Euteleostomi ANCESTRAL SPECIES 152 ENSGT00390000012692 ENSGT01030000234648.a.b.a.b ENSGT00390000002062 ENSGT00940000155317.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT01030000234637.b.c ENSGT00940000159855 Sarcopterygii ANCESTRAL SPECIES 277 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT01030000234637.b.c ENSGT00940000159855 Tetrapoda ANCESTRAL SPECIES 290 ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000163880 ENSGT00940000159128 #22 ENSGT00940000161156 Amniota ANCESTRAL SPECIES 40 ENSGT00950000185120 ENSGT00940000159667 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000162821 ENSGT00890000139436.A.b ENSGT00390000013859 ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000163880 ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b Mammalia ANCESTRAL SPECIES 46 ENSGT00940000159855 ENSGT01030000234637.b.c ENSGT00940000153629.a.b ENSGT00940000158528 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00530000063715.a ENSGT00940000159173 ENSGT00940000161233 ENSGT00730000110895.b.b ENSGT00940000160063 ENSGT00940000153634.a ENSGT00390000017639 ENSGT01030000234648.a.b.a.b ENSGT00390000002062 ENSGT00940000155317.a.a ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00390000017352 Theria ANCESTRAL SPECIES 50 ENSGT01030000234637.b.c ENSGT00940000153629.a.b ENSGT00940000158528 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000162057 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 Eutheria ANCESTRAL SPECIES 73 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000186231 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 Primates ANCESTRAL SPECIES 9 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Haplorrhini ANCESTRAL SPECIES 48 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT00390000011897 Simiiformes ANCESTRAL SPECIES 35 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT01030000237994 ENSGT00530000063168.a.b #34 ENSGT00940000157161.b #33 ENSGT00910000146838 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000154281.m.b.a.a.a.b ENSGT00910000147384 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Hominidae ANCESTRAL SPECIES 10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000154281.m.b.a.a.a.b ENSGT00910000147384 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a Orangutan MODERN SPECIES 22 SPTLC1 (ENSPPYG00000019371) #7 ROR2 (ENSPPYG00000019370) #8 NFIL3 (ENSPPYG00000019368) #9 AUH (ENSPPYG00000019367) #10 SYK (ENSPPYG00000019366) #11 DIRAS2 (ENSPPYG00000019365) #12 GADD45G (ENSPPYG00000036630) #13 SEMA4D (ENSPPYG00000019360) #14 SECISBP2 (ENSPPYG00000019359) #15 CKS2 (ENSPPYG00000025843) #16 SHC3 (ENSPPYG00000019358) #17 S1PR3 (ENSPPYG00000029782) #18 ENSPPYG00000019357 #19 ENSPPYG00000019356 #20 SPIN1 (ENSPPYG00000019355) #21 CDK20 (ENSPPYG00000019353) #22 ENSPPYG00000036547 #23 ENSPPYG00000041393 #24 ENSPPYG00000019351 #25 ENSPPYG00000029367 #26 ENSPPYG00000038385 #27 FGD3 (ENSPPYG00000019384) #28 ZNF484 (ENSPPYG00000019350) #29 SUSD3 (ENSPPYG00000019383) #30 CARD19 (ENSPPYG00000019386) #31 ENSPPYG00000019387 #32 WNK2 (ENSPPYG00000019388) #33 ENSPPYG00000019389 #34 FAM120AOS (ENSPPYG00000019390) #35 FAM120A (ENSPPYG00000019391) #36 PHF2 (ENSPPYG00000019392) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00950000182964.a.b.a #13 ENSGT00940000154281.m.b.a.a.a.b ENSGT00910000147384 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00390000017838.d ENSGT00940000156453.a.c.b ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a Gorilla MODERN SPECIES 35 CDK20 (ENSGGOG00000024184) #22 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000154281.m.b.a.a.a.b ENSGT00910000147384 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00390000017838.d ENSGT00940000156453.a.c.b ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Pan ANCESTRAL SPECIES 75 ENSGT00940000159128 #22 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.a #27 Chimpanzee MODERN SPECIES 22 ENSPTRG00000049468 ENSPTRG00000045150 SEMA4D (ENSPTRG00000022584) #14 SECISBP2 (ENSPTRG00000021094) #15 CKS2 (ENSPTRG00000021093) #16 SHC3 (ENSPTRG00000045506) #17 ENSPTRG00000052005 ENSPTRG00000042984 S1PR3 (ENSPTRG00000034511) #18 C9H9orf47 (ENSPTRG00000029228) #19 NXNL2 (ENSPTRG00000021089) #20 SPIN1 (ENSPTRG00000021088) #21 ENSPTRG00000018839 ENSPTRG00000046200 ENSPTRG00000049097 #23 CDK20 (ENSPTRG00000021084) #22 ENSPTRG00000048803 #27 SPATA31E1 (ENSPTRG00000021083) ##27 ENSPTRG00000044081 CTSL (ENSPTRG00000021080) DAPK1 (ENSPTRG00000023384) ENSPTRG00000044565 ENSPTRG00000021078 GAS1 (ENSPTRG00000045567) ENSPTRG00000048080 TUT7 (ENSPTRG00000021076) ENSPTRG00000048110 ENSPTRG00000043836 AQP7B (ENSPTRG00000020859) C9H9orf153 (ENSPTRG00000029236) GOLM1 (ENSPTRG00000021072) Bonobo MODERN SPECIES 22 SLC28A3 (ENSPPAG00000037370) NTRK2 (ENSPPAG00000037720) AGTPBP1 (ENSPPAG00000043950) ISCA1 (ENSPPAG00000039216) TUT7 (ENSPPAG00000038548) ENSPPAG00000028081 GAS1 (ENSPPAG00000040805) ENSPPAG00000006348 DAPK1 (ENSPPAG00000036602) CTSL (ENSPPAG00000030463) ENSPPAG00000034286 ENSPPAG00000037489 SPATA31E1 (ENSPPAG00000026411) ##27 ENSPPAG00000005637 #23 ENSPPAG00000007240 CDK20 (ENSPPAG00000036346) #22 ENSPPAG00000018138 #27 ENSPPAG00000026596 ENSPPAG00000010779 SPIN1 (ENSPPAG00000028912) #21 NXNL2 (ENSPPAG00000039010) #20 ENSPPAG00000041628 #19 S1PR3 (ENSPPAG00000034913) #18 ENSPPAG00000037790 ENSPPAG00000039201 SHC3 (ENSPPAG00000028494) #17 ENSPPAG00000042896 #16 SECISBP2 (ENSPPAG00000012385) #15 SEMA4D (ENSPPAG00000002189) #14 ENSPPAG00000035402 ENSPPAG00000036035 Human MODERN SPECIES 21 SPTLC1 (ENSG00000090054) #7 ROR2 (ENSG00000169071) #8 NFIL3 (ENSG00000165030) #9 AUH (ENSG00000148090) #10 SYK (ENSG00000165025) #11 DIRAS2 (ENSG00000165023) #12 GADD45G (ENSG00000130222) #13 SEMA4D (ENSG00000187764) #14 SECISBP2 (ENSG00000187742) #15 CKS2 (ENSG00000123975) ##16 SHC3 (ENSG00000148082) #17 S1PR3 (ENSG00000213694) #18 NXNL2 (ENSG00000130045) #20 SPIN1 (ENSG00000106723) #21 SPATA31C2 (ENSG00000177910) #27 CDK20 (ENSG00000156345) #22 ENSG00000283205 #23 SPATA31C1 (ENSG00000230246) #27 SPATA31E1 (ENSG00000177992) ##27 CTSL (ENSG00000135047) DAPK1 (ENSG00000196730) GAS1 (ENSG00000180447) TUT7 (ENSG00000083223) ISCA1 (ENSG00000135070) C9orf153 (ENSG00000187753) GOLM1 (ENSG00000135052) NAA35 (ENSG00000135040) AGTPBP1 (ENSG00000135049) NTRK2 (ENSG00000148053) SLC28A3 (ENSG00000197506) RMI1 (ENSG00000178966) Gibbon MODERN SPECIES 10 GADD45G (ENSNLEG00000000452) #13 ENSNLEG00000000449 ENSNLEG00000033615 SEMA4D (ENSNLEG00000000397) #14 SECISBP2 (ENSNLEG00000008739) #15 CKS2 (ENSNLEG00000032243) ##16 SHC3 (ENSNLEG00000029655) #17 S1PR3 (ENSNLEG00000008685) #18 ENSNLEG00000029747 ENSNLEG00000035039 #19 ENSNLEG00000030504 ENSNLEG00000004281 NXNL2 (ENSNLEG00000005444) #20 SPIN1 (ENSNLEG00000035232) #21 ENSNLEG00000027358 CDK20 (ENSNLEG00000005434) #22 ENSNLEG00000035327 CTSL (ENSNLEG00000005327) DAPK1 (ENSNLEG00000005244) ENSNLEG00000036213 TUT7 (ENSNLEG00000005138) ISCA1 (ENSNLEG00000031606) ENSNLEG00000005127 GOLM1 (ENSNLEG00000003785) NAA35 (ENSNLEG00000003793) ENSNLEG00000033935 ENSNLEG00000028632 AGTPBP1 (ENSNLEG00000003752) NTRK2 (ENSNLEG00000003678) SLC28A3 (ENSNLEG00000003626) RMI1 (ENSNLEG00000003625) Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a Macaca ANCESTRAL SPECIES 10 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a Pig-tailed macaque MODERN SPECIES 272 DIRAS2 (ENSMNEG00000003176) #12 ENSMNEG00000012312 GADD45G (ENSMNEG00000042753) #13 SEMA4D (ENSMNEG00000033475) #14 SECISBP2 (ENSMNEG00000031737) #15 CKS2 (ENSMNEG00000032033) #16 SHC3 (ENSMNEG00000036450) #17 ENSMNEG00000018696 S1PR3 (ENSMNEG00000007167) #18 ENSMNEG00000031176 #19 ENSMNEG00000037607 NXNL2 (ENSMNEG00000014676) #20 SPIN1 (ENSMNEG00000038251) #21 ENSMNEG00000014068 ENSMNEG00000043228 CDK20 (ENSMNEG00000034650) #22 ENSMNEG00000032591 CTSL (ENSMNEG00000042546) DAPK1 (ENSMNEG00000044385) ENSMNEG00000043846 GAS1 (ENSMNEG00000010226) TUT7 (ENSMNEG00000031427) ISCA1 (ENSMNEG00000030750) ENSMNEG00000028422 GOLM1 (ENSMNEG00000044908) NAA35 (ENSMNEG00000020190) ENSMNEG00000031442 AGTPBP1 (ENSMNEG00000027437) NTRK2 (ENSMNEG00000029886) SLC28A3 (ENSMNEG00000036156) HNRNPK (ENSMNEG00000044879) Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000153947.A #8 ENSGT00940000166673.d.a.a.a.b ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT00910000147291 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000154259.l.c.a.b.a ENSGT00940000156859 ENSGT00490000043385.v ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a ENSGT00390000002374 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000055435 ROR2 (ENSMFAG00000031014) #8 ENSMFAG00000054204 NFIL3 (ENSMFAG00000009757) #9 AUH (ENSMFAG00000003934) #10 SYK (ENSMFAG00000033243) #11 DIRAS2 (ENSMFAG00000060966) #12 SHC3 (ENSMFAG00000041328) #17 ENSMFAG00000054454 S1PR3 (ENSMFAG00000004814) #18 NXNL2 (ENSMFAG00000045135) #20 SPIN1 (ENSMFAG00000002525) #21 ENSMFAG00000058644 ENSMFAG00000013877 ENSMFAG00000052795 CDK20 (ENSMFAG00000043443) #22 ENSMFAG00000037467 ENSMFAG00000050654 CTSL (ENSMFAG00000045668) ENSMFAG00000056529 DAPK1 (ENSMFAG00000037117) ENSMFAG00000027241 TUT7 (ENSMFAG00000000971) ENSMFAG00000057265 ENSMFAG00000002021 ISCA1 (ENSMFAG00000038304) GOLM1 (ENSMFAG00000043796) NAA35 (ENSMFAG00000041931) AGTPBP1 (ENSMFAG00000039578) NTRK2 (ENSMFAG00000045094) ENSMFAG00000056127 Rhesus MODERN SPECIES 6 ENSMMUG00000061473 NFIL3 (ENSMMUG00000023257) #9 ENSMMUG00000047234 AUH (ENSMMUG00000015798) #10 SYK (ENSMMUG00000001748) #11 DIRAS2 (ENSMMUG00000007223) #12 GADD45G (ENSMMUG00000048737) #13 SEMA4D (ENSMMUG00000008629) #14 SECISBP2 (ENSMMUG00000012532) #15 CKS2 (ENSMMUG00000064761) #16 SHC3 (ENSMMUG00000039355) #17 S1PR3 (ENSMMUG00000043913) #18 ENSMMUG00000049479 NXNL2 (ENSMMUG00000008414) #20 SPIN1 (ENSMMUG00000016295) #21 CDK20 (ENSMMUG00000010438) #22 ENSMMUG00000013517 CTSL (ENSMMUG00000017609) DAPK1 (ENSMMUG00000017053) ENSMMUG00000060761 ENSMMUG00000059207 GAS1 (ENSMMUG00000062912) ENSMMUG00000003411 TUT7 (ENSMMUG00000003401) ISCA1 (ENSMMUG00000003399) C15H9orf153 (ENSMMUG00000058481) GOLM1 (ENSMMUG00000001900) NAA35 (ENSMMUG00000001898) AGTPBP1 (ENSMMUG00000008801) NTRK2 (ENSMMUG00000023117) SLC28A3 (ENSMMUG00000008685) Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00510000046985.h.b.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Olive baboon MODERN SPECIES 4 AUH (ENSPANG00000024805) #10 SYK (ENSPANG00000024803) #11 DIRAS2 (ENSPANG00000003753) #12 ENSPANG00000046714 GADD45G (ENSPANG00000039784) #13 SEMA4D (ENSPANG00000024874) #14 SECISBP2 (ENSPANG00000024873) #15 SHC3 (ENSPANG00000024872) #17 S1PR3 (ENSPANG00000000294) #18 NXNL2 (ENSPANG00000042917) #20 SPIN1 (ENSPANG00000024896) #21 ENSPANG00000043424 ENSPANG00000033303 ENSPANG00000050659 ENSPANG00000043828 CDK20 (ENSPANG00000024895) #22 ENSPANG00000024894 CTSL (ENSPANG00000024640) DAPK1 (ENSPANG00000024892) ENSPANG00000042494 ENSPANG00000045591 GAS1 (ENSPANG00000024891) TUT7 (ENSPANG00000024890) ISCA1 (ENSPANG00000024889) ENSPANG00000040510 GOLM1 (ENSPANG00000024888) NAA35 (ENSPANG00000024887) AGTPBP1 (ENSPANG00000024885) NTRK2 (ENSPANG00000024884) SLC28A3 (ENSPANG00000024883) RMI1 (ENSPANG00000041381) Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT00950000182964.a.b.a #13 ENSGT00940000154281.m.b.a.a.a.b ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT01000000215830 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00510000046985.h.b.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b.s.b ENSGT00940000154367.b.g ENSGT00940000153424.a.b ENSGT00940000155689.d ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385.u.b ENSGT00940000164155 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000153434.a.a ENSGT00390000002374 Sooty mangabey MODERN SPECIES 629 GADD45G (ENSCATG00000041187) #13 ENSCATG00000012439 SEMA4D (ENSCATG00000044690) #14 SECISBP2 (ENSCATG00000008304) #15 CKS2 (ENSCATG00000036628) #16 SHC3 (ENSCATG00000043648) #17 S1PR3 (ENSCATG00000005549) #18 ENSCATG00000022256 ENSCATG00000030800 #19 NXNL2 (ENSCATG00000038968) #20 SPIN1 (ENSCATG00000030976) #21 ENSCATG00000016774 ENSCATG00000011713 CDK20 (ENSCATG00000016899) #22 ENSCATG00000010556 CTSL (ENSCATG00000044799) DAPK1 (ENSCATG00000033936) ENSCATG00000042393 GAS1 (ENSCATG00000011030) TUT7 (ENSCATG00000032888) ISCA1 (ENSCATG00000042807) C9orf153 (ENSCATG00000042082) ENSCATG00000033608 NAA35 (ENSCATG00000042793) ENSCATG00000001301 AGTPBP1 (ENSCATG00000044576) NTRK2 (ENSCATG00000040423) ENSCATG00000000743 SLC28A3 (ENSCATG00000044611) Drill MODERN SPECIES 500 GADD45G (ENSMLEG00000031770) #13 ENSMLEG00000037750 SEMA4D (ENSMLEG00000037083) #14 SECISBP2 (ENSMLEG00000028868) #15 CKS2 (ENSMLEG00000035685) #16 SHC3 (ENSMLEG00000004268) #17 S1PR3 (ENSMLEG00000028481) #18 ENSMLEG00000010964 NXNL2 (ENSMLEG00000033545) #20 SPIN1 (ENSMLEG00000035080) #21 ENSMLEG00000000797 ENSMLEG00000044314 CDK20 (ENSMLEG00000035229) #22 ENSMLEG00000035282 CTSL (ENSMLEG00000036785) DAPK1 (ENSMLEG00000033258) TUT7 (ENSMLEG00000027049) ISCA1 (ENSMLEG00000038112) C9orf153 (ENSMLEG00000013492) ENSMLEG00000042000 Vervet Monkey MODERN SPECIES 3 SPTLC1 (ENSCSAG00000007251) #7 ENSCSAG00000007257 ROR2 (ENSCSAG00000007262) #8 NFIL3 (ENSCSAG00000018511) #9 AUH (ENSCSAG00000007270) #10 SYK (ENSCSAG00000007280) #11 DIRAS2 (ENSCSAG00000018509) #12 GADD45G (ENSCSAG00000007287) #13 SEMA4D (ENSCSAG00000007299) #14 SECISBP2 (ENSCSAG00000007310) #15 ENSCSAG00000007319 #16 SHC3 (ENSCSAG00000007327) #17 S1PR3 (ENSCSAG00000018507) #18 NXNL2 (ENSCSAG00000007331) #20 SPIN1 (ENSCSAG00000007339) #21 CDK20 (ENSCSAG00000007347) #22 ENSCSAG00000007375 CTSL (ENSCSAG00000007387) DAPK1 (ENSCSAG00000007395) GAS1 (ENSCSAG00000018505) TUT7 (ENSCSAG00000007408) ISCA1 (ENSCSAG00000007415) C9orf153 (ENSCSAG00000007422) GOLM1 (ENSCSAG00000007433) NAA35 (ENSCSAG00000007444) AGTPBP1 (ENSCSAG00000007472) NTRK2 (ENSCSAG00000007484) SLC28A3 (ENSCSAG00000007516) RMI1 (ENSCSAG00000018503) ENSCSAG00000007560 C9orf64 (ENSCSAG00000007582) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000159128 #22 Black snub-nosed monkey MODERN SPECIES 2095 CDK20 (ENSRBIG00000026598) #22 Golden snub-nosed monkey MODERN SPECIES 691 CDK20 (ENSRROG00000029181) #22 ENSRROG00000044206 ENSRROG00000017930 CTSL (ENSRROG00000038398) DAPK1 (ENSRROG00000043192) ENSRROG00000035540 TUT7 (ENSRROG00000034432) ISCA1 (ENSRROG00000036259) C9orf153 (ENSRROG00000042498) ENSRROG00000035077 Platyrrhini ANCESTRAL SPECIES 50 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT01030000237994 ENSGT00530000063168.a.b #34 ENSGT00940000157161.b #33 ENSGT00910000146838 ENSGT00940000158892.b #32 ENSGT00390000016408.a #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 Mas night monkey MODERN SPECIES 581 ENSANAG00000036499 GADD45G (ENSANAG00000021164) #13 SEMA4D (ENSANAG00000022806) #14 SECISBP2 (ENSANAG00000028208) #15 SHC3 (ENSANAG00000030272) #17 ENSANAG00000019607 S1PR3 (ENSANAG00000019414) #18 ENSANAG00000024256 #19 NXNL2 (ENSANAG00000024469) #20 SPIN1 (ENSANAG00000029469) #21 ENSANAG00000032051 ENSANAG00000025243 ENSANAG00000034459 ENSANAG00000022939 ENSANAG00000025700 CDK20 (ENSANAG00000033129) #22 ZNF169 (ENSANAG00000030924) ENSANAG00000031218 PTPDC1 (ENSANAG00000022660) BARX1 (ENSANAG00000025328) PHF2 (ENSANAG00000027644) #37 FAM120A (ENSANAG00000005846) #36 ENSANAG00000032358 #34 WNK2 (ENSANAG00000023375) #33 NINJ1 (ENSANAG00000035470) #32 CARD19 (ENSANAG00000036585) #31 SUSD3 (ENSANAG00000030750) #30 CTSL (ENSANAG00000022110) DAPK1 (ENSANAG00000032154) ENSANAG00000008506 ENSANAG00000034385 Cebidae ANCESTRAL SPECIES 43 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.t.h ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT01030000237994 ENSGT00530000063168.a.b #34 ENSGT00940000157161.b #33 ENSGT00910000146838 ENSGT00940000158892.b #32 ENSGT00390000016408.a #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 Cebidae_a ANCESTRAL SPECIES 106 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00930000151016.u.a ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00620000088704 #19 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00410000025793.b.t.h ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 ENSGT01030000237994 ENSGT00530000063168.a.b #34 ENSGT00940000157161.b #33 ENSGT00910000146838 ENSGT00940000158892.b #32 ENSGT00390000016408.a #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 Bolivian squirrel monkey MODERN SPECIES 140 ENSSBOG00000022427 ENSSBOG00000000871 DIRAS2 (ENSSBOG00000016847) #12 ENSSBOG00000020239 ENSSBOG00000032778 ENSSBOG00000031817 GADD45G (ENSSBOG00000026492) #13 SEMA4D (ENSSBOG00000028921) #14 SECISBP2 (ENSSBOG00000015392) #15 CKS2 (ENSSBOG00000030978) #16 SHC3 (ENSSBOG00000034613) #17 S1PR3 (ENSSBOG00000018337) #18 ENSSBOG00000031185 #19 NXNL2 (ENSSBOG00000022815) #20 SPIN1 (ENSSBOG00000032734) #21 CDK20 (ENSSBOG00000000634) #22 ZNF169 (ENSSBOG00000028455) PTPDC1 (ENSSBOG00000004417) ENSSBOG00000032959 PHF2 (ENSSBOG00000032633) #37 FAM120A (ENSSBOG00000028151) #36 ENSSBOG00000031256 ENSSBOG00000030330 #34 WNK2 (ENSSBOG00000025266) #33 ENSSBOG00000033994 NINJ1 (ENSSBOG00000027212) #32 CARD19 (ENSSBOG00000019116) #31 SUSD3 (ENSSBOG00000026433) #30 FGD3 (ENSSBOG00000030603) #28 ZNF510 (ENSSBOG00000028269) ENSSBOG00000002057 Capuchin MODERN SPECIES 53 SPATA31E1 (ENSCCAG00000035735) ##27 GADD45G (ENSCCAG00000035443) #13 SEMA4D (ENSCCAG00000007872) #14 SECISBP2 (ENSCCAG00000013350) #15 CKS2 (ENSCCAG00000019936) #16 SHC3 (ENSCCAG00000025034) #17 S1PR3 (ENSCCAG00000016134) #18 ENSCCAG00000021120 #19 NXNL2 (ENSCCAG00000034827) #20 ENSCCAG00000002548 SPIN1 (ENSCCAG00000033606) #21 ENSCCAG00000010497 ENSCCAG00000028773 ENSCCAG00000030560 ENSCCAG00000023977 CDK20 (ENSCCAG00000032198) #22 ENSCCAG00000034271 ZNF169 (ENSCCAG00000018084) ENSCCAG00000026426 ENSCCAG00000017783 PTPDC1 (ENSCCAG00000032858) BARX1 (ENSCCAG00000026395) Marmoset DUPLICATION Marmoset MODERN SPECIES DIRAS2 (ENSCJAG00000039042) #12 ENSCJAG00000051243 ENSCJAG00000072229 ENSCJAG00000005635 DAPK1 (ENSCJAG00000005569) ENSCJAG00000074564 GAS1 (ENSCJAG00000062210) ENSCJAG00000084670 ZNF484 (ENSCJAG00000005536) #29 PRXL2C (ENSCJAG00000076685) ENSCJAG00000061833 ENSCJAG00000012598 HABP4 (ENSCJAG00000012589) ENSCJAG00000040778 SLC35D2 (ENSCJAG00000012556) ENSCJAG00000047796 #22 ENSCJAG00000064535 CTSV (ENSCJAG00000046004) ENSCJAG00000067353 ENSCJAG00000076862 ENSCJAG00000075286 FBP2 (ENSCJAG00000021334) FBP1 (ENSCJAG00000041493) AOPEP (ENSCJAG00000021327) FANCC (ENSCJAG00000021324) PTCH1 (ENSCJAG00000021318) ERCC6L2 (ENSCJAG00000043554) ENSCJAG00000055424 HSD17B3 (ENSCJAG00000008899) ENSCJAG00000080940 ENSCJAG00000055940 Marmoset MODERN SPECIES ENSCJAG00000005695 #10 NFIL3 (ENSCJAG00000005728) #9 ENSCJAG00000073981 ENSCJAG00000086138 GADD45G (ENSCJAG00000075792) #13 SEMA4D (ENSCJAG00000007883) #14 SECISBP2 (ENSCJAG00000007806) #15 CKS2 (ENSCJAG00000082907) #16 SHC3 (ENSCJAG00000011207) #17 S1PR3 (ENSCJAG00000045198) #18 ENSCJAG00000045436 NXNL2 (ENSCJAG00000040941) #20 SPIN1 (ENSCJAG00000038940) #21 ENSCJAG00000035362 ENSCJAG00000072273 ENSCJAG00000042138 #22 ENSCJAG00000008312 ENSCJAG00000070221 ENSCJAG00000075853 ENSCJAG00000069607 BARX1 (ENSCJAG00000045992) PTPDC1 (ENSCJAG00000017408) PHF2 (ENSCJAG00000017343) #37 ENSCJAG00000076126 FAM120A (ENSCJAG00000011461) #36 ENSCJAG00000081947 WNK2 (ENSCJAG00000011431) #33 NINJ1 (ENSCJAG00000071616) #32 CARD19 (ENSCJAG00000046539) #31 SUSD3 (ENSCJAG00000041233) #30 ENSCJAG00000068886 Tarsier MODERN SPECIES 7072 CDK20 (ENSTSYG00000026812) #22 Strepsirrhini ANCESTRAL SPECIES 50 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C.ib #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.b #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00940000157345.a ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00390000001747 #35 