAUG00000014274	Nufip1 (ENSMAUG00000021413) #25	Gpalpp1 (ENSMAUG00000021389) #26	Gtf2f2 (ENSMAUG00000018898) #29	Kctd4 (ENSMAUG00000005135) #30	Tpt1 (ENSMAUG00000014012) ##31	Slc25a30 (ENSMAUG00000012973) #34	Cog3 (ENSMAUG00000018785) #35	Cby2 (ENSMAUG00000021027) #36	Siah3 (ENSMAUG00000016684) #37	ENSMAUG00000005243	Cpb2 (ENSMAUG00000011270)	ENSMAUG00000017813	Lrrc63 (ENSMAUG00000017212)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00390000003758 #25	ENSGT00390000012569.b.a #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860
Prairie vole	MODERN SPECIES	4	Tgds (ENSMOCG00000021583)	Dct (ENSMOCG00000019333)	Gpc6 (ENSMOCG00000022265)	Gpc5 (ENSMOCG00000011002)	ENSMOCG00000003746	Slitrk5 (ENSMOCG00000019120)	ENSMOCG00000006881	ENSMOCG00000017964	Slitrk6 (ENSMOCG00000013923)	ENSMOCG00000005944	ENSMOCG00000007797	ENSMOCG00000017655	Slitrk1 (ENSMOCG00000008123)	ENSMOCG00000014539	Enox1 (ENSMOCG00000012930) #20	Lacc1 (ENSMOCG00000011112) #22	Serp2 (ENSMOCG00000022234) #23	ENSMOCG00000018072	Nufip1 (ENSMOCG00000008223) #25	ENSMOCG00000009812 #26	Kctd4 (ENSMOCG00000008795) #30	Gtf2f2 (ENSMOCG00000020515) #29	ENSMOCG00000016698 ##31	Slc25a30 (ENSMOCG00000010410) #34	Cog3 (ENSMOCG00000002598) #35	Cby2 (ENSMOCG00000014959) #36	Siah3 (ENSMOCG00000009347) #37	ENSMOCG00000001346	Cpb2 (ENSMOCG00000006393)	Lcp1 (ENSMOCG00000010746)	Lrrc63 (ENSMOCG00000018528)
Northern American deer mouse	MODERN SPECIES	22	Elf1 (ENSPEMG00000021551)	Wbp4 (ENSPEMG00000021764) #7	Kbtbd7 (ENSPEMG00000015250)	Mtrf1 (ENSPEMG00000020982) #9	Naa16 (ENSPEMG00000021265) #10	Rgcc (ENSPEMG00000013380) #11	Vwa8 (ENSPEMG00000016456) #12	Dgkh (ENSPEMG00000020442) #13	Akap11 (ENSPEMG00000017768) #14	Tnfsf11 (ENSPEMG00000026330) #15	Fam216b (ENSPEMG00000010168) #17	Epsti1 (ENSPEMG00000012785) #18	Dnajc15 (ENSPEMG00000017585) #19	Enox1 (ENSPEMG00000009188) #20	Ccdc122 (ENSPEMG00000013832) #21	Lacc1 (ENSPEMG00000011166) #22	ENSPEMG00000024909	Tsc22d1 (ENSPEMG00000022760) #24	ENSPEMG00000012421	Nufip1 (ENSPEMG00000023639) #25	Gpalpp1 (ENSPEMG00000000218) #26	Kctd4 (ENSPEMG00000006357) #30	Gtf2f2 (ENSPEMG00000027889) #29	Tpt1 (ENSPEMG00000001813) ##31	Slc25a30 (ENSPEMG00000022181) #34	Cog3 (ENSPEMG00000020827) #35	Cby2 (ENSPEMG00000020758) #36	Siah3 (ENSPEMG00000028254) #37	Zc3h13 (ENSPEMG00000021979)	Cpb2 (ENSPEMG00000021086)	Lcp1 (ENSPEMG00000009810)
Murinae	ANCESTRAL SPECIES	16	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b.c.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus	ANCESTRAL SPECIES	8	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00860000135855	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b.c.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00940000157896.f	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00860000135855	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b.c.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00940000157896.f	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00860000135855	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b.c.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00940000157896.f	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00860000135855	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.b.c.b.c.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00520000061084	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020436	Mtrf1 (MGP_SPRETEiJ_G0020435) #9	Naa16 (MGP_SPRETEiJ_G0020434) #10	Rgcc (MGP_SPRETEiJ_G0020433) #11	Zfp957 (MGP_SPRETEiJ_G0020432)	Vwa8 (MGP_SPRETEiJ_G0020431) #12	Dgkh (MGP_SPRETEiJ_G0020430) #13	Akap11 (MGP_SPRETEiJ_G0020429) #14	Tnfsf11 (MGP_SPRETEiJ_G0020428) #15	Fam216b (MGP_SPRETEiJ_G0020427) #17	Epsti1 (MGP_SPRETEiJ_G0020426) #18	Dnajc15 (MGP_SPRETEiJ_G0020425) #19	MGP_SPRETEiJ_G0020424	Enox1 (MGP_SPRETEiJ_G0020423) #20	Ccdc122 (MGP_SPRETEiJ_G0020422) #21	MGP_SPRETEiJ_G0020421 #22	Serp2 (MGP_SPRETEiJ_G0020420) #23	Tsc22d1 (MGP_SPRETEiJ_G0020419) #24	Nufip1 (MGP_SPRETEiJ_G0020418) #25	Gpalpp1 (MGP_SPRETEiJ_G0020417) #26	Kctd4 (MGP_SPRETEiJ_G0020416) #30	Gtf2f2 (MGP_SPRETEiJ_G0020415) #29	Tpt1 (MGP_SPRETEiJ_G0020414) ##31	Slc25a30 (MGP_SPRETEiJ_G0020413) #34	Cog3 (MGP_SPRETEiJ_G0020412) #35	MGP_SPRETEiJ_G0020411	Cby2 (MGP_SPRETEiJ_G0020410) #36	Siah3 (MGP_SPRETEiJ_G0020409) #37	MGP_SPRETEiJ_G0020408	Zc3h13 (MGP_SPRETEiJ_G0020407)	Cpb2 (MGP_SPRETEiJ_G0020406)
Steppe mouse	MODERN SPECIES	3340											ENSMSIG00000022018 #19	ENSMSIG00000022012	ENSMSIG00000021990	Enox1 (ENSMSIG00000021850) #20	Ccdc122 (ENSMSIG00000021826) #21	Lacc1 (ENSMSIG00000021816) #22	ENSMSIG00000021792 #23	Tsc22d1 (ENSMSIG00000021724) #24	Nufip1 (ENSMSIG00000021714) #25	Gpalpp1 (ENSMSIG00000021703) #26	Kctd4 (ENSMSIG00000021688) #30	ENSMSIG00000021679	Gtf2f2 (ENSMSIG00000021660) #29	ENSMSIG00000021620 ##31	ENSMSIG00000021594 #34	Cog3 (ENSMSIG00000021489) #35	ENSMSIG00000021463	Cby2 (ENSMSIG00000021441) #36	Siah3 (ENSMSIG00000021424) #37	Zc3h13 (ENSMSIG00000021317)	Cpb2 (ENSMSIG00000021306)
Mouse	MODERN SPECIES	5	Kbtbd6 (ENSMUSG00000075502)	Kbtbd7 (ENSMUSG00000043881)	Mtrf1 (ENSMUSG00000022022) #9	Naa16 (ENSMUSG00000022020) #10	Rgcc (ENSMUSG00000022018) #11	Zfp957 (ENSMUSG00000071262)	Vwa8 (ENSMUSG00000058997) #12	Dgkh (ENSMUSG00000034731) #13	Akap11 (ENSMUSG00000022016) #14	Tnfsf11 (ENSMUSG00000022015) #15	Fam216b (ENSMUSG00000045655) #17	Epsti1 (ENSMUSG00000022014) #18	Dnajc15 (ENSMUSG00000022013) #19	Enox1 (ENSMUSG00000022012) #20	Ccdc122 (ENSMUSG00000034795) #21	Lacc1 (ENSMUSG00000044350) #22	Serp2 (ENSMUSG00000052584) #23	Tsc22d1 (ENSMUSG00000022010) #24	Nufip1 (ENSMUSG00000022009) #25	Gpalpp1 (ENSMUSG00000022008) #26	Kctd4 (ENSMUSG00000046523) #30	Gtf2f2 (ENSMUSG00000067995) #29	Tpt1 (ENSMUSG00000060126) ##31	Slc25a30 (ENSMUSG00000022003) #34	Cog3 (ENSMUSG00000034893) #35	Erich6b (ENSMUSG00000022002)	Cby2 (ENSMUSG00000034913) #36	Siah3 (ENSMUSG00000091722) #37	Zc3h13 (ENSMUSG00000022000)	Cpb2 (ENSMUSG00000021999)	Lcp1 (ENSMUSG00000021998)
Ryukyu mouse	MODERN SPECIES	5	Kbtbd7 (MGP_CAROLIEiJ_G0019540)	Mtrf1 (MGP_CAROLIEiJ_G0019539) #9	Naa16 (MGP_CAROLIEiJ_G0019538) #10	Rgcc (MGP_CAROLIEiJ_G0019537) #11	MGP_CAROLIEiJ_G0019536	Vwa8 (MGP_CAROLIEiJ_G0019535) #12	Dgkh (MGP_CAROLIEiJ_G0019534) #13	Akap11 (MGP_CAROLIEiJ_G0019533) #14	Tnfsf11 (MGP_CAROLIEiJ_G0019532) #15	Fam216b (MGP_CAROLIEiJ_G0019531) #17	Epsti1 (MGP_CAROLIEiJ_G0019530) #18	Dnajc15 (MGP_CAROLIEiJ_G0019529) #19	MGP_CAROLIEiJ_G0019528	Enox1 (MGP_CAROLIEiJ_G0019527) #20	Ccdc122 (MGP_CAROLIEiJ_G0019526) #21	MGP_CAROLIEiJ_G0019525 #22	Serp2 (MGP_CAROLIEiJ_G0019524) #23	Tsc22d1 (MGP_CAROLIEiJ_G0019523) #24	Nufip1 (MGP_CAROLIEiJ_G0019522) #25	Gpalpp1 (MGP_CAROLIEiJ_G0019521) #26	Kctd4 (MGP_CAROLIEiJ_G0019520) #30	Gtf2f2 (MGP_CAROLIEiJ_G0019519) #29	Tpt1 (MGP_CAROLIEiJ_G0019518) ##31	Slc25a30 (MGP_CAROLIEiJ_G0019517) #34	Cog3 (MGP_CAROLIEiJ_G0019516) #35	MGP_CAROLIEiJ_G0019515	Cby2 (MGP_CAROLIEiJ_G0019514) #36	Siah3 (MGP_CAROLIEiJ_G0019513) #37	Zc3h13 (MGP_CAROLIEiJ_G0019512)	Cpb2 (MGP_CAROLIEiJ_G0019511)	Lcp1 (MGP_CAROLIEiJ_G0019510)
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030559	Kbtbd7 (MGP_PahariEiJ_G0030558)	Mtrf1 (MGP_PahariEiJ_G0030557) #9	Naa16 (MGP_PahariEiJ_G0030556) #10	Rgcc (MGP_PahariEiJ_G0030555) #11	Vwa8 (MGP_PahariEiJ_G0030553) #12	Dgkh (MGP_PahariEiJ_G0030552) #13	Akap11 (MGP_PahariEiJ_G0030551) #14	Tnfsf11 (MGP_PahariEiJ_G0030550) #15	Fam216b (MGP_PahariEiJ_G0030549) #17	Epsti1 (MGP_PahariEiJ_G0030548) #18	Dnajc15 (MGP_PahariEiJ_G0030547) #19	MGP_PahariEiJ_G0030546	Enox1 (MGP_PahariEiJ_G0030545) #20	Ccdc122 (MGP_PahariEiJ_G0030544) #21	Lacc1 (MGP_PahariEiJ_G0030543) #22	Serp2 (MGP_PahariEiJ_G0030542) #23	Tsc22d1 (MGP_PahariEiJ_G0030541) #24	Nufip1 (MGP_PahariEiJ_G0030540) #25	Gpalpp1 (MGP_PahariEiJ_G0030539) #26	Kctd4 (MGP_PahariEiJ_G0030538) #30	Gtf2f2 (MGP_PahariEiJ_G0030537) #29	Tpt1 (MGP_PahariEiJ_G0030536) ##31	Slc25a30 (MGP_PahariEiJ_G0030535) #34	Cog3 (MGP_PahariEiJ_G0030534) #35	MGP_PahariEiJ_G0030533	Cby2 (MGP_PahariEiJ_G0030532) #36	Siah3 (MGP_PahariEiJ_G0030531) #37	Zc3h13 (MGP_PahariEiJ_G0030530)	Cpb2 (MGP_PahariEiJ_G0030529)	Lcp1 (MGP_PahariEiJ_G0030528)
Rat	MODERN SPECIES	6	Kbtbd7 (ENSRNOG00000064764)	Mtrf1 (ENSRNOG00000047106) #9	Naa16 (ENSRNOG00000045863) #10	ENSRNOG00000067430	Rgcc (ENSRNOG00000042960) #11	ENSRNOG00000064147	Vwa8 (ENSRNOG00000053145) #12	Dgkh (ENSRNOG00000010065) #13	Akap11 (ENSRNOG00000009987) #14	Tnfsf11 (ENSRNOG00000071047) #15	Fam216b (ENSRNOG00000021943) #17	Epsti1 (ENSRNOG00000009471) #18	Dnajc15 (ENSRNOG00000009063) #19	Enox1 (ENSRNOG00000047817) #20	Ccdc122 (ENSRNOG00000042404) #21	Lacc1 (ENSRNOG00000022094) #22	Serp2 (ENSRNOG00000038228) #23	Tsc22d1 (ENSRNOG00000001030) #24	ENSRNOG00000070802	Nufip1 (ENSRNOG00000001033) #25	Gpalpp1 (ENSRNOG00000001037) #26	Kctd4 (ENSRNOG00000050996) #30	Gtf2f2 (ENSRNOG00000029316) #29	Tpt1 (ENSRNOG00000001049) ##31	Slc25a30 (ENSRNOG00000001052) #34	Cog3 (ENSRNOG00000000155) #35	Cby2 (ENSRNOG00000047413) #36	Siah3 (ENSRNOG00000043061) #37	Zc3h13 (ENSRNOG00000011237)	Cpb2 (ENSRNOG00000010935)	Lcp1 (ENSRNOG00000010319)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1698	Kbtbd7 (ENSNGAG00000011545)	Mtrf1 (ENSNGAG00000014460) #9	Naa16 (ENSNGAG00000004140) #10	Rgcc (ENSNGAG00000022423) #11	Vwa8 (ENSNGAG00000010244) #12	Dgkh (ENSNGAG00000024075) #13	Akap11 (ENSNGAG00000010398) #14	Tnfsf11 (ENSNGAG00000023783) #15	ENSNGAG00000009242	Fam216b (ENSNGAG00000008030) #17	Epsti1 (ENSNGAG00000020070) #18	Dnajc15 (ENSNGAG00000012778) #19	Enox1 (ENSNGAG00000024175) #20	ENSNGAG00000010951	Ccdc122 (ENSNGAG00000022365) #21	Lacc1 (ENSNGAG00000023659) #22
Lesser Egyptian jerboa	MODERN SPECIES	126															Ccdc122 (ENSJJAG00000021044) #21	Lacc1 (ENSJJAG00000021351) #22	ENSJJAG00000021469	Serp2 (ENSJJAG00000021557) #23	ENSJJAG00000015078	Nufip1 (ENSJJAG00000015369) #25	Gpalpp1 (ENSJJAG00000015544) #26	Gtf2f2 (ENSJJAG00000015891) #29	Kctd4 (ENSJJAG00000012151) #30	ENSJJAG00000016541 ##31	ENSJJAG00000016940	Slc25a30 (ENSJJAG00000017335) #34	Cog3 (ENSJJAG00000018271) #35	Cby2 (ENSJJAG00000019147) #36	Siah3 (ENSJJAG00000019440) #37	ENSJJAG00000019522	Zc3h13 (ENSJJAG00000019971)
Lagomorpha	ANCESTRAL SPECIES	56	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Rabbit	MODERN SPECIES	19	ENSOCUG00000032894	ENSOCUG00000021190	ENSOCUG00000014903 #11	ENSOCUG00000039664	VWA8 (ENSOCUG00000014909) #12	DGKH (ENSOCUG00000015981) #13	AKAP11 (ENSOCUG00000016016) #14	ENSOCUG00000006608	TNFSF11 (ENSOCUG00000011051) #15	EPSTI1 (ENSOCUG00000000716) #18	DNAJC15 (ENSOCUG00000001696) #19	ENOX1 (ENSOCUG00000006639) #20	ENSOCUG00000034735	ENSOCUG00000031598	CCDC122 (ENSOCUG00000015938) #21	LACC1 (ENSOCUG00000016531) #22	SMIM2 (ENSOCUG00000035641)	SERP2 (ENSOCUG00000016375) #23	ENSOCUG00000030090	ENSOCUG00000027968	NUFIP1 (ENSOCUG00000007273) #25	ENSOCUG00000007277 #26	KCTD4 (ENSOCUG00000013829) #30	GTF2F2 (ENSOCUG00000003537) #29	ENSOCUG00000023692 #31	SLC25A30 (ENSOCUG00000008419) #34	COG3 (ENSOCUG00000002476) #35	ENSOCUG00000002490	CBY2 (ENSOCUG00000014037) #36	SIAH3 (ENSOCUG00000029756) #37	ENSOCUG00000024639
Pika	MODERN SPECIES	2212																LACC1 (ENSOPRG00000013275) #22
Tree shrew	MODERN SPECIES	2537															CCDC122 (ENSTBEG00000002292) #21	LACC1 (ENSTBEG00000002790) #22
Primates	ANCESTRAL SPECIES	26	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Haplorrhini	ANCESTRAL SPECIES	28	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a.c	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Hominidae	ANCESTRAL SPECIES	23	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a.c	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a.c	ENSGT00390000003758.c #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a.c	ENSGT00390000003758.c #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Pan	ANCESTRAL SPECIES	22	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154351.k.b.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a.c	ENSGT00390000003758.c #25	ENSGT00390000012569.b #26	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000159552 #30	ENSGT00410000028070.c	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Bonobo	MODERN SPECIES	16	TMEM44 (ENSPPAG00000038345)	ATP13A3 (ENSPPAG00000041433)	GP5 (ENSPPAG00000036894)	LRRC15 (ENSPPAG00000029069)	CPN2 (ENSPPAG00000020911)	ENSPPAG00000019511	HES1 (ENSPPAG00000002074)	OPA1 (ENSPPAG00000036156)	ATP13A4 (ENSPPAG00000013514)	ATP13A5 (ENSPPAG00000031276)	ENSPPAG00000032718	ENSPPAG00000027469	MB21D2 (ENSPPAG00000010683)	ENSPPAG00000035279	ENSPPAG00000040435 #21	LACC1 (ENSPPAG00000034545) #22	SMIM2 (ENSPPAG00000029243)	ENSPPAG00000041381 #23	TSC22D1 (ENSPPAG00000039757) #24	ENSPPAG00000028290	NUFIP1 (ENSPPAG00000027467) #25	ENSPPAG00000043786 #26	KCTD4 (ENSPPAG00000012273) #30	GTF2F2 (ENSPPAG00000035711) #29	TPT1 (ENSPPAG00000041854) #31	PYDC2 (ENSPPAG00000003263)	CCDC50 (ENSPPAG00000029089)	ENSPPAG00000005215	OSTN (ENSPPAG00000031371)	GMNC (ENSPPAG00000017215)	ENSPPAG00000008766
