Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Glires	ANCESTRAL SPECIES	13	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A.f #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Hystricomorpha_a	ANCESTRAL SPECIES	35	ENSGT00940000156983.a.a #7	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A.f #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Guinea pig	MODERN SPECIES	48	BCL11A (ENSCPOG00000007587) #7	PAPOLG (ENSCPOG00000010306) #8	REL (ENSCPOG00000011659) #9	PUS10 (ENSCPOG00000011670) #10	PEX13 (ENSCPOG00000034678) #11	SANBR (ENSCPOG00000004783) #12	ENSCPOG00000004791 #13	USP34 (ENSCPOG00000004796) #14	XPO1 (ENSCPOG00000034053) #15	FAM161A (ENSCPOG00000002085) #16	CCT4 (ENSCPOG00000002086) #17	COMMD1 (ENSCPOG00000002088) #18	B3GNT2 (ENSCPOG00000034379) #19	TMEM17 (ENSCPOG00000035038) #20	EHBP1 (ENSCPOG00000002001) #21	OTX1 (ENSCPOG00000004881) #22	ENSCPOG00000030520 #23	ENSCPOG00000036317 #24	MDH1 (ENSCPOG00000010755) #25	UGP2 (ENSCPOG00000008459) #26	VPS54 (ENSCPOG00000037738) #27	PELI1 (ENSCPOG00000037199) #28	LGALSL (ENSCPOG00000039657) #29	ENSCPOG00000033401 #30	SLC1A4 (ENSCPOG00000008754) #31	CEP68 (ENSCPOG00000001592) #32	RAB1A (ENSCPOG00000015437) #33	ACTR2 (ENSCPOG00000025808) #34	SPRED2 (ENSCPOG00000037272) #35
Hystricomorpha_b	ANCESTRAL SPECIES	33	ENSGT00940000156983.a.a #7	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178.g #12	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A.f #32	ENSGT00940000154958.y #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Degu	MODERN SPECIES	119	PUS10 (ENSODEG00000011720) #10	ENSODEG00000012067 #12	ENSODEG00000011830 #13	USP34 (ENSODEG00000011790) #14	ENSODEG00000020015	XPO1 (ENSODEG00000012632) #15	ENSODEG00000011466	ENSODEG00000011239	ENSODEG00000012087	ENSODEG00000012263	ENSODEG00000011618 #17	ENSODEG00000011341	B3GNT2 (ENSODEG00000011165) #19	ENSODEG00000011529 #20	EHBP1 (ENSODEG00000012259) #21	OTX1 (ENSODEG00000012071) #22	ENSODEG00000011160	ENSODEG00000011103	ENSODEG00000019821	WDPCP (ENSODEG00000011330) #23	MDH1 (ENSODEG00000011582) #25	ENSODEG00000012736	ENSODEG00000011552 #26	VPS54 (ENSODEG00000012541) #27	PELI1 (ENSODEG00000011189) #28	ENSODEG00000011901	LGALSL (ENSODEG00000011485) #29	ENSODEG00000011805 #30	SERTAD2 (ENSODEG00000011523)	SLC1A4 (ENSODEG00000011406) #31	ENSODEG00000011248 #33
Long-tailed chinchilla	MODERN SPECIES	131	BCL11A (ENSCLAG00000009184) #7	PAPOLG (ENSCLAG00000008603) #8	REL (ENSCLAG00000007490) #9	PUS10 (ENSCLAG00000011001) #10	PEX13 (ENSCLAG00000015482) #11	SANBR (ENSCLAG00000009068) #12	ENSCLAG00000007857 #13	USP34 (ENSCLAG00000010299) #14	XPO1 (ENSCLAG00000012953) #15	FAM161A (ENSCLAG00000011652) #16	CCT4 (ENSCLAG00000014321) #17	COMMD1 (ENSCLAG00000013262) #18	B3GNT2 (ENSCLAG00000013147) #19	TMEM17 (ENSCLAG00000013487) #20	EHBP1 (ENSCLAG00000007561) #21	OTX1 (ENSCLAG00000010265) #22	ENSCLAG00000008400 #23	MDH1 (ENSCLAG00000007815) #25	UGP2 (ENSCLAG00000010416) #26	VPS54 (ENSCLAG00000007366) #27	PELI1 (ENSCLAG00000006481) #28	LGALSL (ENSCLAG00000015114) #29	ENSCLAG00000012344	AFTPH (ENSCLAG00000012032) #30	SERTAD2 (ENSCLAG00000008318)	SLC1A4 (ENSCLAG00000008207) #31	CEP68 (ENSCLAG00000012193) #32	RAB1A (ENSCLAG00000014766) #33	ACTR2 (ENSCLAG00000010920) #34	SPRED2 (ENSCLAG00000011449) #35	MEIS1 (ENSCLAG00000010420)
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000046080	SANBR (ENSHGLG00000013196) #12	ENSHGLG00000019155	ENSHGLG00000019027 #13	USP34 (ENSHGLG00000003393) #14	ENSHGLG00000019983	XPO1 (ENSHGLG00000003115) #15	FAM161A (ENSHGLG00000003066) #16	ENSHGLG00000033740	ENSHGLG00000002885 #17	ENSHGLG00000046505	ENSHGLG00000035774 #18	ENSHGLG00000008287 #19	TMEM17 (ENSHGLG00000007663) #20	EHBP1 (ENSHGLG00000007334) #21	OTX1 (ENSHGLG00000007005) #22	ENSHGLG00000039651	WDPCP (ENSHGLG00000005902) #23	ENSHGLG00000034790	MDH1 (ENSHGLG00000033109) #25	UGP2 (ENSHGLG00000005211) #26	VPS54 (ENSHGLG00000004813) #27	ENSHGLG00000033380	PELI1 (ENSHGLG00000033688) #28	ENSHGLG00000035846 #29	ENSHGLG00000004286 #30	ENSHGLG00000004348	ENSHGLG00000047996	ENSHGLG00000049432	SLC1A4 (ENSHGLG00000036619) #31	ENSHGLG00000048375 ##32
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Alpin marmot	MODERN SPECIES	6	ENSMMMG00000006930 #10	PEX13 (ENSMMMG00000006925) #11	SANBR (ENSMMMG00000006843) #12	ENSMMMG00000006840	C2orf74 (ENSMMMG00000006827)	ENSMMMG00000006820 #13	USP34 (ENSMMMG00000006722) #14	XPO1 (ENSMMMG00000006603) #15	ENSMMMG00000006598	ENSMMMG00000006583 #16	CCT4 (ENSMMMG00000006543) #17	ENSMMMG00000006529 #18	B3GNT2 (ENSMMMG00000006495) #19	TMEM17 (ENSMMMG00000006473) #20	EHBP1 (ENSMMMG00000006363) #21	OTX1 (ENSMMMG00000006353) #22	WDPCP (ENSMMMG00000006330) #23	MDH1 (ENSMMMG00000006303) #25	ENSMMMG00000006286	UGP2 (ENSMMMG00000006263) #26	VPS54 (ENSMMMG00000006188) #27	PELI1 (ENSMMMG00000006175) #28	LGALSL (ENSMMMG00000006152) #29	AFTPH (ENSMMMG00000006097) #30	ENSMMMG00000006048	ENSMMMG00000006042	SLC1A4 (ENSMMMG00000006026) #31	CEP68 (ENSMMMG00000005980) #32	RAB1A (ENSMMMG00000005929) #33	ACTR2 (ENSMMMG00000005910) #34	ENSMMMG00000005906
Marmotini_b	ANCESTRAL SPECIES	44	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000154451.s	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029.m #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00960000190724	ENSGT00940000156841 #35