Lemuriformes ANCESTRAL SPECIES 101 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 Mouse lemur MODERN SPECIES 1 MFSD14B (ENSMICG00000013141) ENSMICG00000046897 ENSMICG00000028181 ZNF484 (ENSMICG00000009252) #29 ENSMICG00000030968 ENSMICG00000028276 ENSMICG00000028834 ZNF658 (ENSMICG00000042550) ENSMICG00000033419 ENSMICG00000033450 ENSMICG00000029296 FAM240B (ENSMICG00000038032) CTSV (ENSMICG00000008715) ZNF782 (ENSMICG00000014905) PRXL2C (ENSMICG00000032554) CDK20 (ENSMICG00000002945) #22 ENSMICG00000003697 ZNF169 (ENSMICG00000003159) PTPDC1 (ENSMICG00000006876) BARX1 (ENSMICG00000045287) PHF2 (ENSMICG00000011463) #37 ENSMICG00000011445 #36 ENSMICG00000029452 SPIN1 (ENSMICG00000048058) #21 NXNL2 (ENSMICG00000045442) #20 SHC3 (ENSMICG00000036874) #17 CKS2 (ENSMICG00000043815) #16 SECISBP2 (ENSMICG00000001176) #15 SEMA4D (ENSMICG00000001178) #14 GADD45G (ENSMICG00000030733) #13 ENSMICG00000029651 Lemuriformes_a ANCESTRAL SPECIES 331 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00410000025793.b Coquerels sifaka MODERN SPECIES 572 SPIN1 (ENSPCOG00000004155) #21 NXNL2 (ENSPCOG00000019921) #20 SHC3 (ENSPCOG00000021660) #17 CKS2 (ENSPCOG00000013677) ##16 SECISBP2 (ENSPCOG00000013354) #15 SEMA4D (ENSPCOG00000017188) #14 GADD45G (ENSPCOG00000021885) #13 CDK20 (ENSPCOG00000016741) #22 DIRAS2 (ENSPCOG00000025657) #12 SYK (ENSPCOG00000016095) #11 AUH (ENSPCOG00000021486) #10 ROR2 (ENSPCOG00000017693) #8 SPTLC1 (ENSPCOG00000018626) #7 Greater bamboo lemur MODERN SPECIES 1525 ENSPSMG00000008128 ENSPSMG00000008138 CDK20 (ENSPSMG00000008282) #22 ENSPSMG00000008334 #23 ENSPSMG00000008350 Bushbaby MODERN SPECIES 203 NFIL3 (ENSOGAG00000011750) #9 ENSOGAG00000032987 AUH (ENSOGAG00000011749) #10 SYK (ENSOGAG00000011743) #11 DIRAS2 (ENSOGAG00000001184) #12 ENSOGAG00000032500 GADD45G (ENSOGAG00000002142) #13 ENSOGAG00000032473 SEMA4D (ENSOGAG00000000321) #14 SECISBP2 (ENSOGAG00000000317) #15 CKS2 (ENSOGAG00000028843) #16 SHC3 (ENSOGAG00000011519) #17 S1PR3 (ENSOGAG00000011514) #18 NXNL2 (ENSOGAG00000002167) #20 SPIN1 (ENSOGAG00000002166) #21 CDK20 (ENSOGAG00000008726) #22 ENSOGAG00000012304 ENSOGAG00000027205 ZNF169 (ENSOGAG00000001828) PTPDC1 (ENSOGAG00000006733) BARX1 (ENSOGAG00000003345) ENSOGAG00000028712 PHF2 (ENSOGAG00000025710) #37 FAM120A (ENSOGAG00000031505) #36 ENSOGAG00000011866 #35 ENSOGAG00000029124 ENSOGAG00000024737 ENSOGAG00000017058 ZNF510 (ENSOGAG00000004170) ZNF782 (ENSOGAG00000005589) ENSOGAG00000003992 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Tree shrew MODERN SPECIES 2761 ENSTBEG00000006725 #22 Glires ANCESTRAL SPECIES 9 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Rodentia ANCESTRAL SPECIES 9 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00950000183043.a.b.b.a.a.b ##27 Rodentia_B ANCESTRAL SPECIES 47 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00950000183043.a.b.b.a.a.b ##27 ENSGT00940000159128 #22 Kangaroo rat MODERN SPECIES 387 Secisbp2 (ENSDORG00000023182) #15 Cks2 (ENSDORG00000025122) #16 Shc3 (ENSDORG00000005451) #17 S1pr3 (ENSDORG00000005450) #18 Nxnl2 (ENSDORG00000027507) #20 Spin1 (ENSDORG00000024025) #21 ENSDORG00000024611 Cdk20 (ENSDORG00000010071) #22 Fbxw17 (ENSDORG00000024927) ENSDORG00000029609 ENSDORG00000000194 ENSDORG00000024904 Fam20c (ENSDORG00000025058) Foxl3 (ENSDORG00000025977) Pdgfa (ENSDORG00000003423) Prkar1b (ENSDORG00000003308) Dnaaf5 (ENSDORG00000005805) Sun1 (ENSDORG00000002734) Get4 (ENSDORG00000001525) Adap1 (ENSDORG00000001528) Cox19 (ENSDORG00000002092) Cyp2w1 (ENSDORG00000002093) 3110082I17Rik (ENSDORG00000024094) Myomorpha ANCESTRAL SPECIES ENSGT00940000159128 #22 Lesser Egyptian jerboa MODERN SPECIES 130 Pcolce (ENSJJAG00000020878) Fbxo24 (ENSJJAG00000023628) ENSJJAG00000022701 Nyap1 (ENSJJAG00000019668) Mepce (ENSJJAG00000010924) Pvrig (ENSJJAG00000016575) Stag3 (ENSJJAG00000020500) Gpc2 (ENSJJAG00000000569) ENSJJAG00000011919 Mblac1 (ENSJJAG00000015290) Cnpy4 (ENSJJAG00000018233) Taf6 (ENSJJAG00000001625) Ap4m1 (ENSJJAG00000010248) ENSJJAG00000016593 Zscan21 (ENSJJAG00000007135) Cdk20 (ENSJJAG00000003338) #22 Azgp1 (ENSJJAG00000017331) Gjc3 (ENSJJAG00000019066) Cyp3a13 (ENSJJAG00000020062) ENSJJAG00000013680 Zscan25 (ENSJJAG00000021006) Zfp655 (ENSJJAG00000023740) Fam20c (ENSJJAG00000023831) Foxl3 (ENSJJAG00000004051) Pdgfa (ENSJJAG00000016185) Prkar1b (ENSJJAG00000020582) Dnaaf5 (ENSJJAG00000010891) Sun1 (ENSJJAG00000022626) Get4 (ENSJJAG00000012689) Adap1 (ENSJJAG00000017559) ENSJJAG00000019022 Muroidea ANCESTRAL SPECIES ENSGT00940000159128 #22 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 Golden Hamster MODERN SPECIES 699 Cts8 (ENSMAUG00000018878) ENSMAUG00000016362 Fbp2 (ENSMAUG00000017596) Fbp1 (ENSMAUG00000015819) Aopep (ENSMAUG00000003279) Fancc (ENSMAUG00000012407) Ptch1 (ENSMAUG00000014816) Ercc6l2 (ENSMAUG00000004820) Hsd17b3 (ENSMAUG00000018759) Slc35d2 (ENSMAUG00000016504) Zfp367 (ENSMAUG00000019699) Habp4 (ENSMAUG00000020977) Cdc14b (ENSMAUG00000002176) Prxl2c (ENSMAUG00000007262) Ctsv (ENSMAUG00000000661) Cdk20 (ENSMAUG00000001239) #22 Fam240b (ENSMAUG00000003441) Cntnap3 (ENSMAUG00000002315) Spata31 (ENSMAUG00000018558) #27 Spata31d1c (ENSMAUG00000020041) ##27 Prss47 (ENSMAUG00000001035) Mfsd14b (ENSMAUG00000001438) Chinese hamster chok1gshd MODERN SPECIES 317 Fbp2 (ENSCGRG00001022515) Fbp1 (ENSCGRG00001009150) Aopep (ENSCGRG00001012713) Fancc (ENSCGRG00001013491) Ptch1 (ENSCGRG00001010176) ENSCGRG00001008618 ENSCGRG00001022738 Hsd17b3 (ENSCGRG00001009870) Slc35d2 (ENSCGRG00001020192) Zfp367 (ENSCGRG00001022531) Habp4 (ENSCGRG00001025040) Cdc14b (ENSCGRG00001019066) ENSCGRG00001002667 Prxl2c (ENSCGRG00001003859) Ctsl (ENSCGRG00001023416) Cdk20 (ENSCGRG00001001834) #22 Fam240b (ENSCGRG00001020040) Cntnap3 (ENSCGRG00001012388) Spata31 (ENSCGRG00001024965) #27 ENSCGRG00001000347 ##27 Prss47 (ENSCGRG00001011133) Mfsd14b (ENSCGRG00001016271) ENSCGRG00001003953 ENSCGRG00001024215 ENSCGRG00001012071 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b Prairie vole MODERN SPECIES 201 Ercc6l2 (ENSMOCG00000019362) Hsd17b3 (ENSMOCG00000014078) Slc35d2 (ENSMOCG00000017626) Zfp367 (ENSMOCG00000005924) Habp4 (ENSMOCG00000015678) Cdc14b (ENSMOCG00000011367) Prxl2c (ENSMOCG00000001857) ENSMOCG00000012435 Cdk20 (ENSMOCG00000000538) #22 Fam240b (ENSMOCG00000009158) Spata31 (ENSMOCG00000002879) #27 Prss47 (ENSMOCG00000013963) Mfsd14b (ENSMOCG00000000124) ENSMOCG00000000793 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000020678 Fbp2 (ENSPEMG00000003200) Fbp1 (ENSPEMG00000020415) Aopep (ENSPEMG00000011169) Fancc (ENSPEMG00000022299) Ptch1 (ENSPEMG00000016117) ENSPEMG00000006631 Hsd17b3 (ENSPEMG00000021000) Slc35d2 (ENSPEMG00000021173) Zfp367 (ENSPEMG00000013770) ENSPEMG00000021224 Cdc14b (ENSPEMG00000020534) Prxl2c (ENSPEMG00000020672) ENSPEMG00000021037 Ctsl (ENSPEMG00000021285) Cdk20 (ENSPEMG00000023165) #22 Fam240b (ENSPEMG00000020614) ENSPEMG00000025407 ENSPEMG00000009179 ##27 Prss47 (ENSPEMG00000024096) Mfsd14b (ENSPEMG00000006359) Or14p1 (ENSPEMG00000000696) Or9s18 (ENSPEMG00000006716) Murinae ANCESTRAL SPECIES 21 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b Mus ANCESTRAL SPECIES 18 ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b ENSGT00940000162284.e.b.a ENSGT00390000012916.t ENSGT00390000005801 ENSGT00530000063576.B ENSGT00940000155274.a.b.c.b Mus_A ANCESTRAL SPECIES 14 ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b ENSGT00940000162284.e.b.a ENSGT00390000012916.t ENSGT00390000005801 ENSGT00530000063576.B ENSGT00940000155274.a.b.c.b ENSGT00940000153165.a.a.c.a.h ENSGT00940000153165.a.b.a.a.a.b.b Mus_B ANCESTRAL SPECIES 13 ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b ENSGT00940000162284.e.b.a ENSGT00860000136162 ENSGT00940000162111.d ENSGT00390000012916.t ENSGT00390000011190.y.a ENSGT00390000005801 ENSGT00530000063576.B Mus_C ANCESTRAL SPECIES 10 ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153321.b.b.l.a ENSGT00940000159128 #22 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #27 ENSGT00950000183043.a.b.b.a.b.u.a.a ##27 ENSGT00940000157345.a ENSGT00940000156081 ENSGT01050000244828.c.b.b.b.c.b ENSGT01100000263494.a.a.a.a.b.b ENSGT00940000162284.e.b.a ENSGT00860000136162 ENSGT00940000162111.d ENSGT00390000012916.t ENSGT00390000011190.y.a ENSGT00390000005801 ENSGT00530000063576.B Steppe mouse MODERN SPECIES 3039 Ptch1 (ENSMSIG00000020849) Ercc6l2 (ENSMSIG00000021038) ENSMSIG00000021243 Hsd17b3 (ENSMSIG00000021249) Slc35d2 (ENSMSIG00000021264) Zfp367 (ENSMSIG00000021336) Habp4 (ENSMSIG00000021366) Cdc14b (ENSMSIG00000021401) ENSMSIG00000021554 Prxl2c (ENSMSIG00000021569) Ctsl (ENSMSIG00000021593) Cdk20 (ENSMSIG00000021605) #22 Fam240b (ENSMSIG00000021651) ENSMSIG00000021654 ENSMSIG00000021657 Cntnap3 (ENSMSIG00000021683) ENSMSIG00000021707 Spata31 (ENSMSIG00000021723) #27 ENSMSIG00000021729 Spata31d1c (ENSMSIG00000021735) ##27 ENSMSIG00000021748 Mfsd14b (ENSMSIG00000021759) ENSMSIG00000021775 Or14p1 (ENSMSIG00000021778) Or9s18 (ENSMSIG00000021783) Nlrp4f (ENSMSIG00000021800) Gm10775 (ENSMSIG00000021834) spretus MODERN SPECIES 4 Ctsm (MGP_SPRETEiJ_G0019508) MGP_SPRETEiJ_G0019509 Fbp2 (MGP_SPRETEiJ_G0019510) Fbp1 (MGP_SPRETEiJ_G0019511) Aopep (MGP_SPRETEiJ_G0019512) Fancc (MGP_SPRETEiJ_G0019513) Ptch1 (MGP_SPRETEiJ_G0019514) MGP_SPRETEiJ_G0019515 Hsd17b3 (MGP_SPRETEiJ_G0019516) Slc35d2 (MGP_SPRETEiJ_G0019517) Zfp367 (MGP_SPRETEiJ_G0019518) Habp4 (MGP_SPRETEiJ_G0019519) Cdc14b (MGP_SPRETEiJ_G0019520) Prxl2c (MGP_SPRETEiJ_G0019521) Ctsl (MGP_SPRETEiJ_G0019522) Cdk20 (MGP_SPRETEiJ_G0019523) #22 Fam240b (MGP_SPRETEiJ_G0019524) Cntnap3 (MGP_SPRETEiJ_G0019525) Spata31 (MGP_SPRETEiJ_G0019526) #27 Spata31d1c (MGP_SPRETEiJ_G0019527) ##27 Prss47 (MGP_SPRETEiJ_G0019528) Mfsd14b (MGP_SPRETEiJ_G0019529) Or14p1 (MGP_SPRETEiJ_G0019530) Or9s18 (MGP_SPRETEiJ_G0019531) Gm10775 (MGP_SPRETEiJ_G0019532) MGP_SPRETEiJ_G0019533 Uqcrb (MGP_SPRETEiJ_G0019534) Gm10767 (MGP_SPRETEiJ_G0019535) Mterf3 (MGP_SPRETEiJ_G0019536) MGP_SPRETEiJ_G0019537 Ptdss1 (MGP_SPRETEiJ_G0019538) Mouse MODERN SPECIES 4 Platr25 (ENSMUSG00000074863) Gm5141 (ENSMUSG00000091183) Fbp2 (ENSMUSG00000021456) Fbp1 (ENSMUSG00000069805) Aopep (ENSMUSG00000021458) Fancc (ENSMUSG00000021461) Ptch1 (ENSMUSG00000021466) Ercc6l2 (ENSMUSG00000021470) Hsd17b3 (ENSMUSG00000033122) Slc35d2 (ENSMUSG00000033114) Zfp367 (ENSMUSG00000044934) Habp4 (ENSMUSG00000021476) Cdc14b (ENSMUSG00000033102) Prxl2c (ENSMUSG00000021482) Ctsl (ENSMUSG00000021477) Cdk20 (ENSMUSG00000021483) #22 Fam240b (ENSMUSG00000096537) Cntnap3 (ENSMUSG00000033063) Spata31 (ENSMUSG00000056223) #27 Spata31d1c (ENSMUSG00000074849) ##27 Prss47 (ENSMUSG00000090658) Mfsd14b (ENSMUSG00000038212) Or14p1 (ENSMUSG00000108426) Or9s18 (ENSMUSG00000049806) Nlrp4f (ENSMUSG00000032999) Gm10775 (ENSMUSG00000074847) Zfp369 (ENSMUSG00000021514) Gm10139 (ENSMUSG00000063905) Zfp997 (ENSMUSG00000095909) Gm10772 (ENSMUSG00000091347) Zfp998 (ENSMUSG00000074832) Ryukyu mouse MODERN SPECIES 4 Ctsm (MGP_CAROLIEiJ_G0018628) MGP_CAROLIEiJ_G0018629 Fbp2 (MGP_CAROLIEiJ_G0018630) Fbp1 (MGP_CAROLIEiJ_G0018631) Aopep (MGP_CAROLIEiJ_G0018632) Fancc (MGP_CAROLIEiJ_G0018633) Ptch1 (MGP_CAROLIEiJ_G0018634) MGP_CAROLIEiJ_G0018635 Hsd17b3 (MGP_CAROLIEiJ_G0018636) Slc35d2 (MGP_CAROLIEiJ_G0018637) Zfp367 (MGP_CAROLIEiJ_G0018638) Habp4 (MGP_CAROLIEiJ_G0018639) Cdc14b (MGP_CAROLIEiJ_G0018640) Prxl2c (MGP_CAROLIEiJ_G0018641) Ctsl (MGP_CAROLIEiJ_G0018642) Cdk20 (MGP_CAROLIEiJ_G0018643) #22 Fam240b (MGP_CAROLIEiJ_G0018644) Cntnap3 (MGP_CAROLIEiJ_G0018645) Spata31 (MGP_CAROLIEiJ_G0018646) #27 Spata31d1c (MGP_CAROLIEiJ_G0018647) ##27 Prss47 (MGP_CAROLIEiJ_G0018648) Mfsd14b (MGP_CAROLIEiJ_G0018649) Or14p1 (MGP_CAROLIEiJ_G0018650) Or9s18 (MGP_CAROLIEiJ_G0018651) Nlrp4f (MGP_CAROLIEiJ_G0018652) Uqcrb (MGP_CAROLIEiJ_G0018653) Mterf3 (MGP_CAROLIEiJ_G0018654) Ptdss1 (MGP_CAROLIEiJ_G0018655) Zfp712 (MGP_CAROLIEiJ_G0018656) MGP_CAROLIEiJ_G0018657 MGP_CAROLIEiJ_G0018658 Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019692 MGP_PahariEiJ_G0019693 Fbp2 (MGP_PahariEiJ_G0019694) Fbp1 (MGP_PahariEiJ_G0019695) Aopep (MGP_PahariEiJ_G0019696) Fancc (MGP_PahariEiJ_G0019697) Ptch1 (MGP_PahariEiJ_G0019698) MGP_PahariEiJ_G0019699 Hsd17b3 (MGP_PahariEiJ_G0019700) Slc35d2 (MGP_PahariEiJ_G0019701) Zfp367 (MGP_PahariEiJ_G0019702) Habp4 (MGP_PahariEiJ_G0019703) Cdc14b (MGP_PahariEiJ_G0019704) Prxl2c (MGP_PahariEiJ_G0019705) MGP_PahariEiJ_G0019706 Cdk20 (MGP_PahariEiJ_G0019707) #22 Fam240b (MGP_PahariEiJ_G0019708) Cntnap3 (MGP_PahariEiJ_G0019709) Spata31 (MGP_PahariEiJ_G0019710) #27 Spata31d1c (MGP_PahariEiJ_G0019711) ##27 Prss47 (MGP_PahariEiJ_G0019712) Mfsd14b (MGP_PahariEiJ_G0019713) Or14p1 (MGP_PahariEiJ_G0019714) Or9s18 (MGP_PahariEiJ_G0019715) Nlrp4f (MGP_PahariEiJ_G0019716) MGP_PahariEiJ_G0019717 Uqcrb (MGP_PahariEiJ_G0019718) Mterf3 (MGP_PahariEiJ_G0019719) Ptdss1 (MGP_PahariEiJ_G0019720) Zfp712 (MGP_PahariEiJ_G0019721) MGP_PahariEiJ_G0019722 Rat MODERN SPECIES 8 Fbp2 (ENSRNOG00000017637) Fbp1 (ENSRNOG00000017597) ENSRNOG00000063737 Aopep (ENSRNOG00000017505) Fancc (ENSRNOG00000016889) Ptch1 (ENSRNOG00000019354) Ercc6l2 (ENSRNOG00000019175) Hsd17b3 (ENSRNOG00000019096) Slc35d2 (ENSRNOG00000027229) Zfp367 (ENSRNOG00000027234) Habp4 (ENSRNOG00000019027) Cdc14b (ENSRNOG00000018999) Prxl2c (ENSRNOG00000018886) Ctsl (ENSRNOG00000018566) AABR07026797.1 (ENSRNOG00000018554) Cdk20 (ENSRNOG00000017991) #22 Fam240b (ENSRNOG00000050209) AABR07026805.2 (ENSRNOG00000040101) Cntnap3 (ENSRNOG00000027309) Spata31a5 (ENSRNOG00000018202) #27 Spata31d1c (ENSRNOG00000040116) ##27 Prss47 (ENSRNOG00000031461) Mfsd14b (ENSRNOG00000018227) Or14p1 (ENSRNOG00000018489) Or9s18 (ENSRNOG00000067756) Upper Galilee mountains blind mole rat MODERN SPECIES 688 Cdk20 (ENSNGAG00000015145) #22 ENSNGAG00000013432 ENSNGAG00000003982 Cyp4f39 (ENSNGAG00000002067) Pglyrp2 (ENSNGAG00000001513) Rasal3 (ENSNGAG00000015073) Wiz (ENSNGAG00000012635) ENSNGAG00000012342 Akap8 (ENSNGAG00000010875) ENSNGAG00000006488 Ephx3 (ENSNGAG00000000440) ENSNGAG00000016261 Notch3 (ENSNGAG00000004387) Rodentia_A ANCESTRAL SPECIES 30 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT00390000011897 ENSGT00940000159941 Sciuridae ANCESTRAL SPECIES 63 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 Eurasian red squirrel MODERN SPECIES 4 NFIL3 (ENSSVLG00005016170) #9 ENSSVLG00005016113 #10 SYK (ENSSVLG00005015852) #11 DIRAS2 (ENSSVLG00005015750) #12 GADD45G (ENSSVLG00005015686) #13 SEMA4D (ENSSVLG00005015553) #14 ENSSVLG00005015496 ENSSVLG00005015333 #15 ENSSVLG00005015265 #16 ENSSVLG00005015240 SHC3 (ENSSVLG00005015118) #17 S1PR3 (ENSSVLG00005015065) #18 NXNL2 (ENSSVLG00005015010) #20 SPIN1 (ENSSVLG00005014978) #21 ENSSVLG00005014853 CDK20 (ENSSVLG00005014962) #22 ENSSVLG00005014675 ENSSVLG00005014596 ENSSVLG00005014576 ENSSVLG00005014503 ENSSVLG00005014467 ENSSVLG00005014413 ENSSVLG00005014378 ENSSVLG00005014367 ENSSVLG00005014271 ENSSVLG00005014069 ENSSVLG00005014000 ENSSVLG00005013919 ENSSVLG00005013777 ENSSVLG00005013732 BARX1 (ENSSVLG00005013696) Marmotini ANCESTRAL SPECIES 110 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 89 NUDT11 (ENSMMMG00000021913) ENSMMMG00000021916 #7 ENSMMMG00000021923 #7 ROR2 (ENSMMMG00000021925) #8 NFIL3 (ENSMMMG00000021947) #9 ENSMMMG00000021950 #10 SYK (ENSMMMG00000021952) #11 GADD45G (ENSMMMG00000021965) #13 SEMA4D (ENSMMMG00000021970) #14 ENSMMMG00000021973 SECISBP2 (ENSMMMG00000021975) #15 CKS2 (ENSMMMG00000021980) #16 SHC3 (ENSMMMG00000021983) #17 S1PR3 (ENSMMMG00000021989) #18 SPIN1 (ENSMMMG00000021994) #21 ENSMMMG00000022012 #22 ENSMMMG00000022016 ENSMMMG00000022029 ENSMMMG00000022032 CTSV (ENSMMMG00000022033) ENSMMMG00000022038 ZNF782 (ENSMMMG00000022039) ZNF510 (ENSMMMG00000022042) PRXL2C (ENSMMMG00000022044) ENSMMMG00000002227 ENSMMMG00000002250 SLC35D2 (ENSMMMG00000002267) HSD17B3 (ENSMMMG00000002462) ENSMMMG00000002531 PTCH1 (ENSMMMG00000002556) FANCC (ENSMMMG00000002674) Alpin marmot MODERN SPECIES 33 CST7 (ENSMMMG00000021618) APMAP (ENSMMMG00000021607) ACSS1 (ENSMMMG00000021594) VSX1 (ENSMMMG00000021586) ENTPD6 (ENSMMMG00000021571) PYGB (ENSMMMG00000021556) ABHD12 (ENSMMMG00000021545) GINS1 (ENSMMMG00000021538) NINL (ENSMMMG00000021519) ENSMMMG00000021516 NANP (ENSMMMG00000021513) CHRNA7 (ENSMMMG00000021504) ENSMMMG00000021501 #22 OTUD7A (ENSMMMG00000021494) ENSMMMG00000021489 ENSMMMG00000021473 MTMR10 (ENSMMMG00000021458) FAN1 (ENSMMMG00000021382) MPHOSPH10 (ENSMMMG00000021375) MCEE (ENSMMMG00000021367) APBA2 (ENSMMMG00000021344) ENTREP2 (ENSMMMG00000021334) TJP1 (ENSMMMG00000021295) ENSMMMG00000021280 TARS3 (ENSMMMG00000021271) TM2D3 (ENSMMMG00000021261) PCSK6 (ENSMMMG00000021221) SNRPA1 (ENSMMMG00000021206) Marmotini_b ANCESTRAL SPECIES 222 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 Arctic ground squirrel MODERN SPECIES 1259 CDK20 (ENSUPAG00010007172) #22 Squirrel MODERN SPECIES 453 ENSSTOG00000000349 #17 SPIN1 (ENSSTOG00000029107) #21 CDK20 (ENSSTOG00000004663) #22 ENSSTOG00000019961 Hystricomorpha ANCESTRAL SPECIES 62 ENSGT00940000163284 #29 ENSGT00940000156081 ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00550000074921 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a ENSGT00940000159597 #28 ENSGT00390000006976 #30 ENSGT00390000016408 #31 ENSGT00940000158892.b #32 ENSGT00940000157161.b #33 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000017554 FOCAD (ENSHGLG00000010449) PTPLAD2 (ENSHGLG00000015090) ENSHGLG00000009375 ENSHGLG00000040693 ENSHGLG00000020519 ENSHGLG00000020691 ENSHGLG00000006983 ENSHGLG00000018870 ENSHGLG00000006265 ENSHGLG00000019003 ENSHGLG00000005687 ENSHGLG00000003036 ENSHGLG00000007302 ENSHGLG00000044890 ENSHGLG00000006210 #22 ENSHGLG00000037708 ENSHGLG00000004959 ENSHGLG00000011793 ENSHGLG00000005602 ENSHGLG00000000210 ENSHGLG00000035491 ENSHGLG00000041847 ENSHGLG00000006616 ENSHGLG00000020314 ENSHGLG00000008650 ENSHGLG00000034314 CDKN2B (ENSHGLG00000038311) ENSHGLG00000040016 DMRTA1 (ENSHGLG00000051021) ELAVL2 (ENSHGLG00000005423) Hystricomorpha_a ANCESTRAL SPECIES 12 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00940000163284 #29 ENSGT00940000156081 ENSGT00940000153505.a.a.c.b ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000157345.a ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00550000074921 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a ENSGT00940000159597 #28 ENSGT00390000006976 #30 ENSGT00390000016408 #31 ENSGT00940000158892.b #32 ENSGT00940000157161.b #33 Guinea pig MODERN SPECIES 42 FANCC (ENSCPOG00000032150) PTCH1 (ENSCPOG00000002376) ENSCPOG00000004544 HSD17B3 (ENSCPOG00000000609) ENSCPOG00000005956 HABP4 (ENSCPOG00000002477) ZNF367 (ENSCPOG00000001515) SLC35D2 (ENSCPOG00000003734) CTSV (ENSCPOG00000009219) ZNF484 (ENSCPOG00000034778) #29 MFSD14B (ENSCPOG00000003933) ENSCPOG00000039483 ENSCPOG00000020022 FAM240B (ENSCPOG00000029983) ENSCPOG00000027499 CDK20 (ENSCPOG00000008588) #22 ENSCPOG00000026037 IARS1 (ENSCPOG00000000819) ENSCPOG00000027360 ENSCPOG00000031767 OGN (ENSCPOG00000031658) OMD (ENSCPOG00000000822) ASPN (ENSCPOG00000000823) ECM2 (ENSCPOG00000026773) CENPP (ENSCPOG00000000820) IPPK (ENSCPOG00000011247) BICD2 (ENSCPOG00000007672) FGD3 (ENSCPOG00000035143) #28 SUSD3 (ENSCPOG00000037889) #30 CARD19 (ENSCPOG00000008165) #31 NINJ1 (ENSCPOG00000033959) #32 Hystricomorpha_b ANCESTRAL SPECIES 99 ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000157345.a ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00550000074921 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a ENSGT00940000159597 #28 ENSGT00390000006976 #30 ENSGT00390000016408 #31 ENSGT00940000158892.b #32 ENSGT00940000157161.b #33 Degu MODERN SPECIES 141 ENSODEG00000018943 ENSODEG00000003598 FAM240B (ENSODEG00000003572) ENSODEG00000003554 ENSODEG00000004617 CDK20 (ENSODEG00000004600) #22 ENSODEG00000004567 ENSODEG00000004404 NOL8 (ENSODEG00000004312) C1QL4 (ENSODEG00000004295) ENSODEG00000004276 PRPH (ENSODEG00000004229) ENSODEG00000004198 LMBR1L (ENSODEG00000004152) DHH (ENSODEG00000004129) RHEBL1 (ENSODEG00000004107) ENSODEG00000004083 ENSODEG00000004064 ENSODEG00000004046 DDN (ENSODEG00000004034) WNT1 (ENSODEG00000004027) Lagomorpha ANCESTRAL SPECIES 183 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00900000143482 #23 Rabbit MODERN SPECIES ROR2 (ENSOCUG00000016548) #8 ENSOCUG00000038426 NFIL3 (ENSOCUG00000000145) #9 AUH (ENSOCUG00000007430) #10 SYK (ENSOCUG00000017539) #11 DIRAS2 (ENSOCUG00000000252) #12 GADD45G (ENSOCUG00000013296) #13 SEMA4D (ENSOCUG00000012955) #14 SECISBP2 (ENSOCUG00000012932) #15 ENSOCUG00000030530 CKS2 (ENSOCUG00000033803) #16 SHC3 (ENSOCUG00000015412) #17 S1PR3 (ENSOCUG00000015376) #18 ENSOCUG00000022990 #20 SPIN1 (ENSOCUG00000011880) #21 CDK20 (ENSOCUG00000007770) #22 ENSOCUG00000035141 #23 ENSOCUG00000025727 ENSOCUG00000001695 ENSOCUG00000023646 OPCML (ENSOCUG00000011172) NTM (ENSOCUG00000000213) ENSOCUG00000031738 SNX19 (ENSOCUG00000001730) ADAMTS15 (ENSOCUG00000000374) ADAMTS8 (ENSOCUG00000000370) ZBTB44 (ENSOCUG00000010058) ST14 (ENSOCUG00000009365) APLP2 (ENSOCUG00000010051) PRDM10 (ENSOCUG00000003736) NFRKB (ENSOCUG00000003729) Pika MODERN SPECIES 7410 CDK20 (ENSOPRG00000011409) #22 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000186231 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000159128 #22 Hedgehog MODERN SPECIES 9924 CDK20 (ENSEEUG00000014803) #22 Laurasiatheria_a ANCESTRAL SPECIES 24 ENSGT01030000235189 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a ENSGT00940000159597 #28 ENSGT00390000006976 #30 ENSGT00390000016408 #31 ENSGT00940000158892.b #32 ENSGT00940000157161.b #33 ENSGT00530000063168.a.a.a #36 ENSGT00940000158148 #37 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000186231 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000186231 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Cetacea ANCESTRAL SPECIES 9 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00390000004322.