Chimpanzee	MODERN SPECIES	4	MTRF1 (ENSPTRG00000005815) #9	NAA16 (ENSPTRG00000005816) #10	ENSPTRG00000048809	RGCC (ENSPTRG00000005819) #11	VWA8 (ENSPTRG00000005820) #12	DGKH (ENSPTRG00000005823) #13	ENSPTRG00000042691	AKAP11 (ENSPTRG00000005824) #14	ENSPTRG00000050423	TNFSF11 (ENSPTRG00000005827) #15	FAM216B (ENSPTRG00000050984) #17	EPSTI1 (ENSPTRG00000045006) #18	DNAJC15 (ENSPTRG00000047723) #19	ENOX1 (ENSPTRG00000005832) #20	CCDC122 (ENSPTRG00000005833) #21	LACC1 (ENSPTRG00000005834) #22	SMIM2 (ENSPTRG00000045031)	SERP2 (ENSPTRG00000049445) #23	TSC22D1 (ENSPTRG00000005837) #24	ENSPTRG00000048209	NUFIP1 (ENSPTRG00000005838) #25	GPALPP1 (ENSPTRG00000024388)	GTF2F2 (ENSPTRG00000005840) #29	KCTD4 (ENSPTRG00000047173) #30	TPT1 (ENSPTRG00000042843) #31	ENSPTRG00000044135	SLC25A30 (ENSPTRG00000005845) #34	COG3 (ENSPTRG00000005847) #35	ERICH6B (ENSPTRG00000005848)	CBY2 (ENSPTRG00000051708) #36	SIAH3 (ENSPTRG00000047082) #37
Human	MODERN SPECIES	4	WBP4 (ENSG00000120688) #7	KBTBD6 (ENSG00000165572)	KBTBD7 (ENSG00000120696)	MTRF1 (ENSG00000120662) #9	NAA16 (ENSG00000172766) #10	RGCC (ENSG00000102760) #11	VWA8 (ENSG00000102763) #12	DGKH (ENSG00000102780) #13	AKAP11 (ENSG00000023516) #14	TNFSF11 (ENSG00000120659) #15	FAM216B (ENSG00000179813) #17	EPSTI1 (ENSG00000133106) #18	DNAJC15 (ENSG00000120675) #19	ENOX1 (ENSG00000120658) #20	CCDC122 (ENSG00000151773) #21	LACC1 (ENSG00000179630) #22	SMIM2 (ENSG00000139656)	SERP2 (ENSG00000151778) #23	TSC22D1 (ENSG00000102804) #24	NUFIP1 (ENSG00000083635) #25	GPALPP1 (ENSG00000133114)	GTF2F2 (ENSG00000188342) #29	KCTD4 (ENSG00000180332) #30	TPT1 (ENSG00000133112) #31	SLC25A30 (ENSG00000174032) #34	COG3 (ENSG00000136152) #35	ERICH6B (ENSG00000165837)	CBY2 (ENSG00000174015) #36	SIAH3 (ENSG00000215475) #37	ZC3H13 (ENSG00000123200)	CPB2 (ENSG00000080618)
Gorilla	MODERN SPECIES	4	MTRF1 (ENSGGOG00000002529) #9	ENSGGOG00000015823 #10	ENSGGOG00000043860	ENSGGOG00000023196 #10	ENSGGOG00000042092	RGCC (ENSGGOG00000002722) #11	VWA8 (ENSGGOG00000009902) #12	DGKH (ENSGGOG00000000410) #13	AKAP11 (ENSGGOG00000013285) #14	TNFSF11 (ENSGGOG00000011190) #15	FAM216B (ENSGGOG00000042846) #17	ENSGGOG00000000804 #18	DNAJC15 (ENSGGOG00000016338) #19	ENOX1 (ENSGGOG00000006190) #20	CCDC122 (ENSGGOG00000026396) #21	LACC1 (ENSGGOG00000008935) #22	SMIM2 (ENSGGOG00000000280)	SERP2 (ENSGGOG00000044163) #23	TSC22D1 (ENSGGOG00000012857) #24	ENSGGOG00000038865	NUFIP1 (ENSGGOG00000000356) #25	GPALPP1 (ENSGGOG00000027345)	GTF2F2 (ENSGGOG00000006657) #29	KCTD4 (ENSGGOG00000038712) #30	TPT1 (ENSGGOG00000001684) #31	SLC25A30 (ENSGGOG00000012295) #34	COG3 (ENSGGOG00000006014) #35	ERICH6B (ENSGGOG00000006343)	CBY2 (ENSGGOG00000010156) #36	SIAH3 (ENSGGOG00000001856) #37	ZC3H13 (ENSGGOG00000005496)
Orangutan	MODERN SPECIES	4	KBTBD6 (ENSPPYG00000037658)	KBTBD7 (ENSPPYG00000032922)	MTRF1 (ENSPPYG00000005313) #9	NAA16 (ENSPPYG00000005314) #10	RGCC (ENSPPYG00000005316) #11	VWA8 (ENSPPYG00000005317) #12	DGKH (ENSPPYG00000005318) #13	AKAP11 (ENSPPYG00000005319) #14	ENSPPYG00000034024	TNFSF11 (ENSPPYG00000005320) #15	FAM216B (ENSPPYG00000005321) #17	ENSPPYG00000005322 #18	DNAJC15 (ENSPPYG00000005323) #19	ENOX1 (ENSPPYG00000005324) #20	CCDC122 (ENSPPYG00000005326) #21	LACC1 (ENSPPYG00000005327) #22	SMIM2 (ENSPPYG00000005328)	SERP2 (ENSPPYG00000014205) #23	TSC22D1 (ENSPPYG00000005330) #24	NUFIP1 (ENSPPYG00000005331) #25	GPALPP1 (ENSPPYG00000005332) #26	GTF2F2 (ENSPPYG00000005333) #29	KCTD4 (ENSPPYG00000005334) #30	ENSPPYG00000005335 #31	SLC25A30 (ENSPPYG00000005339) #34	COG3 (ENSPPYG00000005340) #35	ERICH6B (ENSPPYG00000005341)	CBY2 (ENSPPYG00000005342) #36	SIAH3 (ENSPPYG00000040754) #37	ZC3H13 (ENSPPYG00000005344)	CPB2 (ENSPPYG00000005345)
Gibbon	MODERN SPECIES	20	NAA16 (ENSNLEG00000001282) #10	ENSNLEG00000018204	RGCC (ENSNLEG00000001295) #11	VWA8 (ENSNLEG00000001302) #12	DGKH (ENSNLEG00000001525) #13	ENSNLEG00000033442	AKAP11 (ENSNLEG00000001589) #14	TNFSF11 (ENSNLEG00000031302) #15	FAM216B (ENSNLEG00000033194) #17	ENSNLEG00000001705 #18	ENSNLEG00000018241	ENSNLEG00000027236	DNAJC15 (ENSNLEG00000035144) #19	ENOX1 (ENSNLEG00000001817) #20	CCDC122 (ENSNLEG00000001927) #21	LACC1 (ENSNLEG00000001935) #22	SMIM2 (ENSNLEG00000018205)	SERP2 (ENSNLEG00000029213) #23	TSC22D1 (ENSNLEG00000001960) #24	NUFIP1 (ENSNLEG00000002021) #25	GPALPP1 (ENSNLEG00000030453)	GTF2F2 (ENSNLEG00000002097) #29	KCTD4 (ENSNLEG00000028562) #30	TPT1 (ENSNLEG00000002108) #31	COG3 (ENSNLEG00000002232) #35	ERICH6B (ENSNLEG00000002437)	CBY2 (ENSNLEG00000002469) #36	SIAH3 (ENSNLEG00000002491) #37	ZC3H13 (ENSNLEG00000002498)	CPB2 (ENSNLEG00000002561)	LCP1 (ENSNLEG00000002616)
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Macaca	ANCESTRAL SPECIES	19	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.m.a #31	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Pig-tailed macaque	MODERN SPECIES	180	KBTBD6 (ENSMNEG00000038336)	KBTBD7 (ENSMNEG00000018279)	MTRF1 (ENSMNEG00000035487) #9	NAA16 (ENSMNEG00000036159) #10	RGCC (ENSMNEG00000036862) #11	VWA8 (ENSMNEG00000039926) #12	DGKH (ENSMNEG00000038131) #13	AKAP11 (ENSMNEG00000045160) #14	ENSMNEG00000036293	TNFSF11 (ENSMNEG00000031662) #15	FAM216B (ENSMNEG00000040597) #17	EPSTI1 (ENSMNEG00000027227) #18	DNAJC15 (ENSMNEG00000039087) #19	ENOX1 (ENSMNEG00000040967) #20	CCDC122 (ENSMNEG00000039888) #21	LACC1 (ENSMNEG00000045105) #22	SMIM2 (ENSMNEG00000042675)	SERP2 (ENSMNEG00000042638) #23	TSC22D1 (ENSMNEG00000000209) #24	ENSMNEG00000035585	ENSMNEG00000004676	NUFIP1 (ENSMNEG00000033299) #25	GPALPP1 (ENSMNEG00000033610)	KCTD4 (ENSMNEG00000025133) #30	GTF2F2 (ENSMNEG00000033303) #29	ENSMNEG00000045220 #31
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.b.b.a.a	ENSGT00390000006051.a.b.a.b.m.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Rhesus	MODERN SPECIES	8	KBTBD7 (ENSMMUG00000004799)	MTRF1 (ENSMMUG00000017978) #9	NAA16 (ENSMMUG00000011590) #10	RGCC (ENSMMUG00000011593) #11	VWA8 (ENSMMUG00000011594) #12	ENSMMUG00000055578	DGKH (ENSMMUG00000023076) #13	AKAP11 (ENSMMUG00000023083) #14	TNFSF11 (ENSMMUG00000017876) #15	FAM216B (ENSMMUG00000014925) #17	EPSTI1 (ENSMMUG00000014926) #18	ENSMMUG00000056651	DNAJC15 (ENSMMUG00000052269) #19	ENOX1 (ENSMMUG00000002330) #20	CCDC122 (ENSMMUG00000007070) #21	LACC1 (ENSMMUG00000011308) #22	SMIM2 (ENSMMUG00000062188)	SERP2 (ENSMMUG00000044916) #23	TSC22D1 (ENSMMUG00000003753) #24	ENSMMUG00000060716	NUFIP1 (ENSMMUG00000016609) #25	GPALPP1 (ENSMMUG00000016612)	ENSMMUG00000054319	GTF2F2 (ENSMMUG00000062575) #29	KCTD4 (ENSMMUG00000012636) #30	ENSMMUG00000049780	TPT1 (ENSMMUG00000022979) #31	SLC25A30 (ENSMMUG00000037790) #34	COG3 (ENSMMUG00000018409) #35	ERICH6B (ENSMMUG00000044896)	CBY2 (ENSMMUG00000011986) #36
Crab-eating macaque	MODERN SPECIES	8	KBTBD6 (ENSMFAG00000056684)	KBTBD7 (ENSMFAG00000002271)	MTRF1 (ENSMFAG00000037972) #9	NAA16 (ENSMFAG00000043606) #10	RGCC (ENSMFAG00000043030) #11	VWA8 (ENSMFAG00000036408) #12	DGKH (ENSMFAG00000038026) #13	AKAP11 (ENSMFAG00000003034) #14	ENSMFAG00000047641	TNFSF11 (ENSMFAG00000057769) #15	FAM216B (ENSMFAG00000045377) #17	EPSTI1 (ENSMFAG00000040540) #18	DNAJC15 (ENSMFAG00000011195) #19	ENOX1 (ENSMFAG00000025611) #20	CCDC122 (ENSMFAG00000032197) #21	LACC1 (ENSMFAG00000032425) #22	SMIM2 (ENSMFAG00000059404)	ENSMFAG00000032491 #23	TSC22D1 (ENSMFAG00000003381) #24	NUFIP1 (ENSMFAG00000033059) #25	GPALPP1 (ENSMFAG00000033152)	GTF2F2 (ENSMFAG00000015620) #29	KCTD4 (ENSMFAG00000038976) #30	TPT1 (ENSMFAG00000031958) #31	ENSMFAG00000048937	SLC25A30 (ENSMFAG00000035809) #34	COG3 (ENSMFAG00000033101) #35	ERICH6B (ENSMFAG00000044485)	ENSMFAG00000031871	CBY2 (ENSMFAG00000039854) #36	ENSMFAG00000055119
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601.k #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015396	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Olive baboon	MODERN SPECIES	6	RGCC (ENSPANG00000007573) #11	VWA8 (ENSPANG00000024519) #12	DGKH (ENSPANG00000002940) #13	AKAP11 (ENSPANG00000012071) #14	TNFSF11 (ENSPANG00000032369) #15	FAM216B (ENSPANG00000016866) #17	EPSTI1 (ENSPANG00000012981) #18	ENSPANG00000047876	DNAJC15 (ENSPANG00000016508) #19	ENSPANG00000039549	ENSPANG00000041181	ENOX1 (ENSPANG00000017128) #20	ENSPANG00000050631	ENSPANG00000041630	CCDC122 (ENSPANG00000021626) #21	LACC1 (ENSPANG00000009474) #22	SMIM2 (ENSPANG00000012229)	ENSPANG00000036191 #23	TSC22D1 (ENSPANG00000039281) #24	NUFIP1 (ENSPANG00000014890) #25	ENSPANG00000048298 #26	GTF2F2 (ENSPANG00000023048) #29	KCTD4 (ENSPANG00000004546) #30	TPT1 (ENSPANG00000005716) #31	SLC25A30 (ENSPANG00000018184) #34	ENSPANG00000047840	COG3 (ENSPANG00000012226) #35	ERICH6B (ENSPANG00000017954)	CBY2 (ENSPANG00000017956) #36	SIAH3 (ENSPANG00000012225) #37	ZC3H13 (ENSPANG00000014127)
Cercopithecinae_d	ANCESTRAL SPECIES	54	ENSGT00940000155175.B	ENSGT00940000164310.e	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601.k #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Sooty mangabey	MODERN SPECIES	125	WBP4 (ENSCATG00000035168) #7	KBTBD6 (ENSCATG00000011867)	KBTBD7 (ENSCATG00000011239)	MTRF1 (ENSCATG00000009909) #9	NAA16 (ENSCATG00000041542) #10	RGCC (ENSCATG00000045340) #11	VWA8 (ENSCATG00000033144) #12	DGKH (ENSCATG00000033157) #13	AKAP11 (ENSCATG00000033496) #14	TNFSF11 (ENSCATG00000025191) #15	FAM216B (ENSCATG00000043583) #17	EPSTI1 (ENSCATG00000015725) #18	DNAJC15 (ENSCATG00000042886) #19	ENOX1 (ENSCATG00000023824) #20	CCDC122 (ENSCATG00000017564) #21	LACC1 (ENSCATG00000038160) #22	SMIM2 (ENSCATG00000018859)	SERP2 (ENSCATG00000045178) #23	TSC22D1 (ENSCATG00000015087) #24	NUFIP1 (ENSCATG00000002411) #25	ENSCATG00000034187 #26	KCTD4 (ENSCATG00000012765) #30	GTF2F2 (ENSCATG00000039711) #29	TPT1 (ENSCATG00000031478) #31	SLC25A30 (ENSCATG00000035355) #34	COG3 (ENSCATG00000044753) #35	ERICH6B (ENSCATG00000039491)	CBY2 (ENSCATG00000034428) #36	SIAH3 (ENSCATG00000033729) #37	ZC3H13 (ENSCATG00000041075)	ENSCATG00000007236
Drill	MODERN SPECIES	465						ENSMLEG00000030444 #12	DGKH (ENSMLEG00000018820) #13	AKAP11 (ENSMLEG00000042723) #14	ENSMLEG00000036105	TNFSF11 (ENSMLEG00000043519) #15	FAM216B (ENSMLEG00000029691) #17	EPSTI1 (ENSMLEG00000042839) #18	DNAJC15 (ENSMLEG00000035648) #19	ENOX1 (ENSMLEG00000027764) #20	CCDC122 (ENSMLEG00000034489) #21	LACC1 (ENSMLEG00000035433) #22	SMIM2 (ENSMLEG00000044402)	SERP2 (ENSMLEG00000028135) #23	TSC22D1 (ENSMLEG00000033850) #24	ENSMLEG00000031148	NUFIP1 (ENSMLEG00000027383) #25	ENSMLEG00000038702 #26	KCTD4 (ENSMLEG00000023023) #30	GTF2F2 (ENSMLEG00000014777) #29	ENSMLEG00000011456 #31	SLC25A30 (ENSMLEG00000028851) #34	ENSMLEG00000020975	COG3 (ENSMLEG00000020702) #35	ERICH6B (ENSMLEG00000005620)	CBY2 (ENSMLEG00000031233) #36	SIAH3 (ENSMLEG00000038769) #37
Vervet Monkey	MODERN SPECIES	22	WBP4 (ENSCSAG00000017836) #7	KBTBD6 (ENSCSAG00000018601)	KBTBD7 (ENSCSAG00000018604)	MTRF1 (ENSCSAG00000017835) #9	NAA16 (ENSCSAG00000017833) #10	RGCC (ENSCSAG00000017831) #11	VWA8 (ENSCSAG00000017823) #12	DGKH (ENSCSAG00000017813) #13	AKAP11 (ENSCSAG00000017811) #14	TNFSF11 (ENSCSAG00000017803) #15	FAM216B (ENSCSAG00000017800) #17	EPSTI1 (ENSCSAG00000017797) #18	DNAJC15 (ENSCSAG00000017791) #19	ENOX1 (ENSCSAG00000017789) #20	CCDC122 (ENSCSAG00000017787) #21	LACC1 (ENSCSAG00000017785) #22	ENSCSAG00000017783	SERP2 (ENSCSAG00000017782) #23	TSC22D1 (ENSCSAG00000017781) #24	NUFIP1 (ENSCSAG00000017779) #25	ENSCSAG00000017778 #26	GTF2F2 (ENSCSAG00000017777) #29	KCTD4 (ENSCSAG00000018607) #30	TPT1 (ENSCSAG00000017773) #31	SLC25A30 (ENSCSAG00000017770) #34	COG3 (ENSCSAG00000017769) #35	ERICH6B (ENSCSAG00000017768)	CBY2 (ENSCSAG00000017766) #36	SIAH3 (ENSCSAG00000017765) #37	ZC3H13 (ENSCSAG00000017764)	CPB2 (ENSCSAG00000017762)