Squirrel	MODERN SPECIES	91	PEX13 (ENSSTOG00000005864) #11	SANBR (ENSSTOG00000005893) #12	ENSSTOG00000029668	C2orf74 (ENSSTOG00000026908)	ENSSTOG00000007718 #13	USP34 (ENSSTOG00000007744) #14	ENSSTOG00000020670	XPO1 (ENSSTOG00000016122) #15	ENSSTOG00000028618	FAM161A (ENSSTOG00000026146) #16	CCT4 (ENSSTOG00000014911) #17	COMMD1 (ENSSTOG00000015062) #18	B3GNT2 (ENSSTOG00000015068) #19	TMEM17 (ENSSTOG00000009462) #20	EHBP1 (ENSSTOG00000020225) #21	OTX1 (ENSSTOG00000025219) #22	WDPCP (ENSSTOG00000014213) #23	MDH1 (ENSSTOG00000014227) #25	ENSSTOG00000023912	UGP2 (ENSSTOG00000000789) #26	VPS54 (ENSSTOG00000023517) #27	PELI1 (ENSSTOG00000026315) #28	LGALSL (ENSSTOG00000024204) #29	AFTPH (ENSSTOG00000020828) #30	ENSSTOG00000030042	SERTAD2 (ENSSTOG00000008454)	SLC1A4 (ENSSTOG00000025160) #31	CEP68 (ENSSTOG00000011479) #32	ENSSTOG00000020693 #33	ACTR2 (ENSSTOG00000012608) #34	SPRED2 (ENSSTOG00000022318) #35
Arctic ground squirrel	MODERN SPECIES	47	REL (ENSUPAG00010011621) #9	PUS10 (ENSUPAG00010011569) #10	PEX13 (ENSUPAG00010011557) #11	SANBR (ENSUPAG00010011475) #12	C2orf74 (ENSUPAG00010011464)	ENSUPAG00010011445 #13	USP34 (ENSUPAG00010011360) #14	XPO1 (ENSUPAG00010011307) #15	ENSUPAG00010011301	FAM161A (ENSUPAG00010011296) #16	CCT4 (ENSUPAG00010011275) #17	ENSUPAG00010011263 #18	B3GNT2 (ENSUPAG00010011255) #19	TMEM17 (ENSUPAG00010011243) #20	EHBP1 (ENSUPAG00010011097) #21	OTX1 (ENSUPAG00010011094) #22	WDPCP (ENSUPAG00010011061) #23	MDH1 (ENSUPAG00010011052) #25	UGP2 (ENSUPAG00010011000) #26	VPS54 (ENSUPAG00010010962) #27	PELI1 (ENSUPAG00010010945) #28	LGALSL (ENSUPAG00010010929) #29	AFTPH (ENSUPAG00010010843) #30	SERTAD2 (ENSUPAG00010010839)	ENSUPAG00010010837	SLC1A4 (ENSUPAG00010010829) #31	CEP68 (ENSUPAG00010010822) #32	RAB1A (ENSUPAG00010010773) #33	ACTR2 (ENSUPAG00010010750) #34	ENSUPAG00010010742	SPRED2 (ENSUPAG00010010724) #35
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005023624	ENSSVLG00005023593 #13	USP34 (ENSSVLG00005023531) #14	XPO1 (ENSSVLG00005023207) #15	ENSSVLG00005023491 #15	ENSSVLG00005023117	ENSSVLG00005023092	FAM161A (ENSSVLG00005023008) #16	CCT4 (ENSSVLG00005022942) #17	CRIPT (ENSSVLG00005022896)	ENSSVLG00005022859 #18	ENSSVLG00005022821	B3GNT2 (ENSSVLG00005022804) #19	TMEM17 (ENSSVLG00005022771) #20	EHBP1 (ENSSVLG00005022645) #21	OTX1 (ENSSVLG00005022587) #22	WDPCP (ENSSVLG00005022261) #23	MDH1 (ENSSVLG00005022103) #25	UGP2 (ENSSVLG00005021917) #26	VPS54 (ENSSVLG00005021631) #27	PELI1 (ENSSVLG00005021561) #28	LGALSL (ENSSVLG00005021478) #29	ENSSVLG00005021416 #30	SERTAD2 (ENSSVLG00005021387)	SLC1A4 (ENSSVLG00005021330) #31	ENSSVLG00005021277	ENSSVLG00005021243	ENSSVLG00005021194	TMSB10 (ENSSVLG00005021149)	ENSSVLG00005021102	DNAH6 (ENSSVLG00005019791)
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Prairie vole	MODERN SPECIES	92	ENSMOCG00000000119	ENSMOCG00000012151	ENSMOCG00000002753 #12	ENSMOCG00000011390 #12	1700093K21Rik (ENSMOCG00000014054)	ENSMOCG00000017180 #13	Usp34 (ENSMOCG00000002256) #14	Xpo1 (ENSMOCG00000012169) #15	ENSMOCG00000018790	ENSMOCG00000016877 #16	Cct4 (ENSMOCG00000011789) #17	Commd1 (ENSMOCG00000006391) #18	B3gnt2 (ENSMOCG00000000086) #19	Tmem17 (ENSMOCG00000015494) #20	Ehbp1 (ENSMOCG00000007287) #21	Otx1 (ENSMOCG00000014191) #22	Wdpcp (ENSMOCG00000003579) #23	Mdh1 (ENSMOCG00000015448) #25	Ugp2 (ENSMOCG00000009715) #26	Vps54 (ENSMOCG00000009563) #27	Peli1 (ENSMOCG00000016437) #28	Gm5065 (ENSMOCG00000014300) #29	ENSMOCG00000003932	Aftph (ENSMOCG00000015081) #30	Sertad2 (ENSMOCG00000002173)	Slc1a4 (ENSMOCG00000001173) #31	Cep68 (ENSMOCG00000003444) #32	Rab1a (ENSMOCG00000017022) #33	Actr2 (ENSMOCG00000008248) #34	Spred2 (ENSMOCG00000014005) #35	Meis1 (ENSMOCG00000016359)
Northern American deer mouse	MODERN SPECIES	1	Pus10 (ENSPEMG00000013145) #10	Pex13 (ENSPEMG00000018236) #11	Sanbr (ENSPEMG00000002385) #12	1700093K21Rik (ENSPEMG00000004943)	Ahsa2 (ENSPEMG00000008242) #13	Usp34 (ENSPEMG00000013241) #14	Xpo1 (ENSPEMG00000010103) #15	ENSPEMG00000011408 #16	Cct4 (ENSPEMG00000014381) #17	Commd1 (ENSPEMG00000008857) #18	ENSPEMG00000013373	B3gnt2 (ENSPEMG00000030694) #19	ENSPEMG00000029232	Tmem17 (ENSPEMG00000012666) #20	Ehbp1 (ENSPEMG00000014061) #21	Otx1 (ENSPEMG00000027636) #22	Wdpcp (ENSPEMG00000016341) #23	Mdh1 (ENSPEMG00000007456) #25	Ugp2 (ENSPEMG00000010268) #26	Vps54 (ENSPEMG00000012405) #27	Peli1 (ENSPEMG00000030617) #28	ENSPEMG00000015267 #29	Aftph (ENSPEMG00000010156) #30	Sertad2 (ENSPEMG00000027852)	ENSPEMG00000016241	Slc1a4 (ENSPEMG00000018063) #31	Cep68 (ENSPEMG00000002161) #32	Rab1a (ENSPEMG00000009340) #33	ENSPEMG00000025517	Actr2 (ENSPEMG00000015727) #34	Spred2 (ENSPEMG00000029042) #35
Cricetinae	ANCESTRAL SPECIES	37	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327
Chinese hamster chok1gshd	MODERN SPECIES	121	Pus10 (ENSCGRG00001015226) #10	Pex13 (ENSCGRG00001006134) #11	Sanbr (ENSCGRG00001018010) #12	1700093K21Rik (ENSCGRG00001014409)	Ahsa2 (ENSCGRG00001004669) #13	Usp34 (ENSCGRG00001006322) #14	Xpo1 (ENSCGRG00001000263) #15	ENSCGRG00001013463 #16	Cct4 (ENSCGRG00001016718) #17	ENSCGRG00001007132	Commd1 (ENSCGRG00001007842) #18	B3gnt2 (ENSCGRG00001005196) #19	ENSCGRG00001025059	Tmem17 (ENSCGRG00001024384) #20	Ehbp1 (ENSCGRG00001022633) #21	Otx1 (ENSCGRG00001017328) #22	Wdpcp (ENSCGRG00001012886) #23	ENSCGRG00001023990	Mdh1 (ENSCGRG00001021102) #25	UGP2 (ENSCGRG00001012845) #26	Vps54 (ENSCGRG00001009286) #27	Peli1 (ENSCGRG00001021958) #28	Gm5065 (ENSCGRG00001013868) #29	ENSCGRG00001009126	Aftph (ENSCGRG00001016162) #30	Sertad2 (ENSCGRG00001009657)	ENSCGRG00001005474	Slc1a4 (ENSCGRG00001017715) #31	Cep68 (ENSCGRG00001014327) #32	ENSCGRG00001012691 #33	ENSCGRG00001017243 #34
