Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00940000166016	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Amniota	ANCESTRAL SPECIES	25	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000171246	ENSGT01030000235283	ENSGT00940000158339	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Mammalia	ANCESTRAL SPECIES	13	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Theria	ANCESTRAL SPECIES	17	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000153793 #20	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a.n #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT01090000260388	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a.n #16	ENSGT00390000018132 #17	ENSGT00940000153793.q #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a.n #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793.q #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a.n #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793.q #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a.n #16	ENSGT00390000018132 #17	ENSGT00940000153314.a.a #18	ENSGT00940000155200 #19	ENSGT00940000153793.q #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Narwhal	MODERN SPECIES	296	ELMO3 (ENSMMNG00015002794) #7	ENSMMNG00015002857 #8	EXOC3L1 (ENSMMNG00015002888) #9	MATCAP1 (ENSMMNG00015002942) #10	ENSMMNG00015002974 #11	HSF4 (ENSMMNG00015003012) #12	FBXL8 (ENSMMNG00015003059) #13	TRADD (ENSMMNG00015003080) #14	B3GNT9 (ENSMMNG00015003108) #15	PHAF1 (ENSMMNG00015003125) #16	CBFB (ENSMMNG00015003148) #17	ENSMMNG00015003160 #18	ENSMMNG00015003177 #19	CES2 (ENSMMNG00015003204) #20	CIAO2B (ENSMMNG00015003223) #21	RRAD (ENSMMNG00015003240) #22	CDH16 (ENSMMNG00015003293) #23	PDP2 (ENSMMNG00015003408) #24	CA7 (ENSMMNG00015003431) #25	NAE1 (ENSMMNG00015003479) #26	TERB1 (ENSMMNG00015003570) #27	DYNC1LI2 (ENSMMNG00015003708) #28	CMTM4 (ENSMMNG00015003772) #29	CMTM3 (ENSMMNG00015003810) #30	ENSMMNG00015003846 #31	ENSMMNG00015003867 #32	CKLF (ENSMMNG00015003920) #33	TK2 (ENSMMNG00015003990) #34	ENSMMNG00015004024 #35	BEAN1 (ENSMMNG00015004035) #36	CDH5 (ENSMMNG00015004064) #37
Beluga whale	MODERN SPECIES	12	E2F4 (ENSDLEG00000002500) #8	EXOC3L1 (ENSDLEG00000002535) #9	KIAA0895L (ENSDLEG00000002558) #10	NOL3 (ENSDLEG00000002571) #11	HSF4 (ENSDLEG00000002590) #12	FBXL8 (ENSDLEG00000002619) #13	ENSDLEG00000002626	TRADD (ENSDLEG00000002663) #14	B3GNT9 (ENSDLEG00000002671) #15	PHAF1 (ENSDLEG00000002707) #16	ENSDLEG00000002836	ENSDLEG00000002849 #18	ENSDLEG00000002860 #19	CES2 (ENSDLEG00000002869) #20	FAM96B (ENSDLEG00000002890) #21	RRAD (ENSDLEG00000002898) #22	ENSDLEG00000002905 #23	PDP2 (ENSDLEG00000002910) #24	CA7 (ENSDLEG00000002922) #25	NAE1 (ENSDLEG00000002985) #26	TERB1 (ENSDLEG00000003009) #27	DYNC1LI2 (ENSDLEG00000003027) #28	CMTM4 (ENSDLEG00000003041) #29	CMTM3 (ENSDLEG00000003058) #30	CMTM2 (ENSDLEG00000003067) #31	ENSDLEG00000003082 #33	TK2 (ENSDLEG00000003131) #34	BEAN1 (ENSDLEG00000003154) #36	CDH5 (ENSDLEG00000003166) #37
Vaquita	MODERN SPECIES	10	TMEM208 (ENSPSNG00000018943)	ENSPSNG00000018895	ENSPSNG00000018855	ELMO3 (ENSPSNG00000018256) #7	ENSPSNG00000018189 #8	EXOC3L1 (ENSPSNG00000018065) #9	MATCAP1 (ENSPSNG00000018018) #10	ENSPSNG00000017959 #11	HSF4 (ENSPSNG00000017904) #12	FBXL8 (ENSPSNG00000017855) #13	B3GNT9 (ENSPSNG00000017784) #15	PHAF1 (ENSPSNG00000017735) #16	CBFB (ENSPSNG00000017662) #17	CES2 (ENSPSNG00000017596) #20	CIAO2B (ENSPSNG00000017545) #21	RRAD (ENSPSNG00000017497) #22	CDH16 (ENSPSNG00000016664) #23	PDP2 (ENSPSNG00000016552) #24	CA7 (ENSPSNG00000016396) #25	NAE1 (ENSPSNG00000016216) #26	TERB1 (ENSPSNG00000016014) #27	DYNC1LI2 (ENSPSNG00000015820) #28	CMTM4 (ENSPSNG00000015603) #29	CMTM3 (ENSPSNG00000015485) #30	ENSPSNG00000015268 #31	ENSPSNG00000015231	ENSPSNG00000015162 #32	CKLF (ENSPSNG00000014869) #33	TK2 (ENSPSNG00000014283) #34	BEAN1 (ENSPSNG00000014181) #36	CDH5 (ENSPSNG00000013935) #37
Dolphin	MODERN SPECIES	1310			ENSTTRG00000010287	ELMO3 (ENSTTRG00000010275) #7	E2F4 (ENSTTRG00000010268) #8	EXOC3L1 (ENSTTRG00000010260) #9	MATCAP1 (ENSTTRG00000010254) #10	ENSTTRG00000010251 #11	HSF4 (ENSTTRG00000010241) #12	FBXL8 (ENSTTRG00000010233) #13	TRADD (ENSTTRG00000010223) #14	PHAF1 (ENSTTRG00000010207) #16	CBFB (ENSTTRG00000010200) #17	ENSTTRG00000010185	CIAO2B (ENSTTRG00000010181) #21	RRAD (ENSTTRG00000010173) #22	CDH16 (ENSTTRG00000010162) #23	PDP2 (ENSTTRG00000010159) #24	CA7 (ENSTTRG00000010154) #25	NAE1 (ENSTTRG00000010124) #26
Sperm whale	MODERN SPECIES	161														CES2 (ENSPCTG00005022558) #20	CIAO2B (ENSPCTG00005022559) #21	RRAD (ENSPCTG00005022561) #22	CDH16 (ENSPCTG00005022562) #23	PDP2 (ENSPCTG00005022564) #24	CA7 (ENSPCTG00005022566) #25	ENSPCTG00005022567 #26
Blue whale	MODERN SPECIES	10	TMEM208 (ENSBMSG00010017359)	ENSBMSG00010017277	ELMO3 (ENSBMSG00010017180) #7	ENSBMSG00010017137 #8	EXOC3L1 (ENSBMSG00010017075) #9	MATCAP1 (ENSBMSG00010017022) #10	NOL3 (ENSBMSG00010016979) #11	HSF4 (ENSBMSG00010016951) #12	FBXL8 (ENSBMSG00010016923) #13	TRADD (ENSBMSG00010016899) #14	B3GNT9 (ENSBMSG00010016876) #15	ENSBMSG00010016852 #16	CBFB (ENSBMSG00010016805) #17	CES2 (ENSBMSG00010016703) #20	CIAO2B (ENSBMSG00010016650) #21	RRAD (ENSBMSG00010016627) #22	CDH16 (ENSBMSG00010015858) #23	PDP2 (ENSBMSG00010015722) #24	ENSBMSG00010015711	CA7 (ENSBMSG00010015659) #25	NAE1 (ENSBMSG00010015508) #26	ENSBMSG00010015462	TERB1 (ENSBMSG00010015382) #27	DYNC1LI2 (ENSBMSG00010015269) #28	CMTM4 (ENSBMSG00010015196) #29	CMTM3 (ENSBMSG00010015159) #30	ENSBMSG00010015115 #31	ENSBMSG00010015063 #32	ENSBMSG00010015037	CKLF (ENSBMSG00010014882) #33	TK2 (ENSBMSG00010014551) #34
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Yarkand deer	MODERN SPECIES	27	ENSCHYG00000024305	ELMO3 (ENSCHYG00000024035) #7	E2F4 (ENSCHYG00000023962) #8	EXOC3L1 (ENSCHYG00000023914) #9	MATCAP1 (ENSCHYG00000023823) #10	NOL3 (ENSCHYG00000023759) #11	ENSCHYG00000023612 #12	TRADD (ENSCHYG00000023549) #14	B3GNT9 (ENSCHYG00000023536) #15	PHAF1 (ENSCHYG00000023443) #16	CBFB (ENSCHYG00000023398) #17	CES4A (ENSCHYG00000023100)	CES3 (ENSCHYG00000022898) #19	CES2 (ENSCHYG00000022832) #20	ENSCHYG00000022775 #21	RRAD (ENSCHYG00000022736) #22	CDH16 (ENSCHYG00000022298) #23	PDP2 (ENSCHYG00000022241) #24	CA7 (ENSCHYG00000022143) #25	NAE1 (ENSCHYG00000021779) #26	TERB1 (ENSCHYG00000021711) #27	DYNC1LI2 (ENSCHYG00000021245) #28	CMTM4 (ENSCHYG00000021086) #29	CMTM3 (ENSCHYG00000020938) #30	CMTM2 (ENSCHYG00000020882) #31	ENSCHYG00000020818 #32	CKLF (ENSCHYG00000020361) #33	TK2 (ENSCHYG00000019962) #34	ENSCHYG00000019922 #35	BEAN1 (ENSCHYG00000019755) #36	ENSCHYG00000019729
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Siberian musk deer	MODERN SPECIES	125	ELMO3 (ENSMMSG00000002100) #7	E2F4 (ENSMMSG00000002147) #8	EXOC3L1 (ENSMMSG00000002185) #9	MATCAP1 (ENSMMSG00000002222) #10	NOL3 (ENSMMSG00000002238) #11	HSF4 (ENSMMSG00000002260) #12	FBXL8 (ENSMMSG00000002277) #13	TRADD (ENSMMSG00000002296) #14	B3GNT9 (ENSMMSG00000002307) #15	PHAF1 (ENSMMSG00000002333) #16	CBFB (ENSMMSG00000002381) #17	CES4A (ENSMMSG00000002458)	CES3 (ENSMMSG00000002817) #19	CES2 (ENSMMSG00000002881) #20	CIAO2B (ENSMMSG00000002906) #21	RRAD (ENSMMSG00000002919) #22	CDH16 (ENSMMSG00000003008) #23	PDP2 (ENSMMSG00000003451) #24	CA7 (ENSMMSG00000003460) #25	NAE1 (ENSMMSG00000003506) #26	TERB1 (ENSMMSG00000003643) #27	DYNC1LI2 (ENSMMSG00000003693) #28	CMTM4 (ENSMMSG00000003747) #29	CMTM3 (ENSMMSG00000003767) #30	ENSMMSG00000003792 #31	ENSMMSG00000003808 #32	CKLF (ENSMMSG00000003823) #33	TK2 (ENSMMSG00000003859) #34	BEAN1 (ENSMMSG00000003905) #36	CDH5 (ENSMMSG00000003914) #37	CDH11 (ENSMMSG00000003928)
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36
Bos	ANCESTRAL SPECIES	4	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000163203.f #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35
Bos_b	ANCESTRAL SPECIES		ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000163203.f #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35
Cow	MODERN SPECIES	9	ELMO3 (ENSBTAG00000001286) #7	E2F4 (ENSBTAG00000012063) #8	EXOC3L1 (ENSBTAG00000012035) #9	MATCAP1 (ENSBTAG00000003521) #10	NOL3 (ENSBTAG00000003519) #11	HSF4 (ENSBTAG00000003514) #12	FBXL8 (ENSBTAG00000023632) #13	TRADD (ENSBTAG00000012642) #14	B3GNT9 (ENSBTAG00000049665) #15	PHAF1 (ENSBTAG00000005058) #16	CBFB (ENSBTAG00000016103) #17	CES4A (ENSBTAG00000038325)	CES3 (ENSBTAG00000040413) #19	CES2 (ENSBTAG00000005093) #20	CIAO2B (ENSBTAG00000013931) #21	RRAD (ENSBTAG00000013929) #22	CDH16 (ENSBTAG00000009585) #23	PDP2 (ENSBTAG00000046708) #24	CA7 (ENSBTAG00000020889) #25	ENSBTAG00000049893	NAE1 (ENSBTAG00000010132) #26	TERB1 (ENSBTAG00000016438) #27	DYNC1LI2 (ENSBTAG00000000458) #28	CMTM4 (ENSBTAG00000001104) #29	CMTM3 (ENSBTAG00000054188) #30	CMTM2 (ENSBTAG00000032576) #31	ENSBTAG00000054627 #32	ENSBTAG00000054171	CKLF (ENSBTAG00000038858) #33	ENSBTAG00000049507 #35	TK2 (ENSBTAG00000005152) #34
Hybrid Bos Indicus	MODERN SPECIES	9	ELMO3 (ENSBIXG00005021218) #7	E2F4 (ENSBIXG00005021168) #8	EXOC3L1 (ENSBIXG00005005746) #9	MATCAP1 (ENSBIXG00005021118) #10	ENSBIXG00005021092 #11	HSF4 (ENSBIXG00005021067) #12	FBXL8 (ENSBIXG00005020996) #13	TRADD (ENSBIXG00005020967) #14	B3GNT9 (ENSBIXG00005005675) #15	PHAF1 (ENSBIXG00005020907) #16	CBFB (ENSBIXG00005003530) #17	CES4A (ENSBIXG00005020830)	CES3 (ENSBIXG00005003507) #19	CES2 (ENSBIXG00005020621) #20	CIAO2B (ENSBIXG00005003480) #21	RRAD (ENSBIXG00005020587) #22	CDH16 (ENSBIXG00005020523) #23	PDP2 (ENSBIXG00005020253) #24	CA7 (ENSBIXG00005003374) #25	NAE1 (ENSBIXG00005020228) #26	ENSBIXG00005020202	TERB1 (ENSBIXG00005003341) #27	DYNC1LI2 (ENSBIXG00005020114) #28	ENSBIXG00005019997	CMTM3 (ENSBIXG00005019988) #30	CMTM2 (ENSBIXG00005003252) #31	ENSBIXG00005019867 #32	ENSBIXG00005019855 #32	CKLF (ENSBIXG00005005529) #33	ENSBIXG00005003209	TK2 (ENSBIXG00005019627) #34
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000163203.f #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35
Wild yak	MODERN SPECIES	818	ELMO3 (ENSBMUG00000004292) #7	E2F4 (ENSBMUG00000004337) #8	EXOC3L1 (ENSBMUG00000004386) #9	MATCAP1 (ENSBMUG00000004402) #10	ENSBMUG00000004421 #11	HSF4 (ENSBMUG00000004436) #12	FBXL8 (ENSBMUG00000004457) #13	TRADD (ENSBMUG00000004465) #14	B3GNT9 (ENSBMUG00000004470) #15	PHAF1 (ENSBMUG00000004491) #16	ENSBMUG00000004501 #17	CES4A (ENSBMUG00000004549)	CES3 (ENSBMUG00000004603) #19	CES2 (ENSBMUG00000004631) #20	ENSBMUG00000004656 #21	RRAD (ENSBMUG00000004672) #22	CDH16 (ENSBMUG00000004891) #23	PDP2 (ENSBMUG00000004973) #24	CA7 (ENSBMUG00000004993) #25	NAE1 (ENSBMUG00000005037) #26	TERB1 (ENSBMUG00000005064) #27	DYNC1LI2 (ENSBMUG00000005139) #28	CMTM4 (ENSBMUG00000005178) #29	CMTM3 (ENSBMUG00000005192) #30	CMTM2 (ENSBMUG00000005199) #31	ENSBMUG00000005220 #32	CKLF (ENSBMUG00000005291) #33	ENSBMUG00000005319	TK2 (ENSBMUG00000005344) #34	ENSBMUG00000005359 #35	BEAN1 (ENSBMUG00000005363) #36
Domestic yak	MODERN SPECIES	12	ELMO3 (ENSBGRG00000026869) #7	E2F4 (ENSBGRG00000026873) #8	EXOC3L1 (ENSBGRG00000026874) #9	MATCAP1 (ENSBGRG00000026876) #10	NOL3 (ENSBGRG00000026877) #11	HSF4 (ENSBGRG00000026879) #12	FBXL8 (ENSBGRG00000026881) #13	TRADD (ENSBGRG00000026883) #14	B3GNT9 (ENSBGRG00000026884) #15	PHAF1 (ENSBGRG00000026886) #16	CBFB (ENSBGRG00000026888) #17	CES4A (ENSBGRG00000026891)	CES3 (ENSBGRG00000026893) #19	CES2 (ENSBGRG00000026894) #20	ENSBGRG00000026895 #21	RRAD (ENSBGRG00000026896) #22	CDH16 (ENSBGRG00000026897) #23	ENSBGRG00000026900	PDP2 (ENSBGRG00000026901) #24	CA7 (ENSBGRG00000026902) #25	NAE1 (ENSBGRG00000026903) #26	TERB1 (ENSBGRG00000026906) #27	DYNC1LI2 (ENSBGRG00000026908) #28	CMTM4 (ENSBGRG00000026912) #29	CMTM3 (ENSBGRG00000026915) #30	CMTM2 (ENSBGRG00000026918) #31	ENSBGRG00000026920 #32	ENSBGRG00000026921 #32	CKLF (ENSBGRG00000026922) #33	TK2 (ENSBGRG00000026924) #34	ENSBGRG00000026925 #35
American bison	MODERN SPECIES	3211	E2F4 (ENSBBBG00000001117) #8	EXOC3L1 (ENSBBBG00000001140) #9	MATCAP1 (ENSBBBG00000001162) #10	NOL3 (ENSBBBG00000001188) #11	HSF4 (ENSBBBG00000001199) #12	FBXL8 (ENSBBBG00000014921) #13	TRADD (ENSBBBG00000007361) #14	B3GNT9 (ENSBBBG00000003675) #15	PHAF1 (ENSBBBG00000014888) #16	ENSBBBG00000003663 #17	CES4A (ENSBBBG00000007359)	ENSBBBG00000014799 #19	ENSBBBG00000014790 #19	CES2 (ENSBBBG00000014778) #20	CIAO2B (ENSBBBG00000014743) #21	RRAD (ENSBBBG00000014738) #22	CDH16 (ENSBBBG00000014712) #23	PDP2 (ENSBBBG00000009129) #24	CA7 (ENSBBBG00000002864) #25	NAE1 (ENSBBBG00000007603) #26	TERB1 (ENSBBBG00000003383) #27	DYNC1LI2 (ENSBBBG00000003358) #28	CMTM3 (ENSBBBG00000009121) #30	CMTM2 (ENSBBBG00000014393) #31	ENSBBBG00000014390 #32	CKLF (ENSBBBG00000003289) #33	ENSBBBG00000003275	TK2 (ENSBBBG00000003273) #34	BEAN1 (ENSBBBG00000014334) #36	CDH5 (ENSBBBG00000003264) #37	CDH11 (ENSBBBG00000014303)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.e #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00980000202834	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Rambouillet Sheep	MODERN SPECIES	5	ELMO3 (ENSOARG00020019220) #7	ENSOARG00020019148 #8	EXOC3L1 (ENSOARG00020019062) #9	MATCAP1 (ENSOARG00020018962) #10	ENSOARG00020018928 #11	HSF4 (ENSOARG00020018866) #12	FBXL8 (ENSOARG00020018825) #13	TRADD (ENSOARG00020018788) #14	B3GNT9 (ENSOARG00020018774) #15	PHAF1 (ENSOARG00020018589) #16	CBFB (ENSOARG00020018510) #17	CES4A (ENSOARG00020018190)	CES3 (ENSOARG00020017918) #19	CES2 (ENSOARG00020017788) #20	CIAO2B (ENSOARG00020017741) #21	RRAD (ENSOARG00020017701) #22	CDH16 (ENSOARG00020017267) #23	PDP2 (ENSOARG00020017226) #24	CA7 (ENSOARG00020017141) #25	NAE1 (ENSOARG00020016752) #26	TERB1 (ENSOARG00020016574) #27	DYNC1LI2 (ENSOARG00020016257) #28	ENSOARG00020016184	CMTM4 (ENSOARG00020016101) #29	CMTM3 (ENSOARG00020016016) #30	CMTM2 (ENSOARG00020015951) #31	ENSOARG00020015819 #32	CKLF (ENSOARG00020015354) #33	TK2 (ENSOARG00020014347) #34	ENSOARG00020014298	BEAN1 (ENSOARG00020014207) #36
