Euteleostomi ANCESTRAL SPECIES 239 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00390000013995.b.a #19 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000173141 ENSGT00940000166028 ENSGT00940000164287 ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.a ENSGT00940000157877.a ENSGT00940000165995 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00390000009678 #32 ENSGT01050000244882.b.c.a ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.a ENSGT00940000174128.A ENSGT00940000166769 ENSGT00940000165995 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 Amniota ANCESTRAL SPECIES 22 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Mammalia ANCESTRAL SPECIES 18 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Theria ANCESTRAL SPECIES 28 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Eutheria ANCESTRAL SPECIES 14 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000162859 #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000162859 #22 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Glires ANCESTRAL SPECIES 2 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Rodentia ANCESTRAL SPECIES 2 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Chinese hamster chok1gshd MODERN SPECIES 144 Tmf1 (ENSCGRG00001018858) #7 Uba3 (ENSCGRG00001022490) #8 Arl6ip5 (ENSCGRG00001018813) #9 Lmod3 (ENSCGRG00001010389) #10 Frmd4b (ENSCGRG00001020840) #11 Mitf (ENSCGRG00001011883) #12 Mdfic2 (ENSCGRG00001018361) #13 Foxp1 (ENSCGRG00001015802) #14 Eif4e3 (ENSCGRG00001016500) #15 Gpr27 (ENSCGRG00001001036) #16 Prok2 (ENSCGRG00001020805) #17 ENSCGRG00001005960 #18 Rybp (ENSCGRG00001020152) #19 Shq1 (ENSCGRG00001012583) #20 Gxylt2 (ENSCGRG00001012822) #21 Ppp4r2 (ENSCGRG00001010724) #22 Pdzrn3 (ENSCGRG00001017365) #23 ENSCGRG00001003940 #24 Cntn3 (ENSCGRG00001013551) #25 ENSCGRG00001015607 #26 ENSCGRG00001015306 #27 Chl1 (ENSCGRG00001021609) #28 Cntn6 (ENSCGRG00001012547) #29 Cntn4 (ENSCGRG00001005552) #30 Il5ra (ENSCGRG00001023890) #31 Trnt1 (ENSCGRG00001009998) #32 Crbn (ENSCGRG00001014850) #33 Lrrn1 (ENSCGRG00001000760) #34 ENSCGRG00001003904 #35 Setmar (ENSCGRG00001005415) #36 Sumf1 (ENSCGRG00001010527) #37 Golden Hamster MODERN SPECIES 643 Tmf1 (ENSMAUG00000021427) #7 Uba3 (ENSMAUG00000017525) #8 Arl6ip5 (ENSMAUG00000009657) #9 Lmod3 (ENSMAUG00000010204) #10 Frmd4b (ENSMAUG00000007225) #11 Mitf (ENSMAUG00000004545) #12 Mdfic2 (ENSMAUG00000012915) #13 Foxp1 (ENSMAUG00000022171) #14 Eif4e3 (ENSMAUG00000019824) #15 Gpr27 (ENSMAUG00000010831) #16 Prok2 (ENSMAUG00000007849) #17 Rybp (ENSMAUG00000010834) #19 ENSMAUG00000010991 Shq1 (ENSMAUG00000022030) #20 Gxylt2 (ENSMAUG00000021811) #21 Ppp4r2 (ENSMAUG00000010766) #22 Pdzrn3 (ENSMAUG00000007003) #23 Cntn3 (ENSMAUG00000010639) #25 Murinae ANCESTRAL SPECIES 4 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 Rat MODERN SPECIES 14 Arl6ip5 (ENSRNOG00000006818) #9 Lmod3 (ENSRNOG00000032443) #10 Frmd4b (ENSRNOG00000007764) #11 Mitf (ENSRNOG00000008658) #12 Mdfic2 (ENSRNOG00000064294) #13 Foxp1 (ENSRNOG00000009184) #14 Eif4e3 (ENSRNOG00000010301) #15 Gpr27 (ENSRNOG00000010880) #16 Ier3ip1-ps1 (ENSRNOG00000030004) Prok2 (ENSRNOG00000010898) #17 LOC120102174 (ENSRNOG00000033673) LOC120102351 (ENSRNOG00000005353) #19 Shq1 (ENSRNOG00000005433) #20 Actg1-ps9 (ENSRNOG00000062691) Gxylt2 (ENSRNOG00000005621) #21 Ppp4r2 (ENSRNOG00000024647) #22 Pdzrn3 (ENSRNOG00000057556) #23 Cntn3 (ENSRNOG00000006144) #25 Chl1 (ENSRNOG00000045771) #28 ENSRNOG00000065903 AABR07061614.1 (ENSRNOG00000032820) Cntn6 (ENSRNOG00000032517) #29 Cntn4 (ENSRNOG00000005652) #30 Il5ra (ENSRNOG00000005954) #31 Trnt1 (ENSRNOG00000006432) #32 Crbn (ENSRNOG00000006534) #33 Lrrn1 (ENSRNOG00000006802) #34 Setmar (ENSRNOG00000006806) #36 Sumf1 (ENSRNOG00000006813) #37 Itpr1 (ENSRNOG00000007104) AABR07061707.1 (ENSRNOG00000052718) Mus ANCESTRAL SPECIES 12 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Shrew mouse MODERN SPECIES 11 Tmf1 (MGP_PahariEiJ_G0022427) #7 Uba3 (MGP_PahariEiJ_G0022428) #8 Arl6ip5 (MGP_PahariEiJ_G0022429) #9 Lmod3 (MGP_PahariEiJ_G0022430) #10 Frmd4b (MGP_PahariEiJ_G0022431) #11 Mitf (MGP_PahariEiJ_G0022432) #12 Mdfic2 (MGP_PahariEiJ_G0022433) #13 Foxp1 (MGP_PahariEiJ_G0022434) #14 MGP_PahariEiJ_G0022435 Eif4e3 (MGP_PahariEiJ_G0022436) #15 Gpr27 (MGP_PahariEiJ_G0022437) #16 Prok2 (MGP_PahariEiJ_G0022438) #17 Rybp (MGP_PahariEiJ_G0022439) #19 Shq1 (MGP_PahariEiJ_G0022440) #20 Gxylt2 (MGP_PahariEiJ_G0022441) #21 Ppp4r2 (MGP_PahariEiJ_G0022442) #22 Pdzrn3 (MGP_PahariEiJ_G0022443) #23 Cntn3 (MGP_PahariEiJ_G0022444) #25 Chl1 (MGP_PahariEiJ_G0022445) #28 Cntn6 (MGP_PahariEiJ_G0022446) #29 MGP_PahariEiJ_G0022447 #30 Il5ra (MGP_PahariEiJ_G0022448) #31 Trnt1 (MGP_PahariEiJ_G0022449) #32 Crbn (MGP_PahariEiJ_G0022450) #33 Lrrn1 (MGP_PahariEiJ_G0022451) #34 Setmar (MGP_PahariEiJ_G0022452) #36 Sumf1 (MGP_PahariEiJ_G0022453) #37 Itpr1 (MGP_PahariEiJ_G0022454) Bhlhe40 (MGP_PahariEiJ_G0022455) Arl8b (MGP_PahariEiJ_G0022456) Edem1 (MGP_PahariEiJ_G0022457) Mus_A ANCESTRAL SPECIES 7 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a.e #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Ryukyu mouse MODERN SPECIES 15 MGP_CAROLIEiJ_G0028676 MGP_CAROLIEiJ_G0028677 #7 MGP_CAROLIEiJ_G0028678 Arl6ip5 (MGP_CAROLIEiJ_G0028679) #9 MGP_CAROLIEiJ_G0028680 Mitf (MGP_CAROLIEiJ_G0028681) #12 Mdfic2 (MGP_CAROLIEiJ_G0028682) #13 Foxp1 (MGP_CAROLIEiJ_G0028683) #14 MGP_CAROLIEiJ_G0028684 Eif4e3 (MGP_CAROLIEiJ_G0028685) #15 Gpr27 (MGP_CAROLIEiJ_G0028686) #16 Prok2 (MGP_CAROLIEiJ_G0028687) #17 Rybp (MGP_CAROLIEiJ_G0028688) #19 Shq1 (MGP_CAROLIEiJ_G0028689) #20 Gxylt2 (MGP_CAROLIEiJ_G0028690) #21 Ppp4r2 (MGP_CAROLIEiJ_G0028691) #22 Pdzrn3 (MGP_CAROLIEiJ_G0028692) #23 Cntn3 (MGP_CAROLIEiJ_G0028693) #25 Chl1 (MGP_CAROLIEiJ_G0028694) #28 Cntn6 (MGP_CAROLIEiJ_G0028695) #29 Cntn4 (MGP_CAROLIEiJ_G0028696) #30 Il5ra (MGP_CAROLIEiJ_G0028697) #31 Trnt1 (MGP_CAROLIEiJ_G0028698) #32 Crbn (MGP_CAROLIEiJ_G0028699) #33 Lrrn1 (MGP_CAROLIEiJ_G0028700) #34 Setmar (MGP_CAROLIEiJ_G0028701) #36 Sumf1 (MGP_CAROLIEiJ_G0028702) #37 Itpr1 (MGP_CAROLIEiJ_G0028703) Bhlhe40 (MGP_CAROLIEiJ_G0028704) Arl8b (MGP_CAROLIEiJ_G0028705) Edem1 (MGP_CAROLIEiJ_G0028706) Mus_B ANCESTRAL SPECIES 15 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a.e #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Mouse MODERN SPECIES 15 Eogt (ENSMUSG00000035245) Tmf1 (ENSMUSG00000030059) #7 Uba3 (ENSMUSG00000030061) #8 Arl6ip5 (ENSMUSG00000035199) #9 Lmod3 (ENSMUSG00000044086) #10 Frmd4b (ENSMUSG00000030064) #11 Mitf (ENSMUSG00000035158) #12 Mdfic2 (ENSMUSG00000090667) #13 Foxp1 (ENSMUSG00000030067) #14 Eif4e3 (ENSMUSG00000093661) #15 Gpr27 (ENSMUSG00000072875) #16 Prok2 (ENSMUSG00000030069) #17 Rybp (ENSMUSG00000072872) #19 Shq1 (ENSMUSG00000035378) #20 Gxylt2 (ENSMUSG00000030074) #21 Ppp4r2 (ENSMUSG00000052144) #22 Pdzrn3 (ENSMUSG00000035357) #23 Cntn3 (ENSMUSG00000030075) #25 Chl1 (ENSMUSG00000030077) #28 Cntn6 (ENSMUSG00000030092) #29 Cntn4 (ENSMUSG00000064293) #30 Il5ra (ENSMUSG00000005364) #31 Trnt1 (ENSMUSG00000013736) #32 Crbn (ENSMUSG00000005362) #33 Lrrn1 (ENSMUSG00000034648) #34 Setmar (ENSMUSG00000034639) #36 Sumf1 (ENSMUSG00000030101) #37 Itpr1 (ENSMUSG00000030102) Bhlhe40 (ENSMUSG00000030103) Arl8b (ENSMUSG00000030105) Edem1 (ENSMUSG00000030104) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a.e #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 spretus MODERN SPECIES 15 Tmf1 (MGP_SPRETEiJ_G0029704) #7 Uba3 (MGP_SPRETEiJ_G0029705) #8 Arl6ip5 (MGP_SPRETEiJ_G0029706) #9 Lmod3 (MGP_SPRETEiJ_G0029707) #10 Frmd4b (MGP_SPRETEiJ_G0029708) #11 Mitf (MGP_SPRETEiJ_G0029709) #12 Mdfic2 (MGP_SPRETEiJ_G0029710) #13 Foxp1 (MGP_SPRETEiJ_G0029711) #14 MGP_SPRETEiJ_G0029712 Eif4e3 (MGP_SPRETEiJ_G0029713) #15 Gpr27 (MGP_SPRETEiJ_G0029714) #16 Prok2 (MGP_SPRETEiJ_G0029715) #17 Rybp (MGP_SPRETEiJ_G0029716) #19 Shq1 (MGP_SPRETEiJ_G0029717) #20 Gxylt2 (MGP_SPRETEiJ_G0029718) #21 Ppp4r2 (MGP_SPRETEiJ_G0029719) #22 Pdzrn3 (MGP_SPRETEiJ_G0029720) #23 Cntn3 (MGP_SPRETEiJ_G0029721) #25 Chl1 (MGP_SPRETEiJ_G0029722) #28 Cntn6 (MGP_SPRETEiJ_G0029723) #29 Cntn4 (MGP_SPRETEiJ_G0029724) #30 Il5ra (MGP_SPRETEiJ_G0029725) #31 Trnt1 (MGP_SPRETEiJ_G0029726) #32 Crbn (MGP_SPRETEiJ_G0029727) #33 Lrrn1 (MGP_SPRETEiJ_G0029728) #34 Setmar (MGP_SPRETEiJ_G0029729) #36 Sumf1 (MGP_SPRETEiJ_G0029730) #37 Itpr1 (MGP_SPRETEiJ_G0029731) Bhlhe40 (MGP_SPRETEiJ_G0029732) Arl8b (MGP_SPRETEiJ_G0029733) Edem1 (MGP_SPRETEiJ_G0029734) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 190 ENSMSIG00000020694 #22 Steppe mouse MODERN SPECIES 3356 ENSMSIG00000030528 Mitf (ENSMSIG00000030546) #12 ENSMSIG00000030568 Mdfic2 (ENSMSIG00000030573) #13 Foxp1 (ENSMSIG00000030580) #14 Eif4e3 (ENSMSIG00000030822) #15 Gpr27 (ENSMSIG00000030826) #16 Prok2 (ENSMSIG00000030827) #17 ENSMSIG00000030829 