Golden Hamster	MODERN SPECIES	639	Papolg (ENSMAUG00000009088) #8	Rel (ENSMAUG00000020172) #9	Pus10 (ENSMAUG00000007507) #10	ENSMAUG00000009603 #11	ENSMAUG00000007138 #12	1700093K21Rik (ENSMAUG00000002621)	Ahsa2 (ENSMAUG00000019192) #13	Usp34 (ENSMAUG00000015413) #14	Xpo1 (ENSMAUG00000006769) #15	ENSMAUG00000012775 #16	Cct4 (ENSMAUG00000000518) #17	Commd1 (ENSMAUG00000010569) #18	B3gnt2 (ENSMAUG00000002963) #19	Tmem17 (ENSMAUG00000003448) #20	Ehbp1 (ENSMAUG00000000935) #21	Otx1 (ENSMAUG00000019114) #22	Wdpcp (ENSMAUG00000011349) #23	ENSMAUG00000012018	Mdh1 (ENSMAUG00000018086) #25	ENSMAUG00000012689 #26	Vps54 (ENSMAUG00000010788) #27	Peli1 (ENSMAUG00000012937) #28	ENSMAUG00000015033 #29	Aftph (ENSMAUG00000016557) #30	Sertad2 (ENSMAUG00000004242)	Slc1a4 (ENSMAUG00000019775) #31	Cep68 (ENSMAUG00000014820) #32	Rab1a (ENSMAUG00000012156) #33	Actr2 (ENSMAUG00000008458) #34	Spred2 (ENSMAUG00000013657) #35	Meis1 (ENSMAUG00000001130)
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183152.A	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Mus	ANCESTRAL SPECIES	14	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183152.A	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183152.A	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183152.A	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183152.A	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Steppe mouse	MODERN SPECIES	3019				Xpo1 (ENSMSIG00000031855) #15	ENSMSIG00000031860	ENSMSIG00000031862 #16	Cct4 (ENSMSIG00000031863) #17	ENSMSIG00000031865	Commd1 (ENSMSIG00000031866) #18	ENSMSIG00000031867	B3gnt2 (ENSMSIG00000031870) #19	ENSMSIG00000031871	ENSMSIG00000031872	Tmem17 (ENSMSIG00000031873) #20	Ehbp1 (ENSMSIG00000031874) #21	Otx1 (ENSMSIG00000031875) #22	Wdpcp (ENSMSIG00000031876) #23	Mdh1 (ENSMSIG00000031877) #25	ENSMSIG00000031878	ENSMSIG00000031879
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0016984 #11	Sanbr (MGP_SPRETEiJ_G0016983) #12	1700093K21Rik (MGP_SPRETEiJ_G0016982)	Ahsa2 (MGP_SPRETEiJ_G0016981) #13	Usp34 (MGP_SPRETEiJ_G0016980) #14	Xpo1 (MGP_SPRETEiJ_G0016979) #15	MGP_SPRETEiJ_G0016978 #16	Cct4 (MGP_SPRETEiJ_G0016977) #17	MGP_SPRETEiJ_G0016976	Commd1 (MGP_SPRETEiJ_G0016975) #18	MGP_SPRETEiJ_G0016974 #18	B3gnt2 (MGP_SPRETEiJ_G0016973) #19	MGP_SPRETEiJ_G0016972	Tmem17 (MGP_SPRETEiJ_G0016971) #20	Ehbp1 (MGP_SPRETEiJ_G0016970) #21	Otx1 (MGP_SPRETEiJ_G0016969) #22	Wdpcp (MGP_SPRETEiJ_G0016968) #23	Mdh1 (MGP_SPRETEiJ_G0016967) #25	Ugp2 (MGP_SPRETEiJ_G0016966) #26	Vps54 (MGP_SPRETEiJ_G0016965) #27	Peli1 (MGP_SPRETEiJ_G0016964) #28	Lgalsl (MGP_SPRETEiJ_G0016963) #29	Aftph (MGP_SPRETEiJ_G0016962) #30	Sertad2 (MGP_SPRETEiJ_G0016961)	Slc1a4 (MGP_SPRETEiJ_G0016960) #31	Cep68 (MGP_SPRETEiJ_G0016959) #32	Rab1a (MGP_SPRETEiJ_G0016958) #33	Actr2 (MGP_SPRETEiJ_G0016957) #34	Spred2 (MGP_SPRETEiJ_G0016956) #35	Asb12 (MGP_SPRETEiJ_G0016955)	Meis1 (MGP_SPRETEiJ_G0016954)
Mouse	MODERN SPECIES	2	Rel (ENSMUSG00000020275) #9	Pus10 (ENSMUSG00000020280) #10	Pex13 (ENSMUSG00000020283) #11	Sanbr (ENSMUSG00000042208) #12	1700093K21Rik (ENSMUSG00000020286)	Ahsa2 (ENSMUSG00000020288) #13	Usp34 (ENSMUSG00000056342) #14	Xpo1 (ENSMUSG00000020290) #15	Fam161a (ENSMUSG00000049811) #16	Cct4 (ENSMUSG00000007739) #17	Commd1 (ENSMUSG00000051355) #18	Commd1b (ENSMUSG00000098650)	B3gnt2 (ENSMUSG00000051650) #19	Tmem17 (ENSMUSG00000049904) #20	Ehbp1 (ENSMUSG00000042302) #21	Otx1 (ENSMUSG00000005917) #22	Wdpcp (ENSMUSG00000020319) #23	Mdh1 (ENSMUSG00000020321) #25	Ugp2 (ENSMUSG00000001891) #26	Vps54 (ENSMUSG00000020128) #27	Peli1 (ENSMUSG00000020134) #28	Lgalsl (ENSMUSG00000042363) #29	Aftph (ENSMUSG00000049659) #30	Sertad2 (ENSMUSG00000049800)	Slc1a4 (ENSMUSG00000020142) #31	Cep68 (ENSMUSG00000044066) #32	Rab1a (ENSMUSG00000020149) #33	Actr2 (ENSMUSG00000020152) #34	Spred2 (ENSMUSG00000045671) #35	Meis1 (ENSMUSG00000020160)	Etaa1 (ENSMUSG00000016984)
Ryukyu mouse	MODERN SPECIES	2	Pex13 (MGP_CAROLIEiJ_G0016141) #11	Sanbr (MGP_CAROLIEiJ_G0016140) #12	1700093K21Rik (MGP_CAROLIEiJ_G0016139)	Ahsa2 (MGP_CAROLIEiJ_G0016138) #13	Usp34 (MGP_CAROLIEiJ_G0016137) #14	Xpo1 (MGP_CAROLIEiJ_G0016136) #15	MGP_CAROLIEiJ_G0016135 #16	Cct4 (MGP_CAROLIEiJ_G0016134) #17	MGP_CAROLIEiJ_G0016133	MGP_CAROLIEiJ_G0016132 #18	B3gnt2 (MGP_CAROLIEiJ_G0016131) #19	MGP_CAROLIEiJ_G0016130 #18	MGP_CAROLIEiJ_G0016129	Tmem17 (MGP_CAROLIEiJ_G0016128) #20	Ehbp1 (MGP_CAROLIEiJ_G0016127) #21	Otx1 (MGP_CAROLIEiJ_G0016126) #22	Wdpcp (MGP_CAROLIEiJ_G0016125) #23	Mdh1 (MGP_CAROLIEiJ_G0016124) #25	Ugp2 (MGP_CAROLIEiJ_G0016123) #26	Vps54 (MGP_CAROLIEiJ_G0016122) #27	Peli1 (MGP_CAROLIEiJ_G0016121) #28	Gm5065 (MGP_CAROLIEiJ_G0016120) #29	Aftph (MGP_CAROLIEiJ_G0016119) #30	Sertad2 (MGP_CAROLIEiJ_G0016118)	Slc1a4 (MGP_CAROLIEiJ_G0016117) #31	Cep68 (MGP_CAROLIEiJ_G0016116) #32	Rab1a (MGP_CAROLIEiJ_G0016115) #33	Actr2 (MGP_CAROLIEiJ_G0016114) #34	Spred2 (MGP_CAROLIEiJ_G0016113) #35	Meis1 (MGP_CAROLIEiJ_G0016112)	Etaa1 (MGP_CAROLIEiJ_G0016111)
Shrew mouse	MODERN SPECIES	4	Pex13 (MGP_PahariEiJ_G0016749) #11	Sanbr (MGP_PahariEiJ_G0016750) #12	1700093K21Rik (MGP_PahariEiJ_G0016751)	Ahsa2 (MGP_PahariEiJ_G0016752) #13	MGP_PahariEiJ_G0016753 #14	Xpo1 (MGP_PahariEiJ_G0016754) #15	MGP_PahariEiJ_G0016755 #16	Cct4 (MGP_PahariEiJ_G0016756) #17	Commd1 (MGP_PahariEiJ_G0016757) #18	MGP_PahariEiJ_G0016758 #18	MGP_PahariEiJ_G0016759	B3gnt2 (MGP_PahariEiJ_G0016760) #19	MGP_PahariEiJ_G0016761	Tmem17 (MGP_PahariEiJ_G0016762) #20	Ehbp1 (MGP_PahariEiJ_G0016763) #21	Otx1 (MGP_PahariEiJ_G0016764) #22	MGP_PahariEiJ_G0016765 #23	Mdh1 (MGP_PahariEiJ_G0016766) #25	Ugp2 (MGP_PahariEiJ_G0016767) #26	Vps54 (MGP_PahariEiJ_G0016768) #27	Peli1 (MGP_PahariEiJ_G0016769) #28	MGP_PahariEiJ_G0016770 #29	Lgalsl (MGP_PahariEiJ_G0016771) #29	Aftph (MGP_PahariEiJ_G0016772) #30	Sertad2 (MGP_PahariEiJ_G0016773)	Slc1a4 (MGP_PahariEiJ_G0016774) #31	Cep68 (MGP_PahariEiJ_G0016775) #32	Rab1a (MGP_PahariEiJ_G0016776) #33	Actr2 (MGP_PahariEiJ_G0016777) #34	Spred2 (MGP_PahariEiJ_G0016778) #35	Meis1 (MGP_PahariEiJ_G0016779)