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00390000010888.c.b.b ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT00940000159941 Odontoceti ANCESTRAL SPECIES 8 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00390000004322.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b ENSGT00990000210271 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT01020000231252 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a Sperm whale MODERN SPECIES 20 NFIL3 (ENSPCTG00005010999) #9 AUH (ENSPCTG00005010791) #10 SYK (ENSPCTG00005010491) #11 DIRAS2 (ENSPCTG00005010448) #12 ENSPCTG00005010393 ENSPCTG00005010358 SEMA4D (ENSPCTG00005010286) #14 ENSPCTG00005010223 SECISBP2 (ENSPCTG00005010120) #15 CKS2 (ENSPCTG00005010079) #16 SHC3 (ENSPCTG00005009913) #17 S1PR3 (ENSPCTG00005009896) #18 NXNL2 (ENSPCTG00005009860) #20 SPIN1 (ENSPCTG00005009796) #21 ENSPCTG00005009720 CDK20 (ENSPCTG00005009562) #22 ENSPCTG00005009509 ENSPCTG00005009459 ZNF169 (ENSPCTG00005009394) PTPDC1 (ENSPCTG00005009259) BARX1 (ENSPCTG00005009148) ENSPCTG00005009129 PHF2 (ENSPCTG00005008980) #37 FAM120A (ENSPCTG00005008753) #36 ENSPCTG00005006732 #33 ENSPCTG00005006501 ENSPCTG00005006487 NINJ1 (ENSPCTG00005006464) #32 CARD19 (ENSPCTG00005006437) #31 SUSD3 (ENSPCTG00005006380) #30 FGD3 (ENSPCTG00005006265) #28 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00390000004322.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b.u.b ENSGT00990000210271 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT01020000231252 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484.o #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00390000004322.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b.u.b ENSGT00990000210271 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT01020000231252 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a Monodontidae ANCESTRAL SPECIES 5 ENSGT00550000074872 #7 ENSGT00940000153947.A.m #8 ENSGT00940000160540 #9 ENSGT00940000157484.o #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00390000004322.a.b ENSGT00940000159128 #22 ENSGT00410000025793.b.u.b ENSGT00990000210271 ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000163284 #29 ENSGT01020000231252 ENSGT00550000074921 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000010053 ENSGT00940000154471.a.b.a.a Beluga whale MODERN SPECIES 78 SPTLC1 (ENSDLEG00000018393) #7 ENSDLEG00000018428 #8 ENSDLEG00000018433 #8 NFIL3 (ENSDLEG00000018441) #9 ENSDLEG00000018453 #10 SYK (ENSDLEG00000015722) #11 DIRAS2 (ENSDLEG00000015748) #12 GADD45G (ENSDLEG00000015764) #13 SEMA4D (ENSDLEG00000015785) #14 SECISBP2 (ENSDLEG00000015828) #15 CKS2 (ENSDLEG00000015855) #16 SHC3 (ENSDLEG00000015868) #17 S1PR3 (ENSDLEG00000015904) #18 SPIN1 (ENSDLEG00000015918) #21 ENSDLEG00000015927 CDK20 (ENSDLEG00000015931) #22 ENSDLEG00000015944 ENSDLEG00000015961 ENSDLEG00000015963 MFSD14B (ENSDLEG00000015972) ENSDLEG00000016015 Narwhal MODERN SPECIES 312 SPTLC1 (ENSMMNG00015012052) #7 ROR2 (ENSMMNG00015012081) #8 NFIL3 (ENSMMNG00015012096) #9 ENSMMNG00015012125 #10 SYK (ENSMMNG00015012182) #11 DIRAS2 (ENSMMNG00015012204) #12 GADD45G (ENSMMNG00015012223) #13 SEMA4D (ENSMMNG00015012264) #14 SECISBP2 (ENSMMNG00015012340) #15 CKS2 (ENSMMNG00015012397) #16 SHC3 (ENSMMNG00015012437) #17 S1PR3 (ENSMMNG00015012472) #18 NXNL2 (ENSMMNG00015012487) #20 ENSMMNG00015012500 #21 ENSMMNG00015012515 CDK20 (ENSMMNG00015012535) #22 ENSMMNG00015012559 ZNF658 (ENSMMNG00015012566) MFSD14B (ENSMMNG00015012575) ZNF484 (ENSMMNG00015012606) #29 ENSMMNG00015012626 IARS1 (ENSMMNG00015012645) NOL8 (ENSMMNG00015012723) CENPP (ENSMMNG00015012771) OGN (ENSMMNG00015012787) OMD (ENSMMNG00015012799) ASPN (ENSMMNG00015012866) ECM2 (ENSMMNG00015012886) IPPK (ENSMMNG00015012906) BICD2 (ENSMMNG00015012915) ENSMMNG00015012937 Vaquita MODERN SPECIES 17 SPTLC1 (ENSPSNG00000001133) #7 ROR2 (ENSPSNG00000001108) #8 NFIL3 (ENSPSNG00000001083) #9 ENSPSNG00000001036 #10 SYK (ENSPSNG00000000946) #11 DIRAS2 (ENSPSNG00000000897) #12 GADD45G (ENSPSNG00000000875) #13 SEMA4D (ENSPSNG00000000841) #14 SECISBP2 (ENSPSNG00000000782) #15 CKS2 (ENSPSNG00000000756) #16 SHC3 (ENSPSNG00000000701) #17 S1PR3 (ENSPSNG00000000664) #18 NXNL2 (ENSPSNG00000000624) #20 ENSPSNG00000000606 #21 ENSPSNG00000000574 CDK20 (ENSPSNG00000000519) #22 ENSPSNG00000000454 ENSPSNG00000000418 ENSPSNG00000000401 ZNF658 (ENSPSNG00000000380) MFSD14B (ENSPSNG00000000319) ZNF484 (ENSPSNG00000000261) #29 ENSPSNG00000000235 IARS1 (ENSPSNG00000000163) NOL8 (ENSPSNG00000000105) OGN (ENSPSNG00000004431) OMD (ENSPSNG00000004410) ASPN (ENSPSNG00000004372) ECM2 (ENSPSNG00000004301) CENPP (ENSPSNG00000004254) IPPK (ENSPSNG00000004211) Dolphin MODERN SPECIES 1221 CDK20 (ENSTTRG00000008468) #22 Blue whale DUPLICATION Blue whale MODERN SPECIES 17 AUH (ENSBMSG00010005184) #10 NFIL3 (ENSBMSG00010005203) #9 ROR2 (ENSBMSG00010005213) #8 SPTLC1 (ENSBMSG00010005226) #7 ENSBMSG00010005235 ENSBMSG00010005259 ENSBMSG00010005294 ##27 ENSBMSG00010005301 ENSBMSG00010005309 ENSBMSG00010005421 ENSBMSG00010005769 SLC18A1 (ENSBMSG00010005801) LPL (ENSBMSG00010005877) ENSBMSG00010005885 ENSBMSG00010005912 ENSBMSG00010005930 #22 WNK2 (ENSBMSG00010005992) #33 FAM120A (ENSBMSG00010006146) #36 PHF2 (ENSBMSG00010006176) #37 BARX1 (ENSBMSG00010006203) PTPDC1 (ENSBMSG00010006220) ZNF169 (ENSBMSG00010006258) MFSD14B (ENSBMSG00010006281) ZNF484 (ENSBMSG00010006328) #29 ENSBMSG00010006336 IARS1 (ENSBMSG00010006346) NOL8 (ENSBMSG00010006380) CENPP (ENSBMSG00010006410) OGN (ENSBMSG00010006425) OMD (ENSBMSG00010006432) ASPN (ENSBMSG00010006444) Blue whale MODERN SPECIES 17 ROR2 (ENSBMSG00010005213) #8 NFIL3 (ENSBMSG00010005203) #9 AUH (ENSBMSG00010005184) #10 SYK (ENSBMSG00010005143) #11 DIRAS2 (ENSBMSG00010005130) #12 ENSBMSG00010005124 GADD45G (ENSBMSG00010005112) #13 SEMA4D (ENSBMSG00010005089) #14 SECISBP2 (ENSBMSG00010005076) #15 CKS2 (ENSBMSG00010005066) #16 SHC3 (ENSBMSG00010003082) #17 S1PR3 (ENSBMSG00010003071) #18 NXNL2 (ENSBMSG00010003054) #20 ENSBMSG00010003044 #21 ENSBMSG00010003021 CDK20 (ENSBMSG00010003011) #22 LZTS1 (ENSBMSG00010003000) GFRA2 (ENSBMSG00010002937) DOK2 (ENSBMSG00010002903) XPO7 (ENSBMSG00010002861) ENSBMSG00010002839 FGF17 (ENSBMSG00010002827) DMTN (ENSBMSG00010002797) FHIP2B (ENSBMSG00010002761) NUDT18 (ENSBMSG00010002749) HR (ENSBMSG00010002713) REEP4 (ENSBMSG00010002672) LGI3 (ENSBMSG00010002646) SFTPC (ENSBMSG00010002602) BMP1 (ENSBMSG00010002570) PHYHIP (ENSBMSG00010002539) Pecora ANCESTRAL SPECIES 29 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT01010000222336.a.a.b.a ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 Percora_a ANCESTRAL SPECIES 29 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT01010000222336.a.a.b.a ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 Siberian musk deer MODERN SPECIES 328 ROR2 (ENSMMSG00000013476) #8 ENSMMSG00000013531 NFIL3 (ENSMMSG00000013545) #9 AUH (ENSMMSG00000013559) #10 SYK (ENSMMSG00000013609) #11 ENSMMSG00000013651 DIRAS2 (ENSMMSG00000013671) #12 GADD45G (ENSMMSG00000013683) #13 SEMA4D (ENSMMSG00000013708) #14 SECISBP2 (ENSMMSG00000013784) #15 ENSMMSG00000013881 #16 SHC3 (ENSMMSG00000013899) #17 S1PR3 (ENSMMSG00000013957) #18 NXNL2 (ENSMMSG00000013994) #20 ENSMMSG00000014010 #21 ENSMMSG00000014052 #22 ENSMMSG00000014135 #23 ENSMMSG00000014143 ENSMMSG00000014167 MSANTD3 (ENSMMSG00000014180) TMEFF1 (ENSMMSG00000014195) CAVIN4 (ENSMMSG00000014219) Bovidae ANCESTRAL SPECIES 14 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT01010000222336.a.a.b.a ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 Bovinae ANCESTRAL SPECIES 14 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484.q.a #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00390000008610.a.b.a.a.a ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 ENSGT00730000111075.a American bison MODERN SPECIES 3127 ENSBBBG00000001136 GADD45G (ENSBBBG00000001141) #13 SEMA4D (ENSBBBG00000001159) #14 SECISBP2 (ENSBBBG00000003662) #15 CKS2 (ENSBBBG00000007495) #16 SHC3 (ENSBBBG00000014827) #17 S1PR3 (ENSBBBG00000003646) #18 NXNL2 (ENSBBBG00000014798) #20 ENSBBBG00000014793 #21 ENSBBBG00000007901 ENSBBBG00000003639 ENSBBBG00000003586 CDK20 (ENSBBBG00000014763) #22 ENSBBBG00000003573 ENSBBBG00000009056 #23 ENSBBBG00000003569 MSANTD3 (ENSBBBG00000007409) TMEFF1 (ENSBBBG00000014680) CAVIN4 (ENSBBBG00000014670) PLPPR1 (ENSBBBG00000014654) ENSBBBG00000014607 MRPL50 (ENSBBBG00000003370) ZNF189 (ENSBBBG00000003365) ALDOB (ENSBBBG00000003356) PGAP4 (ENSBBBG00000014452) RNF20 (ENSBBBG00000014442) GRIN3A (ENSBBBG00000014421) Bos ANCESTRAL SPECIES 10 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484.q.a #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00390000008610.a.b.a.a.a ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 ENSGT00730000111075.a Bos_b ANCESTRAL SPECIES 37 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484.q.a #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00960000190164 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 ENSGT01100000263474.a.b.b.e.a.a.a.a.u.b.a Cow MODERN SPECIES 27 ENSBTAG00000054391 AUH (ENSBTAG00000047649) #10 SYK (ENSBTAG00000004767) #11 DIRAS2 (ENSBTAG00000014523) #12 GADD45G (ENSBTAG00000003033) #13 SEMA4D (ENSBTAG00000001941) #14 SECISBP2 (ENSBTAG00000001939) #15 CKS2 (ENSBTAG00000001938) #16 SHC3 (ENSBTAG00000011375) #17 S1PR3 (ENSBTAG00000011374) #18 ENSBTAG00000052296 NXNL2 (ENSBTAG00000019958) #20 SPIN1 (ENSBTAG00000003044) #21 ENSBTAG00000051928 ENSBTAG00000054632 CDK20 (ENSBTAG00000015171) #22 ENSBTAG00000025756 ENSBTAG00000021235 MSANTD3 (ENSBTAG00000052146) TMEFF1 (ENSBTAG00000021991) CAVIN4 (ENSBTAG00000021992) PLPPR1 (ENSBTAG00000003137) ENSBTAG00000025760 MRPL50 (ENSBTAG00000008962) ZNF189 (ENSBTAG00000015348) ALDOB (ENSBTAG00000015358) PGAP4 (ENSBTAG00000020844) RNF20 (ENSBTAG00000009516) GRIN3A (ENSBTAG00000018445) ENSBTAG00000030953 CYLC2 (ENSBTAG00000015608) Hybrid Bos Indicus MODERN SPECIES 27 ENSBIXG00005015429 SYK (ENSBIXG00005015383) #11 GADD45G (ENSBIXG00005007017) #13 ENSBIXG00005015086 SEMA4D (ENSBIXG00005015061) #14 SECISBP2 (ENSBIXG00005002182) #15 CKS2 (ENSBIXG00005014877) #16 SHC3 (ENSBIXG00005007541) #17 S1PR3 (ENSBIXG00005014807) #18 ENSBIXG00005014767 ENSBIXG00005014754 #20 SPIN1 (ENSBIXG00005014731) #21 ENSBIXG00005014699 ENSBIXG00005002055 ENSBIXG00005014679 ENSBIXG00005014615 #22 ENSBIXG00005001979 #23 ENSBIXG00005014483 CAVIN4 (ENSBIXG00005014388) TMEFF1 (ENSBIXG00005014446) PLPPR1 (ENSBIXG00005014325) ENSBIXG00005014276 MRPL50 (ENSBIXG00005014246) ZNF189 (ENSBIXG00005006126) ENSBIXG00005014223 ENSBIXG00005014133 RNF20 (ENSBIXG00005001840) GRIN3A (ENSBIXG00005014071) ENSBIXG00005014002 ENSBIXG00005013982 SMC2 (ENSBIXG00005013952) Bos_a ANCESTRAL SPECIES 20 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484.q.a #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00390000008610.a.b.a.a.a ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00390000002866.b ENSGT00940000158571 ENSGT00730000111075.a ENSGT00550000074857 ENSGT00530000064170.f Wild yak MODERN SPECIES 1604 CDK20 (ENSBMUG00000002598) #22 ENSBMUG00000002489 ENSBMUG00000002462 #23 ENSBMUG00000002447 TMEFF1 (ENSBMUG00000002418) CAVIN4 (ENSBMUG00000002371) PLPPR1 (ENSBMUG00000002351) ENSBMUG00000002311 MRPL50 (ENSBMUG00000002295) ZNF189 (ENSBMUG00000002284) ALDOB (ENSBMUG00000002259) ENSBMUG00000002200 TMEM132C (ENSBMUG00000002173) SLC15A4 (ENSBMUG00000002145) Domestic yak MODERN SPECIES 26 SYK (ENSBGRG00000017500) #11 ENSBGRG00000017926 DIRAS2 (ENSBGRG00000017972) #12 ENSBGRG00000018096 GADD45G (ENSBGRG00000018117) #13 ENSBGRG00000018220 SEMA4D (ENSBGRG00000018250) #14 SECISBP2 (ENSBGRG00000018399) #15 CKS2 (ENSBGRG00000018663) #16 SHC3 (ENSBGRG00000018902) #17 S1PR3 (ENSBGRG00000019092) #18 ENSBGRG00000019106 NXNL2 (ENSBGRG00000019130) #20 ENSBGRG00000019166 #21 ENSBGRG00000019209 ENSBGRG00000019270 #22 ENSBGRG00000020356 #23 TMEFF1 (ENSBGRG00000000379) CAVIN4 (ENSBGRG00000000485) PLPPR1 (ENSBGRG00000000500) ENSBGRG00000000536 ENSBGRG00000000554 MRPL50 (ENSBGRG00000000573) ZNF189 (ENSBGRG00000000584) ENSBGRG00000000599 ENSBGRG00000000643 RNF20 (ENSBGRG00000000693) GRIN3A (ENSBGRG00000000837) ENSBGRG00000000901 ENSBGRG00000000912 SMC2 (ENSBGRG00000000950) Caprinae ANCESTRAL SPECIES 14 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00390000008610.a.b.a.a.a ENSGT00950000182925.D.a.a.b.a.l #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT01010000222336.a.a.b.a ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b ENSGT00940000158571 Goat MODERN SPECIES 27 DIRAS2 (ENSCHIG00000010043) #12 ENSCHIG00000015279 GADD45G (ENSCHIG00000016621) #13 SEMA4D (ENSCHIG00000000579) #14 ENSCHIG00000003164 SECISBP2 (ENSCHIG00000010657) #15 CKS2 (ENSCHIG00000022256) #16 SHC3 (ENSCHIG00000010693) #17 S1PR3 (ENSCHIG00000022209) #18 ENSCHIG00000013230 NXNL2 (ENSCHIG00000015108) #20 ENSCHIG00000024607 #21 ENSCHIG00000015952 ENSCHIG00000002451 ENSCHIG00000020095 CDK20 (ENSCHIG00000012924) #22 ENSCHIG00000024181 ENSCHIG00000003968 MSANTD3 (ENSCHIG00000023805) TMEFF1 (ENSCHIG00000017109) CAVIN4 (ENSCHIG00000009596) PLPPR1 (ENSCHIG00000010910) ENSCHIG00000024836 BAAT (ENSCHIG00000024449) MRPL50 (ENSCHIG00000015308) ZNF189 (ENSCHIG00000016152) ALDOB (ENSCHIG00000003090) PGAP4 (ENSCHIG00000008870) RNF20 (ENSCHIG00000013006) GRIN3A (ENSCHIG00000026387) ENSCHIG00000017820 Rambouillet Sheep MODERN SPECIES 11 AUH (ENSOARG00020000459) #10 SYK (ENSOARG00020000234) #11 DIRAS2 (ENSOARG00020004255) #12 ENSOARG00020004199 ENSOARG00020004185 GADD45G (ENSOARG00020004157) #13 SEMA4D (ENSOARG00020003886) #14 CKS2 (ENSOARG00020003844) #16 ENSOARG00020003826 SHC3 (ENSOARG00020003742) #17 S1PR3 (ENSOARG00020003683) #18 NXNL2 (ENSOARG00020003654) #20 ENSOARG00020003637 ENSOARG00020003604 #21 ENSOARG00020003563 #23 CDK20 (ENSOARG00020003277) #22 ENSOARG00020003147 MSANTD3-TMEFF1 (ENSOARG00020003065) CAVIN4 (ENSOARG00020003029) PLPPR1 (ENSOARG00020003000) MRPL50 (ENSOARG00020002978) ZNF189 (ENSOARG00020002955) ALDOB (ENSOARG00020002927) PGAP4 (ENSOARG00020002921) RNF20 (ENSOARG00020002897) GRIN3A (ENSOARG00020002876) ENSOARG00020002855 SMC2 (ENSOARG00020002804) ENSOARG00020002793 OR13F1 (ENSOARG00020002785) ENSOARG00020002779 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 27 ENSCHYG00000008107 #22 ENSCHYG00000008132 UQCRFS1 (ENSCHYG00000008146) VSTM2B (ENSCHYG00000008190) VAC14 (ENSCHYG00000008226) MTSS2 (ENSCHYG00000008377) ENSCHYG00000008508 SF3B3 (ENSCHYG00000008563) COG4 (ENSCHYG00000008715) FCSK (ENSCHYG00000009116) ENSCHYG00000009502 ST3GAL2 (ENSCHYG00000009526) DDX19B (ENSCHYG00000009670) ENSCHYG00000010544 ENSCHYG00000010579 AARS1 (ENSCHYG00000010641) Yarkand deer MODERN SPECIES 7 NFIL3 (ENSCHYG00000009827) #9 AUH (ENSCHYG00000009849) #10 SYK (ENSCHYG00000010139) #11 DIRAS2 (ENSCHYG00000010500) #12 ENSCHYG00000010541 GADD45G (ENSCHYG00000010591) #13 SEMA4D (ENSCHYG00000010678) #14 SECISBP2 (ENSCHYG00000011079) #15 CKS2 (ENSCHYG00000011196) #16 ENSCHYG00000011237 #17 S1PR3 (ENSCHYG00000011274) #18 ENSCHYG00000011299 #20 ENSCHYG00000011329 #21 ENSCHYG00000011383 ENSCHYG00000011400 ENSCHYG00000011490 #22 ENSCHYG00000012081 #23 ENSCHYG00000012101 TMEFF1 (ENSCHYG00000012232) CAVIN4 (ENSCHYG00000012360) PLPPR1 (ENSCHYG00000012393) ENSCHYG00000012444 MRPL50 (ENSCHYG00000012476) ZNF189 (ENSCHYG00000012510) ALDOB (ENSCHYG00000012534) PGAP4 (ENSCHYG00000012606) RNF20 (ENSCHYG00000012621) GRIN3A (ENSCHYG00000012746) ENSCHYG00000012808 SMC2 (ENSCHYG00000012928) ENSCHYG00000013206 Suina ANCESTRAL SPECIES 66 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a.k.a #21 ENSGT00940000159128 #22 Pig DUPLICATION Pig DUPLICATION Pig MODERN SPECIES 5 NFIL3 (ENSSSCG00000009592) #9 AUH (ENSSSCG00000009591) #10 ENSSSCG00000046718 SYK (ENSSSCG00000009589) #11 DIRAS2 (ENSSSCG00000031694) #12 ENSSSCG00000044138 ENSSSCG00000031962 GADD45G (ENSSSCG00000035249) #13 SEMA4D (ENSSSCG00000009584) #14 SECISBP2 (ENSSSCG00000028033) #15 CKS2 (ENSSSCG00000021161) #16 SHC3 (ENSSSCG00000039841) #17 S1PR3 (ENSSSCG00000009580) #18 NXNL2 (ENSSSCG00000035269) #20 SPIN1 (ENSSSCG00000035901) #21 ENSSSCG00000009578 #22 Pig MODERN SPECIES 217 ENSSSCG00000032337 #22 Pig MODERN SPECIES 271 ENSSSCG00000016385 #22 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 44 ENSCWAG00000000971 ENSCWAG00000000922 ENSCWAG00000000908 #22 VAMP7 (ENSCWAG00000000883) ENSCWAG00000000859 SPRY3 (ENSCWAG00000000847) ENSCWAG00000000835 TMLHE (ENSCWAG00000000814) ENSCWAG00000000796 ENSCWAG00000000788 CLIC2 (ENSCWAG00000000773) RAB39B (ENSCWAG00000000758) ENSCWAG00000000727 BRCC3 (ENSCWAG00000000584) MTCP1 (ENSCWAG00000000545) CMC4 (ENSCWAG00000000535) FUNDC2 (ENSCWAG00000000516) ENSCWAG00000000499 Chacoan peccary MODERN SPECIES 174 ROR2 (ENSCWAG00000001505) #8 NFIL3 (ENSCWAG00000001487) #9 AUH (ENSCWAG00000001450) #10 SYK (ENSCWAG00000001400) #11 DIRAS2 (ENSCWAG00000001361) #12 ENSCWAG00000001346 ENSCWAG00000001331 GADD45G (ENSCWAG00000001316) #13 SEMA4D (ENSCWAG00000001229) #14 SECISBP2 (ENSCWAG00000001166) #15 ENSCWAG00000001140 #16 SHC3 (ENSCWAG00000001098) #17 S1PR3 (ENSCWAG00000001083) #18 NXNL2 (ENSCWAG00000001066) #20 ENSCWAG00000001052 #21 ENSCWAG00000001014 #22 Chacoan peccary MODERN SPECIES 861 ZNF396 (ENSCWAG00000014868) INO80C (ENSCWAG00000014796) GALNT1 (ENSCWAG00000014742) C18orf21 (ENSCWAG00000014691) RPRD1A (ENSCWAG00000014615) SLC39A6 (ENSCWAG00000014554) ELP2 (ENSCWAG00000014334) MOCOS (ENSCWAG00000014163) FHOD3 (ENSCWAG00000014019) TPGS2 (ENSCWAG00000013857) KIAA1328 (ENSCWAG00000013725) CELF4 (ENSCWAG00000013061) ENSCWAG00000012964 PIK3C3 (ENSCWAG00000012510) SYT4 (ENSCWAG00000012421) ENSCWAG00000012307 #22 ENSCWAG00000012293 ENSCWAG00000012271 ENSCWAG00000012225 ENSCWAG00000012153 