Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162660.b.e.b	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00400000022873
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Glires	ANCESTRAL SPECIES	1	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c #15	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.c.a.a #15	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Northern American deer mouse	MODERN SPECIES		Atl3 (ENSPEMG00000017714) #7	Plaat3 (ENSPEMG00000015751) #8	Lgals12 (ENSPEMG00000002696) #9	Plaat5 (ENSPEMG00000007949) #10	ENSPEMG00000030267 #11	Slc22a19 (ENSPEMG00000011237) #12	ENSPEMG00000025385 #13	ENSPEMG00000017469 #14	ENSPEMG00000025227 #15	ENSPEMG00000008490 #16	Slc22a8 (ENSPEMG00000005685) #17	Slc22a6 (ENSPEMG00000010064) #18	ENSPEMG00000024846 #19	Chrm1 (ENSPEMG00000027279) #20	Slc3a2 (ENSPEMG00000017251) #21	Wdr74 (ENSPEMG00000008678) #22	Tex54 (ENSPEMG00000012036) #23	Stx5a (ENSPEMG00000017791) #24	Nxf1 (ENSPEMG00000006139) #25	Tmem223 (ENSPEMG00000017084) #26	Tmem179b (ENSPEMG00000011859) #27	Taf6l (ENSPEMG00000011799) #28	Polr2g (ENSPEMG00000000685) #29	Zbtb3 (ENSPEMG00000018613) #30	Ttc9c (ENSPEMG00000026108) #31	Hnrnpul2 (ENSPEMG00000015546) #32	Gng3 (ENSPEMG00000028724) #33	Bscl2 (ENSPEMG00000031381) #34	Lrrn4cl (ENSPEMG00000016106) #35	Ubxn1 (ENSPEMG00000015778) #36	Uqcc3 (ENSPEMG00000030804) #37
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	16	Spindoc (ENSMOCG00000016927)	ENSMOCG00000016523	ENSMOCG00000001558	Atl3 (ENSMOCG00000014305) #7	Plaat3 (ENSMOCG00000016945) #8	Lgals12 (ENSMOCG00000019635) #9	Plaat5 (ENSMOCG00000016896) #10	Slc22a19 (ENSMOCG00000020438) #12	ENSMOCG00000001921	ENSMOCG00000019218 #16	ENSMOCG00000002914 #16	Slc22a8 (ENSMOCG00000011371) #17	Slc22a6 (ENSMOCG00000021104) #18	Chrm1 (ENSMOCG00000002497) #20	ENSMOCG00000009004 #21	ENSMOCG00000003857 #22	Tex54 (ENSMOCG00000020857) #23	Stx5a (ENSMOCG00000021699) #24	Nxf1 (ENSMOCG00000000939) #25	Tmem223 (ENSMOCG00000010044) #26	Tmem179b (ENSMOCG00000012843) #27	Taf6l (ENSMOCG00000019616) #28	Polr2g (ENSMOCG00000010638) #29	Zbtb3 (ENSMOCG00000002963) #30	Ttc9c (ENSMOCG00000019481) #31	Hnrnpul2 (ENSMOCG00000020000) #32	Gng3 (ENSMOCG00000020628) #33	ENSMOCG00000009001	Lrrn4cl (ENSMOCG00000009512) #35	Ubxn1 (ENSMOCG00000010707) #36	Uqcc3 (ENSMOCG00000009973) #37
Prairie vole	MODERN SPECIES	12	Terf2 (ENSMOCG00000009801)	Cyb5b (ENSMOCG00000009682)	Nfat5 (ENSMOCG00000003169)	ENSMOCG00000020056	ENSMOCG00000016986	ENSMOCG00000011000	Hhip (ENSMOCG00000006070)	ENSMOCG00000020653	Anapc10 (ENSMOCG00000017245)	Abce1 (ENSMOCG00000013213)	Otud4 (ENSMOCG00000012639)	Smad1 (ENSMOCG00000002828)	Mmaa (ENSMOCG00000000542)	1700011L22Rik (ENSMOCG00000010556)	Zfp827 (ENSMOCG00000020399)	ENSMOCG00000002657 #22	Lsm6 (ENSMOCG00000020049)	Slc10a7 (ENSMOCG00000007838)	ENSMOCG00000017327	Pou4f2 (ENSMOCG00000014811)	Ttc29 (ENSMOCG00000010925)	ENSMOCG00000018841	ENSMOCG00000010337	Ednra (ENSMOCG00000017745)	ENSMOCG00000016788	Rasd2 (ENSMOCG00000014090)	Hmox1 (ENSMOCG00000005130)	Tom1 (ENSMOCG00000010687)	Hmgxb4 (ENSMOCG00000005178)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646.j #21	ENSGT00940000156646.i #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Chinese hamster chok1gshd	MODERN SPECIES	401	Mark2 (ENSCGRG00001010551)	Spindoc (ENSCGRG00001001090)	Zfta (ENSCGRG00001004358)	Rtn3 (ENSCGRG00001018871)	Atl3 (ENSCGRG00001018013) #7	Plaat3 (ENSCGRG00001007573) #8	Lgals12 (ENSCGRG00001010564) #9	Plaat5 (ENSCGRG00001019087) #10	Slc22a19 (ENSCGRG00001022436) #12	ENSCGRG00001021584	ENSCGRG00001003608 #16	Slc22a8 (ENSCGRG00001007311) #17	Slc22a6 (ENSCGRG00001015989) #18	Chrm1 (ENSCGRG00001002011) #20	Slc3a2 (ENSCGRG00001025072) #21	Wdr74 (ENSCGRG00001004246) #22	Tex54 (ENSCGRG00001012530) #23	Stx5a (ENSCGRG00001018343) #24	Nxf1 (ENSCGRG00001013721) #25	Tmem223 (ENSCGRG00001023350) #26	Tmem179b (ENSCGRG00001025014) #27	Taf6l (ENSCGRG00001007467) #28	ENSCGRG00001022692 #29	Zbtb3 (ENSCGRG00001006797) #30	Ttc9c (ENSCGRG00001011015) #31	Hnrnpul2 (ENSCGRG00001017076) #32	Gng3 (ENSCGRG00001014012) #33	Bscl2 (ENSCGRG00001015829) #34	Lrrn4cl (ENSCGRG00001009869) #35	Ubxn1 (ENSCGRG00001006327) #36	Uqcc3 (ENSCGRG00001016702) #37
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000014179	Spindoc (ENSMAUG00000013145)	Zfta (ENSMAUG00000013334)	ENSMAUG00000013612	Atl3 (ENSMAUG00000014736) #7	Plaat3 (ENSMAUG00000013633) #8	Lgals12 (ENSMAUG00000014489) #9	Plaat5 (ENSMAUG00000013292) #10	Slc22a19 (ENSMAUG00000013315) #12	ENSMAUG00000013367 #16	Slc22a8 (ENSMAUG00000013177) #17	Slc22a6 (ENSMAUG00000013676) #18	Chrm1 (ENSMAUG00000013069) #20	ENSMAUG00000013060 #21	ENSMAUG00000013043 #21	Wdr74 (ENSMAUG00000012992) #22	Tex54 (ENSMAUG00000013004) #23	Stx5a (ENSMAUG00000013701) #24	Nxf1 (ENSMAUG00000014572) #25	Tmem223 (ENSMAUG00000012961) #26	Tmem179b (ENSMAUG00000012885) #27	Taf6l (ENSMAUG00000015095) #28	Polr2g (ENSMAUG00000013079) #29	Zbtb3 (ENSMAUG00000013055) #30	Ttc9c (ENSMAUG00000013136) #31	Hnrnpul2 (ENSMAUG00000013163) #32	Gng3 (ENSMAUG00000012624) #33	Bscl2 (ENSMAUG00000012700) #34	Lrrn4cl (ENSMAUG00000012372) #35	Ubxn1 (ENSMAUG00000012982) #36	ENSMAUG00000013717
Murinae	ANCESTRAL SPECIES		ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Mus	ANCESTRAL SPECIES		ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.c.a.a #15	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Mouse	MODERN SPECIES	10	Rtn3 (ENSMUSG00000024758)	Atl3 (ENSMUSG00000024759) #7	Plaat3 (ENSMUSG00000060675) #8	Lgals12 (ENSMUSG00000024972) #9	Plaat5 (ENSMUSG00000024973) #10	Slc22a19 (ENSMUSG00000024757) #12	Slc22a26 (ENSMUSG00000053303) #15	Slc22a27 (ENSMUSG00000067656) ##16	Slc22a28 (ENSMUSG00000063590) ##16	Slc22a29 (ENSMUSG00000075044) ##16	Slc22a30 (ENSMUSG00000052562) ##16	Slc22a8 (ENSMUSG00000063796) #17	Slc22a6 (ENSMUSG00000024650) #18	Chrm1 (ENSMUSG00000032773) #20	Slc3a2 (ENSMUSG00000010095) #21	Wdr74 (ENSMUSG00000042729) #22	Tex54 (ENSMUSG00000090840) #23	Stx5a (ENSMUSG00000010110) #24	Nxf1 (ENSMUSG00000010097) #25	Tmem223 (ENSMUSG00000117924) #26	Tmem179b (ENSMUSG00000118346) #27	Taf6l (ENSMUSG00000003680) #28	Polr2g (ENSMUSG00000071662) #29	Zbtb3 (ENSMUSG00000071661) #30	Ttc9c (ENSMUSG00000071660) #31	Hnrnpul2 (ENSMUSG00000071659) #32	Gng3 (ENSMUSG00000071658) #33	Bscl2 (ENSMUSG00000071657) #34	Lrrn4cl (ENSMUSG00000071656) #35	Ubxn1 (ENSMUSG00000071655) #36	Uqcc3 (ENSMUSG00000071654) #37
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.c.b #12	ENSGT00940000161239.c.a.a #15	ENSGT00940000161239.d #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Steppe mouse	MODERN SPECIES	2426											ENSMSIG00000031185 #16	Slc22a8 (ENSMSIG00000031186) #17	Slc22a6 (ENSMSIG00000031188) #18	Chrm1 (ENSMSIG00000031191) #20	Slc3a2 (ENSMSIG00000031194) #21	Wdr74 (ENSMSIG00000031207) #22	Tex54 (ENSMSIG00000031210) #23	ENSMSIG00000031211 #24	Nxf1 (ENSMSIG00000031212) #25	Tmem223 (ENSMSIG00000031214) #26	Tmem179b (ENSMSIG00000031215) #27	Taf6l (ENSMSIG00000031216) #28	Polr2g (ENSMSIG00000031217) #29	Zbtb3 (ENSMSIG00000031218) #30	Ttc9c (ENSMSIG00000031219) #31	Hnrnpul2 (ENSMSIG00000031220) #32	Gng3 (ENSMSIG00000031221) #33	Bscl2 (ENSMSIG00000031222) #34	Lrrn4cl (ENSMSIG00000031223) #35
spretus	MODERN SPECIES	10	Rcor2 (MGP_SPRETEiJ_G0023545)	Mark2 (MGP_SPRETEiJ_G0023546)	Spindoc (MGP_SPRETEiJ_G0023547)	Zfta (MGP_SPRETEiJ_G0023548)	Rtn3 (MGP_SPRETEiJ_G0023549)	Atl3 (MGP_SPRETEiJ_G0023550) #7	Plaat3 (MGP_SPRETEiJ_G0023551) #8	Lgals12 (MGP_SPRETEiJ_G0023552) #9	MGP_SPRETEiJ_G0023553 #10	Slc22a19 (MGP_SPRETEiJ_G0023554) #12	MGP_SPRETEiJ_G0023555 #15	Slc22a8 (MGP_SPRETEiJ_G0023557) #17	Slc22a6 (MGP_SPRETEiJ_G0023558) #18	Chrm1 (MGP_SPRETEiJ_G0023559) #20	Slc3a2 (MGP_SPRETEiJ_G0023560) #21	Wdr74 (MGP_SPRETEiJ_G0023561) #22	Tex54 (MGP_SPRETEiJ_G0023562) #23	Stx5a (MGP_SPRETEiJ_G0023563) #24	Taf6l (MGP_SPRETEiJ_G0023565) #28	Polr2g (MGP_SPRETEiJ_G0023566) #29	Zbtb3 (MGP_SPRETEiJ_G0023567) #30	Ttc9c (MGP_SPRETEiJ_G0023568) #31	Hnrnpul2 (MGP_SPRETEiJ_G0023569) #32	Gng3 (MGP_SPRETEiJ_G0023570) #33	Bscl2 (MGP_SPRETEiJ_G0023571) #34	Lrrn4cl (MGP_SPRETEiJ_G0023572) #35	Ubxn1 (MGP_SPRETEiJ_G0023573) #36	Uqcc3 (MGP_SPRETEiJ_G0023574) #37	MGP_SPRETEiJ_G0023575	1810009A15Rik (MGP_SPRETEiJ_G0023576)	Ints5 (MGP_SPRETEiJ_G0023577)
Ryukyu mouse	MODERN SPECIES	10	Cox8a (MGP_CAROLIEiJ_G0022633)	Naa40 (MGP_CAROLIEiJ_G0022634)	Rcor2 (MGP_CAROLIEiJ_G0022635)	Mark2 (MGP_CAROLIEiJ_G0022636)	Spindoc (MGP_CAROLIEiJ_G0022637)	Zfta (MGP_CAROLIEiJ_G0022638)	Rtn3 (MGP_CAROLIEiJ_G0022639)	Atl3 (MGP_CAROLIEiJ_G0022640) #7	Plaat3 (MGP_CAROLIEiJ_G0022641) #8	Lgals12 (MGP_CAROLIEiJ_G0022642) #9	MGP_CAROLIEiJ_G0022643 #10	Slc22a8 (MGP_CAROLIEiJ_G0022644) #17	Slc22a6 (MGP_CAROLIEiJ_G0022645) #18	Chrm1 (MGP_CAROLIEiJ_G0022646) #20	Slc3a2 (MGP_CAROLIEiJ_G0022647) #21	Wdr74 (MGP_CAROLIEiJ_G0022648) #22	Tex54 (MGP_CAROLIEiJ_G0022649) #23	Stx5a (MGP_CAROLIEiJ_G0022650) #24	Nxf1 (MGP_CAROLIEiJ_G0022651) #25	Tmem179b (MGP_CAROLIEiJ_G0022652) #27	Polr2g (MGP_CAROLIEiJ_G0022653) #29	Zbtb3 (MGP_CAROLIEiJ_G0022654) #30	Ttc9c (MGP_CAROLIEiJ_G0022655) #31	Hnrnpul2 (MGP_CAROLIEiJ_G0022656) #32	Gng3 (MGP_CAROLIEiJ_G0022657) #33	Bscl2 (MGP_CAROLIEiJ_G0022658) #34	Lrrn4cl (MGP_CAROLIEiJ_G0022659) #35	Ubxn1 (MGP_CAROLIEiJ_G0022660) #36	Uqcc3 (MGP_CAROLIEiJ_G0022661) #37	MGP_CAROLIEiJ_G0022662	MGP_CAROLIEiJ_G0022663
Shrew mouse	MODERN SPECIES		Naa40 (MGP_PahariEiJ_G0014128)	Rcor2 (MGP_PahariEiJ_G0014129)	Mark2 (MGP_PahariEiJ_G0014130)	Spindoc (MGP_PahariEiJ_G0014131)	Zfta (MGP_PahariEiJ_G0014132)	Rtn3 (MGP_PahariEiJ_G0014133)	Atl3 (MGP_PahariEiJ_G0014134) #7	Plaat3 (MGP_PahariEiJ_G0014135) #8	Lgals12 (MGP_PahariEiJ_G0014136) #9	MGP_PahariEiJ_G0014137 #10	MGP_PahariEiJ_G0014138 #16	Slc22a8 (MGP_PahariEiJ_G0014139) #17	Slc22a6 (MGP_PahariEiJ_G0014140) #18	Chrm1 (MGP_PahariEiJ_G0014141) #20	Slc3a2 (MGP_PahariEiJ_G0014142) #21	Wdr74 (MGP_PahariEiJ_G0014143) #22	Tex54 (MGP_PahariEiJ_G0014144) #23	MGP_PahariEiJ_G0014145 #24	Nxf1 (MGP_PahariEiJ_G0014146) #25	Taf6l (MGP_PahariEiJ_G0014147) #28	Polr2g (MGP_PahariEiJ_G0014148) #29	Zbtb3 (MGP_PahariEiJ_G0014149) #30	Ttc9c (MGP_PahariEiJ_G0014150) #31	Hnrnpul2 (MGP_PahariEiJ_G0014151) #32	Gng3 (MGP_PahariEiJ_G0014152) #33	Bscl2 (MGP_PahariEiJ_G0014153) #34	Lrrn4cl (MGP_PahariEiJ_G0014154) #35	Ubxn1 (MGP_PahariEiJ_G0014155) #36	Uqcc3 (MGP_PahariEiJ_G0014156) #37	Ints5 (MGP_PahariEiJ_G0014158)	Ganab (MGP_PahariEiJ_G0014159)