Rat	MODERN SPECIES	5	Sanbr (ENSRNOG00000054669) #12	C14h2orf74 (ENSRNOG00000051590)	Ahsa2 (ENSRNOG00000052142) #13	LOC108352814 (ENSRNOG00000071093)	Usp34 (ENSRNOG00000051889) #14	Xpo1 (ENSRNOG00000009935) #15	Fam161a (ENSRNOG00000009881) #16	Cct4 (ENSRNOG00000009642) #17	Zrsr2-ps1 (ENSRNOG00000009639)	Commd1 (ENSRNOG00000009281) #18	B3gnt2 (ENSRNOG00000009267) #19	LOC100361636 (ENSRNOG00000033346)	AABR07016623.1 (ENSRNOG00000009240)	Tmem17 (ENSRNOG00000009220) #20	Ehbp1 (ENSRNOG00000008917) #21	Otx1 (ENSRNOG00000065081) #22	ENSRNOG00000065408	Wdpcp (ENSRNOG00000054331) #23	Mdh1 (ENSRNOG00000008103) #25	Ugp2 (ENSRNOG00000008079) #26	Vps54 (ENSRNOG00000007125) #27	Peli1 (ENSRNOG00000006329) #28	LOC108352809 (ENSRNOG00000042277)	Lgalsl (ENSRNOG00000005464) #29	LOC108352861 (ENSRNOG00000029052)	Aftph (ENSRNOG00000005411) #30	Sertad2 (ENSRNOG00000005393)	Slc1a4 (ENSRNOG00000005248) #31	Cep68 (ENSRNOG00000027282) #32	Rab1a (ENSRNOG00000004992) #33	Rpl38 (ENSRNOG00000033686)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1542															Ehbp1 (ENSNGAG00000022543) #21	Otx1 (ENSNGAG00000023167) #22	Wdpcp (ENSNGAG00000022039) #23	ENSNGAG00000016412	Mdh1 (ENSNGAG00000022959) #25	Ugp2 (ENSNGAG00000014716) #26	Vps54 (ENSNGAG00000019724) #27	Peli1 (ENSNGAG00000014256) #28	ENSNGAG00000017298 #29	Aftph (ENSNGAG00000022259) #30	ENSNGAG00000010686	Sertad2 (ENSNGAG00000019290)	Slc1a4 (ENSNGAG00000022015) #31	Cep68 (ENSNGAG00000024137) #32	Rab1a (ENSNGAG00000005838) #33
Lesser Egyptian jerboa	MODERN SPECIES	74	Cebpzos (ENSJJAG00000016694)	ENSJJAG00000015000	Gpatch11 (ENSJJAG00000015127)	Heatr5b (ENSJJAG00000016395)	Strn (ENSJJAG00000022124)	Vit (ENSJJAG00000000898)	Fez2 (ENSJJAG00000024083)	Crim1 (ENSJJAG00000006651)	Fam98a (ENSJJAG00000012732)	Rasgrp3 (ENSJJAG00000021552)	ENSJJAG00000003107 #17	Commd1 (ENSJJAG00000006007) #18	B3gnt2 (ENSJJAG00000007561) #19	Tmem17 (ENSJJAG00000007029) #20	Ehbp1 (ENSJJAG00000023917) #21	Otx1 (ENSJJAG00000011287) #22	ENSJJAG00000015148 #23	ENSJJAG00000014833 #23	Mdh1 (ENSJJAG00000024369) #25	Ugp2 (ENSJJAG00000014432) #26	Vps54 (ENSJJAG00000012401) #27	Peli1 (ENSJJAG00000000296) #28	Gm5065 (ENSJJAG00000016772) #29	ENSJJAG00000020384 #30	Sertad2 (ENSJJAG00000015989)	Slc1a4 (ENSJJAG00000002418) #31	Cep68 (ENSJJAG00000016421) #32	Rab1a (ENSJJAG00000014396) #33	Actr2 (ENSJJAG00000008642) #34	Spred2 (ENSJJAG00000020977) #35	Meis1 (ENSJJAG00000015459)
Kangaroo rat	MODERN SPECIES	382	Pus10 (ENSDORG00000005550) #10	Pex13 (ENSDORG00000009725) #11	ENSDORG00000011221 #12	ENSDORG00000011227	Ahsa2 (ENSDORG00000012061) #13	Usp34 (ENSDORG00000012062) #14	Xpo1 (ENSDORG00000013050) #15	ENSDORG00000026102 #16	Cct4 (ENSDORG00000002542) #17	Commd1 (ENSDORG00000001166) #18	ENSDORG00000027292	B3gnt2 (ENSDORG00000024683) #19	Tmem17 (ENSDORG00000024954) #20	Ehbp1 (ENSDORG00000002628) #21	ENSDORG00000023858	Otx1 (ENSDORG00000024553) #22	Wdpcp (ENSDORG00000003329) #23	ENSDORG00000009021	Mdh1 (ENSDORG00000000099) #25	Rasl2-9 (ENSDORG00000027038)	Ugp2 (ENSDORG00000013164) #26	Vps54 (ENSDORG00000009782) #27	Peli1 (ENSDORG00000025404) #28	ENSDORG00000027919 #29	ENSDORG00000004159 #30	ENSDORG00000027058	Sertad2 (ENSDORG00000025954)	Slc1a4 (ENSDORG00000002394) #31	Cep68 (ENSDORG00000002111) #32	ENSDORG00000028628 #33	Actr2 (ENSDORG00000001487) #34
Lagomorpha	ANCESTRAL SPECIES	10	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824.c #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556.lb.a #34	ENSGT00940000156841 #35	ENSGT00940000156327	ENSGT00390000009597
Rabbit	MODERN SPECIES	11	REL (ENSOCUG00000004968) #9	PUS10 (ENSOCUG00000007867) #10	PEX13 (ENSOCUG00000007894) #11	SANBR (ENSOCUG00000009559) #12	C2orf74 (ENSOCUG00000029395)	ENSOCUG00000017817 #13	USP34 (ENSOCUG00000017819) #14	XPO1 (ENSOCUG00000004986) #15	ENSOCUG00000000707 #16	CCT4 (ENSOCUG00000024386) #17	COMMD1 (ENSOCUG00000001093) #18	B3GNT2 (ENSOCUG00000017281) #19	TMEM17 (ENSOCUG00000010487) #20	ENSOCUG00000037865	EHBP1 (ENSOCUG00000013563) #21	OTX1 (ENSOCUG00000021773) #22	WDPCP (ENSOCUG00000006156) #23	MDH1 (ENSOCUG00000006166) #25	ENSOCUG00000002137 #26	VPS54 (ENSOCUG00000002143) #27	PELI1 (ENSOCUG00000027961) #28	ENSOCUG00000031191	LGALSL (ENSOCUG00000013957) #29	AFTPH (ENSOCUG00000006390) #30	SERTAD2 (ENSOCUG00000008192)	ENSOCUG00000010821 #31	CEP68 (ENSOCUG00000016996) #32	RAB1A (ENSOCUG00000017003) #33	ACTR2 (ENSOCUG00000004906) #34	SPRED2 (ENSOCUG00000004913) #35	ENSOCUG00000034052
Tree shrew	MODERN SPECIES	619															EHBP1 (ENSTBEG00000013762) #21	OTX1 (ENSTBEG00000013901) #22
Primates	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556 #34	ENSGT00910000147214	ENSGT00940000156841 #35
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000158732 #9	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00910000147214	ENSGT00940000156841 #35
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000158732 #9	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00910000147214
Hominidae	ANCESTRAL SPECIES	19	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183099.u.a.d.b.c.a.b.b	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00910000147214
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00950000183099.u.a.d.b.c.a.b.b	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00390000010721.a.a.a.b	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a.a.a #34
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000158732 #9	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00390000010721.a.a.a.b	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a.a.a #34	ENSGT00910000147214