Goat	MODERN SPECIES	9	ELMO3 (ENSCHIG00000026708) #7	E2F4 (ENSCHIG00000016663) #8	EXOC3L1 (ENSCHIG00000024506) #9	MATCAP1 (ENSCHIG00000015211) #10	ENSCHIG00000017201 #11	HSF4 (ENSCHIG00000003853) #12	FBXL8 (ENSCHIG00000015480) #13	TRADD (ENSCHIG00000024921) #14	B3GNT9 (ENSCHIG00000014321) #15	PHAF1 (ENSCHIG00000020303) #16	CBFB (ENSCHIG00000020674) #17	CES4A (ENSCHIG00000016586)	CES3 (ENSCHIG00000024208) #19	CES2 (ENSCHIG00000019303) #20	CIAO2B (ENSCHIG00000013136) #21	RRAD (ENSCHIG00000014464) #22	CDH16 (ENSCHIG00000023982) #23	PDP2 (ENSCHIG00000007829) #24	CA7 (ENSCHIG00000021493) #25	NAE1 (ENSCHIG00000009134) #26	TERB1 (ENSCHIG00000026054) #27	DYNC1LI2 (ENSCHIG00000014435) #28	CMTM4 (ENSCHIG00000021995) #29	CMTM3 (ENSCHIG00000019372) #30	CMTM2 (ENSCHIG00000025225) #31	CKLF (ENSCHIG00000023696) #33	TK2 (ENSCHIG00000025188) #34	BEAN1 (ENSCHIG00000002056) #36	CDH5 (ENSCHIG00000015547) #37	CDH11 (ENSCHIG00000010210)	ENSCHIG00000020417
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT00390000004417.b #10	ENSGT01030000234613.a.b #9	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Arabian camel	MODERN SPECIES	35	ELMO3 (ENSCDRG00005010079) #7	E2F4 (ENSCDRG00005009938) #8	MATCAP1 (ENSCDRG00005009884) #10	EXOC3L1 (ENSCDRG00005009698) #9	ENSCDRG00005009628 #11	HSF4 (ENSCDRG00005009366) #12	FBXL8 (ENSCDRG00005009311) #13	TRADD (ENSCDRG00005009217) #14	B3GNT9 (ENSCDRG00005009199) #15	PHAF1 (ENSCDRG00005009104) #16	CBFB (ENSCDRG00005008908) #17	CES4A (ENSCDRG00005008394)	CES3 (ENSCDRG00005008158) #19	CES2 (ENSCDRG00005007948) #20	CIAO2B (ENSCDRG00005007905) #21	RRAD (ENSCDRG00005007840) #22	CDH16 (ENSCDRG00005007160) #23	PDP2 (ENSCDRG00005007117) #24	CA7 (ENSCDRG00005007047) #25	NAE1 (ENSCDRG00005006757) #26	TERB1 (ENSCDRG00005006615) #27	DYNC1LI2 (ENSCDRG00005006446) #28	CMTM4 (ENSCDRG00005006365) #29	ENSCDRG00005006295 #30	ENSCDRG00005006191 #31	ENSCDRG00005006173 #32	CKLF (ENSCDRG00005005979) #33	TK2 (ENSCDRG00005005648) #34	ENSCDRG00005005615 #35	BEAN1 (ENSCDRG00005005591) #36	CDH5 (ENSCDRG00005005572) #37
Suina	ANCESTRAL SPECIES	2	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Pig	MODERN SPECIES	14	FHOD1 (ENSSSCG00000026116)	ENSSSCG00000002790	ENSSSCG00000031199	ELMO3 (ENSSSCG00000002786) #7	E2F4 (ENSSSCG00000002787) #8	EXOC3L1 (ENSSSCG00000002788) #9	MATCAP1 (ENSSSCG00000032443) #10	HSF4 (ENSSSCG00000040125) #12	FBXL8 (ENSSSCG00000002793) #13	TRADD (ENSSSCG00000036321) #14	B3GNT9 (ENSSSCG00000040139) #15	PHAF1 (ENSSSCG00000040749) #16	CBFB (ENSSSCG00000033811) #17	CES3 (ENSSSCG00000024476) #19	CIAO2B (ENSSSCG00000033027) #21	RRAD (ENSSSCG00000036060) #22	CDH16 (ENSSSCG00000022721) #23	PDP2 (ENSSSCG00000036067) #24	CA7 (ENSSSCG00000038785) #25	TERB1 (ENSSSCG00000035639) #27	DYNC1LI2 (ENSSSCG00000036210) #28	CMTM4 (ENSSSCG00000032632) #29	ENSSSCG00000038151 #30	CMTM2 (ENSSSCG00000031837) #31	ENSSSCG00000035857	CKLF (ENSSSCG00000031161) #33	TK2 (ENSSSCG00000038053) #34	BEAN1 (ENSSSCG00000033191) #36	CDH5 (ENSSSCG00000035772) #37	CDH11 (ENSSSCG00000002795)	CDH8 (ENSSSCG00000040687)
Chacoan peccary	MODERN SPECIES	106	ENSCWAG00000003654	ELMO3 (ENSCWAG00000020517) #7	E2F4 (ENSCWAG00000020485) #8	EXOC3L1 (ENSCWAG00000020467) #9	MATCAP1 (ENSCWAG00000020443) #10	NOL3 (ENSCWAG00000020427) #11	HSF4 (ENSCWAG00000020397) #12	FBXL8 (ENSCWAG00000020383) #13	TRADD (ENSCWAG00000020373) #14	B3GNT9 (ENSCWAG00000020367) #15	PHAF1 (ENSCWAG00000020358) #16	CBFB (ENSCWAG00000020337) #17	ENSCWAG00000020325	CES3 (ENSCWAG00000020290) #19	CIAO2B (ENSCWAG00000020272) #21	RRAD (ENSCWAG00000020265) #22	CDH16 (ENSCWAG00000019851) #23	PDP2 (ENSCWAG00000019805) #24	CA7 (ENSCWAG00000019754) #25	NAE1 (ENSCWAG00000019642) #26	TERB1 (ENSCWAG00000019565) #27	DYNC1LI2 (ENSCWAG00000019474) #28	CMTM4 (ENSCWAG00000019389) #29	CMTM3 (ENSCWAG00000019334) #30	CMTM2 (ENSCWAG00000019269) #31	ENSCWAG00000019243 #32	CKLF (ENSCWAG00000019069) #33	TK2 (ENSCWAG00000018712) #34	BEAN1 (ENSCWAG00000018659) #36	CDH5 (ENSCWAG00000018573) #37	CDH11 (ENSCWAG00000018480)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00980000202834
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00980000202834	ENSGT00390000003283 #36
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000154694.k.a	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000154694.k.a	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Dog	MODERN SPECIES	33	ENSCAFG00845009436	ELMO3 (ENSCAFG00845009511) #7	ENSCAFG00845009673 #8	EXOC3L1 (ENSCAFG00845009747) #9	MATCAP1 (ENSCAFG00845009874) #10	HSF4 (ENSCAFG00845009966) #11	HSF4 (ENSCAFG00845010066) #12	TRADD (ENSCAFG00845010243) #14	FBXL8 (ENSCAFG00845010281) #13	B3GNT9 (ENSCAFG00845010321) #15	PHAF1 (ENSCAFG00845010359) #16	CBFB (ENSCAFG00845010432) #17	ENSCAFG00845010462	CES2 (ENSCAFG00845010523) #20	CIAO2B (ENSCAFG00845010671) #21	RRAD (ENSCAFG00845010705) #22	CDH16 (ENSCAFG00845010781) #23	PDP2 (ENSCAFG00845011036) #24	ENSCAFG00845011063 #25	NAE1 (ENSCAFG00845011147) #26	TERB1 (ENSCAFG00845011301) #27	DYNC1LI2 (ENSCAFG00845011482) #28	CMTM4 (ENSCAFG00845011632) #29	ENSCAFG00845011708 #30	CMTM2 (ENSCAFG00845011750) #31	CMTM1 (ENSCAFG00845011763) #32	CKLF (ENSCAFG00845011794) #33	ENSCAFG00845011815	TK2 (ENSCAFG00845011863) #34	BEAN1 (ENSCAFG00845012054) #36	CDH5 (ENSCAFG00845012097) #37
Dingo	MODERN SPECIES	373	ENSCAFG00020018090	ELMO3 (ENSCAFG00020018084) #7	ENSCAFG00020018080 #8	EXOC3L1 (ENSCAFG00020018073) #9	MATCAP1 (ENSCAFG00020018068) #10	ENSCAFG00020018066 #11	HSF4 (ENSCAFG00020018058) #12	FBXL8 (ENSCAFG00020018057) #13	TRADD (ENSCAFG00020018054) #14	B3GNT9 (ENSCAFG00020018052) #15	PHAF1 (ENSCAFG00020018043) #16	CBFB (ENSCAFG00020018039) #17	ENSCAFG00020018031	CES2 (ENSCAFG00020018024) #20	CIAO2B (ENSCAFG00020018022) #21	RRAD (ENSCAFG00020018006) #22	CDH16 (ENSCAFG00020017962) #23	CA7 (ENSCAFG00020017940) #25	NAE1 (ENSCAFG00020017915) #26	TERB1 (ENSCAFG00020017881) #27	DYNC1LI2 (ENSCAFG00020017504) #28	CMTM4 (ENSCAFG00020017480) #29	ENSCAFG00020017477 #30	ENSCAFG00020017472 #31	ENSCAFG00020017460 #32	ENSCAFG00020017456	CKLF (ENSCAFG00020017449) #33	TK2 (ENSCAFG00020017385) #34	BEAN1 (ENSCAFG00020017374) #36	ENSCAFG00020017370	CDH5 (ENSCAFG00020017365) #37
Red fox	MODERN SPECIES	86	ENSVVUG00000011596	ELMO3 (ENSVVUG00000011584) #7	E2F4 (ENSVVUG00000011569) #8	EXOC3L1 (ENSVVUG00000011555) #9	MATCAP1 (ENSVVUG00000011547) #10	ENSVVUG00000011543 #11	HSF4 (ENSVVUG00000011195) #12	FBXL8 (ENSVVUG00000011188) #13	TRADD (ENSVVUG00000011183) #14	B3GNT9 (ENSVVUG00000011177) #15	PHAF1 (ENSVVUG00000011171) #16	ENSVVUG00000011164 #17	ENSVVUG00000011153	CES2 (ENSVVUG00000011116) #20	CIAO2B (ENSVVUG00000011091) #21	RRAD (ENSVVUG00000011080) #22	CDH16 (ENSVVUG00000011064) #23	PDP2 (ENSVVUG00000011059) #24	CA7 (ENSVVUG00000011048) #25	ENSVVUG00000006977 #26	TERB1 (ENSVVUG00000006796) #27	ENSVVUG00000006788 #30	ENSVVUG00000006787 #31	ENSVVUG00000006779 #32	TK2 (ENSVVUG00000006577) #34	BEAN1 (ENSVVUG00000006571) #36	CDH5 (ENSVVUG00000006436) #37	CDH11 (ENSVVUG00000006413)
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Giant Panda	MODERN SPECIES	3	ENSAMEG00000017316	ELMO3 (ENSAMEG00000017281) #7	E2F4 (ENSAMEG00000017275) #8	EXOC3L1 (ENSAMEG00000017273) #9	MATCAP1 (ENSAMEG00000017266) #10	ENSAMEG00000017263 #11	HSF4 (ENSAMEG00000017238) #12	FBXL8 (ENSAMEG00000017236) #13	TRADD (ENSAMEG00000017232) #14	B3GNT9 (ENSAMEG00000026064) #15	PHAF1 (ENSAMEG00000017219) #16	CBFB (ENSAMEG00000031354) #17	CES3 (ENSAMEG00000017207) #19	CES2 (ENSAMEG00000017174) #20	CIAO2B (ENSAMEG00000025163) #21	RRAD (ENSAMEG00000024334) #22	CDH16 (ENSAMEG00000017136) #23	PDP2 (ENSAMEG00000019711) #24	CA7 (ENSAMEG00000017119) #25	NAE1 (ENSAMEG00000017095) #26	TERB1 (ENSAMEG00000017093) #27	DYNC1LI2 (ENSAMEG00000017056) #28	CMTM4 (ENSAMEG00000017049) #29	ENSAMEG00000017042 #30	ENSAMEG00000017039 #31	ENSAMEG00000017010 #32	CKLF (ENSAMEG00000017037) #33	TK2 (ENSAMEG00000017012) #34	BEAN1 (ENSAMEG00000017005) #36	CDH5 (ENSAMEG00000016973) #37	CDH11 (ENSAMEG00000001479)
Ursus	ANCESTRAL SPECIES	41	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00990000205363	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Polar bear	MODERN SPECIES	245	SLC9A5 (ENSUMAG00000019821)	TMEM208 (ENSUMAG00000019884)	ENSUMAG00000019889	ELMO3 (ENSUMAG00000019904) #7	E2F4 (ENSUMAG00000019980) #8	EXOC3L1 (ENSUMAG00000019991) #9	MATCAP1 (ENSUMAG00000020005) #10	HSF4 (ENSUMAG00000020034) #12	TRADD (ENSUMAG00000020250) #14	B3GNT9 (ENSUMAG00000020254) #15	PHAF1 (ENSUMAG00000020258) #16	ENSUMAG00000020272 #17	ENSUMAG00000020276 #19	CES2 (ENSUMAG00000020281) #20	CIAO2B (ENSUMAG00000020292) #21	RRAD (ENSUMAG00000020298) #22	CDH16 (ENSUMAG00000020327) #23	PDP2 (ENSUMAG00000020386) #24	CA7 (ENSUMAG00000020388) #25	NAE1 (ENSUMAG00000020485) #26	TERB1 (ENSUMAG00000020892) #27	DYNC1LI2 (ENSUMAG00000020926) #28	CMTM4 (ENSUMAG00000021107) #29	ENSUMAG00000021108 #30	ENSUMAG00000021111 #31	ENSUMAG00000021113 #32	TK2 (ENSUMAG00000021116) #34	BEAN1 (ENSUMAG00000021121) #36	CDH5 (ENSUMAG00000021130) #37	CDH11 (ENSUMAG00000021136)
American black bear	MODERN SPECIES	1815													CES3 (ENSUAMG00000006691) #19	CES2 (ENSUAMG00000006686) #20	CIAO2B (ENSUAMG00000006685) #21	RRAD (ENSUAMG00000006684) #22	CDH16 (ENSUAMG00000006666) #23	PDP2 (ENSUAMG00000006660) #24	CA7 (ENSUAMG00000006657) #25	NAE1 (ENSUAMG00000003165) #26	TERB1 (ENSUAMG00000002979) #27	DYNC1LI2 (ENSUAMG00000002965) #28
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Ferret	MODERN SPECIES	174	ENSMPUG00000005910	ELMO3 (ENSMPUG00000005677) #7	E2F4 (ENSMPUG00000005564) #8	EXOC3L1 (ENSMPUG00000005549) #9	MATCAP1 (ENSMPUG00000005537) #10	ENSMPUG00000005530 #11	HSF4 (ENSMPUG00000005418) #12	FBXL8 (ENSMPUG00000005412) #13	TRADD (ENSMPUG00000005387) #14	B3GNT9 (ENSMPUG00000019893) #15	PHAF1 (ENSMPUG00000005369) #16	CBFB (ENSMPUG00000005362) #17	CES3 (ENSMPUG00000005350) #19	CES2 (ENSMPUG00000005332) #20	CIAO2B (ENSMPUG00000005303) #21	RRAD (ENSMPUG00000005296) #22	CDH16 (ENSMPUG00000005284) #23	PDP2 (ENSMPUG00000019891) #24	CA7 (ENSMPUG00000005278) #25	NAE1 (ENSMPUG00000005264) #26	DYNC1LI2 (ENSMPUG00000005134) #28	CMTM4 (ENSMPUG00000005117) #29	CMTM3 (ENSMPUG00000005060) #30	CMTM2 (ENSMPUG00000005048) #31	ENSMPUG00000005046	CKLF (ENSMPUG00000005042) #33	TK2 (ENSMPUG00000004932) #34	BEAN1 (ENSMPUG00000004927) #36	CDH5 (ENSMPUG00000004913) #37	CDH11 (ENSMPUG00000004907)	ENSMPUG00000004902
American mink	MODERN SPECIES	2	ENSNVIG00000010464	ELMO3 (ENSNVIG00000010475) #7	E2F4 (ENSNVIG00000010516) #8	EXOC3L1 (ENSNVIG00000010533) #9	MATCAP1 (ENSNVIG00000010557) #10	ENSNVIG00000010569 #11	HSF4 (ENSNVIG00000010576) #12	FBXL8 (ENSNVIG00000010608) #13	TRADD (ENSNVIG00000010625) #14	B3GNT9 (ENSNVIG00000010650) #15	PHAF1 (ENSNVIG00000010652) #16	CBFB (ENSNVIG00000010680) #17	CES3 (ENSNVIG00000010721) #19	CES2 (ENSNVIG00000010773) #20	CIAO2B (ENSNVIG00000010786) #21	RRAD (ENSNVIG00000010800) #22	CDH16 (ENSNVIG00000010820) #23	PDP2 (ENSNVIG00000010937) #24	CA7 (ENSNVIG00000010944) #25	NAE1 (ENSNVIG00000010966) #26	TERB1 (ENSNVIG00000011040) #27	DYNC1LI2 (ENSNVIG00000011086) #28	CMTM4 (ENSNVIG00000011144) #29	CMTM3 (ENSNVIG00000011166) #30	ENSNVIG00000011246 #31	ENSNVIG00000011266 #32	CKLF (ENSNVIG00000011277) #33	TK2 (ENSNVIG00000011338) #34	BEAN1 (ENSNVIG00000011640) #36	CDH5 (ENSNVIG00000011716) #37	CDH11 (ENSNVIG00000011851)
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00980000202834	ENSGT00390000003283 #36
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
lion	MODERN SPECIES	15	ELMO3 (ENSPLOG00000014820) #7	E2F4 (ENSPLOG00000014749) #8	EXOC3L1 (ENSPLOG00000014607) #9	MATCAP1 (ENSPLOG00000014489) #10	ENSPLOG00000014452 #11	HSF4 (ENSPLOG00000014216) #12	FBXL8 (ENSPLOG00000014173) #13	TRADD (ENSPLOG00000014099) #14	B3GNT9 (ENSPLOG00000014082) #15	PHAF1 (ENSPLOG00000014041) #16	ENSPLOG00000013982 #17	CES4A (ENSPLOG00000013533)	CES3 (ENSPLOG00000013294) #19	ENSPLOG00000013241	CIAO2B (ENSPLOG00000013197) #21	RRAD (ENSPLOG00000013148) #22	CDH16 (ENSPLOG00000012664) #23	PDP2 (ENSPLOG00000012568) #24	CA7 (ENSPLOG00000012441) #25	NAE1 (ENSPLOG00000012202) #26	TERB1 (ENSPLOG00000012036) #27	DYNC1LI2 (ENSPLOG00000011824) #28	CMTM4 (ENSPLOG00000011730) #29	CMTM3 (ENSPLOG00000011656) #30	CMTM2 (ENSPLOG00000011590) #31	ENSPLOG00000011501 #32	CKLF (ENSPLOG00000011254) #33	TK2 (ENSPLOG00000016167) #34	ENSPLOG00000016105 #35	ENSPLOG00000016090	BEAN1 (ENSPLOG00000016041) #36
leopard	MODERN SPECIES	28	ENSPPRG00000022903	ENSPPRG00000022970	ELMO3 (ENSPPRG00000023242) #7	E2F4 (ENSPPRG00000024105) #8	MATCAP1 (ENSPPRG00000021263) #10	ENSPPRG00000020293 #11	HSF4 (ENSPPRG00000019220) #12	FBXL8 (ENSPPRG00000016650) #13	TRADD (ENSPPRG00000014449) #14	PHAF1 (ENSPPRG00000013795) #16	CBFB (ENSPPRG00000013240) #17	CES4A (ENSPPRG00000012641)	CES3 (ENSPPRG00000010944) #19	CES2 (ENSPPRG00000009977) #20	CIAO2B (ENSPPRG00000009809) #21	RRAD (ENSPPRG00000009391) #22	CDH16 (ENSPPRG00000009161) #23	PDP2 (ENSPPRG00000016536) #24	CA7 (ENSPPRG00000005536) #25	NAE1 (ENSPPRG00000005214) #26	TERB1 (ENSPPRG00000003366) #27	DYNC1LI2 (ENSPPRG00000001766) #28	CMTM4 (ENSPPRG00000000628) #29	CMTM3 (ENSPPRG00000000068) #30	CMTM2 (ENSPPRG00000023855) #31	CKLF (ENSPPRG00000022221) #33	TK2 (ENSPPRG00000016580) #34	BEAN1 (ENSPPRG00000012066) #36	CDH5 (ENSPPRG00000011703) #37	CDH11 (ENSPPRG00000010969)	CDH8 (ENSPPRG00000009615)
Tiger	MODERN SPECIES	320	TMEM208 (ENSPTIG00000010543)	ENSPTIG00000010332	ELMO3 (ENSPTIG00000009736) #7	E2F4 (ENSPTIG00000009532) #8	MATCAP1 (ENSPTIG00000008588) #10	ENSPTIG00000008436 #11	HSF4 (ENSPTIG00000007435) #12	FBXL8 (ENSPTIG00000007308) #13	TRADD (ENSPTIG00000007077) #14	PHAF1 (ENSPTIG00000006322) #16	ENSPTIG00000006285 #17	CES4A (ENSPTIG00000005543)	CES3 (ENSPTIG00000004489) #19	CES2 (ENSPTIG00000004063) #20	CIAO2B (ENSPTIG00000003290) #21	RRAD (ENSPTIG00000001809) #22	CDH16 (ENSPTIG00000019612) #23	PDP2 (ENSPTIG00000006204) #24	CA7 (ENSPTIG00000019280) #25	NAE1 (ENSPTIG00000018443) #26	TERB1 (ENSPTIG00000018200) #27	DYNC1LI2 (ENSPTIG00000017737) #28	CMTM4 (ENSPTIG00000017425) #29	ENSPTIG00000017394 #30	CMTM2 (ENSPTIG00000017331) #31	CKLF (ENSPTIG00000017049) #33	TK2 (ENSPTIG00000016239) #34	ENSPTIG00000016124 #36	CDH5 (ENSPTIG00000015927) #37	CDH11 (ENSPTIG00000015577)	CDH8 (ENSPTIG00000015093)