Rat	MODERN SPECIES		Atl3 (ENSRNOG00000021203) #7	ENSRNOG00000066743	Plaat3 (ENSRNOG00000021206) #8	Lgals12 (ENSRNOG00000021207) #9	Plaat5 (ENSRNOG00000023528) #10	Slc22a24 (ENSRNOG00000056396) #12	Dnajb6-ps10 (ENSRNOG00000017884)	UST4r (ENSRNOG00000049826) ##16	Ust5r (ENSRNOG00000061890) ##16	Slc22a25 (ENSRNOG00000017964) #16	Slc22a8 (ENSRNOG00000018086) #17	Slc22a6 (ENSRNOG00000018215) #18	Chrm1 (ENSRNOG00000018385) #20	Slc3a2 (ENSRNOG00000018487) #21	LOC690251 (ENSRNOG00000029315)	Wdr74 (ENSRNOG00000042878) #22	LOC120099984 (ENSRNOG00000063481) #23	Stx5 (ENSRNOG00000018847) #24	Nxf1 (ENSRNOG00000019069) #25	Tmem223 (ENSRNOG00000019266) #26	Tmem179b (ENSRNOG00000019341) #27	Taf6l (ENSRNOG00000019419) #28	Zbtb3 (ENSRNOG00000019461) #30	Polr2g (ENSRNOG00000019439) #29	Ttc9c (ENSRNOG00000019464) #31	Hnrnpul2 (ENSRNOG00000019507)	Gng3 (ENSRNOG00000019570) #33	Bscl2 (ENSRNOG00000052393) #34	Ubxn1 (ENSRNOG00000019666) #36	Uqcc3 (ENSRNOG00000045561) #37	Gm49403 (ENSRNOG00000064559)
Upper Galilee mountains blind mole rat	MODERN SPECIES	993											ENSNGAG00000006190 #15	Slc22a8 (ENSNGAG00000017037) #17	Slc22a6 (ENSNGAG00000017578) #18	Chrm1 (ENSNGAG00000002773) #20	ENSNGAG00000014580 #21	Wdr74 (ENSNGAG00000018778) #22	ENSNGAG00000017211 #24	ENSNGAG00000011098 #24	Nxf1 (ENSNGAG00000001539) #25	Tmem223 (ENSNGAG00000013203) #26	Tmem179b (ENSNGAG00000019915) #27	Taf6l (ENSNGAG00000020944) #28	Polr2g (ENSNGAG00000020624) #29	Zbtb3 (ENSNGAG00000004122) #30	Ttc9c (ENSNGAG00000010773) #31	Hnrnpul2 (ENSNGAG00000012005) #32	Gng3 (ENSNGAG00000017324) #33	Bscl2 (ENSNGAG00000001576) #34	Lrrn4cl (ENSNGAG00000019480) #35	Ubxn1 (ENSNGAG00000019771) #36	Uqcc3 (ENSNGAG00000012681) #37
Lesser Egyptian jerboa	MODERN SPECIES	60	Rcor2 (ENSJJAG00000000799)	Mark2 (ENSJJAG00000018612)	Spindoc (ENSJJAG00000014147)	Zfta (ENSJJAG00000019968)	ENSJJAG00000016262	ENSJJAG00000006253 #7	ENSJJAG00000017667	Plaat3 (ENSJJAG00000021915) #8	Lgals12 (ENSJJAG00000014881) #9	Plaat5 (ENSJJAG00000020253) #10	ENSJJAG00000010614 #16	Slc22a8 (ENSJJAG00000023072) #17	Slc22a6 (ENSJJAG00000009093) #18	Chrm1 (ENSJJAG00000013856) #20	ENSJJAG00000001125 #21	Wdr74 (ENSJJAG00000001449) #22	Stx5a (ENSJJAG00000023191) #24	Nxf1 (ENSJJAG00000017480) #25	Tmem223 (ENSJJAG00000020948) #26	Tmem179b (ENSJJAG00000010561) #27	Taf6l (ENSJJAG00000017255) #28	ENSJJAG00000009540	Polr2g (ENSJJAG00000005019) #29	Zbtb3 (ENSJJAG00000024243) #30	ENSJJAG00000008957 #31	Hnrnpul2 (ENSJJAG00000011206) #32	Gng3 (ENSJJAG00000015400) #33	ENSJJAG00000019301 #34	Ubxn1 (ENSJJAG00000012631) #36	Uqcc3 (ENSJJAG00000022865) #37	ENSJJAG00000011273
Kangaroo rat	MODERN SPECIES	436											Slc22a8 (ENSDORG00000014299) #17	Slc22a6 (ENSDORG00000008272) #18	Chrm1 (ENSDORG00000014333) #20	ENSDORG00000010523 #21	ENSDORG00000023609 #21	Wdr74 (ENSDORG00000030180) #22	ENSDORG00000026362	ENSDORG00000025630	Nxf1 (ENSDORG00000015692) #25	Tmem223 (ENSDORG00000015693) #26	ENSDORG00000029410 #27	ENSDORG00000015695 #28	ENSDORG00000015696 #29	Zbtb3 (ENSDORG00000015697) #30	Ttc9c (ENSDORG00000028105) #31	Hnrnpul2 (ENSDORG00000008678) #32	Gng3 (ENSDORG00000025670) #33	ENSDORG00000024721	Ubxn1 (ENSDORG00000009406) #36	Uqcc3 (ENSDORG00000025423) #37	1810009A15Rik (ENSDORG00000025730)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000164763	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Sciuridae	ANCESTRAL SPECIES	40							ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000164763	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c.d.b.b ##8	ENSGT00940000154853.c.c.a ##8	ENSGT00940000162878	ENSGT00940000154853.c.d.b.a.a ##8	ENSGT00940000162436 #10	ENSGT00940000164763.e	ENSGT00940000164763.f	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Marmotini_b	ANCESTRAL SPECIES	21												ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Arctic ground squirrel	MODERN SPECIES	366												SLC22A8 (ENSUPAG00010005520) #17	SLC22A6 (ENSUPAG00010005504) #18	CHRM1 (ENSUPAG00010005493) #20	SLC3A2 (ENSUPAG00010005472) #21	WDR74 (ENSUPAG00010005413) #22	ENSUPAG00010005405 #23	NXF1 (ENSUPAG00010005335) #25	TMEM223 (ENSUPAG00010005332) #26	TMEM179B (ENSUPAG00010005330) #27	TAF6L (ENSUPAG00010005260) #28	ENSUPAG00010005242 #29	ZBTB3 (ENSUPAG00010005239) #30	TTC9C (ENSUPAG00010005227) #31	HNRNPUL2 (ENSUPAG00010005211) #32	GNG3 (ENSUPAG00010005209) #33	BSCL2 (ENSUPAG00010005172) #34	LRRN4CL (ENSUPAG00010005167) #35	UBXN1 (ENSUPAG00010005156) #36	UQCC3 (ENSUPAG00010005149) #37	CSKMT (ENSUPAG00010005145)
Squirrel	MODERN SPECIES	181												SLC22A8 (ENSSTOG00000007893) #17	SLC22A6 (ENSSTOG00000007863) #18	CHRM1 (ENSSTOG00000004514) #20	ENSSTOG00000004495 #21	WDR74 (ENSSTOG00000028814) #22	ENSSTOG00000031064 #23	STX5 (ENSSTOG00000004487) #24	NXF1 (ENSSTOG00000004463) #25	TMEM179B (ENSSTOG00000004436) #27	TMEM223 (ENSSTOG00000004451) #26	TAF6L (ENSSTOG00000004406) #28	POLR2G (ENSSTOG00000004391) #29	ZBTB3 (ENSSTOG00000027839) #30	TTC9C (ENSSTOG00000004352) #31	HNRNPUL2 (ENSSTOG00000004327) #32	GNG3 (ENSSTOG00000001052) #33	BSCL2 (ENSSTOG00000024362) #34	LRRN4CL (ENSSTOG00000022001) #35	UBXN1 (ENSSTOG00000004310) #36	UQCC3 (ENSSTOG00000029463) #37
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000005778	ENSMMMG00000005768 #16	ENSMMMG00000004981	ENSMMMG00000004930 #16	ENSMMMG00000004924	ENSMMMG00000004907 #16	ENSMMMG00000004851 #16	ENSMMMG00000003825	ENSMMMG00000003776	ENSMMMG00000003769 #16	SLC22A8 (ENSMMMG00000003731) #17	SLC22A6 (ENSMMMG00000003706) #18	ENSMMMG00000003700 #19	CHRM1 (ENSMMMG00000003694) #20	SLC3A2 (ENSMMMG00000003678) #21	WDR74 (ENSMMMG00000003523) #22	STX5 (ENSMMMG00000003474) #24	NXF1 (ENSMMMG00000003452) #25	TMEM223 (ENSMMMG00000003447) #26	TMEM179B (ENSMMMG00000003438) #27	TAF6L (ENSMMMG00000003387) #28	POLR2G (ENSMMMG00000003372) #29	ZBTB3 (ENSMMMG00000003369) #30	TTC9C (ENSMMMG00000003362) #31	HNRNPUL2 (ENSMMMG00000002784) #32	GNG3 (ENSMMMG00000002755) #33	BSCL2 (ENSMMMG00000002687) #34	LRRN4CL (ENSMMMG00000002684) #35	UBXN1 (ENSMMMG00000002665) #36	UQCC3 (ENSMMMG00000002655) #37	CSKMT (ENSMMMG00000002643)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005023731	ENSSVLG00005023766 #16	ENSSVLG00005023808	ENSSVLG00005023863 #16	ENSSVLG00005024051 #16	ENSSVLG00005024076	ENSSVLG00005024264 #16	SLC22A24 (ENSSVLG00005024838)	ENSSVLG00005024877	ENSSVLG00005024903	SLC22A8 (ENSSVLG00005024944) #17	SLC22A6 (ENSSVLG00005024995) #18	ENSSVLG00005025007	CHRM1 (ENSSVLG00005025022) #20	SLC3A2 (ENSSVLG00005025047) #21	WDR74 (ENSSVLG00005004863) #22	STX5 (ENSSVLG00005004935) #24	NXF1 (ENSSVLG00005004975) #25	TMEM223 (ENSSVLG00005005000) #26	TMEM179B (ENSSVLG00005005020) #27	TAF6L (ENSSVLG00005005050) #28	POLR2G (ENSSVLG00005005070) #29	ZBTB3 (ENSSVLG00005005114) #30	TTC9C (ENSSVLG00005005141) #31	HNRNPUL2 (ENSSVLG00005005186) #32	BSCL2 (ENSSVLG00005005272) #34	GNG3 (ENSSVLG00005005306) #33	LRRN4CL (ENSSVLG00005005319) #35	UBXN1 (ENSSVLG00005005341) #36	UQCC3 (ENSSVLG00005005402) #37	CSKMT (ENSSVLG00005005417)
Hystricomorpha	ANCESTRAL SPECIES	37										ENSGT00940000162436 #10	ENSGT00940000161499 #9	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Hystricomorpha_a	ANCESTRAL SPECIES	44											ENSGT00940000161499 #9	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615
Hystricomorpha_b	ANCESTRAL SPECIES	80											ENSGT00940000161499 #9	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615
Long-tailed chinchilla	MODERN SPECIES	306											LGALS12 (ENSCLAG00000000294) #9	SLC22A8 (ENSCLAG00000000390) #17	SLC22A6 (ENSCLAG00000001057) #18	CHRM1 (ENSCLAG00000000446) #20	SLC3A2 (ENSCLAG00000000468) #21	WDR74 (ENSCLAG00000000627) #22	STX5 (ENSCLAG00000000665) #24	NXF1 (ENSCLAG00000001490) #25	TMEM223 (ENSCLAG00000000343) #26	TMEM179B (ENSCLAG00000000362) #27	TAF6L (ENSCLAG00000000112) #28	POLR2G (ENSCLAG00000000802) #29	ZBTB3 (ENSCLAG00000000861) #30	TTC9C (ENSCLAG00000000902) #31	HNRNPUL2 (ENSCLAG00000000417) #32	LRRN4CL (ENSCLAG00000000228) #35	GNG3 (ENSCLAG00000000268) #33	BSCL2 (ENSCLAG00000000105) #34	UQCC3 (ENSCLAG00000000136) #37	UBXN1 (ENSCLAG00000000144) #36	CSKMT (ENSCLAG00000000298)
Degu	MODERN SPECIES	320									ENSODEG00000002375	ENSODEG00000002413	LGALS12 (ENSODEG00000002489) #9	SLC22A8 (ENSODEG00000002518) #17	SLC22A6 (ENSODEG00000002780) #18	CHRM1 (ENSODEG00000018978) #20	SLC3A2 (ENSODEG00000003055) #21	WDR74 (ENSODEG00000003132) #22	STX5 (ENSODEG00000003162) #24	NXF1 (ENSODEG00000001620) #25	TMEM223 (ENSODEG00000001739) #26	TAF6L (ENSODEG00000001781) #28	ENSODEG00000018748	ENSODEG00000002048 #29	HNRNPUL2 (ENSODEG00000002142) #32	TTC9C (ENSODEG00000002308) #31	GNG3 (ENSODEG00000002315) #33	UBXN1 (ENSODEG00000002987) #36	UQCC3 (ENSODEG00000003020) #37	INTS5 (ENSODEG00000003038)	GANAB (ENSODEG00000003210)	B3GAT3 (ENSODEG00000003388)	ROM1 (ENSODEG00000003428)
Guinea pig	MODERN SPECIES	44	ENSCPOG00000038081	ENSCPOG00000040732	ENSCPOG00000030540	ENSCPOG00000024812	OR5AS1 (ENSCPOG00000002762)	ENSCPOG00000035549	ENSCPOG00000024576	ENSCPOG00000003501	ENSCPOG00000031316	ENSCPOG00000021873	LGALS12 (ENSCPOG00000001729) #9	SLC22A8 (ENSCPOG00000007880) #17	SLC22A6 (ENSCPOG00000015195) #18	CHRM1 (ENSCPOG00000000307) #20	SLC3A2 (ENSCPOG00000013152) #21	WDR74 (ENSCPOG00000008305) #22	STX5 (ENSCPOG00000030304) #24	NXF1 (ENSCPOG00000006126) #25	TMEM223 (ENSCPOG00000006124) #26	TMEM179B (ENSCPOG00000006121) #27	TAF6L (ENSCPOG00000002702) #28	POLR2G (ENSCPOG00000036420) #29	ZBTB3 (ENSCPOG00000011665) #30	TTC9C (ENSCPOG00000031200) #31	ENSCPOG00000000739	GNG3 (ENSCPOG00000040497) #33	LRRN4CL (ENSCPOG00000036188) #35	BSCL2 (ENSCPOG00000021949) #34	UBXN1 (ENSCPOG00000004750) #36	UQCC3 (ENSCPOG00000035939) #37	CSKMT (ENSCPOG00000027504)
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000006909	ENSHGLG00000037048	KBTBD4 (ENSHGLG00000047234)	NDUFS3 (ENSHGLG00000018368)	FAM180B (ENSHGLG00000038229)	MTCH2 (ENSHGLG00000017536)	ENSHGLG00000043784	ENSHGLG00000008506	ENSHGLG00000039374	ENSHGLG00000041936 #10	ENSHGLG00000003580 #9	ENSHGLG00000003320 #17	SLC22A6 (ENSHGLG00000003133) #18	CHRM1 (ENSHGLG00000040030) #20	SLC3A2 (ENSHGLG00000004557) #21	WDR74 (ENSHGLG00000003751) #22	STX5 (ENSHGLG00000003553) #24	NXF1 (ENSHGLG00000002936) #25	TMEM223 (ENSHGLG00000034690) #26	TAF6L (ENSHGLG00000005590) #28	POLR2G (ENSHGLG00000004851) #29	ZBTB3 (ENSHGLG00000032180) #30	ENSHGLG00000038212	HNRNPUL2 (ENSHGLG00000003285) #32	GNG3 (ENSHGLG00000038630) #33	BSCL2 (ENSHGLG00000002887) #34	ENSHGLG00000038756 #35	UBXN1 (ENSHGLG00000002960) #36	METTL12 (ENSHGLG00000044833)	ENSHGLG00000002601	INTS5 (ENSHGLG00000039217)