Pan	ANCESTRAL SPECIES	17	ENSGT00940000158732 #9	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00390000010721.a.a.a.b	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a.a.a #34	ENSGT00910000147214
Chimpanzee	MODERN SPECIES	14	PUS10 (ENSPTRG00000011951) #10	PEX13 (ENSPTRG00000011952) #11	SANBR (ENSPTRG00000011954) #12	C2AH2orf74 (ENSPTRG00000033941)	ENSPTRG00000023268 #13	ENSPTRG00000050629 #13	USP34 (ENSPTRG00000011959) #14	XPO1 (ENSPTRG00000011962) #15	FAM161A (ENSPTRG00000011964) #16	CCT4 (ENSPTRG00000011965) #17	COMMD1 (ENSPTRG00000011966) #18	ENSPTRG00000045695	B3GNT2 (ENSPTRG00000051560) #19	TMEM17 (ENSPTRG00000011968) #20	EHBP1 (ENSPTRG00000011969) #21	OTX1 (ENSPTRG00000011972) #22	WDPCP (ENSPTRG00000024270) #23	MDH1 (ENSPTRG00000011974) #25	ENSPTRG00000046466	ENSPTRG00000048626	UGP2 (ENSPTRG00000011976) #26	VPS54 (ENSPTRG00000011978) #27	PELI1 (ENSPTRG00000023869) #28	LGALSL (ENSPTRG00000047293) #29	AFTPH (ENSPTRG00000011983) #30	ENSPTRG00000045952	SERTAD2 (ENSPTRG00000030469)	SLC1A4 (ENSPTRG00000011985) #31	CEP68 (ENSPTRG00000011988) #32	RAB1A (ENSPTRG00000011989) #33	ENSPTRG00000011990 #34
Bonobo	MODERN SPECIES	14	ENSPPAG00000036115	PUS10 (ENSPPAG00000026137) #10	PEX13 (ENSPPAG00000028208) #11	SANBR (ENSPPAG00000028445) #12	C2orf74 (ENSPPAG00000027440)	ENSPPAG00000038853 #13	ENSPPAG00000040060 #13	USP34 (ENSPPAG00000031846) #14	XPO1 (ENSPPAG00000029699) #15	FAM161A (ENSPPAG00000037442) #16	CCT4 (ENSPPAG00000036821) #17	COMMD1 (ENSPPAG00000043574) #18	B3GNT2 (ENSPPAG00000024510) #19	TMEM17 (ENSPPAG00000011687) #20	EHBP1 (ENSPPAG00000043965) #21	OTX1 (ENSPPAG00000028464) #22	WDPCP (ENSPPAG00000032819) #23	MDH1 (ENSPPAG00000042469) #25	ENSPPAG00000032238	UGP2 (ENSPPAG00000038898) #26	VPS54 (ENSPPAG00000028874) #27	PELI1 (ENSPPAG00000044117) #28	LGALSL (ENSPPAG00000039473) #29	AFTPH (ENSPPAG00000028223) #30	ENSPPAG00000031785	SERTAD2 (ENSPPAG00000033136)	SLC1A4 (ENSPPAG00000041051) #31	CEP68 (ENSPPAG00000026445) #32	RAB1A (ENSPPAG00000030253) #33	ENSPPAG00000030634 #34	ENSPPAG00000026570
Human	MODERN SPECIES	11	BCL11A (ENSG00000119866) #7	PAPOLG (ENSG00000115421) #8	REL (ENSG00000162924) #9	PUS10 (ENSG00000162927) #10	PEX13 (ENSG00000162928) #11	SANBR (ENSG00000162929) #12	C2orf74 (ENSG00000237651)	USP34 (ENSG00000115464) #14	XPO1 (ENSG00000082898) #15	FAM161A (ENSG00000170264) #16	CCT4 (ENSG00000115484) #17	COMMD1 (ENSG00000173163) #18	B3GNT2 (ENSG00000170340) #19	TMEM17 (ENSG00000186889) #20	EHBP1 (ENSG00000115504) #21	OTX1 (ENSG00000115507) #22	WDPCP (ENSG00000143951) #23	MDH1 (ENSG00000014641) #25	UGP2 (ENSG00000169764) #26	VPS54 (ENSG00000143952) #27	PELI1 (ENSG00000197329) #28	LGALSL (ENSG00000119862) #29	AFTPH (ENSG00000119844) #30	SERTAD2 (ENSG00000179833)	SLC1A4 (ENSG00000115902) #31	CEP68 (ENSG00000011523) #32	RAB1A (ENSG00000138069) #33	ACTR2 (ENSG00000138071) #34	SPRED2 (ENSG00000198369) #35	MEIS1 (ENSG00000143995)	ETAA1 (ENSG00000143971)
Gorilla	MODERN SPECIES	14	PUS10 (ENSGGOG00000026131) #10	PEX13 (ENSGGOG00000006620) #11	SANBR (ENSGGOG00000024214) #12	C2orf74 (ENSGGOG00000023058)	ENSGGOG00000014565 #13	ENSGGOG00000037807 #13	USP34 (ENSGGOG00000014575) #14	XPO1 (ENSGGOG00000034878) #15	FAM161A (ENSGGOG00000013942) #16	CCT4 (ENSGGOG00000007003) #17	COMMD1 (ENSGGOG00000007602) #18	RPSA (ENSGGOG00000026707)	B3GNT2 (ENSGGOG00000025266) #19	ENSGGOG00000038261	EHBP1 (ENSGGOG00000034917) #21	OTX1 (ENSGGOG00000015410) #22	WDPCP (ENSGGOG00000011930) #23	MDH1 (ENSGGOG00000007085) #25	ENSGGOG00000036456	UGP2 (ENSGGOG00000006283) #26	VPS54 (ENSGGOG00000006294) #27	PELI1 (ENSGGOG00000013460) #28	ENSGGOG00000022216	LGALSL (ENSGGOG00000006386) #29	ENSGGOG00000023155	AFTPH (ENSGGOG00000008449) #30	SLC1A4 (ENSGGOG00000011211) #31	CEP68 (ENSGGOG00000005826) #32	RAB1A (ENSGGOG00000026603) #33	ENSGGOG00000008505 #34	ENSGGOG00000041600
Orangutan	MODERN SPECIES	14	PUS10 (ENSPPYG00000012390) #10	PEX13 (ENSPPYG00000034552) #11	SANBR (ENSPPYG00000012388) #12	C2orf74 (ENSPPYG00000035727)	ENSPPYG00000036113 #13	USP34 (ENSPPYG00000012384) #14	XPO1 (ENSPPYG00000012383) #15	FAM161A (ENSPPYG00000012382) #16	CCT4 (ENSPPYG00000012381) #17	COMMD1 (ENSPPYG00000012380) #18	ENSPPYG00000019018	B3GNT2 (ENSPPYG00000012379) #19	TMEM17 (ENSPPYG00000012378) #20	EHBP1 (ENSPPYG00000012377) #21	ENSPPYG00000030010	OTX1 (ENSPPYG00000012376) #22	WDPCP (ENSPPYG00000012374) #23	MDH1 (ENSPPYG00000012373) #25	UGP2 (ENSPPYG00000012371) #26	VPS54 (ENSPPYG00000012370) #27	PELI1 (ENSPPYG00000012369) #28	LGALSL (ENSPPYG00000012366) #29	ENSPPYG00000012365	AFTPH (ENSPPYG00000012364) #30	SERTAD2 (ENSPPYG00000035823)	SLC1A4 (ENSPPYG00000041756) #31	CEP68 (ENSPPYG00000012361) #32	RAB1A (ENSPPYG00000012360) #33	ACTR2 (ENSPPYG00000012359) #34	SPRED2 (ENSPPYG00000012358) #35	ENSPPYG00000012356
Gibbon	MODERN SPECIES	4	PUS10 (ENSNLEG00000009527) #10	PEX13 (ENSNLEG00000009552) #11	SANBR (ENSNLEG00000009560) #12	C2orf74 (ENSNLEG00000009582)	ENSNLEG00000034163 #13	ENSNLEG00000027829 #13	USP34 (ENSNLEG00000009598) #14	XPO1 (ENSNLEG00000009680) #15	FAM161A (ENSNLEG00000009719) #16	CCT4 (ENSNLEG00000009723) #17	COMMD1 (ENSNLEG00000033234) #18	B3GNT2 (ENSNLEG00000035442) #19	TMEM17 (ENSNLEG00000009759) #20	EHBP1 (ENSNLEG00000009764) #21	ENSNLEG00000027460	OTX1 (ENSNLEG00000009808) #22	WDPCP (ENSNLEG00000009810) #23	MDH1 (ENSNLEG00000009823) #25	ENSNLEG00000035245	UGP2 (ENSNLEG00000031494) #26	VPS54 (ENSNLEG00000009859) #27	PELI1 (ENSNLEG00000009891) #28	ENSNLEG00000028443	LGALSL (ENSNLEG00000031680) #29	AFTPH (ENSNLEG00000009902) #30	ENSNLEG00000009923	SERTAD2 (ENSNLEG00000029151)	SLC1A4 (ENSNLEG00000009927) #31	ENSNLEG00000009939 #32	RAB1A (ENSNLEG00000009944) #33	ACTR2 (ENSNLEG00000009948) #34