Rhinopithecus	ANCESTRAL SPECIES	156								ENSGT00510000047363	ENSGT00940000155104	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003628.b.c.b.a.a.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.n #31	ENSGT00390000006051.a.b.a.b.m.a #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Black snub-nosed monkey	MODERN SPECIES	357											FAM216B (ENSRBIG00000028724) #17	EPSTI1 (ENSRBIG00000029529) #18	DNAJC15 (ENSRBIG00000003484) #19	ENOX1 (ENSRBIG00000031124) #20	CCDC122 (ENSRBIG00000032610) #21	LACC1 (ENSRBIG00000042070) #22	ENSRBIG00000034025	ENSRBIG00000029281	SMIM2 (ENSRBIG00000043447)	SERP2 (ENSRBIG00000036349) #23	TSC22D1 (ENSRBIG00000034232) #24	ENSRBIG00000027001	ENSRBIG00000039378	NUFIP1 (ENSRBIG00000029771) #25	ENSRBIG00000042376 #26	KCTD4 (ENSRBIG00000017539) #30	GTF2F2 (ENSRBIG00000021582) #29	ENSRBIG00000039217 #31	SLC25A30 (ENSRBIG00000018540) #34	COG3 (ENSRBIG00000030800) #35	ERICH6B (ENSRBIG00000029552)
Golden snub-nosed monkey	MODERN SPECIES	1375												EPSTI1 (ENSRROG00000038606) #18	DNAJC15 (ENSRROG00000029776) #19	ENOX1 (ENSRROG00000036718) #20	CCDC122 (ENSRROG00000044730) #21	LACC1 (ENSRROG00000039830) #22	ENSRROG00000033383	SMIM2 (ENSRROG00000038502)	SERP2 (ENSRROG00000021578) #23	ENSRROG00000041382	TSC22D1 (ENSRROG00000003362) #24	ENSRROG00000035710	NUFIP1 (ENSRROG00000040603) #25	ENSRROG00000042419 #26	KCTD4 (ENSRROG00000019203) #30	GTF2F2 (ENSRROG00000031968) #29	ENSRROG00000044525 #31	SLC25A30 (ENSRROG00000032759) #34	COG3 (ENSRROG00000012570) #35	ERICH6B (ENSRROG00000026920)	ENSRROG00000017302
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877.n #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.p #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Cebidae	ANCESTRAL SPECIES	26	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877.m #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.p #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Marmoset	MODERN SPECIES	17	KBTBD6 (ENSCJAG00000017764)	MTRF1 (ENSCJAG00000017739) #9	NAA16 (ENSCJAG00000017696) #10	ENSCJAG00000017692 #11	VWA8 (ENSCJAG00000017682) #12	ENSCJAG00000071641	DGKH (ENSCJAG00000017656) #13	AKAP11 (ENSCJAG00000017644) #14	ENSCJAG00000072205	TNFSF11 (ENSCJAG00000083138) #15	FAM216B (ENSCJAG00000079498) #17	EPSTI1 (ENSCJAG00000017594) #18	ENSCJAG00000071289 #19	ENOX1 (ENSCJAG00000017557) #20	CCDC122 (ENSCJAG00000017551) #21	LACC1 (ENSCJAG00000017549) #22	SMIM2 (ENSCJAG00000017548)	SERP2 (ENSCJAG00000075831) #23	ENSCJAG00000078472	TSC22D1 (ENSCJAG00000019808) #24	ENSCJAG00000072132	ENSCJAG00000070699	NUFIP1 (ENSCJAG00000019195) #25	GPALPP1 (ENSCJAG00000019204)	GTF2F2 (ENSCJAG00000019220) #29	KCTD4 (ENSCJAG00000056150) #30	ENSCJAG00000019229 ##31	ENSCJAG00000080500	SLC25A30 (ENSCJAG00000043939) #34	COG3 (ENSCJAG00000019251) #35	ERICH6B (ENSCJAG00000073347)
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877.m #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00950000183098.b.a.a.a.a	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b.p #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Bolivian squirrel monkey	MODERN SPECIES	106	NAA16 (ENSSBOG00000030176) #10	RGCC (ENSSBOG00000034616) #11	ENSSBOG00000016579	VWA8 (ENSSBOG00000031026) #12	DGKH (ENSSBOG00000019023) #13	AKAP11 (ENSSBOG00000013175) #14	ENSSBOG00000024102	ENSSBOG00000033805	TNFSF11 (ENSSBOG00000027654) #15	FAM216B (ENSSBOG00000028998) #17	ENSSBOG00000031675	EPSTI1 (ENSSBOG00000034834) #18	DNAJC15 (ENSSBOG00000033169) #19	ENOX1 (ENSSBOG00000035177) #20	CCDC122 (ENSSBOG00000024643) #21	LACC1 (ENSSBOG00000032664) #22	SMIM2 (ENSSBOG00000025045)	SERP2 (ENSSBOG00000023986) #23	TSC22D1 (ENSSBOG00000021407) #24	NUFIP1 (ENSSBOG00000028111) #25	ENSSBOG00000021983 #26	KCTD4 (ENSSBOG00000019746) #30	GTF2F2 (ENSSBOG00000019875) #29	ENSSBOG00000031728 #31	SLC25A30 (ENSSBOG00000018296) #34	COG3 (ENSSBOG00000004105) #35	CBY2 (ENSSBOG00000014137) #36	SIAH3 (ENSSBOG00000027355) #37	ZC3H13 (ENSSBOG00000027228)	CPB2 (ENSSBOG00000018312)	LCP1 (ENSSBOG00000022400)
Capuchin	MODERN SPECIES	96	ENSCCAG00000020214	ENSCCAG00000027265	ENSCCAG00000038067	ENSCCAG00000030569	ERBB3 (ENSCCAG00000034488)	DGKH (ENSCCAG00000033754) #13	AKAP11 (ENSCCAG00000021435) #14	ENSCCAG00000031576	ENSCCAG00000031208	TNFSF11 (ENSCCAG00000021412) #15	FAM216B (ENSCCAG00000020670) #17	EPSTI1 (ENSCCAG00000028457) #18	DNAJC15 (ENSCCAG00000032014) #19	ENOX1 (ENSCCAG00000033756) #20	CCDC122 (ENSCCAG00000031193) #21	LACC1 (ENSCCAG00000036612) #22
Mas night monkey	MODERN SPECIES	1367								ENSANAG00000031141	TNFSF11 (ENSANAG00000024735) #15	FAM216B (ENSANAG00000017015) #17	EPSTI1 (ENSANAG00000000461) #18	DNAJC15 (ENSANAG00000025858) #19	ENOX1 (ENSANAG00000031616) #20	ENSANAG00000021025	CCDC122 (ENSANAG00000017897) #21	LACC1 (ENSANAG00000023681) #22
Tarsier	MODERN SPECIES	4511															CCDC122 (ENSTSYG00000011601) #21	LACC1 (ENSTSYG00000001366) #22	SMIM2 (ENSTSYG00000013288)	SERP2 (ENSTSYG00000032729) #23	TSC22D1 (ENSTSYG00000031058) #24
Strepsirrhini	ANCESTRAL SPECIES	27	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Mouse lemur	MODERN SPECIES	4	MTRF1 (ENSMICG00000033131) #9	NAA16 (ENSMICG00000017489) #10	RGCC (ENSMICG00000027653) #11	VWA8 (ENSMICG00000017491) #12	ENSMICG00000030374	ENSMICG00000043956	DGKH (ENSMICG00000017492) #13	AKAP11 (ENSMICG00000027504) #14	TNFSF11 (ENSMICG00000028647) #15	FAM216B (ENSMICG00000007430) #17	EPSTI1 (ENSMICG00000007681) #18	DNAJC15 (ENSMICG00000036429) #19	ENOX1 (ENSMICG00000007704) #20	ENSMICG00000030056	CCDC122 (ENSMICG00000028774) #21	LACC1 (ENSMICG00000030834) #22	ENSMICG00000030472	OR14K1 (ENSMICG00000028758)	OR2G3 (ENSMICG00000047819)	SERP2 (ENSMICG00000047343) #23	TSC22D1 (ENSMICG00000035276) #24	NUFIP1 (ENSMICG00000003419) #25	GPALPP1 (ENSMICG00000003425)	GTF2F2 (ENSMICG00000002021) #29	KCTD4 (ENSMICG00000041487) #30	ENSMICG00000002027 #31	SLC25A30 (ENSMICG00000046357) #34	COG3 (ENSMICG00000002547) #35	CBY2 (ENSMICG00000037001) #36	SIAH3 (ENSMICG00000028829) #37	ZC3H13 (ENSMICG00000014772)
Lemuriformes_a	ANCESTRAL SPECIES	41	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Coquerels sifaka	MODERN SPECIES	87	ELF1 (ENSPCOG00000027239)	ENSPCOG00000028102	KBTBD7 (ENSPCOG00000005378)	MTRF1 (ENSPCOG00000018133) #9	ENSPCOG00000015826	NAA16 (ENSPCOG00000015796) #10	RGCC (ENSPCOG00000020015) #11	VWA8 (ENSPCOG00000014732) #12	DGKH (ENSPCOG00000026563) #13	AKAP11 (ENSPCOG00000024999) #14	TNFSF11 (ENSPCOG00000028435) #15	FAM216B (ENSPCOG00000014171) #17	EPSTI1 (ENSPCOG00000012615) #18	ENOX1 (ENSPCOG00000018853) #20	CCDC122 (ENSPCOG00000009651) #21	LACC1 (ENSPCOG00000006882) #22	SERP2 (ENSPCOG00000015434) #23	TSC22D1 (ENSPCOG00000015247) #24	NUFIP1 (ENSPCOG00000019764) #25	GPALPP1 (ENSPCOG00000019173)	KCTD4 (ENSPCOG00000012732) #30	ENSPCOG00000023373 #29	ENSPCOG00000015914 ##31	SLC25A30 (ENSPCOG00000014493) #34	COG3 (ENSPCOG00000025691) #35	ENSPCOG00000018374	CBY2 (ENSPCOG00000022887) #36	SIAH3 (ENSPCOG00000027003) #37	ENSPCOG00000019766	LCP1 (ENSPCOG00000014545)	LRRC63 (ENSPCOG00000011386)
Greater bamboo lemur	MODERN SPECIES	2692																LACC1 (ENSPSMG00000006587) #22
Bushbaby	MODERN SPECIES	158									DGKH (ENSOGAG00000008503) #13	AKAP11 (ENSOGAG00000030403) #14	TNFSF11 (ENSOGAG00000027132) #15	FAM216B (ENSOGAG00000014610) #17	EPSTI1 (ENSOGAG00000014614) #18	ENOX1 (ENSOGAG00000014627) #20	CCDC122 (ENSOGAG00000011706) #21	LACC1 (ENSOGAG00000011707) #22	SERP2 (ENSOGAG00000012505) #23	TSC22D1 (ENSOGAG00000032902) #24	ENSOGAG00000025883	NUFIP1 (ENSOGAG00000012511) #25	GPALPP1 (ENSOGAG00000012513)	GTF2F2 (ENSOGAG00000012517) #29	ENSOGAG00000031462	KCTD4 (ENSOGAG00000012520) #30	TPT1 (ENSOGAG00000012523) ##31	ENSOGAG00000031453	SLC25A30 (ENSOGAG00000011571) #34	COG3 (ENSOGAG00000016033) #35	ENSOGAG00000016040	CBY2 (ENSOGAG00000029836) #36	SIAH3 (ENSOGAG00000033062) #37
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000000693 #22
Hedgehog	MODERN SPECIES	12636																LACC1 (ENSEEUG00000004751) #22
Common shrew	MODERN SPECIES	5707																LACC1 (ENSSARG00000001831) #22
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Suina	ANCESTRAL SPECIES	29	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Pig	MODERN SPECIES	2	MTRF1 (ENSSSCG00000009436) #9	ENSSSCG00000034029	ENSSSCG00000060529 #10	ENSSSCG00000009435 #10	RGCC (ENSSSCG00000009434) #11	ENSSSCG00000057192	VWA8 (ENSSSCG00000029837) #12	DGKH (ENSSSCG00000009431) #13	AKAP11 (ENSSSCG00000009430) #14	TNFSF11 (ENSSSCG00000052062) #15	FAM216B (ENSSSCG00000009428) #17	EPSTI1 (ENSSSCG00000037572) #18	DNAJC15 (ENSSSCG00000038251) #19	ENOX1 (ENSSSCG00000021818) #20	CCDC122 (ENSSSCG00000009426) #21	LACC1 (ENSSSCG00000009425) #22	SMIM2 (ENSSSCG00000033908)	SERP2 (ENSSSCG00000040405) #23	ENSSSCG00000009422	NUFIP1 (ENSSSCG00000009420) #25	ENSSSCG00000009419 #26	KCTD4 (ENSSSCG00000022868) #30	GTF2F2 (ENSSSCG00000034156) #29	TPT1 (ENSSSCG00000040929) #31	ENSSSCG00000048332	SLC25A30 (ENSSSCG00000062876) #34	COG3 (ENSSSCG00000023738) #35	CBY2 (ENSSSCG00000009417) #36	SIAH3 (ENSSSCG00000038733) #37	ZC3H13 (ENSSSCG00000009414)	CPB2 (ENSSSCG00000009413)
Chacoan peccary	MODERN SPECIES	216	WBP4 (ENSCWAG00000000246) #7	KBTBD6 (ENSCWAG00000000273)	KBTBD7 (ENSCWAG00000000301)	MTRF1 (ENSCWAG00000000321) #9	NAA16 (ENSCWAG00000000371) #10	RGCC (ENSCWAG00000000406) #11	VWA8 (ENSCWAG00000000455) #12	DGKH (ENSCWAG00000000630) #13	AKAP11 (ENSCWAG00000000801) #14	TNFSF11 (ENSCWAG00000000851) #15	FAM216B (ENSCWAG00000000885) #17	EPSTI1 (ENSCWAG00000000924) #18	DNAJC15 (ENSCWAG00000001051) #19	ENOX1 (ENSCWAG00000001073) #20	CCDC122 (ENSCWAG00000001124) #21	LACC1 (ENSCWAG00000001143) #22	ENSCWAG00000001170	SERP2 (ENSCWAG00000001186) #23	TSC22D1 (ENSCWAG00000001219) #24	NUFIP1 (ENSCWAG00000001267) #25	ENSCWAG00000001284 #26	ENSCWAG00000001303	GTF2F2 (ENSCWAG00000001321) #29	KCTD4 (ENSCWAG00000001334) #30	TPT1 (ENSCWAG00000001363) #31	SLC25A30 (ENSCWAG00000001395) #34	COG3 (ENSCWAG00000001427) #35	CBY2 (ENSCWAG00000001489) #36	SIAH3 (ENSCWAG00000001512) #37	ZC3H13 (ENSCWAG00000001530)	CPB2 (ENSCWAG00000001574)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Cetacea	ANCESTRAL SPECIES	20	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000015889.o.b.b	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000015889.o.b.b	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00390000006051.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000015889.o.b.b	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961.e #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Dolphin	MODERN SPECIES	4652															CCDC122 (ENSTTRG00000015953) #21	LACC1 (ENSTTRG00000015947) #22
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00940000154185.g.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000015889.o.b.b	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961.e #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000000378.d.b.fb.b.b	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00940000154185.g.a	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000154194.kb.a	ENSGT00940000158961.e #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Narwhal	MODERN SPECIES	315	ENSMMNG00015021006	KBTBD7 (ENSMMNG00015021016)	MTRF1 (ENSMMNG00015021028) #9	NAA16 (ENSMMNG00015021061) #10	RGCC (ENSMMNG00015021108) #11	VWA8 (ENSMMNG00015021128) #12	DGKH (ENSMMNG00015021180) #13	AKAP11 (ENSMMNG00015021253) #14	TNFSF11 (ENSMMNG00015014578) #15	FAM216B (ENSMMNG00015014608) #17	EPSTI1 (ENSMMNG00015014629) #18	ENSMMNG00015014636 #19	ENSMMNG00015014643	ENOX1 (ENSMMNG00015014653) #20	CCDC122 (ENSMMNG00015014672) #21	LACC1 (ENSMMNG00015014682) #22	SERP2 (ENSMMNG00015014783) #23	TSC22D1 (ENSMMNG00015014797) #24	NUFIP1 (ENSMMNG00015014826) #25	ENSMMNG00015014855 #26	GTF2F2 (ENSMMNG00015014875) #29	KCTD4 (ENSMMNG00015014888) #30	ENSMMNG00015014913 ##31	ENSMMNG00015014942	ENSMMNG00015014952 #34	COG3 (ENSMMNG00015014965) #35	CBY2 (ENSMMNG00015014993) #36	SIAH3 (ENSMMNG00015015004) #37	ZC3H13 (ENSMMNG00015015021)	CPB2 (ENSMMNG00015015086)	LCP1 (ENSMMNG00015015119)
Beluga whale	MODERN SPECIES	29	WBP4 (ENSDLEG00000007369) #7	KBTBD6 (ENSDLEG00000007365)	KBTBD7 (ENSDLEG00000007360)	NAA16 (ENSDLEG00000007348) #10	RGCC (ENSDLEG00000007344) #11	VWA8 (ENSDLEG00000007291) #12	DGKH (ENSDLEG00000007260) #13	AKAP11 (ENSDLEG00000007242) #14	TNFSF11 (ENSDLEG00000007228) #15	FAM216B (ENSDLEG00000007217) #17	EPSTI1 (ENSDLEG00000007205) #18	DNAJC15 (ENSDLEG00000007194) #19	ENSDLEG00000007189	ENOX1 (ENSDLEG00000007152) #20	CCDC122 (ENSDLEG00000007128) #21	LACC1 (ENSDLEG00000007121) #22	ENSDLEG00000007116 #23	TSC22D1 (ENSDLEG00000007106) #24	ENSDLEG00000007097	NUFIP1 (ENSDLEG00000007090) #25	GPALPP1 (ENSDLEG00000007086) #26	KCTD4 (ENSDLEG00000007081) #30	GTF2F2 (ENSDLEG00000007077) #29	ENSDLEG00000007063 ##31	ENSDLEG00000007053	SLC25A30 (ENSDLEG00000006823) #35	CBY2 (ENSDLEG00000006765) #36	SIAH3 (ENSDLEG00000006761) #37	ZC3H13 (ENSDLEG00000006744)	CPB2 (ENSDLEG00000006697)	LCP1 (ENSDLEG00000006675)