Laurasiatheria_b ANCESTRAL SPECIES 25 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000154537 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Carnivora ANCESTRAL SPECIES 25 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Felidae ANCESTRAL SPECIES 28 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT00390000011897 ENSGT00940000159941 Cat MODERN SPECIES 244 SPTLC1 (ENSFCAG00000004693) #7 ROR2 (ENSFCAG00000004691) #8 NFIL3 (ENSFCAG00000013483) #9 AUH (ENSFCAG00000041629) #10 ENSFCAG00000048138 SYK (ENSFCAG00000014214) #11 DIRAS2 (ENSFCAG00000010838) #12 ENSFCAG00000048178 GADD45G (ENSFCAG00000045577) #13 SEMA4D (ENSFCAG00000004215) #14 SECISBP2 (ENSFCAG00000004214) #15 CKS2 (ENSFCAG00000022286) #16 SHC3 (ENSFCAG00000004212) #17 S1PR3 (ENSFCAG00000004210) #18 SPIN1 (ENSFCAG00000032225) #21 CDK20 (ENSFCAG00000007194) #22 ZNF169 (ENSFCAG00000038394) PTPDC1 (ENSFCAG00000009022) BARX1 (ENSFCAG00000026846) PHF2 (ENSFCAG00000009018) #37 FAM120A (ENSFCAG00000009016) #36 WNK2 (ENSFCAG00000048609) #33 NINJ1 (ENSFCAG00000015142) #32 CARD19 (ENSFCAG00000015141) #31 SUSD3 (ENSFCAG00000021928) #30 FGD3 (ENSFCAG00000015134) #28 ENSFCAG00000027526 BICD2 (ENSFCAG00000000822) ECM2 (ENSFCAG00000012118) ASPN (ENSFCAG00000029465) OMD (ENSFCAG00000012114) Panthera ANCESTRAL SPECIES 34 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 Panthera_a ANCESTRAL SPECIES 35 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 lion MODERN SPECIES 13 ROR2 (ENSPLOG00000011343) #8 NFIL3 (ENSPLOG00000011410) #9 AUH (ENSPLOG00000011478) #10 SYK (ENSPLOG00000011610) #11 DIRAS2 (ENSPLOG00000011740) #12 ENSPLOG00000011751 GADD45G (ENSPLOG00000011783) #13 SEMA4D (ENSPLOG00000011862) #14 ENSPLOG00000011900 SECISBP2 (ENSPLOG00000011955) #15 CKS2 (ENSPLOG00000011990) #16 SHC3 (ENSPLOG00000012045) #17 S1PR3 (ENSPLOG00000012139) #18 NXNL2 (ENSPLOG00000012160) #20 SPIN1 (ENSPLOG00000012204) #21 CDK20 (ENSPLOG00000012257) #22 ENSPLOG00000012359 leopard MODERN SPECIES 42 ENSPPRG00000023237 SPTLC1 (ENSPPRG00000023598) #7 ROR2 (ENSPPRG00000023627) #8 NFIL3 (ENSPPRG00000019620) #9 AUH (ENSPPRG00000023647) #10 SYK (ENSPPRG00000023709) #11 DIRAS2 (ENSPPRG00000019585) #12 GADD45G (ENSPPRG00000023729) #13 SEMA4D (ENSPPRG00000023776) #14 SECISBP2 (ENSPPRG00000023911) #15 CKS2 (ENSPPRG00000023985) #16 SHC3 (ENSPPRG00000024006) #17 S1PR3 (ENSPPRG00000019534) #18 NXNL2 (ENSPPRG00000024021) #20 SPIN1 (ENSPPRG00000024042) #21 CDK20 (ENSPPRG00000024130) #22 ENSPPRG00000024175 Tiger MODERN SPECIES 270 SPTLC1 (ENSPTIG00000009183) #7 ROR2 (ENSPTIG00000009279) #8 NFIL3 (ENSPTIG00000007890) #9 AUH (ENSPTIG00000009358) #10 SYK (ENSPTIG00000009425) #11 DIRAS2 (ENSPTIG00000007897) #12 ENSPTIG00000007901 ENSPTIG00000009531 SEMA4D (ENSPTIG00000009693) #14 SECISBP2 (ENSPTIG00000009781) #15 CKS2 (ENSPTIG00000009918) #16 ENSPTIG00000009948 #17 S1PR3 (ENSPTIG00000007905) #18 SPIN1 (ENSPTIG00000010012) #21 CDK20 (ENSPTIG00000010026) #22 ENSPTIG00000010126 Caniformia ANCESTRAL SPECIES 29 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Caniformia_b ANCESTRAL SPECIES 32 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 ENSGT00940000157345.a ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a Mustelinae ANCESTRAL SPECIES 162 ENSGT00950000183043.a.b.b.a.a.a.b ##27 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00900000143482 #23 American mink MODERN SPECIES 291 SPTLC1 (ENSNVIG00000015119) #7 ROR2 (ENSNVIG00000015679) #8 NFIL3 (ENSNVIG00000015686) #9 AUH (ENSNVIG00000015695) #10 SYK (ENSNVIG00000015728) #11 DIRAS2 (ENSNVIG00000015838) #12 GADD45G (ENSNVIG00000015843) #13 ENSNVIG00000015865 SECISBP2 (ENSNVIG00000015876) #15 CKS2 (ENSNVIG00000015897) #16 SHC3 (ENSNVIG00000015916) #17 S1PR3 (ENSNVIG00000015934) #18 NXNL2 (ENSNVIG00000015946) #20 ENSNVIG00000015952 #21 CDK20 (ENSNVIG00000015979) #22 Ferret MODERN SPECIES 449 DIRAS2 (ENSMPUG00000019501) #12 ENSMPUG00000008449 ENSMPUG00000008454 ENSMPUG00000008461 GADD45G (ENSMPUG00000008466) #13 ENSMPUG00000008473 SEMA4D (ENSMPUG00000008476) #14 ENSMPUG00000008495 #15 ENSMPUG00000019503 SHC3 (ENSMPUG00000008506) #17 S1PR3 (ENSMPUG00000019505) #18 NXNL2 (ENSMPUG00000008578) #20 SPIN1 (ENSMPUG00000008585) #21 CDK20 (ENSMPUG00000008590) #22 ENSMPUG00000008597 ENSMPUG00000008600 Ursidae ANCESTRAL SPECIES 43 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00940000157345.a ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Ursus ANCESTRAL SPECIES 50 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C.o #16 ENSGT00950000182971.C.p.b #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00940000157345.a ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053.m ENSGT00940000159941 ENSGT00940000157444 American black bear MODERN SPECIES 3797 ENSUAMG00000009685 CDK20 (ENSUAMG00000009693) #22 ENSUAMG00000009711 ENSUAMG00000009715 ENSUAMG00000009718 Giant Panda MODERN SPECIES 8 ENSAMEG00000017351 ENSAMEG00000017352 #7 ROR2 (ENSAMEG00000027288) #8 NFIL3 (ENSAMEG00000019054) #9 AUH (ENSAMEG00000017380) #10 SYK (ENSAMEG00000017383) #11 DIRAS2 (ENSAMEG00000019089) #12 GADD45G (ENSAMEG00000029974) #13 SEMA4D (ENSAMEG00000003393) #14 SECISBP2 (ENSAMEG00000003349) #15 CKS2 (ENSAMEG00000011493) #16 ENSAMEG00000003321 #17 S1PR3 (ENSAMEG00000019897) #18 NXNL2 (ENSAMEG00000003317) #20 ENSAMEG00000003301 #21 ENSAMEG00000003241 #22 ENSAMEG00000026370 PTPDC1 (ENSAMEG00000002221) BARX1 (ENSAMEG00000002240) PHF2 (ENSAMEG00000006705) #37 FAM120A (ENSAMEG00000006683) #36 ENSAMEG00000026291 ENSAMEG00000006681 #33 ENSAMEG00000006647 #33 NINJ1 (ENSAMEG00000006677) #32 ENSAMEG00000006669 #31 ENSAMEG00000006665 #30 FGD3 (ENSAMEG00000006597) #28 BICD2 (ENSAMEG00000013567) IPPK (ENSAMEG00000013556) ECM2 (ENSAMEG00000013536) Canidae ANCESTRAL SPECIES 47 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00390000006922.m.b.a.d.fb.a ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00940000157345.a ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 Red fox MODERN SPECIES 192 ENSVVUG00000022347 #8 ROR2 (ENSVVUG00000022343) #8 ENSVVUG00000022335 NFIL3 (ENSVVUG00000022329) #9 AUH (ENSVVUG00000022323) #10 SYK (ENSVVUG00000022315) #11 DIRAS2 (ENSVVUG00000022314) #12 SEMA4D (ENSVVUG00000022296) #14 SECISBP2 (ENSVVUG00000022278) #15 ENSVVUG00000022274 #17 ENSVVUG00000022273 #17 ENSVVUG00000022272 S1PR3 (ENSVVUG00000022269) #18 SPIN1 (ENSVVUG00000022261) #21 ENSVVUG00000022259 CDK20 (ENSVVUG00000022251) #22 ENSVVUG00000022243 Canis_lupus ANCESTRAL SPECIES ENSGT00390000006922.m.b.a.d.fb.a ENSGT00390000002517.a.b.b.d ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00390000010063.c.b ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b.z ENSGT00940000157345.a ENSGT00410000025793.b.y ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a Dingo MODERN SPECIES 125 ENSCAFG00020006678 ENSCAFG00020006717 NFIL3 (ENSCAFG00020006720) #9 AUH (ENSCAFG00020006749) #10 SYK (ENSCAFG00020006838) #11 DIRAS2 (ENSCAFG00020007016) #12 ENSCAFG00020007083 GADD45G (ENSCAFG00020007172) #13 SEMA4D (ENSCAFG00020007191) #14 SECISBP2 (ENSCAFG00020007224) #15 CKS2 (ENSCAFG00020007235) #16 SHC3 (ENSCAFG00020007255) #17 S1PR3 (ENSCAFG00020007303) #18 NXNL2 (ENSCAFG00020007336) #20 SPIN1 (ENSCAFG00020007345) #21 CDK20 (ENSCAFG00020007411) #22 ENSCAFG00020007416 ENSCAFG00020007451 ENSCAFG00020007470 ENSCAFG00020007474 ZNF169 (ENSCAFG00020007507) PTPDC1 (ENSCAFG00020007593) BARX1 (ENSCAFG00020007642) PHF2 (ENSCAFG00020007732) #37 FAM120A (ENSCAFG00020008172) #36 ENSCAFG00020008481 WNK2 (ENSCAFG00020008546) #33 NINJ1 (ENSCAFG00020009074) #32 CARD19 (ENSCAFG00020009080) #31 ENSCAFG00020009113 #30 FGD3 (ENSCAFG00020009143) #28 Dog MODERN SPECIES ROR2 (ENSCAFG00845017326) #8 ENSCAFG00845017469 ENSCAFG00845017483 AUH (ENSCAFG00845017695) #10 SYK (ENSCAFG00845018106) #11 DIRAS2 (ENSCAFG00845018468) #12 ENSCAFG00845018518 GADD45G (ENSCAFG00845018559) #13 SEMA4D (ENSCAFG00845018763) #14 SECISBP2 (ENSCAFG00845019299) #15 CKS2 (ENSCAFG00845019881) #16 SHC3 (ENSCAFG00845019951) #17 S1PR3 (ENSCAFG00845020161) #18 NXNL2 (ENSCAFG00845020188) #20 SPIN1 (ENSCAFG00845020218) #21 CDK20 (ENSCAFG00845020367) #22 ENSCAFG00845021075 ENSCAFG00845021184 ENSCAFG00845021338 ZNF169 (ENSCAFG00845021431) ENSCAFG00845021496 PTPDC1 (ENSCAFG00845021599) BARX1 (ENSCAFG00845021794) PHF2 (ENSCAFG00845021923) #37 FAM120A (ENSCAFG00845022198) #36 WNK2 (ENSCAFG00845022409) #33 ENSCAFG00845023824 #32 CARD19 (ENSCAFG00845023862) #31 SUSD3 (ENSCAFG00845023954) #30 FGD3 (ENSCAFG00845024093) #28 ENSCAFG00845024190 Laurasiatheria_c ANCESTRAL SPECIES 28 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000154537 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT01030000235189 Equus ANCESTRAL SPECIES 37 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00910000147913 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00390000013795 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000154537 ENSGT00940000159128 #22 ENSGT00900000143482 #23 ENSGT00410000025793.b ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 #37 ENSGT00530000063168.a.a.a #36 ENSGT00940000157161.b #33 ENSGT00940000158892.b #32 ENSGT00390000016408 #31 ENSGT00390000006976 #30 ENSGT00940000159597 #28 ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT00940000159941 Horse MODERN SPECIES 15 NFIL3 (ENSECAG00000002437) #9 AUH (ENSECAG00000008989) #10 ENSECAG00000050965 SYK (ENSECAG00000009488) #11 DIRAS2 (ENSECAG00000002969) #12 ENSECAG00000029144 GADD45G (ENSECAG00000023399) #13 SEMA4D (ENSECAG00000010128) #14 SECISBP2 (ENSECAG00000015868) #15 ENSECAG00000033470 #16 SHC3 (ENSECAG00000023729) #17 S1PR3 (ENSECAG00000003011) #18 NXNL2 (ENSECAG00000024876) #20 SPIN1 (ENSECAG00000024933) #21 ENSECAG00000037731 CDK20 (ENSECAG00000024968) #22 ENSECAG00000009212 ENSECAG00000054774 ZNF169 (ENSECAG00000011164) PTPDC1 (ENSECAG00000012044) ENSECAG00000039693 PHF2 (ENSECAG00000017930) #37 FAM120A (ENSECAG00000011076) #36 WNK2 (ENSECAG00000019990) #33 NINJ1 (ENSECAG00000014267) #32 CARD19 (ENSECAG00000015151) #31 ENSECAG00000015522 #30 FGD3 (ENSECAG00000015742) #28 BICD2 (ENSECAG00000010780) IPPK (ENSECAG00000014942) CENPP (ENSECAG00000019351) Donkey MODERN SPECIES 15 ROR2 (ENSEASG00005013999) #8 NFIL3 (ENSEASG00005029760) #9 AUH (ENSEASG00005013993) #10 SYK (ENSEASG00005013986) #11 DIRAS2 (ENSEASG00005013983) #12 ENSEASG00005013982 GADD45G (ENSEASG00005036951) #13 SEMA4D (ENSEASG00005013965) #14 ENSEASG00005033736 SECISBP2 (ENSEASG00005013960) #15 CKS2 (ENSEASG00005036116) #16 SHC3 (ENSEASG00005013942) #17 S1PR3 (ENSEASG00005029613) #18 NXNL2 (ENSEASG00005013934) #20 SPIN1 (ENSEASG00005013932) #21 ENSEASG00005013927 #22 ENSEASG00005032400 #23 ENSEASG00005013916 ZNF169 (ENSEASG00005036504) PTPDC1 (ENSEASG00005013907) BARX1 (ENSEASG00005013904) PHF2 (ENSEASG00005013862) #37 FAM120A (ENSEASG00005013815) #36 WNK2 (ENSEASG00005013754) #33 NINJ1 (ENSEASG00005013730) #32 ENSEASG00005013719 #31 ENSEASG00005013713 #30 FGD3 (ENSEASG00005013708) #28 BICD2 (ENSEASG00005013702) IPPK (ENSEASG00005013693) ECM2 (ENSEASG00005013681) Chiroptera ANCESTRAL SPECIES 85 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Megabat MODERN SPECIES 1549 CDK20 (ENSPVAG00000008257) #22 Microchiroptera ANCESTRAL SPECIES 68 ENSGT00550000074872 #7 ENSGT00940000153947.A #8 ENSGT00940000160540 #9 ENSGT00940000157484 #10 ENSGT00940000159053 #11 ENSGT00940000158196 #12 ENSGT00950000182964.a.b.a #13 ENSGT00940000159594 #14 ENSGT00490000043356.b #15 ENSGT00950000182971.C #16 ENSGT00950000182870.a.a.a.b #17 ENSGT01050000244887.A.b.b #18 ENSGT00940000161260 #20 ENSGT00950000182925.D.a.a.b.a #21 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Microbat MODERN SPECIES 1611 CDK20 (ENSMLUG00000006632) #22 ENSMLUG00000029351 ENSMLUG00000023280 ENSMLUG00000027925 ENSMLUG00000023553 Greater horseshoe bat MODERN SPECIES 3 AUH (ENSRFEG00010012532) #10 ENSRFEG00010012637 SYK (ENSRFEG00010012729) #11 ENSRFEG00010012850 DIRAS2 (ENSRFEG00010012896) #12 GADD45G (ENSRFEG00010012920) #13 SEMA4D (ENSRFEG00010012999) #14 SECISBP2 (ENSRFEG00010013149) #15 CKS2 (ENSRFEG00010013235) #16 SHC3 (ENSRFEG00010013291) #17 ENSRFEG00010013604 S1PR3 (ENSRFEG00010013643) #18 ENSRFEG00010013675 NXNL2 (ENSRFEG00010013755) #20 SPIN1 (ENSRFEG00010013795) #21 ENSRFEG00010014026 #22 ENSRFEG00010014350 #23 ENSRFEG00010014380 ENSRFEG00010014497 ENSRFEG00010014777 ENSRFEG00010014852 ENSRFEG00010015125 PTPDC1 (ENSRFEG00010015242) BARX1 (ENSRFEG00010015567) ENSRFEG00010015683 PHF2 (ENSRFEG00010015717) #37 FAM120A (ENSRFEG00010015835) #36 ENSRFEG00010015896 ##27 ZNF658 (ENSRFEG00010016073) ENSRFEG00010016103 ##27 FAM240B (ENSRFEG00010016229) Atlantogenata ANCESTRAL SPECIES 202 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Afrotheria ANCESTRAL SPECIES ENSGT00940000159128 #22 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000159128 #22 Elephant MODERN SPECIES 42 GADD45G (ENSLAFG00000027458) #13 ENSLAFG00000013006 #14 SECISBP2 (ENSLAFG00000012998) #15 CKS2 (ENSLAFG00000012992) #16 SHC3 (ENSLAFG00000013523) #17 S1PR3 (ENSLAFG00000007294) #18 ENSLAFG00000021847 #20 SPIN1 (ENSLAFG00000027497) ##21 CDK20 (ENSLAFG00000005984) #22 Tenrec MODERN SPECIES 4876 CDK20 (ENSETEG00000012210) #22 Xenarthra ANCESTRAL SPECIES 1306 ENSGT00940000159128 #22 ENSGT00940000162955 ENSGT00410000025793.b ENSGT00940000157345.a Armadillo MODERN SPECIES 963 CDK20 (ENSDNOG00000045827) #22 ENSDNOG00000040606 ENSDNOG00000043284 ENSDNOG00000024757 ENSDNOG00000049280 Sloth MODERN SPECIES 4517 ENSCHOG00000010201 #22 Marsupialia ANCESTRAL SPECIES 29 ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000159855 ENSGT01030000234637.b.c ENSGT00940000153629.a.b ENSGT00940000158528 ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000162057 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C.f ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a ENSGT00940000159173 ENSGT00940000161233 ENSGT00730000110895.b.b ENSGT00940000160063 ENSGT00940000153634.a ENSGT00390000017639 ENSGT01030000234648.a.b.a.b ENSGT00390000002062 ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00390000017352.a Opossum MODERN SPECIES 627 ENSMODG00000041970 IQSEC2 (ENSMODG00000009707) GPR173 (ENSMODG00000046505) ENSMODG00000027767 ENSMODG00000009847 SYP (ENSMODG00000009899) CCDC22 (ENSMODG00000009860) CCDC120 (ENSMODG00000009910) TFE3 (ENSMODG00000009925) GRIPAP1 (ENSMODG00000010018) ENSMODG00000010033 PIM2 (ENSMODG00000010037) SLC35A2 (ENSMODG00000010048) ENSMODG00000010063 TIMM17B (ENSMODG00000010069) CDK20 (ENSMODG00000010092) #22 GATA1 (ENSMODG00000010099) ENSMODG00000044553 HDAC6 (ENSMODG00000010166) PORCN (ENSMODG00000010236) EBP (ENSMODG00000010248) TBC1D25 (ENSMODG00000010259) ENSMODG00000010292 WAS (ENSMODG00000010317) SUV39H1 (ENSMODG00000010324) WDR13 (ENSMODG00000010303) ENSMODG00000043220 GRM6 (ENSMODG00000010422) ABT1 (ENSMODG00000010429) ENSMODG00000010534 CXXC1 (ENSMODG00000010555) Marsupialia_b ANCESTRAL SPECIES 31 ENSGT00940000158963.c ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C.f ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a ENSGT00940000159173 ENSGT00940000161233 ENSGT00730000110895.b.b ENSGT00940000160063 ENSGT00940000153634.a ENSGT00390000017639 ENSGT01030000234648.a.b.a.b ENSGT00390000002062 ENSGT00950000183005.a.a ENSGT00730000111044.a ENSGT00730000111044.b Tasmanian devil MODERN SPECIES 21 ENSSHAG00000029754 FOXP3 (ENSSHAG00000002680) CCDC22 (ENSSHAG00000029776) CACNA1F (ENSSHAG00000001197) SYP (ENSSHAG00000025026) ENSSHAG00000004508 ENSSHAG00000027473 ENSSHAG00000031604 TFE3 (ENSSHAG00000003327) GRIPAP1 (ENSSHAG00000003080) ENSSHAG00000002843 PIM2 (ENSSHAG00000022404) OTUD5 (ENSSHAG00000024529) ENSSHAG00000021727 ENSSHAG00000001555 ENSSHAG00000021486 #22 ENSSHAG00000021720 ENSSHAG00000001040 ENSSHAG00000001709 ENSSHAG00000032369 ENSSHAG00000000940 ENSSHAG00000002882 ENSSHAG00000022637 ENSSHAG00000000138 ENSSHAG00000001207 ENSSHAG00000028465 ENSSHAG00000003137 ENSSHAG00000003493 ENSSHAG00000003661 ENSSHAG00000003967 ENSSHAG00000008525 Diprotodontia ANCESTRAL SPECIES 60 ENSGT00940000158963.c ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C.f ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a ENSGT00940000159173 ENSGT00940000161233 ENSGT00730000110895.b.b ENSGT00940000160063 ENSGT00940000153634.a ENSGT00390000017639 ENSGT01030000234648.a.b.a.b.g ENSGT00390000002062 ENSGT00950000183005.a.a ENSGT00730000111044.a ENSGT00390000006665.b Wallaby MODERN SPECIES 6166 CDK20 (ENSMEUG00000003902) #22 Diprotodontia_a ANCESTRAL SPECIES 58 ENSGT00940000158963.c ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C.f ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a ENSGT00940000159173 ENSGT00940000161233 ENSGT00730000110895.b.b ENSGT00940000160063 ENSGT00940000153634.a ENSGT00390000017639 ENSGT01030000234648.a.b.a.b.g ENSGT00390000002062 ENSGT00950000183005.a.a ENSGT00730000111044.a ENSGT00390000006665.b koala MODERN SPECIES 294 FOXP3 (ENSPCIG00000014474) CCDC22 (ENSPCIG00000014475) CACNA1F (ENSPCIG00000005925) SYP (ENSPCIG00000027881) PRICKLE3 (ENSPCIG00000027884) PLP2 (ENSPCIG00000027886) CCDC120 (ENSPCIG00000027887) TFE3 (ENSPCIG00000027889) GRIPAP1 (ENSPCIG00000027893) ENSPCIG00000027895 OTUD5 (ENSPCIG00000027896) PIM2 (ENSPCIG00000027897) ENSPCIG00000027902 ENSPCIG00000027905 TIMM17B (ENSPCIG00000027908) CDK20 (ENSPCIG00000027909) #22 GATA1 (ENSPCIG00000027911) HDAC6 (ENSPCIG00000027912) PORCN (ENSPCIG00000027915) EBP (ENSPCIG00000027919) TBC1D25 (ENSPCIG00000027924) SLC38A5 (ENSPCIG00000007378) ENSPCIG00000007542 SUV39H1 (ENSPCIG00000007547) WDR13 (ENSPCIG00000007549) ENSPCIG00000027932 GRM6 (ENSPCIG00000027935) ENSPCIG00000027936 ENSPCIG00000027937 CXXC1 (ENSPCIG00000027942) MON1B (ENSPCIG00000027954) Common wonbat MODERN SPECIES 1079 FOXP3 (ENSVURG00010021112) CCDC22 (ENSVURG00010021103) CACNA1F (ENSVURG00010011168) SYP (ENSVURG00010010730) PRICKLE3 (ENSVURG00010010711) ENSVURG00010010696 CCDC120 (ENSVURG00010010671) TFE3 (ENSVURG00010010649) GRIPAP1 (ENSVURG00010010555) ENSVURG00010010519 ENSVURG00010010507 PIM2 (ENSVURG00010010500) SLC35A2 (ENSVURG00010010497) ENSVURG00010010494 TIMM17B (ENSVURG00010010486) CDK20 (ENSVURG00010010475) #22 GATA1 (ENSVURG00010010465) HDAC6 (ENSVURG00010010455) PORCN (ENSVURG00010010369) EBP (ENSVURG00010010353) TBC1D25 (ENSVURG00010010343) SLC38A5 (ENSVURG00010010329) WAS (ENSVURG00010010322) ENSVURG00010010306 ABT1 (ENSVURG00010010299) Platypus MODERN SPECIES 17 CCDC22 (ENSOANG00000013583) CACNA1F (ENSOANG00000013580) SYP (ENSOANG00000047567) PRICKLE3 (ENSOANG00000013579) PLP2 (ENSOANG00000013578) ENSOANG00000013577 WDR45 (ENSOANG00000044470) TFE3 (ENSOANG00000013574) GRIPAP1 (ENSOANG00000051019) ENSOANG00000013573 OTUD5 (ENSOANG00000043640) ENSOANG00000038972 SLC35A2 (ENSOANG00000048927) PQBP1 (ENSOANG00000031396) TIMM17B (ENSOANG00000014281) CDK20 (ENSOANG00000010766) #22 GATA1 (ENSOANG00000010765) HDAC6 (ENSOANG00000002256) ENSOANG00000047880 PORCN (ENSOANG00000005775) EBP (ENSOANG00000012972) TBC1D25 (ENSOANG00000038580) ENSOANG00000014584 SLC38A5 (ENSOANG00000036935) WAS (ENSOANG00000015230) SUV39H1 (ENSOANG00000015959) WDR13 (ENSOANG00000006932) ENSOANG00000038903 GRM6 (ENSOANG00000014586) ABT1 (ENSOANG00000014590) ENSOANG00000051319 Sauria ANCESTRAL SPECIES 39 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00390000011272 ENSGT00940000161383 ENSGT00940000166196 ENSGT00390000013740 ENSGT00550000074803 ENSGT00390000016224.i ENSGT00950000182824.a.b.b ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000163880 ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00950000182835.c.c ENSGT00940000164454 ENSGT00940000162980 ENSGT00390000003348 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ##36 ENSGT00940000157847 ENSGT00940000156319 ENSGT00900000142661.a Lepidosauria ANCESTRAL SPECIES 38 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980 ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00900000142661.a Episquamata ANCESTRAL SPECIES 23 ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980 ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00950000183062.a.b ENSGT00390000008992 Laterata ANCESTRAL SPECIES 7 ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000162980 ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 Common wall lizard MODERN SPECIES 8 FTSJ1 (ENSPMRG00000018723) GPKOW (ENSPMRG00000018732) WDR45 (ENSPMRG00000018757) PRAF2 (ENSPMRG00000018857) ENSPMRG00000018863 CCDC120 (ENSPMRG00000018879) TFE3 (ENSPMRG00000018894) GRIPAP1 (ENSPMRG00000018908) ENSPMRG00000018926 SLC35A2 (ENSPMRG00000018937) OTUD5 (ENSPMRG00000018946) PIM2 (ENSPMRG00000018956) PQBP1 (ENSPMRG00000018963) TIMM17B (ENSPMRG00000018977) ENSPMRG00000018984 CDK20 (ENSPMRG00000018996) #22 GATA1 (ENSPMRG00000019007) ENSPMRG00000019014 HDAC6 (ENSPMRG00000019050) ENSPMRG00000019180 ENSPMRG00000019185 ENSPMRG00000019191 ENSPMRG00000019200 PRICKLE3 (ENSPMRG00000019210) ALAS2 (ENSPMRG00000019223) APEX2 (ENSPMRG00000019287) PFKFB1 (ENSPMRG00000019509) ITIH6 (ENSPMRG00000020797) PHF8 (ENSPMRG00000021005) FAM120C (ENSPMRG00000021045) ##36 WNK3 (ENSPMRG00000021103) Argentine black and white tegu MODERN SPECIES 12 ENSSMRG00000019244 FTSJ1 (ENSSMRG00000019243) GPKOW (ENSSMRG00000019242) WDR45 (ENSSMRG00000019241) PRAF2 (ENSSMRG00000019240) CCDC120 (ENSSMRG00000019239) TFE3 (ENSSMRG00000019237) GRIPAP1 (ENSSMRG00000019236) ENSSMRG00000019235 OTUD5 (ENSSMRG00000019233) PIM2 (ENSSMRG00000019232) SLC35A2 (ENSSMRG00000019231) PQBP1 (ENSSMRG00000019230) TIMM17B (ENSSMRG00000019229) ENSSMRG00000019228 CDK20 (ENSSMRG00000019227) #22 ENSSMRG00000019226 HDAC6 (ENSSMRG00000019223) ENSSMRG00000019221 ENSSMRG00000019220 ENSSMRG00000019219 ENSSMRG00000019211 PFKFB1 (ENSSMRG00000019210) APEX2 (ENSSMRG00000019209) ALAS2 (ENSSMRG00000019208) PRICKLE3 (ENSSMRG00000019206) ENSSMRG00000019205 ENSSMRG00000019204 ITIH6 (ENSSMRG00000019135) PHF8 (ENSSMRG00000019134) FAM120C (ENSSMRG00000019133) ##36 Toxicofera ANCESTRAL SPECIES 6 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980 ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00940000160145.b ENSGT00390000012692 Elapidae ANCESTRAL SPECIES 21 ENSGT00530000063715.a.t ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980.a ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00940000160145.b ENSGT00390000012692 Elapidae_a ANCESTRAL SPECIES 23 ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a.t ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980.a ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00940000160145.b ENSGT00390000012692 Acanthophiinae ANCESTRAL SPECIES 23 ENSGT00530000063715.a.s ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a.t ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00940000164755.C ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000163627 ENSGT00940000162980.a ENSGT00940000157847 ENSGT00530000063168.a.a.b ##36 ENSGT00940000160145.b ENSGT00390000012692 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 81 ENSNSUG00000019833 FTSJ1 (ENSNSUG00000019832) GPKOW (ENSNSUG00000019831) WDR45 (ENSNSUG00000019830) PRAF2 (ENSNSUG00000019829) CCDC120 (ENSNSUG00000019828) TFE3 (ENSNSUG00000019827) GRIPAP1 (ENSNSUG00000019826) ENSNSUG00000019825 OTUD5 (ENSNSUG00000019824) PIM2 (ENSNSUG00000019823) SLC35A2 (ENSNSUG00000019797) PQBP1 (ENSNSUG00000019794) TIMM17B (ENSNSUG00000019793) ENSNSUG00000019792 ENSNSUG00000019790 #22 ENSNSUG00000019789 #22 GATA1 (ENSNSUG00000019787) HDAC6 (ENSNSUG00000019782) ENSNSUG00000019776 ENSNSUG00000019772 ENSNSUG00000019770 ENSNSUG00000019769 PRICKLE3 (ENSNSUG00000019767) ALAS2 (ENSNSUG00000019765) APEX2 (ENSNSUG00000019753) PFKFB1 (ENSNSUG00000019752) ENSNSUG00000019751 ITIH6 (ENSNSUG00000019750) PHF8 (ENSNSUG00000019749) FAM120C (ENSNSUG00000019748) ##36 Mainland tiger snake MODERN SPECIES 81 FTSJ1 (ENSNSUG00000019832) GPKOW (ENSNSUG00000019831) WDR45 (ENSNSUG00000019830) PRAF2 (ENSNSUG00000019829) CCDC120 (ENSNSUG00000019828) TFE3 (ENSNSUG00000019827) GRIPAP1 (ENSNSUG00000019826) ENSNSUG00000019825 OTUD5 (ENSNSUG00000019824) PIM2 (ENSNSUG00000019823) SLC35A2 (ENSNSUG00000019797) PQBP1 (ENSNSUG00000019794) TIMM17B (ENSNSUG00000019793) ENSNSUG00000019792 ENSNSUG00000019790 #22 ENSNSUG00000019789 #22 GATA1 (ENSNSUG00000019787) HDAC6 (ENSNSUG00000019782) ENSNSUG00000019776 ENSNSUG00000019772 ENSNSUG00000019770 ENSNSUG00000019769 PRICKLE3 (ENSNSUG00000019767) ALAS2 (ENSNSUG00000019765) APEX2 (ENSNSUG00000019753) PFKFB1 (ENSNSUG00000019752) ENSNSUG00000019751 ITIH6 (ENSNSUG00000019750) PHF8 (ENSNSUG00000019749) FAM120C (ENSNSUG00000019748) ##36 WNK3 (ENSNSUG00000019747) Eastern brown snake MODERN SPECIES 52 ENSPTXG00000008258 FTSJ1 (ENSPTXG00000008257) GPKOW (ENSPTXG00000008255) WDR45 (ENSPTXG00000008253) PRAF2 (ENSPTXG00000008251) CCDC120 (ENSPTXG00000008213) TFE3 (ENSPTXG00000008211) GRIPAP1 (ENSPTXG00000008207) ENSPTXG00000008205 OTUD5 (ENSPTXG00000008201) PIM2 (ENSPTXG00000008198) SLC35A2 (ENSPTXG00000008196) PQBP1 (ENSPTXG00000008194) TIMM17B (ENSPTXG00000008191) ENSPTXG00000008189 CDK20 (ENSPTXG00000008188) #22 GATA1 (ENSPTXG00000008186) HDAC6 (ENSPTXG00000007959) ENSPTXG00000007920 ENSPTXG00000007914 PRICKLE3 (ENSPTXG00000007910) ALAS2 (ENSPTXG00000007906) APEX2 (ENSPTXG00000007903) PFKFB1 (ENSPTXG00000007895) ENSPTXG00000007890 ITIH6 (ENSPTXG00000007849) PHF8 (ENSPTXG00000007848) WNK3 (ENSPTXG00000007846) TSR2 (ENSPTXG00000007843) FGD1 (ENSPTXG00000006759) GNL3L (ENSPTXG00000006749) Blue-lipped sea krait MODERN SPECIES 406 CDK20 (ENSLLTG00000017450) #22 Indian cobra MODERN SPECIES 1 ENSNNAG00000010677 FTSJ1 (ENSNNAG00000010700) GPKOW (ENSNNAG00000010730) WDR45 (ENSNNAG00000010759) PRAF2 (ENSNNAG00000010800) CCDC120 (ENSNNAG00000010874) TFE3 (ENSNNAG00000010930) GRIPAP1 (ENSNNAG00000010983) ENSNNAG00000011249 OTUD5 (ENSNNAG00000011281) PIM2 (ENSNNAG00000011316) SLC35A2 (ENSNNAG00000011331) PQBP1 (ENSNNAG00000011352) TIMM17B (ENSNNAG00000011378) ENSNNAG00000011393 CDK20 (ENSNNAG00000011421) #22 GATA1 (ENSNNAG00000011453) HDAC6 (ENSNNAG00000011493) ENSNNAG00000011607 ENSNNAG00000011654 PRICKLE3 (ENSNNAG00000011671) ENSNNAG00000011726 APEX2 (ENSNNAG00000011774) PFKFB1 (ENSNNAG00000011906) NSMCE3 (ENSNNAG00000013747) ENSNNAG00000013761 ENSNNAG00000013810 PHF8 (ENSNNAG00000013830) FAM120C (ENSNNAG00000013861) ##36 WNK3 (ENSNNAG00000013960) TSR2 (ENSNNAG00000014165) Lizard MODERN SPECIES 1 ENSACAG00000035608 SUPT20H (ENSACAG00000017639) ENSACAG00000045496 EXOSC8 (ENSACAG00000040511) ALG5 (ENSACAG00000017663) ENSACAG00000017673 ENSACAG00000028701 ENSACAG00000017686 VANGL1 (ENSACAG00000003153) CASQ2 (ENSACAG00000003187) ENSACAG00000003304 SLC22A15 (ENSACAG00000003327) MAB21L3 (ENSACAG00000003399) ENSACAG00000037716 ENSACAG00000007813 ENSACAG00000007823 #22 ENSACAG00000007871 ENSACAG00000008098 ENSACAG00000026130 ENSACAG00000008192 IDH3G (ENSACAG00000008220) SRPK3 (ENSACAG00000008280) PLXNB3 (ENSACAG00000008378) ENSACAG00000029519 ABCD1 (ENSACAG00000008539) BCAP31 (ENSACAG00000008629) ENSACAG00000045378 ENSACAG00000008691 PNCK (ENSACAG00000008973) ENSACAG00000044476 DUSP9 (ENSACAG00000009178) tuatara MODERN SPECIES 1338 ENSSPUG00000005449 GRIPAP1 (ENSSPUG00000005484) ENSSPUG00000005543 CCDC120 (ENSSPUG00000005552) TIMM17B (ENSSPUG00000005579) CDK20 (ENSSPUG00000005620) #22 GATA1 (ENSSPUG00000005680) ENSSPUG00000005686 ENSSPUG00000005699 ENSSPUG00000005706 PLP2 (ENSSPUG00000005718) Archelosauria ANCESTRAL SPECIES 46 ENSGT00940000162821 ENSGT00890000139436.A.b ENSGT00390000013859 ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000159855 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00390000015154 ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000164454 ENSGT00940000162980 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ##36 Archosauria ANCESTRAL SPECIES 103 ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00390000015154 ENSGT00940000158528 Aves ANCESTRAL SPECIES 101 ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00390000015154 ENSGT00940000158528 Neognathae ANCESTRAL SPECIES 78 ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00390000015154 ENSGT00940000158528 Neognathae_b ANCESTRAL SPECIES 59 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657.l ENSGT00390000015154 ENSGT00940000158528 Passeriformes ANCESTRAL SPECIES 63 ENSGT00390000015332 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657.l ENSGT00390000015154 ENSGT00940000158528 ENSGT00730000111146 Passeriformes_d ANCESTRAL SPECIES 55 ENSGT00390000015332 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657.k ENSGT00940000155657.l ENSGT00390000015154 ENSGT00940000158528 ENSGT00730000111146 Passeriformes_g ANCESTRAL SPECIES 69 ENSGT00390000015332 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657.k ENSGT00940000155657.l ENSGT00390000015154 ENSGT00940000158528 ENSGT00730000111146 Passeroidea ANCESTRAL SPECIES 73 ENSGT00390000015332 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657.k ENSGT00940000155657.l ENSGT00390000015154 ENSGT00940000158528 ENSGT00730000111146 Zebra finch MODERN SPECIES 38 ENSTGUG00000028372 ENSTGUG00000026874 ENSTGUG00000029095 ENSTGUG00000028272 ENSTGUG00000023922 ENSTGUG00000026572 ENSTGUG00000029513 ENSTGUG00000019505 ENSTGUG00000029591 ENSTGUG00000024536 ENSTGUG00000029170 ENSTGUG00000023778 ENSTGUG00000022156 ENSTGUG00000023191 ENSTGUG00000024744 ENSTGUG00000028554 #22 ENSTGUG00000019119 ENSTGUG00000028864 ENSTGUG00000025548 ENSTGUG00000019270 WDR45 (ENSTGUG00000023573) ENSTGUG00000019637 PLP2 (ENSTGUG00000026260) FTSJ1 (ENSTGUG00000028610) ENSTGUG00000019361 ENSTGUG00000025544 ENSTGUG00000020586 ENSTGUG00000027861 ENSTGUG00000025565 ENSTGUG00000027543 ENSTGUG00000029563 Flycatcher MODERN SPECIES 557 ENSFALG00000006777 ENSFALG00000028147 ENSFALG00000006772 ENSFALG00000024267 ENSFALG00000006768 ENSFALG00000027435 #22 ENSFALG00000014784 ENSFALG00000026030 ENSFALG00000023939 ENSFALG00000007858 ENSFALG00000012848 ENSFALG00000027317 Great tit MODERN SPECIES 292 ENSPMJG00000003268 ENSPMJG00000003244 G6PD (ENSPMJG00000003236) IKBKG (ENSPMJG00000003235) SEPHS2 (ENSPMJG00000003234) PORCN (ENSPMJG00000003210) ENSPMJG00000003201 #22 HDAC6 (ENSPMJG00000002847) WDR45 (ENSPMJG00000002835) GPKOW (ENSPMJG00000002833) ENSPMJG00000002829 FTSJ1 (ENSPMJG00000002820) Neognathae_c ANCESTRAL SPECIES 66 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000000950.c.a ENSGT00950000182827.B ENSGT01030000234564.a.a.b.a ENSGT00940000159128 #22 ENSGT00940000161156 Kakapo MODERN SPECIES 27 ENSSHBG00005008463 WDR45 (ENSSHBG00005008450) ENSSHBG00005008422 ENSSHBG00005008400 ENSSHBG00005008388 ENSSHBG00005008249 IKBKG (ENSSHBG00005008187) ENSSHBG00005008159 SEPHS2 (ENSSHBG00005008143) ENSSHBG00005008129 SLC35A2 (ENSSHBG00005008109) PORCN (ENSSHBG00005008085) ENSSHBG00005008057 #22 GATA1 (ENSSHBG00005008065) ENSSHBG00005008000 ENSSHBG00005007974 UBL4A (ENSSHBG00005007963) ENSSHBG00005007944 ATP6AP1 (ENSSHBG00005007878) SYP (ENSSHBG00005007854) MECP2 (ENSSHBG00005007709) CCDC120 (ENSSHBG00005007693) ENSSHBG00005007668 OTUD5 (ENSSHBG00005007642) SRPK3 (ENSSHBG00005007575) IDH3G (ENSSHBG00005007512) SSR4 (ENSSHBG00005007493) L1CAM (ENSSHBG00005007471) Cryptodira ANCESTRAL SPECIES 96 ENSGT00940000162821 ENSGT00890000139436.A.b ENSGT00390000013859 ENSGT00390000003809 ENSGT00940000159855 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 Chinese turtle MODERN SPECIES 1236 TIMM17B (ENSPSIG00000015213) CDK20 (ENSPSIG00000015316) #22 ENSPSIG00000015539 Testudinoidea ANCESTRAL SPECIES 40 ENSGT00940000162821 ENSGT00890000139436.A.b ENSGT00390000013859 ENSGT00390000003809 ENSGT00940000159855 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00950000182835.c.c ENSGT00940000162980 ENSGT00390000003348 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b.hb ENSGT00530000063168.a.a.b ##36 ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000162770.p ENSGT00530000063540.a Emydidae ANCESTRAL SPECIES 59 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00950000182835.c.c ENSGT00940000162980 ENSGT00940000155877 ENSGT00940000160145.b.hb ENSGT00530000063168.a.a.b ##36 ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000162770.p ENSGT00530000063540.a ENSGT00940000159912 ENSGT00940000153629.a.b ENSGT00940000158528 painted turtle MODERN SPECIES 1022 GRIPAP1 (ENSCPBG00000017481) ENSCPBG00000017477 OTUD5 (ENSCPBG00000017475) PIM2 (ENSCPBG00000017474) SLC35A2 (ENSCPBG00000017464) PQBP1 (ENSCPBG00000017461) TIMM17B (ENSCPBG00000017459) CDK20 (ENSCPBG00000017458) #22 GATA1 (ENSCPBG00000017455) HDAC6 (ENSCPBG00000017452) WDR45 (ENSCPBG00000017434) PFKFB1 (ENSCPBG00000017423) ITIH6 (ENSCPBG00000017418) GNL3L (ENSCPBG00000017415) WNK3 (ENSCPBG00000017411) FAM120C (ENSCPBG00000017405) ##36 ENSCPBG00000017404 PHF8 (ENSCPBG00000017403) HUWE1 (ENSCPBG00000016914) ENSCPBG00000016638 APEX2 (ENSCPBG00000016631) ALAS2 (ENSCPBG00000016628) ENSCPBG00000016621 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 3156 ENSTMTG00000014100 #22 ENSTMTG00000014091 Three-toed box turtle MODERN SPECIES 3155 ENSTMTG00000014073 #22 Testudinidae ANCESTRAL SPECIES 46 ENSGT00940000162821 ENSGT00890000139436.A.b ENSGT00390000013859 ENSGT00390000003809 ENSGT00940000159855 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000159128 #22 ENSGT00940000161156 ENSGT00940000159563 ENSGT00940000155657 ENSGT00950000182835.c.c ENSGT00940000162980 ENSGT00390000003348 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b.hb ENSGT00530000063168.a.a.b ##36 ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000162770.p ENSGT00530000063540.a Goode s thornscrub tortoise MODERN SPECIES 201 ENSGEVG00005017856 GPR173 (ENSGEVG00005017796) ENSGEVG00005017775 CCDC22 (ENSGEVG00005017725) ENSGEVG00005017598 ENSGEVG00005017543 GRIPAP1 (ENSGEVG00005017492) ENSGEVG00005017449 OTUD5 (ENSGEVG00005017433) PIM2 (ENSGEVG00005017389) SLC35A2 (ENSGEVG00005017378) PQBP1 (ENSGEVG00005017360) TIMM17B (ENSGEVG00005017346) CDK20 (ENSGEVG00005017330) #22 Abingdon island giant tortoise MODERN SPECIES 643 ENSCABG00000015462 ENSCABG00000014703 GRIPAP1 (ENSCABG00000014673) ENSCABG00000014671 PIM2 (ENSCABG00000014669) SLC35A2 (ENSCABG00000014529) PQBP1 (ENSCABG00000014524) TIMM17B (ENSCABG00000014523) CDK20 (ENSCABG00000014521) #22 GATA1 (ENSCABG00000014518) HDAC6 (ENSCABG00000014483) ENSCABG00000014472 PFKFB1 (ENSCABG00000014470) ITIH6 (ENSCABG00000014464) FGD1 (ENSCABG00000014438) TSR2 (ENSCABG00000014424) WNK3 (ENSCABG00000014379) ENSCABG00000014370 ##36 Anura ANCESTRAL SPECIES 380 ENSGT00950000183102.C ENSGT00390000017780.e ENSGT00940000163880 ENSGT00940000159128 #22 ENSGT00940000161156 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000014195 SLC35A2 (ENSLLEG00000014108) ENSLLEG00000014085 OTUD5 (ENSLLEG00000014017) ENSLLEG00000013910 ENSLLEG00000012337 COMT (ENSLLEG00000011999) ABT1 (ENSLLEG00000011917) ENSLLEG00000011864 GRM6 (ENSLLEG00000011740) ENSLLEG00000011625 NDUFB11 (ENSLLEG00000011577) PQBP1 (ENSLLEG00000011392) TIMM17B (ENSLLEG00000010838) ENSLLEG00000010766 CDK20 (ENSLLEG00000010690) #22 ENSLLEG00000010635 ENSLLEG00000010530 ENSLLEG00000010488 ANAPC2 (ENSLLEG00000010272) ENSLLEG00000010236 ENSLLEG00000010207 ENSLLEG00000010183 ENSLLEG00000010171 ENSLLEG00000010110 ZNF618 (ENSLLEG00000009959) ENSLLEG00000009931 ARAF (ENSLLEG00000009556) ENSLLEG00000009466 ENSLLEG00000009435 ENSLLEG00000009393 Coelacanth MODERN SPECIES 922 ENSLACG00000006662 GPR173 (ENSLACG00000007798) ENSLACG00000009254 ENSLACG00000009383 FTSJ1 (ENSLACG00000009913) ENSLACG00000010305 opn1sw2 (ENSLACG00000010843) MECP2 (ENSLACG00000011281) ENSLACG00000011882 IRAK1 (ENSLACG00000013100) TMEM187 (ENSLACG00000013533) HCFC1 (ENSLACG00000013598) ENSLACG00000014206 CDK20 (ENSLACG00000014418) #22 Actinopterygii ANCESTRAL SPECIES 136 ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00940000155877 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 #22 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 Reedfish MODERN SPECIES 2 ENSECRG00000020026 abcd1 (ENSECRG00000020092) ccdc120b (ENSECRG00000020130) tfe3a (ENSECRG00000020165) ENSECRG00000020187 cxxc1a (ENSECRG00000020205) ENSECRG00000007589 FGD1 (ENSECRG00000007611) gnl3l (ENSECRG00000007644) mecp2 (ENSECRG00000007685) IRAK1 (ENSECRG00000007760) ENSECRG00000007782 TMEM187 (ENSECRG00000007796) HCFC1 (ENSECRG00000007822) si:dkey-13a21.4 (ENSECRG00000007855) cdk20 (ENSECRG00000007865) #22 gata1a (ENSECRG00000007886) ENSECRG00000007908 ENSECRG00000007966 tsr2 (ENSECRG00000008057) CDK16 (ENSECRG00000008102) comtb (ENSECRG00000008178) abt1 (ENSECRG00000008206) ENSECRG00000008237 ENSECRG00000008328 ENSECRG00000008668 zgc:86609 (ENSECRG00000008697) uxt (ENSECRG00000008724) ENSECRG00000008741 ENSECRG00000008752 otud5a (ENSECRG00000008757) Neopterygii ANCESTRAL SPECIES 131 ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00940000155877 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 #22 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 Spotted gar MODERN SPECIES 647 abcd1 (ENSLOCG00000014676) ENSLOCG00000014682 cxxc1a (ENSLOCG00000014684) zgc:113363 (ENSLOCG00000014689) tfe3a (ENSLOCG00000014691) FGD1 (ENSLOCG00000014698) gnl3l (ENSLOCG00000014702) ENSLOCG00000014710 opn1lw1 (ENSLOCG00000014714) opn1sw2 (ENSLOCG00000014721) mecp2 (ENSLOCG00000014725) IRAK1 (ENSLOCG00000014730) TMEM187 (ENSLOCG00000017979) HCFC1 (ENSLOCG00000014733) si:dkey-13a21.4 (ENSLOCG00000014749) cdk20 (ENSLOCG00000014752) #22 gata1a (ENSLOCG00000014759) ENSLOCG00000014762 ENSLOCG00000014763 pcsk1nl (ENSLOCG00000014765) PLP2 (ENSLOCG00000014766) sypb (ENSLOCG00000014767) ENSLOCG00000014770 ENSLOCG00000014772 timm17b (ENSLOCG00000014774) pqbp1 (ENSLOCG00000014775) gpkow (ENSLOCG00000014776) ENSLOCG00000014780 ENSLOCG00000014784 WNK3 (ENSLOCG00000014785) FAM120C (ENSLOCG00000014788) ##36 Osteoglossocephalai ANCESTRAL SPECIES 116 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000002062 ENSGT00940000155317.a.a ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383.d.b ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000234637.b.c.g ENSGT00940000159855 ENSGT00940000166169 ENSGT00390000008631.b ENSGT00390000017780.e ENSGT00950000183102.C ENSGT00390000015154 ENSGT00940000164755.D ENSGT00940000159667.b ENSGT00940000164196.d Osteoglossiformes ANCESTRAL SPECIES 147 ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00730000111044 ENSGT00940000155480.d.m ENSGT00940000158685 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383.d.b ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 Asian bonytongue MODERN SPECIES tsr2 (ENSSFOG00015002207) SRPK3 (ENSSFOG00015002090) PLXNB3 (ENSSFOG00015002059) abcd1 (ENSSFOG00015001977) ENSSFOG00015030516 ENSSFOG00015026264 ENSSFOG00015001950 cxxc1a (ENSSFOG00015001940) zgc:113363 (ENSSFOG00015032088) tfe3a (ENSSFOG00015001934) FGD1 (ENSSFOG00015001880) ENSSFOG00015001848 mecp2 (ENSSFOG00015029955) IRAK1 (ENSSFOG00015001632) HCFC1 (ENSSFOG00015001349) cdk20 (ENSSFOG00015001339) #22 ENSSFOG00015001334 HDAC6 (ENSSFOG00015001196) ENSSFOG00015001171 PRICKLE3 (ENSSFOG00015001147) plp2a (ENSSFOG00015001138) SYP (ENSSFOG00015001132) cacna1fb (ENSSFOG00015000557) timm17b (ENSSFOG00015000513) ENSSFOG00015000499 IQSEC2 (ENSSFOG00015000482) kdm5c (ENSSFOG00015000299) PDZD4 (ENSSFOG00015000289) ENSSFOG00015000272 porcnl (ENSSFOG00015000133) ENSSFOG00015031785 P. kingsleyae MODERN SPECIES 301 CDK16 (ENSPKIG00000023637) tsr2 (ENSPKIG00000023676) SRPK3 (ENSPKIG00000023691) PLXNB3 (ENSPKIG00000023729) abcd1 (ENSPKIG00000023779) ENSPKIG00000023796 ENSPKIG00000023805 cxxc1a (ENSPKIG00000023833) ENSPKIG00000023877 tfe3a (ENSPKIG00000023885) FGD1 (ENSPKIG00000023905) ENSPKIG00000023954 mecp2 (ENSPKIG00000023979) ENSPKIG00000023994 ENSPKIG00000024006 cdk20 (ENSPKIG00000024030) #22 ENSPKIG00000024047 HDAC6 (ENSPKIG00000024072) ENSPKIG00000024113 pcsk1nl (ENSPKIG00000024117) Clupeocephala ANCESTRAL SPECIES 149 ENSGT01050000244850.A.a.o.a ENSGT00940000156776.c ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00390000005780.a ENSGT00940000160485 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000002062 ENSGT00940000161383.d.b ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b Otomorpha ANCESTRAL SPECIES 83 ENSGT00940000155317.a.a ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00940000159855 ENSGT00940000164755.A ENSGT00940000159667.a ENSGT00950000183062.a.b.b.b ENSGT01030000234564.a.a.b.a.e ENSGT00940000166825 ENSGT00940000160063.g.a ENSGT00890000139436.A.b.a ENSGT00940000165955.a ENSGT00940000165056.a ENSGT00730000110895.b.b.c Otophysi ANCESTRAL SPECIES 127 ENSGT00940000163427.c ENSGT00940000158963.