Cat	MODERN SPECIES	246	ELMO3 (ENSFCAG00000009269) #7	E2F4 (ENSFCAG00000009268) #8	EXOC3L1 (ENSFCAG00000009267) #9	MATCAP1 (ENSFCAG00000009265) #10	NOL3 (ENSFCAG00000009264) #11	HSF4 (ENSFCAG00000014099) #12	FBXL8 (ENSFCAG00000009263) #13	TRADD (ENSFCAG00000043839) #14	B3GNT9 (ENSFCAG00000046265) #15	CE2H16orf70 (ENSFCAG00000009260) #16	CBFB (ENSFCAG00000045823) #17	CES4A (ENSFCAG00000003809)	ENSFCAG00000001200 #19	CES2 (ENSFCAG00000003806) #20	CIAO2B (ENSFCAG00000029216) #21	RRAD (ENSFCAG00000026895) #22	CDH16 (ENSFCAG00000012774) #23	PDP2 (ENSFCAG00000006269) #24	CA7 (ENSFCAG00000012773) #25	NAE1 (ENSFCAG00000012769) #26	TERB1 (ENSFCAG00000027927) #27	DYNC1LI2 (ENSFCAG00000015252) #28	CMTM4 (ENSFCAG00000015251) #29	CMTM3 (ENSFCAG00000031222) #30	ENSFCAG00000015249 #31	ENSFCAG00000048102 #32	CKLF (ENSFCAG00000033590) #33	TK2 (ENSFCAG00000015246) #34	ENSFCAG00000053350	BEAN1 (ENSFCAG00000015245) #36	CDH5 (ENSFCAG00000015244) #37
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000164375	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000160212	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Microbat	MODERN SPECIES	1211	FHOD1 (ENSMLUG00000001154)	TMEM208 (ENSMLUG00000001149)	ENSMLUG00000001143	ELMO3 (ENSMLUG00000001134) #7	E2F4 (ENSMLUG00000023162) #8	EXOC3L1 (ENSMLUG00000001121) #9	MATCAP1 (ENSMLUG00000011150) #10	ENSMLUG00000011138 #11	HSF4 (ENSMLUG00000011083) #12	FBXL8 (ENSMLUG00000011063) #13	TRADD (ENSMLUG00000011054) #14	B3GNT9 (ENSMLUG00000023514) #15	ENSMLUG00000011012 #16	CBFB (ENSMLUG00000010999) #17	CIAO2B (ENSMLUG00000014953) #21	RRAD (ENSMLUG00000013700) #22	CDH16 (ENSMLUG00000013705) #23	PDP2 (ENSMLUG00000014958) #24	CA7 (ENSMLUG00000012984) #25	NAE1 (ENSMLUG00000012976) #26	DYNC1LI2 (ENSMLUG00000012957) #28	CMTM4 (ENSMLUG00000014426) #29	CMTM3 (ENSMLUG00000014424) #30	ENSMLUG00000025102 #31	TK2 (ENSMLUG00000001071) #34
Greater horseshoe bat	MODERN SPECIES	6	TMEM208 (ENSRFEG00010014189)	ENSRFEG00010014162	ENSRFEG00010014143	ELMO3 (ENSRFEG00010014029) #7	E2F4 (ENSRFEG00010013945) #8	EXOC3L1 (ENSRFEG00010013737) #9	MATCAP1 (ENSRFEG00010013678) #10	NOL3 (ENSRFEG00010013567) #11	HSF4 (ENSRFEG00010013178) #12	FBXL8 (ENSRFEG00010013130) #13	TRADD (ENSRFEG00010013012) #14	B3GNT9 (ENSRFEG00010013003) #15	PHAF1 (ENSRFEG00010012954) #16	CBFB (ENSRFEG00010012858) #17	CIAO2B (ENSRFEG00010012765) #21	RRAD (ENSRFEG00010012702) #22	CDH16 (ENSRFEG00010012368) #23	CA7 (ENSRFEG00010012260) #25	NAE1 (ENSRFEG00010011905) #26	TERB1 (ENSRFEG00010011648) #27	DYNC1LI2 (ENSRFEG00010011471) #28	CMTM4 (ENSRFEG00010011382) #29	CMTM3 (ENSRFEG00010011242) #30	CMTM2 (ENSRFEG00010011120) #31	ENSRFEG00010011039 #32	CKLF (ENSRFEG00010010959) #33	TK2 (ENSRFEG00010010695) #34	BEAN1 (ENSRFEG00010010604) #36	CDH5 (ENSRFEG00010010526) #37	ENSRFEG00010010500	CDH11 (ENSRFEG00010010420)
Megabat	MODERN SPECIES	1651								ENSPVAG00000000405 #11	HSF4 (ENSPVAG00000000402) #12	TRADD (ENSPVAG00000000401) #14	PHAF1 (ENSPVAG00000000399) #16	CBFB (ENSPVAG00000000397) #17	ENSPVAG00000000395	ENSPVAG00000000394	CIAO2B (ENSPVAG00000000393) #21	RRAD (ENSPVAG00000000391) #22	CDH16 (ENSPVAG00000000389) #23	PDP2 (ENSPVAG00000000387) #24	CA7 (ENSPVAG00000000385) #25	NAE1 (ENSPVAG00000000380) #26
Equus	ANCESTRAL SPECIES	20	ENSGT00390000008139	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Donkey	MODERN SPECIES	20	TMEM208 (ENSEASG00005012536)	ELMO3 (ENSEASG00005011163) #7	E2F4 (ENSEASG00005011078) #8	EXOC3L1 (ENSEASG00005011071) #9	MATCAP1 (ENSEASG00005011064) #10	ENSEASG00005011062 #11	HSF4 (ENSEASG00005011004) #12	FBXL8 (ENSEASG00005034607) #13	TRADD (ENSEASG00005011002) #14	B3GNT9 (ENSEASG00005034023) #15	PHAF1 (ENSEASG00005010953) #16	CBFB (ENSEASG00005010936) #17	CES3 (ENSEASG00005010928) #19	CES2 (ENSEASG00005010903) #20	CIAO2B (ENSEASG00005031727) #21	RRAD (ENSEASG00005010896) #22	CDH16 (ENSEASG00005010892) #23	PDP2 (ENSEASG00005025884) #24	CA7 (ENSEASG00005010888) #25	NAE1 (ENSEASG00005010886) #26	TERB1 (ENSEASG00005010885) #27	DYNC1LI2 (ENSEASG00005010884) #28	ENSEASG00005010883 #29	CMTM3 (ENSEASG00005023812) #30	CMTM2 (ENSEASG00005027672) #31	ENSEASG00005010877 #33	TK2 (ENSEASG00005010876) #34	ENSEASG00005028335 #35	ENSEASG00005029427 #36	CDH5 (ENSEASG00005010871) #37	ENSEASG00005010867
Horse	MODERN SPECIES	22	SLC9A5 (ENSECAG00000020279)	FHOD1 (ENSECAG00000013595)	ELMO3 (ENSECAG00000006824) #7	E2F4 (ENSECAG00000015595) #8	EXOC3L1 (ENSECAG00000001268) #9	MATCAP1 (ENSECAG00000024529) #10	HSF4 (ENSECAG00000016708) #12	FBXL8 (ENSECAG00000034017) #13	TRADD (ENSECAG00000013754) #14	B3GNT9 (ENSECAG00000006409) #15	PHAF1 (ENSECAG00000022219) #16	CBFB (ENSECAG00000014879) #17	CES3 (ENSECAG00000010334) #19	CIAO2B (ENSECAG00000010902) #21	CES2 (ENSECAG00000012061)	RRAD (ENSECAG00000006674) #22	CDH16 (ENSECAG00000009969) #23	PDP2 (ENSECAG00000006359) #24	CA7 (ENSECAG00000024943) #25	NAE1 (ENSECAG00000021954) #26	TERB1 (ENSECAG00000017824) #27	DYNC1LI2 (ENSECAG00000020218) #28	CMTM3 (ENSECAG00000017746) #30	CMTM4 (ENSECAG00000018456) #29	CMTM2 (ENSECAG00000016272) #31	ENSECAG00000028022 #32	CKLF (ENSECAG00000026929) #33	ENSECAG00000029867 #35	TK2 (ENSECAG00000007170) #34	BEAN1 (ENSECAG00000007077) #36	CDH5 (ENSECAG00000018507) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159836 #22
Hedgehog	MODERN SPECIES	6124												ENSEEUG00000009450 #17	ENSEEUG00000009405	CES3 (ENSEEUG00000009357) #19	CES2 (ENSEEUG00000009266) #20	ENSEEUG00000009248 #22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000153793 #20	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834
Primates	ANCESTRAL SPECIES	21	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00910000146698	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00910000146698	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00910000148240
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00910000146698	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00910000148240
Vervet Monkey	MODERN SPECIES	24	ST3GAL2 (ENSCSAG00000004458)	DDX19A (ENSCSAG00000004462)	DDX19B (ENSCSAG00000004469)	AARS1 (ENSCSAG00000004476)	ENSCSAG00000004484	PDPR (ENSCSAG00000004514)	GLG1 (ENSCSAG00000004537)	RFWD3 (ENSCSAG00000004544)	MLKL (ENSCSAG00000004551)	FA2H (ENSCSAG00000004572)	WDR59 (ENSCSAG00000004590)	ZNRF1 (ENSCSAG00000018468)	ENSCSAG00000004599 #20	ENSCSAG00000004603 #20	CIAO2B (ENSCSAG00000004606) #21	RRAD (ENSCSAG00000004610) #22	CDH16 (ENSCSAG00000004614) #23	PDP2 (ENSCSAG00000018467) #24	CA7 (ENSCSAG00000004615) #25	NAE1 (ENSCSAG00000004620) #26	TERB1 (ENSCSAG00000004627) #27	DYNC1LI2 (ENSCSAG00000004634) #28	CMTM4 (ENSCSAG00000004637) #29	CMTM3 (ENSCSAG00000004645) #30	CMTM2 (ENSCSAG00000004650) #31	CMTM1 (ENSCSAG00000004657) #32	CKLF (ENSCSAG00000004662) #33	TK2 (ENSCSAG00000004665) #34	BEAN1 (ENSCSAG00000004668) #36	CDH5 (ENSCSAG00000004675) #37	CDH11 (ENSCSAG00000004679)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00910000146698	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00910000148240
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.f #17	ENSGT00940000155200 #19	ENSGT00910000146698	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.c #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00910000148240
Pig-tailed macaque	MODERN SPECIES	178	E2F4 (ENSMNEG00000025909) #8	EXOC3L1 (ENSMNEG00000030051) #9	MATCAP1 (ENSMNEG00000040545) #10	ENSMNEG00000030684 #11	HSF4 (ENSMNEG00000038020) #12	FBXL8 (ENSMNEG00000016307) #13	TRADD (ENSMNEG00000018376) #14	B3GNT9 (ENSMNEG00000006041) #15	PHAF1 (ENSMNEG00000033604) #16	CBFB (ENSMNEG00000028964) #17	ENSMNEG00000037132 #19	ENSMNEG00000031450	ENSMNEG00000033775	CES2 (ENSMNEG00000032898) #20	CIAO2B (ENSMNEG00000034933) #21	RRAD (ENSMNEG00000041942) #22	CDH16 (ENSMNEG00000043878) #23	PDP2 (ENSMNEG00000015467) #24	CA7 (ENSMNEG00000003832) #25	NAE1 (ENSMNEG00000043855) #26	TERB1 (ENSMNEG00000028756) #27	DYNC1LI2 (ENSMNEG00000026978) #28	CMTM4 (ENSMNEG00000031182) #29	CMTM3 (ENSMNEG00000028761) #30	CMTM2 (ENSMNEG00000037612) #31	CMTM1 (ENSMNEG00000038140) #32	CKLF (ENSMNEG00000041932) #33	ENSMNEG00000000811	TK2 (ENSMNEG00000033766) #34	BEAN1 (ENSMNEG00000037073) #36	ENSMNEG00000017786
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.f #17	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203.c #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Rhesus	MODERN SPECIES	12	ELMO3 (ENSMMUG00000020259) #7	E2F4 (ENSMMUG00000020258) #8	EXOC3L1 (ENSMMUG00000020254) #9	MATCAP1 (ENSMMUG00000020266) #10	NOL3 (ENSMMUG00000020268) #11	HSF4 (ENSMMUG00000005906) #12	FBXL8 (ENSMMUG00000050693) #13	TRADD (ENSMMUG00000060314) #14	B3GNT9 (ENSMMUG00000007559) #15	PHAF1 (ENSMMUG00000018102) #16	CBFB (ENSMMUG00000058815) #17	ENSMMUG00000054948 #17	ENSMMUG00000064237	CES2 (ENSMMUG00000022825) #20	CIAO2B (ENSMMUG00000010919) #21	RRAD (ENSMMUG00000049583) #22	CDH16 (ENSMMUG00000016727) #23	PDP2 (ENSMMUG00000016726) #24	CA7 (ENSMMUG00000062543) #25	ENSMMUG00000054235	NAE1 (ENSMMUG00000006752) #26	TERB1 (ENSMMUG00000064302) #27	DYNC1LI2 (ENSMMUG00000011268) #28	CMTM3 (ENSMMUG00000020847) #30	ENSMMUG00000049484	CMTM2 (ENSMMUG00000000032) #31	CMTM1 (ENSMMUG00000029108) #32	CKLF (ENSMMUG00000064294) #32	TK2 (ENSMMUG00000000029) #34	BEAN1 (ENSMMUG00000064932) #36	CDH5 (ENSMMUG00000023525) #37
Crab-eating macaque	MODERN SPECIES	12	FHOD1 (ENSMFAG00000046038)	TMEM208 (ENSMFAG00000042618)	ENSMFAG00000041969	ELMO3 (ENSMFAG00000038390) #7	EXOC3L1 (ENSMFAG00000002581) #9	MATCAP1 (ENSMFAG00000038714) #10	NOL3 (ENSMFAG00000043853) #11	HSF4 (ENSMFAG00000032308) #12	FBXL8 (ENSMFAG00000001028) #13	B3GNT9 (ENSMFAG00000051218) #15	PHAF1 (ENSMFAG00000031327) #16	ENSMFAG00000058735	CBFB (ENSMFAG00000001241) #17	CES2 (ENSMFAG00000032416) #20	CIAO2B (ENSMFAG00000001820) #21	RRAD (ENSMFAG00000032485) #22	CDH16 (ENSMFAG00000036946) #23	PDP2 (ENSMFAG00000028076) #24	CA7 (ENSMFAG00000042876) #25	NAE1 (ENSMFAG00000030456) #26	TERB1 (ENSMFAG00000025461) #27	DYNC1LI2 (ENSMFAG00000045659) #28	CMTM4 (ENSMFAG00000043754) #29	CMTM3 (ENSMFAG00000039621) #30	CMTM2 (ENSMFAG00000038509) #31	CMTM1 (ENSMFAG00000039438) #32	CKLF (ENSMFAG00000032896) #33	TK2 (ENSMFAG00000035489) #34	BEAN1 (ENSMFAG00000031444) #36	CDH5 (ENSMFAG00000038308) #37	ENSMFAG00000058689
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000033840	ELMO3 (ENSCATG00000034679) #7	E2F4 (ENSCATG00000042556) #8	EXOC3L1 (ENSCATG00000041980) #9	MATCAP1 (ENSCATG00000037134) #10	ENSCATG00000034821 #11	HSF4 (ENSCATG00000042580) #12	FBXL8 (ENSCATG00000038633) #13	TRADD (ENSCATG00000030076) #14	B3GNT9 (ENSCATG00000000540) #15	PHAF1 (ENSCATG00000033027) #16	CBFB (ENSCATG00000042676) #17	ENSCATG00000027954	CES2 (ENSCATG00000029478) #20	CIAO2B (ENSCATG00000032819) #21	RRAD (ENSCATG00000034562) #22	CDH16 (ENSCATG00000036211) #23	PDP2 (ENSCATG00000002549) #24	CA7 (ENSCATG00000030339) #25	NAE1 (ENSCATG00000036949) #26	TERB1 (ENSCATG00000035233) #27	DYNC1LI2 (ENSCATG00000040701) #28	CMTM4 (ENSCATG00000033128) #29	CMTM3 (ENSCATG00000041455) #30	CMTM2 (ENSCATG00000010944) #31	CMTM1 (ENSCATG00000030897) #32	CKLF (ENSCATG00000032887) #33	ENSCATG00000003083	TK2 (ENSCATG00000030807) #34	BEAN1 (ENSCATG00000040570) #36	CDH5 (ENSCATG00000037405) #37
Drill	MODERN SPECIES	966												ENSMLEG00000039327 #20	ENSMLEG00000029987 #20	ENSMLEG00000028475 #20	CIAO2B (ENSMLEG00000027683) #21	RRAD (ENSMLEG00000041845) #22	CDH16 (ENSMLEG00000020550) #23	PDP2 (ENSMLEG00000024589) #24	CA7 (ENSMLEG00000043036) #25	NAE1 (ENSMLEG00000036996) #26	TERB1 (ENSMLEG00000013883) #27	DYNC1LI2 (ENSMLEG00000028715) #28	CMTM4 (ENSMLEG00000034755) #29	CMTM3 (ENSMLEG00000036621) #30	CMTM2 (ENSMLEG00000034782) #31	CMTM1 (ENSMLEG00000031296) #32	CKLF (ENSMLEG00000031540) #33	ENSMLEG00000031447	TK2 (ENSMLEG00000030464) #34	BEAN1 (ENSMLEG00000034390) #36	CDH5 (ENSMLEG00000028105) #37
Olive baboon	MODERN SPECIES	9	FHOD1 (ENSPANG00000000605)	TMEM208 (ENSPANG00000029479)	ENSPANG00000031561	ELMO3 (ENSPANG00000005501) #7	E2F4 (ENSPANG00000016794) #8	EXOC3L1 (ENSPANG00000000502) #9	MATCAP1 (ENSPANG00000035304) #10	NOL3 (ENSPANG00000030797) #11	HSF4 (ENSPANG00000005017) #12	FBXL8 (ENSPANG00000013427) #13	TRADD (ENSPANG00000017334) #14	B3GNT9 (ENSPANG00000011657) #15	PHAF1 (ENSPANG00000018550) #16	CBFB (ENSPANG00000008068) #17	CIAO2B (ENSPANG00000013428) #21	RRAD (ENSPANG00000042893) #22	CDH16 (ENSPANG00000015586) #23	PDP2 (ENSPANG00000008640) #24	CA7 (ENSPANG00000019306) #25	NAE1 (ENSPANG00000017004) #26	TERB1 (ENSPANG00000019280) #27	DYNC1LI2 (ENSPANG00000025999) #28	CMTM4 (ENSPANG00000032610) #29	CMTM3 (ENSPANG00000001349) #30	CMTM1 (ENSPANG00000050617) #32	CKLF (ENSPANG00000007358) #33	TK2 (ENSPANG00000005246) #34	BEAN1 (ENSPANG00000017091) #36	CDH5 (ENSPANG00000022691) #37	ENSPANG00000043251	CDH11 (ENSPANG00000020810)
Rhinopithecus	ANCESTRAL SPECIES	25	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000153793.f #20	ENSGT00940000153793.e.b #20	ENSGT00940000153793.e.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT01090000260388	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00910000148240	ENSGT00940000160587 #37
Golden snub-nosed monkey	MODERN SPECIES	2988	TMEM208 (ENSRROG00000032781)	ENSRROG00000031712	ELMO3 (ENSRROG00000044911) #7	E2F4 (ENSRROG00000035670) #8	EXOC3L1 (ENSRROG00000040665) #9	MATCAP1 (ENSRROG00000012831) #10	ENSRROG00000033912 #11	HSF4 (ENSRROG00000042484) #12	FBXL8 (ENSRROG00000034560) #13	TRADD (ENSRROG00000001491) #14	ENSRROG00000031108 #16	CBFB (ENSRROG00000031552) #17	ENSRROG00000035237 #20	ENSRROG00000043998 #20	CIAO2B (ENSRROG00000044649) #21	RRAD (ENSRROG00000038070) #22	CDH16 (ENSRROG00000044530) #23	PDP2 (ENSRROG00000008872) #24	CA7 (ENSRROG00000040146) #25	NAE1 (ENSRROG00000035587) #26	TERB1 (ENSRROG00000044258) #27	DYNC1LI2 (ENSRROG00000037621) #28	CMTM4 (ENSRROG00000032309) #29	CMTM3 (ENSRROG00000028738) #30	CMTM2 (ENSRROG00000044646) #31	CMTM1 (ENSRROG00000031073) #32	ENSRROG00000022832	TK2 (ENSRROG00000036319) #34	BEAN1 (ENSRROG00000032441) #36	CDH5 (ENSRROG00000044851) #37	CDH11 (ENSRROG00000033813)