Lagomorpha	ANCESTRAL SPECIES	161	ENSGT00940000155031	ENSGT00410000025985	ENSGT00940000175551	ENSGT00980000200147	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162660.b.f	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.b #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000156646 #21	ENSGT00390000015119 #22
Pika	MODERN SPECIES	4087																ENSOPRG00000002393 #22	ENSOPRG00000002369	NXF1 (ENSOPRG00000002332) #25	TMEM223 (ENSOPRG00000002308) #26	TMEM179B (ENSOPRG00000002288) #27
Rabbit	MODERN SPECIES	450	PLAAT2 (ENSOCUG00000026233) ##8	LGALS12 (ENSOCUG00000010300) #9	ENSOCUG00000036699	PLAAT5 (ENSOCUG00000010294) #10	ENSOCUG00000025543 #16	ENSOCUG00000012507 #16	ENSOCUG00000012529 #16	ENSOCUG00000014725	ENSOCUG00000039162	ENSOCUG00000031453	ENSOCUG00000017746	ENSOCUG00000031282	ENSOCUG00000021785	SLC22A6 (ENSOCUG00000024091) #18	SLC3A2 (ENSOCUG00000001334) #21	WDR74 (ENSOCUG00000022086) #22	NXF1 (ENSOCUG00000009503) #25	TMEM223 (ENSOCUG00000009501) #26	TMEM179B (ENSOCUG00000027739) #27	TAF6L (ENSOCUG00000009491) #28	POLR2G (ENSOCUG00000009485) #29	ZBTB3 (ENSOCUG00000008921) #30	TTC9C (ENSOCUG00000009479) #31	HNRNPUL2 (ENSOCUG00000009474) #32	GNG3 (ENSOCUG00000009468) #33	BSCL2 (ENSOCUG00000026008) #34	UBXN1 (ENSOCUG00000017278) #36	UQCC3 (ENSOCUG00000017252) #37	LBHD1 (ENSOCUG00000017260)	CSKMT (ENSOCUG00000024025)	INTS5 (ENSOCUG00000017276)
Tree shrew	MODERN SPECIES	2977															SLC3A2 (ENSTBEG00000014527) #21	WDR74 (ENSTBEG00000014321) #22	STX5 (ENSTBEG00000014090) #24	NXF1 (ENSTBEG00000013651) #25	ENSTBEG00000013515 #26	TMEM179B (ENSTBEG00000013246) #27	TAF6L (ENSTBEG00000012754) #28
Primates	ANCESTRAL SPECIES		ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Vervet Monkey	MODERN SPECIES		RCOR2 (ENSCSAG00000006881)	MARK2 (ENSCSAG00000006877)	SPINDOC (ENSCSAG00000006870)	ZFTA (ENSCSAG00000006866)	ENSCSAG00000006861	ATL3 (ENSCSAG00000006859) #7	PLAAT3 (ENSCSAG00000006852) #8	PLAAT2 (ENSCSAG00000006843) ##8	PLAAT4 (ENSCSAG00000006839)	LGALS12 (ENSCSAG00000006834) #9	PLAAT5 (ENSCSAG00000006826) #10	SLC22A8 (ENSCSAG00000006811) #17	SLC22A6 (ENSCSAG00000006803) #18	CHRM1 (ENSCSAG00000019175) #20	SLC3A2 (ENSCSAG00000006769) #21	WDR74 (ENSCSAG00000006751) #22	STX5 (ENSCSAG00000006748) #24	NXF1 (ENSCSAG00000006739) #25	TMEM223 (ENSCSAG00000006730) #26	TMEM179B (ENSCSAG00000006726) #27	TAF6L (ENSCSAG00000006720) #28	POLR2G (ENSCSAG00000006715) #29	ZBTB3 (ENSCSAG00000006712) #30	TTC9C (ENSCSAG00000006708) #31	HNRNPUL2 (ENSCSAG00000006701) #32	GNG3 (ENSCSAG00000006696) #33	BSCL2 (ENSCSAG00000006684) #34	LRRN4CL (ENSCSAG00000019176) #35	UBXN1 (ENSCSAG00000006659) #36	UQCC3 (ENSCSAG00000006653) #37	CSKMT (ENSCSAG00000006647)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000163505.a.a.a.b.a.b.b.b.a.a	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00960000190678	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.b.b	ENSGT00510000049875
Rhesus	MODERN SPECIES	5	MARK2 (ENSMMUG00000014131)	ENSMMUG00000059969	SPINDOC (ENSMMUG00000018152)	ZFTA (ENSMMUG00000047347)	RTN3 (ENSMMUG00000015876)	ATL3 (ENSMMUG00000005776) #7	PLAAT3 (ENSMMUG00000005775) ##8	PLAAT4 (ENSMMUG00000045105)	LGALS12 (ENSMMUG00000018304) #9	PLAAT5 (ENSMMUG00000018316) #10	SLC22A8 (ENSMMUG00000016225) #17	SLC22A6 (ENSMMUG00000016227) #18	CHRM1 (ENSMMUG00000017292) #20	SLC3A2 (ENSMMUG00000020354) #21	ENSMMUG00000064232	WDR74 (ENSMMUG00000018779) #22	STX5 (ENSMMUG00000005280) #24	NXF1 (ENSMMUG00000000188) #25	TMEM223 (ENSMMUG00000023094) #26	TMEM179B (ENSMMUG00000003682) #27	TAF6L (ENSMMUG00000000110) #28	POLR2G (ENSMMUG00000014368) #29	ZBTB3 (ENSMMUG00000056054) #30	TTC9C (ENSMMUG00000039671) #31	HNRNPUL2 (ENSMMUG00000051635) #32	BSCL2 (ENSMMUG00000014363) #34	GNG3 (ENSMMUG00000042036) #33	LRRN4CL (ENSMMUG00000031129) #35	UBXN1 (ENSMMUG00000005761) #36	ENSMMUG00000059843	CSKMT (ENSMMUG00000046328)
Crab-eating macaque	MODERN SPECIES	5	SPINDOC (ENSMFAG00000002160)	ENSMFAG00000059182	RTN3 (ENSMFAG00000030265)	ATL3 (ENSMFAG00000035680) #7	ENSMFAG00000053940	PLAAT3 (ENSMFAG00000032359) #8	PLAAT4 (ENSMFAG00000035178)	LGALS12 (ENSMFAG00000041888) #9	PLAAT5 (ENSMFAG00000039225) #10	SLC22A8 (ENSMFAG00000030409) #17	SLC22A6 (ENSMFAG00000003484) #18	ENSMFAG00000048955	ENSMFAG00000028626 #19	SLC3A2 (ENSMFAG00000032262) #21	ENSMFAG00000055662	WDR74 (ENSMFAG00000034162) #22	STX5 (ENSMFAG00000003488) #24	NXF1 (ENSMFAG00000045399) #25	TMEM223 (ENSMFAG00000030143) #26	TMEM179B (ENSMFAG00000037362) #27	TAF6L (ENSMFAG00000030912) #28	POLR2G (ENSMFAG00000033674) #29	ZBTB3 (ENSMFAG00000003520) #30	TTC9C (ENSMFAG00000036997) #31	HNRNPUL2 (ENSMFAG00000041014) #32	ENSMFAG00000039354 #33	BSCL2 (ENSMFAG00000031001) #34	LRRN4CL (ENSMFAG00000049892) #35	UBXN1 (ENSMFAG00000045415) #36	ENSMFAG00000051023	ENSMFAG00000061333
Pig-tailed macaque	MODERN SPECIES	433	ZFTA (ENSMNEG00000044610)	RTN3 (ENSMNEG00000044489)	ENSMNEG00000033797	ATL3 (ENSMNEG00000034634) #7	PLAAT3 (ENSMNEG00000039570) #8	PLAAT2 (ENSMNEG00000038914) ##8	PLAAT4 (ENSMNEG00000045290)	LGALS12 (ENSMNEG00000040245) #9	PLAAT5 (ENSMNEG00000034274) #10	SLC22A8 (ENSMNEG00000038818) #17	SLC22A6 (ENSMNEG00000043253) #18	ENSMNEG00000025380 #19	CHRM1 (ENSMNEG00000010440) #20	SLC3A2 (ENSMNEG00000044452) #21	TEX54 (ENSMNEG00000032932) #23	WDR74 (ENSMNEG00000042608) #22	STX5 (ENSMNEG00000041981) #24	NXF1 (ENSMNEG00000034667) #25	TMEM223 (ENSMNEG00000030390) #26	TMEM179B (ENSMNEG00000000022) #27	TAF6L (ENSMNEG00000031769) #28	POLR2G (ENSMNEG00000041523) #29	ZBTB3 (ENSMNEG00000032222) #30	TTC9C (ENSMNEG00000038138) #31	HNRNPUL2 (ENSMNEG00000036955) #32	GNG3 (ENSMNEG00000041074) #33	BSCL2 (ENSMNEG00000027955) #34	LRRN4CL (ENSMNEG00000008801) #35	UBXN1 (ENSMNEG00000023355) #36	UQCC3 (ENSMNEG00000009079) #37	CSKMT (ENSMNEG00000032750)
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Olive baboon	MODERN SPECIES	3	RCOR2 (ENSPANG00000007283)	MARK2 (ENSPANG00000026211)	SPINDOC (ENSPANG00000043963)	ENSPANG00000045988	RTN3 (ENSPANG00000004686)	ATL3 (ENSPANG00000025889) #7	PLAAT3 (ENSPANG00000032107) #8	PLAAT2 (ENSPANG00000005852) ##8	PLAAT4 (ENSPANG00000045447)	LGALS12 (ENSPANG00000012182) #9	PLAAT5 (ENSPANG00000015204) #10	SLC22A8 (ENSPANG00000017441) #17	SLC22A6 (ENSPANG00000013726) #18	CHRM1 (ENSPANG00000021843) #20	SLC3A2 (ENSPANG00000012315) #21	WDR74 (ENSPANG00000013148) #22	STX5 (ENSPANG00000019343) #24	NXF1 (ENSPANG00000012132) #25	TMEM223 (ENSPANG00000012314) #26	TMEM179B (ENSPANG00000021117) #27	TAF6L (ENSPANG00000013647) #28	POLR2G (ENSPANG00000037490) #29	ZBTB3 (ENSPANG00000008469) #30	TTC9C (ENSPANG00000039235) #31	HNRNPUL2 (ENSPANG00000023745) #32	GNG3 (ENSPANG00000042558) #33	BSCL2 (ENSPANG00000011406) #34	LRRN4CL (ENSPANG00000003479) #35	UBXN1 (ENSPANG00000005453) #36	UQCC3 (ENSPANG00000035430) #37	CSKMT (ENSPANG00000046328)
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00550000075025.`b.b.b	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Drill	MODERN SPECIES	1111	SPINDOC (ENSMLEG00000042638)	ZFTA (ENSMLEG00000038685)	RTN3 (ENSMLEG00000009760)	ENSMLEG00000004674	ATL3 (ENSMLEG00000040413) #7	PLAAT3 (ENSMLEG00000036330) #8	PLAAT2 (ENSMLEG00000034362) ##8	PLAAT4 (ENSMLEG00000043996)	LGALS12 (ENSMLEG00000041910) #9	PLAAT5 (ENSMLEG00000040885) #10	SLC22A8 (ENSMLEG00000044339) #17	SLC22A6 (ENSMLEG00000031737) #18	ENSMLEG00000022707 #19	CHRM1 (ENSMLEG00000023394) #20	SLC3A2 (ENSMLEG00000042574) #21	WDR74 (ENSMLEG00000032669) #22	TEX54 (ENSMLEG00000030108) #23	STX5 (ENSMLEG00000042667) #24	TMEM223 (ENSMLEG00000029784) #26	NXF1 (ENSMLEG00000026574) #25	TMEM179B (ENSMLEG00000039000) #27	TAF6L (ENSMLEG00000032444) #28	POLR2G (ENSMLEG00000032928) #29	ZBTB3 (ENSMLEG00000042521) #30	TTC9C (ENSMLEG00000036250) #31	HNRNPUL2 (ENSMLEG00000033906) #32	GNG3 (ENSMLEG00000039091) #33	BSCL2 (ENSMLEG00000037535) #34	LRRN4CL (ENSMLEG00000006668) #35	UBXN1 (ENSMLEG00000027508) #36	UQCC3 (ENSMLEG00000042115) #37
Sooty mangabey	MODERN SPECIES	518	MARK2 (ENSCATG00000030205)	SPINDOC (ENSCATG00000043222)	ZFTA (ENSCATG00000038355)	RTN3 (ENSCATG00000038469)	ATL3 (ENSCATG00000034537) #7	PLAAT3 (ENSCATG00000039316) #8	PLAAT2 (ENSCATG00000043587) ##8	PLAAT4 (ENSCATG00000042576)	LGALS12 (ENSCATG00000038681) #9	PLAAT5 (ENSCATG00000035197) #10	SLC22A8 (ENSCATG00000034455) #17	SLC22A6 (ENSCATG00000033614) #18	ENSCATG00000005005 #19	CHRM1 (ENSCATG00000004775) #20	SLC3A2 (ENSCATG00000043727) #21	WDR74 (ENSCATG00000035035) #22	TEX54 (ENSCATG00000044482) #23	STX5 (ENSCATG00000033087) #24	NXF1 (ENSCATG00000044025) #25	TMEM223 (ENSCATG00000034294) #26	TMEM179B (ENSCATG00000036661) #27	TAF6L (ENSCATG00000031925) #28	POLR2G (ENSCATG00000034443) #29	ZBTB3 (ENSCATG00000034435) #30	TTC9C (ENSCATG00000035217) #31	HNRNPUL2 (ENSCATG00000034588) #32	BSCL2 (ENSCATG00000037983) #34	GNG3 (ENSCATG00000038843) #33	LRRN4CL (ENSCATG00000003551) #35	UBXN1 (ENSCATG00000036706) #36	UQCC3 (ENSCATG00000015726) #37
Rhinopithecus	ANCESTRAL SPECIES	15																ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.e.b #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Black snub-nosed monkey	MODERN SPECIES	600																WDR74 (ENSRBIG00000037705) #22	TEX54 (ENSRBIG00000040059) #23	STX5 (ENSRBIG00000029164) #24	NXF1 (ENSRBIG00000042508) #25	TMEM223 (ENSRBIG00000040267) #26	TMEM179B (ENSRBIG00000036204) #27	TAF6L (ENSRBIG00000036681) #28	ENSRBIG00000030312	POLR2G (ENSRBIG00000009173) #29	ZBTB3 (ENSRBIG00000036228) #30	TTC9C (ENSRBIG00000044503) #31	HNRNPUL2 (ENSRBIG00000037820) #32	BSCL2 (ENSRBIG00000040625) #34	ENSRBIG00000036927 #33	UBXN1 (ENSRBIG00000028404) #36	UQCC3 (ENSRBIG00000038515) #37
Golden snub-nosed monkey	MODERN SPECIES	2511																WDR74 (ENSRROG00000024687) #22	TEX54 (ENSRROG00000031556) #23	STX5 (ENSRROG00000029680) #24	NXF1 (ENSRROG00000044145) #25	TMEM223 (ENSRROG00000034260) #26	TMEM179B (ENSRROG00000001174) #27	TAF6L (ENSRROG00000000495) #28	POLR2G (ENSRROG00000033543) #29	ZBTB3 (ENSRROG00000038933) #30	TTC9C (ENSRROG00000035353) #31	HNRNPUL2 (ENSRROG00000036561) #32	BSCL2 (ENSRROG00000036969) #34	GNG3 (ENSRROG00000037172) #33	UBXN1 (ENSRROG00000040915) #36	UQCC3 (ENSRROG00000007192) #37	CSKMT (ENSRROG00000027675)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Pan	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Chimpanzee	MODERN SPECIES	2	ATL3 (ENSPTRG00000003807) #7	PLAAT3 (ENSPTRG00000003806) #8	PLAAT2 (ENSPTRG00000003805) ##8	PLAAT4 (ENSPTRG00000003804)	LGALS12 (ENSPTRG00000003803) #9	PLAAT5 (ENSPTRG00000003801) #10	SLC22A9 (ENSPTRG00000003800) #16	SLC22A10 (ENSPTRG00000003799)	SLC22A25 (ENSPTRG00000024251)	SLC22A24 (ENSPTRG00000003797)	SLC22A8 (ENSPTRG00000003796) #17	SLC22A6 (ENSPTRG00000023694) #18	ENSPTRG00000046841 #19	CHRM1 (ENSPTRG00000003795) #20	SLC3A2 (ENSPTRG00000003794) #21	WDR74 (ENSPTRG00000047249) #22	STX5 (ENSPTRG00000003792) #24	ENSPTRG00000051335	NXF1 (ENSPTRG00000003791) #25	TMEM223 (ENSPTRG00000003790) #26	TMEM179B (ENSPTRG00000003789) #27	TAF6L (ENSPTRG00000003787) #28	ENSPTRG00000050327	ZBTB3 (ENSPTRG00000003785) #30	TTC9C (ENSPTRG00000023824) #31	HNRNPUL2 (ENSPTRG00000034359) #32	GNG3 (ENSPTRG00000003783) #33	BSCL2 (ENSPTRG00000003784) #34	UBXN1 (ENSPTRG00000003780) #36	UQCC3 (ENSPTRG00000028607) #37	CSKMT (ENSPTRG00000034411)
