Glires	ANCESTRAL SPECIES	6	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793 #20	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00980000202834	ENSGT00940000160587 #35
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793 #20	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00980000202834	ENSGT00940000160587 #35
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00980000202834	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793.j.a ##20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00940000153691.a.b ##37	ENSGT00950000183082.a
Naked mole-rat female	MODERN SPECIES	26	CENPN (ENSHGLG00000050859) #7	ATMIN (ENSHGLG00000014861) #8	C16orf46 (ENSHGLG00000034703) #9	GCSH (ENSHGLG00000044660) #10	ENSHGLG00000038072 #11	BCO1 (ENSHGLG00000017639) #12	GAN (ENSHGLG00000018670) #13	CMIP (ENSHGLG00000009888) #14	PLCG2 (ENSHGLG00000014242) #15	SDR42E1 (ENSHGLG00000010816) #16	ENSHGLG00000038316 #17	MPHOSPH6 (ENSHGLG00000019140) #18	ENSHGLG00000045793 #19	ENSHGLG00000018583 #20	CIAO2B (ENSHGLG00000043672) #21	RRAD (ENSHGLG00000016885) #22	CDH16 (ENSHGLG00000019376) #23	PDP2 (ENSHGLG00000039814) #24	CA7 (ENSHGLG00000016917) #25	NAE1 (ENSHGLG00000018813) #26	TERB1 (ENSHGLG00000019160) #27	ENSHGLG00000017579 #28	CMTM4 (ENSHGLG00000010963) #29	CMTM3 (ENSHGLG00000011197) #30	ENSHGLG00000012002 #31	TK2 (ENSHGLG00000032022) #32	ENSHGLG00000045630 #33	BEAN1 (ENSHGLG00000045590) #34	ENSHGLG00000013876 #35	ENSHGLG00000017123 #36	ENSHGLG00000017133 #37
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793.j.a ##20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00940000153691.a.b ##37	ENSGT00950000183082.a
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793.j.a ##20	ENSGT00940000164375	ENSGT00940000153793.i.b.c ##20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00940000153691.a.b ##37	ENSGT00950000183082.a
Long-tailed chinchilla	MODERN SPECIES	140													ENSCLAG00000006303 #21	ENSCLAG00000005701 #21	ENSCLAG00000005375 #21	RRAD (ENSCLAG00000005281) #22	CDH16 (ENSCLAG00000009522) #23	PDP2 (ENSCLAG00000010280) #24	CA7 (ENSCLAG00000009866) #25	NAE1 (ENSCLAG00000008427) #26	TERB1 (ENSCLAG00000007580) #27	DYNC1LI2 (ENSCLAG00000006461) #28	CMTM4 (ENSCLAG00000006181) #29	CMTM3 (ENSCLAG00000005520) #30	ENSCLAG00000005405	CKLF (ENSCLAG00000008088) #31	TK2 (ENSCLAG00000008240) #32	BEAN1 (ENSCLAG00000008190) #34	CDH5 (ENSCLAG00000012589) #35	CDH11 (ENSCLAG00000016732) #37	CDH8 (ENSCLAG00000007676) ##37
