Euteleostomi	ANCESTRAL SPECIES	850																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11
Sarcopterygii	ANCESTRAL SPECIES	761																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11
Tetrapoda	ANCESTRAL SPECIES	270																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000168756	ENSGT00390000011180 #8	ENSGT00390000018613.b #7
Amniota	ANCESTRAL SPECIES	67						ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000162301	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000162438	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b
Mammalia	ANCESTRAL SPECIES	51	ENSGT00390000007071 #9	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Theria	ANCESTRAL SPECIES	8	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Primates	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.e #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.e #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.e #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00530000063721.B.i #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37
Bonobo	MODERN SPECIES	2	BANF1 (ENSPPAG00000000682) #7	EIF1AD (ENSPPAG00000002124) #8	SART1 (ENSPPAG00000030167) #9	TSGA10IP (ENSPPAG00000000967) #10	DRAP1 (ENSPPAG00000039355) #11	FOSL1 (ENSPPAG00000030529) #12	FIBP (ENSPPAG00000036485) #13	CTSW (ENSPPAG00000032774) #14	EFEMP2 (ENSPPAG00000028608) #15	MUS81 (ENSPPAG00000024184) #16	ENSPPAG00000041849 #17	SNX32 (ENSPPAG00000042019) #18	OVOL1 (ENSPPAG00000002642) #19	ENSPPAG00000042592 #20	KAT5 (ENSPPAG00000042045) #21	RELA (ENSPPAG00000032472) #22	SIPA1 (ENSPPAG00000011980) #23	PCNX3 (ENSPPAG00000039967) #24	MAP3K11 (ENSPPAG00000028708) #25	KCNK7 (ENSPPAG00000040175) #26	EHBP1L1 (ENSPPAG00000022447) #27	ENSPPAG00000023660 #28	ZNRD2 (ENSPPAG00000035017) #29	LTBP3 (ENSPPAG00000036458) #30	SCYL1 (ENSPPAG00000029818) #31	ENSPPAG00000022234 #32	ENSPPAG00000036161 #33	SLC25A45 (ENSPPAG00000035170) #34	TIGD3 (ENSPPAG00000001675) #35	DPF2 (ENSPPAG00000043218) #36	CDC42EP2 (ENSPPAG00000017994) #37
Chimpanzee	MODERN SPECIES	2	TSGA10IP (ENSPTRG00000043032) #10	DRAP1 (ENSPTRG00000003903) #11	C11H11orf68 (ENSPTRG00000003902)	FOSL1 (ENSPTRG00000003901) #12	CCDC85B (ENSPTRG00000003900)	FIBP (ENSPTRG00000003899) #13	CTSW (ENSPTRG00000003898) #14	EFEMP2 (ENSPTRG00000003897) #15	MUS81 (ENSPTRG00000003896) #16	CFL1 (ENSPTRG00000003895) #17	SNX32 (ENSPTRG00000003894) #18	OVOL1 (ENSPTRG00000003893) #19	AP5B1 (ENSPTRG00000042895)	RNASEH2C (ENSPTRG00000038742) #20	KAT5 (ENSPTRG00000003890) #21	RELA (ENSPTRG00000003889) #22	SIPA1 (ENSPTRG00000034510) #23	PCNX3 (ENSPTRG00000003887) #24	MAP3K11 (ENSPTRG00000003886) #25	KCNK7 (ENSPTRG00000003885) #26	EHBP1L1 (ENSPTRG00000003883) #27	FAM89B (ENSPTRG00000003882)	ZNRD2 (ENSPTRG00000003881) #29	LTBP3 (ENSPTRG00000003880) #30	SCYL1 (ENSPTRG00000003879) #31	ENSPTRG00000049826 #32	ENSPTRG00000044235 #33	SLC25A45 (ENSPTRG00000003874) #34	TIGD3 (ENSPTRG00000003873) #35	DPF2 (ENSPTRG00000003872) #36	CDC42EP2 (ENSPTRG00000051376) #37
Human	MODERN SPECIES	2	TSGA10IP (ENSG00000175513) #10	DRAP1 (ENSG00000175550) #11	C11orf68 (ENSG00000175573)	FOSL1 (ENSG00000175592) #12	CCDC85B (ENSG00000175602)	FIBP (ENSG00000172500) #13	CTSW (ENSG00000172543) #14	EFEMP2 (ENSG00000172638) #15	MUS81 (ENSG00000172732) #16	SNX32 (ENSG00000172803) #18	CFL1 (ENSG00000172757) ##17	OVOL1 (ENSG00000172818) #19	AP5B1 (ENSG00000254470)	RNASEH2C (ENSG00000172922) #20	KAT5 (ENSG00000172977) #21	RELA (ENSG00000173039) #22	SIPA1 (ENSG00000213445) #23	PCNX3 (ENSG00000197136) #24	MAP3K11 (ENSG00000173327) #25	KCNK7 (ENSG00000173338) #26	EHBP1L1 (ENSG00000173442) #27	FAM89B (ENSG00000176973)	ZNRD2 (ENSG00000173465) #29	LTBP3 (ENSG00000168056) #30	SCYL1 (ENSG00000142186) #31	FRMD8 (ENSG00000126391) #33	SLC25A45 (ENSG00000162241) #34	TIGD3 (ENSG00000173825) #35	DPF2 (ENSG00000133884) #36	CDC42EP2 (ENSG00000149798) #37	POLA2 (ENSG00000014138)
Gorilla	MODERN SPECIES	2	SART1 (ENSGGOG00000009457) #9	TSGA10IP (ENSGGOG00000009452) #10	DRAP1 (ENSGGOG00000004797) #11	C11orf68 (ENSGGOG00000004794)	FOSL1 (ENSGGOG00000011411) #12	FIBP (ENSGGOG00000010857) #13	CTSW (ENSGGOG00000010850) #14	EFEMP2 (ENSGGOG00000010836) #15	MUS81 (ENSGGOG00000010816) #16	CFL1 (ENSGGOG00000023183) #17	SNX32 (ENSGGOG00000010801) #18	ENSGGOG00000008101 #19	AP5B1 (ENSGGOG00000038885)	ENSGGOG00000038693	KAT5 (ENSGGOG00000003283) #21	RELA (ENSGGOG00000011810) #22	SIPA1 (ENSGGOG00000011796) #23	PCNX3 (ENSGGOG00000011780) #24	MAP3K11 (ENSGGOG00000011775) #25	KCNK7 (ENSGGOG00000011766) #26	EHBP1L1 (ENSGGOG00000011754) #27	FAM89B (ENSGGOG00000011751)	ZNRD2 (ENSGGOG00000011746) #29	LTBP3 (ENSGGOG00000000714) #30	SCYL1 (ENSGGOG00000000712) #31	ENSGGOG00000025059	FRMD8 (ENSGGOG00000014773) #33	SLC25A45 (ENSGGOG00000014767) #34	TIGD3 (ENSGGOG00000014762) #35	DPF2 (ENSGGOG00000026412) #36	CDC42EP2 (ENSGGOG00000038944) #37
Orangutan	MODERN SPECIES	2	TSGA10IP (ENSPPYG00000030690) #10	DRAP1 (ENSPPYG00000040434) #11	C11orf68 (ENSPPYG00000003040)	FOSL1 (ENSPPYG00000003041) #12	CCDC85B (ENSPPYG00000003042)	FIBP (ENSPPYG00000003043) #13	CTSW (ENSPPYG00000003044) #14	EFEMP2 (ENSPPYG00000003045) #15	MUS81 (ENSPPYG00000003046) #16	CFL1 (ENSPPYG00000003047) ##17	SNX32 (ENSPPYG00000003048) #18	OVOL1 (ENSPPYG00000040158) #19	AP5B1 (ENSPPYG00000029664)	ENSPPYG00000003051 #20	KAT5 (ENSPPYG00000003052) #21	RELA (ENSPPYG00000003053) #22	SIPA1 (ENSPPYG00000003050) #23	PCNX3 (ENSPPYG00000003056) #24	MAP3K11 (ENSPPYG00000003058) #25	KCNK7 (ENSPPYG00000003059) #26	EHBP1L1 (ENSPPYG00000003060) #27	FAM89B (ENSPPYG00000003061)	ZNRD2 (ENSPPYG00000003062) #29	LTBP3 (ENSPPYG00000003063) #30	SCYL1 (ENSPPYG00000003064) #31	ENSPPYG00000030176 #32	ENSPPYG00000003066	FRMD8 (ENSPPYG00000031154) #33	SLC25A45 (ENSPPYG00000003067) #34	TIGD3 (ENSPPYG00000003068) #35	DPF2 (ENSPPYG00000003069) #36
Gibbon	MODERN SPECIES	19	TSGA10IP (ENSNLEG00000005955) #10	ENSNLEG00000005952 #11	C11orf68 (ENSNLEG00000036143)	ENSNLEG00000005945 #12	CCDC85B (ENSNLEG00000033861)	FIBP (ENSNLEG00000005927) #13	CTSW (ENSNLEG00000005919) #14	EFEMP2 (ENSNLEG00000005884) #15	MUS81 (ENSNLEG00000005857) #16	ENSNLEG00000028533 #17	ENSNLEG00000005845 #18	OVOL1 (ENSNLEG00000005840) #19	AP5B1 (ENSNLEG00000031058)	ENSNLEG00000005833 #20	KAT5 (ENSNLEG00000005789) #21	RELA (ENSNLEG00000028853) #22	SIPA1 (ENSNLEG00000005754) #23	PCNX3 (ENSNLEG00000005741) #24	MAP3K11 (ENSNLEG00000005717) #25	ENSNLEG00000005716 #26	EHBP1L1 (ENSNLEG00000005678) #27	ENSNLEG00000005676	ZNRD2 (ENSNLEG00000005669) #29	ENSNLEG00000005644 #30	SCYL1 (ENSNLEG00000005603) #31	ENSNLEG00000033509 #32	ENSNLEG00000005598 #33	SLC25A45 (ENSNLEG00000005596) #34	DPF2 (ENSNLEG00000005574) #36	CDC42EP2 (ENSNLEG00000034698) #37	POLA2 (ENSNLEG00000005558)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.l.a ##36	ENSGT00940000161776 #37	ENSGT00390000016784
Rhesus	MODERN SPECIES	5	C14H11orf68 (ENSMMUG00000008654)	FOSL1 (ENSMMUG00000008653) #12	CCDC85B (ENSMMUG00000008652)	FIBP (ENSMMUG00000008651) #13	CTSW (ENSMMUG00000008649) #14	EFEMP2 (ENSMMUG00000019012) #15	MUS81 (ENSMMUG00000019014) #16	CFL1 (ENSMMUG00000019016) ##17	SNX32 (ENSMMUG00000019017) #18	ENSMMUG00000065052	OVOL1 (ENSMMUG00000012585) #19	AP5B1 (ENSMMUG00000038363)	RNASEH2C (ENSMMUG00000019837) #20	KAT5 (ENSMMUG00000019839) #21	ENSMMUG00000061174	RELA (ENSMMUG00000007418) #22	SIPA1 (ENSMMUG00000007416) #23	PCNX3 (ENSMMUG00000007406) #24	MAP3K11 (ENSMMUG00000050788) #25	KCNK7 (ENSMMUG00000007402) #26	EHBP1L1 (ENSMMUG00000014169) #27	FAM89B (ENSMMUG00000031183)	ZNRD2 (ENSMMUG00000064510) #29	LTBP3 (ENSMMUG00000023479) #30	ENSMMUG00000023477 #31	ENSMMUG00000052424	FRMD8 (ENSMMUG00000023300) #33	SLC25A45 (ENSMMUG00000023297) #34	ENSMMUG00000056343	POLA2 (ENSMMUG00000022031)	ENSMMUG00000047808
Crab-eating macaque	MODERN SPECIES	5	EIF1AD (ENSMFAG00000038170) #8	SART1 (ENSMFAG00000002484) #9	DRAP1 (ENSMFAG00000035458) #11	C11orf68 (ENSMFAG00000035547)	FOSL1 (ENSMFAG00000045562) #12	FIBP (ENSMFAG00000046229) #13	CTSW (ENSMFAG00000002290) #14	EFEMP2 (ENSMFAG00000033077) #15	MUS81 (ENSMFAG00000035399) #16	ENSMFAG00000041919 ##17	SNX32 (ENSMFAG00000003675) #18	OVOL1 (ENSMFAG00000056656) #19	AP5B1 (ENSMFAG00000031665)	RNASEH2C (ENSMFAG00000038096) #20	KAT5 (ENSMFAG00000001136) #21	RELA (ENSMFAG00000033297) #22	PCNX3 (ENSMFAG00000044368) #24	MAP3K11 (ENSMFAG00000000415) #25	KCNK7 (ENSMFAG00000000661) #26	FAM89B (ENSMFAG00000062467)	ZNRD2 (ENSMFAG00000042498) #29	LTBP3 (ENSMFAG00000003349) #30	SCYL1 (ENSMFAG00000030370) #31	SLC25A45 (ENSMFAG00000045518) #34	TIGD3 (ENSMFAG00000023252) #35	ENSMFAG00000000560 ##36	CDC42EP2 (ENSMFAG00000025261) #37	POLA2 (ENSMFAG00000031551)	ENSMFAG00000037725	ENSMFAG00000043469	ENSMFAG00000052237
Pig-tailed macaque	MODERN SPECIES	433	TSGA10IP (ENSMNEG00000044877) #10	DRAP1 (ENSMNEG00000030818) #11	C11orf68 (ENSMNEG00000008372)	FOSL1 (ENSMNEG00000043501) #12	CCDC85B (ENSMNEG00000002474)	FIBP (ENSMNEG00000038481) #13	CTSW (ENSMNEG00000031050) #14	EFEMP2 (ENSMNEG00000042669) #15	MUS81 (ENSMNEG00000033090) #16	ENSMNEG00000033727 ##17	SNX32 (ENSMNEG00000041390) #18	OVOL1 (ENSMNEG00000030480) #19	AP5B1 (ENSMNEG00000003347)	RNASEH2C (ENSMNEG00000040939) #20	KAT5 (ENSMNEG00000035393) #21	RELA (ENSMNEG00000037535) #22	SIPA1 (ENSMNEG00000032636) #23	PCNX3 (ENSMNEG00000000323) #24	MAP3K11 (ENSMNEG00000040258) #25	KCNK7 (ENSMNEG00000032958) #26	EHBP1L1 (ENSMNEG00000043972) #27	FAM89B (ENSMNEG00000041859)	ZNRD2 (ENSMNEG00000031840) #29	LTBP3 (ENSMNEG00000041936) #30	SCYL1 (ENSMNEG00000033206) #31	FRMD8 (ENSMNEG00000025492) #33	SLC25A45 (ENSMNEG00000042519) #34	TIGD3 (ENSMNEG00000028001) #35	DPF2 (ENSMNEG00000032739) #36	CDC42EP2 (ENSMNEG00000027145) #37	POLA2 (ENSMNEG00000045371)
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Olive baboon	MODERN SPECIES	3	DRAP1 (ENSPANG00000013679) #11	C11orf68 (ENSPANG00000043297)	FOSL1 (ENSPANG00000016424) #12	CCDC85B (ENSPANG00000003185)	FIBP (ENSPANG00000016131) #13	CTSW (ENSPANG00000013728) #14	EFEMP2 (ENSPANG00000001161) #15	MUS81 (ENSPANG00000001162) #16	ENSPANG00000023333 ##17	SNX32 (ENSPANG00000025890) #18	OVOL1 (ENSPANG00000002371) #19	AP5B1 (ENSPANG00000005284)	RNASEH2C (ENSPANG00000015965) #20	KAT5 (ENSPANG00000021813) #21	ENSPANG00000013663	RELA (ENSPANG00000013650) #22	SIPA1 (ENSPANG00000012185) #23	PCNX3 (ENSPANG00000023501) #24	MAP3K11 (ENSPANG00000006544) #25	KCNK7 (ENSPANG00000031772) #26	FAM89B (ENSPANG00000031618)	ZNRD2 (ENSPANG00000013678) #29	LTBP3 (ENSPANG00000007731) #30	SCYL1 (ENSPANG00000011369) #31	FRMD8 (ENSPANG00000013649) #33	SLC25A45 (ENSPANG00000004415) #34	TIGD3 (ENSPANG00000006957) #35	DPF2 (ENSPANG00000004688) #36	CDC42EP2 (ENSPANG00000019253) #37	POLA2 (ENSPANG00000023360)	CAPN1 (ENSPANG00000019841)
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166883	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Sooty mangabey	MODERN SPECIES	518	TSGA10IP (ENSCATG00000040631) #10	DRAP1 (ENSCATG00000037518) #11	C11orf68 (ENSCATG00000032767)	FOSL1 (ENSCATG00000033991) #12	CCDC85B (ENSCATG00000002432)	FIBP (ENSCATG00000038299) #13	CTSW (ENSCATG00000037772) #14	EFEMP2 (ENSCATG00000038612) #15	MUS81 (ENSCATG00000038393) #16	ENSCATG00000034589 ##17	SNX32 (ENSCATG00000038436) #18	OVOL1 (ENSCATG00000015233) #19	AP5B1 (ENSCATG00000038336)	ENSCATG00000041043	KAT5 (ENSCATG00000038421) #21	RELA (ENSCATG00000040914) #22	SIPA1 (ENSCATG00000041235) #23	PCNX3 (ENSCATG00000016599) #24	MAP3K11 (ENSCATG00000041504) #25	EHBP1L1 (ENSCATG00000033599) #27	KCNK7 (ENSCATG00000038713) #26	FAM89B (ENSCATG00000038874)	ZNRD2 (ENSCATG00000037496) #29	LTBP3 (ENSCATG00000031334) #30	SCYL1 (ENSCATG00000042824) #31	FRMD8 (ENSCATG00000041016) #33	SLC25A45 (ENSCATG00000008120) #34	TIGD3 (ENSCATG00000005263) #35	DPF2 (ENSCATG00000044255) #36	CDC42EP2 (ENSCATG00000005485) #37	POLA2 (ENSCATG00000017351)
Drill	MODERN SPECIES	1450	SART1 (ENSMLEG00000036259) #9	TSGA10IP (ENSMLEG00000029912) #10	DRAP1 (ENSMLEG00000039943) #11	C11orf68 (ENSMLEG00000032046)	FOSL1 (ENSMLEG00000030221) #12	FIBP (ENSMLEG00000027761) #13	CTSW (ENSMLEG00000040387) #14	EFEMP2 (ENSMLEG00000028906) #15	MUS81 (ENSMLEG00000032706) #16	ENSMLEG00000001954 ##17	SNX32 (ENSMLEG00000039564) #18	OVOL1 (ENSMLEG00000037628) #19	AP5B1 (ENSMLEG00000038856)	ENSMLEG00000040748	KAT5 (ENSMLEG00000035009) #21	RELA (ENSMLEG00000041880) #22	SIPA1 (ENSMLEG00000029128) #23	PCNX3 (ENSMLEG00000029265) #24	MAP3K11 (ENSMLEG00000039637) #25	KCNK7 (ENSMLEG00000038998) #26	EHBP1L1 (ENSMLEG00000035657) #27	ZNRD2 (ENSMLEG00000042150) #29	LTBP3 (ENSMLEG00000009428) #30	SCYL1 (ENSMLEG00000029164) #31
Vervet Monkey	MODERN SPECIES		BANF1 (ENSCSAG00000008086) #7	EIF1AD (ENSCSAG00000008082) #8	SART1 (ENSCSAG00000008081) #9	TSGA10IP (ENSCSAG00000008070) #10	DRAP1 (ENSCSAG00000008063) #11	C11orf68 (ENSCSAG00000008060)	FOSL1 (ENSCSAG00000008055) #12	CCDC85B (ENSCSAG00000019170)	CTSW (ENSCSAG00000008041) #14	EFEMP2 (ENSCSAG00000008035) #15	SNX32 (ENSCSAG00000008022) #18	OVOL1 (ENSCSAG00000007998) #19	AP5B1 (ENSCSAG00000007994)	RNASEH2C (ENSCSAG00000007985) #20	KAT5 (ENSCSAG00000007991) #21	RELA (ENSCSAG00000007981) #22	SIPA1 (ENSCSAG00000007975) #23	PCNX3 (ENSCSAG00000007965) #24	MAP3K11 (ENSCSAG00000007943) #25	KCNK7 (ENSCSAG00000007923) #26	EHBP1L1 (ENSCSAG00000007894) #27	ZNRD2 (ENSCSAG00000007848) #29	FAM89B (ENSCSAG00000007846)	LTBP3 (ENSCSAG00000007833) #30	SCYL1 (ENSCSAG00000007822) #31	FRMD8 (ENSCSAG00000007801) #33	SLC25A45 (ENSCSAG00000007775) #34	TIGD3 (ENSCSAG00000019171) #35	DPF2 (ENSCSAG00000007767) #36	CDC42EP2 (ENSCSAG00000019172) #37	POLA2 (ENSCSAG00000007755)
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285.t #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.k.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Golden snub-nosed monkey	MODERN SPECIES	1279	SART1 (ENSRROG00000045251) #9	TSGA10IP (ENSRROG00000041191) #10	DRAP1 (ENSRROG00000032670) #11	FOSL1 (ENSRROG00000044669) #12	CCDC85B (ENSRROG00000005411)	FIBP (ENSRROG00000028050) #13	CTSW (ENSRROG00000032493) #14	EFEMP2 (ENSRROG00000033390) #15	MUS81 (ENSRROG00000042460) #16	ENSRROG00000038488 ##17	SNX32 (ENSRROG00000033072) #18	OVOL1 (ENSRROG00000028499) #19	AP5B1 (ENSRROG00000040382)	RNASEH2C (ENSRROG00000044910) #20	KAT5 (ENSRROG00000042827) #21	RELA (ENSRROG00000017038) #22	SIPA1 (ENSRROG00000012873) #23	PCNX3 (ENSRROG00000031554) #24	MAP3K11 (ENSRROG00000032921) #25
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	122	UNCX (ENSRBIG00000011288)	ZFAND2A (ENSRBIG00000036939)	GPER1 (ENSRBIG00000031501)	GPR146 (ENSRBIG00000021137)	C7orf50 (ENSRBIG00000033961)	CYP2W1 (ENSRBIG00000034894)	ENSRBIG00000030507	ADAP1 (ENSRBIG00000044264)	GET4 (ENSRBIG00000044198)	SUN1 (ENSRBIG00000044381)	DNAAF5 (ENSRBIG00000044063)	PRKAR1B (ENSRBIG00000041994)	ENSRBIG00000037342	FOXL3 (ENSRBIG00000032566)	FAM20C (ENSRBIG00000035784)	ENSRBIG00000033054 #22	SIPA1 (ENSRBIG00000032146) #23	PCNX3 (ENSRBIG00000036963) #24	MAP3K11 (ENSRBIG00000041610) #25	KCNK7 (ENSRBIG00000040976) #26	EHBP1L1 (ENSRBIG00000039959) #27	FAM89B (ENSRBIG00000043172)	ZNRD2 (ENSRBIG00000043804) #29	LTBP3 (ENSRBIG00000036009) #30	SCYL1 (ENSRBIG00000042570) #31	FRMD8 (ENSRBIG00000039260) #33	SLC25A45 (ENSRBIG00000031082) #34	TIGD3 (ENSRBIG00000030267) #35	DPF2 (ENSRBIG00000027097) #36	CDC42EP2 (ENSRBIG00000008285) #37	POLA2 (ENSRBIG00000044307)
Black snub-nosed monkey	MODERN SPECIES	2873																ENSRBIG00000042764 #22
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.c #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Cebidae	ANCESTRAL SPECIES		ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.c #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Marmoset	MODERN SPECIES	2	DRAP1 (ENSCJAG00000040572) #11	C11orf68 (ENSCJAG00000084275)	ENSCJAG00000075814	FOSL1 (ENSCJAG00000001776) #12	CCDC85B (ENSCJAG00000001793)	FIBP (ENSCJAG00000046377) #13	CTSW (ENSCJAG00000001836) #14	MUS81 (ENSCJAG00000001894) #16	EFEMP2 (ENSCJAG00000001847) #15	SNX32 (ENSCJAG00000001930) #18	OVOL1 (ENSCJAG00000001957) #19	AP5B1 (ENSCJAG00000045485)	RNASEH2C (ENSCJAG00000001965) #20	KAT5 (ENSCJAG00000001971) #21	ENSCJAG00000034904	RELA (ENSCJAG00000002037) #22	SIPA1 (ENSCJAG00000002062) #23	PCNX3 (ENSCJAG00000002115) #24	MAP3K11 (ENSCJAG00000002128) #25	EHBP1L1 (ENSCJAG00000002150) #27	FAM89B (ENSCJAG00000041490)	ZNRD2 (ENSCJAG00000002186) #29	LTBP3 (ENSCJAG00000002190) #30	SCYL1 (ENSCJAG00000002235) #31	ENSCJAG00000047435 #32	FRMD8 (ENSCJAG00000002274) #33	SLC25A45 (ENSCJAG00000002286) #34	TIGD3 (ENSCJAG00000022193) #35	DPF2 (ENSCJAG00000002301) #36	CDC42EP2 (ENSCJAG00000047069) #37	POLA2 (ENSCJAG00000002330)
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815.c #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Capuchin	MODERN SPECIES	102	DRAP1 (ENSCCAG00000037779) #11	C11orf68 (ENSCCAG00000014309)	FOSL1 (ENSCCAG00000028907) #12	CCDC85B (ENSCCAG00000006756)	FIBP (ENSCCAG00000026244) #13	CTSW (ENSCCAG00000035765) #14	EFEMP2 (ENSCCAG00000020038) #15	MUS81 (ENSCCAG00000020953) #16	CFL1 (ENSCCAG00000025381) ##17	SNX32 (ENSCCAG00000025403) #18	OVOL1 (ENSCCAG00000021442) #19	AP5B1 (ENSCCAG00000016243)	RNASEH2C (ENSCCAG00000025461) #20	KAT5 (ENSCCAG00000033565) #21	ENSCCAG00000019259 ##17	RELA (ENSCCAG00000021994) #22	SIPA1 (ENSCCAG00000033950) #23	PCNX3 (ENSCCAG00000017720) #24	MAP3K11 (ENSCCAG00000027480) #25	KCNK7 (ENSCCAG00000027752) #26	EHBP1L1 (ENSCCAG00000035449) #27	ZNRD2 (ENSCCAG00000033444) #29	FAM89B (ENSCCAG00000031339)	LTBP3 (ENSCCAG00000029957) #30	SCYL1 (ENSCCAG00000026696) #31	FRMD8 (ENSCCAG00000030895) #33	SLC25A45 (ENSCCAG00000024904) #34	DPF2 (ENSCCAG00000029873) #36	CDC42EP2 (ENSCCAG00000002562) #37	POLA2 (ENSCCAG00000023961)	ENSCCAG00000037945
Bolivian squirrel monkey	MODERN SPECIES	136	TSGA10IP (ENSSBOG00000032087) #10	DRAP1 (ENSSBOG00000012455) #11	C11orf68 (ENSSBOG00000034720)	FOSL1 (ENSSBOG00000034165) #12	CCDC85B (ENSSBOG00000023803)	FIBP (ENSSBOG00000035872) #13	CTSW (ENSSBOG00000018563) #14	EFEMP2 (ENSSBOG00000031069) #15	MUS81 (ENSSBOG00000028819) #16	ENSSBOG00000026277 ##17	SNX32 (ENSSBOG00000034591) #18	OVOL1 (ENSSBOG00000030430) #19	AP5B1 (ENSSBOG00000033418)	RNASEH2C (ENSSBOG00000034781) #20	KAT5 (ENSSBOG00000020725) #21	RELA (ENSSBOG00000035520) #22	SIPA1 (ENSSBOG00000028047) #23	PCNX3 (ENSSBOG00000020063) #24	MAP3K11 (ENSSBOG00000031054) #25	KCNK7 (ENSSBOG00000031815) #26	EHBP1L1 (ENSSBOG00000023194) #27	FAM89B (ENSSBOG00000034796)	ZNRD2 (ENSSBOG00000031986) #29	LTBP3 (ENSSBOG00000002107) #30	SCYL1 (ENSSBOG00000035193) #31	ENSSBOG00000034221	FRMD8 (ENSSBOG00000018699) #33	SLC25A45 (ENSSBOG00000010340) #34	TIGD3 (ENSSBOG00000019092) #35	DPF2 (ENSSBOG00000029354) #36	CDC42EP2 (ENSSBOG00000013950) #37
Mas night monkey	MODERN SPECIES	660	C11orf68 (ENSANAG00000031627)	FOSL1 (ENSANAG00000018096) #12	CCDC85B (ENSANAG00000020091)	ENSANAG00000029489 #13	CTSW (ENSANAG00000037531) #14	EFEMP2 (ENSANAG00000036221) #15	MUS81 (ENSANAG00000013318) #16	ENSANAG00000029591 ##17	SNX32 (ENSANAG00000026038) #18	OVOL1 (ENSANAG00000031181) #19	AP5B1 (ENSANAG00000030089)	RNASEH2C (ENSANAG00000032535) #20	KAT5 (ENSANAG00000035412) #21	ENSANAG00000032057	ENSANAG00000035633	RELA (ENSANAG00000035759) #22	SIPA1 (ENSANAG00000033102) #23	PCNX3 (ENSANAG00000026559) #24	MAP3K11 (ENSANAG00000021424) #25	KCNK7 (ENSANAG00000035465) #26	EHBP1L1 (ENSANAG00000035647) #27	FAM89B (ENSANAG00000023381)	ZNRD2 (ENSANAG00000021004) #29	LTBP3 (ENSANAG00000029708) #30	SCYL1 (ENSANAG00000030201) #31	FRMD8 (ENSANAG00000031431) #33	SLC25A45 (ENSANAG00000036801) #34	DPF2 (ENSANAG00000035150) #36	CDC42EP2 (ENSANAG00000020118) #37	POLA2 (ENSANAG00000030656)	ENSANAG00000021772
Tarsier	MODERN SPECIES	2476																RELA (ENSTSYG00000031688) #22
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Bushbaby	MODERN SPECIES	255	TSGA10IP (ENSOGAG00000016520) #10	DRAP1 (ENSOGAG00000016519) #11	C11orf68 (ENSOGAG00000031892)	FOSL1 (ENSOGAG00000016518) #12	CCDC85B (ENSOGAG00000028471)	FIBP (ENSOGAG00000016515) #13	CTSW (ENSOGAG00000016512) #14	EFEMP2 (ENSOGAG00000016509) #15	ENSOGAG00000016505 #16	ENSOGAG00000016503 ##17	SNX32 (ENSOGAG00000016499) #18	OVOL1 (ENSOGAG00000016496) #19	AP5B1 (ENSOGAG00000027376)	RNASEH2C (ENSOGAG00000014128) #20	KAT5 (ENSOGAG00000014123) #21	RELA (ENSOGAG00000014117) #22	SIPA1 (ENSOGAG00000034419) #23	PCNX3 (ENSOGAG00000014112) #24	MAP3K11 (ENSOGAG00000014085) #25	KCNK7 (ENSOGAG00000014083) #26	EHBP1L1 (ENSOGAG00000014072) #27	FAM89B (ENSOGAG00000024711)	ZNRD2 (ENSOGAG00000014068) #29	LTBP3 (ENSOGAG00000030508) #30	SCYL1 (ENSOGAG00000015064) #31	FRMD8 (ENSOGAG00000014706) #33	SLC25A45 (ENSOGAG00000014703) #34	TIGD3 (ENSOGAG00000027212) #35	DPF2 (ENSOGAG00000014697) #36	CDC42EP2 (ENSOGAG00000032378) #37	POLA2 (ENSOGAG00000014687)
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Mouse lemur	MODERN SPECIES	27	TSGA10IP (ENSMICG00000038933) #10	DRAP1 (ENSMICG00000032164) #11	C11orf68 (ENSMICG00000012852)	FOSL1 (ENSMICG00000012846) #12	CCDC85B (ENSMICG00000006912)	FIBP (ENSMICG00000043326) #13	CTSW (ENSMICG00000029293) #14	EFEMP2 (ENSMICG00000012803) #15	MUS81 (ENSMICG00000012783) #16	ENSMICG00000012763 ##17	SNX32 (ENSMICG00000012748) #18	OVOL1 (ENSMICG00000032602) #19	AP5B1 (ENSMICG00000032450)	RNASEH2C (ENSMICG00000008882) #20	KAT5 (ENSMICG00000008880) #21	RELA (ENSMICG00000008872) #22	SIPA1 (ENSMICG00000031014) #23	PCNX3 (ENSMICG00000008858) #24	MAP3K11 (ENSMICG00000046309) #25	KCNK7 (ENSMICG00000008803) #26	EHBP1L1 (ENSMICG00000030542) #27	FAM89B (ENSMICG00000026596)	ZNRD2 (ENSMICG00000008771) #29	LTBP3 (ENSMICG00000008721) #30	SCYL1 (ENSMICG00000003114) #31	FRMD8 (ENSMICG00000008701) #33	SLC25A45 (ENSMICG00000008693) #34	DPF2 (ENSMICG00000008672) #36	POLA2 (ENSMICG00000008635)	ENSMICG00000008625	CAPN1 (ENSMICG00000008602)
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Coquerels sifaka	MODERN SPECIES	124	TSGA10IP (ENSPCOG00000016636) #10	DRAP1 (ENSPCOG00000018977) #11	C11orf68 (ENSPCOG00000003847)	FOSL1 (ENSPCOG00000027454) #12	CCDC85B (ENSPCOG00000002873)	FIBP (ENSPCOG00000018954) #13	CTSW (ENSPCOG00000015846) #14	EFEMP2 (ENSPCOG00000023038) #15	MUS81 (ENSPCOG00000018575) #16	ENSPCOG00000021997 ##17	SNX32 (ENSPCOG00000020633) #18	OVOL1 (ENSPCOG00000027714) #19	AP5B1 (ENSPCOG00000018818)	RNASEH2C (ENSPCOG00000021092) #20	KAT5 (ENSPCOG00000028886) #21	RELA (ENSPCOG00000028887) #22	SIPA1 (ENSPCOG00000021667) #23	PCNX3 (ENSPCOG00000027256) #24	MAP3K11 (ENSPCOG00000027348) #25	KCNK7 (ENSPCOG00000023392) #26	EHBP1L1 (ENSPCOG00000022137) #27	FAM89B (ENSPCOG00000026432)	ZNRD2 (ENSPCOG00000026607) #29	LTBP3 (ENSPCOG00000021384) #30	SCYL1 (ENSPCOG00000017867) #31	ENSPCOG00000027075	FRMD8 (ENSPCOG00000027894) #33	SLC25A45 (ENSPCOG00000012217) #34	DPF2 (ENSPCOG00000027002) #36	POLA2 (ENSPCOG00000019633)	ENSPCOG00000018087
Greater bamboo lemur	MODERN SPECIES	592	TSGA10IP (ENSPSMG00000022612) #10	DRAP1 (ENSPSMG00000022641) #11	C11orf68 (ENSPSMG00000022659)	FOSL1 (ENSPSMG00000022678) #12	CCDC85B (ENSPSMG00000022682)	FIBP (ENSPSMG00000022703) #13	CTSW (ENSPSMG00000022712) #14	EFEMP2 (ENSPSMG00000022755) #15	MUS81 (ENSPSMG00000022842) #16	ENSPSMG00000022919 ##17	SNX32 (ENSPSMG00000022947) #18	OVOL1 (ENSPSMG00000022956) #19	AP5B1 (ENSPSMG00000022959)	RNASEH2C (ENSPSMG00000022963) #20	KAT5 (ENSPSMG00000023031) #21	RELA (ENSPSMG00000023154) #22	SIPA1 (ENSPSMG00000023207) #23	PCNX3 (ENSPSMG00000023251) #24	MAP3K11 (ENSPSMG00000023264) #25	KCNK7 (ENSPSMG00000023274) #26	EHBP1L1 (ENSPSMG00000023279) #27	FAM89B (ENSPSMG00000023284)	ZNRD2 (ENSPSMG00000023296) #29	LTBP3 (ENSPSMG00000023366) #30	SCYL1 (ENSPSMG00000023508) #31	ENSPSMG00000023581	FRMD8 (ENSPSMG00000023608) #33	SLC25A45 (ENSPSMG00000023627) #34	TIGD3 (ENSPSMG00000023634) #35	DPF2 (ENSPSMG00000000228) #36	CDC42EP2 (ENSPSMG00000000263) #37