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00390000005780.a ENSGT00940000160485 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000002062 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000235233 ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT00390000003114.e.a.a ENSGT00940000153634.a Characiphysae ANCESTRAL SPECIES 41 ENSGT00940000155317.a.a ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000235233 ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b Channel catfish MODERN SPECIES 24 tsr2 (ENSIPUG00000012170) srpk3 (ENSIPUG00000012200) PLXNB3 (ENSIPUG00000012302) ABCD1 (ENSIPUG00000012423) CCDC120 (ENSIPUG00000012472) mbd1a (ENSIPUG00000012547) CXXC1 (ENSIPUG00000012610) ntpcr (ENSIPUG00000012672) zgc:113363 (ENSIPUG00000012710) tfe3a (ENSIPUG00000012922) FGD1 (ENSIPUG00000012986) ENSIPUG00000013003 mecp2 (ENSIPUG00000013019) irak1 (ENSIPUG00000013038) hcfc1 (ENSIPUG00000013092) cdk20 (ENSIPUG00000013183) #22 ENSIPUG00000013221 Hdac6 (ENSIPUG00000013277) ENSIPUG00000013393 pcsk1nl (ENSIPUG00000013403) ssuh2rs1 (ENSIPUG00000013410) ENSIPUG00000013430 grip2a (ENSIPUG00000013453) slc6a6a (ENSIPUG00000013496) abtb1 (ENSIPUG00000013593) ENSIPUG00000013621 ENSIPUG00000013643 rexo1 (ENSIPUG00000013683) zgc:101100 (ENSIPUG00000013719) Csnk1g2 (ENSIPUG00000013749) mfsd12 (ENSIPUG00000013821) Characiphysae_b ANCESTRAL SPECIES 134 ENSGT00940000155317.a.a ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000235233 ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b Characoidei ANCESTRAL SPECIES 150 ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000158685 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000235233 ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 Red-bellied piranha MODERN SPECIES 358 CDK16 (ENSPNAG00000024144) tsr2 (ENSPNAG00000024167) SRPK3 (ENSPNAG00000004866) PLXNB3 (ENSPNAG00000024448) abcd1 (ENSPNAG00000024508) ENSPNAG00000003831 mbd1a (ENSPNAG00000024566) cxxc1a (ENSPNAG00000006542) zgc:113363 (ENSPNAG00000005751) tfe3a (ENSPNAG00000024609) FGD1 (ENSPNAG00000005886) ENSPNAG00000024681 mecp2 (ENSPNAG00000024721) ENSPNAG00000024736 hcfc1b (ENSPNAG00000024755) cdk20 (ENSPNAG00000005669) #22 ENSPNAG00000024820 ENSPNAG00000006252 ENSPNAG00000024874 Mexicana tetra MODERN SPECIES 21 prkcz (ENSAMXG00000014051) ENSAMXG00000044054 ENSAMXG00000014027 si:ch211-150o23.2 (ENSAMXG00000032654) soat1 (ENSAMXG00000039298) SLC44A5 (ENSAMXG00000013985) plin3 (ENSAMXG00000013969) zgc:77486 (ENSAMXG00000013959) ENSAMXG00000036188 ENSAMXG00000009341 FGD1 (ENSAMXG00000016993) ENSAMXG00000030723 mecp2 (ENSAMXG00000039189) ENSAMXG00000039681 hcfc1b (ENSAMXG00000006488) cdk20 (ENSAMXG00000017068) #22 ENSAMXG00000017091 HDAC6 (ENSAMXG00000017118) ENSAMXG00000017157 pcsk1nl (ENSAMXG00000017161) ENSAMXG00000043920 ssuh2rs1 (ENSAMXG00000017171) grip2a (ENSAMXG00000036235) slc6a6a (ENSAMXG00000038150) ABTB1 (ENSAMXG00000040273) USP11 (ENSAMXG00000017309) zgc:86609 (ENSAMXG00000040575) uxt (ENSAMXG00000039548) ENSAMXG00000017384 ENSAMXG00000025140 otud5a (ENSAMXG00000038113) Electric eel MODERN SPECIES 111 ENSEEEG00000003718 ENSEEEG00000003712 abcd1 (ENSEEEG00000003708) ENSEEEG00000003704 cxxc1a (ENSEEEG00000003597) zgc:113363 (ENSEEEG00000003590) tfe3a (ENSEEEG00000003588) FGD1 (ENSEEEG00000003585) ENSEEEG00000003583 mecp2 (ENSEEEG00000003570) ENSEEEG00000003563 hcfc1b (ENSEEEG00000003562) cdk20 (ENSEEEG00000003560) #22 ENSEEEG00000003556 ENSEEEG00000003118 ENSEEEG00000003112 ssuh2rs1 (ENSEEEG00000003111) grip2a (ENSEEEG00000003094) slc6a6a (ENSEEEG00000001044) ABTB1 (ENSEEEG00000000901) ENSEEEG00000000872 ENSEEEG00000000864 mad2l2 (ENSEEEG00000000859) ENSEEEG00000000855 lrrc47 (ENSEEEG00000000853) CEP104 (ENSEEEG00000000848) b3gnt7l (ENSEEEG00000000842) ENSEEEG00000000839 Cyprinoidei ANCESTRAL SPECIES 32 ENSGT00940000163427.c ENSGT00940000158963.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00390000005780.a ENSGT00940000160485 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000002062 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT01030000235233 ENSGT00940000163873.c.a.o ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT00390000003114.e.a.a ENSGT00940000158414 ENSGT00980000198631 ENSGT00940000153634.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 136 ENSGT00940000159438.hb.b.b ENSGT00530000063687.b.b.b.s ENSGT00940000160502.i ENSGT00940000167532.a.a ENSGT00940000159128.a #22 ENSGT00940000166313.b.b ENSGT00940000159563.b ENSGT00990000203541.b.b ENSGT00950000182864.a.b.b.a.a.a.a.b ENSGT00990000203541.b.a ENSGT00600000085663 ENSGT01030000235233.a.a.a ENSGT00940000163873.c.a.o.a.a.b ENSGT00940000155615.i.b.f ENSGT00940000154583.f.a ENSGT00390000017131.a ENSGT00940000161090.B.c.b.b.b.b ENSGT01100000263573.b.b ENSGT00940000158414.h.b ENSGT00940000153634.a.k Cyprininae_a ANCESTRAL SPECIES 111 ENSGT00940000156963.a.b.a ENSGT00390000012692.p ENSGT00940000157877.b.g.a ENSGT01020000230394.e.a.a.b.a.b.c ENSGT00950000182955.a.b.a.j ENSGT00940000154102.b.a.b.f ENSGT00940000169444 ENSGT00730000111044.t ENSGT00940000158685.t.a ENSGT00940000157503.i.a.c ENSGT00940000159438.hb.a ENSGT00940000159438.hb.b.b ENSGT00530000063687.b.b.b.s ENSGT00940000160502.i ENSGT00940000167532.a.b ENSGT00940000159128.a #22 ENSGT00940000166313.b.b ENSGT00940000159563.b ENSGT00990000203541.b.b Golden-line barbel MODERN SPECIES 63 abt1 (ENSSGRG00000035053) comta (ENSSGRG00000035052) CDK16 (ENSSGRG00000035043) tsr2 (ENSSGRG00000035040) SRPK3 (ENSSGRG00000034455) PLXNB3 (ENSSGRG00000033604) abcd1 (ENSSGRG00000033492) ENSSGRG00000033490 cxxc1a (ENSSGRG00000033487) zgc:113363 (ENSSGRG00000033484) tfe3a (ENSSGRG00000033483) FGD1 (ENSSGRG00000033479) mecp2 (ENSSGRG00000033460) ENSSGRG00000033459 hcfc1b (ENSSGRG00000033403) cdk20 (ENSSGRG00000033396) #22 ENSSGRG00000033395 ENSSGRG00000033331 ENSSGRG00000033330 ENSSGRG00000033328 ENSSGRG00000033327 ssuh2rs1 (ENSSGRG00000033326) grip2a (ENSSGRG00000033196) slc6a6a (ENSSGRG00000033068) ABTB1 (ENSSGRG00000033061) gpd1a (ENSSGRG00000033057) asic1a (ENSSGRG00000033039) wdr13 (ENSSGRG00000032820) asb6 (ENSSGRG00000032817) ENSSGRG00000032815 dock5 (ENSSGRG00000032764) Common carp reference MODERN SPECIES 17 grm6a (ENSCCRG00000044676) abt1 (ENSCCRG00000025767) comta (ENSCCRG00000025764) ENSCCRG00000067741 SRPK3 (ENSCCRG00000025752) ENSCCRG00000030238 abcd1 (ENSCCRG00000035216) ENSCCRG00000035218 mbd1a (ENSCCRG00000065415) cxxc1a (ENSCCRG00000034737) zgc:113363 (ENSCCRG00000034733) tfe3a (ENSCCRG00000034728) ENSCCRG00000002107 mecp2 (ENSCCRG00000076063) ENSCCRG00000002126 cdk20 (ENSCCRG00000010099) #22 ENSCCRG00000035394 ENSCCRG00000000990 ENSCCRG00000000986 ENSCCRG00000047276 pym1 (ENSCCRG00000004095) ENSCCRG00000004092 ENSCCRG00000060878 trim36 (ENSCCRG00000004081) pggt1b (ENSCCRG00000035455) ENSCCRG00000074020 fem1c (ENSCCRG00000010209) ENSCCRG00000062246 COMMD10 (ENSCCRG00000033470) ENSCCRG00000045985 DMXL1 (ENSCCRG00000014874) Goldfish DUPLICATION Goldfish MODERN SPECIES 2915 mecp2 (ENSCARG00000062762) ENSCARG00000062766 hcfc1b (ENSCARG00000062849) cdk20 (ENSCARG00000063795) #22 ENSCARG00000063879 HDAC6 (ENSCARG00000063910) ENSCARG00000064224 ENSCARG00000064252 ssuh2rs1 (ENSCARG00000064278) ENSCARG00000064345 grip2a (ENSCARG00000064349) slc6a6a (ENSCARG00000064389) ABTB1 (ENSCARG00000064569) ENSCARG00000064595 ENSCARG00000064623 asic1a (ENSCARG00000064626) wdr13 (ENSCARG00000064635) asb6 (ENSCARG00000064690) neflb (ENSCARG00000064702) Goldfish MODERN SPECIES 3194 mecp2 (ENSCARG00000057153) ENSCARG00000057159 hcfc1b (ENSCARG00000057360) cdk20 (ENSCARG00000057773) #22 ENSCARG00000057829 HDAC6 (ENSCARG00000057856) ENSCARG00000058395 ENSCARG00000058415 ssuh2rs1 (ENSCARG00000058452) grip2a (ENSCARG00000058653) slc6a6a (ENSCARG00000058846) ABTB1 (ENSCARG00000059056) ENSCARG00000059076 ENSCARG00000059104 asic1a (ENSCARG00000059119) Cyprininae ANCESTRAL SPECIES 134 ENSGT00940000156963.a.b.b ENSGT00390000012692.o ENSGT00940000157877.b.g.b ENSGT01020000230394.e.a.a.b.a.b.d ENSGT00950000182955.a.b.a.i ENSGT00940000154102.b.a.b.e ENSGT00940000169444 ENSGT00730000111044.s ENSGT00940000158685.t.b ENSGT00940000157503.i.a.d ENSGT00940000159438.hb.b.a ENSGT00390000003348 ENSGT00530000063687.b.b.b.t ENSGT00940000160502.j ENSGT00940000167532.b ENSGT00940000159128.b #22 ENSGT00940000166313.b.a ENSGT00940000159563.a ENSGT01030000235233.a.a.b ENSGT01030000235233.b ENSGT00940000163873.c.a.o.a.b ENSGT00940000155615.i.b.e ENSGT00940000154583.f.b ENSGT00390000017131.b ENSGT00940000161090.B.c.b.b.b.a ENSGT00390000003114.e.a.a ENSGT00940000158414.h.a ENSGT00980000198631 ENSGT00940000153634.a.l ENSGT00390000006784.f ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.a.a.b.a Goldfish MODERN SPECIES 48 tsr2 (ENSCARG00000011484) SRPK3 (ENSCARG00000011511) ENSCARG00000011771 abcd1 (ENSCARG00000012822) ENSCARG00000013152 mbd1a (ENSCARG00000013159) cxxc1a (ENSCARG00000013188) zgc:113363 (ENSCARG00000013546) tfe3a (ENSCARG00000013560) FGD1 (ENSCARG00000013577) ENSCARG00000013801 mecp2 (ENSCARG00000013811) ENSCARG00000013822 hcfc1b (ENSCARG00000013922) ENSCARG00000014540 cdk20 (ENSCARG00000014545) #22 ENSCARG00000014548 HDAC6 (ENSCARG00000014612) ENSCARG00000016745 ENSCARG00000016762 ENSCARG00000016805 ssuh2rs1 (ENSCARG00000016820) grip2a (ENSCARG00000016845) slc6a6a (ENSCARG00000016876) ABTB1 (ENSCARG00000016926) ENSCARG00000017151 gpd1a (ENSCARG00000017158) asic1a (ENSCARG00000017188) ENSCARG00000017235 wdr13 (ENSCARG00000017242) ENSCARG00000017306 Cyprininae_a ANCESTRAL SPECIES 109 ENSGT01020000230394.e.a.a.b.a.b.d ENSGT00950000182955.a.b.a.i ENSGT00940000154102.b.a.b.e ENSGT00730000111044.s ENSGT00940000158685.t.b ENSGT00940000157503.i.a.d ENSGT00940000159438.hb.b.a ENSGT00390000003348 ENSGT00530000063687.b.b.b.t ENSGT00940000160502.j ENSGT00940000167532.b ENSGT00940000159128.b #22 ENSGT00940000166313.b.a ENSGT00940000159563.a ENSGT00990000203541.b.a ENSGT00600000085663 ENSGT01030000235233.a.a.a ENSGT00940000163873.c.a.o.a.a.b ENSGT01100000263473.a.b.h.b ENSGT01030000235233.a.a.b ENSGT01030000235233.b ENSGT00940000163873.c.a.p ENSGT00940000163873.c.a.o.a.b ENSGT00940000155615.i.b.e ENSGT00940000154583.f.b ENSGT00390000017131.b ENSGT00940000161090.B.c.b.b.b.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 441 ENSSGRG00000020509 abcd1 (ENSSGRG00000020483) ENSSGRG00000020482 zgc:113363 (ENSSGRG00000020479) ENSSGRG00000020478 FGD1 (ENSSGRG00000020400) ENSSGRG00000020398 mecp2 (ENSSGRG00000020397) ENSSGRG00000020396 hcfc1b (ENSSGRG00000019974) cdk20 (ENSSGRG00000019947) #22 cdk20 (ENSSGRG00000019946) #22 ENSSGRG00000019938 HDAC6 (ENSSGRG00000019867) ENSSGRG00000019863 ENSSGRG00000019860 ENSSGRG00000019859 ENSSGRG00000019858 ssuh2rs1 (ENSSGRG00000019857) grip2a (ENSSGRG00000019185) slc6a6a (ENSSGRG00000018659) ABTB1 (ENSSGRG00000018579) ENSSGRG00000018565 gpd1a (ENSSGRG00000018002) asic1a (ENSSGRG00000017998) wdr13 (ENSSGRG00000017828) asb6 (ENSSGRG00000017821) Golden-line barbel MODERN SPECIES 441 ENSSGRG00000020509 abcd1 (ENSSGRG00000020483) ENSSGRG00000020482 zgc:113363 (ENSSGRG00000020479) ENSSGRG00000020478 FGD1 (ENSSGRG00000020400) ENSSGRG00000020398 mecp2 (ENSSGRG00000020397) ENSSGRG00000020396 hcfc1b (ENSSGRG00000019974) cdk20 (ENSSGRG00000019947) #22 cdk20 (ENSSGRG00000019946) #22 ENSSGRG00000019938 HDAC6 (ENSSGRG00000019867) ENSSGRG00000019863 ENSSGRG00000019860 ENSSGRG00000019859 ENSSGRG00000019858 ssuh2rs1 (ENSSGRG00000019857) grip2a (ENSSGRG00000019185) slc6a6a (ENSSGRG00000018659) ABTB1 (ENSSGRG00000018579) ENSSGRG00000018565 gpd1a (ENSSGRG00000018002) asic1a (ENSSGRG00000017998) wdr13 (ENSSGRG00000017828) Common carp reference MODERN SPECIES 23 ENSCCRG00000052636 comta (ENSCCRG00000052635) ENSCCRG00000069480 SRPK3 (ENSCCRG00000080303) ENSCCRG00000030157 abcd1 (ENSCCRG00000025744) ENSCCRG00000025735 cxxc1a (ENSCCRG00000025486) zgc:113363 (ENSCCRG00000025731) tfe3a (ENSCCRG00000025498) ENSCCRG00000021342 ENSCCRG00000021358 mecp2 (ENSCCRG00000062551) ENSCCRG00000021365 hcfc1b (ENSCCRG00000002147) cdk20 (ENSCCRG00000002150) #22 ENSCCRG00000040806 ENSCCRG00000050111 pcsk1nl (ENSCCRG00000072367) ENSCCRG00000002929 ENSCCRG00000043518 ENSCCRG00000071338 ENSCCRG00000067660 ENSCCRG00000029562 ENSCCRG00000079400 ENSCCRG00000020727 ENSCCRG00000045171 ssuh2rs1 (ENSCCRG00000043512) grip2a (ENSCCRG00000011004) slc6a6a (ENSCCRG00000046825) ENSCCRG00000010828 Zebrafish MODERN SPECIES 23 comta (ENSDARG00000015337) CDK16 (ENSDARG00000032072) tsr2 (ENSDARG00000005772) SRPK3 (ENSDARG00000005916) ENSDARG00000032990 abcd1 (ENSDARG00000074876) ENSDARG00000012449 mbd1a (ENSDARG00000101205) cxxc1a (ENSDARG00000101996) zgc:113363 (ENSDARG00000101206) tfe3a (ENSDARG00000098903) FGD1 (ENSDARG00000100402) mecp2 (ENSDARG00000014218) ENSDARG00000025949 hcfc1b (ENSDARG00000012519) cdk20 (ENSDARG00000003867) #22 ENSDARG00000059130 HDAC6 (ENSDARG00000008384) ENSDARG00000076943 pcsk1nl (ENSDARG00000076170) selenoh (ENSDARG00000093022) ssuh2rs1 (ENSDARG00000063292) grip2a (ENSDARG00000087187) slc6a6a (ENSDARG00000012534) ABTB1 (ENSDARG00000063354) ENSDARG00000034836 ENSDARG00000091859 gpd1a (ENSDARG00000043701) asic1a (ENSDARG00000008329) si:ch211-255g12.6 (ENSDARG00000094310) wdr13 (ENSDARG00000022974) Clupeiformes ANCESTRAL SPECIES 80 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000002062 ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b.v ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00940000159855 ENSGT00940000164755.A ENSGT00940000164755.C ENSGT00950000183062.a.b.b.b ENSGT01030000234564.a.a.b.a.e ENSGT00940000166825 ENSGT00940000160063.g.a ENSGT00890000139436.A.b.a ENSGT00940000165955.a ENSGT00940000165056.a ENSGT00730000110895.b.b.c Atlantic herring MODERN SPECIES 20 uxt (ENSCHAG00000000675) zgc:86609 (ENSCHAG00000000813) USP11 (ENSCHAG00000001346) grm6a (ENSCHAG00000003869) abt1 (ENSCHAG00000006011) comta (ENSCHAG00000006027) CDK16 (ENSCHAG00000006163) tsr2 (ENSCHAG00000010385) SRPK3 (ENSCHAG00000010403) PLXNB3 (ENSCHAG00000010819) abcd1 (ENSCHAG00000014730) ENSCHAG00000015450 FGD1 (ENSCHAG00000015518) tfe3a (ENSCHAG00000015756) hcfc1b (ENSCHAG00000015879) cdk20 (ENSCHAG00000016474) #22 ENSCHAG00000016693 HDAC6 (ENSCHAG00000016727) ENSCHAG00000018158 ENSCHAG00000018192 ENSCHAG00000018208 plp2a (ENSCHAG00000018231) sypa (ENSCHAG00000018272) cacna1fb (ENSCHAG00000018435) ENSCHAG00000023464 ENSCHAG00000023470 ENSCHAG00000023482 IQSEC2 (ENSCHAG00000023492) PDZD4 (ENSCHAG00000023531) porcnl (ENSCHAG00000023537) ENSCHAG00000023563 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 1 comta (ENSDCDG00000023828) CDK16 (ENSDCDG00000021622) tsr2 (ENSDCDG00000021609) SRPK3 (ENSDCDG00000020351) PLXNB3 (ENSDCDG00000015001) abcd1 (ENSDCDG00000014869) ENSDCDG00000014860 mbd1a (ENSDCDG00000014854) tfe3a (ENSDCDG00000014843) ENSDCDG00000014841 FGD1 (ENSDCDG00000014316) ENSDCDG00000014265 mecp2 (ENSDCDG00000013979) ENSDCDG00000013911 hcfc1b (ENSDCDG00000013119) cdk20 (ENSDCDG00000013012) #22 ENSDCDG00000012998 HDAC6 (ENSDCDG00000008185) ENSDCDG00000007895 sypa (ENSDCDG00000007864) cacna1fb (ENSDCDG00000003632) ENSDCDG00000003340 ENSDCDG00000003333 IQSEC2 (ENSDCDG00000003279) PDZD4 (ENSDCDG00000003239) porcnl (ENSDCDG00000003101) suv39h1a (ENSDCDG00000031494) gpr173 (ENSDCDG00000031490) ENSDCDG00000031488 sema3gb (ENSDCDG00000031324) wasb (ENSDCDG00000031292) Denticle herring MODERN SPECIES 20 abcd1 (ENSDCDG00000029532) ENSDCDG00000029521 mbd1a (ENSDCDG00000029515) tfe3a (ENSDCDG00000029513) ENSDCDG00000029512 FGD1 (ENSDCDG00000029484) ENSDCDG00000029482 mecp2 (ENSDCDG00000029481) ENSDCDG00000029479 hcfc1b (ENSDCDG00000029255) CDK20 (ENSDCDG00000029248) #22 Euteleosteomorpha ANCESTRAL SPECIES 144 ENSGT00390000002062 ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 Protacanthopterygii ANCESTRAL SPECIES 168 ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00730000111044 ENSGT00940000157503.i.a ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383.d.b ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00940000159855 ENSGT00940000164755.A ENSGT00940000159667.a ENSGT00950000183062.a.b.b.b Northern pike MODERN SPECIES 11 ENSELUG00000019590 klk6 (ENSELUG00000019538) ENSELUG00000033316 ENSELUG00000000854 abcd1 (ENSELUG00000019257) ENSELUG00000019198 ENSELUG00000033414 cxxc1a (ENSELUG00000001459) zgc:113363 (ENSELUG00000019149) tfe3a (ENSELUG00000019126) FGD1 (ENSELUG00000019088) ENSELUG00000019047 mecp2 (ENSELUG00000019038) IRAK1 (ENSELUG00000019026) HCFC1 (ENSELUG00000019004) cdk20 (ENSELUG00000018935) #22 ENSELUG00000018811 HDAC6 (ENSELUG00000018637) ENSELUG00000018589 ENSELUG00000027086 sypa (ENSELUG00000018534) plp2 (ENSELUG00000018563) sypa (ENSELUG00000018525) cacna1fb (ENSELUG00000018501) ENSELUG00000029702 IQSEC2 (ENSELUG00000018384) PDZD4 (ENSELUG00000018376) cry3a (ENSELUG00000018359) ENSELUG00000018321 ENSELUG00000029807 NPBWR2 (ENSELUG00000018281) Salmoninae ANCESTRAL SPECIES 516 ENSGT00940000161969.q ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b.a ENSGT00940000169444 ENSGT00940000158685.ib ENSGT00940000157503.i.a.f ENSGT00940000159438.db.a.b ENSGT00390000003348 ENSGT00530000063687.b.b.b.q ENSGT00940000161383.d.b.a.b ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.g.a ENSGT00940000159855 ENSGT00940000159667.a.e ENSGT00950000183062.a.b.b.b Huchen MODERN SPECIES 5767 cdk20 (ENSHHUG00000033999) #22 ENSHHUG00000034018 Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00950000182945.b.a.a.a.b.b.c.a ENSGT00940000160369.l ENSGT00940000159748 ENSGT00940000161969.q ENSGT01020000230394.e.a.a.b.a.b.e ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b.a ENSGT00940000169444 ENSGT00940000158685.ib ENSGT00940000157503.i.a.f ENSGT00940000159438.db.a.b ENSGT00390000003348 ENSGT00530000063687.b.b.b.q ENSGT00940000161383.d.b.a.b ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.g.a ENSGT00940000159855 ENSGT00940000159667.a.e ENSGT00950000183062.a.b.b.b ENSGT00390000006349 ENSGT00940000163127.c ENSGT00940000160661.e ENSGT00940000155393.d.sb.a.b ENSGT00940000159974.f ENSGT00940000156694.f.a ENSGT01070000253766.B.f.a.f.a ENSGT00400000022086.b.a.a.j.a ENSGT00390000017515.e.b Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000165541.e.b ENSGT00940000165405.i.a.c ENSGT00940000165571 ENSGT00940000159748 ENSGT00940000161969.q ENSGT01020000230394.e.a.a.b.a.b.e ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b.a ENSGT00940000169444 ENSGT00940000158685.ib ENSGT00940000157503.i.a.f ENSGT00940000159438.db.a.b ENSGT00390000003348 ENSGT00530000063687.b.b.b.q ENSGT00940000161383.d.b.a.b ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.g.a ENSGT00940000159855 ENSGT00940000159667.a.e ENSGT00950000183062.a.b.b.b ENSGT00390000006349 ENSGT00940000163127.c ENSGT00940000160661.e ENSGT00940000155393.d.sb.a.b ENSGT00940000159974.f ENSGT00940000156694.f.a ENSGT01070000253766.B.f.a.f.b.a ENSGT00400000022086.b.a.a.j.a ENSGT00390000017515.e.b Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000157504.c.a.c