Bonobo	MODERN SPECIES	2	PLAAT3 (ENSPPAG00000038739) #8	PLAAT2 (ENSPPAG00000034354) ##8	PLAAT4 (ENSPPAG00000033745)	LGALS12 (ENSPPAG00000042349) #9	PLAAT5 (ENSPPAG00000040450) #10	SLC22A9 (ENSPPAG00000029821) #16	SLC22A10 (ENSPPAG00000040455)	SLC22A25 (ENSPPAG00000039130)	ENSPPAG00000042818	SLC22A24 (ENSPPAG00000035098)	SLC22A8 (ENSPPAG00000041453) #17	SLC22A6 (ENSPPAG00000035836) #18	ENSPPAG00000024710 #19	CHRM1 (ENSPPAG00000018668) #20	SLC3A2 (ENSPPAG00000020658) #21	WDR74 (ENSPPAG00000036028) #22	TEX54 (ENSPPAG00000012450) #23	STX5 (ENSPPAG00000039956) #24	NXF1 (ENSPPAG00000041498) #25	TMEM179B (ENSPPAG00000038907) #27	TMEM223 (ENSPPAG00000035801) #26	TAF6L (ENSPPAG00000009707) #28	POLR2G (ENSPPAG00000039868) #29	ZBTB3 (ENSPPAG00000031673) #30	TTC9C (ENSPPAG00000030010) #31	ENSPPAG00000041471	GNG3 (ENSPPAG00000032105) #33	BSCL2 (ENSPPAG00000042902) #34	UBXN1 (ENSPPAG00000036691) #36	ENSPPAG00000012147 #37	CSKMT (ENSPPAG00000029192)
Human	MODERN SPECIES	2	RTN3 (ENSG00000133318)	ATL3 (ENSG00000184743) #7	PLAAT3 (ENSG00000176485) #8	PLAAT2 (ENSG00000133328) ##8	PLAAT4 (ENSG00000133321)	LGALS12 (ENSG00000133317) #9	PLAAT5 (ENSG00000168004) #10	SLC22A9 (ENSG00000149742) #16	SLC22A10 (ENSG00000184999)	SLC22A25 (ENSG00000196600)	SLC22A24 (ENSG00000197658)	SLC22A8 (ENSG00000149452) #17	SLC22A6 (ENSG00000197901) #18	CHRM1 (ENSG00000168539) #20	SLC3A2 (ENSG00000168003) #21	WDR74 (ENSG00000133316) #22	TEX54 (ENSG00000283268) #23	STX5 (ENSG00000162236) #24	NXF1 (ENSG00000162231) #25	TMEM179B (ENSG00000185475) #27	TMEM223 (ENSG00000168569) #26	TAF6L (ENSG00000162227) #28	POLR2G (ENSG00000168002) #29	ZBTB3 (ENSG00000185670) #30	TTC9C (ENSG00000162222) #31	HNRNPUL2 (ENSG00000214753) #32	GNG3 (ENSG00000162188) #33	BSCL2 (ENSG00000168000) #34	LRRN4CL (ENSG00000177363) #35	UBXN1 (ENSG00000162191) #36	UQCC3 (ENSG00000204922) #37
Gorilla	MODERN SPECIES	2	PLAAT3 (ENSGGOG00000001944) #8	PLAAT2 (ENSGGOG00000000282) ##8	PLAAT4 (ENSGGOG00000000281)	LGALS12 (ENSGGOG00000000279) #9	PLAAT5 (ENSGGOG00000000970) #10	SLC22A9 (ENSGGOG00000003608) #16	SLC22A10 (ENSGGOG00000014919)	CSNK1G2 (ENSGGOG00000007714)	SLC22A25 (ENSGGOG00000007793)	SLC22A24 (ENSGGOG00000005570)	SLC22A8 (ENSGGOG00000003920) #17	SLC22A6 (ENSGGOG00000003915) #18	ENSGGOG00000036955 #19	CHRM1 (ENSGGOG00000016344) #20	SLC3A2 (ENSGGOG00000011233) #21	WDR74 (ENSGGOG00000001923) #22	TEX54 (ENSGGOG00000037357) #23	STX5 (ENSGGOG00000001919) #24	ENSGGOG00000040653	NXF1 (ENSGGOG00000001911) #25	TMEM223 (ENSGGOG00000001910) #26	TMEM179B (ENSGGOG00000001907) #27	TAF6L (ENSGGOG00000011807) #28	POLR2G (ENSGGOG00000011739) #29	ZBTB3 (ENSGGOG00000011735) #30	TTC9C (ENSGGOG00000011733) #31	HNRNPUL2 (ENSGGOG00000011722) #32	GNG3 (ENSGGOG00000003199) #33	BSCL2 (ENSGGOG00000003195) #34	UBXN1 (ENSGGOG00000005047) #36	ENSGGOG00000027467 #37
Orangutan	MODERN SPECIES	2	RTN3 (ENSPPYG00000003128)	ATL3 (ENSPPYG00000003129) #7	PLAAT3 (ENSPPYG00000031710) #8	PLAAT2 (ENSPPYG00000003130) ##8	ENSPPYG00000003131	LGALS12 (ENSPPYG00000003132) #9	PLAAT5 (ENSPPYG00000003133) #10	SLC22A9 (ENSPPYG00000003134) #16	SLC22A10 (ENSPPYG00000038210)	SLC22A25 (ENSPPYG00000003135)	SLC22A24 (ENSPPYG00000003136)	SLC22A8 (ENSPPYG00000003137) #17	SLC22A6 (ENSPPYG00000003138) #18	CHRM1 (ENSPPYG00000003139) #20	SLC3A2 (ENSPPYG00000003140) #21	WDR74 (ENSPPYG00000003141) #22	TEX54 (ENSPPYG00000034365) #23	STX5 (ENSPPYG00000003142) #24	NXF1 (ENSPPYG00000003143) #25	TMEM223 (ENSPPYG00000003144) #26	TMEM179B (ENSPPYG00000003145) #27	TAF6L (ENSPPYG00000003146) #28	ENSPPYG00000003147 #29	ZBTB3 (ENSPPYG00000003148) #30	TTC9C (ENSPPYG00000030629) #31	HNRNPUL2 (ENSPPYG00000029773) #32	GNG3 (ENSPPYG00000003150) #33	BSCL2 (ENSPPYG00000038932) #34	LRRN4CL (ENSPPYG00000003152) #35	UBXN1 (ENSPPYG00000003153) #36	ENSPPYG00000003154 #37
Gibbon	MODERN SPECIES	19	ENSNLEG00000030866	ENSNLEG00000004565 #7	PLAAT3 (ENSNLEG00000004552) #8	PLAAT2 (ENSNLEG00000004549) ##8	ENSNLEG00000035013	LGALS12 (ENSNLEG00000004499) #9	PLAAT5 (ENSNLEG00000004486) #10	SLC22A10 (ENSNLEG00000004483)	SLC22A25 (ENSNLEG00000004474)	SLC22A24 (ENSNLEG00000034554)	SLC22A8 (ENSNLEG00000004442) #17	SLC22A6 (ENSNLEG00000004394) #18	ENSNLEG00000035187 #19	CHRM1 (ENSNLEG00000035083) #20	SLC3A2 (ENSNLEG00000004298) #21	WDR74 (ENSNLEG00000004238) #22	STX5 (ENSNLEG00000004184) #24	ENSNLEG00000035784	ENSNLEG00000004123 #25	TMEM223 (ENSNLEG00000004119) #26	TMEM179B (ENSNLEG00000036102) #27	TAF6L (ENSNLEG00000032645) #28	ENSNLEG00000004097 #29	ZBTB3 (ENSNLEG00000031633) #30	ENSNLEG00000034047 #31	HNRNPUL2 (ENSNLEG00000004077) #32	GNG3 (ENSNLEG00000004072) #33	BSCL2 (ENSNLEG00000004058) #34	LRRN4CL (ENSNLEG00000004054) #35	UBXN1 (ENSNLEG00000004041) #36	UQCC3 (ENSNLEG00000035136) #37
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Cebidae	ANCESTRAL SPECIES		ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646.e.a #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975.i.b #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	2	RTN3 (ENSCJAG00000018422)	ATL3 (ENSCJAG00000018444) #7	ENSCJAG00000033686	PLAAT3 (ENSCJAG00000018470) #8	PLAAT2 (ENSCJAG00000018481) ##8	PLAAT4 (ENSCJAG00000018491)	LGALS12 (ENSCJAG00000018504) #9	PLAAT5 (ENSCJAG00000038446) #10	SLC22A10 (ENSCJAG00000018512)	ENSCJAG00000043818	SLC22A8 (ENSCJAG00000046805) #17	SLC22A6 (ENSCJAG00000018534) #18	ENSCJAG00000080197	CHRM1 (ENSCJAG00000018561) #20	ENSCJAG00000018569 #21	ENSCJAG00000018581 #22	TEX54 (ENSCJAG00000047769) #23	STX5 (ENSCJAG00000018606) #24	NXF1 (ENSCJAG00000018635) #25	TMEM223 (ENSCJAG00000018681) #26	TMEM179B (ENSCJAG00000018683) #27	TAF6L (ENSCJAG00000040347) #28	ENSCJAG00000018688 #29	ZBTB3 (ENSCJAG00000018693) #30	TTC9C (ENSCJAG00000018703) #31	HNRNPUL2 (ENSCJAG00000018709) #32	GNG3 (ENSCJAG00000069907) #33	BSCL2 (ENSCJAG00000018730) #34	LRRN4CL (ENSCJAG00000047970) #35	UBXN1 (ENSCJAG00000018751) #36	UQCC3 (ENSCJAG00000082326) #37
Marmoset	MODERN SPECIES		ENSCJAG00000052430	ENSCJAG00000081668	TDRD3 (ENSCJAG00000003853)	ENSCJAG00000076988	PCDH20 (ENSCJAG00000016415)	ENSCJAG00000075877	ENSCJAG00000085595	ENSCJAG00000078229	ENSCJAG00000078739	PCDH9 (ENSCJAG00000016402)	ENSCJAG00000062136	ENSCJAG00000075923	ENSCJAG00000021951	ENSCJAG00000079366	KLHL1 (ENSCJAG00000016532)	ENSCJAG00000081793 #22	ENSCJAG00000070122	DACH1 (ENSCJAG00000021093)	ENSCJAG00000077790	ENSCJAG00000070126	ENSCJAG00000021107	MZT1 (ENSCJAG00000079180)	BORA (ENSCJAG00000021112)	DIS3 (ENSCJAG00000021117)	ENSCJAG00000074439	PIBF1 (ENSCJAG00000021133)	KLF5 (ENSCJAG00000021146)	KLF12 (ENSCJAG00000021151)	ENSCJAG00000079669	ENSCJAG00000054156	TBC1D4 (ENSCJAG00000021156)
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646.e.a #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00910000147729	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975.i.a #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Bolivian squirrel monkey	MODERN SPECIES	42	RTN3 (ENSSBOG00000033351)	ATL3 (ENSSBOG00000000876) #7	PLAAT3 (ENSSBOG00000018544) #8	PLAAT2 (ENSSBOG00000004535) ##8	PLAAT4 (ENSSBOG00000022541)	LGALS12 (ENSSBOG00000022059) #9	PLAAT5 (ENSSBOG00000018115) #10	SLC22A9 (ENSSBOG00000030304) #16	SLC22A10 (ENSSBOG00000019055)	SLC22A25 (ENSSBOG00000026216)	SLC22A8 (ENSSBOG00000018591) #17	SLC22A6 (ENSSBOG00000016011) #18	ENSSBOG00000018203 #19	CHRM1 (ENSSBOG00000021747) #20	SLC3A2 (ENSSBOG00000019428) #21	WDR74 (ENSSBOG00000030887) #22	STX5 (ENSSBOG00000018874) #24	ENSSBOG00000029029	NXF1 (ENSSBOG00000019587) #25	TMEM223 (ENSSBOG00000034790) #26	TMEM179B (ENSSBOG00000030503) #27	TAF6L (ENSSBOG00000030560) #28	POLR2G (ENSSBOG00000015220) #29	ZBTB3 (ENSSBOG00000032000) #30	TTC9C (ENSSBOG00000023530) #31	HNRNPUL2 (ENSSBOG00000026780) #32	GNG3 (ENSSBOG00000015839) #33	BSCL2 (ENSSBOG00000017621) #34	ENSSBOG00000035227 #36	UQCC3 (ENSSBOG00000032621) #37	CSKMT (ENSSBOG00000030424)
Capuchin	MODERN SPECIES	316											SLC22A8 (ENSCCAG00000037209) #17	SLC22A6 (ENSCCAG00000029767) #18	ENSCCAG00000018405 #19	CHRM1 (ENSCCAG00000006069) #20	SLC3A2 (ENSCCAG00000028057) #21	WDR74 (ENSCCAG00000020060) #22	STX5 (ENSCCAG00000013514) #24	NXF1 (ENSCCAG00000030567) #25	TMEM223 (ENSCCAG00000009078) #26	TMEM179B (ENSCCAG00000028319) #27	TAF6L (ENSCCAG00000036664) #28	ENSCCAG00000027746	ZBTB3 (ENSCCAG00000021977) #30	ENSCCAG00000022329	HNRNPUL2 (ENSCCAG00000037674) #32	BSCL2 (ENSCCAG00000026340) #34	GNG3 (ENSCCAG00000030017) #33	UBXN1 (ENSCCAG00000020847) #36	UQCC3 (ENSCCAG00000030092) #37	LBHD1 (ENSCCAG00000025856)	ENSCCAG00000037825
Mas night monkey	MODERN SPECIES	336											SLC22A8 (ENSANAG00000023797) #17	SLC22A6 (ENSANAG00000033554) #18	ENSANAG00000020205 #19	CHRM1 (ENSANAG00000020194) #20	SLC3A2 (ENSANAG00000037370) #21	WDR74 (ENSANAG00000031747) #22	STX5 (ENSANAG00000028924) #24	NXF1 (ENSANAG00000024600) #25	TMEM223 (ENSANAG00000037673) #26	TMEM179B (ENSANAG00000036828) #27	TAF6L (ENSANAG00000037691) #28	POLR2G (ENSANAG00000037428) #29	ZBTB3 (ENSANAG00000026704) #30	TTC9C (ENSANAG00000030687) #31	HNRNPUL2 (ENSANAG00000027153) #32	GNG3 (ENSANAG00000028934) #33	ENSANAG00000037042 #34	UBXN1 (ENSANAG00000027543) #36	UQCC3 (ENSANAG00000035176) #37	CSKMT (ENSANAG00000028032)	LBHD1 (ENSANAG00000036011)
Tarsier	MODERN SPECIES	3315													ENSTSYG00000026072 #19	CHRM1 (ENSTSYG00000011373) #20	SLC3A2 (ENSTSYG00000028956) #21	WDR74 (ENSTSYG00000032066) #22	STX5 (ENSTSYG00000010903) #24	NXF1 (ENSTSYG00000027468) #25	TMEM223 (ENSTSYG00000032236) #26	TMEM179B (ENSTSYG00000031386) #27	TAF6L (ENSTSYG00000034864) #28	POLR2G (ENSTSYG00000011918) #29	ZBTB3 (ENSTSYG00000031557) #30	TTC9C (ENSTSYG00000035368) #31	HNRNPUL2 (ENSTSYG00000003551) #32	GNG3 (ENSTSYG00000028232) #33	BSCL2 (ENSTSYG00000025677) #34	UBXN1 (ENSTSYG00000004434) #36	UQCC3 (ENSTSYG00000006832) #37	LBHD1 (ENSTSYG00000008520)	CSKMT (ENSTSYG00000008533)