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Tree shrew	MODERN SPECIES	2058																RELA (ENSTBEG00000004751) #22	ENSTBEG00000004009 #24	ENSTBEG00000003464	ENSTBEG00000001399 #24	ENSTBEG00000001286 #26	ENSTBEG00000009360	EHBP1L1 (ENSTBEG00000008314) #27	ZNRD2 (ENSTBEG00000008096) #29	LTBP3 (ENSTBEG00000006176) #30	SCYL1 (ENSTBEG00000004520) #31
Glires	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Lagomorpha	ANCESTRAL SPECIES	333																ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27
Pika	MODERN SPECIES	3497																ENSOPRG00000010827 #22	SIPA1 (ENSOPRG00000018209) #23	ENSOPRG00000010801 #24	ENSOPRG00000010789	ENSOPRG00000010755 #24	ENSOPRG00000019098 #24	MAP3K11 (ENSOPRG00000010736) #25	KCNK7 (ENSOPRG00000010718) #26	ENSOPRG00000010677 #27
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Kangaroo rat	MODERN SPECIES	373	Sart1 (ENSDORG00000011887) #9	ENSDORG00000024665 #10	Drap1 (ENSDORG00000009959) #11	AI837181 (ENSDORG00000025117)	Fosl1 (ENSDORG00000009958) #12	Ccdc85b (ENSDORG00000009956)	Fibp (ENSDORG00000009952) #13	Ctsw (ENSDORG00000009948) #14	Efemp2 (ENSDORG00000009947) #15	Mus81 (ENSDORG00000009944) #16	Cfl1 (ENSDORG00000009943) ##17	Ovol1 (ENSDORG00000028510) #19	Ap5b1 (ENSDORG00000028410)	Rnaseh2c (ENSDORG00000023624) #20	Kat5 (ENSDORG00000012563) #21	ENSDORG00000012560 #22	Sipa1 (ENSDORG00000012555) #23	Pcnx3 (ENSDORG00000012549) #24	Map3k11 (ENSDORG00000012547) #25	Kcnk7 (ENSDORG00000027318) #26	ENSDORG00000012530 #27	Fam89b (ENSDORG00000023192)	Znrd2 (ENSDORG00000025369) #29	Ltbp3 (ENSDORG00000008215) #30	Scyl1 (ENSDORG00000008213) #31	Frmd8 (ENSDORG00000011606) #33	Slc25a45 (ENSDORG00000023675) #34	Tigd3 (ENSDORG00000029849) #35	Dpf2 (ENSDORG00000011600) #36	Cdc42ep2 (ENSDORG00000029525) #37	Pola2 (ENSDORG00000006905)
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Lesser Egyptian jerboa	MODERN SPECIES	60	Drap1 (ENSJJAG00000010690) #11	AI837181 (ENSJJAG00000020360)	Fosl1 (ENSJJAG00000017498) #12	Ccdc85b (ENSJJAG00000011470)	Fibp (ENSJJAG00000021400) #13	Ctsw (ENSJJAG00000001298) #14	Efemp2 (ENSJJAG00000010087) #15	Mus81 (ENSJJAG00000018837) #16	Cfl1 (ENSJJAG00000022449) ##17	Ovol1 (ENSJJAG00000024400) #19	Ap5b1 (ENSJJAG00000016272)	Rnaseh2c (ENSJJAG00000019320) #20	Kat5 (ENSJJAG00000023662) #21	ENSJJAG00000024176	ENSJJAG00000009774	ENSJJAG00000014385 #22	Sipa1 (ENSJJAG00000012103) #23	Pcnx3 (ENSJJAG00000012945) #24	Map3k11 (ENSJJAG00000011801) #25	Kcnk7 (ENSJJAG00000001537) #26	ENSJJAG00000011387 #27	Fam89b (ENSJJAG00000013486)	Znrd2 (ENSJJAG00000016826) #29	Ltbp3 (ENSJJAG00000021720) #30	ENSJJAG00000007333 #31	Frmd8 (ENSJJAG00000024269) #33	Slc25a45 (ENSJJAG00000017178) #34	Tigd3 (ENSJJAG00000011195) #35	Dpf2 (ENSJJAG00000018564) #36	ENSJJAG00000010895 #37	Pola2 (ENSJJAG00000013843)
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Upper Galilee mountains blind mole rat	MODERN SPECIES	1790	Sart1 (ENSNGAG00000004727) #9	Drap1 (ENSNGAG00000001882) #11	AI837181 (ENSNGAG00000001021)	Fosl1 (ENSNGAG00000000833) #12	Ccdc85b (ENSNGAG00000000699)	Fibp (ENSNGAG00000000261) #13	Ctsw (ENSNGAG00000021443) #14	Efemp2 (ENSNGAG00000021231) #15	Mus81 (ENSNGAG00000019320) #16	Cfl1 (ENSNGAG00000003128) ##17	Snx32 (ENSNGAG00000001302) #18	Ovol1 (ENSNGAG00000021127) #19	Ap5b1 (ENSNGAG00000020574)	Rnaseh2c (ENSNGAG00000020391) #20	Kat5 (ENSNGAG00000018671) #21	ENSNGAG00000016960 #22	Sipa1 (ENSNGAG00000001278) #23	Pcnx3 (ENSNGAG00000011574) #24	Map3k11 (ENSNGAG00000005852) #25	Kcnk7 (ENSNGAG00000004993) #26	ENSNGAG00000002065 #27	Fam89b (ENSNGAG00000000889)	Znrd2 (ENSNGAG00000000517) #29	Ltbp3 (ENSNGAG00000018303) #30	Scyl1 (ENSNGAG00000016863) #31	Frmd8 (ENSNGAG00000016218) #33	Slc25a45 (ENSNGAG00000015505) #34	Tigd3 (ENSNGAG00000015391) #35	Dpf2 (ENSNGAG00000014669) #36	Cdc42ep2 (ENSNGAG00000000526) #37	Pola2 (ENSNGAG00000017624)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Murinae	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Mus	ANCESTRAL SPECIES		ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Mus_C	ANCESTRAL SPECIES	25	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Steppe mouse	MODERN SPECIES	3175	Drap1 (ENSMSIG00000003544) #11	AI837181 (ENSMSIG00000003519)	ENSMSIG00000003501	Fosl1 (ENSMSIG00000003475) #12	Ccdc85b (ENSMSIG00000003469)	Fibp (ENSMSIG00000003390) #13	Ctsw (ENSMSIG00000003302) #14	Efemp2 (ENSMSIG00000003166) #15	Mus81 (ENSMSIG00000001721) #16	Cfl1 (ENSMSIG00000001620) ##17	Snx32 (ENSMSIG00000001556) #18	Ovol1 (ENSMSIG00000001525) #19	Ap5b1 (ENSMSIG00000001503)	Rnaseh2c (ENSMSIG00000001454) #20	Kat5 (ENSMSIG00000001364) #21	ENSMSIG00000001288 #22	Sipa1 (ENSMSIG00000001174) #23	Pcnx3 (ENSMSIG00000000821) #24	Map3k11 (ENSMSIG00000000749) #25	Kcnk7 (ENSMSIG00000000729) #26	Ehbp1l1 (ENSMSIG00000000552) #27	Fam89b (ENSMSIG00000000508)	ENSMSIG00000000454 #29	Ltbp3 (ENSMSIG00000000265) #30	Scyl1 (ENSMSIG00000000177) #31	ENSMSIG00000030318	Frmd8 (ENSMSIG00000030316) #33	Slc25a45 (ENSMSIG00000030315) #34	Tigd3 (ENSMSIG00000030313) #35	Dpf2 (ENSMSIG00000030307) #36	Cdc42ep2 (ENSMSIG00000030305) #37
spretus	MODERN SPECIES	10	Drap1 (MGP_SPRETEiJ_G0023461) #11	MGP_SPRETEiJ_G0023462	Fosl1 (MGP_SPRETEiJ_G0023463) #12	Ccdc85b (MGP_SPRETEiJ_G0023464)	Fibp (MGP_SPRETEiJ_G0023465) #13	Ctsw (MGP_SPRETEiJ_G0023466) #14	Efemp2 (MGP_SPRETEiJ_G0023467) #15	Mus81 (MGP_SPRETEiJ_G0023468) #16	MGP_SPRETEiJ_G0023469 ##17	Snx32 (MGP_SPRETEiJ_G0023470) #18	Nscme3l (MGP_SPRETEiJ_G0023471)	Ovol1 (MGP_SPRETEiJ_G0023472) #19	Ap5b1 (MGP_SPRETEiJ_G0023473)	MGP_SPRETEiJ_G0023474	Kat5 (MGP_SPRETEiJ_G0023475) #21	Rela (MGP_SPRETEiJ_G0023476) #22	Sipa1 (MGP_SPRETEiJ_G0023477) #23	Pcnx3 (MGP_SPRETEiJ_G0023478) #24	Map3k11 (MGP_SPRETEiJ_G0023479) #25	Kcnk7 (MGP_SPRETEiJ_G0023480) #26	Ehbp1l1 (MGP_SPRETEiJ_G0023481) #27	Fam89b (MGP_SPRETEiJ_G0023482)	Znrd2 (MGP_SPRETEiJ_G0023483) #29	Ltbp3 (MGP_SPRETEiJ_G0023484) #30	Scyl1 (MGP_SPRETEiJ_G0023485) #31	Frmd8 (MGP_SPRETEiJ_G0023486) #33	Slc25a45 (MGP_SPRETEiJ_G0023487) #34	Tigd3 (MGP_SPRETEiJ_G0023488) #35	Dpf2 (MGP_SPRETEiJ_G0023489) #36	Cdc42ep2 (MGP_SPRETEiJ_G0023490) #37	Pola2 (MGP_SPRETEiJ_G0023491)
Mouse	MODERN SPECIES	10	Drap1 (ENSMUSG00000024914) #11	AI837181 (ENSMUSG00000047423)	Fosl1 (ENSMUSG00000024912) #12	Ccdc85b (ENSMUSG00000095098)	Fibp (ENSMUSG00000024911) #13	Ctsw (ENSMUSG00000024910) #14	Efemp2 (ENSMUSG00000024909) #15	Mus81 (ENSMUSG00000024906) #16	Cfl1 (ENSMUSG00000056201) ##17	Snx32 (ENSMUSG00000056185) #18	Nscme3l (ENSMUSG00000100937)	Ovol1 (ENSMUSG00000024922) #19	Ap5b1 (ENSMUSG00000049562)	Rnaseh2c (ENSMUSG00000024925) #20	Kat5 (ENSMUSG00000024926) #21	Rela (ENSMUSG00000024927) #22	Sipa1 (ENSMUSG00000056917) #23	Pcnx3 (ENSMUSG00000054874) #24	Map3k11 (ENSMUSG00000004054) #25	Kcnk7 (ENSMUSG00000024936) #26	Ehbp1l1 (ENSMUSG00000024937) #27	Fam89b (ENSMUSG00000024939)	Znrd2 (ENSMUSG00000079478) #29	Ltbp3 (ENSMUSG00000024940) #30	Scyl1 (ENSMUSG00000024941) #31	Frmd8 (ENSMUSG00000024816) #33	Slc25a45 (ENSMUSG00000024818) #34	Tigd3 (ENSMUSG00000044390) #35	Dpf2 (ENSMUSG00000024826) #36	Cdc42ep2 (ENSMUSG00000045664) #37	Pola2 (ENSMUSG00000024833)
Ryukyu mouse	MODERN SPECIES	10	Drap1 (MGP_CAROLIEiJ_G0022547) #11	AI837181 (MGP_CAROLIEiJ_G0022548)	Fosl1 (MGP_CAROLIEiJ_G0022549) #12	Ccdc85b (MGP_CAROLIEiJ_G0022550)	Fibp (MGP_CAROLIEiJ_G0022551) #13	Ctsw (MGP_CAROLIEiJ_G0022552) #14	Efemp2 (MGP_CAROLIEiJ_G0022553) #15	Mus81 (MGP_CAROLIEiJ_G0022554) #16	MGP_CAROLIEiJ_G0022555 ##17	Snx32 (MGP_CAROLIEiJ_G0022556) #18	Nscme3l (MGP_CAROLIEiJ_G0022557)	Ovol1 (MGP_CAROLIEiJ_G0022558) #19	Ap5b1 (MGP_CAROLIEiJ_G0022559)	MGP_CAROLIEiJ_G0022560 #20	Kat5 (MGP_CAROLIEiJ_G0022561) #21	Rela (MGP_CAROLIEiJ_G0022562) #22	Sipa1 (MGP_CAROLIEiJ_G0022563) #23	Pcnx3 (MGP_CAROLIEiJ_G0022564) #24	Map3k11 (MGP_CAROLIEiJ_G0022565) #25	Kcnk7 (MGP_CAROLIEiJ_G0022566) #26	Ehbp1l1 (MGP_CAROLIEiJ_G0022567) #27	Fam89b (MGP_CAROLIEiJ_G0022568)	Znrd2 (MGP_CAROLIEiJ_G0022569) #29	Ltbp3 (MGP_CAROLIEiJ_G0022570) #30	Scyl1 (MGP_CAROLIEiJ_G0022571) #31	Frmd8 (MGP_CAROLIEiJ_G0022572) #33	Slc25a45 (MGP_CAROLIEiJ_G0022573) #34	Tigd3 (MGP_CAROLIEiJ_G0022574) #35	Dpf2 (MGP_CAROLIEiJ_G0022575) #36	Cdc42ep2 (MGP_CAROLIEiJ_G0022576) #37	Pola2 (MGP_CAROLIEiJ_G0022577)
Shrew mouse	MODERN SPECIES		Drap1 (MGP_PahariEiJ_G0014044) #11	AI837181 (MGP_PahariEiJ_G0014045)	Fosl1 (MGP_PahariEiJ_G0014046) #12	Ccdc85b (MGP_PahariEiJ_G0014047)	Fibp (MGP_PahariEiJ_G0014048) #13	Ctsw (MGP_PahariEiJ_G0014049) #14	Efemp2 (MGP_PahariEiJ_G0014050) #15	Mus81 (MGP_PahariEiJ_G0014051) #16	MGP_PahariEiJ_G0014052 ##17	Snx32 (MGP_PahariEiJ_G0014053) #18	Nscme3l (MGP_PahariEiJ_G0014054)	Ovol1 (MGP_PahariEiJ_G0014055) #19	Ap5b1 (MGP_PahariEiJ_G0014056)	MGP_PahariEiJ_G0014057 #20	Kat5 (MGP_PahariEiJ_G0014058) #21	Rela (MGP_PahariEiJ_G0014059) #22	Sipa1 (MGP_PahariEiJ_G0014060) #23	Pcnx3 (MGP_PahariEiJ_G0014061) #24	Map3k11 (MGP_PahariEiJ_G0014062) #25	Kcnk7 (MGP_PahariEiJ_G0014063) #26	Ehbp1l1 (MGP_PahariEiJ_G0014064) #27	Fam89b (MGP_PahariEiJ_G0014065)	Znrd2 (MGP_PahariEiJ_G0014066) #29	Ltbp3 (MGP_PahariEiJ_G0014067) #30	Scyl1 (MGP_PahariEiJ_G0014068) #31	Frmd8 (MGP_PahariEiJ_G0014069) #33	Slc25a45 (MGP_PahariEiJ_G0014070) #34	Tigd3 (MGP_PahariEiJ_G0014071) #35	Dpf2 (MGP_PahariEiJ_G0014072) #36	Cdc42ep2 (MGP_PahariEiJ_G0014073) #37	Pola2 (MGP_PahariEiJ_G0014074)
Rat	MODERN SPECIES		Drap1 (ENSRNOG00000020527) #11	Bles03 (ENSRNOG00000020551)	Fosl1 (ENSRNOG00000020552) #12	Ccdc85b (ENSRNOG00000070266)	Fibp (ENSRNOG00000020567) #13	Ctsw (ENSRNOG00000027096) #14	Efemp2 (ENSRNOG00000020587) #15	Cfl1 (ENSRNOG00000020660) ##17	Mus81 (ENSRNOG00000020617) #16	Snx32 (ENSRNOG00000026527) #18	LOC102551929 (ENSRNOG00000055506)	Ovol1 (ENSRNOG00000020669) #19	Ap5b1 (ENSRNOG00000026114)	Rnaseh2c (ENSRNOG00000020700) #20	Kat5 (ENSRNOG00000061012) #21	Rela (ENSRNOG00000030888) #22	Sipa1 (ENSRNOG00000020726) #23	Pcnx3 (ENSRNOG00000020742) #24	Map3k11 (ENSRNOG00000020773) #25	Kcnk7 (ENSRNOG00000020784) #26	Ehbp1l1 (ENSRNOG00000056038) #27	Fam89b (ENSRNOG00000024239)	Znrd2 (ENSRNOG00000012736) #29	Ltbp3 (ENSRNOG00000020813) #30	Scyl1 (ENSRNOG00000023668) #31	Frmd8 (ENSRNOG00000020881) #33	Slc25a45 (ENSRNOG00000030616) #34	Tigd3 (ENSRNOG00000023318) #35	Dpf2 (ENSRNOG00000020892) #36	Cdc42ep2 (ENSRNOG00000020904) #37	Pola2 (ENSRNOG00000020906)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735.j #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.g.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000163627.d.b	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735.j #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.g.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Prairie vole	MODERN SPECIES	16	Drap1 (ENSMOCG00000002217) #11	AI837181 (ENSMOCG00000019637)	Fosl1 (ENSMOCG00000006656) #12	Ccdc85b (ENSMOCG00000002539)	Fibp (ENSMOCG00000002306) #13	Ctsw (ENSMOCG00000011527) #14	Efemp2 (ENSMOCG00000017409) #15	Mus81 (ENSMOCG00000019125) #16	ENSMOCG00000001535 ##17	Snx32 (ENSMOCG00000007593) #18	ENSMOCG00000001277	Ovol1 (ENSMOCG00000016507) #19	Ap5b1 (ENSMOCG00000011642)	Rnaseh2c (ENSMOCG00000013231) #20	Kat5 (ENSMOCG00000009162) #21	Rela (ENSMOCG00000020455) #22	Sipa1 (ENSMOCG00000017546) #23	Pcnx3 (ENSMOCG00000011652) #24	Map3k11 (ENSMOCG00000007193) #25	Kcnk7 (ENSMOCG00000016184) #26	ENSMOCG00000017488 #27	Fam89b (ENSMOCG00000022130)	Znrd2 (ENSMOCG00000001510) #29	Ltbp3 (ENSMOCG00000022312) #30	Scyl1 (ENSMOCG00000012901) #31	Frmd8 (ENSMOCG00000016492) #33	Slc25a45 (ENSMOCG00000002439) #34	Tigd3 (ENSMOCG00000010179) #35	Dpf2 (ENSMOCG00000021188) #36	Cdc42ep2 (ENSMOCG00000021194) #37	Pola2 (ENSMOCG00000013295)
Northern American deer mouse	MODERN SPECIES		Drap1 (ENSPEMG00000019198) #11	AI837181 (ENSPEMG00000024331)	Fosl1 (ENSPEMG00000009952) #12	Ccdc85b (ENSPEMG00000007267)	Fibp (ENSPEMG00000001666) #13	Ctsw (ENSPEMG00000016317) #14	Efemp2 (ENSPEMG00000009034) #15	Mus81 (ENSPEMG00000006420) #16	Cfl1 (ENSPEMG00000023358) ##17	Snx32 (ENSPEMG00000012232) #18	Nscme3l (ENSPEMG00000010712)	Ovol1 (ENSPEMG00000018296) #19	Ap5b1 (ENSPEMG00000018685)	Rnaseh2c (ENSPEMG00000018577) #20	Kat5 (ENSPEMG00000015147) #21	Rela (ENSPEMG00000015132) #22	Sipa1 (ENSPEMG00000019252) #23	Pcnx3 (ENSPEMG00000007136) #24	Map3k11 (ENSPEMG00000018188) #25	Kcnk7 (ENSPEMG00000005045) #26	Ehbp1l1 (ENSPEMG00000009256) #27	Fam89b (ENSPEMG00000024505)	Znrd2 (ENSPEMG00000019199) #29	Ltbp3 (ENSPEMG00000019206) #30	Scyl1 (ENSPEMG00000005537) #31	Frmd8 (ENSPEMG00000009382) #33	Slc25a45 (ENSPEMG00000013705) #34	Tigd3 (ENSPEMG00000008948) #35	Dpf2 (ENSPEMG00000010943) #36	Cdc42ep2 (ENSPEMG00000027118) #37	Pola2 (ENSPEMG00000007401)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735.j #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B.g #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070.g.b #36	ENSGT00940000161776 #37	ENSGT00390000016784
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000015494 #11	ENSMAUG00000015164	ENSMAUG00000015524 #11	ENSMAUG00000016896	Fosl1 (ENSMAUG00000015702) #12	Ccdc85b (ENSMAUG00000002543)	Fibp (ENSMAUG00000015299) #13	Ctsw (ENSMAUG00000016334) #14	Efemp2 (ENSMAUG00000015572) #15	Mus81 (ENSMAUG00000015377) #16	Snx32 (ENSMAUG00000015400) #18	Ovol1 (ENSMAUG00000014972) #19	Ap5b1 (ENSMAUG00000014962)	Rnaseh2c (ENSMAUG00000016346) #20	Kat5 (ENSMAUG00000016030) #21	ENSMAUG00000015428 #22	Sipa1 (ENSMAUG00000014904) #23	ENSMAUG00000014632 #24	ENSMAUG00000015724	Kcnk7 (ENSMAUG00000015478) #26	ENSMAUG00000015267 #27	Fam89b (ENSMAUG00000015467)	Znrd2 (ENSMAUG00000014446) #29	Ltbp3 (ENSMAUG00000015048) #30	Scyl1 (ENSMAUG00000015850) #31	Frmd8 (ENSMAUG00000017785) #33	Slc25a45 (ENSMAUG00000014882) #34	Tigd3 (ENSMAUG00000016982) #35	Dpf2 (ENSMAUG00000015922) #36	Cdc42ep2 (ENSMAUG00000014231) #37	Pola2 (ENSMAUG00000015136)
Chinese hamster chok1gshd	MODERN SPECIES	401	Pola2 (ENSCGRG00001014528)	Cdc42ep2 (ENSCGRG00001005189) #37	Dpf2 (ENSCGRG00001020101) #36	Tigd3 (ENSCGRG00001010362) #35	Slc25a45 (ENSCGRG00001011502) #34	ENSCGRG00001017527 #33	Scyl1 (ENSCGRG00001003404) #31	Ltbp3 (ENSCGRG00001023193) #30	Znrd2 (ENSCGRG00001016064) #29	Fam89b (ENSCGRG00001020511)	ENSCGRG00001012173 #27	Kcnk7 (ENSCGRG00001021394) #26	Map3k11 (ENSCGRG00001016647) #25	Pcnx3 (ENSCGRG00001017754) #24	Sipa1 (ENSCGRG00001011939) #23	Rela (ENSCGRG00001021513) #22	Ovol1 (ENSCGRG00001004785) #19	Nscme3l (ENSCGRG00001012239)	Cfl1 (ENSCGRG00001020586) ##17	Mus81 (ENSCGRG00001014434) #16	Efemp2 (ENSCGRG00001016543) #15	Ctsw (ENSCGRG00001014539) #14	AI837181 (ENSCGRG00001018309)	Drap1 (ENSCGRG00001018888) #11	ENSCGRG00001011937 #10	Sart1 (ENSCGRG00001021367) #9	Eif1ad (ENSCGRG00001002718) #8	ENSCGRG00001021595 #7	Cst6 (ENSCGRG00001021274)	Catsper1 (ENSCGRG00001015502)	Gal3st3 (ENSCGRG00001000651)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Sciuridae	ANCESTRAL SPECIES	22	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Marmotini	ANCESTRAL SPECIES	6	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Squirrel	MODERN SPECIES	199	SART1 (ENSSTOG00000023375) #9	ENSSTOG00000021440 #10	DRAP1 (ENSSTOG00000029473) #11	C11orf68 (ENSSTOG00000021433)	FOSL1 (ENSSTOG00000003296) #12	CCDC85B (ENSSTOG00000003291)	FIBP (ENSSTOG00000003282) #13	CTSW (ENSSTOG00000003261) #14	EFEMP2 (ENSSTOG00000003247) #15	MUS81 (ENSSTOG00000003226) #16	ENSSTOG00000027968 ##17	OVOL1 (ENSSTOG00000003150) #19	AP5B1 (ENSSTOG00000025490)	RNASEH2C (ENSSTOG00000019410) #20	KAT5 (ENSSTOG00000003133) #21	RELA (ENSSTOG00000027336) #22	SIPA1 (ENSSTOG00000021216) #23	PCNX3 (ENSSTOG00000014339) #24	MAP3K11 (ENSSTOG00000028982) #25	KCNK7 (ENSSTOG00000014297) #26	EHBP1L1 (ENSSTOG00000025958) #27	ZNRD2 (ENSSTOG00000014294) #29	LTBP3 (ENSSTOG00000024436) #30	SCYL1 (ENSSTOG00000027207) #31	FRMD8 (ENSSTOG00000003760) #33	SLC25A45 (ENSSTOG00000000609) #34	TIGD3 (ENSSTOG00000024637) #35	DPF2 (ENSSTOG00000003746) #36	POLA2 (ENSSTOG00000003707)	ENSSTOG00000006651	CAPN1 (ENSSTOG00000006603)
Arctic ground squirrel	MODERN SPECIES	172	SART1 (ENSUPAG00010009136) #9	ENSUPAG00010009160 #10	DRAP1 (ENSUPAG00010009170) #11	C11orf68 (ENSUPAG00010009191)	FOSL1 (ENSUPAG00010009206) #12	CCDC85B (ENSUPAG00010009218)	FIBP (ENSUPAG00010009224) #13	CTSW (ENSUPAG00010009250) #14	EFEMP2 (ENSUPAG00010009268) #15	MUS81 (ENSUPAG00010009321) #16	ENSUPAG00010009391 ##17	OVOL1 (ENSUPAG00010009400) #19	AP5B1 (ENSUPAG00010009408)	RNASEH2C (ENSUPAG00010009417) #20	KAT5 (ENSUPAG00010009430) #21	RELA (ENSUPAG00010009489) #22	SIPA1 (ENSUPAG00010009517) #23	PCNX3 (ENSUPAG00010009555) #24	MAP3K11 (ENSUPAG00010009634) #25	KCNK7 (ENSUPAG00010009649) #26	EHBP1L1 (ENSUPAG00010009664) #27	FAM89B (ENSUPAG00010009704)	ZNRD2 (ENSUPAG00010009719) #29	LTBP3 (ENSUPAG00010009730) #30	SCYL1 (ENSUPAG00010009796) #31	FRMD8 (ENSUPAG00010009843) #33	SLC25A45 (ENSUPAG00010009854) #34	TIGD3 (ENSUPAG00010009889) #35	DPF2 (ENSUPAG00010009890) #36	CDC42EP2 (ENSUPAG00010009916) #37	POLA2 (ENSUPAG00010009926)
Alpin marmot	MODERN SPECIES	86	SART1 (ENSMMMG00000021324) #9	TSGA10IP (ENSMMMG00000021311) #10	DRAP1 (ENSMMMG00000021308) #11	C11orf68 (ENSMMMG00000021303)	FOSL1 (ENSMMMG00000021300) #12	CCDC85B (ENSMMMG00000021299)	FIBP (ENSMMMG00000021292) #13	CTSW (ENSMMMG00000021290) #14	EFEMP2 (ENSMMMG00000021157) #15	MUS81 (ENSMMMG00000021138) #16	ENSMMMG00000021134 ##17	OVOL1 (ENSMMMG00000021109) #19	AP5B1 (ENSMMMG00000021100)	RNASEH2C (ENSMMMG00000021088) #20	KAT5 (ENSMMMG00000019926) #21	ENSMMMG00000019907 #22	SIPA1 (ENSMMMG00000019896) #23	PCNX3 (ENSMMMG00000019825) #24	MAP3K11 (ENSMMMG00000019816) #25	KCNK7 (ENSMMMG00000019811) #26	ENSMMMG00000019797 #27	FAM89B (ENSMMMG00000019789)	LTBP3 (ENSMMMG00000019759) #30	SCYL1 (ENSMMMG00000019740) #31
Eurasian red squirrel	MODERN SPECIES	2	SART1 (ENSSVLG00005008726) #9	TSGA10IP (ENSSVLG00005008758) #10	DRAP1 (ENSSVLG00005008816) #11	C11orf68 (ENSSVLG00005008904)	FOSL1 (ENSSVLG00005008959) #12	CCDC85B (ENSSVLG00005009008)	FIBP (ENSSVLG00005009029) #13	CTSW (ENSSVLG00005009078) #14	EFEMP2 (ENSSVLG00005009209) #15	MUS81 (ENSSVLG00005009276) #16	CFL1 (ENSSVLG00005009374) ##17	OVOL1 (ENSSVLG00005009411) #19	AP5B1 (ENSSVLG00005009450)	RNASEH2C (ENSSVLG00005009467) #20	KAT5 (ENSSVLG00005009513) #21	RELA (ENSSVLG00005009743) #22	SIPA1 (ENSSVLG00005009819) #23	PCNX3 (ENSSVLG00005009907) #24	MAP3K11 (ENSSVLG00005009961) #25	KCNK7 (ENSSVLG00005010023) #26	EHBP1L1 (ENSSVLG00005010102) #27	ENSSVLG00005010208	ZNRD2 (ENSSVLG00005010255) #29	LTBP3 (ENSSVLG00005010309) #30	SCYL1 (ENSSVLG00005010565) #31	ENSSVLG00005010752 #32	FRMD8 (ENSSVLG00005010868) #33	SLC25A45 (ENSSVLG00005011240) #34	TIGD3 (ENSSVLG00005011576) #35	DPF2 (ENSSVLG00005011657) #36	CDC42EP2 (ENSSVLG00005011714) #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000007071.d #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027.d #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000017941 #10	ENSHGLG00000037797	DRAP1 (ENSHGLG00000044653) #11	FOSL1 (ENSHGLG00000040823) #12	CCDC85B (ENSHGLG00000020886)	FIBP (ENSHGLG00000009704) #13	CTSW (ENSHGLG00000041472) #14	EFEMP2 (ENSHGLG00000012609) #15	MUS81 (ENSHGLG00000011376) #16	ENSHGLG00000011974 ##17	OVOL1 (ENSHGLG00000046156) #19	AP5B1 (ENSHGLG00000014408)	RNASEH2C (ENSHGLG00000013478) #20	KAT5 (ENSHGLG00000009569) #21	ENSHGLG00000021418	RELA (ENSHGLG00000017814) #22	SIPA1 (ENSHGLG00000009520) #23	PCNX3 (ENSHGLG00000010897) #24	MAP3K11 (ENSHGLG00000044782) #25	KCNK7 (ENSHGLG00000012740) #26	EHBP1L1 (ENSHGLG00000019070) #27	FAM89B (ENSHGLG00000013991)	SSSCA1 (ENSHGLG00000048216) #29	SCYL1 (ENSHGLG00000018730) #31	FRMD8 (ENSHGLG00000018755) #33	SLC25A45 (ENSHGLG00000007151) #34	TIGD3 (ENSHGLG00000008128) #35	DPF2 (ENSHGLG00000010867) #36	CDC42EP2 (ENSHGLG00000006786) #37	ENSHGLG00000008855	CAPN1 (ENSHGLG00000019308)
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000007071.d #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027.d #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Guinea pig	MODERN SPECIES	42	EIF1AD (ENSCPOG00000038958) #8	SART1 (ENSCPOG00000020882) #9	ENSCPOG00000024494 #10	DRAP1 (ENSCPOG00000020640) #11	C11orf68 (ENSCPOG00000036866)	FOSL1 (ENSCPOG00000032387) #12	FIBP (ENSCPOG00000002977) #13	CTSW (ENSCPOG00000002974) #14	EFEMP2 (ENSCPOG00000008083) #15	MUS81 (ENSCPOG00000008072) #16	ENSCPOG00000008063 ##17	OVOL1 (ENSCPOG00000030601) #19	AP5B1 (ENSCPOG00000011201)	RNASEH2C (ENSCPOG00000013696) #20	KAT5 (ENSCPOG00000013693) #21	RELA (ENSCPOG00000020593) #22	SIPA1 (ENSCPOG00000025071) #23	PCNX3 (ENSCPOG00000013681) #24	MAP3K11 (ENSCPOG00000034854) #25	Kcnk7 (ENSCPOG00000013676) #26	ENSCPOG00000013669 #27	FAM89B (ENSCPOG00000037500)	ZNRD2 (ENSCPOG00000037280) #29	LTBP3 (ENSCPOG00000033168) #30	SCYL1 (ENSCPOG00000013585) #31	FRMD8 (ENSCPOG00000010221) #33	SLC25A45 (ENSCPOG00000010217) #34	TIGD3 (ENSCPOG00000009317) #35	DPF2 (ENSCPOG00000021560) #36	CDC42EP2 (ENSCPOG00000035428) #37	POLA2 (ENSCPOG00000001851)
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000007071.d #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027.d #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Degu	MODERN SPECIES	59	SART1 (ENSODEG00000017777) #9	ENSODEG00000017813 #10	DRAP1 (ENSODEG00000017786) #11	C11orf68 (ENSODEG00000018029)	FOSL1 (ENSODEG00000017672) #12	CCDC85B (ENSODEG00000020562)	FIBP (ENSODEG00000017861) #13	CTSW (ENSODEG00000017838) #14	EFEMP2 (ENSODEG00000017823) #15	MUS81 (ENSODEG00000017768) #16	ENSODEG00000017910 ##17	OVOL1 (ENSODEG00000017779) #19	AP5B1 (ENSODEG00000017827)	RNASEH2C (ENSODEG00000017806) #20	KAT5 (ENSODEG00000017848) #21	ENSODEG00000017931 #22	SIPA1 (ENSODEG00000017904) #23	PCNX3 (ENSODEG00000017982) #24	MAP3K11 (ENSODEG00000017889) #25	KCNK7 (ENSODEG00000017832) #26	ENSODEG00000017844 #27	FAM89B (ENSODEG00000017913)	ZNRD2 (ENSODEG00000017929) #29	ENSODEG00000017903 #30	ENSODEG00000017829 #30	SCYL1 (ENSODEG00000018032) #31	ENSODEG00000017860	FRMD8 (ENSODEG00000017874) #33	SLC25A45 (ENSODEG00000017936) #34	ENSODEG00000020477	TIGD3 (ENSODEG00000020531) #35
Long-tailed chinchilla	MODERN SPECIES	129	SART1 (ENSCLAG00000016593) #9	TSGA10IP (ENSCLAG00000017240) #10	DRAP1 (ENSCLAG00000016245) #11	C11orf68 (ENSCLAG00000018033)	FOSL1 (ENSCLAG00000016730) #12	CCDC85B (ENSCLAG00000018109)	FIBP (ENSCLAG00000017005) #13	CTSW (ENSCLAG00000016445) #14	EFEMP2 (ENSCLAG00000016031) #15	MUS81 (ENSCLAG00000016602) #16	ENSCLAG00000016067 ##17	OVOL1 (ENSCLAG00000016426) #19	AP5B1 (ENSCLAG00000016777)	RNASEH2C (ENSCLAG00000016534) #20	KAT5 (ENSCLAG00000015794) #21	RELA (ENSCLAG00000015473) #22	SIPA1 (ENSCLAG00000015627) #23	PCNX3 (ENSCLAG00000016745) #24	MAP3K11 (ENSCLAG00000015438) #25	KCNK7 (ENSCLAG00000015744) #26	ENSCLAG00000016303 #27	FAM89B (ENSCLAG00000016262)	ZNRD2 (ENSCLAG00000017141) #29	LTBP3 (ENSCLAG00000016658) #30	SCYL1 (ENSCLAG00000016702) #31	FRMD8 (ENSCLAG00000017172) #33	SLC25A45 (ENSCLAG00000016505) #34	TIGD3 (ENSCLAG00000016665) #35	DPF2 (ENSCLAG00000016884) #36	CDC42EP2 (ENSCLAG00000015800) #37	POLA2 (ENSCLAG00000016655)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159867 #22