ENSGT00940000158152.a.b ENSGT00940000165405.i.a.c ENSGT00940000165571 ENSGT00940000161969.q ENSGT01020000230394.e.a.a.b.a.b.e ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b.a ENSGT00940000169444 ENSGT00940000158685.ib ENSGT00940000157503.i.a.f ENSGT00940000159438.db.a.b ENSGT00390000003348 ENSGT00530000063687.b.b.b.q ENSGT00940000161383.d.b.a.b ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.g.a ENSGT00940000159855 ENSGT00940000159667.a.e ENSGT00950000183062.a.b.b.b ENSGT00390000006349 ENSGT00940000163127.c ENSGT00940000160661.e ENSGT00940000155393.d.sb.a.a ENSGT00940000159974.f ENSGT00940000156694.f.a ENSGT01070000253766.B.f.a.f.b.a ENSGT00400000022086.b.a.a.j.a ENSGT00390000017515.e.b Chinook salmon MODERN SPECIES 7 gpr157 (ENSOTSG00005004317) ENSOTSG00005004324 slc2a5 (ENSOTSG00005004363) eno1a (ENSOTSG00005006223) AMPD2 (ENSOTSG00005006361) ppdpfb (ENSOTSG00005006376) tpd52l2b (ENSOTSG00005006380) trim101 (ENSOTSG00005006385) DNAJC5 (ENSOTSG00005006387) ENSOTSG00005006388 ENSOTSG00005006437 ENSOTSG00005006439 ENSOTSG00005006440 ENSOTSG00005006443 mecp2 (ENSOTSG00005006444) cdk20 (ENSOTSG00005006451) #22 ENSOTSG00005002399 tfe3a (ENSOTSG00005002414) ENSOTSG00005002423 ENSOTSG00005002427 ENSOTSG00005002435 ENSOTSG00005002451 ENSOTSG00005003873 ENSOTSG00005003876 ENSOTSG00005003877 Coho salmon MODERN SPECIES 8 ENSOKIG00005009337 ENSOKIG00005009327 ENSOKIG00005009325 ENSOKIG00005009315 tktb (ENSOKIG00005009111) ENSOKIG00005007380 abcd1 (ENSOKIG00005006775) ENSOKIG00005006718 ENSOKIG00005006680 zgc:113363 (ENSOKIG00005006669) tfe3a (ENSOKIG00005006585) FGD1 (ENSOKIG00005006502) ENSOKIG00005006475 mecp2 (ENSOKIG00005006465) HCFC1 (ENSOKIG00005006428) cdk20 (ENSOKIG00005006317) #22 HDAC6 (ENSOKIG00005005315) ENSOKIG00005005253 sypa (ENSOKIG00005005240) ENSOKIG00005005227 IQSEC2 (ENSOKIG00005005217) PDZD4 (ENSOKIG00005005201) ENSOKIG00005005190 NPBWR2 (ENSOKIG00005005180) ENSOKIG00005005174 ENSOKIG00005005160 ENSOKIG00005005135 ENSOKIG00005005129 tcea2 (ENSOKIG00005005113) ENSOKIG00005005083 xkr7b (ENSOKIG00005005070) Rainbow trout MODERN SPECIES 30 ENSOMYG00000001446 ENSOMYG00000050570 ENSOMYG00000062107 ENSOMYG00000005600 ENSOMYG00000005652 ENSOMYG00000071167 ENSOMYG00000048100 ENSOMYG00000055007 abcd1 (ENSOMYG00000005141) ENSOMYG00000058619 tfe3a (ENSOMYG00000061427) ENSOMYG00000053748 ENSOMYG00000004820 mecp2 (ENSOMYG00000004898) ENSOMYG00000004957 cdk20 (ENSOMYG00000005019) #22 ENSOMYG00000052768 ENSOMYG00000067666 ENSOMYG00000005037 cacna1fb (ENSOMYG00000072680) ENSOMYG00000077797 ENSOMYG00000053887 ENSOMYG00000064280 ENSOMYG00000069858 ENSOMYG00000064429 ENSOMYG00000074386 ENSOMYG00000062665 ENSOMYG00000005062 ENSOMYG00000048163 ENSOMYG00000017337 oprl1 (ENSOMYG00000071445) Salmo ANCESTRAL SPECIES 16 ENSGT00950000182945.b.a.a.a.b.b.c.a ENSGT00940000160369.l.a ENSGT00940000159748 ENSGT00940000161969.q ENSGT01020000230394.e.a.a.b.a.b.e ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b.a ENSGT00940000169444 ENSGT00940000158685.ib ENSGT00940000157503.i.a.f ENSGT00940000159438.db.b ENSGT00390000003348 ENSGT00530000063687.b.b.b.q ENSGT00940000161383.d.b.a.b ENSGT00940000167532 ENSGT00940000159128 #22 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.g.a ENSGT00940000159855 ENSGT00950000183062.a.b.b.b ENSGT00390000006349 ENSGT00940000163127.c ENSGT00940000160661.e ENSGT00940000155393.d.tb ENSGT00940000159974.f ENSGT00940000156694.f.a ENSGT01070000253766.B.f.a.f.a ENSGT00400000022086.b.a.a.j.a ENSGT00390000017515.f ENSGT00390000017515.e.b River trout MODERN SPECIES 20 ENSSTUG00000007936 lrrc23 (ENSSTUG00000007951) tktb (ENSSTUG00000007986) ENSSTUG00000008731 abcd1 (ENSSTUG00000009273) ENSSTUG00000009695 ENSSTUG00000009737 ENSSTUG00000009814 zgc:113363 (ENSSTUG00000009818) ENSSTUG00000009827 tfe3a (ENSSTUG00000009833) FGD1 (ENSSTUG00000009868) ENSSTUG00000010152 mecp2 (ENSSTUG00000010178) hcfc1b (ENSSTUG00000010191) cdk20 (ENSSTUG00000010459) #22 ENSSTUG00000010493 ENSSTUG00000010770 sypa (ENSSTUG00000010775) ENSSTUG00000010803 ENSSTUG00000010855 ENSSTUG00000010858 NPBWR2 (ENSSTUG00000010865) oprl1 (ENSSTUG00000010880) tcea2 (ENSSTUG00000010896) ENSSTUG00000010909 ENSSTUG00000010919 xkr7b (ENSSTUG00000010925) ENSSTUG00000010951 rps21 (ENSSTUG00000010967) ENSSTUG00000010971 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 6 ENSSSAG00000048260 ENSSSAG00000095322 ENSSSAG00000106860 abcd1 (ENSSSAG00000047976) ENSSSAG00000048040 ENSSSAG00000048105 ENSSSAG00000106351 zgc:113363 (ENSSSAG00000081927) ENSSSAG00000084733 tfe3a (ENSSSAG00000056524) ENSSSAG00000116135 ENSSSAG00000085513 ENSSSAG00000046323 mecp2 (ENSSSAG00000046352) ENSSSAG00000046394 ENSSSAG00000046839 #22 ENSSSAG00000046878 ENSSSAG00000047337 syp (ENSSSAG00000047322) ENSSSAG00000085576 cacna1fb (ENSSSAG00000114587) ENSSSAG00000117982 ENSSSAG00000099619 ENSSSAG00000114077 ENSSSAG00000047352 ENSSSAG00000047427 ENSSSAG00000047923 ENSSSAG00000047940 ENSSSAG00000084524 oprl1 (ENSSSAG00000092179) ENSSSAG00000096344 Atlantic salmon MODERN SPECIES 13 ENSSSAG00000119690 ENSSSAG00000081059 ENSSSAG00000109366 ENSSSAG00000114573 crygm6 (ENSSSAG00000058473) ENSSSAG00000100402 pikfyve (ENSSSAG00000081108) ANKRD44 (ENSSSAG00000081383) ENSSSAG00000120274 SF3B1 (ENSSSAG00000081423) coq10b (ENSSSAG00000081427) hspd1 (ENSSSAG00000081432) hspe1 (ENSSSAG00000081441) MOB4 (ENSSSAG00000081444) rftn2 (ENSSSAG00000111108) ENSSSAG00000094048 #22 PLCL1 (ENSSSAG00000053340) ENSSSAG00000088810 ENSSSAG00000053311 satb2 (ENSSSAG00000053203) dnajb11 (ENSSSAG00000111994) ENSSSAG00000116518 ENSSSAG00000052141 rab5b (ENSSSAG00000084227) dbr1 (ENSSSAG00000052088) armc8 (ENSSSAG00000049392) ENSSSAG00000049141 idh1 (ENSSSAG00000048877) ENSSSAG00000091454 ENSSSAG00000104346 fzd5 (ENSSSAG00000120506) Acanthomorphata ANCESTRAL SPECIES 156 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000161689 ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00730000111044 ENSGT00940000155480.d ENSGT00940000158685 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Cod MODERN SPECIES ENSGMOG00000026598 mecp2 (ENSGMOG00000033006) ENSGMOG00000028039 ENSGMOG00000005659 ENSGMOG00000036650 cxxc1a (ENSGMOG00000019497) ENSGMOG00000001806 ENSGMOG00000018842 ENSGMOG00000010054 ENSGMOG00000037160 slc35a2 (ENSGMOG00000006626) otud5a (ENSGMOG00000027301) ENSGMOG00000006603 ENSGMOG00000035986 uxt (ENSGMOG00000008520) ENSGMOG00000008512 #22 ENSGMOG00000017533 ENSGMOG00000010087 plxna3 (ENSGMOG00000010058) ENSGMOG00000010541 kcnd1 (ENSGMOG00000008556) ENSGMOG00000035391 ENSGMOG00000013477 ENSGMOG00000028595 ENSGMOG00000013500 ENSGMOG00000012713 ENSGMOG00000036388 ENSGMOG00000012704 ENSGMOG00000036185 ENSGMOG00000018119 ENSGMOG00000018105 Euacanthomorphacea ANCESTRAL SPECIES 61 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b Pinecone sodierfish MODERN SPECIES 21 gripap1 (ENSMMDG00005019692) ptpn18 (ENSMMDG00005019678) plxna3 (ENSMMDG00005019591) ENSMMDG00005019576 ENSMMDG00005019574 ENSMMDG00005019573 ENSMMDG00005019572 bcap31 (ENSMMDG00005019569) slc6a8 (ENSMMDG00005019566) slc35a2 (ENSMMDG00005019564) pim2 (ENSMMDG00005019562) otud5a (ENSMMDG00005019560) ENSMMDG00005019557 ENSMMDG00005019555 uxt (ENSMMDG00005019554) cdk20 (ENSMMDG00005019552) #22 ENSMMDG00005019551 ENSMMDG00005019548 cacna1fb (ENSMMDG00005019540) SYP (ENSMMDG00005019406) ENSMMDG00005019395 ENSMMDG00005019393 HDAC6 (ENSMMDG00005018921) cxxc1a (ENSMMDG00005018914) ENSMMDG00005018911 FGD1 (ENSMMDG00005018890) ENSMMDG00005018884 ENSMMDG00005018881 mecp2 (ENSMMDG00005018815) ENSMMDG00005018810 hcfc1b (ENSMMDG00005018736) Percomorphaceae ANCESTRAL SPECIES 36 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Tiger tail seahorse MODERN SPECIES 514 ENSHCOG00000011862 ENSHCOG00000011826 ENSHCOG00000011814 zgc:86609 (ENSHCOG00000011756) USP11 (ENSHCOG00000011722) rfc2 (ENSHCOG00000011613) ENSHCOG00000011593 ENSHCOG00000011542 ACAP3 (ENSHCOG00000011504) ENSHCOG00000011281 FGD1 (ENSHCOG00000011257) ENSHCOG00000011210 CXXC1 (ENSHCOG00000011061) ENSHCOG00000010920 cdk20 (ENSHCOG00000010897) #22 cacna1fb (ENSHCOG00000010548) sypa (ENSHCOG00000004501) ENSHCOG00000004479 ENSHCOG00000004463 uxt (ENSHCOG00000004409) ENSHCOG00000004390 ENSHCOG00000004378 ENSHCOG00000004364 crygs3 (ENSHCOG00000000666) smc5 (ENSHCOG00000004349) ELAPOR1 (ENSHCOG00000004323) MAPK14 (ENSHCOG00000004282) srpk1a (ENSHCOG00000004263) lhfpl5b (ENSHCOG00000004253) cpne5a (ENSHCOG00000004236) Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Atherinomorphae ANCESTRAL SPECIES 50 ENSGT00940000158963.a ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00940000155869 ENSGT00390000011863.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Oryzias ANCESTRAL SPECIES 45 ENSGT00950000183126.a.p.b ENSGT00940000153497.A ENSGT00610000087015 ENSGT00940000160546 ENSGT00940000163942.b ENSGT00940000158374.c ENSGT00510000048446 ENSGT00390000013740 ENSGT00940000178358 ENSGT01100000264848 ENSGT00950000182931.A.a.b ENSGT00940000153544.a.i.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000164755.A.b ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 Oryzias_b ANCESTRAL SPECIES 48 ENSGT00950000183126.a.p.b ENSGT00940000153497.A ENSGT00610000087015 ENSGT00940000160546 ENSGT00940000163942.b ENSGT00940000158374.c ENSGT00510000048446 ENSGT00390000013740 ENSGT00940000178358 ENSGT01100000264848 ENSGT00950000182931.A.a.b ENSGT00940000153544.a.i.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000164755.A.b ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a Indian medaka MODERN SPECIES 23 ENSOMEG00000012773 rfc2 (ENSOMEG00000012761) USP11 (ENSOMEG00000012729) zgc:86609 (ENSOMEG00000012695) SKI (ENSOMEG00000012669) si:ch211-251b21.1 (ENSOMEG00000012629) plch2a (ENSOMEG00000012519) pex10 (ENSOMEG00000012307) renbp (ENSOMEG00000012291) ENSOMEG00000000306 dennd2da (ENSOMEG00000000303) stk38a (ENSOMEG00000012145) ENSOMEG00000012103 ENSOMEG00000012072 uxt (ENSOMEG00000012056) cdk20 (ENSOMEG00000012028) #22 ENSOMEG00000011995 ENSOMEG00000011973 ENSOMEG00000011964 sypa (ENSOMEG00000011916) ENSOMEG00000011782 ENSOMEG00000011758 CXXC1 (ENSOMEG00000011705) ENSOMEG00000011663 FGD1 (ENSOMEG00000011622) abt1 (ENSOMEG00000011593) rad51c (ENSOMEG00000011578) GRM6 (ENSOMEG00000011505) tsr2 (ENSOMEG00000011483) ENSOMEG00000011469 SRPK3 (ENSOMEG00000011459) Javanese ricefish MODERN SPECIES 21 EPHB2 (ENSOJAG00000010537) LRRC38 (ENSOJAG00000010413) mthfr (ENSOJAG00000009657) ENSOJAG00000009590 ENSOJAG00000009584 renbp (ENSOJAG00000009223) pex10 (ENSOJAG00000009201) ENSOJAG00000009166 plch2a (ENSOJAG00000008979) skia (ENSOJAG00000008868) prkcz (ENSOJAG00000008100) dennd2da (ENSOJAG00000007970) stk38a (ENSOJAG00000007879) ENSOJAG00000007805 uxt (ENSOJAG00000007790) cdk20 (ENSOJAG00000007754) #22 ENSOJAG00000007688 SYP (ENSOJAG00000005032) ENSOJAG00000005018 ENSOJAG00000004339 CXXC1 (ENSOJAG00000004282) TFE3 (ENSOJAG00000004250) ENSOJAG00000004234 FGD1 (ENSOJAG00000004025) abt1 (ENSOJAG00000003999) ENSOJAG00000003947 grm6a (ENSOJAG00000003817) ENSOJAG00000003748 SRPK3 (ENSOJAG00000003070) abcd1 (ENSOJAG00000002175) ENSOJAG00000002120 Oryzias_a ANCESTRAL SPECIES 54 ENSGT00950000183126.a.p.a ENSGT00950000183126.a.p.b ENSGT00940000153497.A ENSGT00610000087015 ENSGT00940000160546 ENSGT00940000158374.c ENSGT00510000048446 ENSGT00390000013740 ENSGT00940000178358 ENSGT01100000264848 ENSGT00950000182931.A.a.b ENSGT00940000153544.a.i.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 4650 cdk20 (ENSOSIG00000003583) #22 Chinese medaka MODERN SPECIES 5198 cdk20 (ENSOSIG00000003927) #22 Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000022931 si:ch211-251b21.1 (ENSORLG00000016860) ENSORLG00000028134 plch2a (ENSORLG00000016877) ENSORLG00000029302 pex10 (ENSORLG00000016884) ENSORLG00000016889 renbp (ENSORLG00000016904) ENSORLG00000027554 ENSORLG00000016906 dennd2da (ENSORLG00000020542) stk38a (ENSORLG00000016924) ENSORLG00000016935 ENSORLG00000016950 uxt (ENSORLG00000027697) cdk20 (ENSORLG00000016961) #22 ENSORLG00000022369 ENSORLG00000025450 ENSORLG00000022560 ENSORLG00000022121 ENSORLG00000016984 ENSORLG00000023272 sypa (ENSORLG00000025491) ENSORLG00000022058 ENSORLG00000029710 ENSORLG00000019591 ENSORLG00000024356 ENSORLG00000029338 FGD1 (ENSORLG00000030210) ENSORLG00000020512 ENSORLG00000028293 Cyprinodontiformes ANCESTRAL SPECIES 46 ENSGT00940000158963.a ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00940000155869 ENSGT00390000011863.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000159247.m ENSGT00940000169444 ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Cyprinodontoidei ANCESTRAL SPECIES 57 ENSGT00940000158963.a ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00940000155869 ENSGT00390000011863.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000159247.m ENSGT00940000169444 ENSGT00940000164755.A ENSGT00940000159855 ENSGT00940000164472.a.a.b.b.a.a.a.a ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Poeciliinae ANCESTRAL SPECIES 45 ENSGT00940000158963.a ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00940000155869 ENSGT00390000011863.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868.g ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT00940000169444 ENSGT00940000164755.A ENSGT00940000159855 ENSGT00940000164472.a.a.b.b.a.a.a.a ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Poecilia ANCESTRAL SPECIES 79 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT00940000169444 ENSGT00940000164755.A ENSGT00940000159855 ENSGT00940000164472.a.a.b.b.a.a.a.a ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 NAME_6 ANCESTRAL SPECIES 483 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000169444 ENSGT00940000164755.A Sailfin molly MODERN SPECIES 2675 cdk20 (ENSPLAG00000002191) #22 ENSPLAG00000002177 ENSPLAG00000002164 ENSPLAG00000002149 Amazon molly MODERN SPECIES 1104 ENSPFOG00000024291 mecp2 (ENSPFOG00000002307) ENSPFOG00000002231 ENSPFOG00000023647 cdk20 (ENSPFOG00000002224) #22 ENSPFOG00000023863 Guppy MODERN SPECIES 9 kcnd1 (ENSPREG00000011841) st14b (ENSPREG00000011879) ENSPREG00000011952 ENSPREG00000011961 uxt (ENSPREG00000011973) cdk20 (ENSPREG00000012025) #22 ENSPREG00000012108 ENSPREG00000012119 cacna1fb (ENSPREG00000012143) ENSPREG00000012233 sypa (ENSPREG00000012259) ENSPREG00000012354 HDAC6 (ENSPREG00000012414) cxxc1a (ENSPREG00000012472) ENSPREG00000012507 ENSPREG00000012514 FGD1 (ENSPREG00000012524) ENSPREG00000012549 mecp2 (ENSPREG00000012585) ENSPREG00000012629 ENSPREG00000012748 Platyfish MODERN SPECIES otud5a (ENSXMAG00000013211) pim2 (ENSXMAG00000013220) ENSXMAG00000024874 slc35a2 (ENSXMAG00000007115) slc6a8 (ENSXMAG00000013815) bcap31 (ENSXMAG00000027837) ENSXMAG00000024982 ENSXMAG00000022358 ENSXMAG00000018757 ptpn18 (ENSXMAG00000018760) gripap1 (ENSXMAG00000015220) kcnd1 (ENSXMAG00000015183) st14b (ENSXMAG00000025664) ENSXMAG00000024597 ENSXMAG00000001372 cdk20 (ENSXMAG00000001385) #22 ENSXMAG00000022112 ENSXMAG00000021321 ENSXMAG00000029137 ENSXMAG00000022561 ENSXMAG00000024741 ENSXMAG00000021723 sypa (ENSXMAG00000001545) ENSXMAG00000006655 ENSXMAG00000013014 cxxc1a (ENSXMAG00000013043) ENSXMAG00000021186 ENSXMAG00000003547 FGD1 (ENSXMAG00000003528) ENSXMAG00000025932 ENSXMAG00000021429 NAME_4 ANCESTRAL SPECIES 162 ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000159247.m ENSGT00940000164755.C ENSGT00940000164755.A ENSGT00940000164472.a.a.b.b.a.a.a.a ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Mummichog MODERN SPECIES 785 kcnd1 (ENSFHEG00000012811) st14b (ENSFHEG00000012780) ENSFHEG00000012760 ELK1 (ENSFHEG00000012750) uxt (ENSFHEG00000012737) cdk20 (ENSFHEG00000012599) #22 ENSFHEG00000012564 ENSFHEG00000012562 Sheepshead minnow MODERN SPECIES 140 cdk20 (ENSCVAG00000008666) #22 ENSCVAG00000008653 ENSCVAG00000008649 ENSCVAG00000008635 cacna1fb (ENSCVAG00000008470) sypa (ENSCVAG00000002124) ENSCVAG00000002115 ENSCVAG00000002108 cxxc1a (ENSCVAG00000002083) ENSCVAG00000001963 TFE3 (ENSCVAG00000001957) FGD1 (ENSCVAG00000001930) ENSCVAG00000001919 mecp2 (ENSCVAG00000001916) ENSCVAG00000001909 ENSCVAG00000001900 Aplocheiloidei ANCESTRAL SPECIES 224 ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000159247.m Turquoise killifish MODERN SPECIES 1624 cxxc1a (ENSNFUG00015022848) HDAC6 (ENSNFUG00015022882) ENSNFUG00015023118 sypa (ENSNFUG00015023119) ENSNFUG00015023120 ENSNFUG00015023199 PLXNA3 (ENSNFUG00015023270) ENSNFUG00015023511 gripap1 (ENSNFUG00015023514) kcnd1 (ENSNFUG00015023528) st14b (ENSNFUG00015023531) Nfu_g_1_015622 (ENSNFUG00015023537) ENSNFUG00015023545 ENSNFUG00015023547 UXT (ENSNFUG00015023549) cdk20 (ENSNFUG00015023559) #22 ENSNFUG00015023566 ENSNFUG00015023569 ENSNFUG00015023574 ENSNFUG00015023578 ENSNFUG00015023582 EDEM2 (ENSNFUG00015023587) Nfu_g_1_015548 (ENSNFUG00015023602) SNX21 (ENSNFUG00015023603) ENSNFUG00015023608 ENSNFUG00015023612 hm13 (ENSNFUG00015023618) ENSNFUG00015023710 ENSNFUG00015023714 ENSNFUG00015023718 ENSNFUG00015023722 Mangrove rivulus MODERN SPECIES 1167 ENSKMAG00000004473 #22 ENSKMAG00000004460 Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Pomacentridae ANCESTRAL SPECIES 94 ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c.n ENSGT01050000244850.A.a.p ENSGT00390000011863.c.m ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 Bicolor damselfish MODERN SPECIES 1089 ENSSPAG00000007242 ELK1 (ENSSPAG00000007223) uxt (ENSSPAG00000007203) cdk20 (ENSSPAG00000007188) #22 ENSSPAG00000007173 cacna1fb (ENSSPAG00000007117) ENSSPAG00000007080 otud5a (ENSSPAG00000007048) slc35a2 (ENSSPAG00000007006) slc6a8 (ENSSPAG00000006980) slc6a8 (ENSSPAG00000006961) Pomacentridae_A ANCESTRAL SPECIES 92 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT01050000244850.A.a.p ENSGT00390000011863.c.m ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 Spiny chromis MODERN SPECIES 877 lmo3 (ENSAPOG00000023283) bcap31 (ENSAPOG00000023314) slc6a8 (ENSAPOG00000023347) slc35a2 (ENSAPOG00000023413) otud5a (ENSAPOG00000023469) ENSAPOG00000023494 ENSAPOG00000023533 uxt (ENSAPOG00000023572) cdk20 (ENSAPOG00000023621) #22 Amphiprion ANCESTRAL SPECIES 119 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT01050000244850.A.a.p ENSGT00390000011863.c.m ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 Orange clownfish MODERN SPECIES 22 kcnd1 (ENSAPEG00000023041) gripap1 (ENSAPEG00000023013) ptpn18 (ENSAPEG00000022989) ENSAPEG00000022970 ENSAPEG00000022962 ENSAPEG00000022958 ENSAPEG00000022940 bcap31 (ENSAPEG00000022924) slc6a8 (ENSAPEG00000022897) slc35a2 (ENSAPEG00000022878) pim2 (ENSAPEG00000022862) otud5a (ENSAPEG00000022848) ENSAPEG00000022700 ENSAPEG00000022596 uxt (ENSAPEG00000022571) cdk20 (ENSAPEG00000022552) #22 ENSAPEG00000022543 ENSAPEG00000022473 cacna1fb (ENSAPEG00000022410) ENSAPEG00000022386 ENSAPEG00000022382 ENSAPEG00000022374 PDZD4 (ENSAPEG00000022347) ENSAPEG00000022306 ENSAPEG00000022291 ENSAPEG00000022277 atp6ap1a (ENSAPEG00000022262) tafazzin (ENSAPEG00000022234) ENSAPEG00000022227 ndnl2 (ENSAPEG00000022215) ENSAPEG00000022125 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 400 uxt (ENSAOCG00000016238) cdk20 (ENSAOCG00000016257) #22 Clown anemonefish MODERN SPECIES 299 cdk20 (ENSAOCG00000024395) #22 Cichlidae ANCESTRAL SPECIES ENSGT00940000157212.A ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Midas cichlid MODERN SPECIES 129 slc35a2 (ENSACIG00000003659) pim2 (ENSACIG00000003679) otud5a (ENSACIG00000003728) ENSACIG00000003747 ENSACIG00000003790 uxt (ENSACIG00000003803) cdk20 (ENSACIG00000003831) #22 ENSACIG00000003854 ENSACIG00000003865 ENSACIG00000003885 cacna1fb (ENSACIG00000003899) sypa (ENSACIG00000004022) sypa (ENSACIG00000004050) ENSACIG00000004183 HDAC6 (ENSACIG00000004282) cxxc1a (ENSACIG00000004393) TFE3 (ENSACIG00000004421) FGD1 (ENSACIG00000004445) ENSACIG00000004515 ENSACIG00000004533 