Rybp (ENSMSIG00000030836) #19 Shq1 (ENSMSIG00000030841) #20 Gxylt2 (ENSMSIG00000030850) #21 Ppp4r2 (ENSMSIG00000030852) #22 Pdzrn3 (ENSMSIG00000030855) #23 Cntn3 (ENSMSIG00000030860) #25 Lesser Egyptian jerboa MODERN SPECIES 81 ENSJJAG00000018762 ENSJJAG00000009456 ENSJJAG00000004568 ENSJJAG00000004506 Cald1 (ENSJJAG00000020901) ENSJJAG00000016972 Stra8 (ENSJJAG00000021267) Slc23a4 (ENSJJAG00000019115) Cnot4 (ENSJJAG00000016618) Nup205 (ENSJJAG00000015419) Chrm2 (ENSJJAG00000001954) Dgki (ENSJJAG00000015713) Creb3l2 (ENSJJAG00000021391) Akr1d1 (ENSJJAG00000023178) ENSJJAG00000022841 ENSJJAG00000021534 #22 Svopl (ENSJJAG00000016350) Zc3hav1 (ENSJJAG00000016894) Ttc26 (ENSJJAG00000017971) Fmc1 (ENSJJAG00000017491) Luc7l2 (ENSJJAG00000011456) Hipk2 (ENSJJAG00000019253) Tbxas1 (ENSJJAG00000020954) Parp12 (ENSJJAG00000019161) Slc37a3 (ENSJJAG00000019794) Rab19 (ENSJJAG00000015955) ENSJJAG00000010761 Dennd2a (ENSJJAG00000017109) ENSJJAG00000000905 Braf (ENSJJAG00000020559) ENSJJAG00000016723 Kangaroo rat MODERN SPECIES 331 Tafa4 (ENSDORG00000028398) Eogt (ENSDORG00000000514) Tmf1 (ENSDORG00000000515) #7 Uba3 (ENSDORG00000000516) #8 Arl6ip5 (ENSDORG00000029346) #9 Lmod3 (ENSDORG00000000518) #10 Frmd4b (ENSDORG00000002184) #11 Mitf (ENSDORG00000003336) #12 Mdfic2 (ENSDORG00000029192) #13 Foxp1 (ENSDORG00000009604) #14 Eif4e3 (ENSDORG00000006531) #15 Prok2 (ENSDORG00000006150) #17 Rybp (ENSDORG00000015021) #19 ENSDORG00000029850 #20 Gxylt2 (ENSDORG00000010918) #21 ENSDORG00000023761 #22 Pdzrn3 (ENSDORG00000002686) #23 Cntn3 (ENSDORG00000000121) #25 Chl1 (ENSDORG00000010546) #28 Cntn6 (ENSDORG00000005702) #29 Cntn4 (ENSDORG00000014028) #30 Il5ra (ENSDORG00000014033) #31 Trnt1 (ENSDORG00000014035) #32 Crbn (ENSDORG00000014038) #33 Lrrn1 (ENSDORG00000023814) #34 Setmar (ENSDORG00000026212) #36 Sumf1 (ENSDORG00000006695) #37 Itpr1 (ENSDORG00000005966) Bhlhe40 (ENSDORG00000028127) Arl8b (ENSDORG00000023904) Edem1 (ENSDORG00000002004) Rodentia_A ANCESTRAL SPECIES ENSGT00940000162859 #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000162859 #22 Naked mole-rat female MODERN SPECIES ENSHGLG00000038153 ENSHGLG00000041246 ENSHGLG00000000859 HS3ST5 (ENSHGLG00000045242) ENSHGLG00000001055 ENSHGLG00000045785 ENSHGLG00000038613 ENSHGLG00000048576 ENSHGLG00000043829 ENSHGLG00000041812 ENSHGLG00000035533 ENSHGLG00000044152 TUBE1 (ENSHGLG00000000329) ENSHGLG00000038399 ENSHGLG00000002556 ENSHGLG00000002017 #22 ENSHGLG00000034717 ENSHGLG00000000862 ENSHGLG00000032154 ENSHGLG00000033830 ENSHGLG00000001322 GTF3C6 (ENSHGLG00000039720) ENSHGLG00000000838 CDK19 (ENSHGLG00000000716) ENSHGLG00000019759 DDO (ENSHGLG00000002308) METTL24 (ENSHGLG00000001685) ENSHGLG00000001618 WASF1 (ENSHGLG00000001120) ENSHGLG00000050307 ENSHGLG00000049653 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000162859 #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000162859 #22 Degu DUPLICATION Degu MODERN SPECIES 71 ARL6IP5 (ENSODEG00000006820) #9 ENSODEG00000007217 LMOD3 (ENSODEG00000005409) #10 FRMD4B (ENSODEG00000005588) #11 ENSODEG00000006902 MITF (ENSODEG00000009287) #12 MDFIC2 (ENSODEG00000006638) #13 FOXP1 (ENSODEG00000007047) #14 EIF4E3 (ENSODEG00000006191) #15 GPR27 (ENSODEG00000006497) #16 PROK2 (ENSODEG00000007144) #17 RYBP (ENSODEG00000008699) #19 SHQ1 (ENSODEG00000009192) #20 GXYLT2 (ENSODEG00000008178) #21 ENSODEG00000019359 ENSODEG00000007497 #22 ENSODEG00000007939 ENSODEG00000006618 ENSODEG00000006984 PDZRN3 (ENSODEG00000008618) #23 CNTN3 (ENSODEG00000006512) #25 ENSODEG00000019392 CHL1 (ENSODEG00000010169) #28 ENSODEG00000019383 ENSODEG00000007284 CNTN6 (ENSODEG00000006499) #29 CNTN4 (ENSODEG00000007155) #30 IL5RA (ENSODEG00000006715) #31 TRNT1 (ENSODEG00000007597) #32 ENSODEG00000008720 #33 ENSODEG00000006737 Degu MODERN SPECIES 87 ENSODEG00000019249 SIRT1 (ENSODEG00000005951) HERC4 (ENSODEG00000008527) MYPN (ENSODEG00000008662) ATOH7 (ENSODEG00000004225) PBLD (ENSODEG00000004402) HNRNPH3 (ENSODEG00000004517) ENSODEG00000004211 DNA2 (ENSODEG00000004357) ENSODEG00000004562 ENSODEG00000004737 ENSODEG00000005072 ENSODEG00000005256 ENSODEG00000004069 MYOF (ENSODEG00000004826) ENSODEG00000006071 #22 CYP26A1 (ENSODEG00000006141) CYP26C1 (ENSODEG00000006273) EXOC6 (ENSODEG00000005032) ENSODEG00000005365 ENSODEG00000005878 ENSODEG00000005000 ENSODEG00000019122 ENSODEG00000005119 ENSODEG00000019192 ENSODEG00000005404 HHEX (ENSODEG00000006657) KIF11 (ENSODEG00000006812) IDE (ENSODEG00000005398) ENSODEG00000005936 MARCHF5 (ENSODEG00000004219) Sciuridae ANCESTRAL SPECIES ENSGT00940000162859 #22 Marmotini ANCESTRAL SPECIES ENSGT00940000162859 #22 Alpin marmot MODERN SPECIES 40 ENSMMMG00000004803 FRMD4B (ENSMMMG00000004812) #11 LMOD3 (ENSMMMG00000004950) #10 ARL6IP5 (ENSMMMG00000004969) #9 UBA3 (ENSMMMG00000004980) #8 TMF1 (ENSMMMG00000005057) #7 EOGT (ENSMMMG00000006008) MITF (ENSMMMG00000006045) #12 MDFIC2 (ENSMMMG00000006133) #13 FOXP1 (ENSMMMG00000006149) #14 ENSMMMG00000006861 #15 PROK2 (ENSMMMG00000006869) #17 RYBP (ENSMMMG00000006873) #19 SHQ1 (ENSMMMG00000006887) #20 GXYLT2 (ENSMMMG00000006933) #21 ENSMMMG00000006977 #22 PDZRN3 (ENSMMMG00000006989) #23 CNTN3 (ENSMMMG00000007027) #25 CHL1 (ENSMMMG00000007097) #28 CNTN6 (ENSMMMG00000007205) #29 CNTN4 (ENSMMMG00000007297) #30 IL5RA (ENSMMMG00000007442) #31 TRNT1 (ENSMMMG00000007463) #32 CRBN (ENSMMMG00000007485) #33 LRRN1 (ENSMMMG00000007534) #34 ENSMMMG00000007561 #36 SUMF1 (ENSMMMG00000007589) #37 ITPR1 (ENSMMMG00000007640) BHLHE40 (ENSMMMG00000007823) ARL8B (ENSMMMG00000007850) EDEM1 (ENSMMMG00000007881) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 14 ENSSVLG00005002535 CLEC12A (ENSSVLG00005002567) CLEC12B (ENSSVLG00005002618) CLEC1B (ENSSVLG00005002654) CLEC9A (ENSSVLG00005002681) CLEC1A (ENSSVLG00005002733) CLEC7A (ENSSVLG00005002852) OLR1 (ENSSVLG00005003000) TMEM52B (ENSSVLG00005003091) GABARAPL1 (ENSSVLG00005003121) ENSSVLG00005003143 KLRD1 (ENSSVLG00005003196) KLRK1 (ENSSVLG00005003286) ENSSVLG00005003311 ENSSVLG00005003354 ENSSVLG00005003379 #22 ENSSVLG00005003402 MAGOHB (ENSSVLG00005003424) STYK1 (ENSSVLG00005003455) ENSSVLG00005003489 ENSSVLG00005003540 ENSSVLG00005003552 ENSSVLG00005003566 TAS2R8 (ENSSVLG00005003583) ENSSVLG00005003595 TAS2R10 (ENSSVLG00005003619) TAS2R13 (ENSSVLG00005003632) ENSSVLG00005003663 ENSSVLG00005003678 ENSSVLG00005003690 ENSSVLG00005010818 Eurasian red squirrel MODERN SPECIES 69 ENSSVLG00005013945 ENSSVLG00005013878 #22 ENSSVLG00005013767 Lagomorpha ANCESTRAL SPECIES ENSGT00940000162859 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES ENSOCUG00000003550 ENSOCUG00000011174 ENSOCUG00000008249 ENSOCUG00000012553 ENSOCUG00000035088 SPTLC1 (ENSOCUG00000008078) ROR2 (ENSOCUG00000016548) ENSOCUG00000038426 NFIL3 (ENSOCUG00000000145) AUH (ENSOCUG00000007430) SYK (ENSOCUG00000017539) DIRAS2 (ENSOCUG00000000252) GADD45G (ENSOCUG00000013296) SEMA4D (ENSOCUG00000012955) SECISBP2 (ENSOCUG00000012932) ENSOCUG00000030530 #22 CKS2 (ENSOCUG00000033803) SHC3 (ENSOCUG00000015412) S1PR3 (ENSOCUG00000015376) ENSOCUG00000022990 SPIN1 (ENSOCUG00000011880) CDK20 (ENSOCUG00000007770) ENSOCUG00000035141 ENSOCUG00000025727 ENSOCUG00000001695 ENSOCUG00000023646 OPCML (ENSOCUG00000011172) NTM (ENSOCUG00000000213) ENSOCUG00000031738 SNX19 (ENSOCUG00000001730) ADAMTS15 (ENSOCUG00000000374) Rabbit MODERN SPECIES 5 ENSOCUG00000031137 PPM1L (ENSOCUG00000001173) ENSOCUG00000011861 ARL14 (ENSOCUG00000021985) KPNA4 (ENSOCUG00000001818) TRIM59 (ENSOCUG00000031294) SMC4 (ENSOCUG00000014835) IFT80 (ENSOCUG00000014825) ENSOCUG00000033720 ENSOCUG00000031459 IL12A (ENSOCUG00000010149) ENSOCUG00000011278 IQCJ (ENSOCUG00000022809) ENSOCUG00000023648 MFSD1 (ENSOCUG00000001272) ENSOCUG00000026179 #22 RARRES1 (ENSOCUG00000029263) LXN (ENSOCUG00000024041) GFM1 (ENSOCUG00000013561) MLF1 (ENSOCUG00000013549) RSRC1 (ENSOCUG00000030494) SHOX2 (ENSOCUG00000029123) ENSOCUG00000035608 PTX3 (ENSOCUG00000010142) VEPH1 (ENSOCUG00000010133) CCNL1 (ENSOCUG00000003451) ENSOCUG00000034465 LEKR1 (ENSOCUG00000011073) TIPARP (ENSOCUG00000014910) SSR3 (ENSOCUG00000007898) ENSOCUG00000011704 Tree shrew MODERN SPECIES 2209 GXYLT2 (ENSTBEG00000017444) #21 ENSTBEG00000017565 #22 Primates ANCESTRAL SPECIES ENSGT00940000162859 #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000162859 #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000162859 #22 Mouse lemur MODERN SPECIES 13 ENSMICG00000033782 SVOP (ENSMICG00000017624) USP30 (ENSMICG00000017625) ALKBH2 (ENSMICG00000017626) ENSMICG00000030926 #35 UNG (ENSMICG00000044482) ACACB (ENSMICG00000043665) FOXN4 (ENSMICG00000017629) MYO1H (ENSMICG00000029989) KCTD10 (ENSMICG00000017631) ENSMICG00000037399 UBE3B (ENSMICG00000017632) ENSMICG00000038066 MMAB (ENSMICG00000017633) MVK (ENSMICG00000017634) ENSMICG00000031144 #22 FAM222A (ENSMICG00000035580) TRPV4 (ENSMICG00000014505) GLTP (ENSMICG00000030371) ENSMICG00000017186 GIT2 (ENSMICG00000017192) ANKRD13A (ENSMICG00000017203) C12orf76 (ENSMICG00000047429) OASL (ENSMICG00000046728) C12orf43 (ENSMICG00000008728) ENSMICG00000031099 SPPL3 (ENSMICG00000008710) ENSMICG00000047790 ACADS (ENSMICG00000008702) UNC119B (ENSMICG00000030815) MLEC (ENSMICG00000008695) Haplorrhini ANCESTRAL SPECIES ENSGT00940000162859 #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000162859 #22 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000153510.a.f ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00490000044176 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000169558 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00440000033232.c ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Mas night monkey MODERN SPECIES 1103 ARL6IP5 (ENSANAG00000021456) #9 LMOD3 (ENSANAG00000020335) #10 FRMD4B (ENSANAG00000034952) #11 MITF (ENSANAG00000033269) #12 MDFIC2 (ENSANAG00000031584) #13 ENSANAG00000020794 ENSANAG00000017661 FOXP1 (ENSANAG00000028269) #14 EIF4E3 (ENSANAG00000031727) #15 GPR27 (ENSANAG00000015856) #16 PROK2 (ENSANAG00000025790) #17 RYBP (ENSANAG00000027832) #19 ENSANAG00000029241 #20 ENSANAG00000033608 GXYLT2 (ENSANAG00000029166) #21 ENSANAG00000024156 #22 PDZRN3 (ENSANAG00000024526) #23 Catarrhini ANCESTRAL SPECIES ENSGT00940000162859 #22 Hominoidea ANCESTRAL SPECIES ENSGT00940000162859 #22 Hominidae ANCESTRAL SPECIES ENSGT00940000162859 #22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000162859 #22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000162859 #22 Pan ANCESTRAL SPECIES ENSGT00940000162859 #22 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 485 ENSPTRG00000043861 #22 Chimpanzee MODERN SPECIES 203 ENSPTRG00000049762 #22 Gorilla MODERN SPECIES 16 LRRC15 (ENSGGOG00000007329) ATP13A3 (ENSGGOG00000011475) TMEM44 (ENSGGOG00000002921) LSG1 (ENSGGOG00000000520) FAM43A (ENSGGOG00000024196) ENSGGOG00000025992 XXYLT1 (ENSGGOG00000041811) ACAP2 (ENSGGOG00000016078) PPP1R2 (ENSGGOG00000025908) ENSGGOG00000036950 APOD (ENSGGOG00000001887) ENSGGOG00000013586 ENSGGOG00000013585 ENSGGOG00000025791 TNK2 (ENSGGOG00000008767) ENSGGOG00000039150 #22 TFRC (ENSGGOG00000007229) ZDHHC19 (ENSGGOG00000004822) SLC51A (ENSGGOG00000005877) ENSGGOG00000001988 DYNLT2B (ENSGGOG00000013275) ENSGGOG00000038913 UBXN7 (ENSGGOG00000014753) RNF168 (ENSGGOG00000014184) ENSGGOG00000042896 WDR53 (ENSGGOG00000014196) FBXO45 (ENSGGOG00000014199) NRROS (ENSGGOG00000008057) CEP19 (ENSGGOG00000025058) PIGX (ENSGGOG00000006859) PAK2 (ENSGGOG00000007239) Gibbon DUPLICATION Gibbon MODERN SPECIES 1 ENSNLEG00000030804 #22 LMLN (ENSNLEG00000015638) RPL35A (ENSNLEG00000032796) IQCG (ENSNLEG00000015597) LRCH3 (ENSNLEG00000015571) FYTTD1 (ENSNLEG00000015547) RUBCN (ENSNLEG00000015523) BDH1 (ENSNLEG00000004004) DLG1 (ENSNLEG00000001869) MELTF (ENSNLEG00000001788) ENSNLEG00000001766 NCBP2AS2 (ENSNLEG00000032636) NCBP2 (ENSNLEG00000001727) SENP5 (ENSNLEG00000001684) PAK2 (ENSNLEG00000001627) PIGX (ENSNLEG00000001618) Gibbon MODERN SPECIES 417 ENSNLEG00000032626 #22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000162859 #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000162859 #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000162859 #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000162859 #22 Olive baboon MODERN SPECIES 8 CCL1 (ENSPANG00000045394) TMEM132E (ENSPANG00000023021) CCT6B (ENSPANG00000023018) ZNF830 (ENSPANG00000023017) LIG3 (ENSPANG00000022999) RFFL (ENSPANG00000023003) RAD51D (ENSPANG00000022997) FNDC8 (ENSPANG00000022990) NLE1 (ENSPANG00000022991) UNC45B (ENSPANG00000022993) SLFN5 (ENSPANG00000022994) SLFN11 (ENSPANG00000022995) SLFN12 (ENSPANG00000022996) SLFN13 (ENSPANG00000048259) SLFN12L (ENSPANG00000030174) ENSPANG00000032536 #22 SLFN14 (ENSPANG00000022979) PEX12 (ENSPANG00000022980) AP2B1 (ENSPANG00000022982) RASL10B (ENSPANG00000046564) GAS2L2 (ENSPANG00000022978) C17orf50 (ENSPANG00000022929) MMP28 (ENSPANG00000022977) TAF15 (ENSPANG00000022930) HEATR9 (ENSPANG00000022932) ENSPANG00000030339 RDM1 (ENSPANG00000022933) LYZL6 (ENSPANG00000022934) CCL16 (ENSPANG00000022935) CCL14 (ENSPANG00000022936) CCL15 (ENSPANG00000022937) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000162859 #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000162859 #22 Common shrew MODERN SPECIES 4364 ENSSARG00000004220 #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000162859 #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000162859 #22 Carnivora ANCESTRAL SPECIES ENSGT00940000162859 #22 Caniformia ANCESTRAL SPECIES ENSGT00940000162859 #22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000162859 #22 Mustelinae ANCESTRAL SPECIES 18 ENSGT00390000010697 #7 ENSGT00550000074831.b #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00910000146944 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606.d #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 American mink MODERN SPECIES 59 FRMD4B (ENSNVIG00000001725) #11 MITF (ENSNVIG00000001792) #12 MDFIC2 (ENSNVIG00000001956) #13 FOXP1 (ENSNVIG00000001998) #14 ENSNVIG00000002970 EIF4E3 (ENSNVIG00000002988) #15 GPR27 (ENSNVIG00000003017) #16 ENSNVIG00000003023 PROK2 (ENSNVIG00000003030) #17 RYBP (ENSNVIG00000003061) #19 SHQ1 (ENSNVIG00000003089) #20 GXYLT2 (ENSNVIG00000003130) #21 ENSNVIG00000003138 #22 PDZRN3 (ENSNVIG00000003190) #23 CNTN3 (ENSNVIG00000003301) #25 ENSNVIG00000003360 CHL1 (ENSNVIG00000003410) #28 CNTN6 (ENSNVIG00000003539) #29 ENSNVIG00000003627 #30 Atlantogenata ANCESTRAL SPECIES ENSGT00940000162859 #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000162859 #22 Sloth MODERN SPECIES 5003 ENSCHOG00000007954 #22 Platypus DUPLICATION Platypus MODERN SPECIES 35 ENSOANG00000043879 ENSOANG00000038599 ENSOANG00000045913 FEM1C (ENSOANG00000037326) ENSOANG00000045434 CNBP (ENSOANG00000040160) AKAP8LY (ENSOANG00000047029) ENSOANG00000044776 ENSOANG00000037290 ENSOANG00000037198 ENSOANG00000038603 ENSOANG00000048071 ENSOANG00000046095 AMHY (ENSOANG00000049951) STK11Y (ENSOANG00000050581) PPP4R2Y (ENSOANG00000038432) #22 ENSOANG00000047700 ENSOANG00000045767 ENSOANG00000047215 ENSOANG00000042739 Platypus MODERN SPECIES 84 ENSOANG00000012272 TMEM43 (ENSOANG00000002492) UROC1 (ENSOANG00000031100) ENSOANG00000051327 ENSOANG00000029239 ENSOANG00000040843 KLF15 (ENSOANG00000014825) ENSOANG00000043021 ALDH1L1 (ENSOANG00000022069) PPM1M (ENSOANG00000004965) TWF2 (ENSOANG00000009135) ENSOANG00000012192 ENSOANG00000011702 #19 SHQ1 (ENSOANG00000013705) #20 GXYLT2 (ENSOANG00000036924) #21 ENSOANG00000036060 #22 PDZRN3 (ENSOANG00000042812) #23 ENSOANG00000048399 SEC13 (ENSOANG00000009346) ENSOANG00000003781 ENSOANG00000040437 RPL32 (ENSOANG00000037596) ENSOANG00000028240 MBD4 (ENSOANG00000004589) IFT122 (ENSOANG00000010892) PLXND1 (ENSOANG00000050054) RHO (ENSOANG00000003778) ENSOANG00000037378 ANPEP (ENSOANG00000000369) AP3S2 (ENSOANG00000041499) ARPIN (ENSOANG00000036108) Sauria ANCESTRAL SPECIES 13 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00650000094763 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E Archelosauria ANCESTRAL SPECIES ENSGT00940000162859 #22 Archosauria ANCESTRAL SPECIES ENSGT00940000162859 #22 Aves ANCESTRAL SPECIES ENSGT00940000162859 #22 Neognathae ANCESTRAL SPECIES ENSGT00940000162859 #22 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Passeriformes ANCESTRAL SPECIES 16 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Great tit MODERN SPECIES 3 TMF1 (ENSPMJG00000005253) #7 UBA3 (ENSPMJG00000005263) #8 ARL6IP5 (ENSPMJG00000005544) #9 LMOD3 (ENSPMJG00000005547) #10 FRMD4B (ENSPMJG00000005549) #11 MITF (ENSPMJG00000005557) #12 ENSPMJG00000005560 MDFIC2 (ENSPMJG00000005566) #13 FOXP1 (ENSPMJG00000005573) #14 EIF4E3 (ENSPMJG00000005596) #15 GPR27 (ENSPMJG00000005597) #16 PROK2 (ENSPMJG00000005599) #17 RYBP (ENSPMJG00000005603) #19 SHQ1 (ENSPMJG00000005611) #20 GXYLT2 (ENSPMJG00000005617) #21 ENSPMJG00000005654 #22 PDZRN3 (ENSPMJG00000005657) #23 ENSPMJG00000005665 CNTN3 (ENSPMJG00000005671) #25 CHL1 (ENSPMJG00000005688) #28 CNTN6 (ENSPMJG00000005736) #29 CNTN4 (ENSPMJG00000005757) #30 IL5RA (ENSPMJG00000005764) #31 TRNT1 (ENSPMJG00000005765) #32 CRBN (ENSPMJG00000005773) #33 ENSPMJG00000005792 #36 SUMF1 (ENSPMJG00000005794) #37 ITPR1 (ENSPMJG00000005801) BHLHE40 (ENSPMJG00000005858) ARL8B (ENSPMJG00000005862) EDEM1 (ENSPMJG00000005863) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000162859 #22 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000162859 #22 Passeroidea ANCESTRAL SPECIES 16 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000160975 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C.l #30 ENSGT00940000155198.C.k #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Zebra finch MODERN SPECIES 3 