Common shrew	MODERN SPECIES	5313																RELA (ENSSARG00000003535) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Dolphin	MODERN SPECIES	729																RELA (ENSTTRG00000002311) #22	SIPA1 (ENSTTRG00000002309) #23	ENSTTRG00000002292 #24	MAP3K11 (ENSTTRG00000002286) #25	KCNK7 (ENSTTRG00000002281) #26	EHBP1L1 (ENSTTRG00000002268) #27	ENSTTRG00000002265	ZNRD2 (ENSTTRG00000002260) #29	LTBP3 (ENSTTRG00000002248) #30	SCYL1 (ENSTTRG00000002233) #31
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Vaquita	MODERN SPECIES	19	SART1 (ENSPSNG00000012534) #9	TSGA10IP (ENSPSNG00000012372) #10	DRAP1 (ENSPSNG00000012221) #11	C11orf68 (ENSPSNG00000012155)	CCDC85B (ENSPSNG00000012133)	FOSL1 (ENSPSNG00000012035) #12	FIBP (ENSPSNG00000011943) #13	CTSW (ENSPSNG00000011706) #14	MUS81 (ENSPSNG00000011525) #16	EFEMP2 (ENSPSNG00000011289) #15	SNX32 (ENSPSNG00000011193) #18	OVOL1 (ENSPSNG00000011105) #19	AP5B1 (ENSPSNG00000011066)	RNASEH2C (ENSPSNG00000011030) #20	KAT5 (ENSPSNG00000010834) #21	RELA (ENSPSNG00000010702) #22	SIPA1 (ENSPSNG00000010376) #23	PCNX3 (ENSPSNG00000010272) #24	MAP3K11 (ENSPSNG00000010175) #25	KCNK7 (ENSPSNG00000010106) #26	EHBP1L1 (ENSPSNG00000010055) #27	ZNRD2 (ENSPSNG00000010013) #29	LTBP3 (ENSPSNG00000009494) #30	SCYL1 (ENSPSNG00000009241) #31	FRMD8 (ENSPSNG00000009044) #33	SLC25A45 (ENSPSNG00000008926) #34	TIGD3 (ENSPSNG00000008901) #35	DPF2 (ENSPSNG00000008806) #36	CDC42EP2 (ENSPSNG00000008694) #37	POLA2 (ENSPSNG00000008641)	CAPN1 (ENSPSNG00000008586)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Narwhal	MODERN SPECIES	314	TSGA10IP (ENSMMNG00015016095) #10	DRAP1 (ENSMMNG00015015966) #11	C11orf68 (ENSMMNG00015015928)	FOSL1 (ENSMMNG00015021917) #12	CCDC85B (ENSMMNG00015021916)	FIBP (ENSMMNG00015021915) #13	CTSW (ENSMMNG00015021911) #14	EFEMP2 (ENSMMNG00015021909) #15	MUS81 (ENSMMNG00015021900) #16	ENSMMNG00015021893 ##17	SNX32 (ENSMMNG00015021885) #18	OVOL1 (ENSMMNG00015021876) #19	AP5B1 (ENSMMNG00015021871)	RNASEH2C (ENSMMNG00015021867) #20	KAT5 (ENSMMNG00015021854) #21	RELA (ENSMMNG00015021835) #22	SIPA1 (ENSMMNG00015021815) #23	PCNX3 (ENSMMNG00015021779) #24	MAP3K11 (ENSMMNG00015021759) #25	KCNK7 (ENSMMNG00015021749) #26	EHBP1L1 (ENSMMNG00015021735) #27	FAM89B (ENSMMNG00015021727)	ZNRD2 (ENSMMNG00015021719) #29	LTBP3 (ENSMMNG00015021658) #30	SCYL1 (ENSMMNG00015021582) #31	FRMD8 (ENSMMNG00015021527) #33	SLC25A45 (ENSMMNG00015021502) #34	TIGD3 (ENSMMNG00015021495) #35	DPF2 (ENSMMNG00015021464) #36	CDC42EP2 (ENSMMNG00015021445) #37	POLA2 (ENSMMNG00015021434)
Beluga whale	MODERN SPECIES	7	SART1 (ENSDLEG00000003065) #9	TSGA10IP (ENSDLEG00000003083) #10	DRAP1 (ENSDLEG00000003122) #11	CUNH11orf68 (ENSDLEG00000003133)	FOSL1 (ENSDLEG00000003140) #12	CCDC85B (ENSDLEG00000003151)	FIBP (ENSDLEG00000003158) #13	CTSW (ENSDLEG00000003171) #14	EFEMP2 (ENSDLEG00000003213) #15	MUS81 (ENSDLEG00000003256) #16	SNX32 (ENSDLEG00000003272) #18	OVOL1 (ENSDLEG00000003294) #19	AP5B1 (ENSDLEG00000003298)	ENSDLEG00000003308 #20	KAT5 (ENSDLEG00000003330) #21	RELA (ENSDLEG00000003353) #22	SIPA1 (ENSDLEG00000003379) #23	PCNX3 (ENSDLEG00000003462) #24	MAP3K11 (ENSDLEG00000003523) #25	KCNK7 (ENSDLEG00000003553) #26	EHBP1L1 (ENSDLEG00000003561) #27	FAM89B (ENSDLEG00000003573)	SSSCA1 (ENSDLEG00000003580) #29	LTBP3 (ENSDLEG00000003592) #30	SCYL1 (ENSDLEG00000003647) #31	FRMD8 (ENSDLEG00000003660) #33	TIGD3 (ENSDLEG00000003670) #35	DPF2 (ENSDLEG00000003675) #36	CDC42EP2 (ENSDLEG00000003714) #37	POLA2 (ENSDLEG00000003718)	CAPN1 (ENSDLEG00000003736)
Sperm whale	MODERN SPECIES	21													AP5B1 (ENSPCTG00005019335)	RNASEH2C (ENSPCTG00005019317) #20	KAT5 (ENSPCTG00005019047) #21	RELA (ENSPCTG00005018948) #22	SIPA1 (ENSPCTG00005018643) #23	PCNX3 (ENSPCTG00005018536) #24	MAP3K11 (ENSPCTG00005018454) #25	KCNK7 (ENSPCTG00005018347) #26	EHBP1L1 (ENSPCTG00005018287) #27	FAM89B (ENSPCTG00005018214)	SSSCA1 (ENSPCTG00005018192) #29	LTBP3 (ENSPCTG00005017850) #30	SCYL1 (ENSPCTG00005017761) #31	FRMD8 (ENSPCTG00005017456) #33	SLC25A45 (ENSPCTG00005017097) #34	TIGD3 (ENSPCTG00005017052) #35	DPF2 (ENSPCTG00005016883) #36	CDC42EP2 (ENSPCTG00005016840) #37	POLA2 (ENSPCTG00005016542)
Blue whale	MODERN SPECIES	19	TSGA10IP (ENSBMSG00010009866) #10	DRAP1 (ENSBMSG00010009835) #11	C11orf68 (ENSBMSG00010009823)	FOSL1 (ENSBMSG00010009810) #12	CCDC85B (ENSBMSG00010009800)	FIBP (ENSBMSG00010009786) #13	CTSW (ENSBMSG00010009765) #14	EFEMP2 (ENSBMSG00010009737) #15	MUS81 (ENSBMSG00010009717) #16	ENSBMSG00010009699 ##17	SNX32 (ENSBMSG00010009683) #18	OVOL1 (ENSBMSG00010009665) #19	AP5B1 (ENSBMSG00010009658)	RNASEH2C (ENSBMSG00010009649) #20	KAT5 (ENSBMSG00010009591) #21	RELA (ENSBMSG00010009559) #22	SIPA1 (ENSBMSG00010009520) #23	PCNX3 (ENSBMSG00010009488) #24	MAP3K11 (ENSBMSG00010009462) #25	KCNK7 (ENSBMSG00010009449) #26	EHBP1L1 (ENSBMSG00010009431) #27	FAM89B (ENSBMSG00010009422)	ZNRD2 (ENSBMSG00010009420) #29	LTBP3 (ENSBMSG00010009392) #30	SCYL1 (ENSBMSG00010009366) #31	FRMD8 (ENSBMSG00010009302) #33	SLC25A45 (ENSBMSG00010009289) #34	TIGD3 (ENSBMSG00010009285) #35	ENSBMSG00010009267 #36	CDC42EP2 (ENSBMSG00010009252) #37	POLA2 (ENSBMSG00010009236)
Pecora	ANCESTRAL SPECIES	13	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Yarkand deer	MODERN SPECIES	11	SART1 (ENSCHYG00000000390) #9	TSGA10IP (ENSCHYG00000000365) #10	ENSCHYG00000000300 #11	C11orf68 (ENSCHYG00000000263)	FOSL1 (ENSCHYG00000000249) #12	CCDC85B (ENSCHYG00000000237)	FIBP (ENSCHYG00000000197) #13	CTSW (ENSCHYG00000000155) #14	MUS81 (ENSCHYG00000000130) #16	EFEMP2 (ENSCHYG00000000095) #15	OVOL1 (ENSCHYG00000004760) #19	AP5B1 (ENSCHYG00000004748)	RNASEH2C (ENSCHYG00000004731) #20	KAT5 (ENSCHYG00000004627) #21	ENSCHYG00000004577	RELA (ENSCHYG00000004513) #22	SIPA1 (ENSCHYG00000004453) #23	PCNX3 (ENSCHYG00000004406) #24	MAP3K11 (ENSCHYG00000004371) #25	KCNK7 (ENSCHYG00000004345) #26	EHBP1L1 (ENSCHYG00000004123) #27	FAM89B (ENSCHYG00000004077)	ZNRD2 (ENSCHYG00000004064) #29	LTBP3 (ENSCHYG00000003945) #30	SCYL1 (ENSCHYG00000003862) #31	ENSCHYG00000003838	FRMD8 (ENSCHYG00000003743) #33	SLC25A45 (ENSCHYG00000003656) #34	TIGD3 (ENSCHYG00000003639) #35	DPF2 (ENSCHYG00000003588) #36	CDC42EP2 (ENSCHYG00000003563) #37
Percora_a	ANCESTRAL SPECIES	16	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Bovidae	ANCESTRAL SPECIES	16	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Bovinae	ANCESTRAL SPECIES	24	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Bos	ANCESTRAL SPECIES	11	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Bos_b	ANCESTRAL SPECIES	10	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Hybrid Bos Indicus	MODERN SPECIES	21	SART1 (ENSBIXG00005017029) #9	TSGA10IP (ENSBIXG00005016955) #10	DRAP1 (ENSBIXG00005016907) #11	C11orf68 (ENSBIXG00005016817)	FOSL1 (ENSBIXG00005016793) #12	CCDC85B (ENSBIXG00005016764)	FIBP (ENSBIXG00005002705) #13	CTSW (ENSBIXG00005002695) #14	EFEMP2 (ENSBIXG00005016630) #15	MUS81 (ENSBIXG00005002673) #16	ENSBIXG00005016571 ##17	ENSBIXG00005016531	OVOL1 (ENSBIXG00005016524) #19	AP5B1 (ENSBIXG00005005984)	KAT5 (ENSBIXG00005016472) #21	RELA (ENSBIXG00005016337) #22	SIPA1 (ENSBIXG00005016294) #23	PCNX3 (ENSBIXG00005016241) #24	MAP3K11 (ENSBIXG00005016123) #25	KCNK7 (ENSBIXG00005016095) #26	EHBP1L1 (ENSBIXG00005016041) #27	ZNRD2 (ENSBIXG00005016030) #29	LTBP3 (ENSBIXG00005015979) #30	SCYL1 (ENSBIXG00005015860) #31	FRMD8 (ENSBIXG00005015763) #33	TIGD3 (ENSBIXG00005015667) #35	SLC25A45 (ENSBIXG00005015642) #34	DPF2 (ENSBIXG00005015594) #36	CDC42EP2 (ENSBIXG00005015521) #37	POLA2 (ENSBIXG00005015506)	ENSBIXG00005015485
Cow	MODERN SPECIES	21	SART1 (ENSBTAG00000003094) #9	TSGA10IP (ENSBTAG00000003093) #10	DRAP1 (ENSBTAG00000006199) #11	C29H11orf68 (ENSBTAG00000006195)	FOSL1 (ENSBTAG00000006194) #12	ENSBTAG00000049377	FIBP (ENSBTAG00000020775) #13	CTSW (ENSBTAG00000020773) #14	EFEMP2 (ENSBTAG00000021457) #15	MUS81 (ENSBTAG00000021456) #16	CFL1 (ENSBTAG00000021455) ##17	OVOL1 (ENSBTAG00000012656) #19	AP5B1 (ENSBTAG00000046875)	RNASEH2C (ENSBTAG00000005577) #20	KAT5 (ENSBTAG00000005578) #21	RELA (ENSBTAG00000013895) #22	SIPA1 (ENSBTAG00000013884) #23	PCNX3 (ENSBTAG00000003759) #24	MAP3K11 (ENSBTAG00000004114) #25	KCNK7 (ENSBTAG00000010802) #26	EHBP1L1 (ENSBTAG00000009554) #27	FAM89B (ENSBTAG00000003712)	ZNRD2 (ENSBTAG00000003713) #29	LTBP3 (ENSBTAG00000006747) #30	SCYL1 (ENSBTAG00000006740) #31	FRMD8 (ENSBTAG00000002039) #33	SLC25A45 (ENSBTAG00000008568) #34	TIGD3 (ENSBTAG00000003079) #35	DPF2 (ENSBTAG00000003077) #36	CDC42EP2 (ENSBTAG00000032089) #37	POLA2 (ENSBTAG00000011455)
Bos_a	ANCESTRAL SPECIES	51	ENSGT00390000011180 #8	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Wild yak	MODERN SPECIES	625	EIF1AD (ENSBMUG00000000746) #8	SART1 (ENSBMUG00000000780) #9	TSGA10IP (ENSBMUG00000000799) #10	DRAP1 (ENSBMUG00000000817) #11	C11orf68 (ENSBMUG00000000828)	FOSL1 (ENSBMUG00000000869) #12	FIBP (ENSBMUG00000000899) #13	CTSW (ENSBMUG00000000910) #14	EFEMP2 (ENSBMUG00000000923) #15	MUS81 (ENSBMUG00000000950) #16	ENSBMUG00000000980 ##17	OVOL1 (ENSBMUG00000001004) #19	AP5B1 (ENSBMUG00000001015)	ENSBMUG00000001038 #20	KAT5 (ENSBMUG00000001087) #21	RELA (ENSBMUG00000001126) #22	SIPA1 (ENSBMUG00000001199) #23	PCNX3 (ENSBMUG00000001322) #24	MAP3K11 (ENSBMUG00000001383) #25	KCNK7 (ENSBMUG00000001442) #26	EHBP1L1 (ENSBMUG00000001799) #27	ENSBMUG00000001958	ZNRD2 (ENSBMUG00000001971) #29	LTBP3 (ENSBMUG00000002014) #30	SCYL1 (ENSBMUG00000002080) #31	FRMD8 (ENSBMUG00000002234) #33	SLC25A45 (ENSBMUG00000002297) #34	TIGD3 (ENSBMUG00000002328) #35	DPF2 (ENSBMUG00000002373) #36	CDC42EP2 (ENSBMUG00000002398) #37	POLA2 (ENSBMUG00000002428)
American bison	MODERN SPECIES	3011	TSGA10IP (ENSBBBG00000024914) #10	DRAP1 (ENSBBBG00000024888) #11	C11orf68 (ENSBBBG00000006811)	FOSL1 (ENSBBBG00000024793) #12	CCDC85B (ENSBBBG00000024737)	FIBP (ENSBBBG00000024733) #13	ENSBBBG00000024692 #14	EFEMP2 (ENSBBBG00000000192) #15	MUS81 (ENSBBBG00000024419) #16	ENSBBBG00000006333 ##17	ENSBBBG00000024283 #18	OVOL1 (ENSBBBG00000024273) #19	AP5B1 (ENSBBBG00000006321)	ENSBBBG00000024257 #20	KAT5 (ENSBBBG00000024233) #21	RELA (ENSBBBG00000024071) #22	SIPA1 (ENSBBBG00000024043) #23	PCNX3 (ENSBBBG00000006795) #24	MAP3K11 (ENSBBBG00000006792) #25	KCNK7 (ENSBBBG00000023946) #26	EHBP1L1 (ENSBBBG00000008635) #27	FAM89B (ENSBBBG00000023891)	ZNRD2 (ENSBBBG00000000309) #29	ENSBBBG00000008632 #30	SCYL1 (ENSBBBG00000006208) #31	TSPAN12 (ENSBBBG00000023746)
Caprinae	ANCESTRAL SPECIES	20	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Rambouillet Sheep	MODERN SPECIES	13	SART1 (ENSOARG00020022030) #9	TSGA10IP (ENSOARG00020021974) #10	DRAP1 (ENSOARG00020021879) #11	C11orf68 (ENSOARG00020021832)	FOSL1 (ENSOARG00020021544) #12	CCDC85B (ENSOARG00020021510)	FIBP (ENSOARG00020021406) #13	CTSW (ENSOARG00020021324) #14	EFEMP2 (ENSOARG00020021256) #15	MUS81 (ENSOARG00020021175) #16	CFL1 (ENSOARG00020021139) ##17	OVOL1 (ENSOARG00020021078) #19	AP5B1 (ENSOARG00020021054)	RNASEH2C (ENSOARG00020021025) #20	KAT5 (ENSOARG00020020808) #21	RELA (ENSOARG00020020678) #22	SIPA1 (ENSOARG00020020345) #23	PCNX3 (ENSOARG00020020108) #24	MAP3K11 (ENSOARG00020019934) #25	KCNK7 (ENSOARG00020019794) #26	EHBP1L1 (ENSOARG00020019180) #27	FAM89B (ENSOARG00020019087)	ZNRD2 (ENSOARG00020018929) #29	LTBP3 (ENSOARG00020018123) #30	SCYL1 (ENSOARG00020017916) #31	FRMD8 (ENSOARG00020017424) #33	SLC25A45 (ENSOARG00020017021) #34	TIGD3 (ENSOARG00020016977) #35	DPF2 (ENSOARG00020016810) #36	CDC42EP2 (ENSOARG00020016778) #37	POLA2 (ENSOARG00020016734)
Goat	MODERN SPECIES	21	SART1 (ENSCHIG00000016364) #9	TSGA10IP (ENSCHIG00000018850) #10	DRAP1 (ENSCHIG00000020197) #11	C11orf68 (ENSCHIG00000006648)	FOSL1 (ENSCHIG00000022890) #12	CCDC85B (ENSCHIG00000001753)	FIBP (ENSCHIG00000015612) #13	CTSW (ENSCHIG00000005568) #14	EFEMP2 (ENSCHIG00000016956) #15	MUS81 (ENSCHIG00000023967) #16	ENSCHIG00000024457 ##17	OVOL1 (ENSCHIG00000017028) #19	AP5B1 (ENSCHIG00000022385)	RNASEH2C (ENSCHIG00000013681) #20	KAT5 (ENSCHIG00000015445) #21	RELA (ENSCHIG00000015135) #22	SIPA1 (ENSCHIG00000008331) #23	PCNX3 (ENSCHIG00000014153) #24	MAP3K11 (ENSCHIG00000010206) #25	KCNK7 (ENSCHIG00000019755) #26	EHBP1L1 (ENSCHIG00000013648) #27	FAM89B (ENSCHIG00000013562)	ZNRD2 (ENSCHIG00000024780) #29	LTBP3 (ENSCHIG00000023571) #30	SCYL1 (ENSCHIG00000001421) #31	FRMD8 (ENSCHIG00000013492) #33	SLC25A45 (ENSCHIG00000015690) #34	TIGD3 (ENSCHIG00000006241) #35	DPF2 (ENSCHIG00000011852) #36	CDC42EP2 (ENSCHIG00000010857) #37	POLA2 (ENSCHIG00000021506)
Siberian musk deer	MODERN SPECIES	1224								EFEMP2 (ENSMMSG00000016890) #15	MUS81 (ENSMMSG00000016929) #16	ENSMMSG00000017008 ##17	OVOL1 (ENSMMSG00000017111) #19	AP5B1 (ENSMMSG00000017134)	RNASEH2C (ENSMMSG00000017155) #20	KAT5 (ENSMMSG00000017197) #21	ENSMMSG00000017483	RELA (ENSMMSG00000017510) #22	SIPA1 (ENSMMSG00000017591) #23	PCNX3 (ENSMMSG00000017662) #24	MAP3K11 (ENSMMSG00000017766) #25	KCNK7 (ENSMMSG00000017908) #26	EHBP1L1 (ENSMMSG00000018073) #27	FAM89B (ENSMMSG00000018377)	ZNRD2 (ENSMMSG00000018408) #29	LTBP3 (ENSMMSG00000018449) #30	SCYL1 (ENSMMSG00000019006) #31	FRMD8 (ENSMMSG00000019097) #33	SLC25A45 (ENSMMSG00000019423) #34	TIGD3 (ENSMMSG00000019677) #35	DPF2 (ENSMMSG00000019700) #36	CDC42EP2 (ENSMMSG00000019837) #37	POLA2 (ENSMMSG00000019865)
Camelidae	ANCESTRAL SPECIES	18	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Arabian camel	MODERN SPECIES	1	TSGA10IP (ENSCDRG00005017817) #10	DRAP1 (ENSCDRG00005017846) #11	C11orf68 (ENSCDRG00005017944)	FOSL1 (ENSCDRG00005017990) #12	CCDC85B (ENSCDRG00005018098)	FIBP (ENSCDRG00005018117) #13	CTSW (ENSCDRG00005018197) #14	EFEMP2 (ENSCDRG00005018242) #15	MUS81 (ENSCDRG00005018289) #16	CFL1 (ENSCDRG00005018353) ##17	SNX32 (ENSCDRG00005004409) #18	OVOL1 (ENSCDRG00005004438) #19	AP5B1 (ENSCDRG00005004455)	RNASEH2C (ENSCDRG00005004469) #20	KAT5 (ENSCDRG00005004500) #21	RELA (ENSCDRG00005004662) #22	SIPA1 (ENSCDRG00005004728) #23	PCNX3 (ENSCDRG00005004937) #24	MAP3K11 (ENSCDRG00005005057) #25	KCNK7 (ENSCDRG00005005121) #26	EHBP1L1 (ENSCDRG00005005270) #27	FAM89B (ENSCDRG00005008598)	ZNRD2 (ENSCDRG00005008643) #29	ENSCDRG00005008670 #30	SCYL1 (ENSCDRG00005008708) #31	ENSCDRG00005008803	FRMD8 (ENSCDRG00005008838) #33	SLC25A45 (ENSCDRG00005009601) #34	TIGD3 (ENSCDRG00005009809) #35	DPF2 (ENSCDRG00005009844) #36	CDC42EP2 (ENSCDRG00005010110) #37
Alpaca	MODERN SPECIES	2042																ENSVPAG00000012088 #22
Suina	ANCESTRAL SPECIES	14	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Pig	MODERN SPECIES	10	DRAP1 (ENSSSCG00000012965) #11	C11orf68 (ENSSSCG00000012966)	FOSL1 (ENSSSCG00000012967) #12	CCDC85B (ENSSSCG00000012968)	FIBP (ENSSSCG00000012969) #13	CTSW (ENSSSCG00000012970) #14	EFEMP2 (ENSSSCG00000012971) #15	MUS81 (ENSSSCG00000012973) #16	CFL1 (ENSSSCG00000012974) ##17	SNX32 (ENSSSCG00000012975) #18	ENSSSCG00000047888	OVOL1 (ENSSSCG00000027361) #19	AP5B1 (ENSSSCG00000012978)	KAT5 (ENSSSCG00000012980) #21	RNASEH2C (ENSSSCG00000058858) #20	RELA (ENSSSCG00000012981) #22	SIPA1 (ENSSSCG00000012982) #23	PCNX3 (ENSSSCG00000012983) #24	MAP3K11 (ENSSSCG00000037531) #25	KCNK7 (ENSSSCG00000012986) #26	EHBP1L1 (ENSSSCG00000012988) #27	FAM89B (ENSSSCG00000035604)	ZNRD2 (ENSSSCG00000020737) #29	LTBP3 (ENSSSCG00000012985) #30	SCYL1 (ENSSSCG00000012984) #31	FRMD8 (ENSSSCG00000012992) #33	SLC25A45 (ENSSSCG00000012993) #34	TIGD3 (ENSSSCG00000012994) #35	DPF2 (ENSSSCG00000012995) #36	CDC42EP2 (ENSSSCG00000012996) #37	POLA2 (ENSSSCG00000012997)
Chacoan peccary	MODERN SPECIES	921	DRAP1 (ENSCWAG00000014068) #11	C11orf68 (ENSCWAG00000014112)	FOSL1 (ENSCWAG00000014154) #12	CCDC85B (ENSCWAG00000009004)	FIBP (ENSCWAG00000009035) #13	CTSW (ENSCWAG00000009238) #14	EFEMP2 (ENSCWAG00000009651) #15	MUS81 (ENSCWAG00000009729) #16	ENSCWAG00000009797 ##17	SNX32 (ENSCWAG00000009844) #18	OVOL1 (ENSCWAG00000009897) #19	ENSCWAG00000009953	AP5B1 (ENSCWAG00000009978)	RNASEH2C (ENSCWAG00000009995) #20	KAT5 (ENSCWAG00000010074) #21	RELA (ENSCWAG00000010818) #22	SIPA1 (ENSCWAG00000010997) #23	PCNX3 (ENSCWAG00000011280) #24	MAP3K11 (ENSCWAG00000011375) #25	KCNK7 (ENSCWAG00000011467) #26	EHBP1L1 (ENSCWAG00000011539) #27	FAM89B (ENSCWAG00000011651)	ZNRD2 (ENSCWAG00000011716) #29	LTBP3 (ENSCWAG00000011790) #30	SCYL1 (ENSCWAG00000012347) #31	FRMD8 (ENSCWAG00000012465) #33	SLC25A45 (ENSCWAG00000012825) #34	TIGD3 (ENSCWAG00000013059) #35	DPF2 (ENSCWAG00000013089) #36	CDC42EP2 (ENSCWAG00000013248) #37	POLA2 (ENSCWAG00000013270)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Carnivora	ANCESTRAL SPECIES	7	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Caniformia	ANCESTRAL SPECIES	21	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285.r #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169.f #29	ENSGT00940000160285.r #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Ursus	ANCESTRAL SPECIES	21	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00390000013169.f #29	ENSGT00940000160285.r #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000166861
American black bear	MODERN SPECIES	87	TSGA10IP (ENSUAMG00000020780) #10	DRAP1 (ENSUAMG00000020781) #11	C11orf68 (ENSUAMG00000020782)	FOSL1 (ENSUAMG00000020783) #12	CCDC85B (ENSUAMG00000020784)	FIBP (ENSUAMG00000020785) #13	CTSW (ENSUAMG00000020786) #14	EFEMP2 (ENSUAMG00000020787) #15	MUS81 (ENSUAMG00000020788) #16	CFL1 (ENSUAMG00000020789) ##17	SNX32 (ENSUAMG00000020790) #18	OVOL1 (ENSUAMG00000020791) #19	AP5B1 (ENSUAMG00000020792)	RNASEH2C (ENSUAMG00000020793) #20	KAT5 (ENSUAMG00000020794) #21	RELA (ENSUAMG00000020795) #22	SIPA1 (ENSUAMG00000020796) #23	PCNX3 (ENSUAMG00000020805) #24	MAP3K11 (ENSUAMG00000020824) #25	KCNK7 (ENSUAMG00000020825) #26	EHBP1L1 (ENSUAMG00000020826) #27	ZNRD2 (ENSUAMG00000020827) #29	LTBP3 (ENSUAMG00000020829) #30	SCYL1 (ENSUAMG00000020834) #31
Polar bear	MODERN SPECIES	328	EIF1AD (ENSUMAG00000010976) #8	SART1 (ENSUMAG00000010903) #9	TSGA10IP (ENSUMAG00000010871) #10	DRAP1 (ENSUMAG00000010861) #11	C11orf68 (ENSUMAG00000010858)	FOSL1 (ENSUMAG00000010856) #12	FIBP (ENSUMAG00000010853) #13	CTSW (ENSUMAG00000010844) #14	EFEMP2 (ENSUMAG00000010836) #15	MUS81 (ENSUMAG00000010811) #16	CFL1 (ENSUMAG00000010803) ##17	SNX32 (ENSUMAG00000010799) #18	ENSUMAG00000010794 #19	RNASEH2C (ENSUMAG00000010791) #20	ENSUMAG00000010712	RELA (ENSUMAG00000010628) #22	PCNX3 (ENSUMAG00000010216) #24	ENSUMAG00000010172 #25	KCNK7 (ENSUMAG00000010163) #26	EHBP1L1 (ENSUMAG00000010139) #27	ZNRD2 (ENSUMAG00000010129) #29	SCYL1 (ENSUMAG00000009767) #31	ENSUMAG00000009702 #34	DPF2 (ENSUMAG00000009693) #36	CDC42EP2 (ENSUMAG00000009688) #37	POLA2 (ENSUMAG00000009665)	ENSUMAG00000009656	ENSUMAG00000009622	ENSUMAG00000009606	CAPN1 (ENSUMAG00000008452)	SPDYC (ENSUMAG00000008279)
Giant Panda	MODERN SPECIES	7	TSGA10IP (ENSAMEG00000017276) #10	DRAP1 (ENSAMEG00000017278) #11	C11orf68 (ENSAMEG00000019183)	FOSL1 (ENSAMEG00000017284) #12	CCDC85B (ENSAMEG00000019223)	FIBP (ENSAMEG00000017293) #13	CTSW (ENSAMEG00000017301) #14	EFEMP2 (ENSAMEG00000017305) #15	MUS81 (ENSAMEG00000017315) #16	CFL1 (ENSAMEG00000017334) ##17	SNX32 (ENSAMEG00000017338) #18	OVOL1 (ENSAMEG00000025661) #19	AP5B1 (ENSAMEG00000031118)	RNASEH2C (ENSAMEG00000017348) #20	KAT5 (ENSAMEG00000017350) #21	RELA (ENSAMEG00000017369) #22	SIPA1 (ENSAMEG00000017381) #23	PCNX3 (ENSAMEG00000017410) #24	MAP3K11 (ENSAMEG00000017429) #25	KCNK7 (ENSAMEG00000017431) #26	EHBP1L1 (ENSAMEG00000017440) #27	FAM89B (ENSAMEG00000017467)	ZNRD2 (ENSAMEG00000017470) #29	LTBP3 (ENSAMEG00000017473) #30	SCYL1 (ENSAMEG00000017513) #31	FRMD8 (ENSAMEG00000017530) #33	SLC25A45 (ENSAMEG00000024074) #34	TIGD3 (ENSAMEG00000027061) #35	DPF2 (ENSAMEG00000017545) #36	CDC42EP2 (ENSAMEG00000019280) #37	POLA2 (ENSAMEG00000017565)
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00390000013169 #29	ENSGT00940000153370.a.a	ENSGT00940000160285.r #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Ferret	MODERN SPECIES	314	DRAP1 (ENSMPUG00000011429) #11	C11orf68 (ENSMPUG00000019981)	FOSL1 (ENSMPUG00000011433) #12	CCDC85B (ENSMPUG00000019984)	FIBP (ENSMPUG00000011444) #13	CTSW (ENSMPUG00000011435) #14	EFEMP2 (ENSMPUG00000011497) #15	MUS81 (ENSMPUG00000011492) #16	ENSMPUG00000011502 #17	SNX32 (ENSMPUG00000011514) #18	ENSMPUG00000019986	OVOL1 (ENSMPUG00000011594) #19	AP5B1 (ENSMPUG00000011617)	KAT5 (ENSMPUG00000011620) #21	RNASEH2C (ENSMPUG00000011629) #20	RELA (ENSMPUG00000011637) #22	SIPA1 (ENSMPUG00000011646) #23	PCNX3 (ENSMPUG00000011655) #24	MAP3K11 (ENSMPUG00000011832) #25	KCNK7 (ENSMPUG00000011843) #26	EHBP1L1 (ENSMPUG00000011848) #27	ZNRD2 (ENSMPUG00000011934) #29	LTBP3 (ENSMPUG00000011943) #30	SCYL1 (ENSMPUG00000011957) #31	FRMD8 (ENSMPUG00000011965) #33	ENSMPUG00000011975	SLC25A45 (ENSMPUG00000011980) #34	TIGD3 (ENSMPUG00000019988) #35	DPF2 (ENSMPUG00000011987) #36	CDC42EP2 (ENSMPUG00000019990) #37	POLA2 (ENSMPUG00000011998)
American mink	MODERN SPECIES	104	TSGA10IP (ENSNVIG00000015229) #10	DRAP1 (ENSNVIG00000015240) #11	C11orf68 (ENSNVIG00000015263)	FOSL1 (ENSNVIG00000015287) #12	CCDC85B (ENSNVIG00000015331)	FIBP (ENSNVIG00000015339) #13	ENSNVIG00000015372 #14	FBLN4 (ENSNVIG00000015387) #15	MUS81 (ENSNVIG00000015400) #16	ENSNVIG00000015451 ##17	SNX32 (ENSNVIG00000015520) #18	OVOL1 (ENSNVIG00000015549) #19	AP5B1 (ENSNVIG00000015570)	RNASEH2C (ENSNVIG00000015582) #20	KAT5 (ENSNVIG00000015594) #21	RELA (ENSNVIG00000015668) #22	SIPA1 (ENSNVIG00000015731) #23	PCNX3 (ENSNVIG00000015846) #24	MAP3K11 (ENSNVIG00000015920) #25	KCNK7 (ENSNVIG00000015955) #26	EHBP1L1 (ENSNVIG00000015995) #27	ZNRD2 (ENSNVIG00000016175) #29	FAM89B (ENSNVIG00000016197)	LTBP3 (ENSNVIG00000016223) #30	SCYL1 (ENSNVIG00000016366) #31	FRMD8 (ENSNVIG00000016644) #33	SLC25A45 (ENSNVIG00000016662) #34	TIGD3 (ENSNVIG00000016755) #35	DPF2 (ENSNVIG00000016764) #36	CDC42EP2 (ENSNVIG00000016825) #37	ENSNVIG00000016834
Canidae	ANCESTRAL SPECIES	13	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT01100000263569.a.a.f.b	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Dog	MODERN SPECIES	9	DRAP1 (ENSCAFG00845017183) #11	C11orf68 (ENSCAFG00845017346)	FOSL1 (ENSCAFG00845017398) #12	CCDC85B (ENSCAFG00845017470)	FIBP (ENSCAFG00845017518) #13	CTSW (ENSCAFG00845017646) #14	EFEMP2 (ENSCAFG00845017770) #15	MUS81 (ENSCAFG00845017866) #16	CFL1 (ENSCAFG00845018065) #17	SNX32 (ENSCAFG00845018197) #18	OVOL1 (ENSCAFG00845018369) #19	AP5B1 (ENSCAFG00845018412)	ENSCAFG00845018441	RNASEH2C (ENSCAFG00845018465) #20	KAT5 (ENSCAFG00845018593) #21	RELA (ENSCAFG00845019016) #22	SIPA1 (ENSCAFG00845019235) #23	PCNX3 (ENSCAFG00845019463) #24	MAP3K11 (ENSCAFG00845020324) #25	KCNK7 (ENSCAFG00845020560) #26	EHBP1L1 (ENSCAFG00845020691) #27	FAM89B (ENSCAFG00845021082)	ZNRD2 (ENSCAFG00845021112) #29	LTBP3 (ENSCAFG00845021529) #30	SCYL1 (ENSCAFG00845023673) #31	ENSCAFG00845024097	FRMD8 (ENSCAFG00845024158) #33	SLC25A45 (ENSCAFG00845024512) #34	TIGD3 (ENSCAFG00845024649) #35	DPF2 (ENSCAFG00845024732) #36	CDC42EP2 (ENSCAFG00845024969) #37