ENSACIG00000004554 ENSACIG00000004586 Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b.b ENSGT00940000164481.b.b.a.b.a ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c.s ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g.e ENSGT01030000234637.b.c.g.f ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Nile tilapia MODERN SPECIES 12 plxna3 (ENSONIG00000014622) ENSONIG00000033808 bcap31 (ENSONIG00000014613) slc6a8 (ENSONIG00000014610) ENSONIG00000034502 slc35a2 (ENSONIG00000014609) pim2 (ENSONIG00000038019) ENSONIG00000037732 otud5a (ENSONIG00000014602) ENSONIG00000014599 ENSONIG00000036921 ENSONIG00000014594 ENSONIG00000027544 ENSONIG00000037518 uxt (ENSONIG00000040917) cdk20 (ENSONIG00000014585) #22 ENSONIG00000032993 ENSONIG00000042644 ENSONIG00000014582 ENSONIG00000041396 ENSONIG00000040491 ENSONIG00000039102 ENSONIG00000027643 ENSONIG00000004095 ENSONIG00000034231 ENSONIG00000030908 ENSONIG00000042149 ENSONIG00000033574 ENSONIG00000039893 ENSONIG00000013605 ENSONIG00000040435 Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b.b ENSGT00940000164481.b.b.a.b.a ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c.s ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g.e ENSGT01030000234637.b.c.g.f ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Lyretail cichlid MODERN SPECIES 397 ENSNBRG00000010409 ENSNBRG00000010382 ENSNBRG00000010362 kcnd1 (ENSNBRG00000010338) gripap1 (ENSNBRG00000010193) plxna3 (ENSNBRG00000010108) bcap31 (ENSNBRG00000010062) slc6a8 (ENSNBRG00000010042) slc6a8 (ENSNBRG00000010026) slc35a2 (ENSNBRG00000010015) pim2 (ENSNBRG00000010000) otud5a (ENSNBRG00000009988) ENSNBRG00000009968 ENSNBRG00000009958 ENSNBRG00000009951 cdk20 (ENSNBRG00000009932) #22 ENSNBRG00000009922 ENSNBRG00000009878 ENSNBRG00000009856 ENSNBRG00000009843 cacna1fb (ENSNBRG00000009240) sypa (ENSNBRG00000008996) sypa (ENSNBRG00000008978) ENSNBRG00000008903 HDAC6 (ENSNBRG00000008791) cxxc1a (ENSNBRG00000008635) ENSNBRG00000008595 TFE3 (ENSNBRG00000008566) FGD1 (ENSNBRG00000008517) ENSNBRG00000008488 mecp2 (ENSNBRG00000008411) Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b.b ENSGT00940000164481.b.b.a.b.a ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c.s ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g.e ENSGT01030000234637.b.c.g.f ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Burton s mouthbrooder MODERN SPECIES 396 st14b (ENSHBUG00000019118) kcnd1 (ENSHBUG00000019152) gripap1 (ENSHBUG00000019186) ENSHBUG00000019204 plxna3 (ENSHBUG00000019337) bcap31 (ENSHBUG00000019391) slc6a8 (ENSHBUG00000019411) ENSHBUG00000019418 slc35a2 (ENSHBUG00000019448) pim2 (ENSHBUG00000019471) otud5a (ENSHBUG00000019501) ENSHBUG00000019517 ENSHBUG00000019545 uxt (ENSHBUG00000019558) cdk20 (ENSHBUG00000019590) #22 ENSHBUG00000019603 cacna1fb (ENSHBUG00000020008) sypa (ENSHBUG00000020041) sypa (ENSHBUG00000020057) ENSHBUG00000000790 HDAC6 (ENSHBUG00000020208) cxxc1a (ENSHBUG00000020227) zgc:113363 (ENSHBUG00000020240) TFE3 (ENSHBUG00000020599) FGD1 (ENSHBUG00000020661) ENSHBUG00000020689 ENSHBUG00000020716 ENSHBUG00000020760 ENSHBUG00000020787 ENSHBUG00000020813 Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b.b ENSGT00940000164481.b.b.a.b.a ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c.s ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT00940000159855 ENSGT01030000234637.b.c.g.e ENSGT01030000234637.b.c.g.f ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a P. nyererei MODERN SPECIES 568 kcnd1 (ENSPNYG00000002461) gripap1 (ENSPNYG00000002539) ptpn18 (ENSPNYG00000002789) plxna3 (ENSPNYG00000002864) bcap31 (ENSPNYG00000002984) slc6a8 (ENSPNYG00000003021) slc35a2 (ENSPNYG00000003069) pim2 (ENSPNYG00000003102) otud5a (ENSPNYG00000003117) ENSPNYG00000003179 ELK1 (ENSPNYG00000003278) uxt (ENSPNYG00000003294) cdk20 (ENSPNYG00000003319) #22 ENSPNYG00000003353 ENSPNYG00000003365 si:ch211-165i18.2 (ENSPNYG00000003385) Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000164481.b.b.a.a ENSGT00940000164481.b.b.a.b.b ENSGT00940000164481.b.b.a.b.a ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c.s ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT00940000159855 ENSGT01030000234637.b.c.g.e ENSGT01030000234637.b.c.g.f ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a Zebra mbuna MODERN SPECIES 168 slc35a2 (ENSMZEG00005024045) pim2 (ENSMZEG00005024047) otud5a (ENSMZEG00005024049) ENSMZEG00005024051 ENSMZEG00005024052 uxt (ENSMZEG00005024054) cdk20 (ENSMZEG00005024055) #22 ENSMZEG00005024058 ENSMZEG00005024061 si:ch211-165i18.2 (ENSMZEG00005024062) ENSMZEG00005024063 Eastern happy MODERN SPECIES 12 st14b (ENSACLG00000012206) kcnd1 (ENSACLG00000012341) gripap1 (ENSACLG00000012389) ptpn18 (ENSACLG00000012671) plxna3 (ENSACLG00000012810) ENSACLG00000012939 bcap31 (ENSACLG00000012951) slc6a8 (ENSACLG00000012965) slc35a2 (ENSACLG00000012974) pim2 (ENSACLG00000012986) otud5a (ENSACLG00000012993) ENSACLG00000012995 ENSACLG00000013127 ENSACLG00000013136 uxt (ENSACLG00000013141) cdk20 (ENSACLG00000013168) #22 ENSACLG00000013207 ENSACLG00000013217 ENSACLG00000013224 ENSACLG00000013234 ENSACLG00000013244 SYP (ENSACLG00000013253) sypa (ENSACLG00000013420) ENSACLG00000013430 HDAC6 (ENSACLG00000013440) cxxc1a (ENSACLG00000013463) ENSACLG00000013610 TFE3 (ENSACLG00000013619) FGD1 (ENSACLG00000013633) ENSACLG00000013662 ENSACLG00000013679 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000159128 #22 Fugu MODERN SPECIES 15 zgc:103759 (ENSTRUG00000006215) ARHGAP4 (ENSTRUG00000006232) fam50a (ENSTRUG00000006877) ENSTRUG00000020207 sars1 (ENSTRUG00000007166) ENSTRUG00000027280 sdcbp2 (ENSTRUG00000007644) nsfl1c (ENSTRUG00000007860) NTSR1 (ENSTRUG00000008186) ENSTRUG00000025131 phc2a (ENSTRUG00000008232) si:dkeyp-104h9.5 (ENSTRUG00000008296) icmt (ENSTRUG00000008357) plod1 (ENSTRUG00000008466) tpx2 (ENSTRUG00000009240) cdk20 (ENSTRUG00000009502) #22 ndufb11 (ENSTRUG00000026600) renbp (ENSTRUG00000009621) rcc2 (ENSTRUG00000009784) rtel1 (ENSTRUG00000009890) tbc1d25 (ENSTRUG00000021530) ENSTRUG00000031764 ENSTRUG00000010639 ENSTRUG00000030349 gtf2h5 (ENSTRUG00000023487) ENSTRUG00000028914 ENSTRUG00000029902 ENSTRUG00000017717 casp9 (ENSTRUG00000017702) ENSTRUG00000030352 ENSTRUG00000028006 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000003736 CALHM3 (ENSTNIG00000003737) hells (ENSTNIG00000003738) ENSTNIG00000000118 ENSTNIG00000003740 ENSTNIG00000003743 si:cabz01090165.1 (ENSTNIG00000003744) ENSTNIG00000000531 ENSTNIG00000003745 ENSTNIG00000003746 ENSTNIG00000003747 ENSTNIG00000003752 ENSTNIG00000003755 ENSTNIG00000003758 ENSTNIG00000003759 ENSTNIG00000003760 #22 tbc1d25 (ENSTNIG00000003761) ENSTNIG00000003762 rcc2 (ENSTNIG00000003763) renbp (ENSTNIG00000003764) itpr3 (ENSTNIG00000003765) ENSTNIG00000003771 STT3B (ENSTNIG00000003772) ADRA1D (ENSTNIG00000003773) ENSTNIG00000000750 ENSTNIG00000003783 ENSTNIG00000001127 ENSTNIG00000003784 ENSTNIG00000003788 ENSTNIG00000003793 adnpb (ENSTNIG00000003794) Tetraodon MODERN SPECIES 26 pmpca (ENSTNIG00000019531) ENSTNIG00000019614 ENSTNIG00000005504 apobec2a (ENSTNIG00000000696) ENSTNIG00000001051 ENSTNIG00000019470 ENSTNIG00000019723 ENSTNIG00000019545 zdhhc5a (ENSTNIG00000019681) ENSTNIG00000019534 ENSTNIG00000019437 rdh5 (ENSTNIG00000019647) ENSTNIG00000019543 ENSTNIG00000019539 ENSTNIG00000019504 cdk20 (ENSTNIG00000019530) #22 src (ENSTNIG00000019527) ENSTNIG00000019439 ENSTNIG00000019497 ENSTNIG00000019538 akirin1 (ENSTNIG00000019785) ENSTNIG00000000658 lnx2b (ENSTNIG00000019789) stat3 (ENSTNIG00000019687) ENSTNIG00000019475 ENSTNIG00000019555 psmb7 (ENSTNIG00000019654) reep5 (ENSTNIG00000019441) ENSTNIG00000019711 ndufv1 (ENSTNIG00000019833) ENSTNIG00000019665 Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 3895 ENSLBEG00000019934 cdk20 (ENSLBEG00000019961) #22 Ballan wrasse MODERN SPECIES 1435 ENSLBEG00000007730 uxt (ENSLBEG00000007687) cdk20 (ENSLBEG00000007641) #22 Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00990000210258 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Perciformes ANCESTRAL SPECIES 37 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT01100000264948 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT00940000164755.A ENSGT00940000159855 ENSGT00530000063687.b.b.b ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 Cottioidei ANCESTRAL SPECIES 47 ENSGT00940000155472.a.a ENSGT00940000164481.b.b ENSGT00940000157212.A ENSGT00940000159657.d.h ENSGT01100000263518.B.b.a.a ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000164755.A ENSGT00940000159855 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g ENSGT00940000160502 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g Lumpfish MODERN SPECIES 22 ENSCLMG00005000598 arl8a (ENSCLMG00005000596) GPR37L1 (ENSCLMG00005000595) ENSCLMG00005000594 ENSCLMG00005000593 ENSCLMG00005000586 plxna3 (ENSCLMG00005000582) bcap31 (ENSCLMG00005000579) slc6a8 (ENSCLMG00005000577) slc35a2 (ENSCLMG00005000574) pim2 (ENSCLMG00005000570) otud5a (ENSCLMG00005000565) ENSCLMG00005000563 ELK1 (ENSCLMG00005000560) uxt (ENSCLMG00005000558) cdk20 (ENSCLMG00005000555) #22 cacna1fb (ENSCLMG00005000553) mecp2 (ENSCLMG00005000547) ENSCLMG00005000541 FGD1 (ENSCLMG00005000537) TFE3 (ENSCLMG00005000535) ENSCLMG00005000534 cxxc1a (ENSCLMG00005000489) ENSCLMG00005000208 ENSCLMG00005000133 sypa (ENSCLMG00005000117) ENSCLMG00005000110 ENSCLMG00005000096 ENSCLMG00005000075 ENSCLMG00005017751 ENSCLMG00005017746 Stickleback MODERN SPECIES 131 ENSGACG00000000818 ENSGACG00000000816 uxt (ENSGACG00000000814) cdk20 (ENSGACG00000000810) #22 ENSGACG00000000805 cacna1fb (ENSGACG00000000800) mecp2 (ENSGACG00000000798) ENSGACG00000000796 ENSGACG00000000795 ENSGACG00000000794 Perciformes_a ANCESTRAL SPECIES 69 ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT01100000264948 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT00940000164755.A ENSGT00940000159855 ENSGT00530000063687.b.b.b Pike perch MODERN SPECIES 96 gripap1 (ENSSLUG00000024347) ENSSLUG00000024677 ptpn18 (ENSSLUG00000024680) ENSSLUG00000024685 plxna3 (ENSSLUG00000024742) bcap31 (ENSSLUG00000024852) slc6a8 (ENSSLUG00000024862) slc35a2 (ENSSLUG00000024890) pim2 (ENSSLUG00000024904) otud5a (ENSSLUG00000024925) ENSSLUG00000024928 ENSSLUG00000024933 ENSSLUG00000024936 ENSSLUG00000024940 uxt (ENSSLUG00000024941) cdk20 (ENSSLUG00000024943) #22 ENSSLUG00000024945 cacna1fb (ENSSLUG00000001514) ENSSLUG00000001620 ENSSLUG00000001658 ENSSLUG00000001667 FGD1 (ENSSLUG00000001674) ENSSLUG00000001688 ENSSLUG00000001694 ENSSLUG00000001700 cxxc1a (ENSSLUG00000001738) ENSSLUG00000001926 ENSSLUG00000002307 sypa (ENSSLUG00000002310) ENSSLUG00000002315 ENSSLUG00000002325 Channel bull blenny MODERN SPECIES 192 ENSCGOG00000002792 uxt (ENSCGOG00000002736) cdk20 (ENSCGOG00000002632) #22 Eupecaria_C ANCESTRAL SPECIES 31 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004377 st14b (ENSSAUG00010004366) ENSSAUG00010004346 ENSSAUG00010004328 gripap1 (ENSSAUG00010000968) ENSSAUG00010000881 ENSSAUG00010000879 plxna3 (ENSSAUG00010000551) bcap31 (ENSSAUG00010000436) slc6a8 (ENSSAUG00010000427) slc35a2 (ENSSAUG00010000411) pim2 (ENSSAUG00010000399) otud5a (ENSSAUG00010000379) ENSSAUG00010000363 uxt (ENSSAUG00010000346) cdk20 (ENSSAUG00010000332) #22 ENSSAUG00010000310 ENSSAUG00010022056 ENSSAUG00010022054 cacna1fb (ENSSAUG00010020946) ENSSAUG00010020930 ENSSAUG00010020928 ENSSAUG00010020876 ENSSAUG00010020874 ENSSAUG00010020873 ENSSAUG00010020871 ENSSAUG00010020828 ENSSAUG00010020809 abcd1 (ENSSAUG00010020753) ENSSAUG00010020751 ENSSAUG00010020741 Eupercaria_incertae_sedis ANCESTRAL SPECIES 42 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Large yellow croaker MODERN SPECIES 29 snx21 (ENSLCRG00005002771) ENSLCRG00005002745 kcnd1 (ENSLCRG00005002725) gripap1 (ENSLCRG00005002643) ptpn18 (ENSLCRG00005002490) plxna3 (ENSLCRG00005002156) bcap31 (ENSLCRG00005021414) slc6a8 (ENSLCRG00005021393) slc35a2 (ENSLCRG00005021388) pim2 (ENSLCRG00005021369) otud5a (ENSLCRG00005021366) ENSLCRG00005021351 ENSLCRG00005021350 ENSLCRG00005021349 uxt (ENSLCRG00005021348) cdk20 (ENSLCRG00005021327) #22 ENSLCRG00005021172 ENSLCRG00005021163 sypa (ENSLCRG00005021160) cacna1fb (ENSLCRG00005021100) ENSLCRG00005021098 CXXC1 (ENSLCRG00005021056) ENSLCRG00005021054 TFE3 (ENSLCRG00005021053) FGD1 (ENSLCRG00005020901) ENSLCRG00005020895 mecp2 (ENSLCRG00005020893) ENSLCRG00005020885 ENSLCRG00005020884 ENSLCRG00005020882 abcd1 (ENSLCRG00005020298) European seabass MODERN SPECIES 14 ENSDLAG00005004037 kcnd1 (ENSDLAG00005031354) ENSDLAG00005029977 gripap1 (ENSDLAG00005030091) ptpn18 (ENSDLAG00005027988) plxna3 (ENSDLAG00005034439) ENSDLAG00005026839 ENSDLAG00005017434 slc35a2 (ENSDLAG00005026420) pim2 (ENSDLAG00005029998) ENSDLAG00005031156 otud5a (ENSDLAG00005017971) ENSDLAG00005017906 ENSDLAG00005032699 ENSDLAG00005023471 ENSDLAG00005028442 #22 ENSDLAG00005031568 ENSDLAG00005033843 ENSDLAG00005035007 sypa (ENSDLAG00005010429) ENSDLAG00005024640 ENSDLAG00005031629 cxxc1a (ENSDLAG00005031159) ENSDLAG00005028920 ENSDLAG00005030977 ENSDLAG00005034191 ENSDLAG00005028443 ENSDLAG00005031463 ENSDLAG00005004067 ENSDLAG00005033657 ENSDLAG00005004085 Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000175919 Carangaria ANCESTRAL SPECIES 2 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000175919 Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000175919 ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b Seriola ANCESTRAL SPECIES 75 ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000156038.a.b.b.i.a.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT00940000154856.A.b.e.a ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 Yellowtail amberjack MODERN SPECIES 3111 slc6a8 (ENSSLDG00000005570) slc35a2 (ENSSLDG00000005522) pim2 (ENSSLDG00000005510) otud5a (ENSSLDG00000005466) ENSSLDG00000005099 ENSSLDG00000005013 ENSSLDG00000004991 uxt (ENSSLDG00000004893) cdk20 (ENSSLDG00000004867) #22 ENSSLDG00000004845 ENSSLDG00000004824 ENSSLDG00000004775 ENSSLDG00000004725 Greater amberjack MODERN SPECIES 150 ENSSDUG00000000506 st14b (ENSSDUG00000000492) kcnd1 (ENSSDUG00000000452) gripap1 (ENSSDUG00000000417) ptpn18 (ENSSDUG00000000337) plxna3 (ENSSDUG00000000178) bcap31 (ENSSDUG00000000122) slc6a8 (ENSSDUG00000020817) slc35a2 (ENSSDUG00000020792) pim2 (ENSSDUG00000020782) otud5a (ENSSDUG00000020736) ENSSDUG00000020584 ENSSDUG00000020547 ENSSDUG00000020521 uxt (ENSSDUG00000020504) cdk20 (ENSSDUG00000020480) #22 ENSSDUG00000020469 ENSSDUG00000020447 cacna1fb (ENSSDUG00000020229) ENSSDUG00000020093 sypa (ENSSDUG00000020071) ENSSDUG00000020058 ENSSDUG00000019982 cxxc1a (ENSSDUG00000019959) ENSSDUG00000019955 TFE3 (ENSSDUG00000019935) FGD1 (ENSSDUG00000019849) ENSSDUG00000019824 mecp2 (ENSSDUG00000019809) ENSSDUG00000019781 ENSSDUG00000019763 Barramundi perch MODERN SPECIES 348 cdk20 (ENSLCAG00010026198) #22 ENSLCAG00010026193 ENSLCAG00010026189 ENSLCAG00010026184 uxt (ENSLCAG00010026178) ENSLCAG00010026173 ENSLCAG00010026170 otud5a (ENSLCAG00010026168) pim2 (ENSLCAG00010026164) slc35a2 (ENSLCAG00010026161) slc6a8 (ENSLCAG00010026159) bcap31 (ENSLCAG00010026156) plxna3 (ENSLCAG00010025735) ptpn18 (ENSLCAG00010025292) gripap1 (ENSLCAG00010025269) kcnd1 (ENSLCAG00010025256) Pleuronectoidei ANCESTRAL SPECIES 24 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000166313.b ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000181187 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000175919 Tongue sole MODERN SPECIES 1 capza1b (ENSCSEG00000018213) KCNA10 (ENSCSEG00000018205) ENSCSEG00000018186 LGR6 (ENSCSEG00000018163) st14b (ENSCSEG00000018148) kcnd1 (ENSCSEG00000018138) gripap1 (ENSCSEG00000018111) plxna3 (ENSCSEG00000018064) bcap31 (ENSCSEG00000018042) ENSCSEG00000017993 slc6a8 (ENSCSEG00000017972) slc35a2 (ENSCSEG00000017956) ENSCSEG00000017939 ENSCSEG00000017931 uxt (ENSCSEG00000017921) cdk20 (ENSCSEG00000017909) #22 ENSCSEG00000017899 ENSCSEG00000017884 cacna1fb (ENSCSEG00000017631) sypa (ENSCSEG00000017580) ENSCSEG00000017474 HDAC6 (ENSCSEG00000017407) CXXC1 (ENSCSEG00000017380) ENSCSEG00000017371 ENSCSEG00000017362 FGD1 (ENSCSEG00000017343) ENSCSEG00000017332 ENSCSEG00000017325 ENSCSEG00000017284 ENSCSEG00000017270 ENSCSEG00000017213 Turbot MODERN SPECIES 2 ENSSMAG00000015087 ENSSMAG00000015062 ENSSMAG00000015050 kcnd1 (ENSSMAG00000015015) gripap1 (ENSSMAG00000014832) ptpn18 (ENSSMAG00000014799) plxna3 (ENSSMAG00000014612) ENSSMAG00000014595 ENSSMAG00000014523 slc35a2 (ENSSMAG00000014490) pim2 (ENSSMAG00000014470) otud5a (ENSSMAG00000014429) ENSSMAG00000014411 ENSSMAG00000014381 uxt (ENSSMAG00000014363) ENSSMAG00000014343 #22 ENSSMAG00000035771 ENSSMAG00000014100 sypa (ENSSMAG00000014062) ENSSMAG00000014007 ENSSMAG00000013987 ENSSMAG00000013976 ENSSMAG00000027784 ENSSMAG00000026665 ENSSMAG00000030811 ENSSMAG00000013897 ENSSMAG00000013840 ENSSMAG00000034638 ENSSMAG00000013667 WNK2 (ENSSMAG00000013474) ##33 ENSSMAG00000013460 #32 Anabantaria ANCESTRAL SPECIES 3 ENSGT00950000182872.f.a.a.a.a.b ENSGT00550000075050 ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000156315.f ENSGT00940000169444 ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b Zig-zag eel MODERN SPECIES 21 ENSMAMG00000024968 ENSMAMG00000012689 kcnd1 (ENSMAMG00000012654) ENSMAMG00000027067 gripap1 (ENSMAMG00000012610) ptpn18 (ENSMAMG00000012569) plxna3 (ENSMAMG00000012453) ENSMAMG00000012430 ENSMAMG00000012404 slc35a2 (ENSMAMG00000012367) pim2 (ENSMAMG00000012351) otud5a (ENSMAMG00000012329) ENSMAMG00000012314 ENSMAMG00000012258 uxt (ENSMAMG00000012227) ENSMAMG00000012180 #22 ENSMAMG00000012218 ENSMAMG00000012168 ENSMAMG00000012150 ENSMAMG00000012089 sypa (ENSMAMG00000012046) ENSMAMG00000011945 ENSMAMG00000011914 cxxc1a (ENSMAMG00000011895) ENSMAMG00000011870 ENSMAMG00000011838 ENSMAMG00000011823 ENSMAMG00000011807 ENSMAMG00000011796 ENSMAMG00000011744 ENSMAMG00000011723 Anabantoidei ANCESTRAL SPECIES 2 ENSGT00950000182872.f.a.a.a.a.b ENSGT00550000075050 ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a ENSGT01050000244850.A.a.o.a ENSGT00390000011863.c ENSGT00940000155869 ENSGT00950000182827.B ENSGT00940000163427.c ENSGT00940000158963.a ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 #22 ENSGT00940000170958 ENSGT00940000164755.A ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000175919 ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b Siamese fighting fish MODERN SPECIES 18 kcnd1 (ENSBSLG00000019897) gripap1 (ENSBSLG00000019653) ENSBSLG00000019642 ENSBSLG00000019635 plxna3 (ENSBSLG00000019433) bcap31 (ENSBSLG00000019373) slc6a8 (ENSBSLG00000017595) slc35a2 (ENSBSLG00000017421) slc35a2 (ENSBSLG00000017401) ENSBSLG00000017395 pim2 (ENSBSLG00000017383) otud5a (ENSBSLG00000017266) ENSBSLG00000017217 ENSBSLG00000017172 uxt (ENSBSLG00000017147) cdk20 (ENSBSLG00000016954) #22 ENSBSLG00000016928 ENSBSLG00000016917 ENSBSLG00000016683 sypa (ENSBSLG00000013678) ENSBSLG00000013668 ENSBSLG00000013249 ENSBSLG00000012370 FGD1 (ENSBSLG00000012015) ENSBSLG00000011979 mecp2 (ENSBSLG00000011570) ENSBSLG00000011544 abcd1 (ENSBSLG00000010828) ENSBSLG00000010491 Climbing perch MODERN SPECIES 20 ENSATEG00000028896 ENSATEG00000020714 ENSATEG00000020690 kcnd1 (ENSATEG00000020662) gripap1 (ENSATEG00000020553) ptpn18 (ENSATEG00000028292) plxna3 (ENSATEG00000020417) ENSATEG00000026362 ENSATEG00000020314 slc35a2 (ENSATEG00000020284) pim2 (ENSATEG00000020263) otud5a (ENSATEG00000020211) ENSATEG00000020181 ENSATEG00000020141 uxt (ENSATEG00000021229) ENSATEG00000020059 #22 ENSATEG00000020005 ENSATEG00000019956 ENSATEG00000019809 sypa (ENSATEG00000019777) ENSATEG00000019759 ENSATEG00000019652 cxxc1a (ENSATEG00000019631) ENSATEG00000019604 ENSATEG00000019578 ENSATEG00000019560 ENSATEG00000019532 ENSATEG00000019515 ENSATEG00000028169 ENSATEG00000026321 ENSATEG00000019432