EOGT (ENSTGUG00000009683) TMF1 (ENSTGUG00000009717) #7 UBA3 (ENSTGUG00000009733) #8 ARL6IP5 (ENSTGUG00000009784) #9 LMOD3 (ENSTGUG00000009788) #10 FRMD4B (ENSTGUG00000009791) #11 MITF (ENSTGUG00000009847) #12 ENSTGUG00000009864 MDFIC2 (ENSTGUG00000022276) #13 FOXP1 (ENSTGUG00000009872) #14 EIF4E3 (ENSTGUG00000009923) #15 GPR27 (ENSTGUG00000009928) #16 PROK2 (ENSTGUG00000026872) #17 RYBP (ENSTGUG00000020831) #19 SHQ1 (ENSTGUG00000009933) #20 ENSTGUG00000009943 #22 PDZRN3 (ENSTGUG00000014523) #23 CNTN3 (ENSTGUG00000009960) #25 CHL1 (ENSTGUG00000009997) #28 CNTN6 (ENSTGUG00000010053) #29 CNTN4 (ENSTGUG00000010102) #30 IL5RA (ENSTGUG00000010171) #31 TRNT1 (ENSTGUG00000010192) #32 CRBN (ENSTGUG00000010200) #33 LRRN1 (ENSTGUG00000010215) #34 ENSTGUG00000019447 #36 SUMF1 (ENSTGUG00000010221) #37 ITPR1 (ENSTGUG00000010241) BHLHE40 (ENSTGUG00000010301) ARL8B (ENSTGUG00000022959) EDEM1 (ENSTGUG00000010316) Neognathae_c ANCESTRAL SPECIES 21 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Kakapo MODERN SPECIES 3 UBA3 (ENSSHBG00005011214) #8 ARL6IP5 (ENSSHBG00005011174) #9 LMOD3 (ENSSHBG00005011123) #10 FRMD4B (ENSSHBG00005011065) #11 ENSSHBG00005011012 ENSSHBG00005010991 ENSSHBG00005010965 MDFIC2 (ENSSHBG00005010924) #13 FOXP1 (ENSSHBG00005010885) #14 EIF4E3 (ENSSHBG00005010834) #15 GPR27 (ENSSHBG00005010828) #16 PROK2 (ENSSHBG00005010813) #17 RYBP (ENSSHBG00005010792) #19 SHQ1 (ENSSHBG00005010752) #20 GXYLT2 (ENSSHBG00005010727) #21 ENSSHBG00005010670 #22 PDZRN3 (ENSSHBG00005010639) #23 ENSSHBG00005010579 CNTN3 (ENSSHBG00005000965) #25 CHL1 (ENSSHBG00005021241) #28 CNTN6 (ENSSHBG00005021239) #29 CNTN4 (ENSSHBG00005021238) #30 IL5RA (ENSSHBG00005021237) #31 TRNT1 (ENSSHBG00005021236) #32 CRBN (ENSSHBG00005021235) #33 LRRN1 (ENSSHBG00005021234) #34 ENSSHBG00005021232 #36 SUMF1 (ENSSHBG00005021231) #37 ITPR1 (ENSSHBG00005021182) BHLHE40 (ENSSHBG00005021165) ARL8B (ENSSHBG00005021164) Galloanserae ANCESTRAL SPECIES ENSGT00940000162859 #22 Phasianidae ANCESTRAL SPECIES 16 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00940000160890 #31 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 Japanese quail MODERN SPECIES 3 ARL6IP5 (ENSCJPG00005018138) #9 LMOD3 (ENSCJPG00005018140) #10 FRMD4B (ENSCJPG00005018142) #11 MITF (ENSCJPG00005018152) #12 ENSCJPG00005018160 ENSCJPG00005018162 MDFIC2 (ENSCJPG00005018163) #13 FOXP1 (ENSCJPG00005018169) #14 EIF4E3 (ENSCJPG00005018652) #15 ENSCJPG00005018653 GPR27 (ENSCJPG00005018654) #16 PROK2 (ENSCJPG00005018655) #17 RYBP (ENSCJPG00005018659) #19 SHQ1 (ENSCJPG00005018660) #20 GXYLT2 (ENSCJPG00005018661) #21 ENSCJPG00005018662 #22 PDZRN3 (ENSCJPG00005018664) #23 CNTN3 (ENSCJPG00005018668) #25 CHL1 (ENSCJPG00005018669) #28 ENSCJPG00005018674 ENSCJPG00005018675 CNTN6 (ENSCJPG00005018676) #29 CNTN4 (ENSCJPG00005018679) #30 IL5RA (ENSCJPG00005018680) #31 TRNT1 (ENSCJPG00005018681) #32 CRBN (ENSCJPG00005018682) #33 LRRN1 (ENSCJPG00005018683) #34 ENSCJPG00005018684 #36 SUMF1 (ENSCJPG00005018685) #37 ITPR1 (ENSCJPG00005018726) ENSCJPG00005020532 Lepidosauria ANCESTRAL SPECIES 14 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Episquamata ANCESTRAL SPECIES 4 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 Laterata ANCESTRAL SPECIES 1 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00530000063647.A.a.d ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Common wall lizard MODERN SPECIES 10 TMF1 (ENSPMRG00000015455) #7 UBA3 (ENSPMRG00000015448) #8 ARL6IP5 (ENSPMRG00000015419) #9 LMOD3 (ENSPMRG00000015415) #10 FRMD4B (ENSPMRG00000015388) #11 ENSPMRG00000015381 MITF (ENSPMRG00000015352) #12 ENSPMRG00000015341 MDFIC2 (ENSPMRG00000015336) #13 FOXP1 (ENSPMRG00000015325) #14 EIF4E3 (ENSPMRG00000015314) #15 GPR27 (ENSPMRG00000015304) #16 PROK2 (ENSPMRG00000015300) #17 RYBP (ENSPMRG00000015294) #19 SHQ1 (ENSPMRG00000015291) #20 ENSPMRG00000015274 #22 PDZRN3 (ENSPMRG00000015257) #23 ENSPMRG00000015251 CNTN3 (ENSPMRG00000014964) #25 ENSPMRG00000014911 ENSPMRG00000014875 CHL1 (ENSPMRG00000014819) #28 ENSPMRG00000014808 CNTN6 (ENSPMRG00000014662) #29 CNTN4 (ENSPMRG00000014619) #30 ENSPMRG00000014615 TRNT1 (ENSPMRG00000014610) #32 CRBN (ENSPMRG00000014605) #33 LRRN1 (ENSPMRG00000014601) #34 ENSPMRG00000014598 ENSPMRG00000014589 Argentine black and white tegu MODERN SPECIES 30 UBA3 (ENSSMRG00000002519) #8 ARL6IP5 (ENSSMRG00000002565) #9 LMOD3 (ENSSMRG00000002566) #10 FRMD4B (ENSSMRG00000002580) #11 MITF (ENSSMRG00000002637) #12 MDFIC2 (ENSSMRG00000002664) #13 FOXP1 (ENSSMRG00000002823) #14 ENSSMRG00000002882 EIF4E3 (ENSSMRG00000002895) #15 GPR27 (ENSSMRG00000002896) #16 PROK2 (ENSSMRG00000002900) #17 RYBP (ENSSMRG00000002983) #19 ENSSMRG00000002992 SHQ1 (ENSSMRG00000003041) #20 GXYLT2 (ENSSMRG00000003071) #21 ENSSMRG00000003079 #22 PDZRN3 (ENSSMRG00000003119) #23 ENSSMRG00000003187 CNTN3 (ENSSMRG00000003298) #25 ENSSMRG00000010160 ENSSMRG00000010165 ENSSMRG00000010173 ENSSMRG00000010180 CHL1 (ENSSMRG00000010197) #28 CNTN6 (ENSSMRG00000013978) #29 ENSSMRG00000017841 CNTN4 (ENSSMRG00000017856) #30 ENSSMRG00000017860 TRNT1 (ENSSMRG00000017861) #32 CRBN (ENSSMRG00000017863) #33 LRRN1 (ENSSMRG00000017865) #34 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a.s #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Indian cobra MODERN SPECIES 1 UBA3 (ENSNNAG00000006386) #8 ARL6IP5 (ENSNNAG00000006448) #9 LMOD3 (ENSNNAG00000006462) #10 FRMD4B (ENSNNAG00000006495) #11 ENSNNAG00000000263 MITF (ENSNNAG00000000297) #12 MDFIC2 (ENSNNAG00000000344) #13 FOXP1 (ENSNNAG00000000627) #14 EIF4E3 (ENSNNAG00000001669) #15 GPR27 (ENSNNAG00000001680) #16 PROK2 (ENSNNAG00000001687) #17 RYBP (ENSNNAG00000001699) #19 ENSNNAG00000001713 #20 ENSNNAG00000001725 #20 GXYLT2 (ENSNNAG00000001742) #21 ENSNNAG00000001768 #22 PDZRN3 (ENSNNAG00000001782) #23 ENSNNAG00000001814 CNTN3 (ENSNNAG00000001838) #25 CHL1 (ENSNNAG00000001897) #28 CNTN6 (ENSNNAG00000002047) #29 CNTN4 (ENSNNAG00000002367) #30 TRNT1 (ENSNNAG00000002400) #32 ENSNNAG00000002424 #33 LRRN1 (ENSNNAG00000002516) #34 ENSNNAG00000002521 #36 SUMF1 (ENSNNAG00000002532) #37 ENSNNAG00000004054 BHLHE40 (ENSNNAG00000018438) ARL8B (ENSNNAG00000018443) EDEM1 (ENSNNAG00000018450) Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a.s #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Blue-lipped sea krait MODERN SPECIES 1622 ENSLLTG00000001252 #22 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000162026 #17 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a.s #23 ENSGT00940000160282 #25 ENSGT00940000160080 #28 ENSGT00940000160606 #29 ENSGT00940000155198.C #30 ENSGT00390000009678 #32 ENSGT00390000016404 #33 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Mainland tiger snake MODERN SPECIES 2 TMF1 (ENSNSUG00000007216) #7 UBA3 (ENSNSUG00000007215) #8 ENSNSUG00000007214 ARL6IP5 (ENSNSUG00000007213) #9 LMOD3 (ENSNSUG00000007212) #10 FRMD4B (ENSNSUG00000007211) #11 MITF (ENSNSUG00000007126) #12 FOXP1 (ENSNSUG00000007011) #14 EIF4E3 (ENSNSUG00000007010) #15 GPR27 (ENSNSUG00000007008) #16 PROK2 (ENSNSUG00000007007) #17 RYBP (ENSNSUG00000007004) #19 ENSNSUG00000006999 #20 ENSNSUG00000006998 #20 GXYLT2 (ENSNSUG00000006994) #21 ENSNSUG00000006992 #22 PDZRN3 (ENSNSUG00000006989) #23 ENSNSUG00000006988 CNTN3 (ENSNSUG00000006618) #25 ENSNSUG00000006605 CHL1 (ENSNSUG00000006603) #28 CNTN6 (ENSNSUG00000006539) #29 CNTN4 (ENSNSUG00000006531) #30 TRNT1 (ENSNSUG00000006530) #32 CRBN (ENSNSUG00000006528) #33 LRRN1 (ENSNSUG00000006527) #34 ENSNSUG00000006524 #36 SUMF1 (ENSNSUG00000006522) #37 ENSNSUG00000006519 ITPR1 (ENSNSUG00000006516) BHLHE40 (ENSNSUG00000006512) Eastern brown snake MODERN SPECIES 3 EOGT (ENSPTXG00000002866) TMF1 (ENSPTXG00000002867) #7 UBA3 (ENSPTXG00000002868) #8 ARL6IP5 (ENSPTXG00000002869) #9 LMOD3 (ENSPTXG00000002870) #10 FRMD4B (ENSPTXG00000002871) #11 MITF (ENSPTXG00000002872) #12 MDFIC2 (ENSPTXG00000002874) #13 FOXP1 (ENSPTXG00000002890) #14 EIF4E3 (ENSPTXG00000004035) #15 GPR27 (ENSPTXG00000004036) #16 PROK2 (ENSPTXG00000004037) #17 RYBP (ENSPTXG00000004041) #19 SHQ1 (ENSPTXG00000000044) #20 GXYLT2 (ENSPTXG00000000072) #21 ENSPTXG00000000107 #22 PDZRN3 (ENSPTXG00000000135) #23 CNTN3 (ENSPTXG00000000180) #25 CHL1 (ENSPTXG00000000274) #28 ENSPTXG00000000362 #29 CNTN4 (ENSPTXG00000000390) #30 TRNT1 (ENSPTXG00000000410) #32 CRBN (ENSPTXG00000000440) #33 LRRN1 (ENSPTXG00000000450) #34 ENSPTXG00000000457 #36 SUMF1 (ENSPTXG00000000467) #37 ITPR1 (ENSPTXG00000000808) ENSPTXG00000002883 BHLHE40 (ENSPTXG00000002885) ARL8B (ENSPTXG00000002887) EDEM1 (ENSPTXG00000002889) Anura ANCESTRAL SPECIES 52 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000159892 #14 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 Frog MODERN SPECIES 4 lmod3 (ENSXETG00000043756) #10 frmd4b (ENSXETG00000016169) #11 mitf (ENSXETG00000039276) #12 mgc147226 (ENSXETG00000000147) MDFIC2 (ENSXETG00000044995) #13 ENSXETG00000044720 ENSXETG00000043474 foxp1 (ENSXETG00000008510) #14 eif4e3 (ENSXETG00000046627) #15 gpr27 (ENSXETG00000031117) #16 prok2 (ENSXETG00000035599) rybp (ENSXETG00000015914) #19 ENSXETG00000039956 shq1 (ENSXETG00000032215) #20 gxylt2 (ENSXETG00000015929) #21 ppp4r2 (ENSXETG00000015932) #22 pdzrn3 (ENSXETG00000000401) #23 ENSXETG00000038876 ENSXETG00000000408 ccdc51 (ENSXETG00000044242) ccdc51 (ENSXETG00000047356) XB956263 [provisional:mapk12] (ENSXETG00000000409) plxnb1 (ENSXETG00000017823) ENSXETG00000041322 XB5772073 [provisional:srpk1] (ENSXETG00000024935) ENSXETG00000035213 setd5 (ENSXETG00000017841) lhfpl4 (ENSXETG00000017857) mtmr14 (ENSXETG00000017860) ENSXETG00000035279 cpne5 (ENSXETG00000017865) Leishan spiny toad MODERN SPECIES 11 GLRX2 (ENSLLEG00000028565) IVNS1ABP (ENSLLEG00000028612) ENSLLEG00000028673 ENSLLEG00000028682 ENSLLEG00000028726 SLC25A6 (ENSLLEG00000028913) MDFIC2 (ENSLLEG00000028932) #13 FOXP1 (ENSLLEG00000029038) #14 ENSLLEG00000029545 EIF4E3 (ENSLLEG00000029555) #15 ENSLLEG00000029590 RYBP (ENSLLEG00000029604) #19 ENSLLEG00000029657 SHQ1 (ENSLLEG00000029669) #20 GXYLT2 (ENSLLEG00000029705) #21 ENSLLEG00000029725 #22 PDZRN3 (ENSLLEG00000029758) #23 ENSLLEG00000029787 ENSLLEG00000029794 ENSLLEG00000029807 ENSLLEG00000029831 UBA3 (ENSLLEG00000029864) #8 TMF1 (ENSLLEG00000029962) #7 ENSLLEG00000029988 EOGT (ENSLLEG00000030010) TAFA4 (ENSLLEG00000030074) ENSLLEG00000030114 ENSLLEG00000030119 ENSLLEG00000030130 ENSLLEG00000030140 ENSLLEG00000030151 Coelacanth MODERN SPECIES 712 RYBP (ENSLACG00000015328) #19 SHQ1 (ENSLACG00000014243) #20 GXYLT2 (ENSLACG00000014093) #21 ppp4r2b (ENSLACG00000013646) #22 PDZRN3 (ENSLACG00000012887) #23 ENSLACG00000010516 CNTN3 (ENSLACG00000003784) #25 Actinopterygii ANCESTRAL SPECIES 14 ENSGT00940000164303 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00940000159882 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00390000013995.b.a #19 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000173141 Neopterygii ANCESTRAL SPECIES 59 ENSGT00550000074831 #8 ENSGT00390000008631.a #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a #11 ENSGT00940000156326 #12 ENSGT00730000111641 #13 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865 #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859 #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00390000009678 #32 ENSGT01050000244882.b.c.a ENSGT00390000016404 #33 ENSGT00940000166994 ENSGT00940000165984 ENSGT00940000157154.c ##34 ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00390000008983.a #37 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 85 ENSGT00940000159882 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831.k #8 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000160361 ENSGT00940000169850 ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00980000199174 ENSGT00390000011581 Clupeocephala ANCESTRAL SPECIES 20 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00980000199174 ENSGT00390000011581 ENSGT00940000155448.c.a Otomorpha ANCESTRAL SPECIES 112 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00840000129953 ENSGT00940000165103.b ENSGT00530000063435.b ENSGT00940000162218 ENSGT00510000048007 ENSGT00940000154343.fb ENSGT00940000155048.d.b ENSGT00390000005497 ENSGT00940000178103 Otophysi ANCESTRAL SPECIES 68 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00840000129953 ENSGT00940000165103.b ENSGT00530000063435.b ENSGT00940000162218 ENSGT00510000048007 ENSGT00940000154343.fb ENSGT00940000155048.d.b ENSGT00390000005497 ENSGT00950000183004.a.a.b Characiphysae ANCESTRAL SPECIES 104 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 Channel catfish MODERN SPECIES 2 glyctk (ENSIPUG00000000957) lrrn1 (ENSIPUG00000000963) #34 ENSIPUG00000000965 trnt1 (ENSIPUG00000000971) #32 Arl6ip5 (ENSIPUG00000000996) #9 frmd4b (ENSIPUG00000001007) #11 mitf (ENSIPUG00000001061) #12 mdfic2 (ENSIPUG00000001077) #13 foxp1 (ENSIPUG00000001094) ENSIPUG00000001179 gpr27 (ENSIPUG00000001194) #16 PROK1 (ENSIPUG00000001210) rybpb (ENSIPUG00000001221) #19 shq1 (ENSIPUG00000001247) #20 gxylt2 (ENSIPUG00000001272) #21 ppp4r2 (ENSIPUG00000001286) #22 pdzrn3 (ENSIPUG00000001304) #23 ENSIPUG00000001347 ##30 or90h4 (ENSIPUG00000001395) ENSIPUG00000001400 or90a1 (ENSIPUG00000001407) or90a1 (ENSIPUG00000001430) matn4 (ENSIPUG00000001441) RBPJL (ENSIPUG00000001498) ENSIPUG00000001509 ENSIPUG00000001523 ripor3 (ENSIPUG00000001543) blcap (ENSIPUG00000001560) TMEM74B (ENSIPUG00000001562) psmf1 (ENSIPUG00000001567) Rims4 (ENSIPUG00000001607) Characiphysae_b ANCESTRAL SPECIES 114 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 Characoidei ANCESTRAL SPECIES 347 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 Red-bellied piranha MODERN SPECIES 743 gxylt2 (ENSPNAG00000015125) #21 ppp4r2b (ENSPNAG00000003366) #22 glrbb (ENSPNAG00000015085) gria2b (ENSPNAG00000015038) Mexicana tetra MODERN SPECIES 816 gpr27 (ENSAMXG00000025552) #16 ENSAMXG00000043211 prok2 (ENSAMXG00000003435) rybpb (ENSAMXG00000034604) #19 ENSAMXG00000025407 shq1 (ENSAMXG00000043822) #20 gxylt2 (ENSAMXG00000036219) #21 ppp4r2b (ENSAMXG00000029760) #22 pdzrn3b (ENSAMXG00000037592) #23 ENSAMXG00000038375 ##30 Electric eel MODERN SPECIES 36 ENSEEEG00000004072 ENSEEEG00000004083 trnt1 (ENSEEEG00000004093) #32 arl6ip5a (ENSEEEG00000004098) #9 FRMD4B (ENSEEEG00000004100) #11 mitfa (ENSEEEG00000004103) #12 foxp1b (ENSEEEG00000004114) gpr27 (ENSEEEG00000004343) #16 prok2 (ENSEEEG00000004344) rybpb (ENSEEEG00000004345) #19 shq1 (ENSEEEG00000004346) #20 gxylt2 (ENSEEEG00000004348) #21 ppp4r2b (ENSEEEG00000004352) #22 pdzrn3b (ENSEEEG00000004359) #23 ENSEEEG00000004372 ##30 mettl9 (ENSEEEG00000004528) KDELR2 (ENSEEEG00000004529) DAGLB (ENSEEEG00000004532) SPAG9 (ENSEEEG00000004540) tob1b (ENSEEEG00000004578) WFIKKN1 (ENSEEEG00000004580) ENSEEEG00000004678 ENSEEEG00000007258 sult2st2 (ENSEEEG00000007261) ENSEEEG00000007265 bsk146 (ENSEEEG00000007271) ENSEEEG00000007272 ENSEEEG00000007276 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b.a #13 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00840000129953 ENSGT00940000165103.b ENSGT00530000063435.b ENSGT00940000162218 ENSGT00940000174411 ENSGT00940000154343.fb ENSGT00940000155048.d.b ENSGT00390000005497 ENSGT00950000183004.a.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 140 ENSGT00940000157154.d.d #34 ENSGT01050000244882.b.c.a.a.b ENSGT00390000009678.b #32 ENSGT00390000008631.a.o.a.i #9 ENSGT01020000230354.A.a.a.b #11 ENSGT00940000156326.a.b.b #12 ENSGT00390000011238 ENSGT00940000165309.d ENSGT00730000111641.b.a #13 ENSGT00940000165920.b.b ENSGT00890000139436.A.a.d #16 ENSGT00940000167138.d ENSGT00390000013995.b.a.o.b #19 ENSGT00390000007605.d #20 ENSGT00940000158065.b #21 ENSGT00940000162859.o.a #22 ENSGT00950000183062.a.a.a.k.a #23 ENSGT00940000155198.A.c ##30 ENSGT00940000165371.a.a ENSGT00940000167414.a ENSGT00940000164786.a.b ENSGT00840000129953.f ENSGT00940000165103.b.h ENSGT00530000063435.b.d ENSGT00940000162218 ENSGT00940000174411 ENSGT00940000154343.fb.a ENSGT00940000155048.d.b.a ENSGT00390000005497.`b.b ENSGT00950000183004.a.a.b.f ENSGT00390000011228.b.a.e.b Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00940000157154.d.d #34 ENSGT01050000244882.b.c.a.a.b ENSGT00390000009678.b #32 ENSGT00390000008631.a.o.a.i #9 ENSGT01020000230354.A.a.a.b #11 ENSGT00940000156326.a.b.b #12 ENSGT00390000011238 ENSGT00940000165309.d ENSGT00730000111641.b.a #13 ENSGT00940000165920.b.a ENSGT00890000139436.A.a.d #16 ENSGT00940000167138.d ENSGT00390000013995.b.a.o.b #19 ENSGT00390000007605.d #20 ENSGT00940000158065.b #21 ENSGT00940000162859.o.a #22 ENSGT00950000183062.a.a.a.k.a #23 ENSGT00940000155198.A.c ##30 ENSGT00940000165371.a.a ENSGT00940000167414.a ENSGT00940000164786.a.b ENSGT00840000129953.f ENSGT00940000165103.b.h ENSGT00530000063435.b.d ENSGT00940000162218 ENSGT00940000174411 ENSGT00940000154343.fb.a ENSGT00940000155048.d.b.a ENSGT00390000005497.`b.b ENSGT00950000183004.a.a.b.f ENSGT00390000005497.