Degu	MODERN SPECIES	52	FBXL8 (ENSODEG00000016675)	TRADD (ENSODEG00000016273)	B3GNT9 (ENSODEG00000015783)	PHAF1 (ENSODEG00000015277)	CBFB (ENSODEG00000016515)	CES4A (ENSODEG00000015763)	CES3 (ENSODEG00000016302)	ENSODEG00000015656 ##20	ENSODEG00000016121	ENSODEG00000017576 ##20	ENSODEG00000015554 ##20	ENSODEG00000016915 #20	ENSODEG00000016345	ENSODEG00000016240 #20	ENSODEG00000015617 #21	RRAD (ENSODEG00000015827) #22	CDH16 (ENSODEG00000016010) #23	PDP2 (ENSODEG00000020328) #24	CA7 (ENSODEG00000015891) #25	ENSODEG00000016176 #26	TERB1 (ENSODEG00000017438) #27	ENSODEG00000016281 #28	CMTM4 (ENSODEG00000015905) #29	CMTM3 (ENSODEG00000016359) #30	CKLF (ENSODEG00000016474) #31	TK2 (ENSODEG00000016329) #32	BEAN1 (ENSODEG00000016084) #34	CDH5 (ENSODEG00000015848) #35	CDH11 (ENSODEG00000016523) #37	ENSODEG00000016848	ENSODEG00000016592
Guinea pig	MODERN SPECIES	22	ENSCPOG00000004946	HSF4 (ENSCPOG00000010834)	FBXL8 (ENSCPOG00000010832)	TRADD (ENSCPOG00000010831)	B3GNT9 (ENSCPOG00000026402)	PHAF1 (ENSCPOG00000010828)	ENSCPOG00000010825	CES4A (ENSCPOG00000005603)	CES3 (ENSCPOG00000033893)	ENSCPOG00000039038 ##20	ENSCPOG00000034227	ENSCPOG00000005610 ##20	ENSCPOG00000034407 ##20	ENSCPOG00000034731 #20	CIAO2B (ENSCPOG00000007431) #21	RRAD (ENSCPOG00000025211) #22	CDH16 (ENSCPOG00000021245) #23	PDP2 (ENSCPOG00000009661) #24	ENSCPOG00000033546	CA7 (ENSCPOG00000024957) #25	NAE1 (ENSCPOG00000020116) #26	TERB1 (ENSCPOG00000015414) #27	DYNC1LI2 (ENSCPOG00000015409) #28	CMTM4 (ENSCPOG00000015406) #29	ENSCPOG00000015404 #30	CKLF (ENSCPOG00000040504) #31	TK2 (ENSCPOG00000006736) #32	BEAN1 (ENSCPOG00000036515) #34	CDH5 (ENSCPOG00000037748) #35	ENSCPOG00000040767 #37	ENSCPOG00000036927 #37
Sciuridae	ANCESTRAL SPECIES	5	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.k #20	ENSGT00940000153793.l #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00980000202834	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375.a	ENSGT00940000153793.k.a.a.a.b #20	ENSGT00940000153793.k.a.a.b.a #20	ENSGT00940000153793.l #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00940000153691.a.b ##37
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375.a	ENSGT00940000153793.k.a.a.a.b #20	ENSGT00940000153793.k.a.a.b.a #20	ENSGT00940000153793.k.a.a.a.a.a.a #20	ENSGT00940000153793.k.a.a.a.a.a.b #20	ENSGT00940000164375.b	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00940000153691.a.b ##37
