Murinae	ANCESTRAL SPECIES	15	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b ##20	ENSGT00940000153793.h.c.a.b.b #12	ENSGT00940000153793.h.c.a.b.a #13	ENSGT00940000153793.h.c.a.a.a.a.a.b #14	ENSGT00940000153793.h.c.a.a.a.a.a.a #15	ENSGT00940000153793.h.c.a.a.a.a.b #16	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203 #32	ENSGT00390000005715.b #34	ENSGT00940000162264 #35	ENSGT00940000158005 #36	ENSGT00390000003283 #37	ENSGT00940000160587
Rat	MODERN SPECIES	10						LOC100910259 (ENSRNOG00000069933) #12	LOC679368 (ENSRNOG00000048823) #13	Ces2g (ENSRNOG00000013808) #14	LOC679149 (ENSRNOG00000048039) #15	Ces2c-ps2 (ENSRNOG00000052151) #16	Ces2a (ENSRNOG00000011330) #17	Ces2e (ENSRNOG00000011635) #18	AABR07043429.1 (ENSRNOG00000049890) #19	Ces2j (ENSRNOG00000029744) #20	Ciao2b (ENSRNOG00000011865) #21	Rrad (ENSRNOG00000011901) #22	Cdh16 (ENSRNOG00000012222) #23	Pdp2 (ENSRNOG00000012343) #24	Car7 (ENSRNOG00000012371) #25	Nae1 (ENSRNOG00000033133) #26	Terb1 (ENSRNOG00000055097) #27	Dync1li2 (ENSRNOG00000025791) #28	Cmtm4 (ENSRNOG00000011009) #29	Cmtm3 (ENSRNOG00000010691) #30	LOC102554842 (ENSRNOG00000057998) #31	Cmtm1 (ENSRNOG00000057711) #32	ENSRNOG00000071201 #33	Cmtm2a (ENSRNOG00000025420) #34	Cklf (ENSRNOG00000012752) #35	Tk2 (ENSRNOG00000012853) #36	Bean1 (ENSRNOG00000066314) #37
Mus	ANCESTRAL SPECIES	6	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b ##20	ENSGT00940000153793.h.c.a.b.b #12	ENSGT00940000153793.h.c.a.b.a #13	ENSGT00940000153793.h.c.a.a.a.a.a.b #14	ENSGT00940000153793.h.c.a.a.a.a.a.a #15	ENSGT00940000153793.h.c.a.a.a.a.b #16	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00940000163203.b #32	ENSGT00390000005715.b #34	ENSGT00940000162264 #35	ENSGT00940000158005 #36	ENSGT00390000003283 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b ##20	ENSGT00940000153793.h.c.a.b.b #12	ENSGT00940000153793.h.c.a.b.a #13	ENSGT00940000153793.h.c.a.a.a.a.a.b #14	ENSGT00940000153793.h.c.a.a.a.a.a.a #15	ENSGT00940000153793.h.c.a.a.a.a.b #16	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #34	ENSGT00940000162264 #35	ENSGT00940000158005 #36	ENSGT00390000003283 #37	ENSGT00940000160587
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b ##20	ENSGT00940000153793.h.c.a.b.b #12	ENSGT00940000153793.h.c.a.b.a #13	ENSGT00940000153793.h.c.a.a.a.a.a.b.a.a #14	ENSGT00940000153793.h.c.a.a.a.a.a.a #15	ENSGT00940000153793.h.c.a.a.a.a.b #16	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #34	ENSGT00940000162264 #35	ENSGT00940000158005 #36	ENSGT00390000003283 #37	ENSGT00940000160587