`b.a Common carp reference MODERN SPECIES 10 tcta (ENSCCRG00000075404) lrrn1 (ENSCCRG00000066281) #34 ENSCCRG00000022783 trnt1 (ENSCCRG00000078876) #32 arl6ip5a (ENSCCRG00000076953) #9 FRMD4B (ENSCCRG00000080805) #11 mitfa (ENSCCRG00000067135) #12 ENSCCRG00000059648 zgc:113054 (ENSCCRG00000062971) MDFIC2 (ENSCCRG00000053946) #13 foxp1b (ENSCCRG00000020103) prok2 (ENSCCRG00000065684) rybpb (ENSCCRG00000071274) #19 shq1 (ENSCCRG00000060346) #20 gxylt2 (ENSCCRG00000066461) #21 ppp4r2b (ENSCCRG00000002302) #22 pdzrn3b (ENSCCRG00000002306) #23 ENSCCRG00000047782 ##30 ENSCCRG00000018444 ENSCCRG00000018336 cntn4 (ENSCCRG00000066369) rbm19 (ENSCCRG00000008461) epha2a (ENSCCRG00000068142) ENSCCRG00000072777 rbp7b (ENSCCRG00000061221) tardbpb (ENSCCRG00000013752) ENSCCRG00000051131 ENSCCRG00000060611 ENSCCRG00000051140 ENSCCRG00000079479 pbrm1l (ENSCCRG00000051197) Golden-line barbel MODERN SPECIES 59 lrrn1 (ENSSGRG00000038253) #34 ENSSGRG00000038257 ENSSGRG00000038291 arl6ip5a (ENSSGRG00000038295) #9 arl6ip5a (ENSSGRG00000038297) #9 FRMD4B (ENSSGRG00000038299) #11 mitfa (ENSSGRG00000038313) #12 zgc:113054 (ENSSGRG00000038319) MDFIC2 (ENSSGRG00000038321) #13 foxp1b (ENSSGRG00000038329) gpr27 (ENSSGRG00000038466) #16 prok2 (ENSSGRG00000038468) rybpb (ENSSGRG00000038470) #19 shq1 (ENSSGRG00000038472) #20 gxylt2 (ENSSGRG00000038480) #21 ppp4r2b (ENSSGRG00000038482) #22 pdzrn3b (ENSSGRG00000038484) #23 Cyprininae ANCESTRAL SPECIES 9 ENSGT00890000139436.A.a.c #16 ENSGT00940000167138.c ENSGT00390000013995.b.a.o.a #19 ENSGT00390000007605.c #20 ENSGT00940000158065.a.b #21 ENSGT00940000162859.o.b #22 ENSGT00950000183062.a.a.a.k.b #23 ENSGT00940000155198.A.d ##30 ENSGT00940000165371.a.b ENSGT00940000167414.b ENSGT00940000164786.a.a ENSGT00840000129953.e ENSGT00940000165103.b.g ENSGT00530000063435.b.c ENSGT00940000154343.fb.b ENSGT00940000155048.d.b.b ENSGT00390000005497.`b.a ENSGT00950000183004.a.a.b.e ENSGT00940000156378.a.b.f.a ENSGT00390000003017.c.b.c ENSGT00940000157304 Cyprininae_a ANCESTRAL SPECIES 68 ENSGT00390000014365.d ENSGT00940000157154.d.c #34 ENSGT01050000244882.b.c.a.a.a ENSGT00390000009678.a #32 ENSGT00390000008631.a.o.a.j #9 ENSGT01020000230354.A.a.a.a #11 ENSGT00940000156326.a.b.a #12 ENSGT00940000165309.c ENSGT00730000111641.b.b #13 ENSGT00940000165920.b.b ENSGT00890000139436.A.a.c #16 ENSGT00940000167138.c ENSGT00390000013995.b.a.o.a #19 ENSGT00390000007605.c #20 ENSGT00940000158065.a.b #21 ENSGT00940000162859.o.b #22 ENSGT00950000183062.a.a.a.k.b #23 ENSGT00940000155198.A.d ##30 ENSGT00940000165371.a.b ENSGT00940000167414.b ENSGT00940000164786.a.a ENSGT00840000129953.e ENSGT00940000165103.b.g ENSGT00530000063435.b.c ENSGT00940000154343.fb.b ENSGT00940000155048.d.b.b ENSGT00950000183004.a.a.b.e ENSGT00390000005497.ab ENSGT00940000156378.a.b.f.a ENSGT00390000003017.c.b.c ENSGT00940000157304 Golden-line barbel MODERN SPECIES 265 ENSSGRG00000028872 trnt1 (ENSSGRG00000028871) #32 arl6ip5a (ENSSGRG00000028870) #9 FRMD4B (ENSSGRG00000028868) #11 mitfa (ENSSGRG00000028862) #12 zgc:113054 (ENSSGRG00000028860) MDFIC2 (ENSSGRG00000028859) #13 foxp1b (ENSSGRG00000028821) gpr27 (ENSSGRG00000028820) #16 prok2 (ENSSGRG00000028819) rybpb (ENSSGRG00000028818) #19 shq1 (ENSSGRG00000028817) #20 ENSSGRG00000028816 ppp4r2b (ENSSGRG00000028723) #22 pdzrn3b (ENSSGRG00000028720) #23 ENSSGRG00000028514 ##30 ENSSGRG00000028503 ENSSGRG00000028206 cntn4 (ENSSGRG00000028145) rbm19 (ENSSGRG00000027262) epha2a (ENSSGRG00000027240) Common carp reference MODERN SPECIES 16 glyctk (ENSCCRG00000072011) lrrn1 (ENSCCRG00000075719) #34 ENSCCRG00000079901 ENSCCRG00000064951 #32 arl6ip5a (ENSCCRG00000037540) #9 FRMD4B (ENSCCRG00000077808) #11 mitfa (ENSCCRG00000081533) #12 zgc:113054 (ENSCCRG00000078741) mdfic2 (ENSCCRG00000062468) #13 foxp1b (ENSCCRG00000068906) gpr27 (ENSCCRG00000072623) #16 prok2 (ENSCCRG00000050418) rybpb (ENSCCRG00000082479) #19 shq1 (ENSCCRG00000069665) #20 gxylt2 (ENSCCRG00000063702) #21 ppp4r2b (ENSCCRG00000059825) #22 pdzrn3b (ENSCCRG00000007526) #23 ENSCCRG00000057316 ENSCCRG00000025712 ##30 ENSCCRG00000052646 ENSCCRG00000036239 ENSCCRG00000064191 ENSCCRG00000005897 cntn4 (ENSCCRG00000068682) rbm19 (ENSCCRG00000007728) epha2a (ENSCCRG00000062010) ENSCCRG00000057366 tardbpb (ENSCCRG00000048153) PTPRG (ENSCCRG00000071645) ENSCCRG00000061356 cfap20dc (ENSCCRG00000017302) Goldfish MODERN SPECIES 24 ENSCARG00000019359 eif4bb (ENSCARG00000019145) vdrb (ENSCARG00000019030) ENSCARG00000019005 slc48a1b (ENSCARG00000018999) bin2b (ENSCARG00000018963) stk35l (ENSCARG00000018954) ENSCARG00000018944 ube3a (ENSCARG00000018573) ATP10A (ENSCARG00000017533) gpr27 (ENSCARG00000017466) #16 prok2 (ENSCARG00000017460) rybpb (ENSCARG00000017435) #19 shq1 (ENSCARG00000017391) #20 gxylt2 (ENSCARG00000017360) #21 ppp4r2b (ENSCARG00000017325) #22 pdzrn3b (ENSCARG00000064823) #23 ENSCARG00000064643 ##30 ENSCARG00000062000 ENSCARG00000056867 cntn4 (ENSCARG00000048270) rbm19 (ENSCARG00000047670) epha2a (ENSCARG00000047562) H6PD (ENSCARG00000047425) tardbpb (ENSCARG00000046951) PTPRG (ENSCARG00000044224) cfap20dc (ENSCARG00000044127) ENSCARG00000044090 CAMK1 (ENSCARG00000043428) pbrm1l (ENSCARG00000042350) stau1 (ENSCARG00000041776) Zebrafish MODERN SPECIES 21 ENSDARG00000076797 FRMD4B (ENSDARG00000074599) #11 trnt1 (ENSDARG00000075297) #32 arl6ip5a (ENSDARG00000077044) #9 ENSDARG00000112918 mitfa (ENSDARG00000003732) #12 ENSDARG00000087873 zgc:113054 (ENSDARG00000053483) mdfic2 (ENSDARG00000091832) #13 foxp1b (ENSDARG00000014181) gpr27 (ENSDARG00000006607) #16 prok2 (ENSDARG00000091616) rybpb (ENSDARG00000053459) #19 shq1 (ENSDARG00000058522) #20 gxylt2 (ENSDARG00000044191) #21 ppp4r2b (ENSDARG00000053447) #22 pdzrn3b (ENSDARG00000073869) #23 ENSDARG00000053454 ##30 ENSDARG00000103109 ENSDARG00000104277 ##30 ENSDARG00000112767 cntn4 (ENSDARG00000098161) rbm19 (ENSDARG00000042590) epha2a (ENSDARG00000017354) H6PD (ENSDARG00000060153) rbp7b (ENSDARG00000070486) cenps (ENSDARG00000070485) tardbpb (ENSDARG00000040031) PTPRG (ENSDARG00000060123) cfap20dc (ENSDARG00000026086) ENSDARG00000096954 Clupeiformes ANCESTRAL SPECIES 27 ENSGT00940000155071.C ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000164786.a ENSGT00840000129953 ENSGT00940000165103.b ENSGT00940000165984 ENSGT00390000008983.a #37 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 310 ENSDCDG00000030731 ##19 shq1 (ENSDCDG00000030729) #20 gxylt2 (ENSDCDG00000030727) #21 ppp4r2b (ENSDCDG00000030726) #22 pdzrn3b (ENSDCDG00000030722) #23 Denticle herring MODERN SPECIES 3 ENSDCDG00000003598 setmar (ENSDCDG00000002977) #36 lrrn1 (ENSDCDG00000002962) #34 ENSDCDG00000034996 trnt1 (ENSDCDG00000034993) #32 arl6ip5a (ENSDCDG00000034990) #9 FRMD4B (ENSDCDG00000034978) #11 mitfa (ENSDCDG00000034964) #12 zgc:113054 (ENSDCDG00000034956) foxp1b (ENSDCDG00000034762) gpr27 (ENSDCDG00000034737) #16 prok2 (ENSDCDG00000034735) rybpb (ENSDCDG00000034734) #19 shq1 (ENSDCDG00000034732) #20 gxylt2 (ENSDCDG00000034731) #21 ppp4r2b (ENSDCDG00000034728) #22 pdzrn3b (ENSDCDG00000034720) #23 ENSDCDG00000034577 ##30 ENSDCDG00000034312 ENSDCDG00000034027 ##30 cntn4 (ENSDCDG00000032350) rbm19 (ENSDCDG00000032266) epha2a (ENSDCDG00000032258) FUT9 (ENSDCDG00000032252) ENSDCDG00000032248 ENSDCDG00000032245 sumf1 (ENSDCDG00000032222) #37 ENSDCDG00000032216 ENSDCDG00000032215 FUT9 (ENSDCDG00000032214) stab1 (ENSDCDG00000031873) Atlantic herring MODERN SPECIES 21 ITPR1 (ENSCHAG00000018029) setmar (ENSCHAG00000025278) #36 lrrn1 (ENSCHAG00000025281) #34 ENSCHAG00000025284 trnt1 (ENSCHAG00000025289) #32 arl6ip5a (ENSCHAG00000025298) #9 FRMD4B (ENSCHAG00000025306) #11 mitfa (ENSCHAG00000025374) #12 zgc:113054 (ENSCHAG00000025384) foxp1b (ENSCHAG00000025407) gpr27 (ENSCHAG00000025654) #16 prok2 (ENSCHAG00000025655) RYBP (ENSCHAG00000025660) #19 shq1 (ENSCHAG00000025662) #20 gxylt2 (ENSCHAG00000025668) #21 ppp4r2b (ENSCHAG00000025680) #22 pdzrn3b (ENSCHAG00000025689) #23 ENSCHAG00000025710 ENSCHAG00000025815 ##30 ENSCHAG00000026930 ENSCHAG00000027584 ##30 cntn4 (ENSCHAG00000027695) rbm19 (ENSCHAG00000027761) epha2a (ENSCHAG00000027782) ENSCHAG00000027792 ENSCHAG00000027795 ENSCHAG00000027799 sumf1 (ENSCHAG00000027805) #37 ENSCHAG00000027829 pfkfb4b (ENSCHAG00000027850) ENSCHAG00000027863 Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00940000155448.c.b Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000004409.b ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000164786.a ENSGT00940000158442 ENSGT00940000160361 ENSGT00940000169850 ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b.h.b ENSGT00940000155448.c.a ENSGT00940000159288 ENSGT00950000182937.B.