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000011640	ENSGT00390000012424.a	ENSGT00390000008351	ENSGT00390000007071	ENSGT00390000011180	ENSGT00390000018613.b.s.a	ENSGT00940000161375.b	ENSGT00940000162437	ENSGT00940000162436 #10	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Mouse lemur	MODERN SPECIES	27	C11orf68 (ENSMICG00000012852)	DRAP1 (ENSMICG00000032164)	TSGA10IP (ENSMICG00000038933)	SART1 (ENSMICG00000030096)	EIF1AD (ENSMICG00000038645)	BANF1 (ENSMICG00000037787)	CST6 (ENSMICG00000017209)	CATSPER1 (ENSMICG00000017211)	ENSMICG00000035999	PLAAT5 (ENSMICG00000004239) #10	SLC22A24 (ENSMICG00000034911)	SLC22A8 (ENSMICG00000006419) #17	SLC22A6 (ENSMICG00000026456) #18	CHRM1 (ENSMICG00000047391) #20	SLC3A2 (ENSMICG00000017390) #21	WDR74 (ENSMICG00000017388) #22	TEX54 (ENSMICG00000046387) #23	STX5 (ENSMICG00000017386) #24	NXF1 (ENSMICG00000000980) #25	TMEM223 (ENSMICG00000046109) #26	TMEM179B (ENSMICG00000000976) #27	TAF6L (ENSMICG00000036223) #28	POLR2G (ENSMICG00000009967) #29	ZBTB3 (ENSMICG00000009961) #30	TTC9C (ENSMICG00000042013) #31	HNRNPUL2 (ENSMICG00000009943) #32	GNG3 (ENSMICG00000028299) #33	ENSMICG00000033250 #34	UBXN1 (ENSMICG00000009925) #36	UQCC3 (ENSMICG00000026609) #37	CSKMT (ENSMICG00000038782)
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00390000011640	ENSGT00390000012424.a	ENSGT00390000008351	ENSGT00390000007071	ENSGT00390000011180	ENSGT00390000018613.b.s.a	ENSGT00940000161375.b	ENSGT00940000162437	ENSGT00940000162436 #10	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Coquerels sifaka	MODERN SPECIES	124	FOSL1 (ENSPCOG00000027454)	C11orf68 (ENSPCOG00000003847)	DRAP1 (ENSPCOG00000018977)	TSGA10IP (ENSPCOG00000016636)	SART1 (ENSPCOG00000008448)	EIF1AD (ENSPCOG00000026199)	BANF1 (ENSPCOG00000017573)	CST6 (ENSPCOG00000014875)	CATSPER1 (ENSPCOG00000017509)	PLAAT5 (ENSPCOG00000014222) #10	SLC22A24 (ENSPCOG00000014735)	SLC22A8 (ENSPCOG00000024141) #17	SLC22A6 (ENSPCOG00000017938) #18	CHRM1 (ENSPCOG00000013215) #20	SLC3A2 (ENSPCOG00000028096) #21	WDR74 (ENSPCOG00000024846) #22	TEX54 (ENSPCOG00000020742) #23	STX5 (ENSPCOG00000024733) #24	NXF1 (ENSPCOG00000024446) #25	TMEM223 (ENSPCOG00000028275) #26	TMEM179B (ENSPCOG00000023933) #27	TAF6L (ENSPCOG00000017276) #28	POLR2G (ENSPCOG00000024131) #29	ZBTB3 (ENSPCOG00000020656) #30	TTC9C (ENSPCOG00000017839) #31	HNRNPUL2 (ENSPCOG00000013502) #32	GNG3 (ENSPCOG00000017973) #33	BSCL2 (ENSPCOG00000015043) #34	UBXN1 (ENSPCOG00000019984) #36	UQCC3 (ENSPCOG00000019522) #37	CSKMT (ENSPCOG00000016342)
Greater bamboo lemur	MODERN SPECIES	101									PLAAT5 (ENSPSMG00000023332) #10	SLC22A24 (ENSPSMG00000023328)	SLC22A8 (ENSPSMG00000023317) #17	SLC22A6 (ENSPSMG00000023289) #18	ENSPSMG00000023261 #19	CHRM1 (ENSPSMG00000023259) #20	SLC3A2 (ENSPSMG00000023235) #21	WDR74 (ENSPSMG00000023161) #22	STX5 (ENSPSMG00000023098) #24	NXF1 (ENSPSMG00000023076) #25	TMEM223 (ENSPSMG00000023035) #26	TMEM179B (ENSPSMG00000023026) #27	TAF6L (ENSPSMG00000023017) #28	POLR2G (ENSPSMG00000023003) #29	ZBTB3 (ENSPSMG00000022991) #30	ENSPSMG00000022990	HNRNPUL2 (ENSPSMG00000022973) #32	GNG3 (ENSPSMG00000022948) #33	BSCL2 (ENSPSMG00000022881) #34	LRRN4CL (ENSPSMG00000022803) #35	UBXN1 (ENSPSMG00000022794) #36	UQCC3 (ENSPSMG00000022737) #37	CSKMT (ENSPSMG00000022734)
Bushbaby	MODERN SPECIES	255	BANF1 (ENSOGAG00000016530)	CST6 (ENSOGAG00000016534)	CATSPER1 (ENSOGAG00000016536)	LGALS12 (ENSOGAG00000009408) #9	ENSOGAG00000027568	PLAAT5 (ENSOGAG00000004581) #10	ENSOGAG00000003053	ENSOGAG00000029377	ENSOGAG00000003051	ENSOGAG00000030634	ENSOGAG00000006579	SLC22A8 (ENSOGAG00000003588) #17	SLC22A6 (ENSOGAG00000003585) #18	CHRM1 (ENSOGAG00000028685) #20	SLC3A2 (ENSOGAG00000027003) #21	WDR74 (ENSOGAG00000015303) #22	STX5 (ENSOGAG00000015298) #24	NXF1 (ENSOGAG00000008901) #25	TMEM223 (ENSOGAG00000024913) #26	TMEM179B (ENSOGAG00000008897) #27	TAF6L (ENSOGAG00000008893) #28	POLR2G (ENSOGAG00000032720) #29	ZBTB3 (ENSOGAG00000011414) #30	TTC9C (ENSOGAG00000003305) #31	HNRNPUL2 (ENSOGAG00000003302) #32	GNG3 (ENSOGAG00000034224) #33	BSCL2 (ENSOGAG00000025056) #34	LRRN4CL (ENSOGAG00000031003) #35	UBXN1 (ENSOGAG00000011411) #36	UQCC3 (ENSOGAG00000028729) #37	LBHD1 (ENSOGAG00000025205)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000015119 #22
Hedgehog	MODERN SPECIES	3005																ENSEEUG00000006476 #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000162660.b.e.b	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.m #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.m #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.m #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.b #16	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.m #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Narwhal	MODERN SPECIES	314	MARK2 (ENSMMNG00015017076)	SPINDOC (ENSMMNG00015016898)	ZFTA (ENSMMNG00015016857)	RTN3 (ENSMMNG00015016643)	ATL3 (ENSMMNG00015016525) #7	PLAAT3 (ENSMMNG00015016480) #8	LGALS12 (ENSMMNG00015016331) #9	ENSMMNG00015016290 #10	SLC22A9 (ENSMMNG00015016223) #16	ENSMMNG00015016196	ENSMMNG00015016169	SLC22A8 (ENSMMNG00015015986) #17	SLC22A6 (ENSMMNG00015015915) #18	ENSMMNG00015015886	SLC3A2 (ENSMMNG00015020226) #21	WDR74 (ENSMMNG00015020091) #22	STX5 (ENSMMNG00015019992) #24	NXF1 (ENSMMNG00015019918) #25	TMEM223 (ENSMMNG00015019880) #26	TMEM179B (ENSMMNG00015019852) #27	TAF6L (ENSMMNG00015019824) #28	POLR2G (ENSMMNG00015019791) #29	ZBTB3 (ENSMMNG00015019770) #30	TTC9C (ENSMMNG00015019753) #31	HNRNPUL2 (ENSMMNG00015019703) #32	GNG3 (ENSMMNG00015019682) #33	BSCL2 (ENSMMNG00015019637) #34	ENSMMNG00015019615 #35	UBXN1 (ENSMMNG00015019592) #36	UQCC3 (ENSMMNG00015019569) #37	CSKMT (ENSMMNG00015019549)
Beluga whale	MODERN SPECIES	7	ZFTA (ENSDLEG00000017003)	RTN3 (ENSDLEG00000017027)	ATL3 (ENSDLEG00000017041) #7	PLAAT3 (ENSDLEG00000017064) #8	LGALS12 (ENSDLEG00000017077) #9	ENSDLEG00000017093	ENSDLEG00000017101 #10	SLC22A9 (ENSDLEG00000017119) #16	ENSDLEG00000017168	ENSDLEG00000017182	SLC22A8 (ENSDLEG00000017206) #17	SLC22A6 (ENSDLEG00000017243) #18	ENSDLEG00000017288	CHRM1 (ENSDLEG00000017296) #20	SLC3A2 (ENSDLEG00000017306) #21	WDR74 (ENSDLEG00000017431) #22	STX5 (ENSDLEG00000017563) #24	NXF1 (ENSDLEG00000017803) #25	TMEM223 (ENSDLEG00000018313) #26	TMEM179B (ENSDLEG00000018318) #27	TAF6L (ENSDLEG00000018328) #28	POLR2G (ENSDLEG00000018335) #29	ZBTB3 (ENSDLEG00000018348) #30	TTC9C (ENSDLEG00000018352) #31	HNRNPUL2 (ENSDLEG00000018363) #32	GNG3 (ENSDLEG00000018479) #33	BSCL2 (ENSDLEG00000018487) #34	LRRN4CL (ENSDLEG00000018503) #35	UBXN1 (ENSDLEG00000018521) #36	UQCC3 (ENSDLEG00000018687) #37	METTL12 (ENSDLEG00000018693)
Vaquita	MODERN SPECIES	19	MARK2 (ENSPSNG00000004479)	SPINDOC (ENSPSNG00000004396)	ZFTA (ENSPSNG00000004374)	RTN3 (ENSPSNG00000004269)	ATL3 (ENSPSNG00000004187) #7	LGALS12 (ENSPSNG00000020749) #9	SLC22A9 (ENSPSNG00000020492) #16	ENSPSNG00000020456	ENSPSNG00000020372	SLC22A8 (ENSPSNG00000020185) #17	SLC22A6 (ENSPSNG00000019972) #18	ENSPSNG00000019902 #18	ENSPSNG00000019881	CHRM1 (ENSPSNG00000019868) #20	SLC3A2 (ENSPSNG00000019788) #21	WDR74 (ENSPSNG00000019672) #22	NXF1 (ENSPSNG00000019489) #25	TMEM223 (ENSPSNG00000019439) #26	TMEM179B (ENSPSNG00000019377) #27	TAF6L (ENSPSNG00000019327) #28	POLR2G (ENSPSNG00000019278) #29	ZBTB3 (ENSPSNG00000019250) #30	TTC9C (ENSPSNG00000019225) #31	HNRNPUL2 (ENSPSNG00000019048) #32	GNG3 (ENSPSNG00000019000) #33	BSCL2 (ENSPSNG00000018928) #34	LRRN4CL (ENSPSNG00000018896) #35	UBXN1 (ENSPSNG00000018815) #36	ENSPSNG00000018693 #37	CSKMT (ENSPSNG00000018651)	LBHD1 (ENSPSNG00000018488)
Dolphin	MODERN SPECIES	2428													SLC22A8 (ENSTTRG00000002488) #17	SLC22A6 (ENSTTRG00000002487) #18	SLC3A2 (ENSTTRG00000002485) #21	WDR74 (ENSTTRG00000002484) #22	STX5 (ENSTTRG00000002483) #24	NXF1 (ENSTTRG00000002482) #25	TMEM223 (ENSTTRG00000002481) #26	TMEM179B (ENSTTRG00000002480) #27	TAF6L (ENSTTRG00000002479) #28	POLR2G (ENSTTRG00000002478) #29	ZBTB3 (ENSTTRG00000002477) #30	ENSTTRG00000002476	HNRNPUL2 (ENSTTRG00000002475) #32	GNG3 (ENSTTRG00000002474) #33	ENSTTRG00000002473 #34	LRRN4CL (ENSTTRG00000002472) #35	UBXN1 (ENSTTRG00000002471) #36	UQCC3 (ENSTTRG00000002470) #37	METTL12 (ENSTTRG00000002469)
Sperm whale	MODERN SPECIES	706																WDR74 (ENSPCTG00005015614) #22	STX5 (ENSPCTG00005015516) #24
Blue whale	MODERN SPECIES	19	SPINDOC (ENSBMSG00010009408)	ZFTA (ENSBMSG00010009395)	RTN3 (ENSBMSG00010009260)	ATL3 (ENSBMSG00010009168) #7	PLAAT3 (ENSBMSG00010009143) #8	LGALS12 (ENSBMSG00010009076) #9	PLAAT5 (ENSBMSG00010009039) #10	SLC22A9 (ENSBMSG00010009021) #16	ENSBMSG00010009002	ENSBMSG00010008993	SLC22A8 (ENSBMSG00010008957) #17	SLC22A6 (ENSBMSG00010008894) #18	ENSBMSG00010008869	CHRM1 (ENSBMSG00010008857) #20	SLC3A2 (ENSBMSG00010008809) #21	WDR74 (ENSBMSG00010008708) #22	NXF1 (ENSBMSG00010008667) #25	TMEM223 (ENSBMSG00010008640) #26	TMEM179B (ENSBMSG00010008625) #27	TAF6L (ENSBMSG00010008522) #28	POLR2G (ENSBMSG00010008473) #29	ZBTB3 (ENSBMSG00010008452) #30	TTC9C (ENSBMSG00010008436) #31	HNRNPUL2 (ENSBMSG00010008413) #32	GNG3 (ENSBMSG00010008393) #33	BSCL2 (ENSBMSG00010008336) #34	LRRN4CL (ENSBMSG00010008324) #35	UBXN1 (ENSBMSG00010008293) #36	UQCC3 (ENSBMSG00010008263) #37	CSKMT (ENSBMSG00010008233)	LBHD1 (ENSBMSG00010008202)
Pecora	ANCESTRAL SPECIES	13	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d.a.a #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.l #16	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d.a.a #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p #31	ENSGT00940000160376 #32	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615	ENSGT00390000008374
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p #31	ENSGT00940000160376 #32	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615	ENSGT00390000008374
Caprinae	ANCESTRAL SPECIES	20	ENSGT00940000154853.d.a.b.a.a #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000161239.l #16	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.a.c	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Goat	MODERN SPECIES	21	ENSCHIG00000014874 #8	ENSCHIG00000016166 #8	ENSCHIG00000003540 #9	ENSCHIG00000011083 #8	ENSCHIG00000020309 #9	PLAAT5 (ENSCHIG00000005227) #10	SLC22A9 (ENSCHIG00000000518) #16	ENSCHIG00000004328 #16	ENSCHIG00000025065	ENSCHIG00000012746	SLC22A8 (ENSCHIG00000015089) #17	SLC22A6 (ENSCHIG00000023566) #18	ENSCHIG00000027134 #18	CHRM1 (ENSCHIG00000012488) #20	SLC3A2 (ENSCHIG00000017772) #21	WDR74 (ENSCHIG00000022750) #22	STX5 (ENSCHIG00000026215) #24	NXF1 (ENSCHIG00000010065) #25	TMEM223 (ENSCHIG00000020466) #26	TMEM179B (ENSCHIG00000026546) #27	TAF6L (ENSCHIG00000013919) #28	POLR2G (ENSCHIG00000023730) #29	ZBTB3 (ENSCHIG00000008054) #30	TTC9C (ENSCHIG00000014645) #31	HNRNPUL2 (ENSCHIG00000020213) #32	GNG3 (ENSCHIG00000015824) #33	BSCL2 (ENSCHIG00000026480) #34	LRRN4CL (ENSCHIG00000009031) #35	UBXN1 (ENSCHIG00000006820) #36	UQCC3 (ENSCHIG00000018953) #37	CSKMT (ENSCHIG00000011409)