Dingo	MODERN SPECIES	36	DRAP1 (ENSCAFG00020015323) #11	C11orf68 (ENSCAFG00020015319)	FOSL1 (ENSCAFG00020015306) #12	CCDC85B (ENSCAFG00020015303)	FIBP (ENSCAFG00020015301) #13	CTSW (ENSCAFG00020015299) #14	EFEMP2 (ENSCAFG00020015294) #15	MUS81 (ENSCAFG00020015150) #16	ENSCAFG00020015102 #17	SNX32 (ENSCAFG00020015089) #18	OVOL1 (ENSCAFG00020015084) #19	AP5B1 (ENSCAFG00020015080)	ENSCAFG00020015079	RNASEH2C (ENSCAFG00020015077) #20	KAT5 (ENSCAFG00020015072) #21	RELA (ENSCAFG00020015070) #22	SIPA1 (ENSCAFG00020015063) #23	PCNX3 (ENSCAFG00020015056) #24	MAP3K11 (ENSCAFG00020015052) #25	KCNK7 (ENSCAFG00020015049) #26	ENSCAFG00020015041 #27	FAM89B (ENSCAFG00020015036)	ZNRD2 (ENSCAFG00020015028) #29	LTBP3 (ENSCAFG00020015003) #30	SCYL1 (ENSCAFG00020014997) #31	ENSCAFG00020014991	FRMD8 (ENSCAFG00020014981) #33	SLC25A45 (ENSCAFG00020014978) #34	TIGD3 (ENSCAFG00020014976) #35	DPF2 (ENSCAFG00020014969) #36	CDC42EP2 (ENSCAFG00020014968) #37
Red fox	MODERN SPECIES	49	TSGA10IP (ENSVVUG00000027044) #10	ENSVVUG00000027046	C11orf68 (ENSVVUG00000027047)	DRAP1 (ENSVVUG00000027049) #11	FOSL1 (ENSVVUG00000027052) #12	FIBP (ENSVVUG00000027057) #13	ENSVVUG00000027060	EFEMP2 (ENSVVUG00000027062) #15	MUS81 (ENSVVUG00000027065) #16	ENSVVUG00000027067 #17	SNX32 (ENSVVUG00000027071) #18	OVOL1 (ENSVVUG00000027073) #19	AP5B1 (ENSVVUG00000027075)	RNASEH2C (ENSVVUG00000027076) #20	KAT5 (ENSVVUG00000027078) #21	RELA (ENSVVUG00000027081) #22	SIPA1 (ENSVVUG00000027085) #23	PCNX3 (ENSVVUG00000027093) #24	MAP3K11 (ENSVVUG00000027094) #25	KCNK7 (ENSVVUG00000027096) #26	EHBP1L1 (ENSVVUG00000027098) #27	ZNRD2 (ENSVVUG00000027133) #29	FAM89B (ENSVVUG00000027134)	LTBP3 (ENSVVUG00000027139) #30	SCYL1 (ENSVVUG00000027157) #31	FRMD8 (ENSVVUG00000027168) #33	SLC25A45 (ENSVVUG00000027174) #34	TIGD3 (ENSVVUG00000027179) #35	DPF2 (ENSVVUG00000027189) #36	CDC42EP2 (ENSVVUG00000027323) #37	POLA2 (ENSVVUG00000027328)
Felidae	ANCESTRAL SPECIES		ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00940000165817	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36
Cat	MODERN SPECIES	241	ENSFCAG00000053770	DRAP1 (ENSFCAG00000027028) #11	CD1H11orf68 (ENSFCAG00000013276)	FOSL1 (ENSFCAG00000037701) #12	CCDC85B (ENSFCAG00000045312)	FIBP (ENSFCAG00000005578) #13	CTSW (ENSFCAG00000005572) #14	EFEMP2 (ENSFCAG00000013274) #15	MUS81 (ENSFCAG00000013273) #16	CFL1 (ENSFCAG00000013272) ##17	SNX32 (ENSFCAG00000013271) #18	OVOL1 (ENSFCAG00000007902) #19	AP5B1 (ENSFCAG00000026295)	RNASEH2C (ENSFCAG00000044095) #20	KAT5 (ENSFCAG00000000038)	RELA (ENSFCAG00000005696) #22	SIPA1 (ENSFCAG00000018585) #23	PCNX3 (ENSFCAG00000005693) #24	MAP3K11 (ENSFCAG00000005689) #25	KCNK7 (ENSFCAG00000005688) #26	EHBP1L1 (ENSFCAG00000005687) #27	FAM89B (ENSFCAG00000040439)	ZNRD2 (ENSFCAG00000005682) #29	LTBP3 (ENSFCAG00000044329) #30	SCYL1 (ENSFCAG00000010836) #31	ENSFCAG00000053095	ENSFCAG00000052903	FRMD8 (ENSFCAG00000001443) #33	SLC25A45 (ENSFCAG00000034268) #34	TIGD3 (ENSFCAG00000025695) #35	DPF2 (ENSFCAG00000023858) #36
Panthera	ANCESTRAL SPECIES	18	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00410000028887 #32	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37
Tiger	MODERN SPECIES	369	ENSPTIG00000017000	BANF1 (ENSPTIG00000017296) #7	EIF1AD (ENSPTIG00000017618) #8	SART1 (ENSPTIG00000017833) #9	TSGA10IP (ENSPTIG00000020062) #10	DRAP1 (ENSPTIG00000020449) #11	C11orf68 (ENSPTIG00000020788)	FOSL1 (ENSPTIG00000020951) #12	FIBP (ENSPTIG00000021098) #13	EFEMP2 (ENSPTIG00000006487) #15	MUS81 (ENSPTIG00000007837) #16	ENSPTIG00000009456 ##17	OVOL1 (ENSPTIG00000011583) #19	RNASEH2C (ENSPTIG00000011677) #20	KAT5 (ENSPTIG00000012360) #21	RELA (ENSPTIG00000013258) #22	SIPA1 (ENSPTIG00000014824) #23	PCNX3 (ENSPTIG00000015412) #24	MAP3K11 (ENSPTIG00000017374) #25	KCNK7 (ENSPTIG00000019827) #26	EHBP1L1 (ENSPTIG00000020296) #27	ENSPTIG00000004488	ZNRD2 (ENSPTIG00000005359) #29	SCYL1 (ENSPTIG00000009590) #31	ENSPTIG00000010803 #32	FRMD8 (ENSPTIG00000011337) #33	SLC25A45 (ENSPTIG00000012769) #34	DPF2 (ENSPTIG00000013904) #36	CDC42EP2 (ENSPTIG00000004682) #37	POLA2 (ENSPTIG00000014906)	ENSPTIG00000016844
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
lion	MODERN SPECIES	10	TSGA10IP (ENSPLOG00000007255) #10	DRAP1 (ENSPLOG00000007213) #11	C11orf68 (ENSPLOG00000007176)	FOSL1 (ENSPLOG00000007120) #12	CCDC85B (ENSPLOG00000007086)	FIBP (ENSPLOG00000007065) #13	CTSW (ENSPLOG00000006963) #14	EFEMP2 (ENSPLOG00000006918) #15	MUS81 (ENSPLOG00000006876) #16	ENSPLOG00000006839 ##17	SNX32 (ENSPLOG00000006778) #18	OVOL1 (ENSPLOG00000006738) #19	AP5B1 (ENSPLOG00000006722)	RNASEH2C (ENSPLOG00000006698) #20	ENSPLOG00000006480	RELA (ENSPLOG00000006157) #22	SIPA1 (ENSPLOG00000006033) #23	PCNX3 (ENSPLOG00000005879) #24	MAP3K11 (ENSPLOG00000005789) #25	KCNK7 (ENSPLOG00000005744) #26	EHBP1L1 (ENSPLOG00000005547) #27	FAM89B (ENSPLOG00000005415)	ZNRD2 (ENSPLOG00000005379) #29	LTBP3 (ENSPLOG00000005272) #30	SCYL1 (ENSPLOG00000005190) #31	ENSPLOG00000005160	FRMD8 (ENSPLOG00000005073) #33	SLC25A45 (ENSPLOG00000004939) #34	DPF2 (ENSPLOG00000019479) #36	CDC42EP2 (ENSPLOG00000019423) #37	POLA2 (ENSPLOG00000019384)
leopard	DUPLICATION
leopard	MODERN SPECIES	64	TSGA10IP (ENSPPRG00000016839) #10	DRAP1 (ENSPPRG00000016996) #11	C11orf68 (ENSPPRG00000021719)	FOSL1 (ENSPPRG00000021689) #12	CCDC85B (ENSPPRG00000021765)	FIBP (ENSPPRG00000024062) #13	CTSW (ENSPPRG00000024015) #14	EFEMP2 (ENSPPRG00000023869) #15	MUS81 (ENSPPRG00000023684) #16	ENSPPRG00000023523 ##17	SNX32 (ENSPPRG00000022883) #18	OVOL1 (ENSPPRG00000000620) #19	AP5B1 (ENSPPRG00000000658)	RNASEH2C (ENSPPRG00000000774) #20	KAT5 (ENSPPRG00000002162) #21	ENSPPRG00000002251 #22	ENSPPRG00000003615 #22	SIPA1 (ENSPPRG00000004072) #23	PCNX3 (ENSPPRG00000004512) #24	ENSPPRG00000006016	KCNK7 (ENSPPRG00000006227) #26	EHBP1L1 (ENSPPRG00000007250) #27	FAM89B (ENSPPRG00000007530)	ZNRD2 (ENSPPRG00000007821) #29	LTBP3 (ENSPPRG00000009532) #30	SCYL1 (ENSPPRG00000011639) #31	FRMD8 (ENSPPRG00000012764) #33	SLC25A45 (ENSPPRG00000013551) #34	TIGD3 (ENSPPRG00000022171) #35	DPF2 (ENSPPRG00000014643) #36	CDC42EP2 (ENSPPRG00000022231) #37
leopard	MODERN SPECIES	64	DRAP1 (ENSPPRG00000016996) #11	C11orf68 (ENSPPRG00000021719)	FOSL1 (ENSPPRG00000021689) #12	CCDC85B (ENSPPRG00000021765)	FIBP (ENSPPRG00000024062) #13	CTSW (ENSPPRG00000024015) #14	EFEMP2 (ENSPPRG00000023869) #15	MUS81 (ENSPPRG00000023684) #16	ENSPPRG00000023523 ##17	SNX32 (ENSPPRG00000022883) #18	OVOL1 (ENSPPRG00000000620) #19	AP5B1 (ENSPPRG00000000658)	RNASEH2C (ENSPPRG00000000774) #20	KAT5 (ENSPPRG00000002162) #21	ENSPPRG00000002251 #22	ENSPPRG00000003615 #22	SIPA1 (ENSPPRG00000004072) #23	PCNX3 (ENSPPRG00000004512) #24	ENSPPRG00000006016	KCNK7 (ENSPPRG00000006227) #26	EHBP1L1 (ENSPPRG00000007250) #27	FAM89B (ENSPPRG00000007530)	ZNRD2 (ENSPPRG00000007821) #29	LTBP3 (ENSPPRG00000009532) #30	SCYL1 (ENSPPRG00000011639) #31	FRMD8 (ENSPPRG00000012764) #33	SLC25A45 (ENSPPRG00000013551) #34	TIGD3 (ENSPPRG00000022171) #35	DPF2 (ENSPPRG00000014643) #36	CDC42EP2 (ENSPPRG00000022231) #37	POLA2 (ENSPPRG00000015187)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Equus	ANCESTRAL SPECIES	11	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Donkey	MODERN SPECIES	21	TSGA10IP (ENSEASG00005004454) #10	ENSEASG00005034227 #11	C11orf68 (ENSEASG00005034146)	CCDC85B (ENSEASG00005026485)	FOSL1 (ENSEASG00005004428) #12	FIBP (ENSEASG00005004419) #13	CTSW (ENSEASG00005004414) #14	EFEMP2 (ENSEASG00005004406) #15	MUS81 (ENSEASG00005004347) #16	ENSEASG00005004340 #17	SNX32 (ENSEASG00005004329) #18	OVOL1 (ENSEASG00005004316) #19	AP5B1 (ENSEASG00005004309)	RNASEH2C (ENSEASG00005025414) #20	KAT5 (ENSEASG00005004292) #21	RELA (ENSEASG00005004279) #22	SIPA1 (ENSEASG00005004004) #23	PCNX3 (ENSEASG00005003989) #24	MAP3K11 (ENSEASG00005003984) #25	KCNK7 (ENSEASG00005003983) #26	EHBP1L1 (ENSEASG00005003867) #27	FAM89B (ENSEASG00005025071)	ZNRD2 (ENSEASG00005034190) #29	LTBP3 (ENSEASG00005003828) #30	SCYL1 (ENSEASG00005003634) #31	FRMD8 (ENSEASG00005017940) #33	SLC25A45 (ENSEASG00005017943) #34	TIGD3 (ENSEASG00005017947) #35	DPF2 (ENSEASG00005017960) #36	CDC42EP2 (ENSEASG00005026121) #37	POLA2 (ENSEASG00005018030)
Horse	MODERN SPECIES	3	TSGA10IP (ENSECAG00000023491) #10	DRAP1 (ENSECAG00000023373) #11	C11orf68 (ENSECAG00000039276)	FOSL1 (ENSECAG00000023092) #12	CCDC85B (ENSECAG00000031061)	CTSW (ENSECAG00000021710) #14	FIBP (ENSECAG00000022559) #13	EFEMP2 (ENSECAG00000021047) #15	MUS81 (ENSECAG00000019967) #16	CFL1 (ENSECAG00000019900) #17	SNX32 (ENSECAG00000017402) #18	OVOL1 (ENSECAG00000017302) #19	AP5B1 (ENSECAG00000035192)	KAT5 (ENSECAG00000014996) #21	RNASEH2C (ENSECAG00000017289) #20	RELA (ENSECAG00000013763) #22	PCNX3 (ENSECAG00000011363) #24	MAP3K11 (ENSECAG00000010694) #25	KCNK7 (ENSECAG00000010585) #26	EHBP1L1 (ENSECAG00000032064) #27	ZNRD2 (ENSECAG00000010257)	LTBP3 (ENSECAG00000009629) #30	SCYL1 (ENSECAG00000007600) #31	FRMD8 (ENSECAG00000007115) #33	SLC25A45 (ENSECAG00000006906) #34	DPF2 (ENSECAG00000001650) #35	CDC42EP2 (ENSECAG00000006867) #37	POLA2 (ENSECAG00000024194)	ENSECAG00000023574	CAPN1 (ENSECAG00000022942)	ENSECAG00000031458
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.i.a.a.a #17	ENSGT00950000183000.c.a.a.i.a.a.b.b ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00390000013169 #29	ENSGT00940000153370.a.a	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Greater horseshoe bat	MODERN SPECIES	2	SART1 (ENSRFEG00010002947) #9	TSGA10IP (ENSRFEG00010003037) #10	DRAP1 (ENSRFEG00010003097) #11	C11orf68 (ENSRFEG00010003130)	FOSL1 (ENSRFEG00010003153) #12	CCDC85B (ENSRFEG00010003173)	FIBP (ENSRFEG00010003198) #13	CTSW (ENSRFEG00010003261) #14	EFEMP2 (ENSRFEG00010003338) #15	MUS81 (ENSRFEG00010003381) #16	CFL1 (ENSRFEG00010003410) ##17	OVOL1 (ENSRFEG00010003451) #19	AP5B1 (ENSRFEG00010003472)	RNASEH2C (ENSRFEG00010003492) #20	KAT5 (ENSRFEG00010003577) #21	RELA (ENSRFEG00010003738) #22	SIPA1 (ENSRFEG00010003819) #23	PCNX3 (ENSRFEG00010003912) #24	MAP3K11 (ENSRFEG00010004042) #25	KCNK7 (ENSRFEG00010004115) #26	EHBP1L1 (ENSRFEG00010004148) #27	ZNRD2 (ENSRFEG00010004187) #29	FAM89B (ENSRFEG00010004196)	LTBP3 (ENSRFEG00010004223) #30	SCYL1 (ENSRFEG00010004328) #31	FRMD8 (ENSRFEG00010004395) #33	SLC25A45 (ENSRFEG00010004466) #34	TIGD3 (ENSRFEG00010004495) #35	DPF2 (ENSRFEG00010004526) #36	CDC42EP2 (ENSRFEG00010004560) #37	POLA2 (ENSRFEG00010004580)
Microbat	MODERN SPECIES	1310	ENSMLUG00000024920 #7	EIF1AD (ENSMLUG00000011116) #8	SART1 (ENSMLUG00000011078) #9	TSGA10IP (ENSMLUG00000011991) #10	DRAP1 (ENSMLUG00000011070) #11	C11orf68 (ENSMLUG00000011061)	FOSL1 (ENSMLUG00000011050) #12	FIBP (ENSMLUG00000011006) #13	CTSW (ENSMLUG00000010983) #14	EFEMP2 (ENSMLUG00000003554) #15	MUS81 (ENSMLUG00000010949) #16	ENSMLUG00000024685 #17	OVOL1 (ENSMLUG00000008789) #19	RNASEH2C (ENSMLUG00000008777) #20	KAT5 (ENSMLUG00000008754) #21	RELA (ENSMLUG00000008727) #22	SIPA1 (ENSMLUG00000028974) #23	PCNX3 (ENSMLUG00000008698) #24	MAP3K11 (ENSMLUG00000008611) #25	KCNK7 (ENSMLUG00000008604) #26	ENSMLUG00000008550 #27	ZNRD2 (ENSMLUG00000030736) #29	LTBP3 (ENSMLUG00000008510) #30	SCYL1 (ENSMLUG00000008477) #31	AP5B1 (ENSMLUG00000023619)
Megabat	MODERN SPECIES	1010																RELA (ENSPVAG00000009983) #22	SIPA1 (ENSPVAG00000009982) #23	ENSPVAG00000009981	ENSPVAG00000009980 #24	MAP3K11 (ENSPVAG00000009979) #25	KCNK7 (ENSPVAG00000009978) #26	EHBP1L1 (ENSPVAG00000009977) #27	FAM89B (ENSPVAG00000009976)	ZNRD2 (ENSPVAG00000009975) #29	LTBP3 (ENSPVAG00000009973) #30	SCYL1 (ENSPVAG00000009972) #31
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000007071 #9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Elephant	MODERN SPECIES	532	SART1 (ENSLAFG00000001768) #9	TSGA10IP (ENSLAFG00000001767) #10	DRAP1 (ENSLAFG00000009361) #11	C11orf68 (ENSLAFG00000009360)	FOSL1 (ENSLAFG00000001766) #12	CCDC85B (ENSLAFG00000001765)	FIBP (ENSLAFG00000001763) #13	CTSW (ENSLAFG00000001761) #14	EFEMP2 (ENSLAFG00000031990) #15	MUS81 (ENSLAFG00000032561) #16	CFL1 (ENSLAFG00000021419) ##17	OVOL1 (ENSLAFG00000015644) #19	AP5B1 (ENSLAFG00000027591)	RNASEH2C (ENSLAFG00000015641) #20	KAT5 (ENSLAFG00000015634) #21	RELA (ENSLAFG00000021967) #22	MAP3K11 (ENSLAFG00000000758) #25	SIPA1 (ENSLAFG00000020734) #23	PCNX3 (ENSLAFG00000011519) #24	KCNK7 (ENSLAFG00000026696) #26	ENSLAFG00000013754 #27	FAM89B (ENSLAFG00000010813)	ZNRD2 (ENSLAFG00000029356) #29	LTBP3 (ENSLAFG00000023260) #30	SCYL1 (ENSLAFG00000027739) #31	ENSLAFG00000029795	FRMD8 (ENSLAFG00000029920) #33	SLC25A45 (ENSLAFG00000006845) #34	TIGD3 (ENSLAFG00000032647) #35	DPF2 (ENSLAFG00000016450) #36	CDC42EP2 (ENSLAFG00000016448) #37
Hyrax	MODERN SPECIES	5671																ENSPCAG00000004715 #22	SIPA1 (ENSPCAG00000004668) #23	ENSPCAG00000004555 #24	MAP3K11 (ENSPCAG00000004476) #25	KCNK7 (ENSPCAG00000004439) #26	ENSPCAG00000004333 #27	ENSPCAG00000004301	ZNRD2 (ENSPCAG00000004263) #29
Xenarthra	ANCESTRAL SPECIES	7	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a.j ##17	ENSGT00940000162773 #18	ENSGT00690000102782	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000163054	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147
Armadillo	MODERN SPECIES	3881	DRAP1 (ENSDNOG00000035539) #11	C11orf68 (ENSDNOG00000045982)	FOSL1 (ENSDNOG00000003173) #12	CCDC85B (ENSDNOG00000030701)	FIBP (ENSDNOG00000000415) #13	CTSW (ENSDNOG00000032974) #14	EFEMP2 (ENSDNOG00000041767) #15	MUS81 (ENSDNOG00000043903) #16	CFL1 (ENSDNOG00000032661) ##17	SNX32 (ENSDNOG00000004484) #18	ENSDNOG00000036096	OVOL1 (ENSDNOG00000024062) #19	AP5B1 (ENSDNOG00000049510)	RNASEH2C (ENSDNOG00000035155) #20	ENSDNOG00000024634	RELA (ENSDNOG00000039743) #22	SIPA1 (ENSDNOG00000025969) #23	PCNX3 (ENSDNOG00000048688) #24	MAP3K11 (ENSDNOG00000044318) #25	KCNK7 (ENSDNOG00000024241) #26	EHBP1L1 (ENSDNOG00000034714) #27	ZNRD2 (ENSDNOG00000037038) #29	LTBP3 (ENSDNOG00000048091) #30	SCYL1 (ENSDNOG00000001666) #31	FRMD8 (ENSDNOG00000025075) #33	SLC25A45 (ENSDNOG00000047325) #34	TIGD3 (ENSDNOG00000004634) #35	DPF2 (ENSDNOG00000042153) #36	CDC42EP2 (ENSDNOG00000007296) #37	POLA2 (ENSDNOG00000006526)	CAPN1 (ENSDNOG00000037468)
Sloth	MODERN SPECIES	7849																ENSCHOG00000004207 #22
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Opossum	MODERN SPECIES	7	ENSMODG00000028390	ENSMODG00000008964 #8	ENSMODG00000008954 #7	CCDC85B (ENSMODG00000009074)	FIBP (ENSMODG00000009121) #13	ENSMODG00000009132 #14	EFEMP2 (ENSMODG00000009146) #15	MUS81 (ENSMODG00000009160) #16	SNX32 (ENSMODG00000009189) #18	ENSMODG00000028811	ENSMODG00000037353	OVOL1 (ENSMODG00000036817) #19	ENSMODG00000009547 #20	AP5B1 (ENSMODG00000009541)	KAT5 (ENSMODG00000009581) #21	RELA (ENSMODG00000009603) #22	PCNX3 (ENSMODG00000009626) #24	MAP3K11 (ENSMODG00000009647) #25	ENSMODG00000009659 #27	ZNRD2 (ENSMODG00000009665) #29	LTBP3 (ENSMODG00000009717) #30	ENSMODG00000009751 #31	ENSMODG00000042597 #31	FRMD8 (ENSMODG00000009777) #33	ENSMODG00000009794 #36	CDC42EP2 (ENSMODG00000024084) #37	POLA2 (ENSMODG00000009836)	ENSMODG00000009949	ENSMODG00000009885	ENSMODG00000010045	ENSMODG00000010068
Marsupialia_b	DUPLICATION
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000159867.e #22
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000159867.e #22
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00940000159867.e #22
koala	MODERN SPECIES	45													ENSPCIG00000011938	PCDH9 (ENSPCIG00000029580)	ENSPCIG00000029577	ENSPCIG00000019472 #22	ENSPCIG00000035810	ENSPCIG00000031693	ENSPCIG00000016333	KLHL1 (ENSPCIG00000012153)	DACH1 (ENSPCIG00000006650)	MZT1 (ENSPCIG00000018451)	ENSPCIG00000034725	DIS3 (ENSPCIG00000018448)	PIBF1 (ENSPCIG00000028734)	KLF5 (ENSPCIG00000028733)	KLF12 (ENSPCIG00000025121)	TBC1D4 (ENSPCIG00000028878)	ENSPCIG00000004116	ENSPCIG00000033922	ENSPCIG00000027692
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867.f #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Diprotodontia	ANCESTRAL SPECIES	27	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867.f #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00940000153370.a.a	ENSGT00390000013169 #29	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00390000008351 #10	ENSGT00390000012424.a #11	ENSGT00390000011640	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000161630 #14	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162773 #18	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00390000001568 #20	ENSGT00940000162343 #21	ENSGT00940000159867.f #22	ENSGT00940000160644 #23	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000161992 #26	ENSGT00940000161027 #27	ENSGT00390000013169 #29	ENSGT00940000153370.a.a	ENSGT00940000160285 #30	ENSGT00930000151054 #31	ENSGT00530000063721.B #33	ENSGT00940000161002 #34	ENSGT00940000162651 #35	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784
Common wonbat	MODERN SPECIES	714	SART1 (ENSVURG00010001215) #9	DRAP1 (ENSVURG00010001269) #11	C11orf68 (ENSVURG00010001305)	FOSL1 (ENSVURG00010001319) #12	CCDC85B (ENSVURG00010001328)	FIBP (ENSVURG00010001348) #13	ENSVURG00010001377 #14	EFEMP2 (ENSVURG00010001394) #15	MUS81 (ENSVURG00010001431) #16	CFL1 (ENSVURG00010001463) #17	SNX32 (ENSVURG00010001488) #18	OVOL1 (ENSVURG00010001528) #19	AP5B1 (ENSVURG00010001540)	ENSVURG00010001553 #20	KAT5 (ENSVURG00010001567) #21	RELA (ENSVURG00010001608) #22	SIPA1 (ENSVURG00010001631) #23	PCNX3 (ENSVURG00010001666) #24	MAP3K11 (ENSVURG00010001707) #25	ENSVURG00010001725 #26	ENSVURG00010001738 #27	ZNRD2 (ENSVURG00010001753) #29	FAM89B (ENSVURG00010001764)	LTBP3 (ENSVURG00010001786) #30	SCYL1 (ENSVURG00010001874) #31	FRMD8 (ENSVURG00010001898) #33	SLC25A45 (ENSVURG00010001921) #34	TIGD3 (ENSVURG00010002040) #35	ENSVURG00010002049 #36	CDC42EP2 (ENSVURG00010002071) #37	POLA2 (ENSVURG00010002080)
koala	MODERN SPECIES	179	SART1 (ENSPCIG00000008311) #9	ENSPCIG00000008304 #10	DRAP1 (ENSPCIG00000032858) #11	C11orf68 (ENSPCIG00000008297)	FOSL1 (ENSPCIG00000008251) #12	CCDC85B (ENSPCIG00000008248)	FIBP (ENSPCIG00000008242) #13	ENSPCIG00000008235 #14	EFEMP2 (ENSPCIG00000008226) #15	MUS81 (ENSPCIG00000008219) #16	CFL1 (ENSPCIG00000008214) #17	SNX32 (ENSPCIG00000008211) #18	OVOL1 (ENSPCIG00000035892) #19	AP5B1 (ENSPCIG00000014340)	KAT5 (ENSPCIG00000014346) #21	RELA (ENSPCIG00000014350) #22	SIPA1 (ENSPCIG00000000502) #23	PCNX3 (ENSPCIG00000011684) #24	MAP3K11 (ENSPCIG00000011679) #25	KCNK7 (ENSPCIG00000011674) #26	ENSPCIG00000011667 #27	ZNRD2 (ENSPCIG00000011664) #29	ENSPCIG00000035741 #30	ENSPCIG00000037397 #30	SCYL1 (ENSPCIG00000011652) #31	FRMD8 (ENSPCIG00000035106) #33	ENSPCIG00000029215 #34	TIGD3 (ENSPCIG00000029216) #35	DPF2 (ENSPCIG00000029217) #36	CDC42EP2 (ENSPCIG00000029218) #37	POLA2 (ENSPCIG00000029219)
Wallaby	MODERN SPECIES	14555																RELA (ENSMEUG00000005955) #22
Tasmanian devil	MODERN SPECIES	5	EIF1AD (ENSSHAG00000030559) #8	SART1 (ENSSHAG00000011437) #9	ENSSHAG00000011571 #10	ENSSHAG00000027654	FOSL1 (ENSSHAG00000030860) #12	CCDC85B (ENSSHAG00000021943)	FIBP (ENSSHAG00000001895) #13	ENSSHAG00000024764 #14	EFEMP2 (ENSSHAG00000026784) #15	ENSSHAG00000023433	CFL1 (ENSSHAG00000028823) #17	SNX32 (ENSSHAG00000027022) #18	OVOL1 (ENSSHAG00000003924) #19	ENSSHAG00000024188	KAT5 (ENSSHAG00000001928) #21	RELA (ENSSHAG00000023775) #22	PCNX3 (ENSSHAG00000003447) #24	MAP3K11 (ENSSHAG00000003972) #25	ENSSHAG00000028872 #26	ENSSHAG00000024021 #27	ZNRD2 (ENSSHAG00000025225) #29	ENSSHAG00000028934 #30	ENSSHAG00000006404 #30	SCYL1 (ENSSHAG00000006240) #31	ENSSHAG00000021118 #33	SLC25A45 (ENSSHAG00000003643) #34	TIGD3 (ENSSHAG00000022468) #35	ENSSHAG00000024817 #36	CDC42EP2 (ENSSHAG00000021980) #37	POLA2 (ENSSHAG00000000361)	ENSSHAG00000005823
Platypus	MODERN SPECIES	14	ENSOANG00000005527 #14	ENSOANG00000022465 #14	FIBP (ENSOANG00000036560) #13	ENSOANG00000003404 #14	ENSOANG00000048423 #14	ENSOANG00000038246 #14	EFEMP2 (ENSOANG00000043060) #15	MUS81 (ENSOANG00000014814) #16	ENSOANG00000036037	CFL1 (ENSOANG00000040834) #17	SNX32 (ENSOANG00000043910) #18	OVOL1 (ENSOANG00000044013) #19	AP5B1 (ENSOANG00000044279)	ENSOANG00000043139 #20	KAT5 (ENSOANG00000039277) #21	RELA (ENSOANG00000004820) #22	SIPA1 (ENSOANG00000031232) #23	PCNX3 (ENSOANG00000008241) #24	MAP3K11 (ENSOANG00000044775) #25	KCNK7 (ENSOANG00000007606) #26	ENSOANG00000051028 #27	FAM89B (ENSOANG00000040325)	ZNRD2 (ENSOANG00000036411) #29	ENSOANG00000004147 #30	SCYL1 (ENSOANG00000013084) #31	FRMD8 (ENSOANG00000010526) #33	SLC25A45 (ENSOANG00000047426) #34	TIGD3 (ENSOANG00000049052) #35	DPF2 (ENSOANG00000002079) #36	CDC42EP2 (ENSOANG00000049809) #37	POLA2 (ENSOANG00000014222)
Sauria	ANCESTRAL SPECIES	103													ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11
Lepidosauria	ANCESTRAL SPECIES	87	ENSGT00940000162438	ENSGT00390000016784	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000163054.b	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232	ENSGT00940000161630 #14	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405	ENSGT00390000000610	ENSGT00940000161779
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1242	ENSSPUG00000009100	ARHGAP30 (ENSSPUG00000009090)	USF1 (ENSSPUG00000009059)	TSTD1 (ENSSPUG00000009030)	F11R (ENSSPUG00000008978)	ITLN1 (ENSSPUG00000008959)	KCNJ10 (ENSSPUG00000008948)	KCNJ9 (ENSSPUG00000008937)	IGSF8 (ENSSPUG00000008852)	ATP1A2 (ENSSPUG00000008768)	CASQ1 (ENSSPUG00000008752)	ENSSPUG00000008738	ENSSPUG00000008724	PEX19 (ENSSPUG00000008704)	ENSSPUG00000008692 #22	ENSSPUG00000008683 #22	DRAP1 (ENSSPUG00000008663) #11	ENSSPUG00000008632	ENSSPUG00000008620	ENSSPUG00000008615	DPP3 (ENSSPUG00000008593)	BBS1 (ENSSPUG00000008555)	ENSSPUG00000008541	FOSL1 (ENSSPUG00000008529) #12	ENSSPUG00000008516	FIBP (ENSSPUG00000008343) #13	EFEMP2 (ENSSPUG00000008270) #15	MUS81 (ENSSPUG00000008181) #16	ENSSPUG00000008152 #16	CFL1 (ENSSPUG00000008139) #17	CD248 (ENSSPUG00000008131)
tuatara	MODERN SPECIES	1242	NECTIN4 (ENSSPUG00000009112)	ENSSPUG00000009100	ARHGAP30 (ENSSPUG00000009090)	USF1 (ENSSPUG00000009059)	TSTD1 (ENSSPUG00000009030)	F11R (ENSSPUG00000008978)	ITLN1 (ENSSPUG00000008959)	KCNJ10 (ENSSPUG00000008948)	KCNJ9 (ENSSPUG00000008937)	IGSF8 (ENSSPUG00000008852)	ATP1A2 (ENSSPUG00000008768)	CASQ1 (ENSSPUG00000008752)	ENSSPUG00000008738	ENSSPUG00000008724	PEX19 (ENSSPUG00000008704)	ENSSPUG00000008692 #22	ENSSPUG00000008683 #22	DRAP1 (ENSSPUG00000008663) #11	ENSSPUG00000008632	ENSSPUG00000008620	ENSSPUG00000008615	DPP3 (ENSSPUG00000008593)	BBS1 (ENSSPUG00000008555)	ENSSPUG00000008541	FOSL1 (ENSSPUG00000008529) #12	ENSSPUG00000008516	FIBP (ENSSPUG00000008343) #13	EFEMP2 (ENSSPUG00000008270) #15	MUS81 (ENSSPUG00000008181) #16	ENSSPUG00000008152 #16	CFL1 (ENSSPUG00000008139) #17
Episquamata	ANCESTRAL SPECIES	19	ENSGT00940000159147	ENSGT00940000162438	ENSGT00390000016784	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232	ENSGT00940000161630 #14	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405	ENSGT00390000000610	ENSGT00940000161779
Toxicofera	ANCESTRAL SPECIES	28	ENSGT00940000154524.a	ENSGT00940000159147	ENSGT00390000016784.l	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232	ENSGT00940000161630 #14	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405	ENSGT00940000161779	ENSGT00940000157679
Elapidae	ANCESTRAL SPECIES	27	ENSGT00940000157743	ENSGT00940000154524.a	ENSGT00940000159147	ENSGT00390000016784.l	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232.e	ENSGT00940000161630 #14	ENSGT00940000160034 #12	ENSGT00940000162317.a	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405	ENSGT00940000161779	ENSGT00940000157679
Elapidae_a	ANCESTRAL SPECIES	43	ENSGT00940000159147	ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b	ENSGT00390000016784.l	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b.b	ENSGT00940000154901.C.b.f.b.b.a.b.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232.e	ENSGT00940000161630 #14	ENSGT00940000160034 #12	ENSGT00940000162317.a	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405	ENSGT00940000161779	ENSGT00940000157679