Arctic ground squirrel	MODERN SPECIES	105															CIAO2B (ENSUPAG00010021302) #21	RRAD (ENSUPAG00010021305) #22	CDH16 (ENSUPAG00010021315) #23	PDP2 (ENSUPAG00010021334) #24	CA7 (ENSUPAG00010021336) #25	NAE1 (ENSUPAG00010021346) #26	TERB1 (ENSUPAG00010021363) #27	DYNC1LI2 (ENSUPAG00010021388) #28	CMTM4 (ENSUPAG00010021404) #29	CMTM3 (ENSUPAG00010021411) #30	ENSUPAG00010021429	CKLF (ENSUPAG00010021432) #31	TK2 (ENSUPAG00010021435) #32	ENSUPAG00010021443	BEAN1 (ENSUPAG00010021449) #34	CDH5 (ENSUPAG00010021462) #35	CDH11 (ENSUPAG00010021471) #37
Squirrel	MODERN SPECIES	75	TRADD (ENSSTOG00000011360)	B3GNT9 (ENSSTOG00000028759)	PHAF1 (ENSSTOG00000011346)	CBFB (ENSSTOG00000011344)	CES4A (ENSSTOG00000011337)	CES3 (ENSSTOG00000012032)	ENSSTOG00000025164	ENSSTOG00000026289 #20	ENSSTOG00000027386 #20	ENSSTOG00000022937 #20	ENSSTOG00000025757 #20	ENSSTOG00000024931 #20	ENSSTOG00000019872 #20	ENSSTOG00000028587	CIAO2B (ENSSTOG00000007870) #21	RRAD (ENSSTOG00000007859) #22	ENSSTOG00000007823 #23	ENSSTOG00000031778	ENSSTOG00000029943 #23	PDP2 (ENSSTOG00000007817) #24	CA7 (ENSSTOG00000021436) #25	NAE1 (ENSSTOG00000029230) #26	TERB1 (ENSSTOG00000007763) #27	DYNC1LI2 (ENSSTOG00000007750) #28	CMTM4 (ENSSTOG00000007736) #29	CMTM3 (ENSSTOG00000026680) #30	CKLF (ENSSTOG00000007682) #31	TK2 (ENSSTOG00000029024) #32	BEAN1 (ENSSTOG00000027189) #34	CDH5 (ENSSTOG00000006256) #35	CDH11 (ENSSTOG00000011815) #37
Eurasian red squirrel	MODERN SPECIES	8	MATCAP1 (ENSSVLG00005024362)	ENSSVLG00005024414	HSF4 (ENSSVLG00005024450)	FBXL8 (ENSSVLG00005024480)	TRADD (ENSSVLG00005024499)	B3GNT9 (ENSSVLG00005024534)	PHAF1 (ENSSVLG00005024553)	CBFB (ENSSVLG00005024570)	ENSSVLG00005024618	CES4A (ENSSVLG00005024667)	CES3 (ENSSVLG00005024805)	ENSSVLG00005025098	ENSSVLG00005025347 #20	ENSSVLG00005025467 #20	CIAO2B (ENSSVLG00005025484) #21	RRAD (ENSSVLG00005025495) #22	CDH16 (ENSSVLG00005025529) #23	PDP2 (ENSSVLG00005025571) #24	CA7 (ENSSVLG00005025581) #25	NAE1 (ENSSVLG00005025610) #26	TERB1 (ENSSVLG00005025637) #27	DYNC1LI2 (ENSSVLG00005025665) #28	CMTM4 (ENSSVLG00005025679) #29	CMTM3 (ENSSVLG00005025691) #30	ENSSVLG00005025706	CKLF (ENSSVLG00005025721) #31	TK2 (ENSSVLG00005025748) #32	BEAN1 (ENSSVLG00005016934) #34	ENSSVLG00005016998	CDH5 (ENSSVLG00005017067) #35	CDH11 (ENSSVLG00005017448) #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Myomorpha	ANCESTRAL SPECIES	22	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT01030000234613.a.b	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000153793.h #20	ENSGT00940000164375	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00960000190850