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000004417.b	ENSGT00510000049353	ENSGT00940000158063	ENSGT00420000029943	ENSGT00390000002016	ENSGT00940000162243	ENSGT00940000153528.a.b.a.a	ENSGT00390000018132.j	ENSGT00940000162924	ENSGT00940000155200.m.b	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b ##20	ENSGT00940000153793.h.c.a.b.b #12	ENSGT00940000153793.h.c.a.b.a #13	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #34	ENSGT00940000162264 #35	ENSGT00940000158005 #36	ENSGT00390000003283 #37	ENSGT00940000160587
spretus	MODERN SPECIES	17	Hsf4 (MGP_SPRETEiJ_G0032587)	Fbxl8 (MGP_SPRETEiJ_G0032586)	Tradd (MGP_SPRETEiJ_G0032585)	B3gnt9 (MGP_SPRETEiJ_G0032584)	Phaf1 (MGP_SPRETEiJ_G0032583)	Cbfb (MGP_SPRETEiJ_G0032582)	Ces4a (MGP_SPRETEiJ_G0032581)	MGP_SPRETEiJ_G0032580	MGP_SPRETEiJ_G0032579	Ces2h (MGP_SPRETEiJ_G0032578)	Ces2g (MGP_SPRETEiJ_G0032577) ##20	Ces2f (MGP_SPRETEiJ_G0032576) #12	Ces2e (MGP_SPRETEiJ_G0032575) #13	MGP_SPRETEiJ_G0032574 #14	Ciao2b (MGP_SPRETEiJ_G0032571) #21	Rrad (MGP_SPRETEiJ_G0032570) #22	Cdh16 (MGP_SPRETEiJ_G0032569) #23	Pdp2 (MGP_SPRETEiJ_G0032568) #24	Car7 (MGP_SPRETEiJ_G0032567) #25	Nae1 (MGP_SPRETEiJ_G0032566) #26	Terb1 (MGP_SPRETEiJ_G0032565) #27	Dync1li2 (MGP_SPRETEiJ_G0032564) #28	Cmtm4 (MGP_SPRETEiJ_G0032563) #29	Cmtm3 (MGP_SPRETEiJ_G0032562) #30	Cmtm2b (MGP_SPRETEiJ_G0032561) #31	MGP_SPRETEiJ_G0032560 #32	MGP_SPRETEiJ_G0032559 #34	Cklf (MGP_SPRETEiJ_G0032558) #35	Tk2 (MGP_SPRETEiJ_G0032557) #36	Bean1 (MGP_SPRETEiJ_G0032556) #37	Cdh5 (MGP_SPRETEiJ_G0032555)
Steppe mouse	MODERN SPECIES	2604														ENSMSIG00000023192 #20	Ciao2b (ENSMSIG00000023211) #21	Rrad (ENSMSIG00000023236) #22	Cdh16 (ENSMSIG00000023256) #23	Pdp2 (ENSMSIG00000023367) #24	ENSMSIG00000023374	Car7 (ENSMSIG00000023381) #25	Nae1 (ENSMSIG00000023417) #26	Terb1 (ENSMSIG00000023542) #27	Dync1li2 (ENSMSIG00000023574) #28	Cmtm4 (ENSMSIG00000023615) #29	Cmtm3 (ENSMSIG00000023616) #30	ENSMSIG00000023656 #35	ENSMSIG00000023670 #34	ENSMSIG00000023711 #35	Tk2 (ENSMSIG00000023721) #36	ENSMSIG00000023751 #37	Cdh5 (ENSMSIG00000023895)
Mouse	MODERN SPECIES	17	Tradd (ENSMUSG00000031887)	B3gnt9 (ENSMUSG00000069920)	Phaf1 (ENSMUSG00000031889)	Cbfb (ENSMUSG00000031885)	Ces4a (ENSMUSG00000060560)	Ces3b (ENSMUSG00000062181)	Ces3a (ENSMUSG00000069922)	Ces2h (ENSMUSG00000091813)	Ces2g (ENSMUSG00000031877) ##20	Ces2f (ENSMUSG00000062826) #12	Ces2e (ENSMUSG00000031886) #13	Ces2c (ENSMUSG00000061825) #14	Ces2b (ENSMUSG00000050097) #15	Ces2a (ENSMUSG00000055730) #20	Ciao2b (ENSMUSG00000031879) #21	