Black snub-nosed monkey	MODERN SPECIES	2086															CIAO2B (ENSRBIG00000033354) #21	RRAD (ENSRBIG00000042619) #22	CDH16 (ENSRBIG00000035045) #23	PDP2 (ENSRBIG00000001442) #24	CA7 (ENSRBIG00000044654) #25	NAE1 (ENSRBIG00000037891) #26	TERB1 (ENSRBIG00000038934) #27	DYNC1LI2 (ENSRBIG00000037890) #28	CMTM4 (ENSRBIG00000044758) #29	CMTM3 (ENSRBIG00000041789) #30	CMTM2 (ENSRBIG00000023923) #31	ENSRBIG00000027670	CMTM1 (ENSRBIG00000032189) #32	TK2 (ENSRBIG00000040251) #34	BEAN1 (ENSRBIG00000017447) #36	ENSRBIG00000015140	CDH5 (ENSRBIG00000040912) #37
Hominoidea	ANCESTRAL SPECIES	9	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793.c #20	ENSGT00910000146698	ENSGT00940000153793.d #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Gibbon	MODERN SPECIES	11	ENSNLEG00000004435	ELMO3 (ENSNLEG00000004393) #7	E2F4 (ENSNLEG00000004342) #8	EXOC3L1 (ENSNLEG00000004364) #9	MATCAP1 (ENSNLEG00000004356) #10	HSF4 (ENSNLEG00000004338) #12	FBXL8 (ENSNLEG00000004335) #13	TRADD (ENSNLEG00000004328) #14	PHAF1 (ENSNLEG00000004306) #16	CBFB (ENSNLEG00000004277) #17	ENSNLEG00000004228	CES3 (ENSNLEG00000004206) #19	CES2 (ENSNLEG00000030391) #20	ENSNLEG00000004181 #20	CIAO2B (ENSNLEG00000004172) #21	RRAD (ENSNLEG00000004167) #22	CDH16 (ENSNLEG00000004109) #23	CA7 (ENSNLEG00000030802) #25	NAE1 (ENSNLEG00000004047) #26	TERB1 (ENSNLEG00000004017) #27	DYNC1LI2 (ENSNLEG00000004011) #28	ENSNLEG00000034866	ENSNLEG00000004009 #29	ENSNLEG00000004003 #30	CMTM2 (ENSNLEG00000004001) #31	CMTM1 (ENSNLEG00000003970) #32	ENSNLEG00000030398	TK2 (ENSNLEG00000035698) #34	BEAN1 (ENSNLEG00000033811) #36	CDH5 (ENSNLEG00000003928) #37	CDH11 (ENSNLEG00000003882)
Hominidae	ANCESTRAL SPECIES	9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.o #19	ENSGT00940000153793.c #20	ENSGT00940000155200.p #19	ENSGT00910000146698	ENSGT00940000153793.d #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Orangutan	MODERN SPECIES	7	E2F4 (ENSPPYG00000007445) #8	EXOC3L1 (ENSPPYG00000007444) #9	MATCAP1 (ENSPPYG00000007443) #10	ENSPPYG00000007442 #11	HSF4 (ENSPPYG00000007441) #12	FBXL8 (ENSPPYG00000041495) #13	TRADD (ENSPPYG00000007440) #14	B3GNT9 (ENSPPYG00000007439) #15	PHAF1 (ENSPPYG00000007438) #16	CBFB (ENSPPYG00000007437) #17	CES4A (ENSPPYG00000007436)	ENSPPYG00000007435 #19	CES3 (ENSPPYG00000041300) #19	ENSPPYG00000007434 #20	CIAO2B (ENSPPYG00000041569) #21	RRAD (ENSPPYG00000007432) #22	CDH16 (ENSPPYG00000007431) #23	PDP2 (ENSPPYG00000007430) #24	CA7 (ENSPPYG00000007429) #25	NAE1 (ENSPPYG00000007428) #26	TERB1 (ENSPPYG00000007427) #27	DYNC1LI2 (ENSPPYG00000007426) #28	CMTM4 (ENSPPYG00000007425) #29	CMTM3 (ENSPPYG00000007424) #30	ENSPPYG00000030480 #31	CMTM1 (ENSPPYG00000031840) #32	CKLF (ENSPPYG00000037421) #33	TK2 (ENSPPYG00000007419) #34	BEAN1 (ENSPPYG00000037890) #36	CDH5 (ENSPPYG00000007416) #37	CDH11 (ENSPPYG00000007415)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.o #19	ENSGT00940000153793.d #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Gorilla	MODERN SPECIES	7	MATCAP1 (ENSGGOG00000023625) #10	NOL3 (ENSGGOG00000012278) #11	HSF4 (ENSGGOG00000011899) #12	FBXL8 (ENSGGOG00000011893) #13	ENSGGOG00000011883 #14	B3GNT9 (ENSGGOG00000040003) #15	PHAF1 (ENSGGOG00000011866) #16	CBFB (ENSGGOG00000043175) #17	ENSGGOG00000008270	CES3 (ENSGGOG00000008262) #19	ENSGGOG00000040837 #19	ENSGGOG00000043733	ENSGGOG00000043424	CES2 (ENSGGOG00000008251) #20	CIAO2B (ENSGGOG00000012355) #21	RRAD (ENSGGOG00000012351) #22	CDH16 (ENSGGOG00000012332) #23	PDP2 (ENSGGOG00000012328) #24	CA7 (ENSGGOG00000014562) #25	NAE1 (ENSGGOG00000006065) #26	TERB1 (ENSGGOG00000003333) #27	DYNC1LI2 (ENSGGOG00000005216) #28	ENSGGOG00000013881 #29	ENSGGOG00000027122 #30	CMTM2 (ENSGGOG00000004163) #31	CMTM1 (ENSGGOG00000022030) #32	TK2 (ENSGGOG00000003430) #34	BEAN1 (ENSGGOG00000003427) #36	CDH5 (ENSGGOG00000005712) #37	CDH11 (ENSGGOG00000003009)	ENSGGOG00000043422
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.o.a #19	ENSGT00940000153793.d #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Human	MODERN SPECIES	7	ELMO3 (ENSG00000102890) #7	E2F4 (ENSG00000205250) #8	EXOC3L1 (ENSG00000179044) #9	MATCAP1 (ENSG00000196123) #10	NOL3 (ENSG00000140939) #11	HSF4 (ENSG00000102878) #12	FBXL8 (ENSG00000135722) #13	TRADD (ENSG00000102871) #14	B3GNT9 (ENSG00000237172) #15	PHAF1 (ENSG00000125149) #16	CBFB (ENSG00000067955) #17	CES4A (ENSG00000172824)	CES3 (ENSG00000172828) #19	CES2 (ENSG00000172831) #20	CIAO2B (ENSG00000166595) #21	RRAD (ENSG00000166592) #22	CDH16 (ENSG00000166589) #23	PDP2 (ENSG00000172840) #24	CA7 (ENSG00000168748) #25	NAE1 (ENSG00000159593) #26	TERB1 (ENSG00000249961) #27	DYNC1LI2 (ENSG00000135720) #28	CMTM4 (ENSG00000183723) #29	CMTM3 (ENSG00000140931) #30	CMTM2 (ENSG00000140932) #31	CMTM1 (ENSG00000089505) #32	CKLF-CMTM1 (ENSG00000254788)	CKLF (ENSG00000217555) #33	TK2 (ENSG00000166548) #34	BEAN1 (ENSG00000166546) #36	CDH5 (ENSG00000179776) #37
Pan	ANCESTRAL SPECIES	19	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b.k #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200.o.a #19	ENSGT00940000153793.c #20	ENSGT00940000153793.d #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00530000063715.b.a.b
Bonobo	MODERN SPECIES	7	TMEM208 (ENSPPAG00000027348)	ENSPPAG00000040320	ELMO3 (ENSPPAG00000030509) #7	ENSPPAG00000009557 #8	EXOC3L1 (ENSPPAG00000027466) #9	MATCAP1 (ENSPPAG00000003682) #10	NOL3 (ENSPPAG00000040533) #11	HSF4 (ENSPPAG00000036811) #12	FBXL8 (ENSPPAG00000033828) #13	TRADD (ENSPPAG00000035660) #14	B3GNT9 (ENSPPAG00000001847) #15	PHAF1 (ENSPPAG00000038365) #16	ENSPPAG00000035018 #17	ENSPPAG00000039720 #20	CIAO2B (ENSPPAG00000024574) #21	ENSPPAG00000032214 #22	CDH16 (ENSPPAG00000043698) #23	PDP2 (ENSPPAG00000001912) #24	CA7 (ENSPPAG00000033884) #25	NAE1 (ENSPPAG00000041962) #26	TERB1 (ENSPPAG00000029434) #27	DYNC1LI2 (ENSPPAG00000041986) #28	CMTM4 (ENSPPAG00000031336) #29	CMTM3 (ENSPPAG00000038495) #30	CMTM2 (ENSPPAG00000019382) #31	CMTM1 (ENSPPAG00000027683) #32	TK2 (ENSPPAG00000036388) #34	BEAN1 (ENSPPAG00000023254) #36	CDH5 (ENSPPAG00000035788) #37	CDH11 (ENSPPAG00000022641)	ENSPPAG00000039625
Chimpanzee	MODERN SPECIES	7	ELMO3 (ENSPTRG00000008220) #7	E2F4 (ENSPTRG00000031180) #8	EXOC3L1 (ENSPTRG00000008218) #9	MATCAP1 (ENSPTRG00000031185) #10	NOL3 (ENSPTRG00000049746) #11	HSF4 (ENSPTRG00000034007) #12	FBXL8 (ENSPTRG00000008216) #13	TRADD (ENSPTRG00000008215) #14	B3GNT9 (ENSPTRG00000047547) #15	PHAF1 (ENSPTRG00000008214) #16	CBFB (ENSPTRG00000042433) #17	CES3 (ENSPTRG00000008210) #19	ENSPTRG00000008209 #20	CES2 (ENSPTRG00000051277) #20	CIAO2B (ENSPTRG00000008208) #21	RRAD (ENSPTRG00000008207) #22	CDH16 (ENSPTRG00000008205) #23	PDP2 (ENSPTRG00000047529) #24	CA7 (ENSPTRG00000008203) #25	NAE1 (ENSPTRG00000024077) #26	TERB1 (ENSPTRG00000008201) #27	DYNC1LI2 (ENSPTRG00000008200) #28	CMTM4 (ENSPTRG00000008199) #29	CMTM3 (ENSPTRG00000008198) #30	CMTM2 (ENSPTRG00000008197) #31	CMTM1 (ENSPTRG00000008195) #32	TK2 (ENSPTRG00000043774) #34	BEAN1 (ENSPTRG00000008192) #36	CDH5 (ENSPTRG00000008190) #37	CDH11 (ENSPTRG00000008189)	ENSPTRG00000048094
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005.o #34	ENSGT00390000003283 #36	ENSGT00390000012628.a.a.d	ENSGT00940000160587 #37
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005.o #34	ENSGT00390000003283 #36	ENSGT00390000012628.a.a.d	ENSGT00940000160587 #37
Cebidae_a	ANCESTRAL SPECIES	37	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005.o #34	ENSGT00390000003283 #36	ENSGT00390000012628.a.a.d	ENSGT00940000160587 #37
Bolivian squirrel monkey	MODERN SPECIES	125	ENSSBOG00000017407	ELMO3 (ENSSBOG00000020441) #7	E2F4 (ENSSBOG00000028854) #8	EXOC3L1 (ENSSBOG00000021491) #9	MATCAP1 (ENSSBOG00000022034) #10	ENSSBOG00000034224 #11	HSF4 (ENSSBOG00000032426) #12	FBXL8 (ENSSBOG00000027852) #13	TRADD (ENSSBOG00000030892) #14	PHAF1 (ENSSBOG00000029225) #16	CBFB (ENSSBOG00000033643) #17	CES4A (ENSSBOG00000026647)	CES3 (ENSSBOG00000034389) #19	CES2 (ENSSBOG00000023519) #20	ENSSBOG00000034849 #21	RRAD (ENSSBOG00000026924) #22	CDH16 (ENSSBOG00000000059) #23	PDP2 (ENSSBOG00000018774) #24	CA7 (ENSSBOG00000033052) #25	ENSSBOG00000021518 #26	ENSSBOG00000029039	TERB1 (ENSSBOG00000027076) #27	DYNC1LI2 (ENSSBOG00000033364) #28	CMTM4 (ENSSBOG00000019650) #29	CMTM3 (ENSSBOG00000005910) #30	CMTM2 (ENSSBOG00000029651) #31	CMTM1 (ENSSBOG00000024559) #32	CKLF (ENSSBOG00000029855) #33	TK2 (ENSSBOG00000030787) #34	ENSSBOG00000006658	BEAN1 (ENSSBOG00000027040) #36
Capuchin	MODERN SPECIES	118	ENSCCAG00000022766	ELMO3 (ENSCCAG00000027018) #7	E2F4 (ENSCCAG00000003067) #8	EXOC3L1 (ENSCCAG00000030759) #9	KIAA0895L (ENSCCAG00000028132) #10	NOL3 (ENSCCAG00000024743) #11	HSF4 (ENSCCAG00000018787) #12	FBXL8 (ENSCCAG00000032746) #13	TRADD (ENSCCAG00000025054) #14	ENSCCAG00000008806 #16	CBFB (ENSCCAG00000036199) #17	CES3 (ENSCCAG00000019551) #19	CES4A (ENSCCAG00000035376)	CES2 (ENSCCAG00000037058) #20	CIAO2B (ENSCCAG00000037204) #21	RRAD (ENSCCAG00000035598) #22	CDH16 (ENSCCAG00000028654) #23	PDP2 (ENSCCAG00000008632) #24	CA7 (ENSCCAG00000023221) #25	NAE1 (ENSCCAG00000035667) #26	TERB1 (ENSCCAG00000023835) #27	ENSCCAG00000024139 #28
Marmoset	MODERN SPECIES	12	ELMO3 (ENSCJAG00000016361) #7	E2F4 (ENSCJAG00000016403) #8	EXOC3L1 (ENSCJAG00000016422) #9	MATCAP1 (ENSCJAG00000039578) #10	ENSCJAG00000016465 #11	HSF4 (ENSCJAG00000016481) #12	FBXL8 (ENSCJAG00000016495) #13	TRADD (ENSCJAG00000016502) #14	B3GNT9 (ENSCJAG00000041278) #15	PHAF1 (ENSCJAG00000016510) #16	CBFB (ENSCJAG00000046152) #17	CES4A (ENSCJAG00000016544)	CES3 (ENSCJAG00000016564) #19	CES2 (ENSCJAG00000038169) #20	CIAO2B (ENSCJAG00000016595) #21	RRAD (ENSCJAG00000016611) #22	CDH16 (ENSCJAG00000016616) #23	PDP2 (ENSCJAG00000016637) #24	CA7 (ENSCJAG00000041008) #25	NAE1 (ENSCJAG00000016658) #26	TERB1 (ENSCJAG00000016748) #27	DYNC1LI2 (ENSCJAG00000016771) #28	CMTM3 (ENSCJAG00000043772) #30	CMTM2 (ENSCJAG00000016827) #31	CMTM1 (ENSCJAG00000016841) #32	CMTM4 (ENSCJAG00000016863) #29	BEAN1 (ENSCJAG00000016872) #36	CDH5 (ENSCJAG00000016885) #37	CDH11 (ENSCJAG00000016939)	CDH8 (ENSCJAG00000017003)	ENSCJAG00000086100
Mas night monkey	MODERN SPECIES	1135	ENSANAG00000034545	ELMO3 (ENSANAG00000034358) #7	ENSANAG00000032362 #8	EXOC3L1 (ENSANAG00000035083) #9	MATCAP1 (ENSANAG00000028721) #10	ENSANAG00000028129 #11	HSF4 (ENSANAG00000023015) #12	FBXL8 (ENSANAG00000005327) #13	TRADD (ENSANAG00000038062) #14	PHAF1 (ENSANAG00000037262) #16	CBFB (ENSANAG00000019257) #17	CES4A (ENSANAG00000037870)	CES3 (ENSANAG00000022725) #19	CES2 (ENSANAG00000038137) #20	CIAO2B (ENSANAG00000037535) #21	RRAD (ENSANAG00000030145) #22	CDH16 (ENSANAG00000030845) #23	PDP2 (ENSANAG00000019612) #24	CA7 (ENSANAG00000036081) #25	NAE1 (ENSANAG00000019420) #26	TERB1 (ENSANAG00000033396) #27	DYNC1LI2 (ENSANAG00000028336) #28	CMTM4 (ENSANAG00000035749) #29	CMTM3 (ENSANAG00000034718) #30	CMTM2 (ENSANAG00000032566) #31	CMTM1 (ENSANAG00000032547) #32	CKLF (ENSANAG00000022621) #33	ENSANAG00000021182 #34	ENSANAG00000024761	BEAN1 (ENSANAG00000031802) #36	CDH5 (ENSANAG00000026723) #37
Tarsier	MODERN SPECIES	2469												CES4A (ENSTSYG00000029314)	CES3 (ENSTSYG00000008191) #19	CES2 (ENSTSYG00000005004) #20	FAM96B (ENSTSYG00000005006) #21	RRAD (ENSTSYG00000030597) #22	CDH16 (ENSTSYG00000035577) #23	CA7 (ENSTSYG00000001353) #25	NAE1 (ENSTSYG00000013046) #26	TERB1 (ENSTSYG00000013044) #27	DYNC1LI2 (ENSTSYG00000012519) #28	CMTM4 (ENSTSYG00000001945) #29	CMTM3 (ENSTSYG00000030919) #30	CMTM2 (ENSTSYG00000036476) #31	ENSTSYG00000014769 #32	CKLF (ENSTSYG00000014768) #33	TK2 (ENSTSYG00000013251) #34	BEAN1 (ENSTSYG00000026309) #36	CDH5 (ENSTSYG00000009604) #37
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000153793 #20	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030.vb	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT00940000161047	ENSGT00940000160052	ENSGT00940000157672	ENSGT00940000162331	ENSGT00940000160211	ENSGT00940000161738	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Mouse lemur	MODERN SPECIES	12	CENPT (ENSMICG00000012233)	THAP11 (ENSMICG00000012247)	NUTF2 (ENSMICG00000028936)	EDC4 (ENSMICG00000012262)	NRN1L (ENSMICG00000041986)	ENSMICG00000012283	CTRL (ENSMICG00000045759)	PSMB10 (ENSMICG00000012294)	LCAT (ENSMICG00000048149)	SLC12A4 (ENSMICG00000012297)	DPEP3 (ENSMICG00000046654)	DPEP2 (ENSMICG00000012337)	ENSMICG00000012346	CES3 (ENSMICG00000013385) #19	CIAO2B (ENSMICG00000045692) #21	RRAD (ENSMICG00000045518) #22	CDH16 (ENSMICG00000013331) #23	CA7 (ENSMICG00000005822) #25	NAE1 (ENSMICG00000005795) #26	TERB1 (ENSMICG00000005788) #27	DYNC1LI2 (ENSMICG00000005769) #28	CMTM4 (ENSMICG00000005751) #29	ENSMICG00000005745 #30	ENSMICG00000032969	CMTM2 (ENSMICG00000005729) #31	ENSMICG00000047605 #32	CKLF (ENSMICG00000005693) #33	TK2 (ENSMICG00000005676) #34	BEAN1 (ENSMICG00000037496) #36	CDH5 (ENSMICG00000010353) #37	CDH11 (ENSMICG00000012944)
Lemuriformes_a	ANCESTRAL SPECIES	29	ENSGT00390000006585	ENSGT00510000047030.vb	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT00940000161047	ENSGT00940000160052	ENSGT00940000157672	ENSGT00940000162331	ENSGT00940000160211	ENSGT00740000117161	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Greater bamboo lemur	MODERN SPECIES	1185															CIAO2B (ENSPSMG00000013602) #21	RRAD (ENSPSMG00000013599) #22	CDH16 (ENSPSMG00000013526) #23	PDP2 (ENSPSMG00000013448) #24	CA7 (ENSPSMG00000013441) #25	NAE1 (ENSPSMG00000013391) #26	TERB1 (ENSPSMG00000013318) #27	DYNC1LI2 (ENSPSMG00000013298) #28	CMTM4 (ENSPSMG00000013267) #29	CMTM3 (ENSPSMG00000013255) #30
Coquerels sifaka	MODERN SPECIES	821	THAP11 (ENSPCOG00000011642)	ENSPCOG00000013505	EDC4 (ENSPCOG00000020076)	NRN1L (ENSPCOG00000028362)	PSKH1 (ENSPCOG00000015348)	CTRL (ENSPCOG00000023863)	PSMB10 (ENSPCOG00000022959)	LCAT (ENSPCOG00000027983)	SLC12A4 (ENSPCOG00000022292)	DPEP3 (ENSPCOG00000024767)	DPEP2 (ENSPCOG00000024713)	DPEP2NB (ENSPCOG00000020188)	CES3 (ENSPCOG00000019594) #19	CES2 (ENSPCOG00000025945) #20	CIAO2B (ENSPCOG00000017240) #21	RRAD (ENSPCOG00000028093) #22	CDH16 (ENSPCOG00000020556) #23	CA7 (ENSPCOG00000024500) #25	NAE1 (ENSPCOG00000022226) #26	TERB1 (ENSPCOG00000012520) #27	DYNC1LI2 (ENSPCOG00000014208) #28	CMTM4 (ENSPCOG00000024237) #29	CMTM3 (ENSPCOG00000015401) #30	CMTM2 (ENSPCOG00000028023) #31	ENSPCOG00000005668 #32	CKLF (ENSPCOG00000018638) #33	TK2 (ENSPCOG00000006992) #34	BEAN1 (ENSPCOG00000021489) #36	CDH5 (ENSPCOG00000021394) #37	CDH11 (ENSPCOG00000020984)	CDH8 (ENSPCOG00000028414)