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020022856 #8	LGALS12 (ENSOARG00020022698) #9	PLAAT5 (ENSOARG00020022652) #10	ENSOARG00020022597 #16	ENSOARG00020022570 #16	ENSOARG00020022539 #16	ENSOARG00020022510	ENSOARG00020022414	ENSOARG00020022359	ENSOARG00020022311	SLC22A8 (ENSOARG00020022122) #17	SLC22A6 (ENSOARG00020022001) #18	ENSOARG00020021949 #18	CHRM1 (ENSOARG00020021898) #20	SLC3A2 (ENSOARG00020021842) #21	WDR74 (ENSOARG00020021626) #22	STX5 (ENSOARG00020021530) #24	NXF1 (ENSOARG00020021483) #25	TMEM223 (ENSOARG00020021462) #26	TMEM179B (ENSOARG00020021391) #27	TAF6L (ENSOARG00020021329) #28	POLR2G (ENSOARG00020021260) #29	ZBTB3 (ENSOARG00020021245) #30	ENSOARG00020021233	TTC9C (ENSOARG00020021198) #31	HNRNPUL2 (ENSOARG00020021145) #32	GNG3 (ENSOARG00020021111) #33	BSCL2 (ENSOARG00020021030) #34	LRRN4CL (ENSOARG00020021003) #35	UBXN1 (ENSOARG00020020882) #36	UQCC3 (ENSOARG00020020837) #37
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000154853.d.a.b.a.b #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p #31	ENSGT00940000160376 #32	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615	ENSGT00390000008374
Bos	ANCESTRAL SPECIES	11	ENSGT00940000154853.d.a.a #8	ENSGT00940000154853.d.a.b.b #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p.b #31	ENSGT00940000160376 #32	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615.m	ENSGT00390000008374
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000154853.d.a.b.b #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.a	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00940000162994.f.d.k.a.a.a	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p.a.a #31	ENSGT00940000161805.p.b #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005001297 #8	ENSBIXG00005012288 #8	LGALS12 (ENSBIXG00005012274) #9	PLAAT5 (ENSBIXG00005012206) #10	ENSBIXG00005012170 #16	ENSBIXG00005006329	ENSBIXG00005011983	ENSBIXG00005011974	ENSBIXG00005011910	ENSBIXG00005011899	SLC22A8 (ENSBIXG00005000435) #17	SLC22A6 (ENSBIXG00005011838) #18	ENSBIXG00005011826 #18	SLC3A2 (ENSBIXG00005011715) #21	ENSBIXG00005011601	WDR74 (ENSBIXG00005011524) #22	STX5 (ENSBIXG00005000467) #24	ENSBIXG00005011400	NXF1 (ENSBIXG00005011391) #25	TMEM223 (ENSBIXG00005011347) #26	TMEM179B (ENSBIXG00005011316) #27	TAF6L (ENSBIXG00005001087) #28	POLR2G (ENSBIXG00005011296) #29	TTC9C (ENSBIXG00005011271) #31	HNRNPUL2 (ENSBIXG00005006206) #32	BSCL2 (ENSBIXG00005011232) #34	GNG3 (ENSBIXG00005011192) #33	LRRN4CL (ENSBIXG00005011174) #35	UBXN1 (ENSBIXG00005011165) #36	UQCC3 (ENSBIXG00005011106) #37	LBHD1 (ENSBIXG00005011086)
Cow	MODERN SPECIES	21	PLAAT5 (ENSBTAG00000032730) #10	ENSBTAG00000003236 #16	SLC22A9 (ENSBTAG00000039463) #16	ENSBTAG00000000518	ENSBTAG00000054320	SLC22A10 (ENSBTAG00000014584)	ENSBTAG00000038655	ENSBTAG00000037570	ENSBTAG00000050277	SLC22A8 (ENSBTAG00000013644) #17	SLC22A6 (ENSBTAG00000013642) #18	ENSBTAG00000047110 #18	CHRM1 (ENSBTAG00000011579) #20	ENSBTAG00000050000	SLC3A2 (ENSBTAG00000013240) #21	WDR74 (ENSBTAG00000009491) #22	ENSBTAG00000048482	STX5 (ENSBTAG00000009490) #24	NXF1 (ENSBTAG00000009488) #25	TMEM223 (ENSBTAG00000009487) #26	TMEM179B (ENSBTAG00000009486) #27	TAF6L (ENSBTAG00000009484) #28	POLR2G (ENSBTAG00000009483) #29	ZBTB3 (ENSBTAG00000021329) #30	TTC9C (ENSBTAG00000000773) #31	HNRNPUL2 (ENSBTAG00000002510) #32	GNG3 (ENSBTAG00000002508) #33	BSCL2 (ENSBTAG00000002503) #34	LRRN4CL (ENSBTAG00000010484) #35	UBXN1 (ENSBTAG00000010481) #36	UQCC3 (ENSBTAG00000010470) #37
Bos_a	ANCESTRAL SPECIES	85										ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805.p.b #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00390000002615.m
Wild yak	MODERN SPECIES	1714							ENSBMUG00000023806	ENSBMUG00000023781	ENSBMUG00000023761	ENSBMUG00000023753	SLC22A8 (ENSBMUG00000023746) #17	SLC22A6 (ENSBMUG00000023728) #18	ENSBMUG00000023697 #18	CHRM1 (ENSBMUG00000023670) #20	SLC3A2 (ENSBMUG00000023664) #21	WDR74 (ENSBMUG00000023565) #22	STX5 (ENSBMUG00000023529) #24	NXF1 (ENSBMUG00000023515) #25	TMEM223 (ENSBMUG00000023496) #26	TMEM179B (ENSBMUG00000023489) #27	TAF6L (ENSBMUG00000023469) #28	POLR2G (ENSBMUG00000023457) #29	ZBTB3 (ENSBMUG00000023437) #30	TTC9C (ENSBMUG00000023431) #31	HNRNPUL2 (ENSBMUG00000023420) #32	GNG3 (ENSBMUG00000023415) #33	BSCL2 (ENSBMUG00000023406) #34	UBXN1 (ENSBMUG00000023388) #36	UQCC3 (ENSBMUG00000023373) #37	CSKMT (ENSBMUG00000023360)	ENSBMUG00000023348
American bison	MODERN SPECIES	3248	LGALS12 (ENSBBBG00000005432) #9	PLAAT5 (ENSBBBG00000005425) #10	ENSBBBG00000005424 #16	ENSBBBG00000020020 #16	ENSBBBG00000020008	ENSBBBG00000005407	ENSBBBG00000005111	ENSBBBG00000019974	ENSBBBG00000019971	ENSBBBG00000019967	SLC22A8 (ENSBBBG00000005123) #17	SLC22A6 (ENSBBBG00000019919) #18	ENSBBBG00000019891 #18	CHRM1 (ENSBBBG00000005365) #20	SLC3A2 (ENSBBBG00000019812) #21	WDR74 (ENSBBBG00000005172) #22	STX5 (ENSBBBG00000005199) #24	NXF1 (ENSBBBG00000019622) #25	TMEM223 (ENSBBBG00000019568) #26	TMEM179B (ENSBBBG00000019563) #27	TAF6L (ENSBBBG00000005295) #28	POLR2G (ENSBBBG00000008173) #29	ZBTB3 (ENSBBBG00000019531) #30	TTC9C (ENSBBBG00000005281) #31	HNRNPUL2 (ENSBBBG00000019515) #32	GNG3 (ENSBBBG00000019496) #33	BSCL2 (ENSBBBG00000005208) #34	LRRN4CL (ENSBBBG00000019428) #35	UBXN1 (ENSBBBG00000009187) #36	UQCC3 (ENSBBBG00000019369) #37	LBHD1 (ENSBBBG00000019358)
Siberian musk deer	MODERN SPECIES	1224	ATL3 (ENSMMSG00000008889) #7	PLAAT3 (ENSMMSG00000008953) #8	LGALS12 (ENSMMSG00000009042) #9	PLAAT5 (ENSMMSG00000009542) #10	ENSMMSG00000009592 #16	ENSMMSG00000009715 #16	ENSMMSG00000011665 #16	ENSMMSG00000011721	ENSMMSG00000011784	ENSMMSG00000011868	ENSMMSG00000011879	SLC22A8 (ENSMMSG00000011893) #17	SLC22A6 (ENSMMSG00000012011) #18	CHRM1 (ENSMMSG00000012096) #20	SLC3A2 (ENSMMSG00000012111) #21	WDR74 (ENSMMSG00000012237) #22	STX5 (ENSMMSG00000012364) #24	ENSMMSG00000012430 #25	TMEM223 (ENSMMSG00000012527) #26	TMEM179B (ENSMMSG00000012548) #27	TAF6L (ENSMMSG00000012575) #28	ENSMMSG00000012609 #29	ZBTB3 (ENSMMSG00000012634) #30	TTC9C (ENSMMSG00000012643) #31	HNRNPUL2 (ENSMMSG00000012673) #32	BSCL2 (ENSMMSG00000012721) #34	ENSMMSG00000012801 #33	LRRN4CL (ENSMMSG00000012817) #35	UBXN1 (ENSMMSG00000012852) #36	UQCC3 (ENSMMSG00000012897) #37	LBHD1 (ENSMMSG00000012923)
Yarkand deer	MODERN SPECIES	11	PLAAT3 (ENSCHYG00000000190) #8	LGALS12 (ENSCHYG00000000154) #9	ENSCHYG00000000141 #10	ENSCHYG00000000122 #16	ENSCHYG00000000102 #16	ENSCHYG00000000068 #16	ENSCHYG00000000059	ENSCHYG00000000040	ENSCHYG00000000030	ENSCHYG00000020357	ENSCHYG00000020101	SLC22A8 (ENSCHYG00000019926) #17	SLC22A6 (ENSCHYG00000019813) #18	CHRM1 (ENSCHYG00000019787) #20	SLC3A2 (ENSCHYG00000019634) #21	WDR74 (ENSCHYG00000019192) #22	ENSCHYG00000019153 #23	STX5 (ENSCHYG00000018938) #24	NXF1 (ENSCHYG00000018593) #25	TMEM223 (ENSCHYG00000018545) #26	TMEM179B (ENSCHYG00000018397) #27	TAF6L (ENSCHYG00000018298) #28	POLR2G (ENSCHYG00000018228) #29	ZBTB3 (ENSCHYG00000018210) #30	TTC9C (ENSCHYG00000018166) #31	HNRNPUL2 (ENSCHYG00000017808) #32	GNG3 (ENSCHYG00000017765) #33	BSCL2 (ENSCHYG00000017544) #34	LRRN4CL (ENSCHYG00000017512) #35	UBXN1 (ENSCHYG00000017331) #36	UQCC3 (ENSCHYG00000017276) #37
Camelidae	ANCESTRAL SPECIES	55					ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.b #16	ENSGT00940000163667.b.f	ENSGT00940000163667.b.e	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589.e #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Arabian camel	MODERN SPECIES	1	ATL3 (ENSCDRG00005019542) #7	PLAAT3 (ENSCDRG00005019659) #8	ENSCDRG00005019739	LGALS12 (ENSCDRG00005019752) #9	ENSCDRG00005019804 #10	ENSCDRG00005019903 #16	ENSCDRG00005019931 #16	ENSCDRG00005019949	ENSCDRG00005019998	SLC22A8 (ENSCDRG00005020013) #17	SLC22A6 (ENSCDRG00005020053) #18	ENSCDRG00005020082 #18	ENSCDRG00005004630 #19	CHRM1 (ENSCDRG00005004637) #20	SLC3A2 (ENSCDRG00005004655) #21	WDR74 (ENSCDRG00005004811) #22	STX5 (ENSCDRG00005004888) #24	NXF1 (ENSCDRG00005004967) #25	TMEM223 (ENSCDRG00005005013) #26	TMEM179B (ENSCDRG00005005027) #27	TAF6L (ENSCDRG00005005091) #28	POLR2G (ENSCDRG00005005119) #29	ZBTB3 (ENSCDRG00005005155) #30	TTC9C (ENSCDRG00005005167) #31	HNRNPUL2 (ENSCDRG00005005188) #32	GNG3 (ENSCDRG00005005252) #33	BSCL2 (ENSCDRG00005005265) #34	LRRN4CL (ENSCDRG00005005348) #35	UBXN1 (ENSCDRG00005005366) #36	UQCC3 (ENSCDRG00005005440) #37	LBHD1 (ENSCDRG00005005473)
Alpaca	MODERN SPECIES	1452																WDR74 (ENSVPAG00000009537) #22	STX5 (ENSVPAG00000009536) #24	POLR2G (ENSVPAG00000009534) #29	ENSVPAG00000009532	ENSVPAG00000009531 #32	ENSVPAG00000009530 #34	UBXN1 (ENSVPAG00000009529) #36	UQCC3 (ENSVPAG00000009527) #37	LBHD1 (ENSVPAG00000009526)
Suina	ANCESTRAL SPECIES	14	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.k.a.a #16	ENSGT00940000161239.k.a.b #16	ENSGT00940000161239.k.b #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT01090000260892	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Chacoan peccary	MODERN SPECIES	920	ZFTA (ENSCWAG00000016412)	RTN3 (ENSCWAG00000016492)	ATL3 (ENSCWAG00000016882) #7	PLAAT3 (ENSCWAG00000016923) #8	PLAAT4 (ENSCWAG00000016973)	LGALS12 (ENSCWAG00000017018) #9	ENSCWAG00000017126	PLAAT5 (ENSCWAG00000017146) #10	SLC22A9 (ENSCWAG00000017234) #16	ENSCWAG00000017311	SLC22A8 (ENSCWAG00000017452) #17	SLC22A6 (ENSCWAG00000017692) #18	ENSCWAG00000018111	CHRM1 (ENSCWAG00000018122) #20	SLC3A2 (ENSCWAG00000018136) #21	WDR74 (ENSCWAG00000018241) #22	STX5 (ENSCWAG00000018346) #24	NXF1 (ENSCWAG00000018375) #25	TMEM223 (ENSCWAG00000018420) #26	TMEM179B (ENSCWAG00000018442) #27	TAF6L (ENSCWAG00000018470) #28	POLR2G (ENSCWAG00000018485) #29	ZBTB3 (ENSCWAG00000018506) #30	TTC9C (ENSCWAG00000018515) #31	HNRNPUL2 (ENSCWAG00000018533) #32	BSCL2 (ENSCWAG00000018615) #34	GNG3 (ENSCWAG00000018653) #33	LRRN4CL (ENSCWAG00000018681) #35	UBXN1 (ENSCWAG00000018701) #36	UQCC3 (ENSCWAG00000018794) #37	CSKMT (ENSCWAG00000018813)