Rrad (ENSMUSG00000031880) #22	Cdh16 (ENSMUSG00000031881) #23	Pdp2 (ENSMUSG00000048371) #24	Car7 (ENSMUSG00000031883) #25	Nae1 (ENSMUSG00000031878) #26	Terb1 (ENSMUSG00000052616) #27	Dync1li2 (ENSMUSG00000035770) #28	Cmtm4 (ENSMUSG00000096188) #29	Cmtm3 (ENSMUSG00000031875) #30	Cmtm2b (ENSMUSG00000035785) #31	Cmtm1 (ENSMUSG00000110430) #32	Cmtm2a (ENSMUSG00000074127) #34	Cklf (ENSMUSG00000054400) #35	Tk2 (ENSMUSG00000035824) #36	Bean1 (ENSMUSG00000031872) #37	Cdh5 (ENSMUSG00000031871)
Ryukyu mouse	MODERN SPECIES	17	Hsf4 (MGP_CAROLIEiJ_G0031469)	Fbxl8 (MGP_CAROLIEiJ_G0031468)	Tradd (MGP_CAROLIEiJ_G0031467)	B3gnt9 (MGP_CAROLIEiJ_G0031466)	Phaf1 (MGP_CAROLIEiJ_G0031465)	Cbfb (MGP_CAROLIEiJ_G0031464)	Ces4a (MGP_CAROLIEiJ_G0031463)	MGP_CAROLIEiJ_G0031462	Ces2h (MGP_CAROLIEiJ_G0031461)	MGP_CAROLIEiJ_G0031460 #18	Ces2g (MGP_CAROLIEiJ_G0031459) ##20	Ces2f (MGP_CAROLIEiJ_G0031458) #12	Ces2e (MGP_CAROLIEiJ_G0031457) #13	Ces2c (MGP_CAROLIEiJ_G0031456) #14	Ciao2b (MGP_CAROLIEiJ_G0031454) #21	Rrad (MGP_CAROLIEiJ_G0031453) #22	Cdh16 (MGP_CAROLIEiJ_G0031452) #23	Pdp2 (MGP_CAROLIEiJ_G0031451) #24	Car7 (MGP_CAROLIEiJ_G0031450) #25	Nae1 (MGP_CAROLIEiJ_G0031449) #26	Terb1 (MGP_CAROLIEiJ_G0031448) #27	Dync1li2 (MGP_CAROLIEiJ_G0031447) #28	Cmtm4 (MGP_CAROLIEiJ_G0031446) #29	Cmtm3 (MGP_CAROLIEiJ_G0031445) #30	Cmtm2b (MGP_CAROLIEiJ_G0031444) #31	MGP_CAROLIEiJ_G0031443 #32	MGP_CAROLIEiJ_G0031442 #34	Cklf (MGP_CAROLIEiJ_G0031441) #35	Tk2 (MGP_CAROLIEiJ_G0031440) #36	MGP_CAROLIEiJ_G0031439 #37	Cdh5 (MGP_CAROLIEiJ_G0031438)
Shrew mouse	MODERN SPECIES	12	Tradd (MGP_PahariEiJ_G0023067)	B3gnt9 (MGP_PahariEiJ_G0023066)	Phaf1 (MGP_PahariEiJ_G0023065)	Cbfb (MGP_PahariEiJ_G0023064)	Ces4a (MGP_PahariEiJ_G0023063)	MGP_PahariEiJ_G0023062	MGP_PahariEiJ_G0023061	Ces2h (MGP_PahariEiJ_G0023060)	Ces2g (MGP_PahariEiJ_G0023059) ##20	Ces2f (MGP_PahariEiJ_G0023058) #12	Ces2e (MGP_PahariEiJ_G0023057) #13	MGP_PahariEiJ_G0023056 #14	MGP_PahariEiJ_G0023054 #15	MGP_PahariEiJ_G0023055 #15	Ciao2b (MGP_PahariEiJ_G0023052) #21	Rrad (MGP_PahariEiJ_G0023051) #22	Cdh16 (MGP_PahariEiJ_G0023050) #23	Pdp2 (MGP_PahariEiJ_G0023049) #24	Car7 (MGP_PahariEiJ_G0023048) #25	MGP_PahariEiJ_G0023047 #26	Terb1 (MGP_PahariEiJ_G0023046) #27	Dync1li2 (MGP_PahariEiJ_G0023045) #28	Cmtm4 (MGP_PahariEiJ_G0023044) #29	Cmtm3 (MGP_PahariEiJ_G0023043) #30	Cmtm2b (MGP_PahariEiJ_G0023042) #31	MGP_PahariEiJ_G0023041 #32	MGP_PahariEiJ_G0023040 #32	Cmtm2a (MGP_PahariEiJ_G0023039) #34	MGP_PahariEiJ_G0023038 #35	Tk2 (MGP_PahariEiJ_G0023037) #36	Bean1 (MGP_PahariEiJ_G0023036) #37