Bushbaby	MODERN SPECIES	266	E2F4 (ENSOGAG00000000010) #8	EXOC3L1 (ENSOGAG00000000009) #9	MATCAP1 (ENSOGAG00000000008) #10	ENSOGAG00000033380 #11	HSF4 (ENSOGAG00000001391) #12	FBXL8 (ENSOGAG00000030725) #13	TRADD (ENSOGAG00000034457) #14	B3GNT9 (ENSOGAG00000024513) #15	PHAF1 (ENSOGAG00000004524) #16	CBFB (ENSOGAG00000004521) #17	ENSOGAG00000000337	CES4A (ENSOGAG00000004518)	CES2 (ENSOGAG00000006597) #20	CES3 (ENSOGAG00000004516) #19	CIAO2B (ENSOGAG00000024476) #21	RRAD (ENSOGAG00000014676) #22	CDH16 (ENSOGAG00000014668) #23	PDP2 (ENSOGAG00000028321) #24	CA7 (ENSOGAG00000014659) #25	NAE1 (ENSOGAG00000014645) #26	TERB1 (ENSOGAG00000013265) #27	DYNC1LI2 (ENSOGAG00000013256) #28	CMTM4 (ENSOGAG00000007148) #29	CMTM3 (ENSOGAG00000007144) #30	ENSOGAG00000009493 #31	CKLF (ENSOGAG00000009489) #33	TK2 (ENSOGAG00000009479) #34	BEAN1 (ENSOGAG00000009472) #36	CDH5 (ENSOGAG00000008653) #37	CDH11 (ENSOGAG00000001942)
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Glires	ANCESTRAL SPECIES	6	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00940000164375	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Myomorpha	ANCESTRAL SPECIES	22	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Muroidea	ANCESTRAL SPECIES	19	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793.h #20	ENSGT00940000164375	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00960000190850
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203 #32	ENSGT00390000005715.b #31	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00940000163203.b #32	ENSGT00390000005715.b #31	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200.m.b #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #31	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200.m.b #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.b.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.a.a #20	ENSGT00940000153793.h.c.a.a.a.a.b #20	ENSGT00940000153793.h.c.a.a.b #20	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #31	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200.m.b #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.b #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00390000017697.b.m #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715.a #31	ENSGT00940000163203.a #32	ENSGT00390000005715.b #31	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37
spretus	MODERN SPECIES	17	Hsf4 (MGP_SPRETEiJ_G0032587) #12	Fbxl8 (MGP_SPRETEiJ_G0032586) #13	Tradd (MGP_SPRETEiJ_G0032585) #14	B3gnt9 (MGP_SPRETEiJ_G0032584) #15	Phaf1 (MGP_SPRETEiJ_G0032583) #16	Cbfb (MGP_SPRETEiJ_G0032582) #17	Ces4a (MGP_SPRETEiJ_G0032581)	MGP_SPRETEiJ_G0032580 #19	MGP_SPRETEiJ_G0032579 #19	Ces2h (MGP_SPRETEiJ_G0032578)	Ces2g (MGP_SPRETEiJ_G0032577) #20	Ces2f (MGP_SPRETEiJ_G0032576) #20	Ces2e (MGP_SPRETEiJ_G0032575) #20	MGP_SPRETEiJ_G0032574 #20	Ciao2b (MGP_SPRETEiJ_G0032571) #21	Rrad (MGP_SPRETEiJ_G0032570) #22	Cdh16 (MGP_SPRETEiJ_G0032569) #23	Pdp2 (MGP_SPRETEiJ_G0032568) #24	Car7 (MGP_SPRETEiJ_G0032567) #25	Nae1 (MGP_SPRETEiJ_G0032566) #26	Terb1 (MGP_SPRETEiJ_G0032565) #27	Dync1li2 (MGP_SPRETEiJ_G0032564) #28	Cmtm4 (MGP_SPRETEiJ_G0032563) #29	Cmtm3 (MGP_SPRETEiJ_G0032562) #30	Cmtm2b (MGP_SPRETEiJ_G0032561) #31	MGP_SPRETEiJ_G0032560 #32	MGP_SPRETEiJ_G0032559 #31	Cklf (MGP_SPRETEiJ_G0032558) #33	Tk2 (MGP_SPRETEiJ_G0032557) #34	Bean1 (MGP_SPRETEiJ_G0032556) #36	Cdh5 (MGP_SPRETEiJ_G0032555) #37
Steppe mouse	MODERN SPECIES	2604														ENSMSIG00000023192 #20	Ciao2b (ENSMSIG00000023211) #21	Rrad (ENSMSIG00000023236) #22	Cdh16 (ENSMSIG00000023256) #23	Pdp2 (ENSMSIG00000023367) #24	ENSMSIG00000023374	Car7 (ENSMSIG00000023381) #25	Nae1 (ENSMSIG00000023417) #26	Terb1 (ENSMSIG00000023542) #27	Dync1li2 (ENSMSIG00000023574) #28	Cmtm4 (ENSMSIG00000023615) #29	Cmtm3 (ENSMSIG00000023616) #30	ENSMSIG00000023656 #33	ENSMSIG00000023670 #31	ENSMSIG00000023711 #33	Tk2 (ENSMSIG00000023721) #34	ENSMSIG00000023751 #36	Cdh5 (ENSMSIG00000023895) #37
Mouse	MODERN SPECIES	17	Tradd (ENSMUSG00000031887) #14	B3gnt9 (ENSMUSG00000069920) #15	Phaf1 (ENSMUSG00000031889) #16	Cbfb (ENSMUSG00000031885) #17	Ces4a (ENSMUSG00000060560)	Ces3b (ENSMUSG00000062181) #19	Ces3a (ENSMUSG00000069922) #19	Ces2h (ENSMUSG00000091813)	Ces2g (ENSMUSG00000031877) #20	Ces2f (ENSMUSG00000062826) #20	Ces2e (ENSMUSG00000031886) #20	Ces2c (ENSMUSG00000061825) #20	Ces2b (ENSMUSG00000050097) #20	Ces2a (ENSMUSG00000055730) #20	Ciao2b (ENSMUSG00000031879) #21	Rrad (ENSMUSG00000031880) #22	Cdh16 (ENSMUSG00000031881) #23	Pdp2 (ENSMUSG00000048371) #24	Car7 (ENSMUSG00000031883) #25	Nae1 (ENSMUSG00000031878) #26	Terb1 (ENSMUSG00000052616) #27	Dync1li2 (ENSMUSG00000035770) #28	Cmtm4 (ENSMUSG00000096188) #29	Cmtm3 (ENSMUSG00000031875) #30	Cmtm2b (ENSMUSG00000035785) #31	Cmtm1 (ENSMUSG00000110430) #32	Cmtm2a (ENSMUSG00000074127) #31	Cklf (ENSMUSG00000054400) #33	Tk2 (ENSMUSG00000035824) #34	Bean1 (ENSMUSG00000031872) #36	Cdh5 (ENSMUSG00000031871) #37
Ryukyu mouse	MODERN SPECIES	17	Hsf4 (MGP_CAROLIEiJ_G0031469) #12	Fbxl8 (MGP_CAROLIEiJ_G0031468) #13	Tradd (MGP_CAROLIEiJ_G0031467) #14	B3gnt9 (MGP_CAROLIEiJ_G0031466) #15	Phaf1 (MGP_CAROLIEiJ_G0031465) #16	Cbfb (MGP_CAROLIEiJ_G0031464) #17	Ces4a (MGP_CAROLIEiJ_G0031463)	MGP_CAROLIEiJ_G0031462 #19	Ces2h (MGP_CAROLIEiJ_G0031461)	MGP_CAROLIEiJ_G0031460 #20	Ces2g (MGP_CAROLIEiJ_G0031459) #20	Ces2f (MGP_CAROLIEiJ_G0031458) #20	Ces2e (MGP_CAROLIEiJ_G0031457) #20	Ces2c (MGP_CAROLIEiJ_G0031456) #20	Ciao2b (MGP_CAROLIEiJ_G0031454) #21	Rrad (MGP_CAROLIEiJ_G0031453) #22	Cdh16 (MGP_CAROLIEiJ_G0031452) #23	Pdp2 (MGP_CAROLIEiJ_G0031451) #24	Car7 (MGP_CAROLIEiJ_G0031450) #25	Nae1 (MGP_CAROLIEiJ_G0031449) #26	Terb1 (MGP_CAROLIEiJ_G0031448) #27	Dync1li2 (MGP_CAROLIEiJ_G0031447) #28	Cmtm4 (MGP_CAROLIEiJ_G0031446) #29	Cmtm3 (MGP_CAROLIEiJ_G0031445) #30	Cmtm2b (MGP_CAROLIEiJ_G0031444) #31	MGP_CAROLIEiJ_G0031443 #32	MGP_CAROLIEiJ_G0031442 #31	Cklf (MGP_CAROLIEiJ_G0031441) #33	Tk2 (MGP_CAROLIEiJ_G0031440) #34	MGP_CAROLIEiJ_G0031439 #36	Cdh5 (MGP_CAROLIEiJ_G0031438) #37
Shrew mouse	MODERN SPECIES	12	Tradd (MGP_PahariEiJ_G0023067) #14	B3gnt9 (MGP_PahariEiJ_G0023066) #15	Phaf1 (MGP_PahariEiJ_G0023065) #16	Cbfb (MGP_PahariEiJ_G0023064) #17	Ces4a (MGP_PahariEiJ_G0023063)	MGP_PahariEiJ_G0023062 #19	MGP_PahariEiJ_G0023061 #19	Ces2h (MGP_PahariEiJ_G0023060)	Ces2g (MGP_PahariEiJ_G0023059) #20	Ces2f (MGP_PahariEiJ_G0023058) #20	Ces2e (MGP_PahariEiJ_G0023057) #20	MGP_PahariEiJ_G0023056 #20	MGP_PahariEiJ_G0023054 #20	MGP_PahariEiJ_G0023055 #20	Ciao2b (MGP_PahariEiJ_G0023052) #21	Rrad (MGP_PahariEiJ_G0023051) #22	Cdh16 (MGP_PahariEiJ_G0023050) #23	Pdp2 (MGP_PahariEiJ_G0023049) #24	Car7 (MGP_PahariEiJ_G0023048) #25	MGP_PahariEiJ_G0023047 #26	Terb1 (MGP_PahariEiJ_G0023046) #27	Dync1li2 (MGP_PahariEiJ_G0023045) #28	Cmtm4 (MGP_PahariEiJ_G0023044) #29	Cmtm3 (MGP_PahariEiJ_G0023043) #30	Cmtm2b (MGP_PahariEiJ_G0023042) #31	MGP_PahariEiJ_G0023041 #32	MGP_PahariEiJ_G0023040 #32	Cmtm2a (MGP_PahariEiJ_G0023039) #31	MGP_PahariEiJ_G0023038 #33	Tk2 (MGP_PahariEiJ_G0023037) #34	Bean1 (MGP_PahariEiJ_G0023036) #36
Rat	MODERN SPECIES	10						LOC100910259 (ENSRNOG00000069933) #20	LOC679368 (ENSRNOG00000048823) #20	Ces2g (ENSRNOG00000013808) #20	LOC679149 (ENSRNOG00000048039) #20	Ces2c-ps2 (ENSRNOG00000052151) #20	Ces2a (ENSRNOG00000011330) #20	Ces2e (ENSRNOG00000011635) #20	AABR07043429.1 (ENSRNOG00000049890)	Ces2j (ENSRNOG00000029744) #20	Ciao2b (ENSRNOG00000011865) #21	Rrad (ENSRNOG00000011901) #22	Cdh16 (ENSRNOG00000012222) #23	Pdp2 (ENSRNOG00000012343) #24	Car7 (ENSRNOG00000012371) #25	Nae1 (ENSRNOG00000033133) #26	Terb1 (ENSRNOG00000055097) #27	Dync1li2 (ENSRNOG00000025791) #28	Cmtm4 (ENSRNOG00000011009) #29	Cmtm3 (ENSRNOG00000010691) #30	LOC102554842 (ENSRNOG00000057998) #31	Cmtm1 (ENSRNOG00000057711) #32	ENSRNOG00000071201	Cmtm2a (ENSRNOG00000025420) #31	Cklf (ENSRNOG00000012752) #33	Tk2 (ENSRNOG00000012853) #34	Bean1 (ENSRNOG00000066314) #36
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.b.a.a #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00960000190850
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.b.a.a.a #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00940000153793.g #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Chinese hamster chok1gshd	MODERN SPECIES	112	ENSCGRG00001009474	ENSCGRG00001019809 #20	Ces2h (ENSCGRG00001009506)	ENSCGRG00001011776 #20	Ces2f (ENSCGRG00001020935) #20	Ces2e (ENSCGRG00001025032) #20	ENSCGRG00001024666 #20	ENSCGRG00001009450 #20	ENSCGRG00001009635 #20	ENSCGRG00001012927 #20	ENSCGRG00001023717 #20	ENSCGRG00001025021 #20	ENSCGRG00001022881 #20	ENSCGRG00001019835 #20	Ciao2b (ENSCGRG00001021991) #21	Rrad (ENSCGRG00001019311) #22	Cdh16 (ENSCGRG00001014582) #23	Pdp2 (ENSCGRG00001004299) #24	Car7 (ENSCGRG00001007396) #25	Nae1 (ENSCGRG00001024810) #26	Terb1 (ENSCGRG00001020854) #27	Dync1li2 (ENSCGRG00001024490) #28	Cmtm4 (ENSCGRG00001022900) #29	Cmtm3 (ENSCGRG00001009064) #30	ENSCGRG00001003108 #31	ENSCGRG00001018415 #32	Cklf (ENSCGRG00001011441) #33	Tk2 (ENSCGRG00001016771) #34	Bean1 (ENSCGRG00001019666) #36	Cdh5 (ENSCGRG00001016243) #37	Cdh11 (ENSCGRG00001019799)
Golden Hamster	MODERN SPECIES	701														ENSMAUG00000018660 #20	Ciao2b (ENSMAUG00000008806) #21	Rrad (ENSMAUG00000007171) #22	Cdh16 (ENSMAUG00000000808) #23	Pdp2 (ENSMAUG00000013617) #24	Car7 (ENSMAUG00000012285) #25	Nae1 (ENSMAUG00000013882) #26	Terb1 (ENSMAUG00000010324) #27	Dync1li2 (ENSMAUG00000011837) #28	Cmtm4 (ENSMAUG00000011070) #29	Cmtm3 (ENSMAUG00000010935) #30	ENSMAUG00000010482 #31	Cklf (ENSMAUG00000019904) #33	Tk2 (ENSMAUG00000014656) #34	Bean1 (ENSMAUG00000018813) #36	Cdh5 (ENSMAUG00000016489) #37	Cdh11 (ENSMAUG00000015471)	ENSMAUG00000017111
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.h.c.a.b.b #20	ENSGT00940000153793.h.c.a.b.a #20	ENSGT00940000153793.h.c.a.a.a.c.a #20	ENSGT00940000153793.h.c.a.a.a.d #20	ENSGT00940000153793.h.c.a.a.b.a.b #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00960000190850
Prairie vole	MODERN SPECIES	12	Exoc3l (ENSMOCG00000017278) #9	Matcap1 (ENSMOCG00000020057) #10	Nol3 (ENSMOCG00000013389) #11	Hsf4 (ENSMOCG00000017670) #12	Fbxl8 (ENSMOCG00000005462) #13	Tradd (ENSMOCG00000014235) #14	B3gnt9 (ENSMOCG00000008518) #15	Phaf1 (ENSMOCG00000008111) #16	Cbfb (ENSMOCG00000013533) #17	Ces4a (ENSMOCG00000021744)	ENSMOCG00000018149 #19	Ces2h (ENSMOCG00000001262)	ENSMOCG00000002668 #20	Ces2a (ENSMOCG00000003082) #20	Ciao2b (ENSMOCG00000006278) #21	Rrad (ENSMOCG00000013549) #22	Cdh16 (ENSMOCG00000016245) #23	Pdp2 (ENSMOCG00000017089) #24	Car7 (ENSMOCG00000018579) #25	Nae1 (ENSMOCG00000015303) #26	Terb1 (ENSMOCG00000002618) #27	Dync1li2 (ENSMOCG00000012762) #28	Cmtm4 (ENSMOCG00000020651) #29	Cmtm3 (ENSMOCG00000004281) #30	ENSMOCG00000022522 #31	Cklf (ENSMOCG00000018064) #33	Tk2 (ENSMOCG00000010580) #34	Bean1 (ENSMOCG00000013884) #36	Cdh5 (ENSMOCG00000011293) #37	Cdh11 (ENSMOCG00000012927)	Cdh8 (ENSMOCG00000018034)
Northern American deer mouse	MODERN SPECIES	18											ENSPEMG00000011212	ENSPEMG00000029309 #20	ENSPEMG00000016151 #20	ENSPEMG00000028589 #20	Ciao2b (ENSPEMG00000015548) #21	Rrad (ENSPEMG00000015328) #22	Cdh16 (ENSPEMG00000012028) #23	Pdp2 (ENSPEMG00000026870) #24	Car7 (ENSPEMG00000009187) #25	Nae1 (ENSPEMG00000004946) #26	Terb1 (ENSPEMG00000019123) #27	Dync1li2 (ENSPEMG00000005990) #28	Cmtm4 (ENSPEMG00000025674) #29	Cmtm3 (ENSPEMG00000002082) #30	ENSPEMG00000001497 #31	ENSPEMG00000026503 #32	Cklf (ENSPEMG00000000227) #33	Tk2 (ENSPEMG00000018292) #34	ENSPEMG00000017019 #36	Cdh5 (ENSPEMG00000014964) #37	ENSPEMG00000025771
Upper Galilee mountains blind mole rat	MODERN SPECIES	1323														ENSNGAG00000013675 #20	Ciao2b (ENSNGAG00000021344) #21	Rrad (ENSNGAG00000021455) #22	ENSNGAG00000003032 #23	ENSNGAG00000008908 #23	ENSNGAG00000014934 #24	Car7 (ENSNGAG00000015718) #25	Nae1 (ENSNGAG00000019672) #26	Terb1 (ENSNGAG00000008412) #27	Dync1li2 (ENSNGAG00000010836) #28	Cmtm4 (ENSNGAG00000016953) #29	Cmtm3 (ENSNGAG00000019696) #30
Lesser Egyptian jerboa	MODERN SPECIES	102											Ces4a (ENSJJAG00000022084)	ENSJJAG00000012198 #20	ENSJJAG00000020315 #20	ENSJJAG00000007124 #20	Ciao2b (ENSJJAG00000018405) #21	Rrad (ENSJJAG00000022190) #22	Cdh16 (ENSJJAG00000017353) #23	Pdp2 (ENSJJAG00000014880) #24	Car7 (ENSJJAG00000011532) #25	Nae1 (ENSJJAG00000020610) #26	ENSJJAG00000013872	Terb1 (ENSJJAG00000021091) #27	ENSJJAG00000004119	Dync1li2 (ENSJJAG00000014752) #28	Cmtm4 (ENSJJAG00000019660) #29	Cmtm3 (ENSJJAG00000020505) #30	ENSJJAG00000014677	ENSJJAG00000000150	Tk2 (ENSJJAG00000010805) #34	Bean1 (ENSJJAG00000011889) #36	Cdh5 (ENSJJAG00000018476) #37
Kangaroo rat	MODERN SPECIES	337	Tmem208 (ENSDORG00000013263)	Fbxl9 (ENSDORG00000015136)	Elmo3 (ENSDORG00000015132) #7	ENSDORG00000015131 #8	Exoc3l (ENSDORG00000015130) #9	Matcap1 (ENSDORG00000015129) #10	Nol3 (ENSDORG00000026944) #11	Hsf4 (ENSDORG00000015128) #12	Fbxl8 (ENSDORG00000015127) #13	Tradd (ENSDORG00000015126) #14	B3gnt9 (ENSDORG00000030078) #15	Phaf1 (ENSDORG00000015125) #16	Cbfb (ENSDORG00000029036) #17	ENSDORG00000029390	ENSDORG00000013543 #21	Rrad (ENSDORG00000013540) #22	Pdp2 (ENSDORG00000024268) #24	Car7 (ENSDORG00000013532) #25	Nae1 (ENSDORG00000013530) #26	Dync1li2 (ENSDORG00000010219) #28	Cmtm3 (ENSDORG00000008429) #30	Tk2 (ENSDORG00000015017) #34	Bean1 (ENSDORG00000015016) #36	Cdh11 (ENSDORG00000002619)	Cdh8 (ENSDORG00000008036)	ENSDORG00000023898	ENSDORG00000026429	Got2 (ENSDORG00000015354)	Slc38a7 (ENSDORG00000015353)	ENSDORG00000029061	ENSDORG00000002101