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000155413.l.a.b	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154958.mb #33	ENSGT00940000154556.tb.a #34	ENSGT00910000147398
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000155413.l.a.b	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154958.mb #33	ENSGT00940000154556.tb.a #34
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000155413.l.a.b	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00940000156841 #35
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000158732 #9	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00940000156841 #35
Pig-tailed macaque	MODERN SPECIES	341	SANBR (ENSMNEG00000041924) #12	ENSMNEG00000033482	C2orf74 (ENSMNEG00000028498)	ENSMNEG00000042228	ENSMNEG00000036948 #13	ENSMNEG00000036676 #13	USP34 (ENSMNEG00000039067) #14	XPO1 (ENSMNEG00000030909) #15	FAM161A (ENSMNEG00000031037) #16	CCT4 (ENSMNEG00000044353) #17	COMMD1 (ENSMNEG00000024928) #18	B3GNT2 (ENSMNEG00000025770) #19	TMEM17 (ENSMNEG00000040952) #20	ENSMNEG00000038346	EHBP1 (ENSMNEG00000043070) #21	OTX1 (ENSMNEG00000044308) #22	WDPCP (ENSMNEG00000030809) #23	MDH1 (ENSMNEG00000039034) #25	UGP2 (ENSMNEG00000038452) #26	VPS54 (ENSMNEG00000031281) #27	PELI1 (ENSMNEG00000030553) #28	LGALSL (ENSMNEG00000029755) #29	AFTPH (ENSMNEG00000040816) #30	ENSMNEG00000025227	SERTAD2 (ENSMNEG00000008861)	ENSMNEG00000006388	SLC1A4 (ENSMNEG00000004689) #31	CEP68 (ENSMNEG00000032212) #32	ENSMNEG00000042121 #33	ACTR2 (ENSMNEG00000044163) #34	SPRED2 (ENSMNEG00000028343) #35
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.b.a.a.a.b.b	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a.a #33	ENSGT00940000154556.tb.a #34	ENSGT00940000156841 #35
Rhesus	MODERN SPECIES	4	PEX13 (ENSMMUG00000005687) #11	SANBR (ENSMMUG00000021990) #12	C13H2orf74 (ENSMMUG00000041555)	AHSA2 (ENSMMUG00000008097) #13	USP34 (ENSMMUG00000008098) #14	XPO1 (ENSMMUG00000006941) #15	ENSMMUG00000059978	ENSMMUG00000056178	ENSMMUG00000063300	FAM161A (ENSMMUG00000013972) #16	CCT4 (ENSMMUG00000013973) #17	COMMD1 (ENSMMUG00000030824) #18	B3GNT2 (ENSMMUG00000014181) #19	TMEM17 (ENSMMUG00000057986) #20	EHBP1 (ENSMMUG00000016668) #21	OTX1 (ENSMMUG00000051405) #22	ENSMMUG00000030822	WDPCP (ENSMMUG00000003979) #23	MDH1 (ENSMMUG00000006163) #25	ENSMMUG00000060943	UGP2 (ENSMMUG00000008770) #26	VPS54 (ENSMMUG00000008772) #27	PELI1 (ENSMMUG00000059267) #28	LGALSL (ENSMMUG00000064711) #29	ENSMMUG00000006504	AFTPH (ENSMMUG00000006503) #30	ENSMMUG00000014862	SERTAD2 (ENSMMUG00000047067)	SLC1A4 (ENSMMUG00000010279) #31	CEP68 (ENSMMUG00000017019) #32	RAB1A (ENSMMUG00000021721) #33
Crab-eating macaque	MODERN SPECIES	4	C2orf74 (ENSMFAG00000034596)	ENSMFAG00000042177 #13	USP34 (ENSMFAG00000043581) #14	XPO1 (ENSMFAG00000038679) #15	ENSMFAG00000057809	ENSMFAG00000061185	ENSMFAG00000063382	FAM161A (ENSMFAG00000028707) #16	CCT4 (ENSMFAG00000031348) #17	ENSMFAG00000056305	ENSMFAG00000016016	COMMD1 (ENSMFAG00000043104) #18	B3GNT2 (ENSMFAG00000029481) #19	TMEM17 (ENSMFAG00000063543) #20	EHBP1 (ENSMFAG00000043351) #21	OTX1 (ENSMFAG00000031554) #22	ENSMFAG00000030175	WDPCP (ENSMFAG00000033390) #23	MDH1 (ENSMFAG00000042090) #25	ENSMFAG00000059450	ENSMFAG00000056658	UGP2 (ENSMFAG00000035944) #26	VPS54 (ENSMFAG00000042525) #27	PELI1 (ENSMFAG00000045683) #28	ENSMFAG00000054126	ENSMFAG00000031922 #29	ENSMFAG00000035379	AFTPH (ENSMFAG00000041331) #30	ENSMFAG00000002213	ENSMFAG00000061518	SERTAD2 (ENSMFAG00000037664)
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000155413.l.a.b	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00940000156841 #35	ENSGT00910000147398
Olive baboon	MODERN SPECIES	5	PUS10 (ENSPANG00000018036) #10	PEX13 (ENSPANG00000022181) #11	ENSPANG00000017323 #12	ENSPANG00000039323	C2orf74 (ENSPANG00000035894)	ENSPANG00000016913 #13	USP34 (ENSPANG00000025375) #14	XPO1 (ENSPANG00000006892) #15	FAM161A (ENSPANG00000010259) #16	CCT4 (ENSPANG00000019105) #17	COMMD1 (ENSPANG00000006093) #18	B3GNT2 (ENSPANG00000007808) #19	ENSPANG00000051251	TMEM17 (ENSPANG00000042367) #20	EHBP1 (ENSPANG00000016912) #21	OTX1 (ENSPANG00000038245) #22	WDPCP (ENSPANG00000019775) #23	ENSPANG00000044221	ENSPANG00000006332	MDH1 (ENSPANG00000014437) #25	UGP2 (ENSPANG00000020689) #26	VPS54 (ENSPANG00000022299) #27	PELI1 (ENSPANG00000008630) #28	LGALSL (ENSPANG00000007113) #29	AFTPH (ENSPANG00000019355) #30	ENSPANG00000033862	SERTAD2 (ENSPANG00000021214)	SLC1A4 (ENSPANG00000025917) #31	CEP68 (ENSPANG00000009710) #32	RAB1A (ENSPANG00000010485) #33	ACTR2 (ENSPANG00000007073) #34
Cercopithecinae_d	ANCESTRAL SPECIES	32	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000155413.l.a.b	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00390000001858	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154556.tb.a #34	ENSGT00940000156841 #35	ENSGT00910000147398
Sooty mangabey	MODERN SPECIES	494	SANBR (ENSCATG00000045345) #12	ENSCATG00000045334	C2orf74 (ENSCATG00000037754)	ENSCATG00000043938 #13	ENSCATG00000038823 #13	USP34 (ENSCATG00000042180) #14	ENSCATG00000013431	XPO1 (ENSCATG00000032674) #15	FAM161A (ENSCATG00000043996) #16	CCT4 (ENSCATG00000038933) #17	ENSCATG00000038149	COMMD1 (ENSCATG00000011551) #18	B3GNT2 (ENSCATG00000011785) #19	TMEM17 (ENSCATG00000038173) #20	EHBP1 (ENSCATG00000030805) #21	OTX1 (ENSCATG00000031998) #22	WDPCP (ENSCATG00000043458) #23	MDH1 (ENSCATG00000030537) #25	ENSCATG00000010001	UGP2 (ENSCATG00000038117) #26	VPS54 (ENSCATG00000000035) #27	PELI1 (ENSCATG00000031456) #28	LGALSL (ENSCATG00000029852) #29	AFTPH (ENSCATG00000032038) #30	ENSCATG00000045350	SERTAD2 (ENSCATG00000012102)	SLC1A4 (ENSCATG00000036187) #31	CEP68 (ENSCATG00000032378) #32	RAB1A (ENSCATG00000030853) #33	ACTR2 (ENSCATG00000036025) #34	SPRED2 (ENSCATG00000034117) #35