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a	ENSGT00940000163203	ENSGT00390000005715.b	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35
Mus	ANCESTRAL SPECIES	6	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00940000163203.b	ENSGT00390000005715.b	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35
spretus	MODERN SPECIES	17	Hsf4 (MGP_SPRETEiJ_G0032587)	Fbxl8 (MGP_SPRETEiJ_G0032586)	Tradd (MGP_SPRETEiJ_G0032585)	B3gnt9 (MGP_SPRETEiJ_G0032584)	Phaf1 (MGP_SPRETEiJ_G0032583)	Cbfb (MGP_SPRETEiJ_G0032582)	Ces4a (MGP_SPRETEiJ_G0032581)	MGP_SPRETEiJ_G0032580	MGP_SPRETEiJ_G0032579	Ces2h (MGP_SPRETEiJ_G0032578)	Ces2g (MGP_SPRETEiJ_G0032577) #20	Ces2f (MGP_SPRETEiJ_G0032576) #20	Ces2e (MGP_SPRETEiJ_G0032575) #20	MGP_SPRETEiJ_G0032574 #20	Ciao2b (MGP_SPRETEiJ_G0032571) #21	Rrad (MGP_SPRETEiJ_G0032570) #22	Cdh16 (MGP_SPRETEiJ_G0032569) #23	Pdp2 (MGP_SPRETEiJ_G0032568) #24	Car7 (MGP_SPRETEiJ_G0032567) #25	Nae1 (MGP_SPRETEiJ_G0032566) #26	Terb1 (MGP_SPRETEiJ_G0032565) #27	Dync1li2 (MGP_SPRETEiJ_G0032564) #28	Cmtm4 (MGP_SPRETEiJ_G0032563) #29	Cmtm3 (MGP_SPRETEiJ_G0032562) #30	Cmtm2b (MGP_SPRETEiJ_G0032561)	MGP_SPRETEiJ_G0032560	MGP_SPRETEiJ_G0032559	Cklf (MGP_SPRETEiJ_G0032558) #31	Tk2 (MGP_SPRETEiJ_G0032557) #32	Bean1 (MGP_SPRETEiJ_G0032556) #34	Cdh5 (MGP_SPRETEiJ_G0032555) #35
Steppe mouse	MODERN SPECIES	2604														ENSMSIG00000023192 #20	Ciao2b (ENSMSIG00000023211) #21	Rrad (ENSMSIG00000023236) #22	Cdh16 (ENSMSIG00000023256) #23	Pdp2 (ENSMSIG00000023367) #24	ENSMSIG00000023374	Car7 (ENSMSIG00000023381) #25	Nae1 (ENSMSIG00000023417) #26	Terb1 (ENSMSIG00000023542) #27	Dync1li2 (ENSMSIG00000023574) #28	Cmtm4 (ENSMSIG00000023615) #29	Cmtm3 (ENSMSIG00000023616) #30	ENSMSIG00000023656 #31	ENSMSIG00000023670	ENSMSIG00000023711 #31	Tk2 (ENSMSIG00000023721) #32	ENSMSIG00000023751 #34	Cdh5 (ENSMSIG00000023895) #35
Mouse	MODERN SPECIES	17	Tradd (ENSMUSG00000031887)	B3gnt9 (ENSMUSG00000069920)	Phaf1 (ENSMUSG00000031889)	Cbfb (ENSMUSG00000031885)	Ces4a (ENSMUSG00000060560)	Ces3b (ENSMUSG00000062181)	Ces3a (ENSMUSG00000069922)	Ces2h (ENSMUSG00000091813)	Ces2g (ENSMUSG00000031877) #20	Ces2f (ENSMUSG00000062826) #20	Ces2e (ENSMUSG00000031886) #20	Ces2c (ENSMUSG00000061825) #20	Ces2b (ENSMUSG00000050097) #20	Ces2a (ENSMUSG00000055730) #20	Ciao2b (ENSMUSG00000031879) #21	Rrad (ENSMUSG00000031880) #22	Cdh16 (ENSMUSG00000031881) #23	Pdp2 (ENSMUSG00000048371) #24	Car7 (ENSMUSG00000031883) #25	Nae1 (ENSMUSG00000031878) #26	Terb1 (ENSMUSG00000052616) #27	Dync1li2 (ENSMUSG00000035770) #28	Cmtm4 (ENSMUSG00000096188) #29	Cmtm3 (ENSMUSG00000031875) #30	Cmtm2b (ENSMUSG00000035785)	Cmtm1 (ENSMUSG00000110430)	Cmtm2a (ENSMUSG00000074127)	Cklf (ENSMUSG00000054400) #31	Tk2 (ENSMUSG00000035824) #32	Bean1 (ENSMUSG00000031872) #34	Cdh5 (ENSMUSG00000031871) #35
Ryukyu mouse	MODERN SPECIES	17	Hsf4 (MGP_CAROLIEiJ_G0031469)	Fbxl8 (MGP_CAROLIEiJ_G0031468)	Tradd (MGP_CAROLIEiJ_G0031467)	B3gnt9 (MGP_CAROLIEiJ_G0031466)	Phaf1 (MGP_CAROLIEiJ_G0031465)	Cbfb (MGP_CAROLIEiJ_G0031464)	Ces4a (MGP_CAROLIEiJ_G0031463)	MGP_CAROLIEiJ_G0031462	Ces2h (MGP_CAROLIEiJ_G0031461)	MGP_CAROLIEiJ_G0031460 #20	Ces2g (MGP_CAROLIEiJ_G0031459) #20	Ces2f (MGP_CAROLIEiJ_G0031458) #20	Ces2e (MGP_CAROLIEiJ_G0031457) #20	Ces2c (MGP_CAROLIEiJ_G0031456) #20	Ciao2b (MGP_CAROLIEiJ_G0031454) #21	Rrad (MGP_CAROLIEiJ_G0031453) #22	Cdh16 (MGP_CAROLIEiJ_G0031452) #23	Pdp2 (MGP_CAROLIEiJ_G0031451) #24	Car7 (MGP_CAROLIEiJ_G0031450) #25	Nae1 (MGP_CAROLIEiJ_G0031449) #26	Terb1 (MGP_CAROLIEiJ_G0031448) #27	Dync1li2 (MGP_CAROLIEiJ_G0031447) #28	Cmtm4 (MGP_CAROLIEiJ_G0031446) #29	Cmtm3 (MGP_CAROLIEiJ_G0031445) #30	Cmtm2b (MGP_CAROLIEiJ_G0031444)	MGP_CAROLIEiJ_G0031443	MGP_CAROLIEiJ_G0031442	Cklf (MGP_CAROLIEiJ_G0031441) #31	Tk2 (MGP_CAROLIEiJ_G0031440) #32	MGP_CAROLIEiJ_G0031439 #34	Cdh5 (MGP_CAROLIEiJ_G0031438) #35
Shrew mouse	MODERN SPECIES	12	Tradd (MGP_PahariEiJ_G0023067)	B3gnt9 (MGP_PahariEiJ_G0023066)	Phaf1 (MGP_PahariEiJ_G0023065)	Cbfb (MGP_PahariEiJ_G0023064)	Ces4a (MGP_PahariEiJ_G0023063)	MGP_PahariEiJ_G0023062	MGP_PahariEiJ_G0023061	Ces2h (MGP_PahariEiJ_G0023060)	Ces2g (MGP_PahariEiJ_G0023059) #20	Ces2f (MGP_PahariEiJ_G0023058) #20	Ces2e (MGP_PahariEiJ_G0023057) #20	MGP_PahariEiJ_G0023056 #20	MGP_PahariEiJ_G0023054 #20	MGP_PahariEiJ_G0023055 #20	Ciao2b (MGP_PahariEiJ_G0023052) #21	Rrad (MGP_PahariEiJ_G0023051) #22	Cdh16 (MGP_PahariEiJ_G0023050) #23	Pdp2 (MGP_PahariEiJ_G0023049) #24	Car7 (MGP_PahariEiJ_G0023048) #25	MGP_PahariEiJ_G0023047 #26	Terb1 (MGP_PahariEiJ_G0023046) #27	Dync1li2 (MGP_PahariEiJ_G0023045) #28	Cmtm4 (MGP_PahariEiJ_G0023044) #29	Cmtm3 (MGP_PahariEiJ_G0023043) #30	Cmtm2b (MGP_PahariEiJ_G0023042)	MGP_PahariEiJ_G0023041	MGP_PahariEiJ_G0023040	Cmtm2a (MGP_PahariEiJ_G0023039)	MGP_PahariEiJ_G0023038 #31	Tk2 (MGP_PahariEiJ_G0023037) #32	Bean1 (MGP_PahariEiJ_G0023036) #34