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Sciuridae	ANCESTRAL SPECIES	5	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375	ENSGT00940000153793.k #20	ENSGT00940000153793.l #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00980000202834	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375.a	ENSGT00940000153793.k.a.a.a.b #20	ENSGT00940000153793.k.a.a.b.a #20	ENSGT00940000153793.l #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000164375.a	ENSGT00940000153793.k.a.a.a.b #20	ENSGT00940000153793.k.a.a.b.a #20	ENSGT00940000153793.k.a.a.a.a.a.a #20	ENSGT00940000153793.k.a.a.a.a.a.b #20	ENSGT00940000164375.b	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Arctic ground squirrel	MODERN SPECIES	105															CIAO2B (ENSUPAG00010021302) #21	RRAD (ENSUPAG00010021305) #22	CDH16 (ENSUPAG00010021315) #23	PDP2 (ENSUPAG00010021334) #24	CA7 (ENSUPAG00010021336) #25	NAE1 (ENSUPAG00010021346) #26	TERB1 (ENSUPAG00010021363) #27	DYNC1LI2 (ENSUPAG00010021388) #28	CMTM4 (ENSUPAG00010021404) #29	CMTM3 (ENSUPAG00010021411) #30	ENSUPAG00010021429 #32	CKLF (ENSUPAG00010021432) #33	TK2 (ENSUPAG00010021435) #34	ENSUPAG00010021443	BEAN1 (ENSUPAG00010021449) #36	CDH5 (ENSUPAG00010021462) #37	CDH11 (ENSUPAG00010021471)
Squirrel	MODERN SPECIES	75	TRADD (ENSSTOG00000011360) #14	B3GNT9 (ENSSTOG00000028759) #15	PHAF1 (ENSSTOG00000011346) #16	CBFB (ENSSTOG00000011344) #17	CES4A (ENSSTOG00000011337)	CES3 (ENSSTOG00000012032) #19	ENSSTOG00000025164	ENSSTOG00000026289 #20	ENSSTOG00000027386 #20	ENSSTOG00000022937 #20	ENSSTOG00000025757 #20	ENSSTOG00000024931 #20	ENSSTOG00000019872 #20	ENSSTOG00000028587	CIAO2B (ENSSTOG00000007870) #21	RRAD (ENSSTOG00000007859) #22	ENSSTOG00000007823 #23	ENSSTOG00000031778	ENSSTOG00000029943 #23	PDP2 (ENSSTOG00000007817) #24	CA7 (ENSSTOG00000021436) #25	NAE1 (ENSSTOG00000029230) #26	TERB1 (ENSSTOG00000007763) #27	DYNC1LI2 (ENSSTOG00000007750) #28	CMTM4 (ENSSTOG00000007736) #29	CMTM3 (ENSSTOG00000026680) #30	CKLF (ENSSTOG00000007682) #33	TK2 (ENSSTOG00000029024) #34	BEAN1 (ENSSTOG00000027189) #36	CDH5 (ENSSTOG00000006256) #37	CDH11 (ENSSTOG00000011815)
Eurasian red squirrel	MODERN SPECIES	8	MATCAP1 (ENSSVLG00005024362) #10	ENSSVLG00005024414 #11	HSF4 (ENSSVLG00005024450) #12	FBXL8 (ENSSVLG00005024480) #13	TRADD (ENSSVLG00005024499) #14	B3GNT9 (ENSSVLG00005024534) #15	PHAF1 (ENSSVLG00005024553) #16	CBFB (ENSSVLG00005024570) #17	ENSSVLG00005024618	CES4A (ENSSVLG00005024667)	CES3 (ENSSVLG00005024805) #19	ENSSVLG00005025098	ENSSVLG00005025347 #20	ENSSVLG00005025467 #20	CIAO2B (ENSSVLG00005025484) #21	RRAD (ENSSVLG00005025495) #22	CDH16 (ENSSVLG00005025529) #23	PDP2 (ENSSVLG00005025571) #24	CA7 (ENSSVLG00005025581) #25	NAE1 (ENSSVLG00005025610) #26	TERB1 (ENSSVLG00005025637) #27	DYNC1LI2 (ENSSVLG00005025665) #28	CMTM4 (ENSSVLG00005025679) #29	CMTM3 (ENSSVLG00005025691) #30	ENSSVLG00005025706 #32	CKLF (ENSSVLG00005025721) #33	TK2 (ENSSVLG00005025748) #34	BEAN1 (ENSSVLG00005016934) #36	ENSSVLG00005016998	CDH5 (ENSSVLG00005017067) #37	CDH11 (ENSSVLG00005017448)
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793.j.a #20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793.j.a #20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132.j #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00940000153793.j.a #20	ENSGT00940000164375	ENSGT00940000153793.i.b.c #20	ENSGT00940000153793.i.a #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a
Long-tailed chinchilla	MODERN SPECIES	140													ENSCLAG00000006303 #21	ENSCLAG00000005701 #21	ENSCLAG00000005375 #21	RRAD (ENSCLAG00000005281) #22	CDH16 (ENSCLAG00000009522) #23	PDP2 (ENSCLAG00000010280) #24	CA7 (ENSCLAG00000009866) #25	NAE1 (ENSCLAG00000008427) #26	TERB1 (ENSCLAG00000007580) #27	DYNC1LI2 (ENSCLAG00000006461) #28	CMTM4 (ENSCLAG00000006181) #29	CMTM3 (ENSCLAG00000005520) #30	ENSCLAG00000005405	CKLF (ENSCLAG00000008088) #33	TK2 (ENSCLAG00000008240) #34	BEAN1 (ENSCLAG00000008190) #36	CDH5 (ENSCLAG00000012589) #37	CDH11 (ENSCLAG00000016732)	CDH8 (ENSCLAG00000007676)
Degu	MODERN SPECIES	52	FBXL8 (ENSODEG00000016675) #13	TRADD (ENSODEG00000016273) #14	B3GNT9 (ENSODEG00000015783) #15	PHAF1 (ENSODEG00000015277) #16	CBFB (ENSODEG00000016515) #17	CES4A (ENSODEG00000015763)	CES3 (ENSODEG00000016302) #19	ENSODEG00000015656 #20	ENSODEG00000016121	ENSODEG00000017576 #20	ENSODEG00000015554 #20	ENSODEG00000016915 #20	ENSODEG00000016345	ENSODEG00000016240 #20	ENSODEG00000015617 #21	RRAD (ENSODEG00000015827) #22	CDH16 (ENSODEG00000016010) #23	PDP2 (ENSODEG00000020328) #24	CA7 (ENSODEG00000015891) #25	ENSODEG00000016176 #26	TERB1 (ENSODEG00000017438) #27	ENSODEG00000016281 #28	CMTM4 (ENSODEG00000015905) #29	CMTM3 (ENSODEG00000016359) #30	CKLF (ENSODEG00000016474) #33	TK2 (ENSODEG00000016329) #34	BEAN1 (ENSODEG00000016084) #36	CDH5 (ENSODEG00000015848) #37	CDH11 (ENSODEG00000016523)	ENSODEG00000016848	ENSODEG00000016592
Guinea pig	MODERN SPECIES	22	ENSCPOG00000004946 #11	HSF4 (ENSCPOG00000010834) #12	FBXL8 (ENSCPOG00000010832) #13	TRADD (ENSCPOG00000010831) #14	B3GNT9 (ENSCPOG00000026402) #15	PHAF1 (ENSCPOG00000010828) #16	ENSCPOG00000010825 #17	CES4A (ENSCPOG00000005603)	CES3 (ENSCPOG00000033893) #19	ENSCPOG00000039038 #20	ENSCPOG00000034227	ENSCPOG00000005610 #20	ENSCPOG00000034407 #20	ENSCPOG00000034731 #20	CIAO2B (ENSCPOG00000007431) #21	RRAD (ENSCPOG00000025211) #22	CDH16 (ENSCPOG00000021245) #23	PDP2 (ENSCPOG00000009661) #24	ENSCPOG00000033546	CA7 (ENSCPOG00000024957) #25	NAE1 (ENSCPOG00000020116) #26	TERB1 (ENSCPOG00000015414) #27	DYNC1LI2 (ENSCPOG00000015409) #28	CMTM4 (ENSCPOG00000015406) #29	ENSCPOG00000015404 #30	CKLF (ENSCPOG00000040504) #33	TK2 (ENSCPOG00000006736) #34	BEAN1 (ENSCPOG00000036515) #36	CDH5 (ENSCPOG00000037748) #37	ENSCPOG00000040767	ENSCPOG00000036927
Naked mole-rat female	MODERN SPECIES	26	CENPN (ENSHGLG00000050859)	ATMIN (ENSHGLG00000014861)	C16orf46 (ENSHGLG00000034703)	GCSH (ENSHGLG00000044660)	ENSHGLG00000038072	BCO1 (ENSHGLG00000017639)	GAN (ENSHGLG00000018670)	CMIP (ENSHGLG00000009888)	PLCG2 (ENSHGLG00000014242)	SDR42E1 (ENSHGLG00000010816)	ENSHGLG00000038316	MPHOSPH6 (ENSHGLG00000019140)	ENSHGLG00000045793	ENSHGLG00000018583 #20	CIAO2B (ENSHGLG00000043672) #21	RRAD (ENSHGLG00000016885) #22	CDH16 (ENSHGLG00000019376) #23	PDP2 (ENSHGLG00000039814) #24	CA7 (ENSHGLG00000016917) #25	NAE1 (ENSHGLG00000018813) #26	TERB1 (ENSHGLG00000019160) #27	ENSHGLG00000017579 #28	CMTM4 (ENSHGLG00000010963) #29	CMTM3 (ENSHGLG00000011197) #30	ENSHGLG00000012002 #33	TK2 (ENSHGLG00000032022) #34	ENSHGLG00000045630	BEAN1 (ENSHGLG00000045590) #36	ENSHGLG00000013876 #37	ENSHGLG00000017123	ENSHGLG00000017133
Lagomorpha	ANCESTRAL SPECIES	48															ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000160432 #30	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00960000186694	ENSGT00950000183082.a	ENSGT00940000158136
Pika	MODERN SPECIES	4891															ENSOPRG00000013479 #21	ENSOPRG00000013468 #22
Rabbit	MODERN SPECIES	16	ENSOCUG00000033074 #17	CES4A (ENSOCUG00000005162)	CES3 (ENSOCUG00000005152) #19	ENSOCUG00000034887 #20	ENSOCUG00000017453 #20	ENSOCUG00000024128 #20	ENSOCUG00000025241 #20	ENSOCUG00000025273 #20	ENSOCUG00000023708 #20	ENSOCUG00000000591 #20	ENSOCUG00000012804 #20	ENSOCUG00000024499 #20	ENSOCUG00000024631	ENSOCUG00000025164 #20	ENSOCUG00000000588 #21	RRAD (ENSOCUG00000000585) #22	PDP2 (ENSOCUG00000000578) #24	CA7 (ENSOCUG00000027920) #25	NAE1 (ENSOCUG00000000573) #26	TERB1 (ENSOCUG00000000569) #27	DYNC1LI2 (ENSOCUG00000006143) #28	CMTM3 (ENSOCUG00000027757) #30	ENSOCUG00000026523 #32	CKLF (ENSOCUG00000038857) #33	ENSOCUG00000014873 #34	ENSOCUG00000021527 #36	ENSOCUG00000039132	CDH5 (ENSOCUG00000010192) #37	CDH11 (ENSOCUG00000017019)	ENSOCUG00000013269	ENSOCUG00000022105
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Xenarthra	ANCESTRAL SPECIES	31	ENSGT00940000160212	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00940000158063 #12	ENSGT00390000002016 #14	ENSGT00940000153528.a.b.a.a #16	ENSGT00940000162243 #15	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00390000003283 #36	ENSGT00940000160587 #37
Armadillo	MODERN SPECIES	1766	FHOD1 (ENSDNOG00000019344)	TMEM208 (ENSDNOG00000044413)	ENSDNOG00000044213	ELMO3 (ENSDNOG00000002885) #7	E2F4 (ENSDNOG00000041139) #8	EXOC3L1 (ENSDNOG00000033619) #9	MATCAP1 (ENSDNOG00000038114) #10	HSF4 (ENSDNOG00000032363) #12	TRADD (ENSDNOG00000043193) #14	PHAF1 (ENSDNOG00000032949) #16	B3GNT9 (ENSDNOG00000036814) #15	CBFB (ENSDNOG00000045626) #17	CES3 (ENSDNOG00000016221) #19	CES2 (ENSDNOG00000036173) #20	CIAO2B (ENSDNOG00000019604) #21	RRAD (ENSDNOG00000004763) #22	CDH16 (ENSDNOG00000040290) #23	PDP2 (ENSDNOG00000001626) #24	CA7 (ENSDNOG00000019175) #25	NAE1 (ENSDNOG00000019167) #26	ENSDNOG00000032686 #27	DYNC1LI2 (ENSDNOG00000013569) #28	CMTM3 (ENSDNOG00000041125) #30	ENSDNOG00000034923 #32	CKLF (ENSDNOG00000001485) #33	TK2 (ENSDNOG00000039626) #34	ENSDNOG00000045276 #35	BEAN1 (ENSDNOG00000001474) #36	CDH5 (ENSDNOG00000046197) #37
Afrotheria	ANCESTRAL SPECIES	48	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Afrotheria_a	ANCESTRAL SPECIES	47	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000155200 #19	ENSGT00940000153793 #20	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00390000005715 #31	ENSGT00940000163203 #32	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00390000003283 #36	ENSGT00940000160587 #37	ENSGT00940000153691.a.a
Elephant	MODERN SPECIES	419	ENSLAFG00000006309	ELMO3 (ENSLAFG00000006304) #7	E2F4 (ENSLAFG00000026216) #8	EXOC3L1 (ENSLAFG00000032050) #9	MATCAP1 (ENSLAFG00000027287) #10	ENSLAFG00000025992 #11	HSF4 (ENSLAFG00000021984) #12	FBXL8 (ENSLAFG00000022599) #13	TRADD (ENSLAFG00000006288) #14	B3GNT9 (ENSLAFG00000027277) #15	PHAF1 (ENSLAFG00000006284) #16	ENSLAFG00000005502 #17	CES3 (ENSLAFG00000001736) #19	CES2 (ENSLAFG00000007540) #20	CIAO2B (ENSLAFG00000025861) #21	RRAD (ENSLAFG00000001836) #22	CDH16 (ENSLAFG00000001834) #23	PDP2 (ENSLAFG00000001832) #24	CA7 (ENSLAFG00000000263) #25	NAE1 (ENSLAFG00000022057) #26	TERB1 (ENSLAFG00000009064) #27	DYNC1LI2 (ENSLAFG00000009061) #28	CMTM4 (ENSLAFG00000028933) #29	CMTM3 (ENSLAFG00000022150) #30	ENSLAFG00000009638 #31	CKLF (ENSLAFG00000009630) #33	TK2 (ENSLAFG00000009627) #34	BEAN1 (ENSLAFG00000009624) #36	CDH5 (ENSLAFG00000006861) #37	CDH11 (ENSLAFG00000013684)	CDH8 (ENSLAFG00000013363)
Hyrax	MODERN SPECIES	5606																RRAD (ENSPCAG00000013918) #22	CDH16 (ENSPCAG00000013809) #23
Tenrec	MODERN SPECIES	16475																RRAD (ENSETEG00000005272) #22
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000160637	ENSGT00940000159455 #7	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200 #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.h #19	ENSGT00940000155200.g.a #19	ENSGT00940000155200.g.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000156252 #8	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.h #19	ENSGT00940000155200.g.a #19	ENSGT00940000155200.g.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT01030000234613.a.b #9	ENSGT00390000004417.b #10	ENSGT00510000049353 #11	ENSGT00940000158063 #12	ENSGT00420000029943 #13	ENSGT00390000002016 #14	ENSGT00940000162243 #15	ENSGT00940000153528.a.b.a.a #16	ENSGT00390000018132 #17	ENSGT00940000162924	ENSGT00940000155200.h #19	ENSGT00940000155200.g.a.a #19	ENSGT00940000155200.g.b #19	ENSGT00940000155200.g.a.b.a #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000161650 #23	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1088												ENSVURG00010010830 #19	ENSVURG00010010756 #19	ENSVURG00010010618 #19	ENSVURG00010010567 #21	ENSVURG00010010554 #22	ENSVURG00010010452 #23	ENSVURG00010010430 #24	ENSVURG00010010414 #25	ENSVURG00010010390 #26	ENSVURG00010010375 #27	ENSVURG00010010310 #28	ENSVURG00010010297 #29	ENSVURG00010010293 #30	ENSVURG00010010279 #34	ENSVURG00010010272 #35	ENSVURG00010010266	ENSVURG00010010259	ENSVURG00010010237 #37	ENSVURG00010010215	ENSVURG00010010201
Common wonbat	MODERN SPECIES	1088	ENSVURG00010010144	ENSVURG00010010132	ENSVURG00010010125	ENSVURG00010010114	ENSVURG00010010107	ENSVURG00010010104	ENSVURG00010010098	ENSVURG00010010084	ENSVURG00010010091	ENSVURG00010010071	ENSVURG00010010057	ENSVURG00010009919 #19	ENSVURG00010009851 #19	ENSVURG00010009788 #19	ENSVURG00010009763 #21	ENSVURG00010009756 #22	ENSVURG00010009656 #23	ENSVURG00010009641 #24	ENSVURG00010009632 #25	ENSVURG00010009598 #26	ENSVURG00010009580 #27	ENSVURG00010009560 #28	ENSVURG00010009544 #29	ENSVURG00010009540 #30	ENSVURG00010009530 #34	ENSVURG00010009524 #35	ENSVURG00010009517	ENSVURG00010009512	ENSVURG00010009505 #37	ENSVURG00010009493
koala	MODERN SPECIES	34	B3GNT9 (ENSPCIG00000017528) #15	PHAF1 (ENSPCIG00000017527) #16	CBFB (ENSPCIG00000017526) #17	ENSPCIG00000017525	ENSPCIG00000017523 #19	ENSPCIG00000015988 #19	ENSPCIG00000037319 #19	ENSPCIG00000036489 #19	ENSPCIG00000017521 #19	ENSPCIG00000017520 #19	ENSPCIG00000004078 #19	ENSPCIG00000017519 #19	ENSPCIG00000017515 #19	ENSPCIG00000037139 #19	CIAO2B (ENSPCIG00000017514) #21	RRAD (ENSPCIG00000017512) #22	CDH16 (ENSPCIG00000017511) #23	PDP2 (ENSPCIG00000027144) #24	CA7 (ENSPCIG00000027145) #25	NAE1 (ENSPCIG00000027148) #26	TERB1 (ENSPCIG00000027153) #27	DYNC1LI2 (ENSPCIG00000027159) #28	CMTM4 (ENSPCIG00000027160) #29	CMTM3 (ENSPCIG00000027166) #30	ENSPCIG00000027173 #33	ENSPCIG00000034939 #34	ENSPCIG00000027180 #34	ENSPCIG00000027185 #35	ENSPCIG00000027186	ENSPCIG00000036452	CDH5 (ENSPCIG00000030414) #37
Wallaby	MODERN SPECIES	7397																RRAD (ENSMEUG00000010870) #22
Tasmanian devil	MODERN SPECIES	1	E2F4 (ENSSHAG00000011293) #8	EXOC3L1 (ENSSHAG00000011228) #9	MATCAP1 (ENSSHAG00000026018) #10	ENSSHAG00000010997 #11	ENSSHAG00000010769 #12	PHAF1 (ENSSHAG00000027333) #16	B3GNT9 (ENSSHAG00000023665) #15	ENSSHAG00000026641 #17	ENSSHAG00000009427	CES3 (ENSSHAG00000030468) #19	ENSSHAG00000022801 #19	ENSSHAG00000007978 #19	ENSSHAG00000006251 #19	ENSSHAG00000007562 #19	CIAO2B (ENSSHAG00000021172) #21	RRAD (ENSSHAG00000027207) #22	CDH16 (ENSSHAG00000002695) #23	PDP2 (ENSSHAG00000024705) #24	CA7 (ENSSHAG00000003237) #25	NAE1 (ENSSHAG00000004152) #26	TERB1 (ENSSHAG00000005275) #27	DYNC1LI2 (ENSSHAG00000004049) #28	CMTM4 (ENSSHAG00000029798) #29	CMTM3 (ENSSHAG00000001091) #30	ENSSHAG00000029822 #33	TK2 (ENSSHAG00000024474) #34	ENSSHAG00000030579 #35	ENSSHAG00000025736	CDH5 (ENSSHAG00000032217) #37	CDH11 (ENSSHAG00000009249)	ENSSHAG00000017154