Acanthophiinae	ANCESTRAL SPECIES	47	ENSGT00940000154524.a	ENSGT00940000159147	ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b	ENSGT00390000016784.l	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232.e	ENSGT00940000160034 #12	ENSGT00940000162317.a	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000161779	ENSGT00940000157679	ENSGT00950000182898.a.a.a.a.a	ENSGT00530000064165.a
Eastern brown snake	MODERN SPECIES	85	SLAMF8 (ENSPTXG00000010114)	SYVN1 (ENSPTXG00000010116)	SPDYC (ENSPTXG00000010117)	CAPN1 (ENSPTXG00000010118)	ENSPTXG00000010119	CDC42EP2 (ENSPTXG00000010120) #37	DPF2 (ENSPTXG00000010121) #36	ENSPTXG00000010123	ENSPTXG00000010206	ENSPTXG00000010225	ENSPTXG00000010331	ENSPTXG00000010336	AP5B1 (ENSPTXG00000010337)	ENSPTXG00000010338	KAT5 (ENSPTXG00000010339) #21	RELA (ENSPTXG00000010343) #22	C11orf68 (ENSPTXG00000010863)	DRAP1 (ENSPTXG00000010864) #11	PELI3 (ENSPTXG00000010866)	DPP3 (ENSPTXG00000010869)	ENSPTXG00000010872	BBS1 (ENSPTXG00000010881)	FOSL1 (ENSPTXG00000010973) #12	ENSPTXG00000010974	FIBP (ENSPTXG00000010975) #13	EFEMP2 (ENSPTXG00000010977) #15	ENSPTXG00000010978 #16	CFL1 (ENSPTXG00000010979) #17	BRMS1 (ENSPTXG00000010980)	B4GAT1 (ENSPTXG00000010981)	SLC29A2 (ENSPTXG00000010982)
Mainland tiger snake	MODERN SPECIES	2087																ENSNSUG00000001764 #22
Blue-lipped sea krait	MODERN SPECIES	10945																RELA (ENSLLTG00000009175) #22
Indian cobra	MODERN SPECIES	17	ENSNNAG00000007087	SYVN1 (ENSNNAG00000007062)	SPDYC (ENSNNAG00000007033)	CAPN1 (ENSNNAG00000006988)	CDC42EP2 (ENSNNAG00000006965) #37	DPF2 (ENSNNAG00000006889) #36	ENSNNAG00000006513	ENSNNAG00000006165	ENSNNAG00000005756	ENSNNAG00000005405	ENSNNAG00000005118	OVOL1 (ENSNNAG00000005073) #19	AP5B1 (ENSNNAG00000005057)	ENSNNAG00000005042	ENSNNAG00000005022	RELA (ENSNNAG00000004992) #22	C11orf68 (ENSNNAG00000004981)	ENSNNAG00000004908	ENSNNAG00000004888	PELI3 (ENSNNAG00000004868)	DPP3 (ENSNNAG00000003999)	ENSNNAG00000003873	ENSNNAG00000016176	ENSNNAG00000016168	CTSW (ENSNNAG00000016157) #14	FOSL1 (ENSNNAG00000016109) #12	ENSNNAG00000016095	FIBP (ENSNNAG00000016071) #13	EFEMP2 (ENSNNAG00000016041) #15	MUS81 (ENSNNAG00000016013) #16	CFL1 (ENSNNAG00000016006) #17
Lizard	MODERN SPECIES	615																ENSACAG00000041290 #22
Laterata	ANCESTRAL SPECIES	62		ENSGT00940000162438	ENSGT00390000016784	ENSGT00940000161776 #37	ENSGT00940000155070 #36	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00960000189006	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000154556	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232	ENSGT00940000161630 #14	ENSGT00550000074954	ENSGT00940000160034 #12	ENSGT00940000162317	ENSGT00390000015815 #13	ENSGT00940000159437 #15	ENSGT00390000005498 #16	ENSGT00950000183000.c.a.a #17	ENSGT00940000162405
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000015024	CAPN1 (ENSPMRG00000015032)	ENSPMRG00000015045	ENSPMRG00000015050	SF3B2 (ENSPMRG00000015057)	MRPL11 (ENSPMRG00000015070)	ENSPMRG00000015077	NPAS4 (ENSPMRG00000015084)	SLC29A2 (ENSPMRG00000015099)	B4GAT1 (ENSPMRG00000015104)	BRMS1 (ENSPMRG00000015111)	ENSPMRG00000015123	ENSPMRG00000015135	KAT5 (ENSPMRG00000015140) #21	ENSPMRG00000015151	RELA (ENSPMRG00000015157) #22	C11orf68 (ENSPMRG00000015169)	DRAP1 (ENSPMRG00000015172) #11	ENSPMRG00000015177	PELI3 (ENSPMRG00000015185)	DPP3 (ENSPMRG00000015191)	BBS1 (ENSPMRG00000015200)	ENSPMRG00000015208 #14	ENSPMRG00000015216	FOSL1 (ENSPMRG00000015223) #12	CCDC85B (ENSPMRG00000015226)	FIBP (ENSPMRG00000015231) #13	EFEMP2 (ENSPMRG00000015236) #15	MUS81 (ENSPMRG00000015240) #16	ENSPMRG00000015247	ENSPMRG00000015252
Argentine black and white tegu	MODERN SPECIES	80	SPTBN2 (ENSSMRG00000020347)	ENSSMRG00000020348	ENSSMRG00000020349	CCS (ENSSMRG00000020350)	RBM14 (ENSSMRG00000020351)	POLA2 (ENSSMRG00000020352)	DPF2 (ENSSMRG00000020354) #36	CHRM1 (ENSSMRG00000020355)	ENSSMRG00000020357	ENSSMRG00000020358	ENSSMRG00000020359	ENSSMRG00000020360	OVOL1 (ENSSMRG00000020361) #19	AP5B1 (ENSSMRG00000020362)	ENSSMRG00000020363	RELA (ENSSMRG00000020364) #22	ENSSMRG00000020365	C11orf68 (ENSSMRG00000020366)	DRAP1 (ENSSMRG00000020367) #11	ENSSMRG00000020368	PELI3 (ENSSMRG00000020369)	DPP3 (ENSSMRG00000020370)	BBS1 (ENSSMRG00000020371)	ENSSMRG00000020372 #14	ENSSMRG00000020374	FOSL1 (ENSSMRG00000020375) #12	CCDC85B (ENSSMRG00000020376)	FIBP (ENSSMRG00000020377) #13	EFEMP2 (ENSSMRG00000020378) #15	MUS81 (ENSSMRG00000020379) #16	CFL1 (ENSSMRG00000020380) #17
Archelosauria	ANCESTRAL SPECIES	92												ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00390000018173	ENSGT00940000155559.a.b	ENSGT00940000161083	ENSGT00950000182980.a.b.a.b.b	ENSGT00940000156646	ENSGT00940000164878	ENSGT00390000007071 #9	ENSGT00390000011180 #8	ENSGT00940000172086	ENSGT00900000141164	ENSGT00940000165651	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000162773 #18	ENSGT00950000183000.c.a.a #17	ENSGT00390000005498 #16	ENSGT00940000159437 #15	ENSGT00390000015815 #13	ENSGT00940000162317	ENSGT00940000160034 #12	ENSGT00940000161630 #14	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00940000162405	ENSGT00940000161834
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00950000182980.a.b.a.b.b	ENSGT00940000156646	ENSGT00940000164878	ENSGT00390000007071 #9	ENSGT00390000011180 #8	ENSGT00390000018613.b #7	ENSGT00940000164681	ENSGT00950000185159.C	ENSGT00940000161375.b	ENSGT00940000165651	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000162773 #18	ENSGT00950000183000.c.a.a #17	ENSGT00390000005498 #16	ENSGT00940000159437 #15	ENSGT00390000015815 #13	ENSGT00940000162317	ENSGT00940000160034 #12	ENSGT00940000161630 #14	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00940000162405	ENSGT00940000161834
Emydidae	ANCESTRAL SPECIES	13	ENSGT00950000182980.a.b.a.b.b	ENSGT00940000156646	ENSGT00940000164878	ENSGT00390000007071 #9	ENSGT00390000011180 #8	ENSGT00390000018613.b #7	ENSGT00940000164681	ENSGT00950000185159.C	ENSGT00940000161375.b	ENSGT00940000165651	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000162773 #18	ENSGT00950000183000.c.a.a #17	ENSGT00390000005498 #16	ENSGT00940000159437 #15	ENSGT00390000015815 #13	ENSGT00940000162317	ENSGT00940000160034 #12	ENSGT00940000161630 #14	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00940000162405	ENSGT00940000161834
Three-toed box turtle	MODERN SPECIES	33	ENSTMTG00000001778	RPS6KA4 (ENSTMTG00000000708)	ENSTMTG00000000382	SLC3A2 (ENSTMTG00000000348)	SART1 (ENSTMTG00000000301) #9	EIF1AD (ENSTMTG00000000279) #8	ENSTMTG00000000267 #7	ENSTMTG00000000245	CST6 (ENSTMTG00000000227)	ENSTMTG00000000220	PC (ENSTMTG00000000172)	OVOL1 (ENSTMTG00000000137) #19	AP5B1 (ENSTMTG00000000059)	ENSTMTG00000019196	KAT5 (ENSTMTG00000019175) #21	ENSTMTG00000019155 #22	DRAP1 (ENSTMTG00000019141) #11	SNX32 (ENSTMTG00000019115) #18	CFL1 (ENSTMTG00000019099) #17	MUS81 (ENSTMTG00000019021) #16	EFEMP2 (ENSTMTG00000018986) #15	FIBP (ENSTMTG00000018964) #13	CCDC85B (ENSTMTG00000018955)	FOSL1 (ENSTMTG00000018935) #12	ENSTMTG00000018923	ENSTMTG00000018913	DPP3 (ENSTMTG00000018890)	PELI3 (ENSTMTG00000018870)	ENSTMTG00000018845	CD248 (ENSTMTG00000018827)	RIN1 (ENSTMTG00000018805)
painted turtle	MODERN SPECIES	2386	ENSCPBG00000023440	SLC3A2 (ENSCPBG00000023438)	ENSCPBG00000023437	SART1 (ENSCPBG00000023434) #9	EIF1AD (ENSCPBG00000023432) #8	BANF1 (ENSCPBG00000023429) #7	ENSCPBG00000023424	ENSCPBG00000023420	CST6 (ENSCPBG00000023419)	ENSCPBG00000023416	PC (ENSCPBG00000023413)	OVOL1 (ENSCPBG00000023411) #19	AP5B1 (ENSCPBG00000023410)	ENSCPBG00000023408	KAT5 (ENSCPBG00000023405) #21	RELA (ENSCPBG00000023402) #22	C11orf68 (ENSCPBG00000023400)	DRAP1 (ENSCPBG00000023398) #11	SNX32 (ENSCPBG00000023395) #18	CFL1 (ENSCPBG00000023392) #17	MUS81 (ENSCPBG00000023389) #16	EFEMP2 (ENSCPBG00000023385) #15	FIBP (ENSCPBG00000023383) #13	CCDC85B (ENSCPBG00000023382)	FOSL1 (ENSCPBG00000023380) #12	ENSCPBG00000023379	ENSCPBG00000023378	ENSCPBG00000023374 #14	ENSCPBG00000023370 #14	ENSCPBG00000023358	DPP3 (ENSCPBG00000022600)
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00950000182980.a.b.a.b.b	ENSGT00940000156646	ENSGT00940000164878	ENSGT00390000007071 #9	ENSGT00390000011180 #8	ENSGT00390000018613.b #7	ENSGT00940000164681	ENSGT00950000185159.C	ENSGT00940000161375.b	ENSGT00940000165651	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00530000064721	ENSGT00940000166023	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000162773 #18	ENSGT00950000183000.c.a.a #17	ENSGT00390000005498 #16	ENSGT00940000159437 #15	ENSGT00390000015815 #13	ENSGT00940000162317	ENSGT00940000160034 #12	ENSGT00940000161630 #14	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00940000162405	ENSGT00940000161834
Abingdon island giant tortoise	MODERN SPECIES	2278	SLC3A2 (ENSCABG00000000464)	ENSCABG00000000462	SART1 (ENSCABG00000000457) #9	EIF1AD (ENSCABG00000000429) #8	BANF1 (ENSCABG00000000410) #7	ENSCABG00000000303	ENSCABG00000018112	ENSCABG00000018111	CST6 (ENSCABG00000018108)	ENSCABG00000018107	PC (ENSCABG00000017822)	OVOL1 (ENSCABG00000017768) #19	AP5B1 (ENSCABG00000017764)	ENSCABG00000017758	KAT5 (ENSCABG00000017713) #21	RELA (ENSCABG00000017707) #22	C11orf68 (ENSCABG00000017704)	DRAP1 (ENSCABG00000017702) #11	SNX32 (ENSCABG00000017632) #18	CFL1 (ENSCABG00000017616) #17	MUS81 (ENSCABG00000017614) #16	EFEMP2 (ENSCABG00000017611) #15	FIBP (ENSCABG00000017606) #13	CCDC85B (ENSCABG00000017602)	ENSCABG00000017599	ENSCABG00000017596	CTSW (ENSCABG00000017547) #14	BBS1 (ENSCABG00000017540)	DPP3 (ENSCABG00000017459)	PELI3 (ENSCABG00000017430)	ENSCABG00000017427
Goode s thornscrub tortoise	MODERN SPECIES	21	SLC3A2 (ENSGEVG00005015132)	ENSGEVG00005015159	ENSGEVG00005015212	SART1 (ENSGEVG00005015275) #9	EIF1AD (ENSGEVG00005015465) #8	BANF1 (ENSGEVG00005015483) #7	ENSGEVG00005015503	ENSGEVG00005015518	CST6 (ENSGEVG00005015559)	PC (ENSGEVG00005015577)	ENSGEVG00005015604	OVOL1 (ENSGEVG00005015648) #19	AP5B1 (ENSGEVG00005015706)	ENSGEVG00005015716	KAT5 (ENSGEVG00005015753) #21	RELA (ENSGEVG00005009181) #22	C11orf68 (ENSGEVG00005009223)	DRAP1 (ENSGEVG00005009246) #11	SNX32 (ENSGEVG00005009276) #18	CFL1 (ENSGEVG00005009328) #17	MUS81 (ENSGEVG00005009356) #16	EFEMP2 (ENSGEVG00005009430) #15	FIBP (ENSGEVG00005009683) #13	CCDC85B (ENSGEVG00005009716)	FOSL1 (ENSGEVG00005009761) #12	ENSGEVG00005009942	CTSW (ENSGEVG00005009987) #14	BBS1 (ENSGEVG00005010080)	DPP3 (ENSGEVG00005010143)	PELI3 (ENSGEVG00005010192)	ENSGEVG00005010269
Chinese turtle	MODERN SPECIES	1569	ENSPSIG00000018024	SLC3A2 (ENSPSIG00000002666)	B3GNT8 (ENSPSIG00000000838)	SART1 (ENSPSIG00000002712) #9	EIF1AD (ENSPSIG00000002790) #8	ENSPSIG00000000859	BANF1 (ENSPSIG00000000878) #7	ENSPSIG00000002800	ENSPSIG00000002829	ENSPSIG00000002841	PC (ENSPSIG00000002844)	ENSPSIG00000002910	OVOL1 (ENSPSIG00000002913) #19	AP5B1 (ENSPSIG00000002926)	KAT5 (ENSPSIG00000002928) #21	RELA (ENSPSIG00000002944) #22	C11orf68 (ENSPSIG00000000894)	ENSPSIG00000002956	SNX32 (ENSPSIG00000002960) #18	CFL1 (ENSPSIG00000002978) #17	MUS81 (ENSPSIG00000002980) #16	EFEMP2 (ENSPSIG00000002985) #15	FIBP (ENSPSIG00000003004) #13	FOSL1 (ENSPSIG00000003008) #12	ENSPSIG00000003010	BBS1 (ENSPSIG00000003012)	DPP3 (ENSPSIG00000003027)	PELI3 (ENSPSIG00000003057)	ENSPSIG00000003062	CD248 (ENSPSIG00000003077)	RIN1 (ENSPSIG00000003086)
Archosauria	ANCESTRAL SPECIES	98												ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11
Aves	ANCESTRAL SPECIES	96												ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11
Neognathae	ANCESTRAL SPECIES	46	ENSGT00390000002731	ENSGT00390000013444.a.b.b	ENSGT00940000154911	ENSGT00940000159375	ENSGT00390000006979.a	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00980000200147	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479
Neognathae_b	ANCESTRAL SPECIES	39	ENSGT00390000011639	ENSGT01100000263497.B	ENSGT00940000160376	ENSGT00390000012589	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00980000200147	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00940000170110	ENSGT00390000006979.a	ENSGT00940000159375	ENSGT00940000154911	ENSGT00390000013444.a.b.b
Passeriformes	ANCESTRAL SPECIES	43	ENSGT00940000156457	ENSGT00390000011639	ENSGT01100000263497.B	ENSGT00940000160376	ENSGT00390000012589	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000157743	ENSGT00940000170110	ENSGT00390000007479.cb	ENSGT00390000015119	ENSGT00640000091486.a	ENSGT00390000006979.a	ENSGT00940000159375
Great tit	MODERN SPECIES	472																ENSPMJG00000003946 #22
Passeriformes_d	ANCESTRAL SPECIES	38	ENSGT00940000156457	ENSGT00390000011639	ENSGT01100000263497.B	ENSGT00940000160376	ENSGT00390000012589	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000157743	ENSGT00940000170110	ENSGT00390000007479.cb	ENSGT00390000015119	ENSGT00640000091486.a	ENSGT00390000006979.a	ENSGT00940000159375
Passeriformes_g	ANCESTRAL SPECIES	44	ENSGT00940000156457	ENSGT00390000011639	ENSGT01100000263497.B	ENSGT00940000160376	ENSGT00390000012589	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000157743	ENSGT00940000170110	ENSGT00390000007479.cb	ENSGT00390000015119	ENSGT00640000091486.a	ENSGT00390000006979.a	ENSGT00940000159375
Passeroidea	ANCESTRAL SPECIES	54	ENSGT00940000156457	ENSGT00390000011639	ENSGT01100000263497.B	ENSGT00940000160376	ENSGT00390000012589	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00960000189643	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000157482	ENSGT00900000141164	ENSGT00940000161363 #19	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070.c #36
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	38	ENSTGUG00000029251	ENSTGUG00000020446	ENSTGUG00000024709	ENSTGUG00000027721	ENSTGUG00000025536	ENSTGUG00000024672	ENSTGUG00000025402	ENSTGUG00000019144	ENSTGUG00000023367	ENSTGUG00000018975	ENSTGUG00000026804	ENSTGUG00000021779	ENSTGUG00000028550	ENSTGUG00000024470 #19	ENSTGUG00000029491	ENSTGUG00000023063 #22	ENSTGUG00000028070 #11	ENSTGUG00000026404	ENSTGUG00000020056	ENSTGUG00000022802	ENSTGUG00000025700 #36	ENSTGUG00000028595 #37	ENSTGUG00000024413	ENSTGUG00000028151	MRPL49 (ENSTGUG00000021342)	ENSTGUG00000016038 #36	ENSTGUG00000027373 #36	ENSTGUG00000026586 #37	ENSTGUG00000019970	ENSTGUG00000021341	ENSTGUG00000020752
Zebra finch	MODERN SPECIES	38	UBXN1 (ENSTGUG00000029060)	ENSTGUG00000020286	ENSTGUG00000022941	ENSTGUG00000020163	ENSTGUG00000022623	ENSTGUG00000027990	STX5 (ENSTGUG00000021933)	ENSTGUG00000025733	ENSTGUG00000026539	ENSTGUG00000020420	ENSTGUG00000027751	ENSTGUG00000029242	ENSTGUG00000023760 #19	ENSTGUG00000027355	ENSTGUG00000024303	ENSTGUG00000029595 #22	ENSTGUG00000020782	ENSTGUG00000028923 #11	ENSTGUG00000029534
Common canary	MODERN SPECIES	927																ENSSCAG00000000409 #22
Neognathae_c	ANCESTRAL SPECIES	47														ENSGT00960000192922	ENSGT00940000163054.b	ENSGT00940000159867 #22	ENSGT00390000012424.a #11	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000155070 #36	ENSGT00940000161776 #37	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479.cb	ENSGT00390000015119
Kakapo	MODERN SPECIES	75	ENSSHBG00005008222	NAA10 (ENSSHBG00005008241)	HSD17B10 (ENSSHBG00005008270)	PFKFB1 (ENSSHBG00005008286)	ENSSHBG00005008296	GNL3L (ENSSHBG00005008311)	HUWE1 (ENSSHBG00005009089)	NDUFB11 (ENSSHBG00005019046)	RBM10 (ENSSHBG00005019052)	ENSSHBG00005019288	ENSSHBG00005019289	ENSSHBG00005019291	CDK16 (ENSSHBG00005019294)	ENSSHBG00005019295	ENSSHBG00005019297	RELA (ENSSHBG00005019302) #22	DRAP1 (ENSSHBG00005019305) #11	ENSSHBG00005019307	ENSSHBG00005019310	ENSSHBG00005019314	DPF2 (ENSSHBG00005019320) #36	CDC42EP2 (ENSSHBG00005019329) #37	POLA2 (ENSSHBG00005019332)	CAPN1 (ENSSHBG00005019338)	SYVN1 (ENSSHBG00005019344)	ENSSHBG00005019348	MRPL49 (ENSSHBG00005019350)	FAU (ENSSHBG00005019353)	WDR74 (ENSSHBG00005019356)	INTS5 (ENSSHBG00005019375)	POLR2G (ENSSHBG00005019378)
Galloanserae	ANCESTRAL SPECIES	110															ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11
Phasianidae	ANCESTRAL SPECIES	80															ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11
Japanese quail	MODERN SPECIES	138																RELA (ENSCJPG00005000388) #22
Phasianidae_b	ANCESTRAL SPECIES	85															ENSGT00940000162343 #21	ENSGT00940000159867 #22	ENSGT00390000012424.a #11
Turkey	MODERN SPECIES	154																ENSMGAG00000019661 #22
Chicken	MODERN SPECIES	64				MTA2 (ENSGALG00010001725)	EML3 (ENSGALG00010001406)	POLA2 (ENSGALG00010001378)	CAPN1 (ENSGALG00010001351)	SPDYC (ENSGALG00010001350)	ENSGALG00010001330	ENSGALG00010001304	MRPL49 (ENSGALG00010001300)	ENSGALG00010001295	ENSGALG00010001291	ENSGALG00010001285 #21	ENSGALG00010001283	ENSGALG00010001277 #22	ENSGALG00010001271	DRAP1 (ENSGALG00010001270) #11
Anura	ANCESTRAL SPECIES	291																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000168756	ENSGT00390000011180 #8	ENSGT00390000018613.b #7	ENSGT00940000164006	ENSGT00950000183024.a.a.a
Frog	MODERN SPECIES	4	ENSXETG00000049309	kat5 (ENSXETG00000020586)	rnaseh2c (ENSXETG00000032466)	ENSXETG00000045307	bbs1 (ENSXETG00000026165)	dpp3 (ENSXETG00000020577)	mrpl11 (ENSXETG00000020574)	npas4 (ENSXETG00000020576)	slc29a2 (ENSXETG00000020572)	brms1 (ENSXETG00000020567)	b4gat1 (ENSXETG00000020571)	rin1 (ENSXETG00000020565)	pmt [provisional] (ENSXETG00000026169)	cd248 (ENSXETG00000046197)	foxa4 (ENSXETG00000026171)	rela (ENSXETG00000026173) #22	c11orf68 (ENSXETG00000020535)	drap1 (ENSXETG00000018519) #11	ENSXETG00000048824	ENSXETG00000041835	sart1 (ENSXETG00000011429)	eif1ad (ENSXETG00000011431) #8	zdhhc24 (ENSXETG00000042533)	prkd3 (ENSXETG00000011427)	ENSXETG00000047997	sptbn2 (ENSXETG00000015170)	prokr1 (ENSXETG00000011423)	ccs (ENSXETG00000011424)	rbm4b (ENSXETG00000026649)	rbm14 (ENSXETG00000026650)	actn3 (ENSXETG00000011409)
Leishan spiny toad	MODERN SPECIES	1	DPP3 (ENSLLEG00000010849)	ENSLLEG00000011271	MRPL11 (ENSLLEG00000011289)	NPAS4 (ENSLLEG00000011359)	ENSLLEG00000011428	ENSLLEG00000011457	B4GAT1 (ENSLLEG00000011676)	BRMS1 (ENSLLEG00000011718)	RIN1 (ENSLLEG00000011798)	ENSLLEG00000011945	ENSLLEG00000012035	ENSLLEG00000012060	CD248 (ENSLLEG00000012073)	ENSLLEG00000012083	ENSLLEG00000012092	RELA (ENSLLEG00000012122) #22	ENSLLEG00000012241	C11orf68 (ENSLLEG00000012261)	DRAP1 (ENSLLEG00000012290) #11	SPTBN2 (ENSLLEG00000012397)	ENSLLEG00000012954	ENSLLEG00000012976	RCE1 (ENSLLEG00000013023)	ENSLLEG00000013101	ENSLLEG00000013424	BANF1 (ENSLLEG00000013454) #7	EIF1AD (ENSLLEG00000013491) #8	ENSLLEG00000013554	ENSLLEG00000013678	ENSLLEG00000013702	ENSLLEG00000013797
Coelacanth	MODERN SPECIES	1021				ENSLACG00000002550	ENSLACG00000004267	MRPL11 (ENSLACG00000005779)	NPAS4 (ENSLACG00000006639)	B4GAT1 (ENSLACG00000008788)	POLA2 (ENSLACG00000009162)	CDC42EP2 (ENSLACG00000010553) #37	ENSLACG00000011057	SART1 (ENSLACG00000011165) #9	EIF1AD (ENSLACG00000011475) #8	ENSLACG00000012000	BRMS1 (ENSLACG00000013334)	rela (ENSLACG00000013719) #22	C11orf68 (ENSLACG00000013996)
Actinopterygii	ANCESTRAL SPECIES	711																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11
Neopterygii	ANCESTRAL SPECIES	318																ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000158735 #24	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483	ENSGT00940000157258	ENSGT00940000164485.a	ENSGT00940000165455
Osteoglossocephalai	ANCESTRAL SPECIES	294								ENSGT00940000159147.b.a	ENSGT00390000005232	ENSGT00940000158605	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00390000007335	ENSGT00390000013169 #29	ENSGT00390000008727.a.a.c	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b
Clupeocephala	ANCESTRAL SPECIES	65														ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000157258	ENSGT00940000164485.a.a	ENSGT00940000164485.a.b	ENSGT00940000165455	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00940000154589.b	ENSGT00940000162009.a	ENSGT00950000183136.b.a.b	ENSGT00940000166282.A
Otomorpha	ANCESTRAL SPECIES	506														ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b
Clupeiformes	ANCESTRAL SPECIES	427									ENSGT00940000164430.a.b.a	ENSGT00940000159753.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00530000063883	ENSGT00940000154800	ENSGT00980000203171	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25
Denticle herring	MODERN SPECIES		zgc:77439 (ENSDCDG00000019659)	ENSDCDG00000019656	ENSDCDG00000019654	ENSDCDG00000019651	ENSDCDG00000019649	zanl (ENSDCDG00000019645)	trappc14 (ENSDCDG00000019638)	gal3st4 (ENSDCDG00000019635)	per1b (ENSDCDG00000018952)	pcolceb (ENSDCDG00000018935)	PAQR9 (ENSDCDG00000018934)	epdl1 (ENSDCDG00000018927)	ALPK1 (ENSDCDG00000018922)	SLC29A2 (ENSDCDG00000018886)	PPP1CB (ENSDCDG00000017817)	rela (ENSDCDG00000017742) #22	zgc:63470 (ENSDCDG00000017736)	drap1 (ENSDCDG00000017735) #11	MAP3K11 (ENSDCDG00000017731) #25	tada2b (ENSDCDG00000017728)	grpel1 (ENSDCDG00000017725)	SORCS2 (ENSDCDG00000016911)	AFAP1 (ENSDCDG00000016790)	ABLIM2 (ENSDCDG00000015924)	ENSDCDG00000015904	zcchc4 (ENSDCDG00000015900)	mfsd8 (ENSDCDG00000015890)	HTRA3 (ENSDCDG00000015661)	acox3 (ENSDCDG00000013987)	ENSDCDG00000003762	rwdd (ENSDCDG00000003758)
Atlantic herring	MODERN SPECIES	9	coro1b (ENSCHAG00000012528)	cldnd1a (ENSCHAG00000012580)	ACY3 (ENSCHAG00000012587)	ENSCHAG00000012595	ENSCHAG00000012600	ENSCHAG00000012624	ENSCHAG00000012643	ENSCHAG00000012663	ENSCHAG00000012684	ENSCHAG00000012997	ENSCHAG00000013054	ENSCHAG00000013067	ENSCHAG00000013072	SLC29A2 (ENSCHAG00000013083)	ENSCHAG00000013230	rela (ENSCHAG00000013762) #22	zgc:63470 (ENSCHAG00000013773)	drap1 (ENSCHAG00000013792) #11	MAP3K11 (ENSCHAG00000013834) #25	ENSCHAG00000013840	ENSCHAG00000013870	ENSCHAG00000013887	epdl1 (ENSCHAG00000013904)	ENSCHAG00000013937	wrap53 (ENSCHAG00000014163)	efnb3b (ENSCHAG00000014459)	serpinh2 (ENSCHAG00000014512)	ENSCHAG00000014550	DNAH2 (ENSCHAG00000014576)	KDM6B (ENSCHAG00000015440)	tmem88b (ENSCHAG00000015574)
Otophysi	ANCESTRAL SPECIES	9	ENSGT00390000006970	ENSGT01100000263644	ENSGT00390000018123.a.b	ENSGT00940000159445	ENSGT00940000161519	ENSGT00940000160206.e	ENSGT00940000164991.a.a	ENSGT01040000240385.B	ENSGT00940000159753	ENSGT00940000164430.a.b.a	ENSGT00940000155378.c.b	ENSGT00540000073610.B	ENSGT00980000198603.A	ENSGT01070000253822.D.b	ENSGT00940000159796.a.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b
Characiphysae	ANCESTRAL SPECIES	58	ENSGT00940000164430.a.b.a	ENSGT00940000159753	ENSGT00390000002596.a	ENSGT00390000001189.b.i	ENSGT00390000017890.b.a	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT01060000248862	ENSGT00940000153617.B	ENSGT00940000155804.k.a	ENSGT00530000063790.b	ENSGT00940000154644.jb.b.g.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749.a.a	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000160483.k.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000155586.B	ENSGT00940000155527.j.a	ENSGT00940000154658.a	ENSGT00940000159778.a	ENSGT00390000015386.b	ENSGT00940000161707.a.b
Characiphysae_b	ANCESTRAL SPECIES	148	ENSGT00940000159753	ENSGT00390000002596.a	ENSGT00390000001189.b.i	ENSGT00390000017890.b.a	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00510000047770.c.b	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT01060000248862	ENSGT00940000153617.B	ENSGT00940000155804.k.a	ENSGT00530000063790.b	ENSGT00940000154644.jb.b.g.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749.a.a	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000160483.k.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000155586.B	ENSGT00940000155527.j.a	ENSGT00940000154658.a	ENSGT00940000159778.a	ENSGT00390000015386.b	ENSGT00940000161707.a.b