Drill	MODERN SPECIES	951	PEX13 (ENSMLEG00000042218) #11	SANBR (ENSMLEG00000044342) #12	C2orf74 (ENSMLEG00000041467)	ENSMLEG00000028334 #13	ENSMLEG00000036543 #13	ENSMLEG00000029346	USP34 (ENSMLEG00000040976) #14	XPO1 (ENSMLEG00000032004) #15	FAM161A (ENSMLEG00000038057) #16	CCT4 (ENSMLEG00000037693) #17	ENSMLEG00000044216	COMMD1 (ENSMLEG00000042809) #18	B3GNT2 (ENSMLEG00000008417) #19	TMEM17 (ENSMLEG00000040238) #20	EHBP1 (ENSMLEG00000031553) #21	OTX1 (ENSMLEG00000029765) #22	WDPCP (ENSMLEG00000040899) #23	MDH1 (ENSMLEG00000029382) #25	UGP2 (ENSMLEG00000038204) #26	VPS54 (ENSMLEG00000034933) #27	PELI1 (ENSMLEG00000028248) #28
Vervet Monkey	MODERN SPECIES	5	ENSCSAG00000014430	PUS10 (ENSCSAG00000014451) #10	PEX13 (ENSCSAG00000014465) #11	SANBR (ENSCSAG00000014480) #12	C2orf74 (ENSCSAG00000014493)	ENSCSAG00000014516 #13	USP34 (ENSCSAG00000014580) #14	XPO1 (ENSCSAG00000014606) #15	FAM161A (ENSCSAG00000014628) #16	CCT4 (ENSCSAG00000014640) #17	COMMD1 (ENSCSAG00000014646) #18	B3GNT2 (ENSCSAG00000019448) #19	ENSCSAG00000019447	TMEM17 (ENSCSAG00000014653) #20	EHBP1 (ENSCSAG00000014669) #21	OTX1 (ENSCSAG00000014675) #22	ENSCSAG00000019446	WDPCP (ENSCSAG00000014684) #23	MDH1 (ENSCSAG00000014691) #25	UGP2 (ENSCSAG00000014697) #26	VPS54 (ENSCSAG00000014705) #27	PELI1 (ENSCSAG00000014710) #28	LGALSL (ENSCSAG00000014717) #29	AFTPH (ENSCSAG00000014726) #30	SERTAD2 (ENSCSAG00000019445)	ENSCSAG00000019444	SLC1A4 (ENSCSAG00000014735) #31	CEP68 (ENSCSAG00000014763) #32	ENSCSAG00000014775	ACTR2 (ENSCSAG00000014779) #34	SPRED2 (ENSCSAG00000014788) #35
Rhinopithecus	ANCESTRAL SPECIES	672												ENSGT00390000012029.e #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22
Black snub-nosed monkey	MODERN SPECIES	1057															EHBP1 (ENSRBIG00000044571) #21	OTX1 (ENSRBIG00000037178) #22
Golden snub-nosed monkey	MODERN SPECIES	1447												ENSRROG00000041531 #18	B3GNT2 (ENSRROG00000024571) #19	TMEM17 (ENSRROG00000038870) #20	EHBP1 (ENSRROG00000030374) #21	OTX1 (ENSRROG00000038350) #22
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529.o #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029.h #18	ENSGT00940000155345.m #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h.a.b #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a.a.a #28	ENSGT00950000183050.b.b.a.a.b #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154277.a.b.a.b	ENSGT00940000154556 #34
Cebidae	ANCESTRAL SPECIES	15	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529.o #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029.h #18	ENSGT00940000155345.m #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h.a.b #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a.a.b #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154277.a.b.a.b	ENSGT00940000154556 #34	ENSGT00910000147214
Cebidae_a	ANCESTRAL SPECIES	30	ENSGT00940000158732 #9	ENSGT00390000007529.o #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00900000141074.e.b.a	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029.h #18	ENSGT00940000155345.m #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.h.a.b.b #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a.a.b #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958.lb.a #33	ENSGT00940000154277.a.b.a.b	ENSGT00940000154556 #34	ENSGT00910000147214	ENSGT00940000156841 #35
Capuchin	MODERN SPECIES	23								ENSCCAG00000023277	FAM161A (ENSCCAG00000032868) #16	CCT4 (ENSCCAG00000036910) #17	ENSCCAG00000014874	COMMD1 (ENSCCAG00000021063) #18	B3GNT2 (ENSCCAG00000004376) #19	TMEM17 (ENSCCAG00000033287) #20	EHBP1 (ENSCCAG00000022934) #21	OTX1 (ENSCCAG00000037783) #22	WDPCP (ENSCCAG00000026603) #23	ENSCCAG00000032985 #25	UGP2 (ENSCCAG00000038081) #26	VPS54 (ENSCCAG00000037148) #27	ENSCCAG00000033895 #28	LGALSL (ENSCCAG00000035879) #29	ENSCCAG00000030319	AFTPH (ENSCCAG00000022631) #30	ENSCCAG00000032655	SLC1A4 (ENSCCAG00000022825) #31	ENSCCAG00000037790	CEP68 (ENSCCAG00000022595) #32	RAB1A (ENSCCAG00000021869) #33	ENSCCAG00000038117	ENSCCAG00000021773
Bolivian squirrel monkey	MODERN SPECIES	48	PUS10 (ENSSBOG00000014791) #10	PEX13 (ENSSBOG00000026445) #11	SANBR (ENSSBOG00000025340) #12	C2orf74 (ENSSBOG00000026818)	ENSSBOG00000029475 #13	USP34 (ENSSBOG00000034202) #14	ENSSBOG00000020979	XPO1 (ENSSBOG00000034467) #15	ENSSBOG00000010136	FAM161A (ENSSBOG00000034089) #16	CCT4 (ENSSBOG00000026025) #17	COMMD1 (ENSSBOG00000032499) #18	ENSSBOG00000019927 #19	TMEM17 (ENSSBOG00000026954) #20	EHBP1 (ENSSBOG00000027993) #21	OTX1 (ENSSBOG00000030274) #22	WDPCP (ENSSBOG00000020988) #23	ENSSBOG00000035941 #25	UGP2 (ENSSBOG00000035973) #26	VPS54 (ENSSBOG00000034598) #27	PELI1 (ENSSBOG00000001340) #28	LGALSL (ENSSBOG00000029775) #29	ENSSBOG00000019039	AFTPH (ENSSBOG00000027803) #30	SLC1A4 (ENSSBOG00000023405) #31	CEP68 (ENSSBOG00000033296) #32	RAB1A (ENSSBOG00000023732) #33	ENSSBOG00000031295	ENSSBOG00000018757	ENSSBOG00000024339	ACTR2 (ENSSBOG00000028028) #34