Vaquita	MODERN SPECIES	9	WBP4 (ENSPSNG00000017925) #7	KBTBD6 (ENSPSNG00000017912)	KBTBD7 (ENSPSNG00000017892)	MTRF1 (ENSPSNG00000017841) #9	NAA16 (ENSPSNG00000017764) #10	RGCC (ENSPSNG00000017723) #11	VWA8 (ENSPSNG00000016031) #12	DGKH (ENSPSNG00000015456) #13	AKAP11 (ENSPSNG00000015306) #14	TNFSF11 (ENSPSNG00000015104) #15	FAM216B (ENSPSNG00000015047) #17	EPSTI1 (ENSPSNG00000014964) #18	DNAJC15 (ENSPSNG00000014922) #19	ENOX1 (ENSPSNG00000014858) #20	CCDC122 (ENSPSNG00000014762) #21	LACC1 (ENSPSNG00000014708) #22	SERP2 (ENSPSNG00000014487) #23	TSC22D1 (ENSPSNG00000014372) #24	ENSPSNG00000014291	NUFIP1 (ENSPSNG00000014196) #25	ENSPSNG00000014046 #26	ENSPSNG00000014019	KCTD4 (ENSPSNG00000013990) #30	GTF2F2 (ENSPSNG00000013930) #29	ENSPSNG00000013707 ##31	ENSPSNG00000013603	ENSPSNG00000013532 #34	COG3 (ENSPSNG00000013423) #35	CBY2 (ENSPSNG00000013325) #36	SIAH3 (ENSPSNG00000013279) #37	ZC3H13 (ENSPSNG00000013177)
Sperm whale	MODERN SPECIES	4	ENSPCTG00005005579	KBTBD7 (ENSPCTG00005005568)	MTRF1 (ENSPCTG00005005513) #9	NAA16 (ENSPCTG00005005364) #10	RGCC (ENSPCTG00005005316) #11	VWA8 (ENSPCTG00005005091) #12	DGKH (ENSPCTG00005004470) #13	AKAP11 (ENSPCTG00005004282) #14	TNFSF11 (ENSPCTG00005004229) #15	ENSPCTG00005004218	FAM216B (ENSPCTG00005004201) #17	EPSTI1 (ENSPCTG00005004170) #18	DNAJC15 (ENSPCTG00005004158) #19	ENOX1 (ENSPCTG00005020727) #20	CCDC122 (ENSPCTG00005020708) #21	LACC1 (ENSPCTG00005020691) #22	SERP2 (ENSPCTG00005020663) #23	TSC22D1 (ENSPCTG00005020590) #24	ENSPCTG00005020454	NUFIP1 (ENSPCTG00005020401) #25	GPALPP1 (ENSPCTG00005020323) #26	ENSPCTG00005020258	KCTD4 (ENSPCTG00005020248) #30	GTF2F2 (ENSPCTG00005020225) #29	TPT1 (ENSPCTG00005020016) ##31	SLC25A30 (ENSPCTG00005019936) #34	COG3 (ENSPCTG00005019832) #35	CBY2 (ENSPCTG00005019720) #36	SIAH3 (ENSPCTG00005019682) #37	ZC3H13 (ENSPCTG00005019642)	CPB2 (ENSPCTG00005019480)
Blue whale	MODERN SPECIES	9	KBTBD7 (ENSBMSG00010017778)	MTRF1 (ENSBMSG00010017736) #9	NAA16 (ENSBMSG00010017707) #10	RGCC (ENSBMSG00010017667) #11	VWA8 (ENSBMSG00010017626) #12	DGKH (ENSBMSG00010017429) #13	AKAP11 (ENSBMSG00010017386) #14	TNFSF11 (ENSBMSG00010017289) #15	FAM216B (ENSBMSG00010017267) #17	EPSTI1 (ENSBMSG00010017177) #18	ENSBMSG00010017150	ENSBMSG00010017116 #19	ENSBMSG00010017093	ENOX1 (ENSBMSG00010017029) #20	ENSBMSG00010017009 #21	LACC1 (ENSBMSG00010016991) #22	SMIM2 (ENSBMSG00010016954)	SERP2 (ENSBMSG00010016922) #23	TSC22D1 (ENSBMSG00010016870) #24	NUFIP1 (ENSBMSG00010016807) #25	ENSBMSG00010016755 #26	ENSBMSG00010016736	KCTD4 (ENSBMSG00010016717) #30	GTF2F2 (ENSBMSG00010016687) #29	ENSBMSG00010016609 ##31	SLC25A30 (ENSBMSG00010016571) #34	COG3 (ENSBMSG00010016549) #35	CBY2 (ENSBMSG00010016528) #36	SIAH3 (ENSBMSG00010016505) #37	ENSBMSG00010016462	CPB2 (ENSBMSG00010016357)
Pecora	ANCESTRAL SPECIES	23	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Yarkand deer	MODERN SPECIES	23	MTRF1 (ENSCHYG00000017123) #9	NAA16 (ENSCHYG00000017247) #10	ENSCHYG00000018532	ENSCHYG00000018580 #11	ENSCHYG00000018641	VWA8 (ENSCHYG00000018691) #12	DGKH (ENSCHYG00000019526) #13	ENSCHYG00000020537	AKAP11 (ENSCHYG00000020568) #14	TNFSF11 (ENSCHYG00000020756) #15	FAM216B (ENSCHYG00000020887) #17	EPSTI1 (ENSCHYG00000020957) #18	DNAJC15 (ENSCHYG00000021166) #19	ENOX1 (ENSCHYG00000021225) #20	CCDC122 (ENSCHYG00000021466) #21	LACC1 (ENSCHYG00000021511) #22	SERP2 (ENSCHYG00000021664) #23	TSC22D1 (ENSCHYG00000021718) #24	NUFIP1 (ENSCHYG00000021831) #25	ENSCHYG00000021950 #26	GTF2F2 (ENSCHYG00000022073) #29	KCTD4 (ENSCHYG00000022134) #30	ENSCHYG00000022164	ENSCHYG00000022199 ##31	SLC25A30 (ENSCHYG00000022376) #34	COG3 (ENSCHYG00000022568) #35	CBY2 (ENSCHYG00000022728) #36	SIAH3 (ENSCHYG00000022790) #37	ZC3H13 (ENSCHYG00000022834)	CPB2 (ENSCHYG00000023124)	LCP1 (ENSCHYG00000023302)
Percora_a	ANCESTRAL SPECIES	25	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Bovidae	ANCESTRAL SPECIES	25	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Caprinae	ANCESTRAL SPECIES	37	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Rambouillet Sheep	MODERN SPECIES	1	KBTBD6 (ENSOARG00020005273)	KBTBD7 (ENSOARG00020005282)	MTRF1 (ENSOARG00020005295) #9	NAA16 (ENSOARG00020005343) #10	RGCC (ENSOARG00020005649) #11	VWA8 (ENSOARG00020005673) #12	DGKH (ENSOARG00020005790) #13	AKAP11 (ENSOARG00020006005) #14	TNFSF11 (ENSOARG00020006031) #15	FAM216B (ENSOARG00020006081) #17	EPSTI1 (ENSOARG00020006110) #18	ENSOARG00020006129 #19	ENOX1 (ENSOARG00020006161) #20	ENSOARG00020006192	CCDC122 (ENSOARG00020006216) #21	LACC1 (ENSOARG00020006292) #22	SERP2 (ENSOARG00020006397) #23	NUFIP1 (ENSOARG00020006417) #25	ENSOARG00020006616 #26	GTF2F2 (ENSOARG00020006761) #29	KCTD4 (ENSOARG00020006798) #30	TPT1 (ENSOARG00020006843) ##31	SLC25A30 (ENSOARG00020007017) #35	ENSOARG00020007819	CBY2 (ENSOARG00020007846) #36	ZC3H13 (ENSOARG00020007937)	CPB2 (ENSOARG00020008064)	ENSOARG00020008359	LRRC63 (ENSOARG00020008408)	RUBCNL (ENSOARG00020008494)	LRCH1 (ENSOARG00020008711)
Goat	MODERN SPECIES	3	KBTBD6 (ENSCHIG00000008480)	KBTBD7 (ENSCHIG00000008970)	MTRF1 (ENSCHIG00000011810) #9	NAA16 (ENSCHIG00000020957) #10	RGCC (ENSCHIG00000021125) #11	VWA8 (ENSCHIG00000014923) #12	DGKH (ENSCHIG00000006200) #13	AKAP11 (ENSCHIG00000013636) #14	TNFSF11 (ENSCHIG00000015014) #15	FAM216B (ENSCHIG00000024226) #17	EPSTI1 (ENSCHIG00000023487) #18	DNAJC15 (ENSCHIG00000024974) #19	ENSCHIG00000017754	ENOX1 (ENSCHIG00000021948) #20	CCDC122 (ENSCHIG00000005141) #21	LACC1 (ENSCHIG00000023585) #22	SERP2 (ENSCHIG00000017254) #23	TSC22D1 (ENSCHIG00000012362) #24	NUFIP1 (ENSCHIG00000006835) #25	ENSCHIG00000017887 #26	KCTD4 (ENSCHIG00000006271) #30	GTF2F2 (ENSCHIG00000027081) #29	ENSCHIG00000014215 ##31	ENSCHIG00000013965 #34	ENSCHIG00000012507	COG3 (ENSCHIG00000021605) #35	ENSCHIG00000022128	CBY2 (ENSCHIG00000006466) #36	SIAH3 (ENSCHIG00000022671) #37	ZC3H13 (ENSCHIG00000020072)	CPB2 (ENSCHIG00000016819)
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000017955.c.d.b	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00390000006051.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Bos	ANCESTRAL SPECIES	22	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601.i #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000017955.c.d.b	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00390000006051.a.a.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36
Bos_a	ANCESTRAL SPECIES	55	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00550000076230	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601.i #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000017955.c.d.b	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Wild yak	MODERN SPECIES	780														ENOX1 (ENSBMUG00000007790) #20	CCDC122 (ENSBMUG00000007806) #21	LACC1 (ENSBMUG00000007815) #22	SMIM2 (ENSBMUG00000007820)	SERP2 (ENSBMUG00000007835) #23	TSC22D1 (ENSBMUG00000007849) #24	NUFIP1 (ENSBMUG00000007872) #25	ENSBMUG00000007885 #26	ENSBMUG00000007897
Domestic yak	MODERN SPECIES	6	KBTBD7 (ENSBGRG00000006036)	MTRF1 (ENSBGRG00000006009) #9	NAA16 (ENSBGRG00000005856) #10	RGCC (ENSBGRG00000005828) #11	VWA8 (ENSBGRG00000005506) #12	ENSBGRG00000005473	DGKH (ENSBGRG00000005383) #13	AKAP11 (ENSBGRG00000005093) #14	TNFSF11 (ENSBGRG00000005035) #15	FAM216B (ENSBGRG00000004982) #17	EPSTI1 (ENSBGRG00000004611) #18	DNAJC15 (ENSBGRG00000004544) #19	ENSBGRG00000004533	ENOX1 (ENSBGRG00000004490) #20	CCDC122 (ENSBGRG00000004429) #21	LACC1 (ENSBGRG00000004396) #22	SMIM2 (ENSBGRG00000004347)	ENSBGRG00000004322 #23	TSC22D1 (ENSBGRG00000004147) #24	ENSBGRG00000004099	NUFIP1 (ENSBGRG00000004055) #25	ENSBGRG00000003939 #26	ENSBGRG00000003862	KCTD4 (ENSBGRG00000003842) #30	GTF2F2 (ENSBGRG00000003757) #29	ENSBGRG00000023216 ##31	ENSBGRG00000023179	SLC25A30 (ENSBGRG00000023058) #34	COG3 (ENSBGRG00000022627) #35	CBY2 (ENSBGRG00000022527) #36	SIAH3 (ENSBGRG00000022492) #37
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601.i #12	ENSGT00940000164406	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000017955.c.d.b	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a.a.a ##31	ENSGT00390000006051.a.a.a.b.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Hybrid Bos Indicus	MODERN SPECIES	3	NAA16 (ENSBIXG00005024029) #10	ENSBIXG00005023942	ENSBIXG00005006058 #11	VWA8 (ENSBIXG00005023867) #12	ENSBIXG00005006905	DGKH (ENSBIXG00005023801) #13	AKAP11 (ENSBIXG00005023417) #14	TNFSF11 (ENSBIXG00005004003) #15	FAM216B (ENSBIXG00005023313) #17	EPSTI1 (ENSBIXG00005003975) #18	DNAJC15 (ENSBIXG00005023206) #19	ENSBIXG00005023187	ENOX1 (ENSBIXG00005023147) #20	ENSBIXG00005023104	CCDC122 (ENSBIXG00005003936) #21	LACC1 (ENSBIXG00005023079) #22	SMIM2 (ENSBIXG00005003927)	ENSBIXG00005023019	ENSBIXG00005022931 #23	TSC22D1 (ENSBIXG00005022881) #24	NUFIP1 (ENSBIXG00005022767) #25	ENSBIXG00005022737 #26	ENSBIXG00005022705	GTF2F2 (ENSBIXG00005003886) #29	KCTD4 (ENSBIXG00005003883) #30	ENSBIXG00005007690 ##31	COG3 (ENSBIXG00005022513) #35	ENSBIXG00005022372	CBY2 (ENSBIXG00005022348) #36	SIAH3 (ENSBIXG00005003804) #37	ZC3H13 (ENSBIXG00005022307)
Cow	MODERN SPECIES	3	KBTBD6 (ENSBTAG00000008656)	KBTBD7 (ENSBTAG00000039823)	NAA16 (ENSBTAG00000038251) #10	ENSBTAG00000052870	RGCC (ENSBTAG00000034885) #11	VWA8 (ENSBTAG00000001133) #12	ENSBTAG00000053271	DGKH (ENSBTAG00000013879) #13	AKAP11 (ENSBTAG00000014752) #14	TNFSF11 (ENSBTAG00000008924) #15	FAM216B (ENSBTAG00000003595) #17	EPSTI1 (ENSBTAG00000019054) #18	DNAJC15 (ENSBTAG00000034785) #19	ENOX1 (ENSBTAG00000012434) #20	CCDC122 (ENSBTAG00000034753) #21	LACC1 (ENSBTAG00000016691) #22	SERP2 (ENSBTAG00000051524) #23	TSC22D1 (ENSBTAG00000047739)	TSC22D1 (ENSBTAG00000046664) #24	NUFIP1 (ENSBTAG00000009415) #25	GPALPP1 (ENSBTAG00000009416) #26	ENSBTAG00000045689	GTF2F2 (ENSBTAG00000034495) #29	KCTD4 (ENSBTAG00000019416) #30	TPT1 (ENSBTAG00000010156) ##31	SLC25A30 (ENSBTAG00000016529) #34	COG3 (ENSBTAG00000017907) #35	CBY2 (ENSBTAG00000018580) #36	SIAH3 (ENSBTAG00000051729) #37	ZC3H13 (ENSBTAG00000007067)	ENSBTAG00000048402
American bison	MODERN SPECIES	3259							ENSBBBG00000008639 #12	DGKH (ENSBBBG00000008810) #13	AKAP11 (ENSBBBG00000006197) #14	TNFSF11 (ENSBBBG00000023782) #15	FAM216B (ENSBBBG00000023767) #17	EPSTI1 (ENSBBBG00000023757) #18	DNAJC15 (ENSBBBG00000023717) #19	ENOX1 (ENSBBBG00000023702) #20	CCDC122 (ENSBBBG00000023682) #21	LACC1 (ENSBBBG00000023676) #22	SMIM2 (ENSBBBG00000023658)	SERP2 (ENSBBBG00000023651) #23	TSC22D1 (ENSBBBG00000023640) #24	NUFIP1 (ENSBBBG00000023623) #25	GPALPP1 (ENSBBBG00000023609)	ENSBBBG00000023577	GTF2F2 (ENSBBBG00000006155) #29	KCTD4 (ENSBBBG00000023540) #30	ENSBBBG00000023536 ##31	ENSBBBG00000006147 #34	ENSBBBG00000023504	COG3 (ENSBBBG00000006139) #35	CBY2 (ENSBBBG00000023425) #36	SIAH3 (ENSBBBG00000023409) #37	ZC3H13 (ENSBBBG00000023395)
Siberian musk deer	MODERN SPECIES	18										TNFSF11 (ENSMMSG00000020387) #15	FAM216B (ENSMMSG00000020436) #17	EPSTI1 (ENSMMSG00000020457) #18	DNAJC15 (ENSMMSG00000020566) #19	ENOX1 (ENSMMSG00000020590) #20	CCDC122 (ENSMMSG00000020615) #21	LACC1 (ENSMMSG00000020655) #22	SMIM2 (ENSMMSG00000020679)	SERP2 (ENSMMSG00000012621) #23	TSC22D1 (ENSMMSG00000012637) #24	NUFIP1 (ENSMMSG00000012687) #25	ENSMMSG00000012733 #26	GTF2F2 (ENSMMSG00000012809) #29	KCTD4 (ENSMMSG00000012832) #30	ENSMMSG00000012847 ##31	COG3 (ENSMMSG00000012900) #35	CBY2 (ENSMMSG00000013010) #36	SIAH3 (ENSMMSG00000013046) #37	ZC3H13 (ENSMMSG00000013066)	CPB2 (ENSMMSG00000013091)	ENSMMSG00000013171	LRRC63 (ENSMMSG00000013232)
Camelidae	ANCESTRAL SPECIES	14	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.a.a.a ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Alpaca	MODERN SPECIES	1140															CCDC122 (ENSVPAG00000005259) #21	LACC1 (ENSVPAG00000005261) #22	ENSVPAG00000005265 #24
Arabian camel	MODERN SPECIES	5	WBP4 (ENSCDRG00005011462) #7	KBTBD6 (ENSCDRG00005011423)	KBTBD7 (ENSCDRG00005011400)	MTRF1 (ENSCDRG00005011325) #9	NAA16 (ENSCDRG00005010901) #10	RGCC (ENSCDRG00005010786) #11	VWA8 (ENSCDRG00005010578) #12	DGKH (ENSCDRG00005009915) #13	AKAP11 (ENSCDRG00005009691) #14	TNFSF11 (ENSCDRG00005009599) #15	FAM216B (ENSCDRG00005009565) #17	EPSTI1 (ENSCDRG00005009378) #18	DNAJC15 (ENSCDRG00005009304) #19	ENOX1 (ENSCDRG00005009033) #20	CCDC122 (ENSCDRG00005008954) #21	LACC1 (ENSCDRG00005008895) #22	ENSCDRG00005008695 #23	TSC22D1 (ENSCDRG00005008565) #24	NUFIP1 (ENSCDRG00005008479) #25	ENSCDRG00005008379 #26	KCTD4 (ENSCDRG00005008352) #30	GTF2F2 (ENSCDRG00005008284) #29	ENSCDRG00005007988 ##31	SLC25A30 (ENSCDRG00005007895) #34	COG3 (ENSCDRG00005007804) #35	CBY2 (ENSCDRG00005007695) #36	SIAH3 (ENSCDRG00005007643) #37	ZC3H13 (ENSCDRG00005007587)	CPB2 (ENSCDRG00005007487)	LCP1 (ENSCDRG00005007408)	LRRC63 (ENSCDRG00005007325)