Characoidei	ANCESTRAL SPECIES	168	ENSGT00940000164430.a.b.a	ENSGT00940000159753	ENSGT00390000002596.a	ENSGT00390000001189.b.i	ENSGT00390000017890.b.a	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT01060000248862	ENSGT00940000153617.B	ENSGT00940000155804.k.a	ENSGT00530000063790.b	ENSGT00940000154644.jb.b.g.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749.a.a	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000160483.k.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000155586.B	ENSGT00940000155527.j.a	ENSGT00940000154658.a	ENSGT00940000159778.a	ENSGT00390000015386.b	ENSGT00940000161707.a.b
Red-bellied piranha	MODERN SPECIES	51						CAAP1 (ENSPNAG00000014557)	ENSPNAG00000014569	ENSPNAG00000003180	PTPRD (ENSPNAG00000003278)	MED9 (ENSPNAG00000003299)	ENSPNAG00000014870	ENSPNAG00000003307	TYRP1 (ENSPNAG00000014893)	LURAP1L (ENSPNAG00000014904)	ppp1cb (ENSPNAG00000014924)	rela (ENSPNAG00000005984) #22	zgc:63470 (ENSPNAG00000014971)	drap1 (ENSPNAG00000015008) #11	MAP3K11 (ENSPNAG00000015016) #25	ENSPNAG00000015026	ENSPNAG00000003345	NRXN2 (ENSPNAG00000015184)	ENSPNAG00000015200	RASGRP2 (ENSPNAG00000015291)	ENSPNAG00000015310	MPDZ (ENSPNAG00000015412)	ENSPNAG00000015448	ENSPNAG00000015457	ADGRL3 (ENSPNAG00000015641)	ENSPNAG00000015779	HGFAC (ENSPNAG00000015800)
Mexicana tetra	MODERN SPECIES	13	smim18 (ENSAMXG00000025268)	gtf2e2 (ENSAMXG00000021633)	qdprb.4 (ENSAMXG00000035389)	ldb2b (ENSAMXG00000021629)	tapt1b (ENSAMXG00000013101)	prom1b (ENSAMXG00000021625)	fgfbp2b (ENSAMXG00000021623)	ENSAMXG00000021622	ENSAMXG00000037179	PTPRD (ENSAMXG00000021621)	ENSAMXG00000035941	ENSAMXG00000035944	TYRP1 (ENSAMXG00000021619)	LURAP1L (ENSAMXG00000042695)	ppp1cb (ENSAMXG00000035518)	rela (ENSAMXG00000021617) #22	drap1 (ENSAMXG00000034535) #11	MAP3K11 (ENSAMXG00000021612) #25	ENSAMXG00000033032	STRN (ENSAMXG00000021609)	HEATR5B (ENSAMXG00000021607)	ltb4r2a (ENSAMXG00000029069)	ltb4r (ENSAMXG00000030787)	SLC24A2 (ENSAMXG00000021601)	ENSAMXG00000031293	ENSAMXG00000042568	ADRA2C (ENSAMXG00000025266)	DOK7 (ENSAMXG00000021597)	HGFAC (ENSAMXG00000021594)	ENSAMXG00000031940	ENSAMXG00000021540
Electric eel	MODERN SPECIES	377															ENSEEEG00000016873	rela (ENSEEEG00000016874) #22	zgc:63470 (ENSEEEG00000016875)	drap1 (ENSEEEG00000016877) #11	ENSEEEG00000016878 #25	ENSEEEG00000016879	ENSEEEG00000016882	ENSEEEG00000016908	nkx6.2 (ENSEEEG00000017267)	INPP5A (ENSEEEG00000017276)	PWWP2B (ENSEEEG00000017346)	STK32C (ENSEEEG00000017348)	ENSEEEG00000017349	tmem254 (ENSEEEG00000017350)	ENSEEEG00000017351	srfb (ENSEEEG00000017352)
Channel catfish	MODERN SPECIES	21	ENSIPUG00000012318	CAAP1 (ENSIPUG00000012290)	ENSIPUG00000012272	PTPRD (ENSIPUG00000011999)	ENSIPUG00000011950	ENSIPUG00000011926	ENSIPUG00000011910	ENSIPUG00000011901	ENSIPUG00000011890	ENSIPUG00000011869	ENSIPUG00000011842	ENSIPUG00000011825	TYRP1 (ENSIPUG00000011768)	lurap1l (ENSIPUG00000011753)	pp1b (ENSIPUG00000011678)	rela (ENSIPUG00000011563) #22	zgc:63470 (ENSIPUG00000011545)	drap1 (ENSIPUG00000011518) #11	MAP3K11 (ENSIPUG00000011483) #25	ENSIPUG00000011460	ENSIPUG00000011448	ENSIPUG00000011439	NRXN2 (ENSIPUG00000011361)	ENSIPUG00000011337	crgm2 (ENSIPUG00000011305)	RASGRP2 (ENSIPUG00000011247)	SLC29A2 (ENSIPUG00000011209)	SLC29A2 (ENSIPUG00000011173)	MPDZ (ENSIPUG00000011101)	adgrl3 (ENSIPUG00000010583)	ENSIPUG00000010251
Cyprinoidei	ANCESTRAL SPECIES	230													ENSGT00980000198603.A	ENSGT01070000253822.D.b	ENSGT00940000159796.a.b	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.j #25	ENSGT00940000155978.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	827											ENSGT00940000159753	ENSGT00940000164430.a.b.a.a	ENSGT00940000155378.c.b	ENSGT00540000073610.B	ENSGT01070000253822.D.b.x.a	ENSGT00940000159867.k #22	ENSGT00390000011640	ENSGT00940000161064.j.b.a #25
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2171									ENSCARG00000037714	ENSCARG00000037665	ENSCARG00000037642	ENSCARG00000037608	ENSCARG00000037576	ENSCARG00000037543	ENSCARG00000037443	rela (ENSCARG00000037300) #22	zgc:63470 (ENSCARG00000037285)	drap1 (ENSCARG00000037261) #11	MAP3K11 (ENSCARG00000037174) #25
Goldfish	MODERN SPECIES	456																rela (ENSCARG00000051342) #22	zgc:63470 (ENSCARG00000051503)	ENSCARG00000051513	drap1 (ENSCARG00000051533) #11	MAP3K11 (ENSCARG00000051782) #25	NRXN2 (ENSCARG00000051827)
Cyprininae_a	ANCESTRAL SPECIES	583									ENSGT01090000260317.C	ENSGT00940000159753	ENSGT00940000164430.a.b.a.a	ENSGT00940000155378.c.b	ENSGT00540000073610.B	ENSGT01070000253822.D.b.x.a	ENSGT01070000253822.D.b.y.b	ENSGT00940000159867.k #22	ENSGT00390000011640	ENSGT00390000012424.a.d #11
Common carp reference	MODERN SPECIES	6	ENSCCRG00000023264	ENSCCRG00000022650	ENSCCRG00000082220	ENSCCRG00000045744	ENSCCRG00000014692	ENSCCRG00000036554	ENSCCRG00000039858	ENSCCRG00000058754	ENSCCRG00000063449	ENSCCRG00000021238	ENSCCRG00000068808	ENSCCRG00000059207	ENSCCRG00000028223	ENSCCRG00000033901	zgc:63470 (ENSCCRG00000081445)	rela (ENSCCRG00000044248) #22	ENSCCRG00000064763 #25	ENSCCRG00000081700	ENSCCRG00000025931	ENSCCRG00000078648	ENSCCRG00000063714	ENSCCRG00000059945	ENSCCRG00000079141	ENSCCRG00000057050	ENSCCRG00000055951	ENSCCRG00000039037	ENSCCRG00000039049	ENSCCRG00000008867	ENSCCRG00000066013	ENSCCRG00000039075	ENSCCRG00000015314
Golden-line barbel	MODERN SPECIES	2019												ENSSGRG00000002788	ENSSGRG00000002790	ENSSGRG00000002791	ENSSGRG00000002792	rela (ENSSGRG00000002805) #22	zgc:63470 (ENSSGRG00000003286)	drap1 (ENSSGRG00000003287) #11
Cyprininae	ANCESTRAL SPECIES	883													ENSGT01050000244843.c.b	ENSGT01070000253822.D.b.y.b	ENSGT00940000159796.a.b	ENSGT00940000159867.l #22	ENSGT00390000012424.a #11	ENSGT00940000161064.j.b.b #25	ENSGT00940000155978.a.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2505														ENSCARG00000040389	CABP2 (ENSCARG00000040366)	rela (ENSCARG00000040175) #22	drap1 (ENSCARG00000040145) #11	MAP3K11 (ENSCARG00000040118) #25	NRXN2 (ENSCARG00000039381)
Goldfish	MODERN SPECIES	47	ENSCARG00000025704	ENSCARG00000025695	ENSCARG00000025693	ENSCARG00000025686	ENSCARG00000025672	ENSCARG00000025667	epdl1 (ENSCARG00000025437)	ENSCARG00000025419	ENSCARG00000025407	epdl1 (ENSCARG00000025081)	dctn1a (ENSCARG00000019526)	ENSCARG00000019330	ENSCARG00000019323	ENSCARG00000019310	ENSCARG00000019301	rela (ENSCARG00000019155) #22	drap1 (ENSCARG00000019138) #11	MAP3K11 (ENSCARG00000019128) #25
Cyprininae_a	ANCESTRAL SPECIES	736														ENSGT01070000253822.D.b.y.a.a.b.b	ENSGT00940000159796.a.b	ENSGT00940000159867.l #22	ENSGT00390000012424.a.c #11	ENSGT00940000161064.j.b.b #25
Common carp reference	MODERN SPECIES		ENSCCRG00000063580	ENSCCRG00000065106	ENSCCRG00000053374	ENSCCRG00000062340	ENSCCRG00000056983	ENSCCRG00000067223	ENSCCRG00000056355	ENSCCRG00000015607	ENSCCRG00000062875	ENSCCRG00000007344	ENSCCRG00000005402	ENSCCRG00000024940	ENSCCRG00000016647	ENSCCRG00000055018	ENSCCRG00000082380	rela (ENSCCRG00000057226) #22	drap1 (ENSCCRG00000065625) #11	ENSCCRG00000060671 #25	ENSCCRG00000054633	ENSCCRG00000025945	ENSCCRG00000055590	ENSCCRG00000072876	ENSCCRG00000063773	ENSCCRG00000079983
Golden-line barbel	MODERN SPECIES	2037													ENSSGRG00000008371	ENSSGRG00000008375	ENSSGRG00000008384	rela (ENSSGRG00000008407) #22
Zebrafish	MODERN SPECIES	22	lpcat4 (ENSDARG00000035028)	emc4 (ENSDARG00000039268)	ENSDARG00000105551	ENSDARG00000105485	ENSDARG00000092488	ENSDARG00000090965	ENSDARG00000115070	ENSDARG00000111755	ENSDARG00000105495	dctn1a (ENSDARG00000019743)	epdl1 (ENSDARG00000076386)	ENSDARG00000105657	ENSDARG00000102296	ENSDARG00000067794	CABP4 (ENSDARG00000105631)	rela (ENSDARG00000098696) #22	C7H11orf68 (ENSDARG00000019406)	drap1 (ENSDARG00000041203) #11	MAP3K11 (ENSDARG00000091521) #25	ENSDARG00000063150	NRXN2 (ENSDARG00000113112)	ENSDARG00000116076
Euteleosteomorpha	ANCESTRAL SPECIES	78														ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00950000183148.b.a.g.a	ENSGT00940000157258	ENSGT00940000164485.a.a	ENSGT00940000164485.a.b
Protacanthopterygii	ANCESTRAL SPECIES	57	ENSGT00940000158994	ENSGT00390000006366	ENSGT00440000039527.z	ENSGT00390000013183.d.a.b	ENSGT00440000039527.y	ENSGT00940000156729	ENSGT01050000244924.a.a.a	ENSGT00390000012898	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212	ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819.c	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT01080000257510	ENSGT00950000183148.b.a.g.a	ENSGT00940000157258	ENSGT00940000164485.a.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	737													ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000154644.jb.a.b	ENSGT00940000159867.m #22	ENSGT00390000011640.g	ENSGT00390000012424.a.h #11	ENSGT00940000161064.e #25	ENSGT00940000155978.a.a.yc.b	ENSGT01030000234819.c	ENSGT00940000155978.a.a.`d	ENSGT00940000160483.l
Huchen	MODERN SPECIES	2688															ENSHHUG00000042866	rela (ENSHHUG00000042868) #22	zgc:63470 (ENSHHUG00000042879)	drap1 (ENSHHUG00000042882) #11	MAP3K11 (ENSHHUG00000042889) #25	ENSHHUG00000042900
Salmoninae_a	ANCESTRAL SPECIES	20	ENSGT00940000166995.c.a	ENSGT00390000004049.l.a	ENSGT00390000003738.a.a.g	ENSGT00940000159816.g	ENSGT00940000160688.k	ENSGT00950000183153.c.a.r.e	ENSGT00940000168324.c.a	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00940000159305.p	ENSGT00930000151033.d	ENSGT00940000161268.i	ENSGT00940000153212.u	ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000154644.jb.a.b	ENSGT00940000159867.m #22	ENSGT00390000011640.g	ENSGT00390000012424.a.h #11	ENSGT00940000161064.e #25	ENSGT00940000163749.c.b	ENSGT00940000155978.a.a.yc.b	ENSGT01030000234819.c	ENSGT00940000155978.a.a.`d.c.b	ENSGT00940000160483.k.b.a	ENSGT00390000006979.a.e	ENSGT01080000257510	ENSGT00950000183148.b.a.g.a.a	ENSGT00940000157258.c	ENSGT00940000164485.a.a.b	ENSGT00940000164485.a.b	ENSGT00940000166658.b.f
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000166995.c.a	ENSGT00390000004049.l.a	ENSGT00390000003738.a.a.g	ENSGT00940000159816.g	ENSGT00940000160688.k	ENSGT00950000183153.c.a.r.e	ENSGT00940000168324.c.a	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00940000159305.p.b	ENSGT00930000151033.d	ENSGT00940000161268.i	ENSGT00940000153212.u	ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000154644.jb.a.b	ENSGT00940000159867.m #22	ENSGT00390000011640.g	ENSGT00390000012424.a.h #11	ENSGT00940000161064.e #25	ENSGT00940000163749.c.b	ENSGT00940000155978.a.a.yc.b	ENSGT01030000234819.c	ENSGT00940000155978.a.a.`d.c.b	ENSGT00940000160483.k.b.a	ENSGT00940000154826	ENSGT00940000164430.a.b.a.f	ENSGT00390000006979.a.e	ENSGT01080000257510	ENSGT00950000183148.b.a.g.a.a	ENSGT00940000157258.c	ENSGT00940000164485.a.a.b
Rainbow trout	MODERN SPECIES	13	gbrap (ENSOMYG00000030400)	GPS2 (ENSOMYG00000030414)	ENSOMYG00000061056	ENSOMYG00000030458	YBX2 (ENSOMYG00000030498)	SLC2A4 (ENSOMYG00000030718)	ENSOMYG00000031377	ENSOMYG00000031433	capgb (ENSOMYG00000031438)	ENSOMYG00000031498	ENSOMYG00000031600	ENSOMYG00000031618	ENSOMYG00000031631	ENSOMYG00000071733	ENSOMYG00000071951	rela (ENSOMYG00000031656) #22	zgc:63470 (ENSOMYG00000031670)	drap1 (ENSOMYG00000031686) #11	ENSOMYG00000031713 #25	ENSOMYG00000031746	ENSOMYG00000075034	ENSOMYG00000031769	ENSOMYG00000059230	ENSOMYG00000062096	ENSOMYG00000059530	ENSOMYG00000031812	ENSOMYG00000031833	ENSOMYG00000031841	ENSOMYG00000031973	ENSOMYG00000032121	map4k2 (ENSOMYG00000032177)
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT00390000004049.l.a	ENSGT00390000003738.a.a.g	ENSGT00940000159816.g	ENSGT00940000160688.k	ENSGT00950000183153.c.a.r.e	ENSGT00940000168324.c.a	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00940000159305.p.b	ENSGT00930000151033.d	ENSGT00980000203069	ENSGT00940000161268.i	ENSGT00940000153212.u	ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000154644.jb.a.b	ENSGT00940000159867.m #22	ENSGT00390000011640.g	ENSGT00390000012424.a.h #11	ENSGT00940000161064.e #25	ENSGT00940000155978.a.a.`d.d	ENSGT00940000160483.l	ENSGT00940000163749.c.b	ENSGT00940000155978.a.a.yc.b	ENSGT01030000234819.c	ENSGT00940000155978.a.a.`d.c.b	ENSGT00940000160483.k.b.a	ENSGT00940000154826	ENSGT00940000164430.a.b.a.f	ENSGT00390000006979.a.e	ENSGT01080000257510	ENSGT00950000183148.b.a.g.a.a
Chinook salmon	MODERN SPECIES	6	CTDNEP1 (ENSOTSG00005047955)	ENSOTSG00005047956	GPS2 (ENSOTSG00005047957)	ENSOTSG00005047958	YBX2 (ENSOTSG00005047959)	SLC2A4 (ENSOTSG00005047960)	ENSOTSG00005047965	ENSOTSG00005013931	capgb (ENSOTSG00005013932)	ENSOTSG00005013936	ENSOTSG00005013938	ENSOTSG00005013939	ENSOTSG00005013943	ENSOTSG00005013944	ENSOTSG00005013950	rela (ENSOTSG00005014269) #22	zgc:63470 (ENSOTSG00005014270)	drap1 (ENSOTSG00005014271) #11	ENSOTSG00005014272 #25	ENSOTSG00005014274	NRXN2 (ENSOTSG00005014280)	ENSOTSG00005014281	ENSOTSG00005014282	ENSOTSG00005014283	RASGRP2 (ENSOTSG00005014285)	cst14a.1 (ENSOTSG00005014337)	ENSOTSG00005014339	otub1b (ENSOTSG00005014343)	ENSOTSG00005014345	sf1 (ENSOTSG00005014346)	rbm4.1 (ENSOTSG00005014349)
Coho salmon	MODERN SPECIES	29	ENSOKIG00005010161	GPS2 (ENSOKIG00005010201)	ENSOKIG00005010221	YBX2 (ENSOKIG00005010248)	SLC2A4 (ENSOKIG00005010277)	ENSOKIG00005010394	ENSOKIG00005010425	ENSOKIG00005010429	capgb (ENSOKIG00005010439)	POLR2A (ENSOKIG00005010460)	ENSOKIG00005010477	ENSOKIG00005010483	SLC29A2 (ENSOKIG00005010490)	ENSOKIG00005010500	ENSOKIG00005010522	rela (ENSOKIG00005010910) #22	zgc:63470 (ENSOKIG00005010925)	drap1 (ENSOKIG00005010931) #11	MAP3K11 (ENSOKIG00005010962) #25	ENSOKIG00005011013	ENSOKIG00005011086	ENSOKIG00005011099	ENSOKIG00005011105	RASGRP2 (ENSOKIG00005011133)	ENSOKIG00005011176	ENSOKIG00005011189	otub1b (ENSOKIG00005015177)	ENSOKIG00005015291	pygmb (ENSOKIG00005015349)	sf1 (ENSOKIG00005015513)	rbm4.1 (ENSOKIG00005015598)
Salmo	ANCESTRAL SPECIES	49	ENSGT01040000240503.B.x.a.a	ENSGT00940000166995.c.a	ENSGT00390000004049.l.a	ENSGT00390000003738.a.a.g	ENSGT00940000159816.g	ENSGT00940000160688.k	ENSGT00950000183153.c.a.r.e	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00940000159305.p	ENSGT00930000151033.d	ENSGT00940000161268.i	ENSGT00940000153212.u	ENSGT00940000164797.b.d	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000154644.jb.a.b	ENSGT00940000159867.m #22	ENSGT00390000011640.g	ENSGT00390000012424.a.h #11	ENSGT00940000161064.e #25	ENSGT00940000155978.a.a.yc.b	ENSGT00940000160483.k.b.a	ENSGT00940000154826	ENSGT00940000164430.a.b.a.f	ENSGT00390000006979.a.e	ENSGT01080000257510	ENSGT00950000183148.b.a.g.a.a	ENSGT00940000157258.c	ENSGT00940000164485.a.a.b	ENSGT00940000164485.a.b	ENSGT00940000166658.b.f	ENSGT00390000014237.e
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000082767	ENSSSAG00000091969	GPS2 (ENSSSAG00000005263)	ENSSSAG00000005218	YBX2 (ENSSSAG00000005194)	SLC2A4 (ENSSSAG00000093053)	ENSSSAG00000083890	ENSSSAG00000092063	ENSSSAG00000003660	ENSSSAG00000003493	ENSSSAG00000003469	ENSSSAG00000003463	ENSSSAG00000003456	ENSSSAG00000003437	ENSSSAG00000003352	rela (ENSSSAG00000003329) #22	cssa07h11orf68 (ENSSSAG00000003320)	drap1 (ENSSSAG00000084483) #11	ENSSSAG00000118017 #25	ENSSSAG00000080472	ENSSSAG00000002749	ENSSSAG00000002728	ENSSSAG00000002679	ENSSSAG00000002669	pygmb (ENSSSAG00000002459)	ENSSSAG00000100657	rbm4.2 (ENSSSAG00000002269)	map4k2 (ENSSSAG00000045830)	ENSSSAG00000045686	ENSSSAG00000045676	ENSSSAG00000045643
River trout	MODERN SPECIES	38	CTDNEP1 (ENSSTUG00000031934)	ENSSTUG00000031844	GPS2 (ENSSTUG00000031799)	ENSSTUG00000031760	YBX2 (ENSSTUG00000031748)	SLC2A4 (ENSSTUG00000030977)	ENSSTUG00000030959	ENSSTUG00000030952	capgb (ENSSTUG00000030872)	ENSSTUG00000030813	ENSSTUG00000030799	ENSSTUG00000030789	ENSSTUG00000030773	SLC29A2 (ENSSTUG00000030750)	ENSSTUG00000030659	rela (ENSSTUG00000030641) #22	zgc:63470 (ENSSTUG00000030630)	drap1 (ENSSTUG00000030606) #11	MAP3K11 (ENSSTUG00000030573) #25	ENSSTUG00000030566	ENSSTUG00000030538	ENSSTUG00000013691	ENSSTUG00000013683	ENSSTUG00000013676	RASGRP2 (ENSSTUG00000013569)	cst14a.1 (ENSSTUG00000013559)	epdl1 (ENSSTUG00000013542)	otub1b (ENSSTUG00000013492)	ENSSTUG00000013479	pygmb (ENSSTUG00000012643)	sf1 (ENSSTUG00000012346)
Salmoninae	ANCESTRAL SPECIES	330	ENSGT01040000240503.B.x.a.b	ENSGT00940000166995.c.b	ENSGT00390000004049.l.b	ENSGT00390000003738.a.a.h	ENSGT00940000159816.h	ENSGT00940000160688.l	ENSGT00950000183153.c.a.r.f	ENSGT00940000168324.c.b	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00940000159305.o	ENSGT00930000151033.c	ENSGT00940000161268.j	ENSGT00940000154035.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154644.jb.a.a	ENSGT00940000159867.n #22	ENSGT00390000011640.h	ENSGT00390000012424.a.g #11	ENSGT00940000161064.f #25	ENSGT00940000154292.a.b.c.a
Huchen	MODERN SPECIES	126	gabarapb (ENSHHUG00000041943)	GPS2 (ENSHHUG00000042065)	ENSHHUG00000042070	YBX2 (ENSHHUG00000042081)	SLC2A4 (ENSHHUG00000042100)	ENSHHUG00000042818	ENSHHUG00000042825	ENSHHUG00000042838	ENSHHUG00000000015	capgb (ENSHHUG00000000059)	POLR2A (ENSHHUG00000000162)	ENSHHUG00000000199	ENSHHUG00000000211	ENSHHUG00000000280	ENSHHUG00000000329	rela (ENSHHUG00000000983) #22	ENSHHUG00000001079	drap1 (ENSHHUG00000001155) #11	MAP3K11 (ENSHHUG00000001163) #25	ENSHHUG00000001192	ENSHHUG00000001209
Salmoninae_a	ANCESTRAL SPECIES	34	ENSGT00390000009210.f	ENSGT01040000240503.B.x.a.b	ENSGT00940000166995.c.b	ENSGT00390000004049.l.b	ENSGT00390000003738.a.a.h	ENSGT00940000159816.h	ENSGT00940000160688.l	ENSGT00950000183153.c.a.r.f	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00940000159305.o	ENSGT00930000151033.c	ENSGT00940000161268.j	ENSGT00940000154035.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154644.jb.a.a	ENSGT00940000159867.n #22	ENSGT00390000011640.h	ENSGT00390000012424.a.g #11	ENSGT00940000161064.f #25	ENSGT00940000163749.c.a	ENSGT00940000155978.a.a.yc.a	ENSGT00940000160483.k.b.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.e	ENSGT00510000049875	ENSGT00390000006979.a.f	ENSGT00950000183148.b.a.g.a.b	ENSGT00940000157258.d	ENSGT00940000164485.a.a.a	ENSGT00940000166658.b.e	ENSGT00390000014237.f
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	18	ENSGT00530000063882.b.mb.b	ENSGT01040000240503.B.x.a.b	ENSGT00940000166995.c.b	ENSGT00390000004049.l.b	ENSGT00390000003738.a.a.h	ENSGT00940000159816.h	ENSGT00940000160688.l	ENSGT00950000183153.c.a.r.f	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00940000159305.o	ENSGT00930000151033.c	ENSGT00940000161268.j	ENSGT00940000154035.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154644.jb.a.a	ENSGT00940000159867.n.a #22	ENSGT00390000011640.h	ENSGT00390000012424.a.g #11	ENSGT00940000161064.f #25	ENSGT00940000163749.c.a	ENSGT00940000155978.a.a.yc.a	ENSGT00940000160483.k.b.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.e	ENSGT00510000049875	ENSGT00390000006979.a.f	ENSGT00950000183148.b.a.g.a.b	ENSGT00940000157258.d	ENSGT00940000164485.a.a.a	ENSGT00940000166658.b.e	ENSGT00390000014237.f
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000080917	GBRAP (ENSSSAG00000080913)	ENSSSAG00000101618	GPS2 (ENSSSAG00000113040)	IF5A1 (ENSSSAG00000080906)	ybx2a (ENSSSAG00000080904)	SLC2A4 (ENSSSAG00000080757)	ENSSSAG00000107369	ENSSSAG00000110730	ENSSSAG00000003690	capgb (ENSSSAG00000080701)	ENSSSAG00000080678	ENSSSAG00000082400	ENSSSAG00000080654	ENSSSAG00000098177	rela (ENSSSAG00000080575) #22	ENSSSAG00000080638	zgc:63470 (ENSSSAG00000080559)	drap1 (ENSSSAG00000080557) #11	ENSSSAG00000103658 #25	ENSSSAG00000091770	ENSSSAG00000002870	ENSSSAG00000121366	rasgrp2 (ENSSSAG00000080445)	ENSSSAG00000080430	ENSSSAG00000080427	ENSSSAG00000080415	ENSSSAG00000080379	ENSSSAG00000080358	map4k2 (ENSSSAG00000080268)	men1 (ENSSSAG00000045698)
River trout	MODERN SPECIES	35	phf23b (ENSSTUG00000047669)	CTDNEP1 (ENSSTUG00000047625)	gabarapb (ENSSTUG00000047619)	GPS2 (ENSSTUG00000047598)	ENSSTUG00000047586	YBX2 (ENSSTUG00000047576)	SLC2A4 (ENSSTUG00000047426)	ENSSTUG00000047410	ENSSTUG00000047403	capgb (ENSSTUG00000047391)	POLR2A (ENSSTUG00000047363)	ENSSTUG00000047359	ENSSTUG00000047350	ENSSTUG00000047342	ENSSTUG00000047183	rela (ENSSTUG00000047129) #22	rela (ENSSTUG00000047072) #22	ENSSTUG00000047046	drap1 (ENSSTUG00000047028) #11	MAP3K11 (ENSSTUG00000046999) #25	ENSSTUG00000046980	NRXN2 (ENSSTUG00000046957)	ENSSTUG00000046951	RASGRP2 (ENSSTUG00000046926)	ALPK1 (ENSSTUG00000046864)	ENSSTUG00000046837	cskmt (ENSSTUG00000046828)	otub1b (ENSSTUG00000046772)	pygmb (ENSSTUG00000046145)	sf1 (ENSSTUG00000046027)	rbm4.1 (ENSSTUG00000046013)
Salmo	ANCESTRAL SPECIES	678																ENSGT00940000159867.n.b #22	ENSGT01000000221816
River trout	MODERN SPECIES	35	CTDNEP1 (ENSSTUG00000047625)	gabarapb (ENSSTUG00000047619)	GPS2 (ENSSTUG00000047598)	ENSSTUG00000047586	YBX2 (ENSSTUG00000047576)	SLC2A4 (ENSSTUG00000047426)	ENSSTUG00000047410	ENSSTUG00000047403	capgb (ENSSTUG00000047391)	POLR2A (ENSSTUG00000047363)	ENSSTUG00000047359	ENSSTUG00000047350	ENSSTUG00000047342	ENSSTUG00000047183	rela (ENSSTUG00000047129) #22	rela (ENSSTUG00000047072) #22	ENSSTUG00000047046	drap1 (ENSSTUG00000047028) #11	MAP3K11 (ENSSTUG00000046999) #25	ENSSTUG00000046980	NRXN2 (ENSSTUG00000046957)	ENSSTUG00000046951	RASGRP2 (ENSSTUG00000046926)	ALPK1 (ENSSTUG00000046864)	ENSSTUG00000046837	cskmt (ENSSTUG00000046828)	otub1b (ENSSTUG00000046772)	pygmb (ENSSTUG00000046145)	sf1 (ENSSTUG00000046027)	rbm4.1 (ENSSTUG00000046013)	map4k2 (ENSSTUG00000045144)
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT00390000009210.f	ENSGT01040000240503.B.x.a.b	ENSGT00940000166995.c.b	ENSGT00390000004049.l.b	ENSGT00390000003738.a.a.h	ENSGT00940000159816.h	ENSGT00940000160688.l	ENSGT00950000183153.c.a.r.f	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00940000159305.o	ENSGT00930000151033.c	ENSGT00940000161268.j	ENSGT00940000154035.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154644.jb.a.a	ENSGT00940000159867.n #22	ENSGT00390000011640.h	ENSGT00390000012424.a.g #11	ENSGT00940000161064.f #25	ENSGT00940000163749.c.a	ENSGT00940000155978.a.a.yc.a	ENSGT00940000160483.k.b.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.e	ENSGT00510000049875	ENSGT00390000006979.a.f	ENSGT00950000183148.b.a.g.a.b	ENSGT00940000168082	ENSGT00940000164485.a.a.a	ENSGT00940000164485.a.b	ENSGT00940000166658.b.e
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT00390000009210.f	ENSGT01040000240503.B.x.a.b	ENSGT00940000166995.c.b	ENSGT00390000004049.l.b	ENSGT00390000003738.a.a.h	ENSGT00940000159816.h	ENSGT00940000160688.l	ENSGT00950000183153.c.a.r.f	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00940000159305.o	ENSGT00930000151033.c	ENSGT00940000161268.j	ENSGT00940000154035.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154644.jb.a.a	ENSGT00940000159867.n #22	ENSGT01000000221816	ENSGT00390000012424.a.g #11	ENSGT00940000161064.f #25	ENSGT00940000163749.c.a	ENSGT00940000155978.a.a.yc.a	ENSGT00940000160483.k.b.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.e	ENSGT00510000049875	ENSGT00390000006979.a.f	ENSGT00950000183148.b.a.g.a.b	ENSGT00940000168082	ENSGT00940000167937	ENSGT00940000164485.a.a.a	ENSGT00940000166658.b.e