Pig	MODERN SPECIES	10	ATL3 (ENSSSCG00000013054) #7	PLAAT3 (ENSSSCG00000026914) #8	LGALS12 (ENSSSCG00000013056) #9	PLAAT5 (ENSSSCG00000061988) #10	ENSSSCG00000013057 #16	ENSSSCG00000027453 #16	ENSSSCG00000028537 #16	ENSSSCG00000029248	ENSSSCG00000060619	ENSSSCG00000061902	ENSSSCG00000025413	SLC22A8 (ENSSSCG00000029516) #17	SLC22A6 (ENSSSCG00000023571) #18	ENSSSCG00000040074 #19	SLC3A2 (ENSSSCG00000022404) #21	WDR74 (ENSSSCG00000028025) #22	TEX54 (ENSSSCG00000045572) #23	STX5 (ENSSSCG00000026293) #24	NXF1 (ENSSSCG00000022866) #25	TMEM223 (ENSSSCG00000038711) #26	TMEM179B (ENSSSCG00000032696) #27	TAF6L (ENSSSCG00000020665) #28	POLR2G (ENSSSCG00000025571) #29	ENSSSCG00000037745 #30	TTC9C (ENSSSCG00000035472) #31	HNRNPUL2 (ENSSSCG00000028542) #32	BSCL2 (ENSSSCG00000020823) #34	ENSSSCG00000032197 #33	UBXN1 (ENSSSCG00000023110) #36	UQCC3 (ENSSSCG00000038370) #37	CSKMT (ENSSSCG00000027847)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Carnivora	ANCESTRAL SPECIES	7	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT01100000263497.B.c.a #33	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Caniformia	ANCESTRAL SPECIES	21	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT01100000263497.B.c.a #33	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162660.b.e.b	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162660.b.e.b	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457.cb #36	ENSGT00390000001930 #37	ENSGT00510000049875
Ursus	ANCESTRAL SPECIES	63								ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457.cb #36	ENSGT00390000001930 #37	ENSGT00510000049875
American black bear	MODERN SPECIES	3685											SLC22A8 (ENSUAMG00000017118) #17	SLC22A6 (ENSUAMG00000017121) #18	ENSUAMG00000017125 #19	CHRM1 (ENSUAMG00000017126) #20	SLC3A2 (ENSUAMG00000017134) #21	WDR74 (ENSUAMG00000017153) #22	ENSUAMG00000017188
Polar bear	MODERN SPECIES	303								ENSUMAG00000014844 #10	SLC22A9 (ENSUMAG00000014693) #16	SLC22A10 (ENSUMAG00000014649)	SLC22A8 (ENSUMAG00000014618) #17	SLC22A6 (ENSUMAG00000014598) #18	ENSUMAG00000014595 #19	CHRM1 (ENSUMAG00000014593) #20	SLC3A2 (ENSUMAG00000014587) #21	WDR74 (ENSUMAG00000014565) #22	STX5 (ENSUMAG00000014558) #24	NXF1 (ENSUMAG00000014552) #25	TMEM179B (ENSUMAG00000014547) #27	ENSUMAG00000014541	POLR2G (ENSUMAG00000014537) #29	ZBTB3 (ENSUMAG00000014533) #30	TTC9C (ENSUMAG00000014527) #31	HNRNPUL2 (ENSUMAG00000014465) #32	GNG3 (ENSUMAG00000014458) #33	BSCL2 (ENSUMAG00000014444) #34	LRRN4CL (ENSUMAG00000014439) #35	UBXN1 (ENSUMAG00000014411) #36	UQCC3 (ENSUMAG00000014404) #37	CSKMT (ENSUMAG00000014401)	C11orf98 (ENSUMAG00000014389)
Giant Panda	MODERN SPECIES	7	RCOR2 (ENSAMEG00000018101)	MARK2 (ENSAMEG00000018111)	SPINDOC (ENSAMEG00000018132)	ZFTA (ENSAMEG00000025175)	RTN3 (ENSAMEG00000018135)	ATL3 (ENSAMEG00000018141) #7	PLAAT3 (ENSAMEG00000023459) #8	ENSAMEG00000018150	LGALS12 (ENSAMEG00000027710) #9	SLC22A9 (ENSAMEG00000005817) #16	SLC22A10 (ENSAMEG00000005956)	SLC22A8 (ENSAMEG00000005991) #17	SLC22A6 (ENSAMEG00000006012) #18	CHRM1 (ENSAMEG00000020258) #20	SLC3A2 (ENSAMEG00000006140) #21	WDR74 (ENSAMEG00000006160) #22	STX5 (ENSAMEG00000006206) #24	NXF1 (ENSAMEG00000006237) #25	TMEM223 (ENSAMEG00000024479) #26	TMEM179B (ENSAMEG00000006357) #27	TAF6L (ENSAMEG00000006364) #28	POLR2G (ENSAMEG00000006386) #29	ZBTB3 (ENSAMEG00000024771) #30	TTC9C (ENSAMEG00000006425) #31	HNRNPUL2 (ENSAMEG00000006434) #32	ENSAMEG00000002116 #33	GNG3 (ENSAMEG00000006462) #33	BSCL2 (ENSAMEG00000006466) #34	UBXN1 (ENSAMEG00000006490) #36	UQCC3 (ENSAMEG00000020260) #37	CSKMT (ENSAMEG00000006516)
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Ferret	MODERN SPECIES	314	MARK2 (ENSMPUG00000013326)	SPINDOC (ENSMPUG00000013338)	ZFTA (ENSMPUG00000013353)	ENSMPUG00000013356	ATL3 (ENSMPUG00000013363) #7	ENSMPUG00000013476 #8	ENSMPUG00000013479 #8	LGALS12 (ENSMPUG00000013482) #9	PLAAT5 (ENSMPUG00000013509) #10	SLC22A9 (ENSMPUG00000013528) #16	ENSMPUG00000013536	SLC22A8 (ENSMPUG00000013544) #17	SLC22A6 (ENSMPUG00000013551) #18	CHRM1 (ENSMPUG00000019995) #20	SLC3A2 (ENSMPUG00000013553) #21	WDR74 (ENSMPUG00000013557) #22	TMEM179B (ENSMPUG00000013609) #27	STX5 (ENSMPUG00000013614) #24	NXF1 (ENSMPUG00000013658) #25	TMEM223 (ENSMPUG00000013664) #26	POLR2G (ENSMPUG00000013667) #29	ZBTB3 (ENSMPUG00000013694) #30	TTC9C (ENSMPUG00000013698) #31	HNRNPUL2 (ENSMPUG00000013707) #32	GNG3 (ENSMPUG00000013710) #33	BSCL2 (ENSMPUG00000013712) #34	UBXN1 (ENSMPUG00000013715) #36	LBHD1 (ENSMPUG00000013735)	CSKMT (ENSMPUG00000013738)	INTS5 (ENSMPUG00000013741)	GANAB (ENSMPUG00000013744)
American mink	MODERN SPECIES	215							LGALS12 (ENSNVIG00000019356) #9	PLAAT5 (ENSNVIG00000019411) #10	SLC22A9 (ENSNVIG00000019546) #16	SLC22A10 (ENSNVIG00000020248)	SLC22A8 (ENSNVIG00000020290) #17	SLC22A6 (ENSNVIG00000020357) #18	ENSNVIG00000020395 #19	CHRM1 (ENSNVIG00000020398) #20	SLC3A2 (ENSNVIG00000020406) #21	WDR74 (ENSNVIG00000020499) #22	STX5 (ENSNVIG00000020600) #24	NXF1 (ENSNVIG00000020616) #25	TMEM223 (ENSNVIG00000020681) #26	TMEM179B (ENSNVIG00000020688) #27	TAF6L (ENSNVIG00000020709) #28	RPB7 (ENSNVIG00000020718) #29	ZBTB3 (ENSNVIG00000020739) #30	TTC9C (ENSNVIG00000020741) #31	HNRNPUL2 (ENSNVIG00000020754) #32	BSCL2 (ENSNVIG00000020778) #34	GBG3 (ENSNVIG00000020795) #33	LRRN4CL (ENSNVIG00000020803) #35	UBXN1 (ENSNVIG00000020815) #36	UQCC3 (ENSNVIG00000020874) #37	MTL12 (ENSNVIG00000020886)
Canidae	ANCESTRAL SPECIES	13	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.a #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d.e	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.a #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Dog	MODERN SPECIES	9	ENSCAFG00845006483	PLAAT3 (ENSCAFG00845006522) #8	ENSCAFG00845006559 ##8	PLAAT4 (ENSCAFG00845006599)	LGALS12 (ENSCAFG00845006674) #9	PLAAT5 (ENSCAFG00845006736) #10	SLC22A9 (ENSCAFG00845006786) #16	SLC22A10 (ENSCAFG00845006977)	ENSCAFG00845007034	ENSCAFG00845007087 #16	ENSCAFG00845007123	ENSCAFG00845007168 #17	SLC22A6 (ENSCAFG00845007241) #18	CHRM1 (ENSCAFG00845007309) #20	SLC3A2 (ENSCAFG00845007354) #21	WDR74 (ENSCAFG00845007617) #22	STX5 (ENSCAFG00845007709) #24	NXF1 (ENSCAFG00845007836) #25	TMEM179B (ENSCAFG00845008033) #27	TMEM223 (ENSCAFG00845008107) #26	TAF6L (ENSCAFG00845008143) #28	POLR2G (ENSCAFG00845008221) #29	ZBTB3 (ENSCAFG00845008270) #30	TTC9C (ENSCAFG00845008314) #31	HNRNPUL2 (ENSCAFG00845008372) #32	BSCL2 (ENSCAFG00845008494) #34	GNG3 (ENSCAFG00845008569) #33	LRRN4CL (ENSCAFG00845008587) #35	UBXN1 (ENSCAFG00845008628) #36	UQCC3 (ENSCAFG00845008750) #37	C18H11orf98 (ENSCAFG00845008795)
Dingo	MODERN SPECIES	36	ENSCAFG00020013937	ATL3 (ENSCAFG00020013890) #7	PLAAT3 (ENSCAFG00020013886) #8	ENSCAFG00020013885 ##8	PLAAT4 (ENSCAFG00020013883)	LGALS12 (ENSCAFG00020013880) #9	ENSCAFG00020013852 #10	SLC22A9 (ENSCAFG00020013593) #16	ENSCAFG00020013569	SLC22A10 (ENSCAFG00020013312)	ENSCAFG00020013304 #16	SLC22A8 (ENSCAFG00020013254) #17	SLC22A6 (ENSCAFG00020013234) #18	CHRM1 (ENSCAFG00020013229) #20	SLC3A2 (ENSCAFG00020013226) #21	WDR74 (ENSCAFG00020013159) #22	STX5 (ENSCAFG00020013153) #24	NXF1 (ENSCAFG00020013149) #25	TMEM223 (ENSCAFG00020013148) #26	TMEM179B (ENSCAFG00020013145) #27	TAF6L (ENSCAFG00020013140) #28	POLR2G (ENSCAFG00020013136) #29	ZBTB3 (ENSCAFG00020013133) #30	TTC9C (ENSCAFG00020013129) #31	HNRNPUL2 (ENSCAFG00020013120) #32	GNG3 (ENSCAFG00020013115) #33	BSCL2 (ENSCAFG00020013107) #34	LRRN4CL (ENSCAFG00020013104) #35	UBXN1 (ENSCAFG00020013102) #36	UQCC3 (ENSCAFG00020013100) #37	CSKMT (ENSCAFG00020013099)
Red fox	MODERN SPECIES	49	ZFTA (ENSVVUG00000029797)	RTN3 (ENSVVUG00000029798)	ATL3 (ENSVVUG00000029799) #7	PLA2G16 (ENSVVUG00000029803) #8	ENSVVUG00000029804 ##8	RARRES3 (ENSVVUG00000029807)	LGALS12 (ENSVVUG00000029809) #9	ENSVVUG00000029813 #10	SLC22A9 (ENSVVUG00000029817) #16	SLC22A10 (ENSVVUG00000029819)	ENSVVUG00000029820 #16	SLC22A8 (ENSVVUG00000029821) #17	SLC22A6 (ENSVVUG00000029822) #18	CHRM1 (ENSVVUG00000029823) #20	SLC3A2 (ENSVVUG00000029824) #21	WDR74 (ENSVVUG00000029836) #22	STX5 (ENSVVUG00000029839) #24	NXF1 (ENSVVUG00000029840) #25	TMEM223 (ENSVVUG00000029841) #26	TMEM179B (ENSVVUG00000029842) #27	TAF6L (ENSVVUG00000029843) #28	POLR2G (ENSVVUG00000029844) #29	TTC9C (ENSVVUG00000029845) #31	HNRNPUL2 (ENSVVUG00000029847) #32	GNG3 (ENSVVUG00000029850) #33	BSCL2 (ENSVVUG00000029852) #34	ENSVVUG00000029854 #35	UBXN1 (ENSVVUG00000029856) #36	UQCC3 (ENSVVUG00000029857) #37	CSKMT (ENSVVUG00000029858)	INTS5 (ENSVVUG00000029860)
Felidae	ANCESTRAL SPECIES		ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000163667	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Panthera	ANCESTRAL SPECIES	18	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000163667	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Tiger	MODERN SPECIES	369	MARK2 (ENSPTIG00000013108)	SPINDOC (ENSPTIG00000007294)	ENSPTIG00000008262	ATL3 (ENSPTIG00000009817) #7	PLAAT3 (ENSPTIG00000012106) #8	LGALS12 (ENSPTIG00000013920) #9	PLAAT5 (ENSPTIG00000016710) #10	SLC22A9 (ENSPTIG00000018254) #16	ENSPTIG00000019174	ENSPTIG00000006918 #16	SLC22A8 (ENSPTIG00000019571) #17	SLC22A6 (ENSPTIG00000008570) #18	ENSPTIG00000007098 #19	CHRM1 (ENSPTIG00000007102) #20	SLC3A2 (ENSPTIG00000012539) #21	WDR74 (ENSPTIG00000016962) #22	STX5 (ENSPTIG00000005204) #24	NXF1 (ENSPTIG00000008897) #25	ENSPTIG00000014441 #27	TAF6L (ENSPTIG00000014940) #28	POLR2G (ENSPTIG00000015781) #29	ZBTB3 (ENSPTIG00000016774) #30	TTC9C (ENSPTIG00000017476) #31	HNRNPUL2 (ENSPTIG00000017670) #32	ENSPTIG00000019130 #33	BSCL2 (ENSPTIG00000019239) #34	LRRN4CL (ENSPTIG00000000217) #35	UBXN1 (ENSPTIG00000008345) #36	UQCC3 (ENSPTIG00000012993) #37	CSKMT (ENSPTIG00000013521)	C11orf98 (ENSPTIG00000013699)
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000163667	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B.c.b #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
leopard	MODERN SPECIES	64	SPINDOC (ENSPPRG00000010767)	ZFTA (ENSPPRG00000011316)	ENSPPRG00000012195	ATL3 (ENSPPRG00000012865) #7	PLAAT3 (ENSPPRG00000013267) #8	LGALS12 (ENSPPRG00000015392) #9	PLAAT5 (ENSPPRG00000017226) #10	SLC22A9 (ENSPPRG00000019825) #16	ENSPPRG00000015426 #16	SLC22A8 (ENSPPRG00000023668) #17	SLC22A6 (ENSPPRG00000000682) #18	ENSPPRG00000015606 #19	ENSPPRG00000015614 #19	CHRM1 (ENSPPRG00000015634) #20	SLC3A2 (ENSPPRG00000001175) #21	WDR74 (ENSPPRG00000002422) #22	STX5 (ENSPPRG00000003034) #24	NXF1 (ENSPPRG00000004342) #25	TMEM223 (ENSPPRG00000004902) #26	TMEM179B (ENSPPRG00000005200) #27	TAF6L (ENSPPRG00000005589) #28	POLR2G (ENSPPRG00000005669) #29	ZBTB3 (ENSPPRG00000005891) #30	TTC9C (ENSPPRG00000005993) #31	HNRNPUL2 (ENSPPRG00000006380) #32	ENSPPRG00000006909 #33	BSCL2 (ENSPPRG00000008935) #34	LRRN4CL (ENSPPRG00000015844) #35	UBXN1 (ENSPPRG00000010233) #36	UQCC3 (ENSPPRG00000010596) #37	C11orf98 (ENSPPRG00000010833)