Platypus	MODERN SPECIES	83	DOT1L (ENSOANG00000010015)	ENSOANG00000036300	OAZ1 (ENSOANG00000000654)	ENSOANG00000030064	LINGO3 (ENSOANG00000003705)	SEMA3G (ENSOANG00000013236)	SYN2 (ENSOANG00000020050)	PPARG (ENSOANG00000046286)	ISY1 (ENSOANG00000013141)	ENSOANG00000045625	RAF1 (ENSOANG00000005684)	MKRN2 (ENSOANG00000038817)	MKRN2OS (ENSOANG00000039177)	ENSOANG00000011648	CIAO2B (ENSOANG00000045690) #21	RRAD (ENSOANG00000013935) #22	ENSOANG00000042386	PDP2 (ENSOANG00000015274) #24	CA7 (ENSOANG00000012209) #25	ENSOANG00000031931 #27	ENSOANG00000029079 #27	ENSOANG00000030783 #27	ENSOANG00000032301 #27	ENSOANG00000030932 #27	NAE1 (ENSOANG00000001061) #26
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000171246	ENSGT00940000155200.d.a #19	ENSGT01030000235283	ENSGT00940000158339	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000164507	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.a.a #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00390000011620.b.j	ENSGT00390000011620.b.i	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000164507	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.a.a #19	ENSGT00390000017697.b #21	ENSGT00940000155200.d.b #19	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00390000011620.b.i	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000164507	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b.j #19	ENSGT00940000155200.d.a.a #19	ENSGT00940000155200.d.b.i #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Emydidae	ANCESTRAL SPECIES	33	ENSGT00390000011620.b.j	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000164507	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b.j #19	ENSGT00940000155200.d.a.a #19	ENSGT00940000155200.d.b.i #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37
painted turtle	MODERN SPECIES	967														ENSCPBG00000012103 #19	CIAO2B (ENSCPBG00000012102) #21	RRAD (ENSCPBG00000012101) #22	ENSCPBG00000012097	CA7 (ENSCPBG00000012094) #25	PDP2 (ENSCPBG00000012093) #24	NAE1 (ENSCPBG00000012081) #26	TERB1 (ENSCPBG00000012076) #27	DYNC1LI2 (ENSCPBG00000012069) #28	CMTM4 (ENSCPBG00000012067) #29	CMTM3 (ENSCPBG00000012065) #30	CKLF (ENSCPBG00000012062) #33	TK2 (ENSCPBG00000012058) #34	ENSCPBG00000012057 #35	ENSCPBG00000012055	CDH5 (ENSCPBG00000012051) #37
Three-toed box turtle	MODERN SPECIES	60	PEPD (ENSTMTG00000022817)	CHST8 (ENSTMTG00000022820)	KCTD15 (ENSTMTG00000022824)	LSM14A (ENSTMTG00000022829)	SS18L2 (ENSTMTG00000022832)	GARRE1 (ENSTMTG00000022833)	GPI (ENSTMTG00000022834)	WTIP (ENSTMTG00000022835)	ENSTMTG00000022837	UBA2 (ENSTMTG00000022838)	PDCD2L (ENSTMTG00000022839)	ENSTMTG00000022841 #19	ENSTMTG00000022843 #19	ENSTMTG00000022846 #19	CIAO2B (ENSTMTG00000022847) #21	RRAD (ENSTMTG00000022848) #22	ENSTMTG00000022849	ENSTMTG00000022850	PDP2 (ENSTMTG00000022852) #24	CA7 (ENSTMTG00000022853) #25	NAE1 (ENSTMTG00000022854) #26	TERB1 (ENSTMTG00000022856) #27	DYNC1LI2 (ENSTMTG00000022859) #28	CMTM4 (ENSTMTG00000022862) #29	CMTM3 (ENSTMTG00000022863) #30	CKLF (ENSTMTG00000022865) #33	TK2 (ENSTMTG00000022866) #34	ENSTMTG00000022867 #35	ENSTMTG00000022868	CDH5 (ENSTMTG00000022869) #37
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b.i	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.a.a #19	ENSGT00940000155200.d.b.i #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Goode s thornscrub tortoise	MODERN SPECIES	3	KCTD15 (ENSGEVG00005010441)	ENSGEVG00005010559	LSM14A (ENSGEVG00005010715)	SS18L2 (ENSGEVG00005010754)	GARRE1 (ENSGEVG00005010777)	GPI (ENSGEVG00005010824)	WTIP (ENSGEVG00005010949)	ENSGEVG00005011206	UBA2 (ENSGEVG00005011268)	ENSGEVG00005011513 #19	PDCD2L (ENSGEVG00005012279)	ENSGEVG00005012420 #19	ENSGEVG00005013150 #19	ENSGEVG00005013731 #19	CIAO2B (ENSGEVG00005013796) #21	RRAD (ENSGEVG00005013828) #22	ENSGEVG00005013944	PDP2 (ENSGEVG00005014085) #24	CA7 (ENSGEVG00005014133) #25	NAE1 (ENSGEVG00005014412) #26	TERB1 (ENSGEVG00005014450) #27	DYNC1LI2 (ENSGEVG00005014562) #28	CMTM4 (ENSGEVG00005014598) #29	CMTM3 (ENSGEVG00005014624) #30	CKLF (ENSGEVG00005014649) #33	TK2 (ENSGEVG00005014675) #34	ENSGEVG00005014717 #35	ENSGEVG00005014732	CDH5 (ENSGEVG00005014779) #37	CDH11 (ENSGEVG00005015145)	CDH8 (ENSGEVG00005015245)
Abingdon island giant tortoise	MODERN SPECIES	2259												ENSCABG00000008984 #19	ENSCABG00000008987 #19	ENSCABG00000008997 #19	CIAO2B (ENSCABG00000008999) #21	RRAD (ENSCABG00000009003) #22	ENSCABG00000009040	PDP2 (ENSCABG00000009048) #24	CA7 (ENSCABG00000009055) #25	NAE1 (ENSCABG00000009077) #26	TERB1 (ENSCABG00000009276) #27	DYNC1LI2 (ENSCABG00000009281) #28	CMTM4 (ENSCABG00000009367) #29	CMTM3 (ENSCABG00000009369) #30	CKLF (ENSCABG00000009371) #33	TK2 (ENSCABG00000009373) #34	ENSCABG00000009376	CDH5 (ENSCABG00000009392) #37
Chinese turtle	MODERN SPECIES	1642					ENSPSIG00000015334	LSM14A (ENSPSIG00000014378)	GARRE1 (ENSPSIG00000013491)	GPI (ENSPSIG00000011429)	WTIP (ENSPSIG00000010952)	UBA2 (ENSPSIG00000009074)	PDCD2L (ENSPSIG00000008695)	ENSPSIG00000007869 #19	ENSPSIG00000015304 #19	CIAO2B (ENSPSIG00000015187) #21	ENSPSIG00000014518 #19	RRAD (ENSPSIG00000014134) #22	ENSPSIG00000011754	PDP2 (ENSPSIG00000000169) #24	CA7 (ENSPSIG00000011718) #25	NAE1 (ENSPSIG00000007713) #26	TERB1 (ENSPSIG00000006062) #27	DYNC1LI2 (ENSPSIG00000017826) #28	CMTM4 (ENSPSIG00000017570) #29	CMTM3 (ENSPSIG00000017416) #30	TK2 (ENSPSIG00000016844) #34	ENSPSIG00000016794 #35	ENSPSIG00000016372	CDH5 (ENSPSIG00000014793) #37	ENSPSIG00000000165	CDH11 (ENSPSIG00000011532)	ENSPSIG00000000160
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.a.a #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b
Australian saltwater crocodile	MODERN SPECIES	35	CHST8 (ENSCPRG00005004397)	KCTD15 (ENSCPRG00005004399)	ENSCPRG00005004418	ENSCPRG00005004453	LSM14A (ENSCPRG00005004463)	SS18L2 (ENSCPRG00005004548)	GARRE1 (ENSCPRG00005004566)	GPI (ENSCPRG00005004580)	WTIP (ENSCPRG00005004599)	UBA2 (ENSCPRG00005004632)	PDCD2L (ENSCPRG00005004926)	ENSCPRG00005004933 #19	ENSCPRG00005005010 #19	ENSCPRG00005005056 #19	ENSCPRG00005005246 #19	RRAD (ENSCPRG00005005256) #22	ENSCPRG00005005282	PDP2 (ENSCPRG00005005299) #24	ENSCPRG00005005302 #25	ENSCPRG00005005318 #25	NAE1 (ENSCPRG00005005341) #26	TERB1 (ENSCPRG00005005352) #27	DYNC1LI2 (ENSCPRG00005005379) #28	CMTM4 (ENSCPRG00005005386) #29	CMTM3 (ENSCPRG00005005391) #30	TK2 (ENSCPRG00005005398) #34	ENSCPRG00005005407 #35	ENSCPRG00005005421	CDH5 (ENSCPRG00005005443) #37	CDH11 (ENSCPRG00005005508)	ENSCPRG00005005523
Aves	ANCESTRAL SPECIES	22	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000153657.B	ENSGT00940000159100.f	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00940000171283	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319	ENSGT00940000159631	ENSGT00940000159184	ENSGT00950000183186.B.a
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	19	ENSSHBG00005011361	PEPD (ENSSHBG00005011339)	ENSSHBG00005011313	ENSSHBG00005011294	ENSSHBG00005011269	ENSSHBG00005011234	ENSSHBG00005011210	ENSSHBG00005011190	ENSSHBG00005011147	ENSSHBG00005011112	ENSSHBG00005011090	PDCD2L (ENSSHBG00005011043)	ENSSHBG00005011015 #19	ENSSHBG00005010944 #19	CIAO2B (ENSSHBG00005010884) #21	ENSSHBG00005010870 #22	PDP2 (ENSSHBG00005010851) #24	CA7 (ENSSHBG00005010814) #25	NAE1 (ENSSHBG00005010780) #26	TERB1 (ENSSHBG00005010733) #27	ENSSHBG00005010667 #28	ENSSHBG00005010627 #29	ENSSHBG00005010584 #30	CKLF (ENSSHBG00005010557) #33	TK2 (ENSSHBG00005010522) #34	ENSSHBG00005010490 #35	ENSSHBG00005010430	ENSSHBG00005010374 #37	ENSSHBG00005010357	ENSSHBG00005010343	CDH8 (ENSSHBG00005010317)
Kakapo	MODERN SPECIES	4	ENSSHBG00005000249	ENSSHBG00005000261	ENSSHBG00005000267	ENSSHBG00005000272	ENSSHBG00005000273	ENSSHBG00005000275	ENSSHBG00005000277	ENSSHBG00005000280	ENSSHBG00005000283	ENSSHBG00005000285	ENSSHBG00005000289	ENSSHBG00005000292	ENSSHBG00005000294	ENSSHBG00005000296	ENSSHBG00005000297	ENSSHBG00005000298 #22	ENSSHBG00005000301	ENSSHBG00005000303 #28	ENSSHBG00005000305 #29	ENSSHBG00005000308 #30	ENSSHBG00005000309 #37	ENSSHBG00005000312	ENSSHBG00005000314	ENSSHBG00005000317	ENSSHBG00005000320	ENSSHBG00005000322	ENSSHBG00005000324	ENSSHBG00005000326	ENSSHBG00005000328	ENSSHBG00005000330	ENSSHBG00005000334
Golden eagle	MODERN SPECIES	25	CEBPG (ENSACCG00020001148)	PEPD (ENSACCG00020001123)	CHST8 (ENSACCG00020001104)	KCTD15 (ENSACCG00020001091)	ENSACCG00020001071	LSM14A (ENSACCG00020001040)	SS18L2 (ENSACCG00020001012)	GARRE1 (ENSACCG00020000988)	GPI (ENSACCG00020000962)	WTIP (ENSACCG00020000941)	UBA2 (ENSACCG00020000903)	PDCD2L (ENSACCG00020000879)	ENSACCG00020000836 #19	ENSACCG00020000761 #19	CIAO2B (ENSACCG00020000732) #21	RRAD (ENSACCG00020000710) #22	PDP2 (ENSACCG00020000696) #24	CA7 (ENSACCG00020000679) #25	NAE1 (ENSACCG00020000646) #26	TERB1 (ENSACCG00020000619) #27	DYNC1LI2 (ENSACCG00020000589) #28	CMTM4 (ENSACCG00020000572) #29	CMTM3 (ENSACCG00020000540) #30	CKLF (ENSACCG00020000527) #33	TK2 (ENSACCG00020000506) #34	ENSACCG00020000488 #35	ENSACCG00020000478	CDH5 (ENSACCG00020000457) #37	CDH11 (ENSACCG00020000432)	CDH8 (ENSACCG00020004323)	ADAMTS18 (ENSACCG00020004303)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b
Great tit	MODERN SPECIES	2			ENSPMJG00000003954	CDH11 (ENSPMJG00000003947)	CDH5 (ENSPMJG00000003935) #37	ENSPMJG00000003930	ENSPMJG00000003929 #35	TK2 (ENSPMJG00000003927) #34	ENSPMJG00000003921	CMTM3 (ENSPMJG00000003915) #30	CMTM4 (ENSPMJG00000003912) #29	DYNC1LI2 (ENSPMJG00000003882) #28	TERB1 (ENSPMJG00000003867) #27	CES3 (ENSPMJG00000003857) #19	CIAO2B (ENSPMJG00000003852) #21	RRAD (ENSPMJG00000003845) #22	PDP2 (ENSPMJG00000003841) #24	CA7 (ENSPMJG00000003773) #25	NAE1 (ENSPMJG00000003756) #26	ENSPMJG00000003751	UBA2 (ENSPMJG00000003731)	ENSPMJG00000003721	GPI (ENSPMJG00000003705)	GARRE1 (ENSPMJG00000003698)	SS18L2 (ENSPMJG00000003689)	LSM14A (ENSPMJG00000003684)	ENSPMJG00000003666	KCTD15 (ENSPMJG00000003650)	CHST8 (ENSPMJG00000003649)	PEPD (ENSPMJG00000003633)	CEBPG (ENSPMJG00000003612)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b
Flycatcher	MODERN SPECIES	2	PEPD (ENSFALG00000007783)	CHST8 (ENSFALG00000007781)	KCTD15 (ENSFALG00000007779)	ENSFALG00000007775	LSM14A (ENSFALG00000007771)	ENSFALG00000007767	ENSFALG00000007756	ENSFALG00000007751	ENSFALG00000027223	ENSFALG00000007738	ENSFALG00000026355	ENSFALG00000007734	ENSFALG00000007728 #19	ENSFALG00000007722 #19	CIAO2B (ENSFALG00000007720) #21	RRAD (ENSFALG00000007717) #22	PDP2 (ENSFALG00000014347) #24	CA7 (ENSFALG00000007714) #25	NAE1 (ENSFALG00000007698) #26	ENSFALG00000007680	TERB1 (ENSFALG00000007676) #27	DYNC1LI2 (ENSFALG00000007667) #28	CMTM4 (ENSFALG00000007653) #29	CMTM3 (ENSFALG00000007647) #30	TK2 (ENSFALG00000007640) #34	ENSFALG00000025031 #35	ENSFALG00000007633	CDH5 (ENSFALG00000007625) #37	ENSFALG00000023637	ENSFALG00000026167	CDH11 (ENSFALG00000007617)
Passeriformes_g	ANCESTRAL SPECIES	46	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b
Medium ground finch	MODERN SPECIES	148															CES3 (ENSGFOG00000009276) #19	RRAD (ENSGFOG00000009155) #22	PDP2 (ENSGFOG00000011210) #24	CA7 (ENSGFOG00000011205) #25	NAE1 (ENSGFOG00000011195) #26	ENSGFOG00000011189 #27	DYNC1LI2 (ENSGFOG00000011178) #28	CMTM4 (ENSGFOG00000011172) #29	CMTM3 (ENSGFOG00000011167) #30	TK2 (ENSGFOG00000011157) #34	CDH5 (ENSGFOG00000011153) #37	CDH11 (ENSGFOG00000011145)
Passeroidea	ANCESTRAL SPECIES	46	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b
Zebra finch	MODERN SPECIES	2	KCTD15 (ENSTGUG00000027555)	ENSTGUG00000009520	ENSTGUG00000022257	LSM14A (ENSTGUG00000009535)	GARRE1 (ENSTGUG00000009542)	GPI (ENSTGUG00000009572)	ENSTGUG00000019366	ENSTGUG00000024385	ENSTGUG00000019808	UBA2 (ENSTGUG00000009609)	PDCD2L (ENSTGUG00000009619)	ENSTGUG00000020357 #19	ENSTGUG00000009626 #19	ENSTGUG00000009678 #19	CIAO2B (ENSTGUG00000009680) #21	RRAD (ENSTGUG00000009686) #22	PDP2 (ENSTGUG00000009698) #24	CA7 (ENSTGUG00000009706) #25	NAE1 (ENSTGUG00000009718) #26	ENSTGUG00000014379	ENSTGUG00000009737	ENSTGUG00000009741 #27	ENSTGUG00000029390 #27	DYNC1LI2 (ENSTGUG00000009746) #28	CMTM4 (ENSTGUG00000029167) #29	CMTM3 (ENSTGUG00000026773) #30	CKLF (ENSTGUG00000009800) #33	TK2 (ENSTGUG00000009809) #34	ENSTGUG00000023009 #35	ENSTGUG00000009810	CDH5 (ENSTGUG00000009813) #37
Common canary	MODERN SPECIES	36	RHPN2 (ENSSCAG00000011906)	GPATCH1 (ENSSCAG00000011898)	PEPD (ENSSCAG00000011891)	CEBPG (ENSSCAG00000011879)	CEBPA (ENSSCAG00000011875)	SLC7A10 (ENSSCAG00000011789)	LRP3 (ENSSCAG00000011737)	CHST8 (ENSSCAG00000011728)	KCTD15 (ENSSCAG00000011722)	ENSSCAG00000011716	UBA2 (ENSSCAG00000011705)	ENSSCAG00000011702	ENSSCAG00000011691 #19	ENSSCAG00000011674 #19	CIAO2B (ENSSCAG00000011662) #21	RRAD (ENSSCAG00000011651) #22	LSM14A (ENSSCAG00000011643)	SS18L2 (ENSSCAG00000011640)	GARRE1 (ENSSCAG00000011632)	GPI (ENSSCAG00000011522)	ENSSCAG00000011487	PDP2 (ENSSCAG00000011486) #24	CA7 (ENSSCAG00000011482) #25	NAE1 (ENSSCAG00000011083) #26	ENSSCAG00000010988	TERB1 (ENSSCAG00000010977) #27	DYNC1LI2 (ENSSCAG00000010867) #28	CMTM4 (ENSSCAG00000010842) #29	CMTM3 (ENSSCAG00000010838) #30	TK2 (ENSSCAG00000010828) #34	ENSSCAG00000010823
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319
Chicken	MODERN SPECIES	2	CEBPG (ENSGALG00010025114)	PEPD (ENSGALG00010025200)	CHST8 (ENSGALG00010025230)	KCTD15 (ENSGALG00010009079)	ENSGALG00010009138	LSM14A (ENSGALG00010009192)	SS18L2 (ENSGALG00010009334)	GARRE1 (ENSGALG00010009355)	GPI (ENSGALG00010009385)	WTIP (ENSGALG00010009398)	UBA2 (ENSGALG00010009494)	ENSGALG00010010494 #19	ENSGALG00010009619 #19	ENSGALG00010009525 #19	FAM96B (ENSGALG00010009652) #21	RRAD (ENSGALG00010009666) #22	PDP2 (ENSGALG00010009761) #24	CA7 (ENSGALG00010006979) #25	NAE1 (ENSGALG00010007041) #27	DYNC1LI2 (ENSGALG00010007092) #28	CMTM4 (ENSGALG00010010374) #29	CMTM3 (ENSGALG00010007102) #30	CKLF (ENSGALG00010007114) #33	TK2 (ENSGALG00010007135) #34	ENSGALG00010007146 #35	BEAN1 (ENSGALG00010007243)	CDH5 (ENSGALG00010007270) #37	CDH11 (ENSGALG00010007302)	CDH8 (ENSGALG00010007678)	ADAMTS18 (ENSGALG00010007698)	ENSGALG00010007735