Marmoset	MODERN SPECIES	5	REL (ENSCJAG00000008975) #9	PUS10 (ENSCJAG00000009054) #10	PEX13 (ENSCJAG00000009037) #11	SANBR (ENSCJAG00000009029) #12	C2orf74 (ENSCJAG00000042078)	USP34 (ENSCJAG00000044195) #14	XPO1 (ENSCJAG00000008877) #15	FAM161A (ENSCJAG00000008852) #16	CCT4 (ENSCJAG00000008703) #17	ENSCJAG00000060745 #18	COMMD1 (ENSCJAG00000008693) #18	B3GNT2 (ENSCJAG00000046682) #19	TMEM17 (ENSCJAG00000045778) #20	ENSCJAG00000077815	EHBP1 (ENSCJAG00000008586) #21	OTX1 (ENSCJAG00000083222) #22	ENSCJAG00000075756	WDPCP (ENSCJAG00000007061) #23	ENSCJAG00000007018 #25	UGP2 (ENSCJAG00000006960) #26	VPS54 (ENSCJAG00000006914) #27	PELI1 (ENSCJAG00000006889) #28	ENSCJAG00000070703	ENSCJAG00000006878 #29	ENSCJAG00000046867	AFTPH (ENSCJAG00000006819) #30	SERTAD2 (ENSCJAG00000006818)	ENSCJAG00000074553	ENSCJAG00000074052	SLC1A4 (ENSCJAG00000006795) #31	CEP68 (ENSCJAG00000006788) #32
Mas night monkey	MODERN SPECIES	655	ENSANAG00000023187 #13	USP34 (ENSANAG00000028238) #14	ENSANAG00000019334	XPO1 (ENSANAG00000020802) #15	ENSANAG00000026753	FAM161A (ENSANAG00000033665) #16	CCT4 (ENSANAG00000036567) #17	COMMD1 (ENSANAG00000030463) #18	ENSANAG00000018780	ENSANAG00000036675	ENSANAG00000036898	ENSANAG00000019382 #19	ENSANAG00000024280	TMEM17 (ENSANAG00000023395) #20	EHBP1 (ENSANAG00000022884) #21	OTX1 (ENSANAG00000032160) #22	WDPCP (ENSANAG00000033928) #23	ENSANAG00000029892	ENSANAG00000038114 #25	ENSANAG00000019559	UGP2 (ENSANAG00000035096) #26	VPS54 (ENSANAG00000021718) #27	ENSANAG00000029544 #28	ENSANAG00000026716	LGALSL (ENSANAG00000035714) #29	AFTPH (ENSANAG00000033138) #30	ENSANAG00000025925	SLC1A4 (ENSANAG00000034703) #31	CEP68 (ENSANAG00000035796) #32	RAB1A (ENSANAG00000020929) #33	ENSANAG00000038454
Tarsier	MODERN SPECIES	6894													TMEM17 (ENSTSYG00000036342) #20	EHBP1 (ENSTSYG00000003022) #21	ENSTSYG00000032250	OTX1 (ENSTSYG00000036000) #22
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.g.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.g.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00390000001858	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35
Mouse lemur	MODERN SPECIES	26	PUS10 (ENSMICG00000010073) #10	PEX13 (ENSMICG00000042434) #11	SANBR (ENSMICG00000016768) #12	ENSMICG00000034983	ENSMICG00000044675 #13	ENSMICG00000007130 #13	USP34 (ENSMICG00000007137) #14	XPO1 (ENSMICG00000027770) #15	FAM161A (ENSMICG00000032665) #16	ENSMICG00000015263 #17	COMMD1 (ENSMICG00000036432) #18	TMEM17 (ENSMICG00000045940) #20	ENSMICG00000035187	EHBP1 (ENSMICG00000011224) #21	ENSMICG00000036558	OTX1 (ENSMICG00000032707) #22	WDPCP (ENSMICG00000017077) #23	ENSMICG00000015195 #25	UGP2 (ENSMICG00000006509) #26	VPS54 (ENSMICG00000035608) #27	PELI1 (ENSMICG00000044746) #28	LGALSL (ENSMICG00000031755) #29	AFTPH (ENSMICG00000037342) #30	ENSMICG00000044806	ENSMICG00000041471	SLC1A4 (ENSMICG00000012577) #31	CEP68 (ENSMICG00000037255) #32	RAB1A (ENSMICG00000012587) #33	ENSMICG00000036415 #34	SPRED2 (ENSMICG00000006435) #35	MEIS1 (ENSMICG00000017054)
Lemuriformes_a	ANCESTRAL SPECIES	52	ENSGT00940000156467 #8	ENSGT00940000158732 #9	ENSGT00390000007529 #10	ENSGT00390000016883 #11	ENSGT00390000008178 #12	ENSGT00390000004911	ENSGT00940000157344 #13	ENSGT00940000158659 #14	ENSGT00940000153408.B #15	ENSGT00940000157824 #16	ENSGT00550000074956 #17	ENSGT00390000012029 #18	ENSGT00940000155345 #19	ENSGT00940000153899.b.b #20	ENSGT00940000157597 #21	ENSGT00940000161234 #22	ENSGT00390000016551 #23	ENSGT00530000063410.a.g.a #25	ENSGT00940000153464.B #26	ENSGT00390000000583 #27	ENSGT00950000183050.b.b.a #28	ENSGT00940000155337 #29	ENSGT00940000154186.a #30	ENSGT00530000063867.b	ENSGT00940000157081 #31	ENSGT00810000125473.A #32	ENSGT00940000154958 #33	ENSGT00940000154556 #34	ENSGT00910000147398	ENSGT00940000156841 #35	ENSGT00940000156327
Coquerels sifaka	MODERN SPECIES	157	REL (ENSPCOG00000023844) #9	PUS10 (ENSPCOG00000027006) #10	PEX13 (ENSPCOG00000023862) #11	SANBR (ENSPCOG00000016045) #12	C2orf74 (ENSPCOG00000019501)	ENSPCOG00000019004 #13	ENSPCOG00000014897 #13	USP34 (ENSPCOG00000019384) #14	ENSPCOG00000026732	XPO1 (ENSPCOG00000023123) #15	FAM161A (ENSPCOG00000025568) #16	CCT4 (ENSPCOG00000024760) #17	COMMD1 (ENSPCOG00000002593) #18	TMEM17 (ENSPCOG00000003689) #20	EHBP1 (ENSPCOG00000013807) #21	OTX1 (ENSPCOG00000007128) #22	WDPCP (ENSPCOG00000021207) #23	ENSPCOG00000022476 #25	UGP2 (ENSPCOG00000021592) #26	VPS54 (ENSPCOG00000021532) #27	PELI1 (ENSPCOG00000016939) #28	LGALSL (ENSPCOG00000024215) #29	AFTPH (ENSPCOG00000015597) #30	ENSPCOG00000014082	SLC1A4 (ENSPCOG00000008394) #31	CEP68 (ENSPCOG00000017947) #32	RAB1A (ENSPCOG00000017244) #33	ACTR2 (ENSPCOG00000025808) #34	SPRED2 (ENSPCOG00000021475) #35	ENSPCOG00000003824	ENSPCOG00000017120
Greater bamboo lemur	MODERN SPECIES	748															EHBP1 (ENSPSMG00000004151) #21	OTX1 (ENSPSMG00000004137) #22	WDPCP (ENSPSMG00000004066) #23	ENSPSMG00000003961 #25	UGP2 (ENSPSMG00000003903) #26	VPS54 (ENSPSMG00000003489) #27	PELI1 (ENSPSMG00000003310) #28	DENND5B (ENSPSMG00000003278)	ETFBKMT (ENSPSMG00000003252)	ENSPSMG00000003245	ENSPSMG00000003238	ENSPSMG00000003229	RESF1 (ENSPSMG00000003227)	BICD1 (ENSPSMG00000003186)
Bushbaby	MODERN SPECIES	139	PAPOLG (ENSOGAG00000003145) #8	REL (ENSOGAG00000013722) #9	PUS10 (ENSOGAG00000013726) #10	PEX13 (ENSOGAG00000032082) #11	SANBR (ENSOGAG00000013736) #12	C2orf74 (ENSOGAG00000033349)	ENSOGAG00000012906 #13	USP34 (ENSOGAG00000012908) #14	XPO1 (ENSOGAG00000000143) #15	FAM161A (ENSOGAG00000024144) #16	CCT4 (ENSOGAG00000003974) #17	COMMD1 (ENSOGAG00000029292) #18	ENSOGAG00000028774 #19	TMEM17 (ENSOGAG00000015014) #20	EHBP1 (ENSOGAG00000005236) #21	OTX1 (ENSOGAG00000027686) #22	WDPCP (ENSOGAG00000026615) #23	ENSOGAG00000014487 #25	UGP2 (ENSOGAG00000013975) #26	VPS54 (ENSOGAG00000013980) #27	PELI1 (ENSOGAG00000013984) #28	LGALSL (ENSOGAG00000007901) #29	ENSOGAG00000011268 #30	SERTAD2 (ENSOGAG00000011272)	SLC1A4 (ENSOGAG00000005682) #31	CEP68 (ENSOGAG00000005687) #32	RAB1A (ENSOGAG00000026181) #33	ENSOGAG00000005688 #34