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Carnivora	ANCESTRAL SPECIES	23	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Caniformia	ANCESTRAL SPECIES	24	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a ##31	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Ursidae	ANCESTRAL SPECIES	27	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a ##31	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Ursus	ANCESTRAL SPECIES	62	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.a ##31	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
American black bear	MODERN SPECIES	3411															CCDC122 (ENSUAMG00000001373) #21	LACC1 (ENSUAMG00000001363) #22
Polar bear	MODERN SPECIES	297	KBTBD6 (ENSUMAG00000014753)	KBTBD7 (ENSUMAG00000014764)	MTRF1 (ENSUMAG00000014772) #9	NAA16 (ENSUMAG00000014778) #10	ENSUMAG00000014782 #11	VWA8 (ENSUMAG00000014915) #12	DGKH (ENSUMAG00000015512) #13	AKAP11 (ENSUMAG00000015963) #14	TNFSF11 (ENSUMAG00000015977) #15	FAM216B (ENSUMAG00000015984) #17	EPSTI1 (ENSUMAG00000016009) #18	ENSUMAG00000016020	DNAJC15 (ENSUMAG00000016026) #19	ENOX1 (ENSUMAG00000016041) #20	CCDC122 (ENSUMAG00000016081) #21	LACC1 (ENSUMAG00000016088) #22	ENSUMAG00000016116	TSC22D1 (ENSUMAG00000016120) #24	NUFIP1 (ENSUMAG00000016131) #25	ENSUMAG00000016137 #26	ENSUMAG00000016139	GTF2F2 (ENSUMAG00000016150) #29	KCTD4 (ENSUMAG00000016155) #30	ENSUMAG00000016169 ##31	SLC25A30 (ENSUMAG00000016178) #34	COG3 (ENSUMAG00000016186) #35	CBY2 (ENSUMAG00000016197) #36	SIAH3 (ENSUMAG00000016203) #37	ZC3H13 (ENSUMAG00000016220)	CPB2 (ENSUMAG00000016276)	LCP1 (ENSUMAG00000016365)
Giant Panda	MODERN SPECIES	17	WBP4 (ENSAMEG00000008668) #7	KBTBD6 (ENSAMEG00000018925)	KBTBD7 (ENSAMEG00000018934)	MTRF1 (ENSAMEG00000008696) #9	NAA16 (ENSAMEG00000008721) #10	RGCC (ENSAMEG00000023477) #11	VWA8 (ENSAMEG00000008732) #12	DGKH (ENSAMEG00000008800) #13	AKAP11 (ENSAMEG00000008857) #14	ENSAMEG00000023893 #15	FAM216B (ENSAMEG00000024062) #17	EPSTI1 (ENSAMEG00000016302) #18	DNAJC15 (ENSAMEG00000027146) #19	ENOX1 (ENSAMEG00000017297) #20	CCDC122 (ENSAMEG00000012979) #21	LACC1 (ENSAMEG00000012983) #22	SERP2 (ENSAMEG00000026998) #23	TSC22D1 (ENSAMEG00000012987) #24	NUFIP1 (ENSAMEG00000012993) #25	ENSAMEG00000013001 #26	KCTD4 (ENSAMEG00000018914) #30	GTF2F2 (ENSAMEG00000013015) #29	ENSAMEG00000013022 #31	ENSAMEG00000026990 #34	COG3 (ENSAMEG00000013072) #35	CBY2 (ENSAMEG00000030920) #36	SIAH3 (ENSAMEG00000013115) #37	ZC3H13 (ENSAMEG00000013117)	CPB2 (ENSAMEG00000013144)	LCP1 (ENSAMEG00000013186)	LRRC63 (ENSAMEG00000013282)
Mustelinae	ANCESTRAL SPECIES	71	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682.e #35	ENSGT00940000153655.A.a	ENSGT00390000015682.f #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
American mink	MODERN SPECIES	193	KBTBD6 (ENSNVIG00000001665)	KBTBD7 (ENSNVIG00000001658)	RF1M (ENSNVIG00000001641) #9	ENSNVIG00000001628	NAA16 (ENSNVIG00000001540) #10	RGCC (ENSNVIG00000001512) #11	VWA8 (ENSNVIG00000001438) #12	DGKH (ENSNVIG00000001217) #13	AKAP11 (ENSNVIG00000001185) #14	TNFSF11 (ENSNVIG00000001142) #15	FAM216B (ENSNVIG00000001108) #17	EPSTI1 (ENSNVIG00000001071) #18	DNAJC15 (ENSNVIG00000001037) #19	ENOX1 (ENSNVIG00000001013) #20	CCDC122 (ENSNVIG00000001005) #21	LACC1 (ENSNVIG00000000984) #22	SERP2 (ENSNVIG00000000979) #23	TSC22D1 (ENSNVIG00000000959) #24	NUFIP1 (ENSNVIG00000000949) #25	K1704 (ENSNVIG00000000905) #26	KCTD4 (ENSNVIG00000000903) #30	T2FB (ENSNVIG00000000891) #29	ENSNVIG00000000887	TPT1 (ENSNVIG00000000842) #31	SLC25A30 (ENSNVIG00000000825) #34	ENSNVIG00000000823 #35
Ferret	MODERN SPECIES	232	KBTBD7 (ENSMPUG00000001878)	MTRF1 (ENSMPUG00000001874) #9	NAA16 (ENSMPUG00000001871) #10	RGCC (ENSMPUG00000001865) #11	VWA8 (ENSMPUG00000001847) #12	ENSMPUG00000001845	DGKH (ENSMPUG00000001760) #13	AKAP11 (ENSMPUG00000001756) #14	ENSMPUG00000001755	TNFSF11 (ENSMPUG00000001717) #15	FAM216B (ENSMPUG00000001713) #17	EPSTI1 (ENSMPUG00000001709) #18	DNAJC15 (ENSMPUG00000001704) #19	ENOX1 (ENSMPUG00000001695) #20	CCDC122 (ENSMPUG00000001686) #21	LACC1 (ENSMPUG00000001681) #22	SERP2 (ENSMPUG00000001672) #23	ENSMPUG00000001671	TSC22D1 (ENSMPUG00000001669) #24	ENSMPUG00000001666	NUFIP1 (ENSMPUG00000001659) #25	ENSMPUG00000001655 #26	KCTD4 (ENSMPUG00000019413) #30	GTF2F2 (ENSMPUG00000001647) #29	TPT1 (ENSMPUG00000001640) #31	SLC25A30 (ENSMPUG00000001635) #34	COG3 (ENSMPUG00000001626) #35	ENSMPUG00000001620	CBY2 (ENSMPUG00000001615) #36	SIAH3 (ENSMPUG00000001611) #37	ZC3H13 (ENSMPUG00000001602)
Canidae	ANCESTRAL SPECIES	38	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Canis_lupus	ANCESTRAL SPECIES	35	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000154205.h.wc.b	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B.fb.b #24	ENSGT00940000163647	ENSGT00940000159144.B.gb #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j.c #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Dog	MODERN SPECIES	14	KBTBD6 (ENSCAFG00845012777)	ENSCAFG00845012746	MTRF1 (ENSCAFG00845012616) #9	NAA16 (ENSCAFG00845012159) #10	RGCC (ENSCAFG00845012012) #11	VWA8 (ENSCAFG00845011611) #12	ENSCAFG00845011514	DGKH (ENSCAFG00845010984) #13	AKAP11 (ENSCAFG00845010732) #14	TNFSF11 (ENSCAFG00845010618) #15	FAM216B (ENSCAFG00845010557) #17	ENSCAFG00845010306 #18	DNAJC15 (ENSCAFG00845010203) #19	ENOX1 (ENSCAFG00845010105) #20	CCDC122 (ENSCAFG00845010070) #21	LACC1 (ENSCAFG00845010010) #22	SMIM2 (ENSCAFG00845009884)	SERP2 (ENSCAFG00845009825) #23	TSC22D1 (ENSCAFG00845009733) #24	NUFIP1 (ENSCAFG00845009615) #25	ENSCAFG00845009469 #26	KCTD4 (ENSCAFG00845009422) #30	GTF2F2 (ENSCAFG00845009386) #29	TPT1 (ENSCAFG00845009258) #31	ENSCAFG00845009121 #34	COG3 (ENSCAFG00845008880) #35	ERICH6B (ENSCAFG00845008814)	CBY2 (ENSCAFG00845008753) #36	SIAH3 (ENSCAFG00845008706) #37	ZC3H13 (ENSCAFG00845008518)	CPB2 (ENSCAFG00845008419)
Dingo	MODERN SPECIES	7	ENSCAFG00020018176	MTRF1 (ENSCAFG00020018178) #9	ENSCAFG00020018183 #10	ENSCAFG00020018184 #10	RGCC (ENSCAFG00020018187) #11	VWA8 (ENSCAFG00020018227) #12	ENSCAFG00020018598	DGKH (ENSCAFG00020018605) #13	AKAP11 (ENSCAFG00020018682) #14	TNFSF11 (ENSCAFG00020018702) #15	FAM216B (ENSCAFG00020018715) #17	ENSCAFG00020018717 #18	DNAJC15 (ENSCAFG00020018719) #19	ENOX1 (ENSCAFG00020018723) #20	CCDC122 (ENSCAFG00020018762) #21	LACC1 (ENSCAFG00020018765) #22	SERP2 (ENSCAFG00020018773) #23	ENSCAFG00020018774	TSC22D1 (ENSCAFG00020018776) #24	NUFIP1 (ENSCAFG00020018778) #25	ENSCAFG00020018779 #26	ENSCAFG00020018789 #29	KCTD4 (ENSCAFG00020018796) #30	TPT1 (ENSCAFG00020018805) #31	SLC25A30 (ENSCAFG00020018818) #34	COG3 (ENSCAFG00020018851) #35	CBY2 (ENSCAFG00020019257) #36	SIAH3 (ENSCAFG00020019260) #37	ZC3H13 (ENSCAFG00020019269)	CPB2 (ENSCAFG00020019340)	LCP1 (ENSCAFG00020019359)
Red fox	MODERN SPECIES	133															CCDC122 (ENSVVUG00000028479) #21	LACC1 (ENSVVUG00000028475) #22	ENSVVUG00000028460	ENSVVUG00000028452	TSC22D1 (ENSVVUG00000028449)	TSC22D1 (ENSVVUG00000028447) #24	NUFIP1 (ENSVVUG00000028438) #25	GPALPP1 (ENSVVUG00000028432) #26	KCTD4 (ENSVVUG00000028428) #30	GTF2F2 (ENSVVUG00000028424) #29	TPT1 (ENSVVUG00000028420) #31	SLC25A30 (ENSVVUG00000028417) #34	COG3 (ENSVVUG00000028413) #35	ENSVVUG00000028408	CBY2 (ENSVVUG00000028403) #36	SIAH3 (ENSVVUG00000028402) #37	ZC3H13 (ENSVVUG00000028395)
Felidae	ANCESTRAL SPECIES	23	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000016988.a.a.a.b.a.b.a.a	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Panthera	ANCESTRAL SPECIES	21	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000006696.db	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000016988.a.a.a.b.a.b.a.a	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Tiger	MODERN SPECIES	221	WBP4 (ENSPTIG00000003187) #7	KBTBD7 (ENSPTIG00000005920)	MTRF1 (ENSPTIG00000006673) #9	NAA16 (ENSPTIG00000007921) #10	ENSPTIG00000005941	VWA8 (ENSPTIG00000011005) #12	DGKH (ENSPTIG00000016136) #13	AKAP11 (ENSPTIG00000004721) #14	TNFSF11 (ENSPTIG00000007595) #15	FAM216B (ENSPTIG00000010708) #17	EPSTI1 (ENSPTIG00000011254) #18	DNAJC15 (ENSPTIG00000013715) #19	ENOX1 (ENSPTIG00000014489) #20	ENSPTIG00000006302	CCDC122 (ENSPTIG00000015450) #21	LACC1 (ENSPTIG00000016230) #22	SERP2 (ENSPTIG00000017877) #23	ENSPTIG00000018215	ENSPTIG00000019134	ENSPTIG00000019578	NUFIP1 (ENSPTIG00000020246) #25	GPALPP1 (ENSPTIG00000020901)	ENSPTIG00000005441 #29	KCTD4 (ENSPTIG00000006409) #30	TPT1 (ENSPTIG00000006407) #31	SLC25A30 (ENSPTIG00000009381) #34	COG3 (ENSPTIG00000010467) #35	CBY2 (ENSPTIG00000013046) #36	SIAH3 (ENSPTIG00000014752) #37	ZC3H13 (ENSPTIG00000014867)	CPB2 (ENSPTIG00000018397)
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00550000076230	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000006696.db	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000016988.a.a.a.b.a.b.a.a	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
leopard	MODERN SPECIES	14	MTRF1 (ENSPPRG00000009511) #9	NAA16 (ENSPPRG00000008553) #10	ENSPPRG00000017124	ENSPPRG00000017108	RGCC (ENSPPRG00000007126) #11	VWA8 (ENSPPRG00000006962) #12	DGKH (ENSPPRG00000003603) #13	AKAP11 (ENSPPRG00000000675) #14	TNFSF11 (ENSPPRG00000000387) #15	FAM216B (ENSPPRG00000022155) #17	EPSTI1 (ENSPPRG00000020685) #18	DNAJC15 (ENSPPRG00000017077) #19	ENOX1 (ENSPPRG00000016584) #20	ENSPPRG00000016466	CCDC122 (ENSPPRG00000014639) #21	LACC1 (ENSPPRG00000014453) #22	SERP2 (ENSPPRG00000013094) #23	TSC22D1 (ENSPPRG00000015050) #24	ENSPPRG00000012925	NUFIP1 (ENSPPRG00000012625) #25	GPALPP1 (ENSPPRG00000011209)	GTF2F2 (ENSPPRG00000009586) #29	KCTD4 (ENSPPRG00000016150) #30	TPT1 (ENSPPRG00000009372) #31	SLC25A30 (ENSPPRG00000007929) #34	ENSPPRG00000007684	COG3 (ENSPPRG00000006884) #35	CBY2 (ENSPPRG00000006138) #36	SIAH3 (ENSPPRG00000005707) #37	ZC3H13 (ENSPPRG00000005440)	CPB2 (ENSPPRG00000003962)
lion	MODERN SPECIES	1	KBTBD6 (ENSPLOG00000012750)	KBTBD7 (ENSPLOG00000012777)	MTRF1 (ENSPLOG00000012808) #9	NAA16 (ENSPLOG00000013005) #10	RGCC (ENSPLOG00000013395) #11	VWA8 (ENSPLOG00000013476) #12	DGKH (ENSPLOG00000013638) #13	AKAP11 (ENSPLOG00000013869) #14	TNFSF11 (ENSPLOG00000013952) #15	FAM216B (ENSPLOG00000014067) #17	EPSTI1 (ENSPLOG00000014127) #18	DNAJC15 (ENSPLOG00000014175) #19	ENOX1 (ENSPLOG00000014204) #20	ENSPLOG00000014335	CCDC122 (ENSPLOG00000014352) #21	LACC1 (ENSPLOG00000014380) #22	SERP2 (ENSPLOG00000014453) #23	TSC22D1 (ENSPLOG00000014492) #24	ENSPLOG00000014565	NUFIP1 (ENSPLOG00000014594) #25	GPALPP1 (ENSPLOG00000014632)	ENSPLOG00000014787 #29	KCTD4 (ENSPLOG00000014817) #30	TPT1 (ENSPLOG00000014878) #31	SLC25A30 (ENSPLOG00000015133) #34	COG3 (ENSPLOG00000015229) #35	CBY2 (ENSPLOG00000015298) #36	SIAH3 (ENSPLOG00000015354) #37	ZC3H13 (ENSPLOG00000015430)	CPB2 (ENSPLOG00000015574)	LCP1 (ENSPLOG00000015767)
Cat	MODERN SPECIES		WBP4 (ENSFCAG00000035581) #7	KBTBD6 (ENSFCAG00000034478)	KBTBD7 (ENSFCAG00000006263)	MTRF1 (ENSFCAG00000031635) #9	NAA16 (ENSFCAG00000007219) #10	RGCC (ENSFCAG00000038293) #11	VWA8 (ENSFCAG00000005291) #12	DGKH (ENSFCAG00000005292) #13	AKAP11 (ENSFCAG00000005913) #14	TNFSF11 (ENSFCAG00000005912) #15	FAM216B (ENSFCAG00000039318) #17	EPSTI1 (ENSFCAG00000030356) #18	DNAJC15 (ENSFCAG00000022632) #19	ENOX1 (ENSFCAG00000010984) #20	CCDC122 (ENSFCAG00000025660) #21	LACC1 (ENSFCAG00000043479) #22	SERP2 (ENSFCAG00000044942) #23	TSC22D1 (ENSFCAG00000025840) #24	ENSFCAG00000028134	NUFIP1 (ENSFCAG00000013715) #25	GPALPP1 (ENSFCAG00000027174)	KCTD4 (ENSFCAG00000002106) #30	GTF2F2 (ENSFCAG00000002105) #29	TPT1 (ENSFCAG00000002107) #31	SLC25A30 (ENSFCAG00000027568) #34	COG3 (ENSFCAG00000004869) #35	ENSFCAG00000046561	CBY2 (ENSFCAG00000040111) #36	SIAH3 (ENSFCAG00000018417) #37	ZC3H13 (ENSFCAG00000004877)	CPB2 (ENSFCAG00000009181)
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Equus	ANCESTRAL SPECIES	26	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00390000016051.j #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163