Chinook salmon	MODERN SPECIES	1	elp5 (ENSOTSG00005001979)	ENSOTSG00005001982	gabarapb (ENSOTSG00005002008)	GPS2 (ENSOTSG00005002015)	ENSOTSG00005002152	YBX2 (ENSOTSG00005002158)	SLC2A4 (ENSOTSG00005002217)	ENSOTSG00005006987	ENSOTSG00005006988	capgb (ENSOTSG00005006989)	POLR2A (ENSOTSG00005006991)	ENSOTSG00005006995	ENSOTSG00005006996	SLC29A2 (ENSOTSG00005006998)	ENSOTSG00005007001	rela (ENSOTSG00005008273) #22	ENSOTSG00005008276	drap1 (ENSOTSG00005008277) #11	MAP3K11 (ENSOTSG00005008279) #25	ENSOTSG00005008280	ENSOTSG00005008281	ENSOTSG00005008284	NRXN2 (ENSOTSG00005008292)	ENSOTSG00005008375	RASGRP2 (ENSOTSG00005008378)	ALPK1 (ENSOTSG00005008385)	epdl1 (ENSOTSG00005008390)	cskmt (ENSOTSG00005008421)	otub1b (ENSOTSG00005008424)	pygmb (ENSOTSG00005008439)	ENSOTSG00005008479
Coho salmon	MODERN SPECIES	7	ENSOKIG00005025816	CTDNEP1 (ENSOKIG00005025882)	ENSOKIG00005025902	GPS2 (ENSOKIG00005025930)	ENSOKIG00005026062	YBX2 (ENSOKIG00005026098)	SLC2A4 (ENSOKIG00005026212)	ENSOKIG00005028803	ENSOKIG00005028809	capgb (ENSOKIG00005028821)	POLR2A (ENSOKIG00005028872)	ENSOKIG00005028922	ENSOKIG00005028931	ENSOKIG00005028957	ENSOKIG00005029040	rela (ENSOKIG00005029154) #22	ENSOKIG00005029306	drap1 (ENSOKIG00005029318) #11	MAP3K11 (ENSOKIG00005029344) #25	ENSOKIG00005029389	ENSOKIG00005029395	ENSOKIG00005029415	ENSOKIG00005029426	RASGRP2 (ENSOKIG00005029448)	ALPK1 (ENSOKIG00005029538)	ENSOKIG00005029556	cskmt (ENSOKIG00005029568)	OTUB1 (ENSOKIG00005029576)	PYGM (ENSOKIG00005029655)	ENSOKIG00005029844	ENSOKIG00005029937
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000006867	GPS2 (ENSOMYG00000006971)	ENSOMYG00000007069	YBX2 (ENSOMYG00000007145)	SLC2A4 (ENSOMYG00000007738)	ENSOMYG00000008249	ENSOMYG00000008299	capgb (ENSOMYG00000008363)	ENSOMYG00000008585	ENSOMYG00000062841	ENSOMYG00000008724	ENSOMYG00000060402	ENSOMYG00000008807	ENSOMYG00000068872	ENSOMYG00000008999	rela (ENSOMYG00000009183) #22	zgc:63470 (ENSOMYG00000009212)	drap1 (ENSOMYG00000009261) #11	ENSOMYG00000009350 #25	ENSOMYG00000074351	ENSOMYG00000009395	ENSOMYG00000063662	ENSOMYG00000077566	ENSOMYG00000074905	ENSOMYG00000009455	ENSOMYG00000060030	ENSOMYG00000009699	ENSOMYG00000069818	ENSOMYG00000009788	ENSOMYG00000009824	ENSOMYG00000009840
Northern pike	MODERN SPECIES	23	EIF5AL1 (ENSELUG00000027866)	YBX2 (ENSELUG00000014487)	SLC2A4 (ENSELUG00000000529)	TP53 (ENSELUG00000014436)	ENSELUG00000034142	ENSELUG00000014354	ENSELUG00000014343	capgb (ENSELUG00000014302)	POLR2A (ENSELUG00000014284)	ENSELUG00000014212	ENSELUG00000014170	ugt2a5 (ENSELUG00000000516)	ENSELUG00000034692	SLC29A2 (ENSELUG00000014061)	ENSELUG00000013965	rela (ENSELUG00000013915) #22	zgc:63470 (ENSELUG00000013893)	drap1 (ENSELUG00000013878) #11	MAP3K11 (ENSELUG00000013820) #25	ENSELUG00000013710	NRXN2 (ENSELUG00000013764)	RASGRP2 (ENSELUG00000000505)	ALPK1 (ENSELUG00000013554)	ENSELUG00000013408	cskmt (ENSELUG00000013394)	otub1 (ENSELUG00000013376)	ENSELUG00000013310	pygmb (ENSELUG00000013289)	sf1 (ENSELUG00000013225)	rbm4.1 (ENSELUG00000013205)	rbm4.2 (ENSELUG00000030301)
Acanthomorphata	ANCESTRAL SPECIES	100	ENSGT00390000012556	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Euacanthomorphacea	ANCESTRAL SPECIES	17	ENSGT00390000012556	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Percomorphaceae	ANCESTRAL SPECIES	18	ENSGT00390000012556	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Tiger tail seahorse	MODERN SPECIES	506	junbb (ENSHCOG00000009342)	rtbdn (ENSHCOG00000009346)	ENSHCOG00000009379	ENSHCOG00000009388	MAST1 (ENSHCOG00000009422)	ATG4D (ENSHCOG00000009439)	smarca4a (ENSHCOG00000009510)	ldlra (ENSHCOG00000009609)	kri1 (ENSHCOG00000009624)	spc24 (ENSHCOG00000009636)	s1pr5a (ENSHCOG00000009647)	SORCS2 (ENSHCOG00000009730)	ift57 (ENSHCOG00000009743)	SLC29A2 (ENSHCOG00000000638)	PPP1CB (ENSHCOG00000009767)	rela (ENSHCOG00000009779) #22	zgc:63470 (ENSHCOG00000009790)	drap1 (ENSHCOG00000009796) #11	MAP3K11 (ENSHCOG00000009802) #25	ENSHCOG00000009825	stk26 (ENSHCOG00000009843)	zgc:77880 (ENSHCOG00000009864)	tbc1d19 (ENSHCOG00000000630)	CCKAR (ENSHCOG00000009933)	RBPJ (ENSHCOG00000009992)	smim20 (ENSHCOG00000010007)	MAN2B2 (ENSHCOG00000010051)	ENSHCOG00000010073	ENSHCOG00000010087	tnfsf12 (ENSHCOG00000010105)	CHD3 (ENSHCOG00000010170)
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT01030000234978	ENSGT00940000174504.A	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00950000183067.a.a	ENSGT01030000234978	ENSGT00940000174504.A	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00940000168370	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Tetraodontidae	ANCESTRAL SPECIES	108	ENSGT00940000153395.a	ENSGT00940000155475.h	ENSGT00390000012556	ENSGT00940000168370	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640
Fugu	MODERN SPECIES	20	ENSTRUG00000031468	zcchc4 (ENSTRUG00000010046)	ENSTRUG00000026830	ABLIM2 (ENSTRUG00000009795)	AFAP1 (ENSTRUG00000009616)	SORCS2 (ENSTRUG00000009401)	ENSTRUG00000031866	grpel1 (ENSTRUG00000009322)	tada2b (ENSTRUG00000032822)	ENSTRUG00000009255	ENSTRUG00000029174	TBC1D14 (ENSTRUG00000020505)	kiaa0232 (ENSTRUG00000009220)	SLC29A2 (ENSTRUG00000008954)	ENSTRUG00000008801	rela (ENSTRUG00000008758) #22	zgc:63470 (ENSTRUG00000008748)	ANK2 (ENSTRUG00000008279)	ENSTRUG00000007602	PAQR9 (ENSTRUG00000021353)	ENSTRUG00000020393	frem1a (ENSTRUG00000006301)	ENSTRUG00000026405	tspan5a (ENSTRUG00000005732)	RAP1GDS1 (ENSTRUG00000005313)	sox19b (ENSTRUG00000005238)	ENSTRUG00000004533	ENSTRUG00000004287	PELI3 (ENSTRUG00000004047)	RCE1 (ENSTRUG00000003795)	acox3 (ENSTRUG00000002688)
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ptrh2 (ENSTNIG00000001658)	ENSTNIG00000003620	ENSTNIG00000003618	ENSTNIG00000003609	ENSTNIG00000003608	DTD2 (ENSTNIG00000001215)	cdc27 (ENSTNIG00000003599)	marchf5 (ENSTNIG00000003598)	ENSTNIG00000003596	ENSTNIG00000004553	ENSTNIG00000003587	trib3 (ENSTNIG00000003586)	rfng (ENSTNIG00000003585)	dcxr (ENSTNIG00000003584)	trhr2 (ENSTNIG00000003583)	rela (ENSTNIG00000003566) #22	ENSTNIG00000003565	scn5lab (ENSTNIG00000003563)	lipea (ENSTNIG00000003561)	ENSTNIG00000003560	tomm40l (ENSTNIG00000003559)	apoa4a (ENSTNIG00000003558)	alkbh1 (ENSTNIG00000003557)	ldah (ENSTNIG00000003556)	ENSTNIG00000003555	PRKD1 (ENSTNIG00000003554)	ENSTNIG00000003553	tmem41ab (ENSTNIG00000003552)	ENSTNIG00000003551	ENSTNIG00000003550	hlfa (ENSTNIG00000003545)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002219	ENSTNIG00000002220	SCAMP2 (ENSTNIG00000002221)	ENSTNIG00000002222	ENSTNIG00000001225	TULP3 (ENSTNIG00000011395)	ENSTNIG00000002224	ENSTNIG00000002225	utp4 (ENSTNIG00000002226)	ENSTNIG00000000933	ENSTNIG00000002227	ENSTNIG00000002228	ENSTNIG00000000964	mvp (ENSTNIG00000002229)	ENSTNIG00000002230	rela (ENSTNIG00000002231) #22	acat1 (ENSTNIG00000003288)	ENSTNIG00000002233	ENSTNIG00000014622	blmh (ENSTNIG00000002234)	ENSTNIG00000003312	ENSTNIG00000002235	ENSTNIG00000002236	gch2 (ENSTNIG00000000301)	rrp15 (ENSTNIG00000002237)	ENSTNIG00000002238	ENSTNIG00000001072	ENSTNIG00000002239	ENSTNIG00000002240	ENSTNIG00000001332	ENSTNIG00000002244
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00940000168370	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Ballan wrasse	MODERN SPECIES	258										TBC1D14 (ENSLBEG00000002460)	kiaa0232 (ENSLBEG00000002477)	ENSLBEG00000002509	S100P (ENSLBEG00000002518)	SLC29A2 (ENSLBEG00000002542)	ENSLBEG00000002571	rela (ENSLBEG00000002621) #22	zgc:63470 (ENSLBEG00000002653)	drap1 (ENSLBEG00000002667) #11	MAP3K11 (ENSLBEG00000002695) #25	ENSLBEG00000002744	ENSLBEG00000002780	ENSLBEG00000002793
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00940000168370	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Eupecaria_C	ANCESTRAL SPECIES	20	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	19	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000266235	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
European seabass	MODERN SPECIES	16	AFAP1 (ENSDLAG00005020819)	SORCS2 (ENSDLAG00005020908)	grpel1 (ENSDLAG00005028693)	tada2b (ENSDLAG00005034948)	ccdc96 (ENSDLAG00005022484)	ENSDLAG00005026719	ENSDLAG00005022490	ENSDLAG00005022497	TBC1D14 (ENSDLAG00005022527)	kiaa0232 (ENSDLAG00005023090)	S100P (ENSDLAG00005023088)	ENSDLAG00005023096	ENSDLAG00005023099	ENSDLAG00005023106	ENSDLAG00005023126	rela (ENSDLAG00005030281) #22	zgc:63470 (ENSDLAG00005026584)	ENSDLAG00005023190 #25	ENSDLAG00005023246	ENSDLAG00005024132	ENSDLAG00005024138	ENSDLAG00005024160	ENSDLAG00005024229	ENSDLAG00005031874	ENSDLAG00005024269	ENSDLAG00005029477	ENSDLAG00005024293	ndufs2 (ENSDLAG00005024309)	ENSDLAG00005024630	ENSDLAG00005028151	dock11 (ENSDLAG00005024860)
Large yellow croaker	MODERN SPECIES	485	zcchc4 (ENSLCRG00005010485)	ENSLCRG00005010519	ABLIM2 (ENSLCRG00005010545)	AFAP1 (ENSLCRG00005010556)	SORCS2 (ENSLCRG00005010899)	grpel1 (ENSLCRG00005013780)	tada2b (ENSLCRG00005013781)	ccdc96 (ENSLCRG00005013782)	ENSLCRG00005013784	TBC1D14 (ENSLCRG00005013912)	kiaa0232 (ENSLCRG00005014793)	ENSLCRG00005014795	S100P (ENSLCRG00005014798)	SLC29A2 (ENSLCRG00005014811)	ENSLCRG00005014889	rela (ENSLCRG00005015346) #22	zgc:63470 (ENSLCRG00005015354)	drap1 (ENSLCRG00005015357) #11	MAP3K11 (ENSLCRG00005015370) #25	ENSLCRG00005015372	NRXN2 (ENSLCRG00005015683)	ENSLCRG00005019702	RASGRP2 (ENSLCRG00005019705)	ALPK1 (ENSLCRG00005019751)	ENSLCRG00005019759	epdl1 (ENSLCRG00005019786)	cskmt (ENSLCRG00005019800)	otub1b (ENSLCRG00005019831)	ENSLCRG00005019913	ENSLCRG00005019914	ndufs2 (ENSLCRG00005019953)
Gilthead seabream	MODERN SPECIES	1	ENSSAUG00010021427	HTRA3 (ENSSAUG00010021434)	ENSSAUG00010021590	SORCS2 (ENSSAUG00010021598)	ENSSAUG00010021612	ENSSAUG00010021615	grpel1 (ENSSAUG00010021618)	tada2b (ENSSAUG00010021620)	ccdc96 (ENSSAUG00010021624)	ENSSAUG00010021627	TBC1D14 (ENSSAUG00010021637)	kiaa0232 (ENSSAUG00010021904)	S100P (ENSSAUG00010021905)	ENSSAUG00010021906	ENSSAUG00010021908	rela (ENSSAUG00010001308) #22	zgc:63470 (ENSSAUG00010001325)	drap1 (ENSSAUG00010001329) #11	ENSSAUG00010001340 #25	NRXN2 (ENSSAUG00010001511)	ENSSAUG00010003871	RASGRP2 (ENSSAUG00010003883)	ENSSAUG00010003906	ENSSAUG00010004025	ENSSAUG00010004302	cskmt (ENSSAUG00010004439)	otub1b (ENSSAUG00010004443)	ENSSAUG00010004725	ENSSAUG00010004731	NDUFS2 (ENSSAUG00010004779)	kirrel1a (ENSSAUG00010006684)
Perciformes	ANCESTRAL SPECIES	19	ENSGT00390000014725.r.a	ENSGT00950000182923.B.b	ENSGT01040000240444.A.a.b	ENSGT01030000234590.B.a.a.e.b	ENSGT00390000016193	ENSGT00940000153916.A.b	ENSGT00940000165992.a.a	ENSGT00940000153783.b.a.b	ENSGT00940000156309.B.h	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000003894
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00390000014725.r.a	ENSGT00950000182923.B.b	ENSGT01040000240444.A.a.b	ENSGT01030000234590.B.a.a.e.b	ENSGT00390000016193	ENSGT00940000153916.A.b	ENSGT00940000165992.a.a	ENSGT00940000153783.b.a.b	ENSGT00940000156309.B.h	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Pike perch	MODERN SPECIES	50	trappc14 (ENSSLUG00000011424)	gal3st4 (ENSSLUG00000011436)	ENSSLUG00000011443	tm4sf21b (ENSSLUG00000011454)	MBLAC1 (ENSSLUG00000011489)	mpdu1b (ENSSLUG00000011494)	sox19b (ENSSLUG00000011503)	eif4a1a (ENSSLUG00000011586)	senp3b (ENSSLUG00000012840)	ENSSLUG00000012850	TBC1D14 (ENSSLUG00000012924)	kiaa0232 (ENSSLUG00000013929)	S100P (ENSSLUG00000013933)	SLC29A2 (ENSSLUG00000013938)	PPP1CB (ENSSLUG00000013966)	rela (ENSSLUG00000014087) #22	zgc:63470 (ENSSLUG00000014105)	drap1 (ENSSLUG00000014110) #11	MAP3K11 (ENSSLUG00000014123) #25	ENSSLUG00000014139	NRXN2 (ENSSLUG00000014161)	ENSSLUG00000014260	ENSSLUG00000014264	sema6e (ENSSLUG00000014306)	ENSSLUG00000014422	ENSSLUG00000014427	ptpn23a (ENSSLUG00000014444)	SCAP (ENSSLUG00000014552)	elp6 (ENSSLUG00000014707)	CSPG5 (ENSSLUG00000014715)	ENSSLUG00000014788
Channel bull blenny	MODERN SPECIES	9	gal3st4 (ENSCGOG00000011353)	ENSCGOG00000011351	tm4sf21b (ENSCGOG00000011335)	MBLAC1 (ENSCGOG00000011333)	mpdu1b (ENSCGOG00000016213)	sox19b (ENSCGOG00000016210)	eif4a1a (ENSCGOG00000015060)	senp3b (ENSCGOG00000015001)	ENSCGOG00000014999	TBC1D14 (ENSCGOG00000013824)	kiaa0232 (ENSCGOG00000013792)	S100P (ENSCGOG00000013791)	SLC29A2 (ENSCGOG00000013569)	PPP1CB (ENSCGOG00000012574)	zgc:63470 (ENSCGOG00000012561)	rela (ENSCGOG00000012555) #22	drap1 (ENSCGOG00000012547) #11	MAP3K11 (ENSCGOG00000012539) #25	NRXN2 (ENSCGOG00000012266)	RASGRP2 (ENSCGOG00000012244)	ALPK1 (ENSCGOG00000012217)	ENSCGOG00000012214	ENSCGOG00000012212	cskmt (ENSCGOG00000012211)	otub1b (ENSCGOG00000012174)	ENSCGOG00000012166	ENSCGOG00000012164	ndufs2 (ENSCGOG00000011153)	kirrel1a (ENSCGOG00000010506)	ENSCGOG00000010495	ENSCGOG00000010494
Cottioidei	ANCESTRAL SPECIES	20	ENSGT00390000014725.r.a	ENSGT00950000182923.B.b	ENSGT01040000240444.A.a.b	ENSGT01030000234590.B.a.a.e.b	ENSGT00390000016193	ENSGT00940000153916.A.b	ENSGT00940000165992.a.a	ENSGT00940000153783.b.a.b	ENSGT00940000156309.B.h	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT00390000003894	ENSGT00390000009529	ENSGT00940000155795.f	ENSGT00910000145429
Lumpfish	MODERN SPECIES	9	zgc:101765 (ENSCLMG00005020490)	ENSCLMG00005020491	gpha2 (ENSCLMG00005020492)	ENSCLMG00005020495	PPP2R5B (ENSCLMG00005020499)	arl2 (ENSCLMG00005020507)	sox19b (ENSCLMG00005020513)	eif4a1a (ENSCLMG00005020514)	senp3b (ENSCLMG00005020868)	ENSCLMG00005001366	TBC1D14 (ENSCLMG00005001606)	kiaa0232 (ENSCLMG00005002569)	S100P (ENSCLMG00005002570)	SLC29A2 (ENSCLMG00005002572)	ENSCLMG00005002658	rela (ENSCLMG00005003299) #22	zgc:63470 (ENSCLMG00005003311)	drap1 (ENSCLMG00005003312) #11	ENSCLMG00005003313 #25	NRXN2 (ENSCLMG00005003316)	ENSCLMG00005003331	RASGRP2 (ENSCLMG00005003342)	epdl1 (ENSCLMG00005003505)	ENSCLMG00005003506	cskmt (ENSCLMG00005003508)	otub1b (ENSCLMG00005003516)	ENSCLMG00005003795	ENSCLMG00005003797	ndufs2 (ENSCLMG00005003802)	kirrel1a (ENSCLMG00005003896)	ENSCLMG00005003904
Stickleback	MODERN SPECIES	7	akt2l (ENSGACG00000020088)	ENSGACG00000020086	ENSGACG00000020084	MBLAC1 (ENSGACG00000020082)	mpdu1b (ENSGACG00000020078)	sox19b (ENSGACG00000020077)	eif4a1a (ENSGACG00000020072)	senp3b (ENSGACG00000020071)	ENSGACG00000020069	TBC1D14 (ENSGACG00000020066)	kiaa0232 (ENSGACG00000020063)	kiaa0232 (ENSGACG00000020062)	S100P (ENSGACG00000020061)	SLC29A2 (ENSGACG00000020057)	ENSGACG00000020043	rela (ENSGACG00000020039) #22	zgc:63470 (ENSGACG00000020038)	drap1 (ENSGACG00000020035) #11	MAP3K11 (ENSGACG00000020033) #25	NRXN2 (ENSGACG00000020030)	ENSGACG00000020029	ENSGACG00000020028	RASGRP2 (ENSGACG00000020027)	epdl1 (ENSGACG00000020024)	ENSGACG00000020023	cskmt (ENSGACG00000020022)	otub1b (ENSGACG00000020018)	ENSGACG00000020016	ndufs2 (ENSGACG00000020006)	kirrel1a (ENSGACG00000020005)	ENSGACG00000020003
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234978	ENSGT00940000174504.A	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Carangaria	ANCESTRAL SPECIES	20	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01040000242820	ENSGT01100000263473.a.b.g.a.a.b.b.b.b.b	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Carangaria_A	ANCESTRAL SPECIES	32		ENSGT01100000263473.a.b.g.a.a.b.b.b.b.b	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00950000183337	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Seriola	ANCESTRAL SPECIES	43						ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00940000155795.f	ENSGT00910000145429
Yellowtail amberjack	MODERN SPECIES	3150					ENSSLDG00000017747	SORCS2 (ENSSLDG00000017577)	grpel1 (ENSSLDG00000017544)	tada2b (ENSSLDG00000017525)	ENSSLDG00000017513	ccdc96 (ENSSLDG00000017486)	TBC1D14 (ENSSLDG00000017443)	kiaa0232 (ENSSLDG00000017413)	S100P (ENSSLDG00000017404)	SLC29A2 (ENSSLDG00000017385)	ENSSLDG00000017347	rela (ENSSLDG00000017303) #22	drap1 (ENSSLDG00000017261) #11	MAP3K11 (ENSSLDG00000017212) #25
Greater amberjack	MODERN SPECIES	69	gal3st4 (ENSSDUG00000017065)	trappc14 (ENSSDUG00000017079)	zanl (ENSSDUG00000017100)	SORCS2 (ENSSDUG00000017173)	grpel1 (ENSSDUG00000017327)	tada2b (ENSSDUG00000017344)	ccdc96 (ENSSDUG00000017355)	ENSSDUG00000017369	ENSSDUG00000017382	ENSSDUG00000017388	TBC1D14 (ENSSDUG00000017401)	kiaa0232 (ENSSDUG00000017437)	S100P (ENSSDUG00000017469)	SLC29A2 (ENSSDUG00000017482)	ENSSDUG00000017502	rela (ENSSDUG00000017532) #22	zgc:63470 (ENSSDUG00000017554)	drap1 (ENSSDUG00000017563) #11	MAP3K11 (ENSSDUG00000017588) #25	NRXN2 (ENSSDUG00000017669)	ENSSDUG00000017967	ENSSDUG00000017972	RASGRP2 (ENSSDUG00000017985)	ENSSDUG00000018081	cskmt (ENSSDUG00000018128)	otub1b (ENSSDUG00000018140)	ENSSDUG00000018150	ENSSDUG00000018170	kirrel1a (ENSSDUG00000018186)	ENSSDUG00000018246	ENSSDUG00000018260
Barramundi perch	MODERN SPECIES	51	ENSLCAG00010011349	ENSLCAG00010011347	grpel1 (ENSLCAG00010011343)	SORCS2 (ENSLCAG00010010507)	ENSLCAG00010010346	ENSLCAG00010010342	tada2b (ENSLCAG00010010338)	ENSLCAG00010010332	ENSLCAG00010010331	TBC1D14 (ENSLCAG00010010324)	kiaa0232 (ENSLCAG00010010319)	S100P (ENSLCAG00010010315)	ENSLCAG00010010313	SLC29A2 (ENSLCAG00010010306)	PPP1CB (ENSLCAG00010010234)	rela (ENSLCAG00010010220) #22	zgc:63470 (ENSLCAG00010010216)	drap1 (ENSLCAG00010010213) #11	MAP3K11 (ENSLCAG00010010208) #25	ENSLCAG00010010205	NRXN2 (ENSLCAG00010010046)	RASGRP2 (ENSLCAG00010009966)	ALPK1 (ENSLCAG00010009963)	ENSLCAG00010009958	cskmt (ENSLCAG00010009952)	otub1b (ENSLCAG00010009942)	ENSLCAG00010009936	ENSLCAG00010009933	ndufs2 (ENSLCAG00010009760)	kirrel1a (ENSLCAG00010009504)	ENSLCAG00010009446
Pleuronectoidei	ANCESTRAL SPECIES	17	ENSGT00940000168370	ENSGT00390000012556	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01040000242820	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f	ENSGT00910000145429
Turbot	MODERN SPECIES	16	ENSSMAG00000005212	ENSSMAG00000005288	ENSSMAG00000005321	ENSSMAG00000018908	ENSSMAG00000018903	ENSSMAG00000018871	frem1a (ENSSMAG00000018555)	ENSSMAG00000018526	tspan5a (ENSSMAG00000018453)	ENSSMAG00000018348	slc1a1 (ENSSMAG00000018285)	ENSSMAG00000018273	ENSSMAG00000031825	ENSSMAG00000002246	PP1cb (ENSSMAG00000002193)	rela (ENSSMAG00000014895) #22	zgc:63470 (ENSSMAG00000014883)	drap1 (ENSSMAG00000014839) #11	ENSSMAG00000014828 #25	ENSSMAG00000014652	ENSSMAG00000014821	ENSSMAG00000036175	ENSSMAG00000014071	ENSSMAG00000013984	ENSSMAG00000013974	ENSSMAG00000013937	ENSSMAG00000029734	ENSSMAG00000013920	ENSSMAG00000013908	ENSSMAG00000013901	ndufs2 (ENSSMAG00000032900)
Tongue sole	MODERN SPECIES		ENSCSEG00000019779	hnrnpc (ENSCSEG00000019769)	ndrg2 (ENSCSEG00000019755)	SORCS2 (ENSCSEG00000019732)	grpel1 (ENSCSEG00000019298)	tada2b (ENSCSEG00000019295)	ccdc96 (ENSCSEG00000019290)	ENSCSEG00000019288	TBC1D14 (ENSCSEG00000019274)	kiaa0232 (ENSCSEG00000019265)	S100P (ENSCSEG00000019261)	S100P (ENSCSEG00000019260)	ENSCSEG00000019257	SLC29A2 (ENSCSEG00000019253)	PPP1CB (ENSCSEG00000019248)	rela (ENSCSEG00000019238) #22	zgc:63470 (ENSCSEG00000019235)	drap1 (ENSCSEG00000019227) #11	MAP3K11 (ENSCSEG00000018972) #25	ENSCSEG00000018968	ENSCSEG00000018963	serpine1 (ENSCSEG00000018954)	AP1S1 (ENSCSEG00000018947)	ENSCSEG00000018943	RCE1 (ENSCSEG00000018936)	PELI3 (ENSCSEG00000018740)	ENSCSEG00000018732	ENSCSEG00000018606 #27	ENSCSEG00000018580	gal3st4 (ENSCSEG00000018579)	trappc14 (ENSCSEG00000018568)
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT00940000163911.a.a.b.a.a.a.b	ENSGT01030000234978	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000177832	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Zig-zag eel	MODERN SPECIES	9	ENSMAMG00000003482	SORCS2 (ENSMAMG00000003507)	grpel1 (ENSMAMG00000003658)	tada2b (ENSMAMG00000003674)	ccdc96 (ENSMAMG00000003712)	ENSMAMG00000025953	ENSMAMG00000024332	ENSMAMG00000003751	TBC1D14 (ENSMAMG00000003758)	kiaa0232 (ENSMAMG00000003775)	S100P (ENSMAMG00000026011)	ENSMAMG00000025378	ENSMAMG00000028030	ENSMAMG00000003823	ENSMAMG00000024283	rela (ENSMAMG00000003875) #22	zgc:63470 (ENSMAMG00000003915)	drap1 (ENSMAMG00000003926) #11	ENSMAMG00000003965 #25	ENSMAMG00000004007	ENSMAMG00000023009	ENSMAMG00000026249	ENSMAMG00000004095	ENSMAMG00000004262	ENSMAMG00000004210	ENSMAMG00000004277	ENSMAMG00000004291	ENSMAMG00000004313	ENSMAMG00000004319	ENSMAMG00000028058	ndufs2 (ENSMAMG00000027351)
Anabantoidei	ANCESTRAL SPECIES	22	ENSGT00950000183067.a.a	ENSGT00940000177569.b	ENSGT00940000163911.a.a.b.a.a.a.b	ENSGT01030000234978	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT01030000234819	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Climbing perch	MODERN SPECIES	9	ENSATEG00000020507	ENSATEG00000020461	SORCS2 (ENSATEG00000020390)	grpel1 (ENSATEG00000029995)	tada2b (ENSATEG00000028980)	ccdc96 (ENSATEG00000020333)	ENSATEG00000020313	ENSATEG00000020297	ENSATEG00000029963	ENSATEG00000020260	TBC1D14 (ENSATEG00000020180)	kiaa0232 (ENSATEG00000020142)	S100P (ENSATEG00000020133)	ENSATEG00000020120	ENSATEG00000020081	rela (ENSATEG00000020042) #22	zgc:63470 (ENSATEG00000020036)	drap1 (ENSATEG00000020031) #11	ENSATEG00000019991 #25	ENSATEG00000019983	ENSATEG00000019952	ENSATEG00000019889	ENSATEG00000019838	ENSATEG00000019848	ENSATEG00000019805	ENSATEG00000019719	ENSATEG00000019700	ENSATEG00000019674	ENSATEG00000019650	ENSATEG00000019639	ndufs2 (ENSATEG00000019620)
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000023718	ENSBSLG00000023707	ENSBSLG00000023675	ENSBSLG00000023664	ENSBSLG00000023638	ENSBSLG00000023603	ENSBSLG00000023595	ENSBSLG00000023590	TBC1D14 (ENSBSLG00000023306)	kiaa0232 (ENSBSLG00000023282)	S100P (ENSBSLG00000023271)	ENSBSLG00000023266	ENSBSLG00000023259	ENSBSLG00000023170	ENSBSLG00000022973	rela (ENSBSLG00000022881) #22	zgc:63470 (ENSBSLG00000022856)	drap1 (ENSBSLG00000022831) #11	MAP3K11 (ENSBSLG00000022808) #25	NRXN2 (ENSBSLG00000021456)	ENSBSLG00000021367	ENSBSLG00000021268	RASGRP2 (ENSBSLG00000021093)	ALPK1 (ENSBSLG00000020208)	ENSBSLG00000020156	epdl1 (ENSBSLG00000020052)	ENSBSLG00000019957	cskmt (ENSBSLG00000019950)	otub1b (ENSBSLG00000019823)	ENSBSLG00000019772	ndufs2 (ENSBSLG00000019392)
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00950000183067.a.a	ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Atherinomorphae	ANCESTRAL SPECIES	49			ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Cyprinodontiformes	ANCESTRAL SPECIES	39			ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.h #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f
Aplocheiloidei	ANCESTRAL SPECIES	166				ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.h #25
Mangrove rivulus	MODERN SPECIES	63			ENSKMAG00000003292	SORCS2 (ENSKMAG00000003327)	ENSKMAG00000003480	grpel1 (ENSKMAG00000003503)	tada2b (ENSKMAG00000003540)	ccdc96 (ENSKMAG00000003559)	ENSKMAG00000003578	TBC1D14 (ENSKMAG00000003592)	kiaa0232 (ENSKMAG00000003615)	S100P (ENSKMAG00000003636)	ENSKMAG00000003687	ENSKMAG00000003706	ENSKMAG00000003725	rela (ENSKMAG00000003774) #22	zgc:63470 (ENSKMAG00000003796)	drap1 (ENSKMAG00000003806) #11	ENSKMAG00000003835 #25	ENSKMAG00000003885	ENSKMAG00000003946	ENSKMAG00000003965	ENSKMAG00000003988	RASGRP2 (ENSKMAG00000004070)	ENSKMAG00000004167	epdl1 (ENSKMAG00000004233)	ENSKMAG00000004240	ENSKMAG00000004249	cskmt (ENSKMAG00000004256)	otub1b (ENSKMAG00000004270)	ENSKMAG00000004321