lion	MODERN SPECIES	10	MARK2 (ENSPLOG00000010018)	SPINDOC (ENSPLOG00000009801)	ZFTA (ENSPLOG00000009772)	RTN3 (ENSPLOG00000009548)	ATL3 (ENSPLOG00000009379) #7	PLAAT3 (ENSPLOG00000009329) #8	ENSPLOG00000009308	LGALS12 (ENSPLOG00000009103) #9	ENSPLOG00000008882 #10	SLC22A9 (ENSPLOG00000008724) #16	ENSPLOG00000008688	ENSPLOG00000008657 #16	SLC22A6 (ENSPLOG00000008482) #18	CHRM1 (ENSPLOG00000008442) #20	SLC3A2 (ENSPLOG00000008401) #21	WDR74 (ENSPLOG00000008195) #22	STX5 (ENSPLOG00000008115) #24	NXF1 (ENSPLOG00000007934) #25	TMEM223 (ENSPLOG00000007904) #26	TMEM179B (ENSPLOG00000007851) #27	TAF6L (ENSPLOG00000007778) #28	POLR2G (ENSPLOG00000007747) #29	ZBTB3 (ENSPLOG00000007729) #30	TTC9C (ENSPLOG00000007708) #31	HNRNPUL2 (ENSPLOG00000007617) #32	ENSPLOG00000007595 #33	BSCL2 (ENSPLOG00000007556) #34	LRRN4CL (ENSPLOG00000009871) #35	UBXN1 (ENSPLOG00000009769) #36	UQCC3 (ENSPLOG00000009743) #37	CSKMT (ENSPLOG00000009731)
Cat	MODERN SPECIES	241	CD1H11orf95 (ENSFCAG00000032639)	RTN3 (ENSFCAG00000023202)	ATL3 (ENSFCAG00000031360) #7	PLAAT3 (ENSFCAG00000001309) #8	PLAAT2 (ENSFCAG00000036450) ##8	ENSFCAG00000051640	LGALS12 (ENSFCAG00000014648) #9	PLAAT5 (ENSFCAG00000030094) #10	SLC22A25 (ENSFCAG00000018565)	ENSFCAG00000041221	SLC22A8 (ENSFCAG00000005255) #17	SLC22A6 (ENSFCAG00000005247) #18	ENSFCAG00000035000 #19	CHRM1 (ENSFCAG00000000336) #20	SLC3A2 (ENSFCAG00000014781) #21	WDR74 (ENSFCAG00000014780) #22	STX5 (ENSFCAG00000014778) #24	NXF1 (ENSFCAG00000014774) #25	TMEM223 (ENSFCAG00000025098) #26	TMEM179B (ENSFCAG00000014773) #27	TAF6L (ENSFCAG00000022346) #28	POLR2G (ENSFCAG00000026072) #29	ZBTB3 (ENSFCAG00000044175) #30	TTC9C (ENSFCAG00000014768) #31	HNRNPUL2 (ENSFCAG00000014766) #32	ENSFCAG00000035265 #33	BSCL2 (ENSFCAG00000018428) #34	LRRN4CL (ENSFCAG00000044682) #35	UBXN1 (ENSFCAG00000008866) #36	UQCC3 (ENSFCAG00000026508) #37	CSKMT (ENSFCAG00000019062)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Equus	ANCESTRAL SPECIES	11	ENSGT00940000162878.c.a.a	ENSGT00940000162878.c.b	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239.n.b #16	ENSGT00940000161239.m.a #16	ENSGT00940000161239.m.b #16	ENSGT00940000161239.n.a #16	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT00940000157004.a.b.a #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT00700000106100 #23	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486.a #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37
Horse	MODERN SPECIES	3	ENSECAG00000032959	LGALS12 (ENSECAG00000019637) #9	PLAAT5 (ENSECAG00000019603) #10	ENSECAG00000049087 #16	ENSECAG00000030790 #16	ENSECAG00000055620	ENSECAG00000054899 #16	SLC22A10 (ENSECAG00000014789)	SLC22A24 (ENSECAG00000013637)	ENSECAG00000018908 #16	SLC22A8 (ENSECAG00000012673) #17	SLC22A6 (ENSECAG00000010602) #18	ENSECAG00000034010 #18	SLC3A2 (ENSECAG00000009822) #21	CHRM1 (ENSECAG00000005493) #20	WDR74 (ENSECAG00000009091) #22	TEX54 (ENSECAG00000028010) #23	STX5 (ENSECAG00000008632) #24	NXF1 (ENSECAG00000001426) #25	TMEM223 (ENSECAG00000001265) #26	TMEM179B (ENSECAG00000001075) #27	TAF6L (ENSECAG00000021482) #28	POLR2G (ENSECAG00000021465) #29	ZBTB3 (ENSECAG00000021457) #30	ENSECAG00000050506 #31	HNRNPUL2 (ENSECAG00000020298) #32	GNG3 (ENSECAG00000012185) #33	BSCL2 (ENSECAG00000018657) #34	LRRN4CL (ENSECAG00000005381) #35	UBXN1 (ENSECAG00000017404) #36	UQCC3 (ENSECAG00000017332) #37
Donkey	MODERN SPECIES	8	ENSEASG00005031505 ##8	ENSEASG00005020101	LGALS12 (ENSEASG00005026393) #9	ENSEASG00005012059 #10	ENSEASG00005037448 #16	ENSEASG00005037691 #16	ENSEASG00005029445 #16	ENSEASG00005038155 #16	ENSEASG00005011472	SLC22A24 (ENSEASG00005011428)	SLC22A8 (ENSEASG00005011414) #17	SLC22A6 (ENSEASG00005011412) #18	ENSEASG00005011406 #18	CHRM1 (ENSEASG00005035508) #20	SLC3A2 (ENSEASG00005011398) #21	WDR74 (ENSEASG00005011378) #22	STX5 (ENSEASG00005011371) #24	NXF1 (ENSEASG00005011368) #25	TMEM223 (ENSEASG00005024604) #26	TMEM179B (ENSEASG00005011364) #27	TAF6L (ENSEASG00005011361) #28	POLR2G (ENSEASG00005011357) #29	ENSEASG00005011353 #30	ENSEASG00005029535 #31	HNRNPUL2 (ENSEASG00005011347) #32	GNG3 (ENSEASG00005026313) #33	BSCL2 (ENSEASG00005011244) #34	LRRN4CL (ENSEASG00005025754) #35	UBXN1 (ENSEASG00005011185) #36	UQCC3 (ENSEASG00005034303) #37	CSKMT (ENSEASG00005034678)
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Megabat	MODERN SPECIES	2880														SLC22A8 (ENSPVAG00000003508) #17	SLC3A2 (ENSPVAG00000003503) #21	WDR74 (ENSPVAG00000003500) #22	STX5 (ENSPVAG00000003498) #24	NXF1 (ENSPVAG00000003495) #25	TMEM223 (ENSPVAG00000003491) #26	TMEM179B (ENSPVAG00000003490) #27	TAF6L (ENSPVAG00000003486) #28	POLR2G (ENSPVAG00000003481) #29	ZBTB3 (ENSPVAG00000003477) #30	ENSPVAG00000003476	HNRNPUL2 (ENSPVAG00000003475) #32	GNG3 (ENSPVAG00000003474) #33	BSCL2 (ENSPVAG00000003473) #34	LRRN4CL (ENSPVAG00000003472) #35	UBXN1 (ENSPVAG00000003470) #36	UQCC3 (ENSPVAG00000003469) #37	CSKMT (ENSPVAG00000003467)
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00940000155031.d	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.c ##8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b.b #18	ENSGT01080000257483 #19	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589 #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639 #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Greater horseshoe bat	MODERN SPECIES	2	MARK2 (ENSRFEG00010009280)	SPINDOC (ENSRFEG00010009495)	ZFTA (ENSRFEG00010009546)	RTN3 (ENSRFEG00010009595)	ATL3 (ENSRFEG00010009831) #7	ENSRFEG00010010034	ENSRFEG00010010178	LGALS12 (ENSRFEG00010010237) #9	ENSRFEG00010010520 #10	SLC22A9 (ENSRFEG00010010675) #16	SLC22A8 (ENSRFEG00010010746) #17	SLC22A6 (ENSRFEG00010011255) #18	ENSRFEG00010011298 #19	CHRM1 (ENSRFEG00010011318) #20	SLC3A2 (ENSRFEG00010011338) #21	WDR74 (ENSRFEG00010011575) #22	STX5 (ENSRFEG00010011935) #24	NXF1 (ENSRFEG00010012033) #25	TMEM223 (ENSRFEG00010012090) #26	TMEM179B (ENSRFEG00010012153) #27	TAF6L (ENSRFEG00010012295) #28	POLR2G (ENSRFEG00010012342) #29	ZBTB3 (ENSRFEG00010012397) #30	TTC9C (ENSRFEG00010012416) #31	HNRNPUL2 (ENSRFEG00010012436) #32	GNG3 (ENSRFEG00010012628) #33	BSCL2 (ENSRFEG00010012669) #34	LRRN4CL (ENSRFEG00010012818) #35	UBXN1 (ENSRFEG00010012842) #36	UQCC3 (ENSRFEG00010012979) #37	CSKMT (ENSRFEG00010013001)
Microbat	MODERN SPECIES	1654																WDR74 (ENSMLUG00000011204) #22	STX5 (ENSMLUG00000011176) #24	NXF1 (ENSMLUG00000011131) #25	TMEM223 (ENSMLUG00000011118) #26	TMEM179B (ENSMLUG00000011104) #27	TAF6L (ENSMLUG00000011057) #28	ENSMLUG00000011039 #29	ZBTB3 (ENSMLUG00000011020) #30	TTC9C (ENSMLUG00000010981) #31	HNRNPUL2 (ENSMLUG00000000412) #32	BSCL2 (ENSMLUG00000024511) #34	UQCC3 (ENSMLUG00000024698) #37	UBXN1 (ENSMLUG00000000406) #36	CSKMT (ENSMLUG00000023559)	C11orf98 (ENSMLUG00000000396)	INTS5 (ENSMLUG00000000391)
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000162878	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589.h #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639.d #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00400000022873
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589.h #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000165941	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639.d #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Tenrec	MODERN SPECIES	2914																WDR74 (ENSETEG00000008292) #22
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985	ENSGT00600000084617	ENSGT00940000157482.d	ENSGT00940000158566 #7	ENSGT00940000154853.d #8	ENSGT00940000161499 #9	ENSGT00940000162436 #10	ENSGT00940000161239 #16	ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589.h #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161486 #30	ENSGT00940000165941	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639.d #34	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875
Hyrax	MODERN SPECIES	5147															SLC3A2 (ENSPCAG00000016773) #21	WDR74 (ENSPCAG00000016713) #22	STX5 (ENSPCAG00000016665) #24	NXF1 (ENSPCAG00000016580) #25	TMEM223 (ENSPCAG00000016554) #26	TMEM179B (ENSPCAG00000016531) #27	TAF6L (ENSPCAG00000016453) #28	POLR2G (ENSPCAG00000016408) #29
Elephant	MODERN SPECIES	532	RCOR2 (ENSLAFG00000006094)	MARK2 (ENSLAFG00000006072)	SPINDOC (ENSLAFG00000030919)	ZFTA (ENSLAFG00000020497)	RTN3 (ENSLAFG00000018325)	ATL3 (ENSLAFG00000018322) #7	PLAAT3 (ENSLAFG00000023290) #8	ENSLAFG00000008426 ##8	ENSLAFG00000011733 ##8	LGALS12 (ENSLAFG00000002946) #9	PLAAT5 (ENSLAFG00000021958) #10	SLC22A9 (ENSLAFG00000012501) #16	SLC22A8 (ENSLAFG00000004863) #17	SLC22A6 (ENSLAFG00000009174) #18	SLC3A2 (ENSLAFG00000018263) #21	WDR74 (ENSLAFG00000006790) #22	EML3 (ENSLAFG00000009937)	STX5 (ENSLAFG00000006788) #24	NXF1 (ENSLAFG00000006778) #25	TMEM223 (ENSLAFG00000023089) #26	TMEM179B (ENSLAFG00000006777) #27	TAF6L (ENSLAFG00000022526) #28	POLR2G (ENSLAFG00000004354) #29	TTC9C (ENSLAFG00000011732) #31	HNRNPUL2 (ENSLAFG00000005377) #32	GNG3 (ENSLAFG00000005381) #33	BSCL2 (ENSLAFG00000030634) #34	UBXN1 (ENSLAFG00000021809) #36	UQCC3 (ENSLAFG00000013152) #37	C11orf98 (ENSLAFG00000013149)	INTS5 (ENSLAFG00000005382)
Xenarthra	ANCESTRAL SPECIES	58												ENSGT00940000154901.C.b.e #17	ENSGT00940000157004.a.b #18	ENSGT00940000162301 #20	ENSGT00940000156646 #21	ENSGT00390000015119 #22	ENSGT01000000214440.C #24	ENSGT00390000007539.i.a #25	ENSGT00390000012589.h #26	ENSGT00510000048151 #27	ENSGT00640000091486.a #28	ENSGT00390000008975 #29	ENSGT00940000161805 #31	ENSGT00940000160376 #32	ENSGT01100000263497.B #33	ENSGT00390000011639.d #34	ENSGT00940000162696 #35	ENSGT00940000156457 #36	ENSGT00390000001930 #37	ENSGT00510000049875	ENSGT00400000022873
Armadillo	MODERN SPECIES	576											ENSDNOG00000034059 #18	SLC22A8 (ENSDNOG00000040520) #17	ENSDNOG00000035908 #18	CHRM1 (ENSDNOG00000033696) #20	SLC3A2 (ENSDNOG00000035768) #21	WDR74 (ENSDNOG00000043582) #22	ENSDNOG00000005008 #24	NXF1 (ENSDNOG00000024303) #25	TMEM223 (ENSDNOG00000003066) #26	TMEM179B (ENSDNOG00000045983) #27	ENSDNOG00000031631 #28	POLR2G (ENSDNOG00000043426) #29	ENSDNOG00000012208	ENSDNOG00000043011 #30	TTC9C (ENSDNOG00000006523) #31	HNRNPUL2 (ENSDNOG00000006508) #32	GNG3 (ENSDNOG00000006502) #33	BSCL2 (ENSDNOG00000045976) #34	UBXN1 (ENSDNOG00000002776) #36	UQCC3 (ENSDNOG00000002774) #37	ENSDNOG00000002773
Sloth	MODERN SPECIES	4821																ENSCHOG00000003247 #22	STX5 (ENSCHOG00000003235) #24