Donkey	MODERN SPECIES	2	KBTBD7 (ENSEASG00005015712)	MTRF1 (ENSEASG00005015715) #9	ENSEASG00005015756 #10	ENSEASG00005035563 #10	RGCC (ENSEASG00005035316) #11	VWA8 (ENSEASG00005016214) #12	DGKH (ENSEASG00005016872) #13	AKAP11 (ENSEASG00005016987) #14	TNFSF11 (ENSEASG00005025411) #15	FAM216B (ENSEASG00005016998) #17	EPSTI1 (ENSEASG00005017003) #18	ENSEASG00005033429	DNAJC15 (ENSEASG00005027017) #19	ENOX1 (ENSEASG00005017017) #20	ENSEASG00005017023 #21	LACC1 (ENSEASG00005017025) #22	SMIM2 (ENSEASG00005030223)	SERP2 (ENSEASG00005017029) #23	ENSEASG00005031806	TSC22D1 (ENSEASG00005017037) #24	NUFIP1 (ENSEASG00005017043) #25	ENSEASG00005017051 #26	GTF2F2 (ENSEASG00005017062) #29	KCTD4 (ENSEASG00005028559) #30	TPT1 (ENSEASG00005017078) #31	ENSEASG00005017085 #34	COG3 (ENSEASG00005017090) #35	ENSEASG00005029663	CBY2 (ENSEASG00005017097) #36	SIAH3 (ENSEASG00005024437) #37	ZC3H13 (ENSEASG00005017100)
Horse	MODERN SPECIES	8	NAA16 (ENSECAG00000015497) #10	RGCC (ENSECAG00000013151) #11	ENSECAG00000050128	ENSECAG00000045148	VWA8 (ENSECAG00000006748) #12	DGKH (ENSECAG00000000237) #13	AKAP11 (ENSECAG00000021005) #14	TNFSF11 (ENSECAG00000016559) #15	FAM216B (ENSECAG00000015189) #17	ENSECAG00000050320	ENSECAG00000033495	EPSTI1 (ENSECAG00000009543) #18	DNAJC15 (ENSECAG00000007757) #19	ENOX1 (ENSECAG00000023538) #20	CCDC122 (ENSECAG00000020440) #21	LACC1 (ENSECAG00000018885) #22	SMIM2 (ENSECAG00000040685)	ENSECAG00000040040 #23	ENSECAG00000060045	TSC22D1 (ENSECAG00000005195) #24	NUFIP1 (ENSECAG00000013295) #25	GPALPP1 (ENSECAG00000009110) #26	KCTD4 (ENSECAG00000005117) #30	GTF2F2 (ENSECAG00000021923) #29	TPT1 (ENSECAG00000018348) #31	SLC25A30 (ENSECAG00000017334) #34	COG3 (ENSECAG00000003080) #35	ENSECAG00000033930	CBY2 (ENSECAG00000000488) #36	SIAH3 (ENSECAG00000025105) #37	ZC3H13 (ENSECAG00000022843)
Chiroptera	ANCESTRAL SPECIES	39	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Microchiroptera	ANCESTRAL SPECIES	40	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.A	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00390000014262	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.j #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37
Greater horseshoe bat	MODERN SPECIES	22	KBTBD6 (ENSRFEG00010018916)	ENSRFEG00010018883	KBTBD7 (ENSRFEG00010018870)	MTRF1 (ENSRFEG00010018838) #9	NAA16 (ENSRFEG00010018490) #10	RGCC (ENSRFEG00010018401) #11	VWA8 (ENSRFEG00010017755) #12	DGKH (ENSRFEG00010016960) #13	AKAP11 (ENSRFEG00010016903) #14	TNFSF11 (ENSRFEG00010016778) #15	FAM216B (ENSRFEG00010016757) #17	EPSTI1 (ENSRFEG00010016685) #18	DNAJC15 (ENSRFEG00010016645) #19	ENOX1 (ENSRFEG00010016570) #20	CCDC122 (ENSRFEG00010016478) #21	LACC1 (ENSRFEG00010016430) #22	SMIM2 (ENSRFEG00010016302)	ENSRFEG00010016228 #23	TSC22D1 (ENSRFEG00010016081) #24	ENSRFEG00010016066	NUFIP1 (ENSRFEG00010016018) #25	ENSRFEG00010015815 #26	KCTD4 (ENSRFEG00010015792) #30	GTF2F2 (ENSRFEG00010015746) #29	ENSRFEG00010015397 #31	SLC25A30 (ENSRFEG00010015316) #34	COG3 (ENSRFEG00010015220) #35	CBY2 (ENSRFEG00010015067) #36	SIAH3 (ENSRFEG00010015030) #37	LHFPL6 (ENSRFEG00010014955)	ENSRFEG00010014921
Microbat	MODERN SPECIES	944	KBTBD6 (ENSMLUG00000017068)	KBTBD7 (ENSMLUG00000029916)	MTRF1 (ENSMLUG00000017237) #9	NAA16 (ENSMLUG00000004194) #10	ENSMLUG00000009482	RGCC (ENSMLUG00000000695) #11	VWA8 (ENSMLUG00000015361) #12	DGKH (ENSMLUG00000016820) #13	AKAP11 (ENSMLUG00000026426) #14	TNFSF11 (ENSMLUG00000008819) #15	FAM216B (ENSMLUG00000012282) #17	ENSMLUG00000015553 #18	DNAJC15 (ENSMLUG00000008684) #19	ENOX1 (ENSMLUG00000000802) #20	CCDC122 (ENSMLUG00000009121) #21	LACC1 (ENSMLUG00000003112) #22	ENSMLUG00000027027	ENSMLUG00000011786	ENSMLUG00000003971	NUFIP1 (ENSMLUG00000008916) #25	ENSMLUG00000008692 #26	ENSMLUG00000010505 #29	KCTD4 (ENSMLUG00000010523) #30	ENSMLUG00000017709 ##31	SLC25A30 (ENSMLUG00000000506) #34	COG3 (ENSMLUG00000016157) #35	ENSMLUG00000026302	CBY2 (ENSMLUG00000010896) #36	SIAH3 (ENSMLUG00000029013) #37	ENSMLUG00000013512	ITM2B (ENSMLUG00000008317)
Megabat	MODERN SPECIES	8375																LACC1 (ENSPVAG00000008860) #22
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.C	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000165996	ENSGT01030000235083
Afrotheria	ANCESTRAL SPECIES	54	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.C	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000165996	ENSGT01030000235083	ENSGT00730000111163
Afrotheria_a	ANCESTRAL SPECIES	52	ENSGT00390000013956 #7	ENSGT00940000155175.B	ENSGT00940000155175.C	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512.a #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051.a.b.b ##31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000165996	ENSGT01030000235083	ENSGT00730000111163
Elephant	MODERN SPECIES	239	ENSLAFG00000022177 #9	ENSLAFG00000031338	NAA16 (ENSLAFG00000003231) #10	RGCC (ENSLAFG00000003234) #11	VWA8 (ENSLAFG00000007982) #12	ENSLAFG00000025669	DGKH (ENSLAFG00000009623) #13	ENSLAFG00000005777 #14	ENSLAFG00000029763 #14	TNFSF11 (ENSLAFG00000011256) #15	FAM216B (ENSLAFG00000032301) #17	EPSTI1 (ENSLAFG00000016838) #18	DNAJC15 (ENSLAFG00000004343) #19	ENOX1 (ENSLAFG00000004348) #20	CCDC122 (ENSLAFG00000008407) #21	LACC1 (ENSLAFG00000016028) #22	SERP2 (ENSLAFG00000000162) #23	TSC22D1 (ENSLAFG00000014574) #24	NUFIP1 (ENSLAFG00000013760) #25	GPALPP1 (ENSLAFG00000013763)	GTF2F2 (ENSLAFG00000009325) #29	KCTD4 (ENSLAFG00000009328) #30	ENSLAFG00000021740 ##31	SLC25A30 (ENSLAFG00000001502) #34	COG3 (ENSLAFG00000021400) #35	ENSLAFG00000010158	CBY2 (ENSLAFG00000011325) #36	ENSLAFG00000026189	ENSLAFG00000016747	CPB2 (ENSLAFG00000016759)	LCP1 (ENSLAFG00000009574)
Hyrax	MODERN SPECIES	6010																ENSPCAG00000002648 #22
Tenrec	MODERN SPECIES	14855																LACC1 (ENSETEG00000008509) #22
Xenarthra	ANCESTRAL SPECIES	290															ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051.a.b.a.b #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000160425
Sloth	MODERN SPECIES	12115																LACC1 (ENSCHOG00000010571) #22
Armadillo	MODERN SPECIES	1505															CCDC122 (ENSDNOG00000001686) #21	LACC1 (ENSDNOG00000001688) #22	ENSDNOG00000035109	ENSDNOG00000049080	TSC22D1 (ENSDNOG00000045575) #24	NUFIP1 (ENSDNOG00000032481) #25	GPALPP1 (ENSDNOG00000032373)	KCTD4 (ENSDNOG00000000779) #30	ENSDNOG00000045540 #29	ENSDNOG00000000653 #31	SLC25A30 (ENSDNOG00000012057) #34	COG3 (ENSDNOG00000006811) #35	ENSDNOG00000044520	ENSDNOG00000038674	CBY2 (ENSDNOG00000043420) #36
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.bb.a #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183114.a.b.b.f.a.b
Opossum	MODERN SPECIES	6	NAA16 (ENSMODG00000014799) #10	RGCC (ENSMODG00000014805) #11	VWA8 (ENSMODG00000014823) #12	ENSMODG00000046520	DGKH (ENSMODG00000014844) #13	AKAP11 (ENSMODG00000014848) #14	ENSMODG00000046331	ENSMODG00000051302	ENSMODG00000024949	TNFSF11 (ENSMODG00000014856) #15	ENSMODG00000042637	ENSMODG00000025483 #18	DNAJC15 (ENSMODG00000014875) #19	ENOX1 (ENSMODG00000014885) #20	ENSMODG00000014889 #21	LACC1 (ENSMODG00000014893) #22	ENSMODG00000043328 #23	TSC22D1 (ENSMODG00000014919) #24	ENSMODG00000014924 #25	ENSMODG00000014930 #26	ENSMODG00000025484 #29	ENSMODG00000029120	KCTD4 (ENSMODG00000024944) #30	ENSMODG00000014940 #31	SLC25A30 (ENSMODG00000014945) #34	COG3 (ENSMODG00000014952) #35	CBY2 (ENSMODG00000014955) #36	SIAH3 (ENSMODG00000014958) #37	ZC3H13 (ENSMODG00000014969)	CPB2 (ENSMODG00000014975)	AOX2 (ENSMODG00000014990)
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.cb #29	ENSGT00390000016051.bb.a #29	ENSGT00390000006051.d.a #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.bb.a #29	ENSGT00390000006051.d.a #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00390000012561.b.a.a
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00940000157039.b	ENSGT00390000013956.a #7	ENSGT00990000203769	ENSGT00940000164962.a	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000159144.B #24	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051.bb.a.a #29	ENSGT00390000006051.d.a #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.a #36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00390000012561.b.a.a
Common wonbat	MODERN SPECIES	1038	ENSVURG00010009621 #7	ENSVURG00010009611	MTRF1 (ENSVURG00010009603) #9	ENSVURG00010009596	ENSVURG00010009594 #10	ENSVURG00010009585 #10	RGCC (ENSVURG00010009578) #11	VWA8 (ENSVURG00010009546) #12	DGKH (ENSVURG00010009526) #13	AKAP11 (ENSVURG00010009504) #14	TNFSF11 (ENSVURG00010009490) #15	EPSTI1 (ENSVURG00010009463) #18	DNAJC15 (ENSVURG00010009445) #19	ENOX1 (ENSVURG00010009418) #20	CCDC122 (ENSVURG00010009366) #21	LACC1 (ENSVURG00010009356) #22	ENSVURG00010009327	ENSVURG00010009282 #25	ENSVURG00010009277 #26	KCTD4 (ENSVURG00010009263) #30	ENSVURG00010009253 #29	ENSVURG00010009218 #31	SLC25A30 (ENSVURG00010009204) #34	COG3 (ENSVURG00010009151) #35	CBY2 (ENSVURG00010009129) #36	SIAH3 (ENSVURG00010009121) #37	ZC3H13 (ENSVURG00010009067)	CPB2 (ENSVURG00010009039)	ENSVURG00010009007	ENSVURG00010008907	CLK1 (ENSVURG00010008863)
koala	MODERN SPECIES	7												ENSPCIG00000025310 #18	DNAJC15 (ENSPCIG00000032957) #19	ENOX1 (ENSPCIG00000025307) #20	CCDC122 (ENSPCIG00000015014) #21	LACC1 (ENSPCIG00000015015) #22	ENSPCIG00000031615 #23	TSC22D1 (ENSPCIG00000013866) #24	ENSPCIG00000029589 #25	ENSPCIG00000029588 #26	KCTD4 (ENSPCIG00000029586) #30	ENSPCIG00000029578 #29	ENSPCIG00000029567 #31	SLC25A30 (ENSPCIG00000029561) #34	COG3 (ENSPCIG00000029554) #35	CBY2 (ENSPCIG00000032716) #36	SIAH3 (ENSPCIG00000035020) #37	ZC3H13 (ENSPCIG00000029529)	CPB2 (ENSPCIG00000029518)	ENSPCIG00000019812	BZW1 (ENSPCIG00000019483)
Wallaby	MODERN SPECIES	11667															ENSMEUG00000011404 #21	LACC1 (ENSMEUG00000011410) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000017887	WBP4 (ENSSHAG00000018027) #7	ENSSHAG00000023806	MTRF1 (ENSSHAG00000018109) #9	NAA16 (ENSSHAG00000018196) #10	RGCC (ENSSHAG00000029520) #11	VWA8 (ENSSHAG00000027337) #12	ENSSHAG00000022714	DGKH (ENSSHAG00000001014) #13	AKAP11 (ENSSHAG00000022883) #14	TNFSF11 (ENSSHAG00000001297) #15	ENSSHAG00000010849 #18	DNAJC15 (ENSSHAG00000011722) #19	ENOX1 (ENSSHAG00000012702) #20	CCDC122 (ENSSHAG00000022118) #21	ENSSHAG00000015643 #22	ENSSHAG00000023950	ENSSHAG00000029832	ENSSHAG00000002127 #25	ENSSHAG00000003663 #26	KCTD4 (ENSSHAG00000025523) #30	ENSSHAG00000031130 #29	ENSSHAG00000001545 #31	ENSSHAG00000003644 #34	COG3 (ENSSHAG00000005057) #35	ENSSHAG00000005964	CBY2 (ENSSHAG00000008208) #36	SIAH3 (ENSSHAG00000008837) #37	ZC3H13 (ENSSHAG00000010568)	ENSSHAG00000011001	ENSSHAG00000011752
Platypus	MODERN SPECIES	12	TFDP1 (ENSOANG00000015627)	GRK1 (ENSOANG00000015626)	ARHGEF7 (ENSOANG00000015625)	ANKRD10 (ENSOANG00000047091)	ING1 (ENSOANG00000041904)	CARS2 (ENSOANG00000015623)	ENSOANG00000015622	ENSOANG00000044597	RAB20 (ENSOANG00000015621)	ENSOANG00000015616	ENSOANG00000044308	MYO16 (ENSOANG00000015599)	TNFSF13B (ENSOANG00000015596)	ABHD13 (ENSOANG00000015937)	LIG4 (ENSOANG00000015936)	LACC1 (ENSOANG00000015595) #22	TSC22D1 (ENSOANG00000036903) #24	ENSOANG00000049076 #25	KCTD4 (ENSOANG00000015587) #30	GTF2F2 (ENSOANG00000022461) #29	TPT1 (ENSOANG00000047981) #31	SLC25A30 (ENSOANG00000015582) #35	ENSOANG00000028229	SIAH3 (ENSOANG00000051226) #37	ZC3H13 (ENSOANG00000015580)	CPB2 (ENSOANG00000015578)	LCP1 (ENSOANG00000015575)	RUBCNL (ENSOANG00000015572)	LRCH1 (ENSOANG00000015567)	ESD (ENSOANG00000015566)	SUCLA2 (ENSOANG00000015563)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163
Archosauria	ANCESTRAL SPECIES	2	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160