Turkey	MODERN SPECIES	4	ENSMGAG00000022680	ENSMGAG00000006537	ENSMGAG00000018589	ENSMGAG00000006509	ENSMGAG00000021502	ENSMGAG00000006440 #37	ENSMGAG00000006431 #34	ENSMGAG00000019293	ENSMGAG00000006420 #30	ENSMGAG00000006413 #29	ENSMGAG00000006374 #28	ENSMGAG00000006358 #27	ENSMGAG00000006278 #26	ENSMGAG00000006235 #25	ENSMGAG00000015611 #24	ENSMGAG00000006222 #22	ENSMGAG00000006219 #21	ENSMGAG00000017263 #19	ENSMGAG00000020122 #19	ENSMGAG00000017854 #19	ENSMGAG00000020371	ENSMGAG00000018549	ENSMGAG00000006114	ENSMGAG00000006104	ENSMGAG00000006052	ENSMGAG00000018236	ENSMGAG00000006036	ENSMGAG00000018995	ENSMGAG00000006009	ENSMGAG00000005984	CHST8 (ENSMGAG00000005979)
Japanese quail	MODERN SPECIES	2	PEPD (ENSCJPG00005014621)	CHST8 (ENSCJPG00005014622)	KCTD15 (ENSCJPG00005014623)	ENSCJPG00005014624	LSM14A (ENSCJPG00005014625)	SS18L2 (ENSCJPG00005014626)	GARRE1 (ENSCJPG00005014627)	GPI (ENSCJPG00005014628)	WTIP (ENSCJPG00005014630)	UBA2 (ENSCJPG00005014631)	PDCD2L (ENSCJPG00005014632)	ENSCJPG00005014633 #19	ENSCJPG00005014634 #19	ENSCJPG00005014635 #19	CIAO2B (ENSCJPG00005014636) #21	RRAD (ENSCJPG00005014637) #22	CA7 (ENSCJPG00005014640) #25	NAE1 (ENSCJPG00005014641) #26	TERB1 (ENSCJPG00005014642) #27	DYNC1LI2 (ENSCJPG00005014643) #28	CMTM4 (ENSCJPG00005014644) #29	CMTM3 (ENSCJPG00005014645) #30	ENSCJPG00005014646 #33	TK2 (ENSCJPG00005014647) #34	ENSCJPG00005014648 #35	ENSCJPG00005014649	CDH5 (ENSCJPG00005014650) #37	CDH11 (ENSCJPG00005014655)	CDH8 (ENSCJPG00005014665)	ADAMTS18 (ENSCJPG00005014678)	ENSCJPG00005014680
Anatidae	ANCESTRAL SPECIES	17	ENSGT00940000160676	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00390000011620.b	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000155200.d.a.b #19	ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319
Pink-footed goose	MODERN SPECIES	28	CEBPG (ENSABRG00000009845)	PEPD (ENSABRG00000009852)	CHST8 (ENSABRG00000009864)	KCTD15 (ENSABRG00000009868)	ENSABRG00000009874	LSM14A (ENSABRG00000009888)	SS18L2 (ENSABRG00000009896)	GARRE1 (ENSABRG00000009931)	GPI (ENSABRG00000009969)	WTIP (ENSABRG00000009998)	UBA2 (ENSABRG00000010006)	PDCD2L (ENSABRG00000010029)	ENSABRG00000010045 #19	ENSABRG00000010080 #19	CIAO2B (ENSABRG00000010122) #21	RRAD (ENSABRG00000010135) #22	PDP2 (ENSABRG00000010143) #24	CA7 (ENSABRG00000010175) #25	NAE1 (ENSABRG00000010292) #26	TERB1 (ENSABRG00000010307) #27	DYNC1LI2 (ENSABRG00000010324) #28	CMTM4 (ENSABRG00000010350) #29	CMTM3 (ENSABRG00000010357) #30	TK2 (ENSABRG00000010363) #34	ENSABRG00000010367 #35	ENSABRG00000010374	CDH5 (ENSABRG00000010423) #37	CDH11 (ENSABRG00000010473)	CDH8 (ENSABRG00000010544)	ADAMTS18 (ENSABRG00000010647)	ENSABRG00000010910
Duck	MODERN SPECIES	3	CEBPG (ENSAPLG00000000568)	PEPD (ENSAPLG00000008402)	CHST8 (ENSAPLG00000009142)	KCTD15 (ENSAPLG00000009251)	LSM14A (ENSAPLG00000009420)	ENSAPLG00000019738	GARRE1 (ENSAPLG00000009718)	GPI (ENSAPLG00000010107)	WTIP (ENSAPLG00000023301)	UBA2 (ENSAPLG00000011122)	PDCD2L (ENSAPLG00000011770)	ENSAPLG00000011908 #19	ENSAPLG00000028614 #19	ENSAPLG00000023248 #19	CIAO2B (ENSAPLG00000026091) #21	RRAD (ENSAPLG00000012711) #22	PDP2 (ENSAPLG00000000609) #24	CA7 (ENSAPLG00000012712) #25	NAE1 (ENSAPLG00000013192) #26	TERB1 (ENSAPLG00000013612) #27	DYNC1LI2 (ENSAPLG00000013844) #28	CMTM3 (ENSAPLG00000014361) #30	TK2 (ENSAPLG00000030486) #34	ENSAPLG00000026582 #35	ENSAPLG00000014466	CDH5 (ENSAPLG00000014485) #37	CDH11 (ENSAPLG00000015154)	ENSAPLG00000027372	CDH8 (ENSAPLG00000007743)	ADAMTS18 (ENSAPLG00000008153)	ENSAPLG00000008904
African ostrich	MODERN SPECIES	594											UBA2 (ENSSCUG00000009027)	PDCD2L (ENSSCUG00000009022)	ENSSCUG00000009015 #19	ENSSCUG00000009012 #19	CIAO2B (ENSSCUG00000009011) #21	RRAD (ENSSCUG00000009010) #22	PDP2 (ENSSCUG00000009008) #24	CA7 (ENSSCUG00000009006) #25	NAE1 (ENSSCUG00000009003) #26	TERB1 (ENSSCUG00000009001) #27	DYNC1LI2 (ENSSCUG00000008998) #28	CMTM3 (ENSSCUG00000008988) #30	CKLF (ENSSCUG00000008987) #33	TK2 (ENSSCUG00000008986) #34	ENSSCUG00000008982	CDH5 (ENSSCUG00000008979) #37	CDH11 (ENSSCUG00000008972)
Lepidosauria	ANCESTRAL SPECIES	29														ENSGT00940000155200.d.b #19	ENSGT00390000017697.b #21	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
tuatara	MODERN SPECIES	1547														ENSSPUG00000000837 #19	ENSSPUG00000000843 #21	RRAD (ENSSPUG00000000855) #22	PDP2 (ENSSPUG00000000893) #24	CA7 (ENSSPUG00000000911) #25	NAE1 (ENSSPUG00000001064) #26	TERB1 (ENSSPUG00000001074) #27	DYNC1LI2 (ENSSPUG00000001112) #28	CMTM4 (ENSSPUG00000001132) #29	CMTM3 (ENSSPUG00000001140) #30	CKLF (ENSSPUG00000001146) #33	TK2 (ENSSPUG00000001156) #34	ENSSPUG00000001167 #35	ENSSPUG00000001177	CDH5 (ENSSPUG00000001185) #37	CDH11 (ENSSPUG00000001223)
Episquamata	ANCESTRAL SPECIES	11	ENSGT00390000018598	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT01030000234613.a.b #9	ENSGT00940000156252 #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
Laterata	ANCESTRAL SPECIES	19	ENSGT00390000018598	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00950000182966.A	ENSGT01030000234613.a.b #9	ENSGT00940000156252 #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000008037	THAP11 (ENSPMRG00000008033)	NUTF2 (ENSPMRG00000008028)	EDC4 (ENSPMRG00000008009)	NRN1L (ENSPMRG00000008004)	PSKH1 (ENSPMRG00000007996)	ENSPMRG00000007989	ENSPMRG00000007981	EXOC3L1 (ENSPMRG00000007976) #9	E2F4 (ENSPMRG00000007959) #8	ELMO3 (ENSPMRG00000007947) #7	ENSPMRG00000007940	TMEM208 (ENSPMRG00000007936)	ZDHHC1 (ENSPMRG00000007928)	TPPP3 (ENSPMRG00000007922)	RRAD (ENSPMRG00000007919) #22	PDP2 (ENSPMRG00000007917) #24	CA7 (ENSPMRG00000007865) #25	NAE1 (ENSPMRG00000007857) #26	TERB1 (ENSPMRG00000007847) #27	DYNC1LI2 (ENSPMRG00000009835) #28	CMTM4 (ENSPMRG00000009828) #29	CMTM3 (ENSPMRG00000009820) #30	TK2 (ENSPMRG00000009758) #34	ENSPMRG00000009722 #35	ENSPMRG00000009712	CDH5 (ENSPMRG00000009690) #37	ENSPMRG00000009674	CDH11 (ENSPMRG00000009645)	ENSPMRG00000009637	ENSPMRG00000009635
Argentine black and white tegu	MODERN SPECIES	57	RANBP10 (ENSSMRG00000008752)	TSNAXIP1 (ENSSMRG00000008758)	ENSSMRG00000008770	ENSSMRG00000008772	NUTF2 (ENSSMRG00000008773)	EDC4 (ENSSMRG00000008780)	NRN1L (ENSSMRG00000011002)	PSKH1 (ENSSMRG00000011009)	EXOC3L1 (ENSSMRG00000011010) #9	E2F4 (ENSSMRG00000011011) #8	ELMO3 (ENSSMRG00000011015) #7	ENSSMRG00000011018	TMEM208 (ENSSMRG00000011019)	ZDHHC1 (ENSSMRG00000011021)	TPPP3 (ENSSMRG00000011023)	RRAD (ENSSMRG00000011024) #22	CA7 (ENSSMRG00000011027) #25	NAE1 (ENSSMRG00000011106) #26	TERB1 (ENSSMRG00000011109) #27	DYNC1LI2 (ENSSMRG00000011114) #28	CMTM4 (ENSSMRG00000011134) #29	CMTM3 (ENSSMRG00000011135) #30	CKLF (ENSSMRG00000011136) #33	TK2 (ENSSMRG00000011139) #34	ENSSMRG00000011142 #35	ENSSMRG00000011147	CDH5 (ENSSMRG00000011152) #37	CDH11 (ENSSMRG00000011205)	CDH8 (ENSSMRG00000011246)	ADAMTS18 (ENSSMRG00000011269)	VAT1L (ENSSMRG00000011492)
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00390000018598	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT01030000234613.a.b #9	ENSGT00940000156252 #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
Elapidae	ANCESTRAL SPECIES	17	ENSGT00390000018598	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b.e.a	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT01030000234613.a.b #9	ENSGT00940000156252.d #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b.p	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757.c #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00390000003044	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b.e.a	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT00950000182966.A	ENSGT01030000234613.a.b #9	ENSGT00940000156252.d #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b.p	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757.c #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00530000063956.b.b #35	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00390000018598	ENSGT00390000006585	ENSGT00510000047030	ENSGT00510000047791	ENSGT00530000063853.a.b.e.a	ENSGT00940000157041.a	ENSGT00940000154494.b	ENSGT00950000182966.A	ENSGT01030000234613.a.b #9	ENSGT00940000156252.d.a.b #8	ENSGT00940000159455 #7	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000159191	ENSGT00940000153875.d.b.p	ENSGT00940000159836 #22	ENSGT00940000160687 #24	ENSGT00940000159757.c #25	ENSGT00550000074901 #26	ENSGT00390000005075 #27	ENSGT00390000008295.a #28	ENSGT00940000159573 #29	ENSGT00940000160432 #30	ENSGT00940000162264 #33	ENSGT00940000158005 #34	ENSGT00940000165226	ENSGT00940000160587 #37	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553	ENSGT00940000159631
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	120	ENSPTXG00000008061	ENSPTXG00000008060	ENSPTXG00000008059	ENSPTXG00000008057	ENSPTXG00000008055	ENSPTXG00000008053	ENSPTXG00000008050	ENSPTXG00000008047	ENSPTXG00000008045 #9	ENSPTXG00000008044 #8	ENSPTXG00000008039 #7	ENSPTXG00000008021	ENSPTXG00000008019	ENSPTXG00000008018	ENSPTXG00000008017	ENSPTXG00000008010 #22	ENSPTXG00000008008 #24	ENSPTXG00000007836 #25	ENSPTXG00000007835 #26	ENSPTXG00000007833 #27	ENSPTXG00000007830 #28
Eastern brown snake	MODERN SPECIES	119	THAP11 (ENSPTXG00000018199)	ENSPTXG00000018198	ENSPTXG00000018197	ENSPTXG00000018196	ENSPTXG00000018195	ENSPTXG00000018194	ENSPTXG00000018193	ENSPTXG00000018192 #9	ENSPTXG00000018191 #8	ENSPTXG00000018190 #8	ENSPTXG00000018189 #7	ENSPTXG00000018188	ENSPTXG00000018187	ENSPTXG00000018186	ENSPTXG00000018185	ENSPTXG00000018184 #22	ENSPTXG00000018183 #24	ENSPTXG00000018182 #25	ENSPTXG00000018173 #26	ENSPTXG00000018170 #27	ENSPTXG00000018169 #28
Mainland tiger snake	MODERN SPECIES	41	ENSNSUG00000009482	ENSNSUG00000009483	TSNAXIP1 (ENSNSUG00000009485)	ENSNSUG00000009489	EDC4 (ENSNSUG00000009493)	NRN1L (ENSNSUG00000009506)	PSKH1 (ENSNSUG00000009507)	ENSNSUG00000009508	ENSNSUG00000009509 #9	ENSNSUG00000009510 #8	E2F4 (ENSNSUG00000009511) #8	ELMO3 (ENSNSUG00000009512) #7	ENSNSUG00000009776	TMEM208 (ENSNSUG00000009777)	ZDHHC1 (ENSNSUG00000009778)	RRAD (ENSNSUG00000009780) #22	PDP2 (ENSNSUG00000009783) #24	CA7 (ENSNSUG00000009784) #25	NAE1 (ENSNSUG00000009831) #26	TERB1 (ENSNSUG00000010169) #27	DYNC1LI2 (ENSNSUG00000010172) #28	CMTM4 (ENSNSUG00000010174) #29	ENSNSUG00000010176 #30	TK2 (ENSNSUG00000010178) #34	ENSNSUG00000010288	CDH5 (ENSNSUG00000010302) #37	CDH11 (ENSNSUG00000010313)	CDH8 (ENSNSUG00000010380)	ADAMTS18 (ENSNSUG00000010393)	NUDT7 (ENSNSUG00000010397)	VAT1L (ENSNSUG00000010399)
Blue-lipped sea krait	MODERN SPECIES	4719																RRAD (ENSLLTG00000003395) #22
Indian cobra	MODERN SPECIES	12	ENSNNAG00000014768	THAP11 (ENSNNAG00000014739)	NUTF2 (ENSNNAG00000014714)	EDC4 (ENSNNAG00000013835)	NRN1L (ENSNNAG00000013787)	PSKH1 (ENSNNAG00000013781)	ENSNNAG00000013769	CTRL (ENSNNAG00000013758)	EXOC3L1 (ENSNNAG00000013704) #9	E2F4 (ENSNNAG00000013662) #8	ELMO3 (ENSNNAG00000013593) #7	ENSNNAG00000013558	TMEM208 (ENSNNAG00000013539)	ZDHHC1 (ENSNNAG00000013515)	TPPP3 (ENSNNAG00000013506)	RRAD (ENSNNAG00000013492) #22	PDP2 (ENSNNAG00000013482) #24	CA7 (ENSNNAG00000013214) #25	NAE1 (ENSNNAG00000013175) #26	TERB1 (ENSNNAG00000013131) #27	DYNC1LI2 (ENSNNAG00000013105) #28	CMTM4 (ENSNNAG00000013091) #29	CMTM3 (ENSNNAG00000013059) #30	CKLF (ENSNNAG00000013042) #33	TK2 (ENSNNAG00000013014) #34	ENSNNAG00000013006 #35	ENSNNAG00000012924	CDH5 (ENSNNAG00000012804) #37	CDH11 (ENSNNAG00000012759)	ENSNNAG00000012750	ENSNNAG00000012734
Lizard	MODERN SPECIES	909	ENSACAG00000001517	THAP11 (ENSACAG00000001520)	NUTF2 (ENSACAG00000043331)	EDC4 (ENSACAG00000001561)	NRN1L (ENSACAG00000035762)	PSKH1 (ENSACAG00000001729)	CTRL (ENSACAG00000001737)	EXOC3L1 (ENSACAG00000001844) #9	E2F4 (ENSACAG00000028484) #8	ENSACAG00000040320	ELMO3 (ENSACAG00000001972) #7	ENSACAG00000002306	TMEM208 (ENSACAG00000002308)	ENSACAG00000002334	ENSACAG00000002364	RRAD (ENSACAG00000002380) #22	PDP2 (ENSACAG00000002437) #24	NAE1 (ENSACAG00000002445) #26	TERB1 (ENSACAG00000002618) #27	ENSACAG00000035787	DYNC1LI2 (ENSACAG00000002640) #28	CMTM4 (ENSACAG00000040539) #29	ENSACAG00000036514	CMTM3 (ENSACAG00000002812) #30	CKLF (ENSACAG00000029155) #33	ENSACAG00000000421 #34	ENSACAG00000042846 #35	ENSACAG00000042826
Anura	ANCESTRAL SPECIES	10	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000160021	ENSGT00940000156469	ENSGT00940000162646	ENSGT00940000153657.B	ENSGT00940000159100	ENSGT00940000159496	ENSGT00940000154415	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000167949.b	ENSGT00940000159836 #22	ENSGT00940000165234	ENSGT00940000160687 #24	ENSGT00940000159757 #25	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116	ENSGT00940000156978	ENSGT00940000155581.C	ENSGT00390000003374	ENSGT00940000158707.a.b
Leishan spiny toad	MODERN SPECIES	1	GARRE1 (ENSLLEG00000011560)	GPI (ENSLLEG00000011764)	WTIP (ENSLLEG00000012391)	ENSLLEG00000012631	UBA2 (ENSLLEG00000012704)	ENSLLEG00000013268	ENSLLEG00000013439 #19	ENSLLEG00000013306 #19	ENSLLEG00000013532 #19	ENSLLEG00000013652 #19	ENSLLEG00000014191	ENSLLEG00000014214 #19	ENSLLEG00000014389 #19	ENSLLEG00000015424 #19	ENSLLEG00000015583	RRAD (ENSLLEG00000015704) #22	ENSLLEG00000015769	PDP2 (ENSLLEG00000015997) #24	CA7 (ENSLLEG00000016009) #25	MVD (ENSLLEG00000016082)	CYBA (ENSLLEG00000016189)	IL17C (ENSLLEG00000016273)	ZC3H18 (ENSLLEG00000016317)	ENSLLEG00000016489	ENSLLEG00000016515	ENSLLEG00000016585	ZFPM1 (ENSLLEG00000016686)	ENSLLEG00000017134	ENSLLEG00000017151	BANP (ENSLLEG00000017195)	ENSLLEG00000017522
Frog	MODERN SPECIES	4	cebpa (ENSXETG00000042713)	pepd (ENSXETG00000018297)	ENSXETG00000042173	ENSXETG00000048220	ENSXETG00000044155	kctd15 (ENSXETG00000016868)	lsm14a (ENSXETG00000002359)	ss18l2 (ENSXETG00000043471)	garre1 (ENSXETG00000032218)	gpi (ENSXETG00000002361)	wtip (ENSXETG00000042605)	uba2 (ENSXETG00000002374)	ENSXETG00000044376	ces5a (ENSXETG00000039742) #19	ENSXETG00000048573	rrad (ENSXETG00000017408) #22	cdh16 (ENSXETG00000017410)	ENSXETG00000017419 #24	ca7 (ENSXETG00000017420) #25	mvd (ENSXETG00000017427)	cyba (ENSXETG00000017431)	il17c (ENSXETG00000017433)	ENSXETG00000042766	zc3h18 (ENSXETG00000036558)	trhr2 (ENSXETG00000023989)	zfpm1 (ENSXETG00000023988)	znf469 (ENSXETG00000037178)	znf516 (ENSXETG00000016600)	ENSXETG00000048591	ca5b (ENSXETG00000016594)	slc7a5 (ENSXETG00000016585)