Turquoise killifish	MODERN SPECIES	1613	FGB (ENSNFUG00015003471)	ENSNFUG00015003457	ENSNFUG00015003456	ENSNFUG00015003453	ENSNFUG00015003447	ENSNFUG00015003441	ENSNFUG00015003415	SORCS2 (ENSNFUG00015003340)	GRPEL1 (ENSNFUG00015003293)	TADA2B (ENSNFUG00015003287)	ccdc96 (ENSNFUG00015003283)	ENSNFUG00015003281	KIAA0232 (ENSNFUG00015003274)	nectin1a (ENSNFUG00015003260)	PPP1CB (ENSNFUG00015003236)	RELA (ENSNFUG00015003199) #22	drap1 (ENSNFUG00015003176) #11	MAP3K11 (ENSNFUG00015003163) #25	zgc:63470 (ENSNFUG00015003158)	ENSNFUG00015003148
Cyprinodontoidei	ANCESTRAL SPECIES	50			ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00950000183337	ENSGT00940000176978.a	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.g #25	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.h #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a
Poeciliinae	ANCESTRAL SPECIES	40				ENSGT01100000266351	ENSGT00940000176978.b.a.a.a	ENSGT00940000176978.a.b	ENSGT00940000176978.b.b	ENSGT00940000176978.a.a	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.g #25	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.h #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a
Poecilia	ANCESTRAL SPECIES	40				ENSGT01100000266351	ENSGT00940000176978.b.a.a.a	ENSGT00940000176978.a.b	ENSGT00940000176978.b.b	ENSGT00940000176978.a.a	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.g #25	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.h #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a
NAME_6	ANCESTRAL SPECIES	37	ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000176978.a.b	ENSGT00940000176978.b.b	ENSGT00940000176978.a.a	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.g #25	ENSGT00940000161064.h #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a
Amazon molly	MODERN SPECIES	324	SORCS2 (ENSPFOG00000010700)	grpel1 (ENSPFOG00000010621)	tada2b (ENSPFOG00000010609)	ENSPFOG00000010597	ENSPFOG00000010581	ENSPFOG00000023407	ENSPFOG00000010574	ENSPFOG00000010566	TBC1D14 (ENSPFOG00000010338)	kiaa0232 (ENSPFOG00000010281)	S100P (ENSPFOG00000010270)	ENSPFOG00000022978	SLC29A2 (ENSPFOG00000010057)	ENSPFOG00000009941	zgc:63470 (ENSPFOG00000020764)	rela (ENSPFOG00000009881) #22	drap1 (ENSPFOG00000009825) #11	ENSPFOG00000024836 #25	MAP3K11 (ENSPFOG00000009712) #25	ENSPFOG00000023560	NRXN2 (ENSPFOG00000009439)	ENSPFOG00000009425	RASGRP2 (ENSPFOG00000009173)	ALPK1 (ENSPFOG00000009067)	ENSPFOG00000009033	ENSPFOG00000009028	epdl1 (ENSPFOG00000008977)	cskmt (ENSPFOG00000020763)	otub1b (ENSPFOG00000008913)	ENSPFOG00000023699	ndufs2 (ENSPFOG00000008814)
Sailfin molly	MODERN SPECIES	2340															ENSPLAG00000003375	rela (ENSPLAG00000003389) #22	zgc:63470 (ENSPLAG00000003399)	drap1 (ENSPLAG00000003408) #11	ENSPLAG00000003417 #25
Guppy	MODERN SPECIES	448	ACO1 (ENSPREG00000021791)	PAQR9 (ENSPREG00000021816)	ENSPREG00000021823	ENSPREG00000021829	ENSPREG00000021842	ENSPREG00000021854	ENSPREG00000021859	ENSPREG00000021864	TBC1D14 (ENSPREG00000021882)	kiaa0232 (ENSPREG00000021904)	S100P (ENSPREG00000021912)	ENSPREG00000021921	ENSPREG00000021925	SLC29A2 (ENSPREG00000021932)	PPP1CB (ENSPREG00000021947)	rela (ENSPREG00000021967) #22	zgc:63470 (ENSPREG00000021977)	drap1 (ENSPREG00000021987) #11	MAP3K11 (ENSPREG00000022005) #25	ENSPREG00000022028	ENSPREG00000022040	ENSPREG00000022053	ENSPREG00000022074	ENSPREG00000022083	RASGRP2 (ENSPREG00000022093)	ENSPREG00000000571	ALPK1 (ENSPREG00000000599)	ENSPREG00000000667	ENSPREG00000000696	epdl1 (ENSPREG00000000739)	cskmt (ENSPREG00000000773)
Platyfish	MODERN SPECIES	5	ENSXMAG00000029584	ENSXMAG00000026165	ENSXMAG00000025088	ENSXMAG00000021173	ENSXMAG00000029769	ENSXMAG00000025443	ENSXMAG00000028322	ENSXMAG00000026081	ENSXMAG00000024416	TBC1D14 (ENSXMAG00000011398)	kiaa0232 (ENSXMAG00000011409)	S100P (ENSXMAG00000011414)	ENSXMAG00000025499	SLC29A2 (ENSXMAG00000004984)	ENSXMAG00000011416	rela (ENSXMAG00000011436) #22	zgc:63470 (ENSXMAG00000019661)	drap1 (ENSXMAG00000011441) #11	MAP3K11 (ENSXMAG00000011458) #25	ENSXMAG00000026952	NRXN2 (ENSXMAG00000011471)	ENSXMAG00000023855	ENSXMAG00000019662	RASGRP2 (ENSXMAG00000011474)	ALPK1 (ENSXMAG00000011532)	ENSXMAG00000028079	ENSXMAG00000011537	cskmt (ENSXMAG00000020830)	epdl1 (ENSXMAG00000029180)	otub1b (ENSXMAG00000024606)	ENSXMAG00000011569
NAME_4	ANCESTRAL SPECIES	242				ENSGT01030000234978.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000176978.a	ENSGT00940000171869.C	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064.h #25	ENSGT00940000154292.a.b.c.a
Mummichog	MODERN SPECIES	2187									ENSFHEG00000021962	ENSFHEG00000000719	TBC1D14 (ENSFHEG00000022064)	kiaa0232 (ENSFHEG00000022089)	S100P (ENSFHEG00000022104)	SLC29A2 (ENSFHEG00000022110)	ENSFHEG00000022150	rela (ENSFHEG00000022166) #22	zgc:63470 (ENSFHEG00000022177)	ENSFHEG00000022194	ENSFHEG00000022205	ENSFHEG00000022226	ENSFHEG00000022244	ENSFHEG00000022263	ENSFHEG00000022280	ENSFHEG00000022296	RASGRP2 (ENSFHEG00000022431)	ALPK1 (ENSFHEG00000022485)	ENSFHEG00000022501	ENSFHEG00000022513	epdl1 (ENSFHEG00000022520)	cskmt (ENSFHEG00000022529)	otub1b (ENSFHEG00000022545)
Sheepshead minnow	MODERN SPECIES	174													SLC29A2 (ENSCVAG00000023300)	ENSCVAG00000023324	zgc:63470 (ENSCVAG00000023330)	rela (ENSCVAG00000023334) #22	drap1 (ENSCVAG00000002854) #11	ENSCVAG00000002870 #25	ENSCVAG00000002891	NRXN2 (ENSCVAG00000002944)	ENSCVAG00000002955
Oryzias	ANCESTRAL SPECIES	42	ENSGT00940000157318	ENSGT00950000183337	ENSGT01100000263482.F	ENSGT01050000245225.A	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00940000162676.a.b.b.b.a.f.a.b	ENSGT00950000182968.d.a.a.a.d.b.a.a.a.a.b	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000170561.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120
Oryzias_b	ANCESTRAL SPECIES	37	ENSGT00950000183337	ENSGT01100000263482.F	ENSGT01050000245225.B	ENSGT01050000245225.A	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT00940000177059	ENSGT00940000162676.a.b.b.b.a.f.a.b	ENSGT00940000162676.a.b.b.b.a.e.b.a.b	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000170561.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120
Javanese ricefish	MODERN SPECIES	9	ENSOJAG00000003364	ENSOJAG00000003353	TBC1D14 (ENSOJAG00000003223)	kiaa0232 (ENSOJAG00000003188)	S100P (ENSOJAG00000003182)	ENSOJAG00000003168	ENSOJAG00000003162	ENSOJAG00000003159	ENSOJAG00000003147	ENSOJAG00000003072	mtmr1a (ENSOJAG00000002642)	ENSOJAG00000002571	ENSOJAG00000002560	SLC29A2 (ENSOJAG00000002534)	ENSOJAG00000002441	rela (ENSOJAG00000002383) #22	zgc:63470 (ENSOJAG00000002372)	drap1 (ENSOJAG00000002363) #11	MAP3K11 (ENSOJAG00000002323) #25	ENSOJAG00000002311	ENSOJAG00000002261	NRXN2 (ENSOJAG00000002233)	ENSOJAG00000002215	RASGRP2 (ENSOJAG00000002097)	ENSOJAG00000002011	ENSOJAG00000024133	ENSOJAG00000024132	ENSOJAG00000024131	cskmt (ENSOJAG00000024130)	otub1b (ENSOJAG00000024129)	ENSOJAG00000024128
Indian medaka	MODERN SPECIES	19	ENSOMEG00000003506	ENSOMEG00000003520	TBC1D14 (ENSOMEG00000003583)	kiaa0232 (ENSOMEG00000003609)	S100P (ENSOMEG00000003620)	ENSOMEG00000003650	ENSOMEG00000003664	ENSOMEG00000003678	ENSOMEG00000000939	ENSOMEG00000003716	mtmr1a (ENSOMEG00000003763)	ENSOMEG00000003774	ENSOMEG00000003782	ENSOMEG00000003816	PPP1CB (ENSOMEG00000003852)	rela (ENSOMEG00000003881) #22	zgc:63470 (ENSOMEG00000000837)	drap1 (ENSOMEG00000003893) #11	MAP3K11 (ENSOMEG00000000090) #25	ENSOMEG00000003929	ENSOMEG00000003941	NRXN2 (ENSOMEG00000004004)	ENSOMEG00000004029	ENSOMEG00000004074	ENSOMEG00000004085	ENSOMEG00000004092	ENSOMEG00000004113	ENSOMEG00000004123	ENSOMEG00000004138	ENSOMEG00000004145	ENSOMEG00000004161
Oryzias_a	ANCESTRAL SPECIES	66	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00950000183337	ENSGT01050000245225.A.b	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.f	ENSGT00940000162676.a.b.b.b.a.f.a.b.a	ENSGT00950000182968.d.a.a.a.d.b.a.a.a.a.b	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000170561.b	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640.f	ENSGT00390000011640.e	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c.c	ENSGT00940000164430.a.b.a.c.d.b	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.d.a	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a
Japanese Medaka HdrR	MODERN SPECIES	9	TBC1D14 (ENSORLG00000010724)	kiaa0232 (ENSORLG00000010733)	S100P (ENSORLG00000010744)	ENSORLG00000027057	ENSORLG00000020615	ENSORLG00000010749	ENSORLG00000010753	ENSORLG00000027589	ENSORLG00000030277	ENSORLG00000025391	ENSORLG00000024407	mtmr1a (ENSORLG00000010894)	ENSORLG00000029738	SLC29A2 (ENSORLG00000011065)	ENSORLG00000011100	rela (ENSORLG00000011104) #22	zgc:63470 (ENSORLG00000011109)	zgc:63470 (ENSORLG00000026406)	drap1 (ENSORLG00000011115) #11	ENSORLG00000011136 #25	ENSORLG00000011144	ENSORLG00000022292	ENSORLG00000011183	ENSORLG00000022368	RASGRP2 (ENSORLG00000012389)	ENSORLG00000022901	ENSORLG00000012361	ENSORLG00000025308	ENSORLG00000011204	ENSORLG00000012350	ENSORLG00000027363
Chinese medaka	MODERN SPECIES	850														SLC29A2 (ENSOSIG00000002521)	ENSOSIG00000001136	rela (ENSOSIG00000001123) #22	drap1 (ENSOSIG00000001059) #11	MAP3K11 (ENSOSIG00000001051) #25
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.B	ENSGT00940000171869.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT01100000263983	ENSGT00940000162871	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Pomacentridae	ANCESTRAL SPECIES	28								ENSGT00940000171869.B	ENSGT00940000171869.A	ENSGT00940000157250.g	ENSGT00940000157250.h	ENSGT00390000018549	ENSGT00940000162871	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Pomacentridae_A	ANCESTRAL SPECIES	22	ENSGT01100000263473.a.b.g.a.a.b.b.b.b.b	ENSGT01030000234563.b.a.a	ENSGT00950000183712	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT01100000263482.F	ENSGT00940000171869.B	ENSGT00940000171869.A	ENSGT00940000157250.g	ENSGT00940000157250.h	ENSGT00390000018549	ENSGT00940000162871.j	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Amphiprion	ANCESTRAL SPECIES	43							ENSGT00940000182403	ENSGT00940000171869.B	ENSGT00940000171869.A.d	ENSGT00940000171869.A.c	ENSGT00940000157250.h	ENSGT00390000018549	ENSGT00940000162871.j	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Orange clownfish	MODERN SPECIES	15	ENSAPEG00000015639	SORCS2 (ENSAPEG00000015665)	ENSAPEG00000015787	grpel1 (ENSAPEG00000015805)	tada2b (ENSAPEG00000015831)	ccdc96 (ENSAPEG00000015858)	ENSAPEG00000015881	ENSAPEG00000015901	ENSAPEG00000015915	ENSAPEG00000015919	TBC1D14 (ENSAPEG00000015933)	kiaa0232 (ENSAPEG00000015980)	S100P (ENSAPEG00000016017)	SLC29A2 (ENSAPEG00000016030)	ENSAPEG00000016060	rela (ENSAPEG00000016091) #22	zgc:63470 (ENSAPEG00000016099)	drap1 (ENSAPEG00000016121) #11	ENSAPEG00000016155 #25	ENSAPEG00000016217	ENSAPEG00000016282	ENSAPEG00000016295	ENSAPEG00000016347	RASGRP2 (ENSAPEG00000016380)	ENSAPEG00000016456	ALPK1 (ENSAPEG00000016466)	ENSAPEG00000016509	ENSAPEG00000016521	cskmt (ENSAPEG00000016534)	otub1b (ENSAPEG00000016546)	ENSAPEG00000016571
Clown anemonefish	MODERN SPECIES	2240								ENSAOCG00000022673	ENSAOCG00000022664	ENSAOCG00000022657	TBC1D14 (ENSAOCG00000022654)	kiaa0232 (ENSAOCG00000022640)	S100P (ENSAOCG00000022623)	SLC29A2 (ENSAOCG00000022616)	ENSAOCG00000022601	rela (ENSAOCG00000022580) #22	zgc:63470 (ENSAOCG00000022569)	drap1 (ENSAOCG00000022551) #11	ENSAOCG00000002601 #25
Spiny chromis	MODERN SPECIES	969											ENSAPOG00000016428	kiaa0232 (ENSAPOG00000016498)	S100P (ENSAPOG00000016506)	SLC29A2 (ENSAPOG00000016519)	ENSAPOG00000016554	rela (ENSAPOG00000016563) #22	zgc:63470 (ENSAPOG00000016581)	drap1 (ENSAPOG00000016613) #11	ENSAPOG00000016663 #25
Bicolor damselfish	MODERN SPECIES	1153												kiaa0232 (ENSSPAG00000007382)	ENSSPAG00000007336	ENSSPAG00000007317	ENSSPAG00000007290	rela (ENSSPAG00000007249) #22	drap1 (ENSSPAG00000007215) #11	MAP3K11 (ENSSPAG00000007189) #25
Cichlidae	ANCESTRAL SPECIES	31	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A	ENSGT01100000263482.F	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT01100000263983	ENSGT00940000162871.g	ENSGT00940000177059	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Pseudocrenilabrinae	ANCESTRAL SPECIES	18	ENSGT00940000158971	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A	ENSGT01100000263482.F.l	ENSGT01100000263482.F.k	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT00940000162871.g	ENSGT00940000177059.g	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	23		ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A.g	ENSGT01100000263482.F.l	ENSGT01100000263482.F.k	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT00940000162871.g	ENSGT00940000177059.g	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f	ENSGT00910000145429
Haplochromini	ANCESTRAL SPECIES	28		ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A.g	ENSGT01100000263482.F.l	ENSGT01100000263482.F.k	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT00940000162871.g	ENSGT00940000177059.g	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529	ENSGT00940000155795.f	ENSGT00910000145429
Burton s mouthbrooder	MODERN SPECIES	402									TBC1D14 (ENSHBUG00000010544)	kiaa0232 (ENSHBUG00000010486)	S100P (ENSHBUG00000010469)	S100P (ENSHBUG00000010458)	ENSHBUG00000010405	ENSHBUG00000010389	ENSHBUG00000010372	rela (ENSHBUG00000010305) #22	zgc:63470 (ENSHBUG00000010267)	drap1 (ENSHBUG00000000268) #11	MAP3K11 (ENSHBUG00000010240) #25	NRXN2 (ENSHBUG00000010203)	ENSHBUG00000010143	RASGRP2 (ENSHBUG00000010124)	ALPK1 (ENSHBUG00000010000)	ENSHBUG00000009942	cskmt (ENSHBUG00000009964)	ENSHBUG00000009937	otub1b (ENSHBUG00000009905)	ENSHBUG00000009869	ENSHBUG00000009855	ndufs2 (ENSHBUG00000009829)	kirrel1a (ENSHBUG00000009748)
Haplochromini_A	ANCESTRAL SPECIES	62		ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A.g	ENSGT01100000263482.F.l	ENSGT01100000263482.F.k	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT00940000162871.g	ENSGT00940000177059.g	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT01030000234819	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
P. nyererei	MODERN SPECIES	409				SORCS2 (ENSPNYG00000019976)	grpel1 (ENSPNYG00000019949)	tada2b (ENSPNYG00000019931)	ccdc96 (ENSPNYG00000019918)	ENSPNYG00000019902	TBC1D14 (ENSPNYG00000019861)	kiaa0232 (ENSPNYG00000019845)	S100P (ENSPNYG00000019832)	S100P (ENSPNYG00000019702)	ENSPNYG00000019664	ENSPNYG00000019629	zgc:63470 (ENSPNYG00000019618)	rela (ENSPNYG00000019587) #22	drap1 (ENSPNYG00000019568) #11	MAP3K11 (ENSPNYG00000019544) #25	ENSPNYG00000019533	ENSPNYG00000019524	NRXN2 (ENSPNYG00000019318)	ENSPNYG00000019251	RASGRP2 (ENSPNYG00000019218)	ALPK1 (ENSPNYG00000019190)	ENSPNYG00000019177	ENSPNYG00000019163	cskmt (ENSPNYG00000019154)	otub1b (ENSPNYG00000019127)	ENSPNYG00000019111	ENSPNYG00000019098	ndufs2 (ENSPNYG00000019062)
Haplochromini_B	ANCESTRAL SPECIES	82		ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000171869.A.g	ENSGT01100000263482.F.l	ENSGT01100000263482.F.k	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871.h	ENSGT00940000162871.g	ENSGT00940000177059.g	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000154644.jb.a	ENSGT00940000159867 #22	ENSGT00390000011640	ENSGT00390000012424.a #11	ENSGT00940000161064 #25	ENSGT00940000163749	ENSGT00980000198573.a.b.y.b.b.a.b.a.a.b.b	ENSGT00940000155978.a.a	ENSGT00940000160483.k.b	ENSGT00940000159753	ENSGT00940000164430.a.b.a.c	ENSGT00940000164430.a.b.a.d	ENSGT00510000049875	ENSGT00390000006979.a	ENSGT00940000157535.m.a	ENSGT01090000260120	ENSGT00390000009529
Zebra mbuna	MODERN SPECIES	1106	rwdd (ENSMZEG00005009024)	mad2l1 (ENSMZEG00005008962)	ENSMZEG00005008944	ccdc96 (ENSMZEG00005008931)	tada2b (ENSMZEG00005008903)	grpel1 (ENSMZEG00005008885)	ENSMZEG00005008878	SORCS2 (ENSMZEG00005008816)	mad2l1 (ENSMZEG00005008797)	pde5ab (ENSMZEG00005008758)	ENSMZEG00005008738	zcchc4 (ENSMZEG00005008724)	ENSMZEG00005008709	ENSMZEG00005008662	ENSMZEG00005008610	rela (ENSMZEG00005008549) #22	zgc:63470 (ENSMZEG00005008532)	drap1 (ENSMZEG00005008517) #11	MAP3K11 (ENSMZEG00005008508) #25	ENSMZEG00005008498	ENSMZEG00005008482	NRXN2 (ENSMZEG00005008393)	ENSMZEG00005008357	RASGRP2 (ENSMZEG00005008308)	ENSMZEG00005008276	ENSMZEG00005008269	ENSMZEG00005008254	ENSMZEG00005008226	cskmt (ENSMZEG00005008208)	otub1b (ENSMZEG00005008193)	ENSMZEG00005008167
Eastern happy	MODERN SPECIES	15	ENSACLG00000012548	ENSACLG00000012493	ENSACLG00000012484	ENSACLG00000012461	ENSACLG00000012454	ENSACLG00000012438	TBC1D14 (ENSACLG00000012372)	kiaa0232 (ENSACLG00000012340)	S100P (ENSACLG00000012327)	S100P (ENSACLG00000012321)	ENSACLG00000012291	ENSACLG00000012228	ENSACLG00000012223	ENSACLG00000012177	zgc:63470 (ENSACLG00000012158)	rela (ENSACLG00000012132) #22	drap1 (ENSACLG00000012111) #11	MAP3K11 (ENSACLG00000012099) #25	ENSACLG00000012094	NRXN2 (ENSACLG00000011961)	ENSACLG00000011588	ENSACLG00000011581	RASGRP2 (ENSACLG00000011246)	ALPK1 (ENSACLG00000011218)	ENSACLG00000011191	ENSACLG00000011183	cskmt (ENSACLG00000011174)	otub1b (ENSACLG00000011155)	ENSACLG00000011130	ENSACLG00000011118	ndufs2 (ENSACLG00000011084)
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	718																rela (ENSNBRG00000019689) #22	zgc:63470 (ENSNBRG00000019736)	drap1 (ENSNBRG00000019744) #11
Lyretail cichlid	MODERN SPECIES	383				SORCS2 (ENSNBRG00000011075)	grpel1 (ENSNBRG00000011220)	tada2b (ENSNBRG00000011228)	ccdc96 (ENSNBRG00000011241)	ENSNBRG00000011259	ENSNBRG00000011286	TBC1D14 (ENSNBRG00000011298)	kiaa0232 (ENSNBRG00000011338)	S100P (ENSNBRG00000011347)	S100P (ENSNBRG00000011395)	ENSNBRG00000011541	ENSNBRG00000011559	rela (ENSNBRG00000011601) #22	zgc:63470 (ENSNBRG00000011689)	drap1 (ENSNBRG00000011701) #11	MAP3K11 (ENSNBRG00000011726) #25	NRXN2 (ENSNBRG00000011787)	ENSNBRG00000011990	ENSNBRG00000012001	ENSNBRG00000012028	epdl1 (ENSNBRG00000012034)	ENSNBRG00000012044	cskmt (ENSNBRG00000012057)	otub1b (ENSNBRG00000012064)	ENSNBRG00000012080	ENSNBRG00000012104	ndufs2 (ENSNBRG00000012123)	kirrel1a (ENSNBRG00000012154)
Nile tilapia	MODERN SPECIES	15	SORCS2 (ENSONIG00000001509)	grpel1 (ENSONIG00000029457)	tada2b (ENSONIG00000034695)	ccdc96 (ENSONIG00000041207)	ENSONIG00000041596	ENSONIG00000036651	ENSONIG00000030427	ENSONIG00000038751	ENSONIG00000036736	TBC1D14 (ENSONIG00000001523)	kiaa0232 (ENSONIG00000001530)	S100P (ENSONIG00000001535)	S100P (ENSONIG00000001536)	ENSONIG00000038126	ENSONIG00000001540	rela (ENSONIG00000001545) #22	zgc:63470 (ENSONIG00000020958)	drap1 (ENSONIG00000001546) #11	MAP3K11 (ENSONIG00000001551) #25	ENSONIG00000041844	ENSONIG00000035511	ENSONIG00000030097	ENSONIG00000035842	NRXN2 (ENSONIG00000018327)	ENSONIG00000027534	STX12 (ENSONIG00000032914)	RASGRP2 (ENSONIG00000018329)	ENSONIG00000043115	epdl1 (ENSONIG00000037510)	ENSONIG00000018330	ALPK1 (ENSONIG00000035958)
Midas cichlid	MODERN SPECIES	1149					ENSACIG00000015760	ENSACIG00000015773	ENSACIG00000015784	TBC1D14 (ENSACIG00000015797)	kiaa0232 (ENSACIG00000015833)	ENSACIG00000015850	S100P (ENSACIG00000015860)	ENSACIG00000015869	S100P (ENSACIG00000015899)	SLC29A2 (ENSACIG00000015941)	ENSACIG00000015958	rela (ENSACIG00000015978) #22	zgc:63470 (ENSACIG00000015998)	drap1 (ENSACIG00000016012) #11	MAP3K11 (ENSACIG00000016033) #25	ENSACIG00000016070	ENSACIG00000016188
Pinecone sodierfish	MODERN SPECIES	9	alox12 (ENSMMDG00005008875)	ENSMMDG00005009001	ENSMMDG00005009005	rnaseka (ENSMMDG00005009009)	zgc:92664 (ENSMMDG00005009010)	ENSMMDG00005009014	ache (ENSMMDG00005009016)	ENSMMDG00005009018	NAT16 (ENSMMDG00005009025)	ENSMMDG00005009031	TBC1D14 (ENSMMDG00005009054)	kiaa0232 (ENSMMDG00005010040)	ENSMMDG00005010042	SLC29A2 (ENSMMDG00005010045)	ENSMMDG00005010148	rela (ENSMMDG00005010771) #22	zgc:63470 (ENSMMDG00005010895)	drap1 (ENSMMDG00005010899) #11	MAP3K11 (ENSMMDG00005010901) #25	ENSMMDG00005010905	ENSMMDG00005010908	ENSMMDG00005010909	RASGRP2 (ENSMMDG00005010911)	ENSMMDG00005010914	epdl1 (ENSMMDG00005010919)	epdl1 (ENSMMDG00005010921)	cskmt (ENSMMDG00005010922)	otub1b (ENSMMDG00005010923)	ENSMMDG00005010929	ENSMMDG00005010930	ndufs2 (ENSMMDG00005010958)
Cod	MODERN SPECIES	8	ENSGMOG00000031373	ENSGMOG00000033030	ENSGMOG00000036682	ENSGMOG00000029091	ppp1r14bb (ENSGMOG00000007061)	brms1 (ENSGMOG00000007053)	ENSGMOG00000028635	ENSGMOG00000028538	ENSGMOG00000026367	ENSGMOG00000029013	ENSGMOG00000023366	ENSGMOG00000018292	ENSGMOG00000018268	ENSGMOG00000014249	ENSGMOG00000014228	rela (ENSGMOG00000016783) #22	zgc:63470 (ENSGMOG00000020392)	drap1 (ENSGMOG00000016768) #11	ENSGMOG00000003592 #25	ENSGMOG00000011867	ENSGMOG00000028602	ENSGMOG00000011473	ENSGMOG00000011438	ENSGMOG00000011396	ENSGMOG00000024903	ENSGMOG00000019668	ankrd46b (ENSGMOG00000026423)	ENSGMOG00000024150	col4a5 (ENSGMOG00000004625)	ENSGMOG00000032493	gc2 (ENSGMOG00000013666)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	487																ENSGT00940000159867.s #22	ENSGT00390000012424.a.a #11	ENSGT00940000156392.b	ENSGT00940000158735 #24	ENSGT00940000161064.c #25	ENSGT00940000155978.a.a.b
Asian bonytongue	MODERN SPECIES	19	pfdn2 (ENSSFOG00015028756)	six7 (ENSSFOG00015031088)	ENSSFOG00015020928	dpp3 (ENSSFOG00015020949)	ENSSFOG00015024744	ENSSFOG00015021013	GAL3ST3 (ENSSFOG00015021031)	actn3b (ENSSFOG00015021040)	pacs1a (ENSSFOG00015021082)	sf3b2 (ENSSFOG00015021125)	CAPN1 (ENSSFOG00015021141)	bbs1 (ENSSFOG00015021161)	cfbl (ENSSFOG00015021195)	SLC29A2 (ENSSFOG00015021337)	PPP1CB (ENSSFOG00015021367)	rela (ENSSFOG00015021380) #22	drap1 (ENSSFOG00015021405) #11	zgc:165604 (ENSSFOG00015021420)	PCNX3 (ENSSFOG00015021443) #24	MAP3K11 (ENSSFOG00015021499) #25	ENSSFOG00015024612	MAP3K11 (ENSSFOG00015024467) #25	ENSSFOG00015021551	NRXN2 (ENSSFOG00015021521)	RASGRP2 (ENSSFOG00015021580)	BRD8 (ENSSFOG00015021698)	dnajc18 (ENSSFOG00015021720)	ENSSFOG00015021741	ube2d2 (ENSSFOG00015021755)	CXXC5 (ENSSFOG00015028761)	ENSSFOG00015025909
P. kingsleyae	MODERN SPECIES	292											ENSPKIG00000019804	ENSPKIG00000019781	ENSPKIG00000019772	SLC29A2 (ENSPKIG00000019738)	PPP1CB (ENSPKIG00000019702)	rela (ENSPKIG00000019654) #22	drap1 (ENSPKIG00000019601) #11	zgc:165604 (ENSPKIG00000019572)	PCNX3 (ENSPKIG00000019514) #24	MAP3K11 (ENSPKIG00000019415) #25	ENSPKIG00000019365	ENSPKIG00000019347	NRXN2 (ENSPKIG00000019012)
Osteoglossiformes	ANCESTRAL SPECIES	492																ENSGT00940000159867.t #22	ENSGT00390000011640	ENSGT00390000012424.a.b #11	ENSGT00940000161064.d #25	ENSGT00940000163749	ENSGT00940000155978.a.a.a
P. kingsleyae	MODERN SPECIES	230																ENSPKIG00000007574 #22	zgc:63470 (ENSPKIG00000007550)	drap1 (ENSPKIG00000007478) #11	MAP3K11 (ENSPKIG00000007405) #25	ENSPKIG00000007374	NRXN2 (ENSPKIG00000007201)	ENSPKIG00000007105	ENSPKIG00000007089	ENSPKIG00000007075	RASGRP2 (ENSPKIG00000007043)	ENSPKIG00000007024	rbm4.3 (ENSPKIG00000007001)	pmt (ENSPKIG00000006894)	zgc:152774 (ENSPKIG00000006862)	ENSPKIG00000006845
Reedfish	MODERN SPECIES		fibpb (ENSECRG00000003219) #13	ENSECRG00000003237	efemp2a (ENSECRG00000003246) #15	npas4a (ENSECRG00000000390)	mrpl11 (ENSECRG00000000393)	ENSECRG00000000396	ENSECRG00000000397	sf3b2 (ENSECRG00000000403)	pacs1a (ENSECRG00000000414)	ENSECRG00000000425	ENSECRG00000000437	ENSECRG00000000448	bbs1 (ENSECRG00000000457)	ENSECRG00000000480	ENSECRG00000000616	rela (ENSECRG00000000703) #22	zgc:63470 (ENSECRG00000000714)	drap1 (ENSECRG00000000735) #11	PCNX3 (ENSECRG00000000755) #24	MAP3K11 (ENSECRG00000000795) #25	ENSECRG00000000815	nrxn2a (ENSECRG00000000834)	ENSECRG00000000880	ENSECRG00000000978	ENSECRG00000001078	RASGRP2 (ENSECRG00000001118)	pygmb (ENSECRG00000001247)	sf1 (ENSECRG00000001286)	ENSECRG00000001313	ENSECRG00000001333	rbm4.3 (ENSECRG00000001356)