Aves	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Neognathae_b	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT01040000244746	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Passeriformes	ANCESTRAL SPECIES	1	ENSGT01040000244746	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT01030000237957	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Great tit	MODERN SPECIES		SUGT1 (ENSPMJG00000014871)	ELF1 (ENSPMJG00000014872)	WBP4 (ENSPMJG00000014873) #7	MTRF1 (ENSPMJG00000014874) #9	ENSPMJG00000014875	NAA16 (ENSPMJG00000014876) #10	RGCC (ENSPMJG00000014877) #11	VWA8 (ENSPMJG00000014878) #12	DGKH (ENSPMJG00000014879) #13	AKAP11 (ENSPMJG00000014880) #14	TNFSF11 (ENSPMJG00000014883) #15	EPSTI1 (ENSPMJG00000014885) #18	DNAJC15 (ENSPMJG00000014886) #19	ENOX1 (ENSPMJG00000014887) #20	CCDC122 (ENSPMJG00000014888) #21	LACC1 (ENSPMJG00000014889) #22	ENSPMJG00000014893	ENSPMJG00000014894	ENSPMJG00000014897 #25	GPALPP1 (ENSPMJG00000014898)	GTF2F2 (ENSPMJG00000014899) #29	KCTD4 (ENSPMJG00000014900) #30	TPT1 (ENSPMJG00000014901) #31	SLC25A30 (ENSPMJG00000014903) #34	COG3 (ENSPMJG00000014904) #35	ENSPMJG00000014906	SIAH3 (ENSPMJG00000014907) #37	ZC3H13 (ENSPMJG00000014908)	CPB2 (ENSPMJG00000014909)	LCP1 (ENSPMJG00000014910)	RUBCNL (ENSPMJG00000014911)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT01040000244746	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT01030000237957	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907.t #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Flycatcher	MODERN SPECIES		ELF1 (ENSFALG00000008008)	WBP4 (ENSFALG00000008022) #7	MTRF1 (ENSFALG00000008036) #9	ENSFALG00000028279	NAA16 (ENSFALG00000008048) #10	RGCC (ENSFALG00000027799) #11	ENSFALG00000024593	VWA8 (ENSFALG00000008073) #12	DGKH (ENSFALG00000008106) #13	AKAP11 (ENSFALG00000028283) #14	TNFSF11 (ENSFALG00000027225) #15	EPSTI1 (ENSFALG00000008123) #18	DNAJC15 (ENSFALG00000028222) #19	ENOX1 (ENSFALG00000008134) #20	CCDC122 (ENSFALG00000026793) #21	LACC1 (ENSFALG00000008143) #22	TSC22D1 (ENSFALG00000008145)	NUFIP1 (ENSFALG00000024457) #25	GPALPP1 (ENSFALG00000027021)	GTF2F2 (ENSFALG00000028328) #29	KCTD4 (ENSFALG00000014420) #30	TPT1 (ENSFALG00000008180) #31	ENSFALG00000008188 #34	COG3 (ENSFALG00000008192) #35	ENSFALG00000014437	SIAH3 (ENSFALG00000008195) #37	ZC3H13 (ENSFALG00000008196)	CPB2 (ENSFALG00000008204)	LCP1 (ENSFALG00000008208)	RUBCNL (ENSFALG00000008218)	LRCH1 (ENSFALG00000008234)
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT01030000237957	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907.t #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT01030000237957	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907.t #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Common canary	MODERN SPECIES	4	CNMD (ENSSCAG00000014448)	SUGT1 (ENSSCAG00000014446)	ELF1 (ENSSCAG00000014441)	WBP4 (ENSSCAG00000014439) #7	MTRF1 (ENSSCAG00000014435) #9	NAA16 (ENSSCAG00000014433) #10	RGCC (ENSSCAG00000014431) #11	VWA8 (ENSSCAG00000014421) #12	DGKH (ENSSCAG00000013975) #13	AKAP11 (ENSSCAG00000013822) #14	TNFSF11 (ENSSCAG00000013817) #15	ENSSCAG00000013809	DNAJC15 (ENSSCAG00000013807) #19	ENOX1 (ENSSCAG00000013800) #20	CCDC122 (ENSSCAG00000013780) #21	LACC1 (ENSSCAG00000013774) #22	ENSSCAG00000013770	ENSSCAG00000013767	NUFIP1 (ENSSCAG00000013762) #25	GPALPP1 (ENSSCAG00000013759)	KCTD4 (ENSSCAG00000013749) #30	GTF2F2 (ENSSCAG00000013687) #29	TPT1 (ENSSCAG00000013667) #31	SLC25A30 (ENSSCAG00000013663) #34	COG3 (ENSSCAG00000013411) #35	ENSSCAG00000013339	SIAH3 (ENSSCAG00000013336) #37	ZC3H13 (ENSSCAG00000013302)	CPB2 (ENSSCAG00000013273)	LCP1 (ENSSCAG00000013250)	RUBCNL (ENSSCAG00000013235)
Zebra finch	MODERN SPECIES		CNMD (ENSTGUG00000012448)	SUGT1 (ENSTGUG00000024443)	ELF1 (ENSTGUG00000012438)	WBP4 (ENSTGUG00000023820) #7	MTRF1 (ENSTGUG00000012422) #9	ENSTGUG00000023056	NAA16 (ENSTGUG00000012418) #10	VWA8 (ENSTGUG00000012398) #12	DGKH (ENSTGUG00000012377) #13	AKAP11 (ENSTGUG00000018872) #14	TNFSF11 (ENSTGUG00000025888) #15	EPSTI1 (ENSTGUG00000012366) #18	ENSTGUG00000024533 #19	ENOX1 (ENSTGUG00000012357) #20	CCDC122 (ENSTGUG00000022901) #21	LACC1 (ENSTGUG00000012353) #22	ENSTGUG00000028881	NUFIP1 (ENSTGUG00000012321) #25	GPALPP1 (ENSTGUG00000012338)	GTF2F2 (ENSTGUG00000012334) #29	KCTD4 (ENSTGUG00000022029) #30	TPT1 (ENSTGUG00000012322) #31	SLC25A30 (ENSTGUG00000012317) #34	COG3 (ENSTGUG00000012310) #35	ENSTGUG00000012308	SIAH3 (ENSTGUG00000012307) #37	ZC3H13 (ENSTGUG00000012299)	CPB2 (ENSTGUG00000012294)	LCP1 (ENSTGUG00000012284)	RUBCNL (ENSTGUG00000012281)	LRCH1 (ENSTGUG00000012267)
Medium ground finch	MODERN SPECIES	25	OLFM4 (ENSGFOG00000011424)	PCDH8 (ENSGFOG00000011427)	CNMD (ENSGFOG00000011432)	SUGT1 (ENSGFOG00000011441)	ELF1 (ENSGFOG00000011454)	WBP4 (ENSGFOG00000011468) #7	MTRF1 (ENSGFOG00000011488) #9	NAA16 (ENSGFOG00000011498) #10	VWA8 (ENSGFOG00000011517) #12	DGKH (ENSGFOG00000011568) #13	AKAP11 (ENSGFOG00000011744) #14	TNFSF11 (ENSGFOG00000011755) #15	DNAJC15 (ENSGFOG00000011773) #19	ENOX1 (ENSGFOG00000011780) #20	CCDC122 (ENSGFOG00000011793) #21	LACC1 (ENSGFOG00000011807) #22	ENSGFOG00000011814	ENSGFOG00000011822	NUFIP1 (ENSGFOG00000011829) #25	GPALPP1 (ENSGFOG00000011840)	GTF2F2 (ENSGFOG00000011848) #29	KCTD4 (ENSGFOG00000011857) #30	TPT1 (ENSGFOG00000011861) #31	SLC25A30 (ENSGFOG00000011870) #34	COG3 (ENSGFOG00000011892) #35	ENSGFOG00000011940	SIAH3 (ENSGFOG00000011944) #37	ENSGFOG00000011945	ENSGFOG00000011951	CPB2 (ENSGFOG00000011953)	LCP1 (ENSGFOG00000011957)
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585	ENSGT00940000159528.d
Golden eagle	MODERN SPECIES	5	SUGT1 (ENSACCG00020015201)	ELF1 (ENSACCG00020015224)	WBP4 (ENSACCG00020015243) #7	MTRF1 (ENSACCG00020015274) #9	ENSACCG00020015285	NAA16 (ENSACCG00020015320) #10	RGCC (ENSACCG00020015343) #11	VWA8 (ENSACCG00020015386) #12	DGKH (ENSACCG00020015448) #13	AKAP11 (ENSACCG00020015487) #14	TNFSF11 (ENSACCG00020015505) #15	ENSACCG00020015518 #18	DNAJC15 (ENSACCG00020015524) #19	ENOX1 (ENSACCG00020015543) #20	CCDC122 (ENSACCG00020015565) #21	LACC1 (ENSACCG00020015577) #22	ENSACCG00020015612	NUFIP1 (ENSACCG00020015631) #25	GPALPP1 (ENSACCG00020015644)	GTF2F2 (ENSACCG00020015664) #29	KCTD4 (ENSACCG00020015681) #30	TPT1 (ENSACCG00020015696) #31	COG3 (ENSACCG00020015739) #35	ENSACCG00020011478	SIAH3 (ENSACCG00020011489) #37	ZC3H13 (ENSACCG00020011527)	CPB2 (ENSACCG00020011590)	LCP1 (ENSACCG00020011643)	RUBCNL (ENSACCG00020011678)	LRCH1 (ENSACCG00020011771)	ESD (ENSACCG00020011833)
Kakapo	MODERN SPECIES	11	PCDH8 (ENSSHBG00005004003)	CNMD (ENSSHBG00005004010)	SUGT1 (ENSSHBG00005004023)	ELF1 (ENSSHBG00005004033)	WBP4 (ENSSHBG00005004096) #7	MTRF1 (ENSSHBG00005004118) #9	NAA16 (ENSSHBG00005004130) #10	RGCC (ENSSHBG00005004142) #11	VWA8 (ENSSHBG00005004472) #12	DGKH (ENSSHBG00005007915) #13	AKAP11 (ENSSHBG00005007930) #14	TNFSF11 (ENSSHBG00005007943) #15	DNAJC15 (ENSSHBG00005007958) #19	ENOX1 (ENSSHBG00005007972) #20	CCDC122 (ENSSHBG00005007991) #21	LACC1 (ENSSHBG00005008008) #22	ENSSHBG00005008015	ENSSHBG00005008048	NUFIP1 (ENSSHBG00005008070) #25	GPALPP1 (ENSSHBG00005008087)	GTF2F2 (ENSSHBG00005008110) #29	TPT1 (ENSSHBG00005008145) #31	SLC25A30 (ENSSHBG00005008167) #34	ENSSHBG00005008173	COG3 (ENSSHBG00005008186) #35	ENSSHBG00005008211	SIAH3 (ENSSHBG00005008221) #37	ZC3H13 (ENSSHBG00005008235)	CPB2 (ENSSHBG00005008274)	LCP1 (ENSSHBG00005008297)	RUBCNL (ENSSHBG00005008318)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT01090000261481	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Anatidae	ANCESTRAL SPECIES	16	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT01090000261481	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000173214
Pink-footed goose	MODERN SPECIES	86	PCDH8 (ENSABRG00000003637)	CNMD (ENSABRG00000003647)	SUGT1 (ENSABRG00000003660)	ELF1 (ENSABRG00000003673)	WBP4 (ENSABRG00000003700) #7	MTRF1 (ENSABRG00000003716) #9	NAA16 (ENSABRG00000003737) #10	RGCC (ENSABRG00000003765) #11	VWA8 (ENSABRG00000003780) #12	DGKH (ENSABRG00000003834) #13	AKAP11 (ENSABRG00000003947) #14	TNFSF11 (ENSABRG00000003983) #15	EPSTI1 (ENSABRG00000003988) #18	DNAJC15 (ENSABRG00000004012) #19	ENOX1 (ENSABRG00000004056) #20	LACC1 (ENSABRG00000004118) #22	CCDC122 (ENSABRG00000004125) #21	ENSABRG00000004172
Duck	MODERN SPECIES		MRPS31 (ENSAPLG00000004031)	SLC25A15 (ENSAPLG00000004206)	ENSAPLG00000004373	ENSAPLG00000004714	THSD1 (ENSAPLG00000004848)	VPS36 (ENSAPLG00000004957)	CKAP2 (ENSAPLG00000005260)	NEK3 (ENSAPLG00000005738)	ENSAPLG00000020511	ENSAPLG00000030312	ALG11 (ENSAPLG00000006293)	ATP7B (ENSAPLG00000006302)	ENSAPLG00000001622	ENSAPLG00000029610	CCDC122 (ENSAPLG00000005173) #21	LACC1 (ENSAPLG00000005165) #22	ENSAPLG00000020430	ENSAPLG00000021916	NUFIP1 (ENSAPLG00000004973) #25	GPALPP1 (ENSAPLG00000004496)	ENSAPLG00000004532	GTF2F2 (ENSAPLG00000004535) #29	TPT1 (ENSAPLG00000004672) #31	SLC25A30 (ENSAPLG00000011120) #34	COG3 (ENSAPLG00000010918) #35	ENSAPLG00000027871	ENSAPLG00000000777 ##36	SIAH3 (ENSAPLG00000020494) #37	ZC3H13 (ENSAPLG00000002707)	CPB2 (ENSAPLG00000002595)	LCP1 (ENSAPLG00000000904)
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT01090000261481	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Japanese quail	MODERN SPECIES		CNMD (ENSCJPG00005019681)	SUGT1 (ENSCJPG00005019682)	ELF1 (ENSCJPG00005019683)	WBP4 (ENSCJPG00005019684) #7	MTRF1 (ENSCJPG00005019685) #9	NAA16 (ENSCJPG00005019686) #10	RGCC (ENSCJPG00005019688) #11	VWA8 (ENSCJPG00005019697) #12	DGKH (ENSCJPG00005019705) #13	AKAP11 (ENSCJPG00005019706) #14	TNFSF11 (ENSCJPG00005019710) #15	ENSCJPG00005019712	EPSTI1 (ENSCJPG00005019713) #18	DNAJC15 (ENSCJPG00005019714) #19	ENOX1 (ENSCJPG00005019716) #20	LACC1 (ENSCJPG00005019718) #22	CCDC122 (ENSCJPG00005019719) #21	ENSCJPG00005019723	ENSCJPG00005019724	NUFIP1 (ENSCJPG00005019727) #25	GPALPP1 (ENSCJPG00005019728)	GTF2F2 (ENSCJPG00005019729) #29	KCTD4 (ENSCJPG00005019730) #30	TPT1 (ENSCJPG00005019733) #31	SLC25A30 (ENSCJPG00005019734) #34	COG3 (ENSCJPG00005019735) #35	ENSCJPG00005019753	ENSCJPG00005019754 ##36	SIAH3 (ENSCJPG00005019755) #37	ZC3H13 (ENSCJPG00005019756)	CPB2 (ENSCJPG00005019757)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT01090000261481	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000169379	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Turkey	MODERN SPECIES		ENSMGAG00000014997	ENSMGAG00000014996	ENSMGAG00000016700 ##36	ENSMGAG00000014995 #37	ENSMGAG00000014993	ENSMGAG00000014992 #35	ENSMGAG00000014991 #34	ENSMGAG00000015561 #30	ENSMGAG00000014989 #29	ENSMGAG00000014990 #31	GTF2F2 (ENSMGAG00000020273) #29	ENSMGAG00000014988	ENSMGAG00000014987 #25	ENSMGAG00000014986	ENSMGAG00000018208 #24	ENSMGAG00000017353 #22	ENSMGAG00000014982 #21	ENSMGAG00000014981 #20	ENSMGAG00000020535 #20	ENSMGAG00000014980 #19	ENSMGAG00000014978 #18	ENSMGAG00000019324	ENSMGAG00000014976 #14	ENSMGAG00000014975 #13	ENSMGAG00000022612 #13	ENSMGAG00000014974 #12	ENSMGAG00000022914 #11	ENSMGAG00000014972 #10	ENSMGAG00000014971 #9	ENSMGAG00000014970 #7	ENSMGAG00000018775
Chicken	MODERN SPECIES		SUGT1 (ENSGALG00010003024)	ELF1 (ENSGALG00010003072)	WBP4 (ENSGALG00010003113) #7	MTRF1 (ENSGALG00010003169) #9	NAA16 (ENSGALG00010003183) #10	RGCC (ENSGALG00010003192) #11	VWA8 (ENSGALG00010003246) #12	DGKH (ENSGALG00010003254) #13	AKAP11 (ENSGALG00010003271) #14	TNFSF11 (ENSGALG00010003276) #15	ENSGALG00010003283	ENSGALG00010003293	EPSTI1 (ENSGALG00010003331) #18	DNAJC15 (ENSGALG00010003358) #19	ENOX1 (ENSGALG00010003372) #20	LACC1 (ENSGALG00010003432) #22	CCDC122 (ENSGALG00010003461) #21	TSC22D1 (ENSGALG00010003466)	ENSGALG00010004728	ENSGALG00010003495	NUFIP1 (ENSGALG00010003503) #25	GPALPP1 (ENSGALG00010003509)	GTF2F2 (ENSGALG00010003517) #29	KCTD4 (ENSGALG00010003519) #30	TPT1 (ENSGALG00010003558) #31	SLC25A30 (ENSGALG00010003589) #34	COG3 (ENSGALG00010003617) #35	SPERT (ENSGALG00010003713)	SIAH3 (ENSGALG00010003718) #37	ZC3H13 (ENSGALG00010003734)	CPB2 (ENSGALG00010003750)
African ostrich	MODERN SPECIES	800																LACC1 (ENSSCUG00000012395) #22	CCDC122 (ENSSCUG00000012397) #21	ENSSCUG00000012403	NUFIP1 (ENSSCUG00000012409) #25	ENSSCUG00000012411 #26	GTF2F2 (ENSSCUG00000012412) #29	KCTD4 (ENSSCUG00000012413) #30	TPT1 (ENSSCUG00000012416) #31	SLC25A30 (ENSSCUG00000012421) #34
Australian saltwater crocodile	MODERN SPECIES	27	CNMD (ENSCPRG00005018818)	SUGT1 (ENSCPRG00005018821)	ELF1 (ENSCPRG00005018823)	WBP4 (ENSCPRG00005018826) #7	MTRF1 (ENSCPRG00005018828) #9	NAA16 (ENSCPRG00005000330) #10	RGCC (ENSCPRG00005000828) #11	VWA8 (ENSCPRG00005000978) #12	DGKH (ENSCPRG00005001063) #13	AKAP11 (ENSCPRG00005001078) #14	TNFSF11 (ENSCPRG00005001171) #15	EPSTI1 (ENSCPRG00005001259) #18	DNAJC15 (ENSCPRG00005001271) #19	ENOX1 (ENSCPRG00005001394) #20	CCDC122 (ENSCPRG00005001471) #21	LACC1 (ENSCPRG00005001487) #22	SERP2 (ENSCPRG00005001533) #23	ENSCPRG00005001536	ENSCPRG00005001575	NUFIP1 (ENSCPRG00005001604) #25	ENSCPRG00005001615 #26	GTF2F2 (ENSCPRG00005001658) #29	KCTD4 (ENSCPRG00005001667) #30	TPT1 (ENSCPRG00005001672) #31	COG3 (ENSCPRG00005001678) #35	ENSCPRG00005001717 ##36	ENSCPRG00005001718	SIAH3 (ENSCPRG00005001723) #37	ZC3H13 (ENSCPRG00005001772)	CPB2 (ENSCPRG00005001803)	LCP1 (ENSCPRG00005001844)
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163
Testudinidae	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b