Rat	MODERN SPECIES	10						LOC100910259 (ENSRNOG00000069933) #20	LOC679368 (ENSRNOG00000048823) #20	Ces2g (ENSRNOG00000013808) #20	LOC679149 (ENSRNOG00000048039) #20	Ces2c-ps2 (ENSRNOG00000052151) #20	Ces2a (ENSRNOG00000011330) #20	Ces2e (ENSRNOG00000011635) #20	AABR07043429.1 (ENSRNOG00000049890)	Ces2j (ENSRNOG00000029744) #20	Ciao2b (ENSRNOG00000011865) #21	Rrad (ENSRNOG00000011901) #22	Cdh16 (ENSRNOG00000012222) #23	Pdp2 (ENSRNOG00000012343) #24	Car7 (ENSRNOG00000012371) #25	Nae1 (ENSRNOG00000033133) #26	Terb1 (ENSRNOG00000055097) #27	Dync1li2 (ENSRNOG00000025791) #28	Cmtm4 (ENSRNOG00000011009) #29	Cmtm3 (ENSRNOG00000010691) #30	LOC102554842 (ENSRNOG00000057998)	Cmtm1 (ENSRNOG00000057711)	ENSRNOG00000071201	Cmtm2a (ENSRNOG00000025420)	Cklf (ENSRNOG00000012752) #31	Tk2 (ENSRNOG00000012853) #32	Bean1 (ENSRNOG00000066314) #34
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.b.a.a #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00960000190850
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.b.a.a.a #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37
Chinese hamster chok1gshd	MODERN SPECIES	112	ENSCGRG00001009474	ENSCGRG00001019809 #20	Ces2h (ENSCGRG00001009506)	ENSCGRG00001011776 #20	Ces2f (ENSCGRG00001020935) #20	Ces2e (ENSCGRG00001025032) #20	ENSCGRG00001024666 #20	ENSCGRG00001009450 #20	ENSCGRG00001009635 #20	ENSCGRG00001012927 #20	ENSCGRG00001023717 #20	ENSCGRG00001025021 #20	ENSCGRG00001022881 #20	ENSCGRG00001019835 #20	Ciao2b (ENSCGRG00001021991) #21	Rrad (ENSCGRG00001019311) #22	Cdh16 (ENSCGRG00001014582) #23	Pdp2 (ENSCGRG00001004299) #24	Car7 (ENSCGRG00001007396) #25	Nae1 (ENSCGRG00001024810) #26	Terb1 (ENSCGRG00001020854) #27	Dync1li2 (ENSCGRG00001024490) #28	Cmtm4 (ENSCGRG00001022900) #29	Cmtm3 (ENSCGRG00001009064) #30	ENSCGRG00001003108	ENSCGRG00001018415	Cklf (ENSCGRG00001011441) #31	Tk2 (ENSCGRG00001016771) #32	Bean1 (ENSCGRG00001019666) #34	Cdh5 (ENSCGRG00001016243) #35	Cdh11 (ENSCGRG00001019799) #37
Golden Hamster	MODERN SPECIES	701														ENSMAUG00000018660 #20	Ciao2b (ENSMAUG00000008806) #21	Rrad (ENSMAUG00000007171) #22	Cdh16 (ENSMAUG00000000808) #23	Pdp2 (ENSMAUG00000013617) #24	Car7 (ENSMAUG00000012285) #25	Nae1 (ENSMAUG00000013882) #26	Terb1 (ENSMAUG00000010324) #27	Dync1li2 (ENSMAUG00000011837) #28	Cmtm4 (ENSMAUG00000011070) #29	Cmtm3 (ENSMAUG00000010935) #30	ENSMAUG00000010482	Cklf (ENSMAUG00000019904) #31	Tk2 (ENSMAUG00000014656) #32	Bean1 (ENSMAUG00000018813) #34	Cdh5 (ENSMAUG00000016489) #35	Cdh11 (ENSMAUG00000015471) #37	ENSMAUG00000017111
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00960000190850
Prairie vole	MODERN SPECIES	12	Exoc3l (ENSMOCG00000017278)	Matcap1 (ENSMOCG00000020057)	Nol3 (ENSMOCG00000013389)	Hsf4 (ENSMOCG00000017670)	Fbxl8 (ENSMOCG00000005462)	Tradd (ENSMOCG00000014235)	B3gnt9 (ENSMOCG00000008518)	Phaf1 (ENSMOCG00000008111)	Cbfb (ENSMOCG00000013533)	Ces4a (ENSMOCG00000021744)	ENSMOCG00000018149	Ces2h (ENSMOCG00000001262)	ENSMOCG00000002668 #20	Ces2a (ENSMOCG00000003082) #20	Ciao2b (ENSMOCG00000006278) #21	Rrad (ENSMOCG00000013549) #22	Cdh16 (ENSMOCG00000016245) #23	Pdp2 (ENSMOCG00000017089) #24	Car7 (ENSMOCG00000018579) #25	Nae1 (ENSMOCG00000015303) #26	Terb1 (ENSMOCG00000002618) #27	Dync1li2 (ENSMOCG00000012762) #28	Cmtm4 (ENSMOCG00000020651) #29	Cmtm3 (ENSMOCG00000004281) #30	ENSMOCG00000022522	Cklf (ENSMOCG00000018064) #31	Tk2 (ENSMOCG00000010580) #32	Bean1 (ENSMOCG00000013884) #34	Cdh5 (ENSMOCG00000011293) #35	Cdh11 (ENSMOCG00000012927) #37	Cdh8 (ENSMOCG00000018034) ##37
Northern American deer mouse	MODERN SPECIES	18											ENSPEMG00000011212	ENSPEMG00000029309 #20	ENSPEMG00000016151 #20	ENSPEMG00000028589 #20	Ciao2b (ENSPEMG00000015548) #21	Rrad (ENSPEMG00000015328) #22	Cdh16 (ENSPEMG00000012028) #23	Pdp2 (ENSPEMG00000026870) #24	Car7 (ENSPEMG00000009187) #25	Nae1 (ENSPEMG00000004946) #26	Terb1 (ENSPEMG00000019123) #27	Dync1li2 (ENSPEMG00000005990) #28	Cmtm4 (ENSPEMG00000025674) #29	Cmtm3 (ENSPEMG00000002082) #30	ENSPEMG00000001497	ENSPEMG00000026503	Cklf (ENSPEMG00000000227) #31	Tk2 (ENSPEMG00000018292) #32	ENSPEMG00000017019 #34	Cdh5 (ENSPEMG00000014964) #35	ENSPEMG00000025771
Upper Galilee mountains blind mole rat	MODERN SPECIES	1323														ENSNGAG00000013675 #20	Ciao2b (ENSNGAG00000021344) #21	Rrad (ENSNGAG00000021455) #22	ENSNGAG00000003032 #23	ENSNGAG00000008908 #23	ENSNGAG00000014934 #24	Car7 (ENSNGAG00000015718) #25	Nae1 (ENSNGAG00000019672) #26	Terb1 (ENSNGAG00000008412) #27	Dync1li2 (ENSNGAG00000010836) #28	Cmtm4 (ENSNGAG00000016953) #29	Cmtm3 (ENSNGAG00000019696) #30