Abingdon island giant tortoise	MODERN SPECIES	820											EPSTI1 (ENSCABG00000019605) #18	DNAJC15 (ENSCABG00000019603) #19	ENSCABG00000019602	ENOX1 (ENSCABG00000019597) #20	CCDC122 (ENSCABG00000019595) #21	LACC1 (ENSCABG00000019582) #22	SERP2 (ENSCABG00000019578) #23	ENSCABG00000019575	ENSCABG00000019573	NUFIP1 (ENSCABG00000019570) #25	GPALPP1 (ENSCABG00000019567)
Goode s thornscrub tortoise	MODERN SPECIES		ELF1 (ENSGEVG00005007874)	ENSGEVG00005007850	WBP4 (ENSGEVG00005007828) #7	MTRF1 (ENSGEVG00005007806) #9	NAA16 (ENSGEVG00005007739) #10	RGCC (ENSGEVG00005007709) #11	VWA8 (ENSGEVG00005007641) #12	DGKH (ENSGEVG00005007555) #13	AKAP11 (ENSGEVG00005007525) #14	TNFSF11 (ENSGEVG00005007495) #15	ENSGEVG00005007464 #17	EPSTI1 (ENSGEVG00005007445) #18	DNAJC15 (ENSGEVG00005007427) #19	ENOX1 (ENSGEVG00005007371) #20	CCDC122 (ENSGEVG00005007344) #21	LACC1 (ENSGEVG00005007327) #22	SERP2 (ENSGEVG00005007300) #23	ENSGEVG00005007278	NUFIP1 (ENSGEVG00005007250) #25	ENSGEVG00005007226 #26	KCTD4 (ENSGEVG00005007209) #30	GTF2F2 (ENSGEVG00005007190) #29	TPT1 (ENSGEVG00005007172) #31	SLC25A30 (ENSGEVG00005007147) #34	COG3 (ENSGEVG00005007071) #35	ENSGEVG00005007027 ##36	SIAH3 (ENSGEVG00005007014) #37	ZC3H13 (ENSGEVG00005006980)	ENSGEVG00005006953	CPB2 (ENSGEVG00005006904)	LCP1 (ENSGEVG00005006872)
Emydidae	ANCESTRAL SPECIES	63	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000153137.a.b.b.b ##36	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000165996
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	1	ENSTMTG00000006691	ENSTMTG00000006679 #7	ENSTMTG00000006660 #9	ENSTMTG00000005913 #10	ENSTMTG00000005824 #11	ENSTMTG00000002353 #12	ENSTMTG00000002046 #13	ENSTMTG00000001710 #14	ENSTMTG00000001612	ENSTMTG00000001603 #15	ENSTMTG00000001591 #18	ENSTMTG00000001585 #19	ENSTMTG00000001580	ENSTMTG00000001563 #20	ENSTMTG00000001552	ENSTMTG00000001537 #22	ENSTMTG00000001527 #23	ENSTMTG00000001520	ENSTMTG00000001513 #25	ENSTMTG00000001508	ENSTMTG00000001500 #30	ENSTMTG00000001486 #29	ENSTMTG00000001464 #31	ENSTMTG00000001454 #34	ENSTMTG00000001186 #35	ENSTMTG00000001090 ##36	ENSTMTG00000001077 #37	ZC3H13 (ENSTMTG00000001053)	ENSTMTG00000001037	ENSTMTG00000000317	ENSTMTG00000000029
Three-toed box turtle	MODERN SPECIES	2	ENSTMTG00000014905	ENSTMTG00000014897 #7	ENSTMTG00000014883 #9	ENSTMTG00000014849 #10	ENSTMTG00000014836 #11	ENSTMTG00000012069 #12	ENSTMTG00000011679 #13	ENSTMTG00000011355 #14	ENSTMTG00000011311 #15	ENSTMTG00000013365	ENSTMTG00000013347 #18	ENSTMTG00000013337 #19	ENSTMTG00000013330	ENSTMTG00000013296 #20	ENSTMTG00000013271	ENSTMTG00000013255 #22	ENSTMTG00000013242 #23	ENSTMTG00000013229	ENSTMTG00000013191 #25	ENSTMTG00000013172	ENSTMTG00000013168 #30	ENSTMTG00000013140 #29	ENSTMTG00000013100 #31	ENSTMTG00000013078 #34	ENSTMTG00000013046 #35	ENSTMTG00000013027 ##36	ENSTMTG00000013018 #37	ENSTMTG00000013006	ENSTMTG00000012990	ENSTMTG00000012970	ENSTMTG00000007992
painted turtle	MODERN SPECIES		PLCL1 (ENSCPBG00000007848)	ENSCPBG00000007878	ENSCPBG00000007882	PCDH17 (ENSCPBG00000007892)	ENSCPBG00000007894	ENSCPBG00000007903	CNMD (ENSCPBG00000007913)	SUGT1 (ENSCPBG00000007923)	ELF1 (ENSCPBG00000007936)	WBP4 (ENSCPBG00000007957) #7	ENSCPBG00000007965	MTRF1 (ENSCPBG00000007969) #9	NAA16 (ENSCPBG00000007986) #10	RGCC (ENSCPBG00000008004) #11	VWA8 (ENSCPBG00000008021) #12	LACC1 (ENSCPBG00000008044) #22	SERP2 (ENSCPBG00000008055) #23	ENSCPBG00000008064	NUFIP1 (ENSCPBG00000008069) #25	GPALPP1 (ENSCPBG00000008078)	GTF2F2 (ENSCPBG00000008086) #29	KCTD4 (ENSCPBG00000008094) #30	ENSCPBG00000008104 #31	SLC25A30 (ENSCPBG00000008116) #34	COG3 (ENSCPBG00000008129) #35	ENSCPBG00000008168	ENSCPBG00000008175 ##36	SIAH3 (ENSCPBG00000008182) #37	ENSCPBG00000008192	CPB2 (ENSCPBG00000008214)	LCP1 (ENSCPBG00000008230)
Chinese turtle	MODERN SPECIES	1169	SUGT1 (ENSPSIG00000005655)	ELF1 (ENSPSIG00000006204)	WBP4 (ENSPSIG00000006270) #7	MTRF1 (ENSPSIG00000004773) #9	NAA16 (ENSPSIG00000005139) #10	VWA8 (ENSPSIG00000005988) #12	ENSPSIG00000006588 #13	ENSPSIG00000006696 #13	AKAP11 (ENSPSIG00000006777) #14	TNFSF11 (ENSPSIG00000007115) #15	ENSPSIG00000007124	ENSPSIG00000001077	DNAJC15 (ENSPSIG00000007131) #19	ENOX1 (ENSPSIG00000007152) #20	CCDC122 (ENSPSIG00000007381) #21	LACC1 (ENSPSIG00000007488) #22	ENSPSIG00000007493	ENSPSIG00000001094	NUFIP1 (ENSPSIG00000007498) #25	ENSPSIG00000007503 #26	KCTD4 (ENSPSIG00000001109) #30
Lepidosauria	ANCESTRAL SPECIES	40	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000012569.b #26	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00940000160585
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736	ENSGT00940000159900	ENSGT00940000157061.a.j	ENSGT00940000153203.B	ENSGT00940000164256
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000154512 #17	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736	ENSGT00940000159900	ENSGT00940000157061.a.j	ENSGT00940000153203.B	ENSGT00940000164256
Elapidae	ANCESTRAL SPECIES	13	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00550000075117	ENSGT00990000203769	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736	ENSGT00940000159900	ENSGT00940000157061.a.j	ENSGT00940000153203.B	ENSGT00940000164256
Indian cobra	MODERN SPECIES	5	OLFM4 (ENSNNAG00000015722)	ENSNNAG00000015760	SUGT1 (ENSNNAG00000015788)	ELF1 (ENSNNAG00000015818)	WBP4 (ENSNNAG00000015833) #7	SLC25A38 (ENSNNAG00000015851)	ENSNNAG00000015862	MTRF1 (ENSNNAG00000015872) #9	NAA16 (ENSNNAG00000015941) #10	RGCC (ENSNNAG00000016393) #11	DGKH (ENSNNAG00000016413) #13	ENSNNAG00000016639 #14	DNAJC15 (ENSNNAG00000016663) #19	ENOX1 (ENSNNAG00000016671) #20	ENSNNAG00000016694	LACC1 (ENSNNAG00000016702) #22	ENSNNAG00000016709	GPALPP1 (ENSNNAG00000007615)	GTF2F2 (ENSNNAG00000007652) #29	KCTD4 (ENSNNAG00000007740) #30	TPT1 (ENSNNAG00000007771) #31	SLC25A30 (ENSNNAG00000007807) #34	ST3GAL5 (ENSNNAG00000007849)	ATOH8 (ENSNNAG00000007882)	FGFRL1 (ENSNNAG00000007904)	SPON2 (ENSNNAG00000007927)	CTBP1 (ENSNNAG00000007965)	ENSNNAG00000008030	MAEA (ENSNNAG00000008048)	ENSNNAG00000008082	NKX1-1 (ENSNNAG00000008125)
Elapidae_a	ANCESTRAL SPECIES	70	ENSGT00940000155219	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00550000075117	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151
Acanthophiinae	ANCESTRAL SPECIES	66	ENSGT00940000155219	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00550000075117	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000163647	ENSGT00940000166021	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151
Eastern brown snake	MODERN SPECIES	27	ENSPTXG00000005864	ENSPTXG00000005865	SUGT1 (ENSPTXG00000005866)	ELF1 (ENSPTXG00000005867)	WBP4 (ENSPTXG00000005868) #7	SLC25A38 (ENSPTXG00000005869)	MTRF1 (ENSPTXG00000005870) #9	NAA16 (ENSPTXG00000005871) #10	VWA8 (ENSPTXG00000005872) #12	DGKH (ENSPTXG00000005947) #13	AKAP11 (ENSPTXG00000005952) #14	TNFSF11 (ENSPTXG00000005954) #15	DNAJC15 (ENSPTXG00000005956) #19	ENOX1 (ENSPTXG00000005958) #20	CCDC122 (ENSPTXG00000005959) #21	LACC1 (ENSPTXG00000005964) #22	ENSPTXG00000003593	ENSPTXG00000003595	GPALPP1 (ENSPTXG00000003598)	GTF2F2 (ENSPTXG00000003602) #29	KCTD4 (ENSPTXG00000003604) #30	TPT1 (ENSPTXG00000003608) #31	ENSPTXG00000003612 #34	ST3GAL5 (ENSPTXG00000003617)	FGFRL1 (ENSPTXG00000003621)
Mainland tiger snake	MODERN SPECIES	276														ENOX1 (ENSNSUG00000008456) #20	CCDC122 (ENSNSUG00000008454) #21	LACC1 (ENSNSUG00000008452) #22	ENSNSUG00000008451 #24
Blue-lipped sea krait	MODERN SPECIES	6481																LACC1 (ENSLLTG00000012117) #22
Lizard	MODERN SPECIES	1008															CCDC122 (ENSACAG00000006392) #21	LACC1 (ENSACAG00000006411) #22	ENSACAG00000006426	NUFIP1 (ENSACAG00000006461) #25	GPALPP1 (ENSACAG00000006468)	GTF2F2 (ENSACAG00000028333) #29	ENSACAG00000041591	ENSACAG00000006531 #31	ENSACAG00000006577 #34	ST3GAL5 (ENSACAG00000041638)
Laterata	ANCESTRAL SPECIES		ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00960000192339	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00940000159552 #30	ENSGT00390000016051 #29	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000156736	ENSGT00940000159900	ENSGT00940000157061.a.j	ENSGT00940000153203.B	ENSGT00940000164256	ENSGT00940000162861
Common wall lizard	MODERN SPECIES	4	ENSPMRG00000018545	ENSPMRG00000018551	ENSPMRG00000018562	ENSPMRG00000018631	ENSPMRG00000018708	ENSPMRG00000018711	ENSPMRG00000018714	ENSPMRG00000018716	ENSPMRG00000018722	ENSPMRG00000018738	ENSPMRG00000018761	ENSPMRG00000018812	COX18 (ENSPMRG00000019043)	ANKRD17 (ENSPMRG00000019148)	CCDC122 (ENSPMRG00000020054) #21	LACC1 (ENSPMRG00000020062) #22	ENSPMRG00000020067	CCR10 (ENSPMRG00000020072)	CNTNAP1 (ENSPMRG00000020081)	EZH1 (ENSPMRG00000020116)	ENSPMRG00000020181	ENSPMRG00000020187	ENSPMRG00000020194	VPS25 (ENSPMRG00000020213)	ENSPMRG00000020220	ENSPMRG00000011231	CNTD1 (ENSPMRG00000011237)	ENSPMRG00000011248	PSME3 (ENSPMRG00000011261)	ENSPMRG00000011269	ENSPMRG00000011274
Argentine black and white tegu	MODERN SPECIES	44	WBP4 (ENSSMRG00000022988) #7	MTRF1 (ENSSMRG00000022986) #9	NAA16 (ENSSMRG00000022985) #10	RGCC (ENSSMRG00000022984) #11	VWA8 (ENSSMRG00000022816) #12	ENSSMRG00000022814	DGKH (ENSSMRG00000022813) #13	AKAP11 (ENSSMRG00000022812) #14	TNFSF11 (ENSSMRG00000022811) #15	ENSSMRG00000022810	EPSTI1 (ENSSMRG00000022808) #18	DNAJC15 (ENSSMRG00000022807) #19	ENSSMRG00000022806	ENOX1 (ENSSMRG00000022804) #20	CCDC122 (ENSSMRG00000022803) #21	LACC1 (ENSSMRG00000022802) #22	ENSSMRG00000022801	NUFIP1 (ENSSMRG00000022800) #25	GPALPP1 (ENSSMRG00000022799)	KCTD4 (ENSSMRG00000022798) #30	GTF2F2 (ENSSMRG00000022797) #29	TPT1 (ENSSMRG00000022795) #31	ENSSMRG00000022794 #34	ST3GAL5 (ENSSMRG00000022793)	ATOH8 (ENSSMRG00000022792)	FGFRL1 (ENSSMRG00000022790)	SPON2 (ENSSMRG00000022788)	CTBP1 (ENSSMRG00000022787)	MAEA (ENSSMRG00000022785)	ENSSMRG00000022784	NKX1-1 (ENSSMRG00000022783)
tuatara	MODERN SPECIES	1434														ENOX1 (ENSSPUG00000016115) #20	CCDC122 (ENSSPUG00000016103) #21	LACC1 (ENSSPUG00000016033) #22	ENSSPUG00000015999
Anura	ANCESTRAL SPECIES	3	ENSGT00940000157039.b	ENSGT00390000013956 #7	ENSGT00990000203769	ENSGT00940000164962	ENSGT00940000156877 #9	ENSGT00950000183174.B.b #10	ENSGT00390000011709 #11	ENSGT00390000006601 #12	ENSGT00940000158106 #13	ENSGT00940000153313.B #14	ENSGT01070000253816.a.a.b #15	ENSGT00390000013820 #18	ENSGT00940000159907 #19	ENSGT00390000006788.a.b #20	ENSGT00390000005130 #21	ENSGT00390000000693 #22	ENSGT00940000162467.b #23	ENSGT00940000166021	ENSGT00390000003758 #25	ENSGT00940000163575	ENSGT00390000016051 #29	ENSGT00940000159552 #30	ENSGT00390000006051 #31	ENSGT00940000158961 #34	ENSGT00390000015682 #35	ENSGT00940000153655.A.a	ENSGT00940000161772 #37	ENSGT00730000111163	ENSGT00940000159160	ENSGT01050000244888.b.a.c.a.t	ENSGT00950000183097.a.a.b
Leishan spiny toad	MODERN SPECIES	5	AKAP11 (ENSLLEG00000019042) #14	ENSLLEG00000019224	ENSLLEG00000019241	TNFSF11 (ENSLLEG00000019255) #15	EPSTI1 (ENSLLEG00000019302) #18	ENSLLEG00000019591	DNAJC15 (ENSLLEG00000019656) #19	ENSLLEG00000019872	ENSLLEG00000019905	ENOX1 (ENSLLEG00000019955) #20	ENSLLEG00000020672	ENSLLEG00000020687	ENSLLEG00000020709	ENSLLEG00000020757 #21	ENSLLEG00000020817	LACC1 (ENSLLEG00000020833) #22	SERP2 (ENSLLEG00000020889) #23	ENSLLEG00000020958	NUFIP1 (ENSLLEG00000021039) #25	GPALPP1 (ENSLLEG00000021140)	ENSLLEG00000021528	GTF2F2 (ENSLLEG00000021607) #29	KCTD4 (ENSLLEG00000022326) #30	TPT1 (ENSLLEG00000022362) #31	SLC25A30 (ENSLLEG00000022497) #34	COG3 (ENSLLEG00000022634) #35	ENSLLEG00000023095	ENSLLEG00000023114	ENSLLEG00000023261	SIAH3 (ENSLLEG00000023320) #37	ZC3H13 (ENSLLEG00000023396)
Frog	MODERN SPECIES	2	wbp4 (ENSXETG00000018896) #7	ENSXETG00000040356	kbtbd7 (ENSXETG00000046134)	naa16 (ENSXETG00000018897) #10	rgcc (ENSXETG00000018908) #11	vwa8 (ENSXETG00000018910) #12	dgkh (ENSXETG00000014560) #13	akap11 (ENSXETG00000014581) #14	ENSXETG00000042379	tnfsf11 (ENSXETG00000025365) #15	epsti1 (ENSXETG00000035529) #18	dnajc15 (ENSXETG00000014585) #19	enox1 (ENSXETG00000014586) #20	ENSXETG00000042617	nelfb (ENSXETG00000014774) #21	lacc1 (ENSXETG00000014775) #22	serp2 (ENSXETG00000038969) #23	tsc22d1 (ENSXETG00000033932)	nufip1 (ENSXETG00000014778) #25	gpalpp1 (ENSXETG00000042639) #26	ENSXETG00000036976	gtf2f2 (ENSXETG00000036901) #29	kctd4 (ENSXETG00000035680) #30	tpt1 (ENSXETG00000014661) #31	slc25a30 (ENSXETG00000047934) #34	cog3 (ENSXETG00000014651) #35	siah3 (ENSXETG00000036871)	ttll3 (ENSXETG00000026497)	ENSXETG00000043129	zc3h13 (ENSXETG00000014637)	cpb2 (ENSXETG00000026124)
Coelacanth	MODERN SPECIES	1875															CCDC122 (ENSLACG00000008677) #21	LACC1 (ENSLACG00000007803) #22	ENSLACG00000005994