Lesser Egyptian jerboa	MODERN SPECIES	102											Ces4a (ENSJJAG00000022084)	ENSJJAG00000012198 #20	ENSJJAG00000020315 #20	ENSJJAG00000007124 #20	Ciao2b (ENSJJAG00000018405) #21	Rrad (ENSJJAG00000022190) #22	Cdh16 (ENSJJAG00000017353) #23	Pdp2 (ENSJJAG00000014880) #24	Car7 (ENSJJAG00000011532) #25	Nae1 (ENSJJAG00000020610) #26	ENSJJAG00000013872	Terb1 (ENSJJAG00000021091) #27	ENSJJAG00000004119	Dync1li2 (ENSJJAG00000014752) #28	Cmtm4 (ENSJJAG00000019660) #29	Cmtm3 (ENSJJAG00000020505) #30	ENSJJAG00000014677	ENSJJAG00000000150	Tk2 (ENSJJAG00000010805) #32	Bean1 (ENSJJAG00000011889) #34	Cdh5 (ENSJJAG00000018476) #35
Kangaroo rat	MODERN SPECIES	337	Tmem208 (ENSDORG00000013263)	Fbxl9 (ENSDORG00000015136)	Elmo3 (ENSDORG00000015132)	ENSDORG00000015131	Exoc3l (ENSDORG00000015130)	Matcap1 (ENSDORG00000015129)	Nol3 (ENSDORG00000026944)	Hsf4 (ENSDORG00000015128)	Fbxl8 (ENSDORG00000015127)	Tradd (ENSDORG00000015126)	B3gnt9 (ENSDORG00000030078)	Phaf1 (ENSDORG00000015125)	Cbfb (ENSDORG00000029036)	ENSDORG00000029390	ENSDORG00000013543 #21	Rrad (ENSDORG00000013540) #22	Pdp2 (ENSDORG00000024268) #24	Car7 (ENSDORG00000013532) #25	Nae1 (ENSDORG00000013530) #26	Dync1li2 (ENSDORG00000010219) #28	Cmtm3 (ENSDORG00000008429) #30	Tk2 (ENSDORG00000015017) #32	Bean1 (ENSDORG00000015016) #34	Cdh11 (ENSDORG00000002619) #37	Cdh8 (ENSDORG00000008036) ##37	ENSDORG00000023898	ENSDORG00000026429	Got2 (ENSDORG00000015354)	Slc38a7 (ENSDORG00000015353)	ENSDORG00000029061	ENSDORG00000002101
Lagomorpha	ANCESTRAL SPECIES	48															ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000160432 #30	ENSGT00940000163203	ENSGT00940000162264 #31	ENSGT00940000158005 #32	ENSGT00390000003283 #34	ENSGT00940000160587 #35	ENSGT00940000153691.a.a #37	ENSGT00960000186694	ENSGT00950000183082.a	ENSGT00940000158136
Pika	MODERN SPECIES	4891															ENSOPRG00000013479 #21	ENSOPRG00000013468 #22
Rabbit	MODERN SPECIES	16	ENSOCUG00000033074	CES4A (ENSOCUG00000005162)	CES3 (ENSOCUG00000005152)	ENSOCUG00000034887 #20	ENSOCUG00000017453 #20	ENSOCUG00000024128 #20	ENSOCUG00000025241 #20	ENSOCUG00000025273 #20	ENSOCUG00000023708 #20	ENSOCUG00000000591 #20	ENSOCUG00000012804 #20	ENSOCUG00000024499 #20	ENSOCUG00000024631	ENSOCUG00000025164 #20	ENSOCUG00000000588 #21	RRAD (ENSOCUG00000000585) #22	PDP2 (ENSOCUG00000000578) #24	CA7 (ENSOCUG00000027920) #25	NAE1 (ENSOCUG00000000573) #26	TERB1 (ENSOCUG00000000569) #27	DYNC1LI2 (ENSOCUG00000006143) #28	CMTM3 (ENSOCUG00000027757) #30	ENSOCUG00000026523	CKLF (ENSOCUG00000038857) #31	ENSOCUG00000014873 #32	ENSOCUG00000021527 #34	ENSOCUG00000039132	CDH5 (ENSOCUG00000010192) #35	CDH11 (ENSOCUG00000017019) #37	ENSOCUG00000013269	ENSOCUG00000022105