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 8 ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d #36 ENSGT00940000157154.d.e #34 ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #9 ENSGT01020000230354.A.a.a.c #11 ENSGT00940000156326.a.b.d #12 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #16 ENSGT00940000167138.b ENSGT00390000007605 #20 ENSGT00940000158065.e #21 ENSGT00940000162859.o.e #22 ENSGT00950000183062.a.a.a.a #23 ENSGT00940000155198.A.e ##30 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##30 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT01100000263545.a.b.c.a.q ENSGT00940000165667.a ENSGT00950000183154.b.b ENSGT00390000002635.c ENSGT00940000156091.b.h ENSGT00390000011581 ENSGT00940000153776.a.b.h.b ENSGT00940000155448.c.a ENSGT00940000159288.h Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000155071.C.f ENSGT00940000162663.d #36 ENSGT00940000157154.d.e #34 ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #9 ENSGT01020000230354.A.a.a.c #11 ENSGT00940000156326.a.b.d #12 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #16 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #19 ENSGT00390000007605 #20 ENSGT00940000158065.e #21 ENSGT00940000162859.o.e #22 ENSGT00950000183062.a.a.a.a #23 ENSGT00940000155198.A.e ##30 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##30 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT01100000263545.a.b.c.a.q ENSGT00940000165667.a ENSGT00950000183154.b.b ENSGT00390000002635.c ENSGT00940000156091.b.h ENSGT00390000011581 ENSGT00940000153776.a.b.h.b ENSGT00940000155448.c.a ENSGT00940000159288.h Salmo ANCESTRAL SPECIES 6 ENSGT00940000162663.d #36 ENSGT00940000157154.d.e #34 ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000009678.f #32 ENSGT00390000008631.a.o.a.a #9 ENSGT01020000230354.A.a.a.c #11 ENSGT00940000156326.a.b.d #12 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #16 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #19 ENSGT00390000007605 #20 ENSGT00940000158065.e #21 ENSGT00940000162859.o.e #22 ENSGT00950000183062.a.a.a.a #23 ENSGT00940000155198.A.e ##30 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##30 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b ENSGT00940000163346.a.i.b.b.a ENSGT01100000263545.a.b.c.a.q ENSGT00940000160361 ENSGT00950000183154.b.b ENSGT00390000002635.c ENSGT00940000156091.b.h ENSGT00390000011581 ENSGT00940000153776.a.b.h.b River trout MODERN SPECIES 7 setmar (ENSSTUG00000034728) #36 ENSSTUG00000034740 lrrn1 (ENSSTUG00000034747) #34 ENSSTUG00000034758 ENSSTUG00000034824 arl6ip5a (ENSSTUG00000034827) #9 FRMD4B (ENSSTUG00000034835) #11 mitfa (ENSSTUG00000034903) #12 zgc:113054 (ENSSTUG00000034952) foxp1b (ENSSTUG00000034974) gpr27 (ENSSTUG00000035129) #16 prok2 (ENSSTUG00000035134) RYBP (ENSSTUG00000035141) #19 shq1 (ENSSTUG00000035153) #20 gxylt2 (ENSSTUG00000035198) #21 ppp4r2b (ENSSTUG00000035210) #22 pdzrn3b (ENSSTUG00000035228) #23 ENSSTUG00000035268 ##30 ENSSTUG00000035461 ENSSTUG00000036007 ##30 cntn4 (ENSSTUG00000038446) ENSSTUG00000043834 ENSSTUG00000044631 ENSSTUG00000044636 ENSSTUG00000044647 ENSSTUG00000044687 ENSSTUG00000044692 ENSSTUG00000044708 CDK5RAP1 (ENSSTUG00000044820) ghrh (ENSSTUG00000045087) rpn2 (ENSSTUG00000045179) Atlantic salmon MODERN SPECIES 14 ENSSSAG00000078424 ENSSSAG00000087334 trnt1 (ENSSSAG00000078413) #32 arl6ip5a (ENSSSAG00000098089) #9 FRMD4B (ENSSSAG00000078356) #11 mitfa (ENSSSAG00000078323) #12 zgc:113054 (ENSSSAG00000078317) ENSSSAG00000121941 foxp1b (ENSSSAG00000077820) gpr27 (ENSSSAG00000093272) #16 prok2 (ENSSSAG00000077791) RYBP (ENSSSAG00000105530) #19 ENSSSAG00000103273 #19 shq1 (ENSSSAG00000077767) #20 gxylt2 (ENSSSAG00000077755) #21 ppp4r2b (ENSSSAG00000115308) #22 pdzrn3b (ENSSSAG00000077728) #23 ENSSSAG00000074668 ##30 ENSSSAG00000069369 ENSSSAG00000068685 ##30 cntn4 (ENSSSAG00000057173) ENSSSAG00000051104 ENSSSAG00000077358 hes5 (ENSSSAG00000077365) ENSSSAG00000111168 ENSSSAG00000071328 ENSSSAG00000072680 bpifb2 (ENSSSAG00000077275) cdk5rap1 (ENSSSAG00000077209) ENSSSAG00000076745 mybl2b (ENSSSAG00000076703) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000155071.C.f ENSGT00940000162663.d #36 ENSGT00940000157154.d.e #34 ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #9 ENSGT01020000230354.A.a.a.c #11 ENSGT00940000156326.a.b.d #12 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #16 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #19 ENSGT00390000007605 #20 ENSGT00940000158065.e #21 ENSGT00940000162859.o.e #22 ENSGT00950000183062.a.a.a.a #23 ENSGT00940000155198.A.e ##30 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##30 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b.f.b ENSGT00940000163346.a.i.b.b.b.f.a ENSGT01100000263545.a.b.c.a.q ENSGT00940000165667.a ENSGT00950000183154.b.b ENSGT00390000002635.c ENSGT00940000156091.b.h ENSGT00390000011581 ENSGT00940000153776.a.b.h.b Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000155071.C.f ENSGT00940000162663.d #36 ENSGT00940000157154.d.e #34 ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #9 ENSGT01020000230354.A.a.a.c #11 ENSGT00940000156326.a.b.d #12 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #16 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #19 ENSGT00390000007605 #20 ENSGT00940000158065.e #21 ENSGT00940000162859.o.e #22 ENSGT00950000183062.a.a.a.a #23 ENSGT00940000155198.A.e ##30 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##30 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b.f.a ENSGT00940000163346.a.i.b.b.b.f.b ENSGT01100000263545.a.b.c.a.q ENSGT00940000165667.a ENSGT00950000183154.b.b ENSGT00390000002635.c ENSGT00940000156091.b.h ENSGT00390000011581 ENSGT00940000153776.a.b.h.b Chinook salmon MODERN SPECIES 31 setmar (ENSOTSG00005029489) #36 lrrn1 (ENSOTSG00005029488) #34 ENSOTSG00005029487 ENSOTSG00005029486 arl6ip5a (ENSOTSG00005029485) #9 FRMD4B (ENSOTSG00005029474) #11 mitfa (ENSOTSG00005029470) #12 zgc:113054 (ENSOTSG00005029466) foxp1b (ENSOTSG00005029453) gpr27 (ENSOTSG00005029449) #16 prok2 (ENSOTSG00005029448) RYBP (ENSOTSG00005029447) #19 ENSOTSG00005029445 #19 shq1 (ENSOTSG00005029435) #20 gxylt2 (ENSOTSG00005029433) #21 ppp4r2b (ENSOTSG00005029431) #22 pdzrn3b (ENSOTSG00005029430) #23 ENSOTSG00005029428 ##30 ENSOTSG00005029427 ##30 ENSOTSG00005027529 ENSOTSG00005027201 ##30 cntn4 (ENSOTSG00005012641) EPB41L1 (ENSOTSG00005012433) ENSOTSG00005012427 ENSOTSG00005012426 ENSOTSG00005012423 cdk5rap1 (ENSOTSG00005012188) ghrh (ENSOTSG00005012186) rpn2 (ENSOTSG00005011149) mybl2b (ENSOTSG00005011136) ift52 (ENSOTSG00005011124) Coho salmon MODERN SPECIES 25 bhlhe40 (ENSOKIG00005000439) ITPR1 (ENSOKIG00005000297) lrrn1 (ENSOKIG00005000048) #34 ENSOKIG00005000039 ENSOKIG00005000022 arl6ip5a (ENSOKIG00005000004) #9 FRMD4B (ENSOKIG00005049789) #11 mitfa (ENSOKIG00005049743) #12 foxp1b (ENSOKIG00005049705) ENSOKIG00005049689 gpr27 (ENSOKIG00005049684) #16 prok2 (ENSOKIG00005049681) RYBP (ENSOKIG00005049678) #19 shq1 (ENSOKIG00005049664) #20 gxylt2 (ENSOKIG00005049658) #21 ppp4r2b (ENSOKIG00005049651) #22 pdzrn3b (ENSOKIG00005049640) #23 ENSOKIG00005049593 ##30 ENSOKIG00005048581 ENSOKIG00005047528 ##30 ENSOKIG00005047391 cntn4 (ENSOKIG00005044284) EPB41L1 (ENSOKIG00005043871) ENSOKIG00005043822 ENSOKIG00005043808 ENSOKIG00005043800 ENSOKIG00005043794 ENSOKIG00005043778 ENSOKIG00005043724 CDK5RAP1 (ENSOKIG00005043139) ghrh (ENSOKIG00005043074) Rainbow trout MODERN SPECIES 28 setmar (ENSOMYG00000018797) #36 lrrn1 (ENSOMYG00000018787) #34 ENSOMYG00000018779 praf3 (ENSOMYG00000018762) #9 FRMD4B (ENSOMYG00000018705) #11 mitfa (ENSOMYG00000018633) #12 ENSOMYG00000018605 foxp1b (ENSOMYG00000018060) gpr27 (ENSOMYG00000018032) #16 prok2 (ENSOMYG00000018025) ENSOMYG00000063847 RYBP (ENSOMYG00000018018) #19 ENSOMYG00000077625 shq1 (ENSOMYG00000017934) #20 gxylt2 (ENSOMYG00000017886) #21 ppp4r2b (ENSOMYG00000017842) #22 pdzrn3b (ENSOMYG00000017773) #23 ENSOMYG00000017727 ##30 ENSOMYG00000011770 ENSOMYG00000007157 ##30 cntn4 (ENSOMYG00000002873) ENSOMYG00000001699 ENSOMYG00000001360 ENSOMYG00000021216 ENSOMYG00000027841 lbp/bpi-1 (ENSOMYG00000021186) ENSOMYG00000020824 ENSOMYG00000020749 ENSOMYG00000019375 mybl2b (ENSOMYG00000059546) IFT52 (ENSOMYG00000018950) Huchen MODERN SPECIES 280 ENSHHUG00000031123 gpr27 (ENSHHUG00000031127) #16 prok2 (ENSHHUG00000031137) RYBP (ENSHHUG00000031196) #19 shq1 (ENSHHUG00000031198) #20 gxylt2 (ENSHHUG00000031203) #21 ppp4r2b (ENSHHUG00000031212) #22 pdzrn3b (ENSHHUG00000031233) #23 ENSHHUG00000031255 ##30 ENSHHUG00000031684 ENSHHUG00000032379 ##30 cntn4 (ENSHHUG00000032456) EPB41L1 (ENSHHUG00000033246) Salmoninae ANCESTRAL SPECIES 103 ENSGT00940000157154.d.f #34 ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a.b #9 ENSGT01020000230354.A.a.a.d #11 ENSGT00940000156326.a.b.c #12 ENSGT00940000165309.e.a ENSGT00730000111641.b #13 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a.b #16 ENSGT00940000167138.a ENSGT00390000013995.b.a #19 ENSGT00940000177762 ENSGT00940000158065.f #21 ENSGT00940000162859.o.f #22 ENSGT00950000183062.a.a.a.b #23 ENSGT00940000155198.A.f.a.a ##30 Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000157154.d.f #34 ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a.b #9 ENSGT01020000230354.A.a.a.d #11 ENSGT00940000156326.a.b.c #12 ENSGT00940000165309.e.a ENSGT00730000111641.b #13 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a.b #16 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #19 ENSGT00940000177762 ENSGT00940000158065.f #21 ENSGT00940000162859.o.f #22 ENSGT00950000183062.a.a.a.b #23 ENSGT00940000155198.A.f.a.a ##30 ENSGT00940000155198.A.f.b ##30 ENSGT00940000155198.A.f.a.b ##30 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##30 ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i Salmo ANCESTRAL SPECIES 33 ENSGT00940000157154.d.f #34 ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.e #32 ENSGT00390000008631.a.o.a.b #9 ENSGT01020000230354.A.a.a.d #11 ENSGT00940000156326.a.b.c #12 ENSGT00940000165309.e.a ENSGT00730000111641.b #13 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a.b #16 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #19 ENSGT00940000177762 ENSGT00940000158065.f #21 ENSGT00940000162859.o.f #22 ENSGT00950000183062.a.a.a.b #23 ENSGT00940000155198.A.f.b ##30 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##30 ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01060000248883.a.a.a.a ENSGT00940000163346.a.j ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00990000212810 ENSGT00940000159288.g River trout MODERN SPECIES 5 lrrn1 (ENSSTUG00000015297) #34 ENSSTUG00000015291 trnt1 (ENSSTUG00000015279) #32 arl6ip5a (ENSSTUG00000015266) #9 FRMD4B (ENSSTUG00000015084) #11 mitfa (ENSSTUG00000014914) #12 zgc:113054 (ENSSTUG00000014888) mdfic2 (ENSSTUG00000014882) #13 foxp1b (ENSSTUG00000014503) EIF4E3 (ENSSTUG00000014483) #15 gpr27 (ENSSTUG00000014479) #16 prok2 (ENSSTUG00000014470) RYBP (ENSSTUG00000014455) #19 ENSSTUG00000014447 gxylt2 (ENSSTUG00000014423) #21 ppp4r2b (ENSSTUG00000014392) #22 pdzrn3b (ENSSTUG00000014367) #23 ENSSTUG00000014263 ##30 ENSSTUG00000010027 ENSSTUG00000007621 ##30 cntn4 (ENSSTUG00000003421) ENSSTUG00000001843 ENSSTUG00000001732 ENSSTUG00000001724 ENSSTUG00000001658 ENSSTUG00000001639 rpn2 (ENSSTUG00000001495) mybl2b (ENSSTUG00000001451) nme4 (ENSSTUG00000001423) ENSSTUG00000001417 RASSF5 (ENSSTUG00000001403) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000077580 TRNT1 (ENSSSAG00000077584) #32 arl6ip5a (ENSSSAG00000077595) #9 FRMD4B (ENSSSAG00000077601) #11 mitfa (ENSSSAG00000077659) #12 zgc:113054 (ENSSSAG00000077695) mdfic2 (ENSSSAG00000077706) #13 foxp1b (ENSSSAG00000077724) ENSSSAG00000111237 EIF4E3 (ENSSSAG00000118265) #15 gpr27 (ENSSSAG00000090342) #16 prok2 (ENSSSAG00000077970) RYBP (ENSSSAG00000112642) #19 ENSSSAG00000077990 gxylt2 (ENSSSAG00000082451) #21 ppp4r2b (ENSSSAG00000086913) #22 ENSSSAG00000098079 pdzrn3b (ENSSSAG00000103526) #23 ENSSSAG00000078049 ENSSSAG00000078091 ##30 ENSSSAG00000078592 ENSSSAG00000079074 ##30 ENSSSAG00000090029 cntn4 (ENSSSAG00000080512) ENSSSAG00000080978 ENSSSAG00000111876 ENSSSAG00000083264 ENSSSAG00000110673 ENSSSAG00000093094 ENSSSAG00000080989 ENSSSAG00000086990 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000157154.d.f #34 ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h #32 ENSGT00390000008631.a.o.a.b #9 ENSGT01020000230354.A.a.a.d #11 ENSGT00940000156326.a.b.c #12 ENSGT00940000165309.e.a ENSGT00730000111641.b #13 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a.b #16 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #19 ENSGT00940000177762 ENSGT00940000158065.f #21 ENSGT00940000162859.o.f #22 ENSGT00950000183062.a.a.a.b #23 ENSGT00940000155198.A.f.a.a ##30 ENSGT00940000155198.A.f.a.b ##30 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##30 ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000162663.c #36 ENSGT00940000157154.d.f #34 ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h #32 ENSGT00390000008631.a.o.a.b #9 ENSGT01020000230354.A.a.a.d #11 ENSGT00940000156326.a.b.c #12 ENSGT00940000165309.e.a ENSGT00730000111641.b #13 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a.b #16 ENSGT00390000013995.b.a.ab #19 ENSGT00940000177762 ENSGT00940000158065.f #21 ENSGT00940000162859.o.f #22 ENSGT00950000183062.a.a.a.b #23 ENSGT00940000155198.A.f.a.a ##30 ENSGT00940000155198.A.f.a.b ##30 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##30 ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01060000248883.b ENSGT00940000163346.a.i.b.b.a ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g Coho salmon MODERN SPECIES lrrn1 (ENSOKIG00005012515) #34 ENSOKIG00005012512 trnt1 (ENSOKIG00005012500) #32 arl6ip5a (ENSOKIG00005012491) #9 FRMD4B (ENSOKIG00005012358) #11 mitfa (ENSOKIG00005012208) #12 zgc:113054 (ENSOKIG00005012160) mdfic2 (ENSOKIG00005012150) #13 foxp1b (ENSOKIG00005011174) EIF4E3 (ENSOKIG00005011081) #15 gpr27 (ENSOKIG00005011072) #16 ENSOKIG00005011059 RYBP (ENSOKIG00005011042) #19 ENSOKIG00005011034 gxylt2 (ENSOKIG00005011018) #21 ppp4r2b (ENSOKIG00005010978) #22 pdzrn3b (ENSOKIG00005010911) #23 ENSOKIG00005010875 ##30 ENSOKIG00005006688 ENSOKIG00005003652 ##30 cntn4 (ENSOKIG00005001800) ENSOKIG00005001615 ENSOKIG00005001586 ENSOKIG00005001578 ENSOKIG00005001565 ENSOKIG00005001557 rpn2 (ENSOKIG00005001481) MYBL2 (ENSOKIG00005001420) nme4 (ENSOKIG00005001407) RASSF5 (ENSOKIG00005001398) ikbke (ENSOKIG00005001380) Chinook salmon MODERN SPECIES 11 bhlhe40 (ENSOTSG00005001151) ITPR1 (ENSOTSG00005001228) setmar (ENSOTSG00005001878) #36 lrrn1 (ENSOTSG00005001879) #34 ENSOTSG00005001880 trnt1 (ENSOTSG00005001883) #32 arl6ip5a (ENSOTSG00005001888) #9 FRMD4B (ENSOTSG00005001893) #11 mitfa (ENSOTSG00005001922) #12 zgc:113054 (ENSOTSG00005002048) foxp1b (ENSOTSG00005002056) EIF4E3 (ENSOTSG00005004227) #15 gpr27 (ENSOTSG00005004228) #16 RYBP (ENSOTSG00005004229) #19 gxylt2 (ENSOTSG00005004230) #21 ppp4r2b (ENSOTSG00005004231) #22 pdzrn3b (ENSOTSG00005004234) #23 ENSOTSG00005004235 ##30 ENSOTSG00005004237 ##30 ENSOTSG00005004272 CNTN4 (ENSOTSG00005010550) ##30 ENSOTSG00005016602 cntn4 (ENSOTSG00005016608) ENSOTSG00005022408 ENSOTSG00005022428 ENSOTSG00005022429 ENSOTSG00005022431 ENSOTSG00005022540 rpn2 (ENSOTSG00005022542) mybl2b (ENSOTSG00005025075) zgc:101564 (ENSOTSG00005025080) Rainbow trout MODERN SPECIES 8 arl6ip5a (ENSOMYG00000024815) #9 FRMD4B (ENSOMYG00000025031) #11 ENSOMYG00000049451 mitfa (ENSOMYG00000025566) #12 zgc:113054 (ENSOMYG00000025999) mdfic2 (ENSOMYG00000026023) #13 foxp1b (ENSOMYG00000026154) ENSOMYG00000068868 ENSOMYG00000026823 EIF4E3 (ENSOMYG00000026861) #15 gpr27 (ENSOMYG00000026893) #16 prok2 (ENSOMYG00000026926) RYBP (ENSOMYG00000058096) #19 ENSOMYG00000027011 gxylt2 (ENSOMYG00000027027) #21 ppp4r2b (ENSOMYG00000027058) #22 pdzrn3b (ENSOMYG00000027116) #23 ENSOMYG00000066808 ENSOMYG00000027186 ##30 ENSOMYG00000027763 ENSOMYG00000030724 ##30 cntn4 (ENSOMYG00000038930) ENSOMYG00000042824 ENSOMYG00000057673 ENSOMYG00000042830 ENSOMYG00000042833 ENSOMYG00000042836 lbp/bpi-2 (ENSOMYG00000042849) tcbp2 (ENSOMYG00000074078) ENSOMYG00000042897 ENSOMYG00000042992 Huchen MODERN SPECIES 816 foxp1b (ENSHHUG00000050602) EIF4E3 (ENSHHUG00000050590) #15 gpr27 (ENSHHUG00000050587) #16 prok2 (ENSHHUG00000050580) ENSHHUG00000050577 #19 ENSHHUG00000050576 ENSHHUG00000050566 gxylt2 (ENSHHUG00000050564) #21 ENSHHUG00000050559 #22 Northern pike MODERN SPECIES 16 setmar (ENSELUG00000003826) #36 lrrn1 (ENSELUG00000003813) #34 ENSELUG00000028972 trnt1 (ENSELUG00000003802) #32 praf3 (ENSELUG00000003790) #9 FRMD4B (ENSELUG00000003740) #11 mitfa (ENSELUG00000003651) #12 zgc:113054 (ENSELUG00000003610) mdfic2 (ENSELUG00000003599) #13 foxp1b (ENSELUG00000003572) EIF4E3 (ENSELUG00000003543) #15 prok2 (ENSELUG00000003525) rybpa (ENSELUG00000003503) #19 shq1 (ENSELUG00000003476) #20 gxylt2 (ENSELUG00000003451) #21 ppp4r2b (ENSELUG00000003437) #22 pdzrn3b (ENSELUG00000003425) #23 ENSELUG00000032197 ENSELUG00000003407 ENSELUG00000025303 ENSELUG00000003398 ##30 ENSELUG00000003353 CNTN4 (ENSELUG00000003279) ##30 cntn4 (ENSELUG00000003143) EPB41L1 (ENSELUG00000003026) ENSELUG00000002906 ENSELUG00000002887 ENSELUG00000024557 CDK5RAP1 (ENSELUG00000024526) ENSELUG00000001539 rpn2 (ENSELUG00000024314) Acanthomorphata ANCESTRAL SPECIES 42 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Pinecone sodierfish MODERN SPECIES 19 setmar (ENSMMDG00005009073) #36 lrrn1 (ENSMMDG00005009074) #34 ENSMMDG00005009079 trnt1 (ENSMMDG00005009082) #32 arl6ip5a (ENSMMDG00005009086) #9 FRMD4B (ENSMMDG00005009095) #11 mitfa (ENSMMDG00005009103) #12 zgc:113054 (ENSMMDG00005009107) foxp1b (ENSMMDG00005009108) EIF4E3 (ENSMMDG00005009182) #15 gpr27 (ENSMMDG00005009185) #16 prok2 (ENSMMDG00005009188) rybpa (ENSMMDG00005009204) #19 shq1 (ENSMMDG00005009217) #20 gxylt2 (ENSMMDG00005009227) #21 ppp4r2b (ENSMMDG00005009228) #22 pdzrn3b (ENSMMDG00005009235) #23 ENSMMDG00005009427 ##30 ENSMMDG00005010692 ENSMMDG00005011751 cntn4 (ENSMMDG00005011797) EPB41L1 (ENSMMDG00005011814) ENSMMDG00005013086 cdk5rap1 (ENSMMDG00005013347) ghrh (ENSMMDG00005013568) rpn2 (ENSMMDG00005013613) mybl2b (ENSMMDG00005017376) ift52 (ENSMMDG00005017450) ENSMMDG00005017451 acot8 (ENSMMDG00005017452) phactr3b (ENSMMDG00005017453) Percomorphaceae ANCESTRAL SPECIES 1 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Tiger tail seahorse MODERN SPECIES 280 ITPR1 (ENSHCOG00000010574) ENSHCOG00000010596 setmar (ENSHCOG00000010603) #36 lrrn1 (ENSHCOG00000010606) #34 trnt1 (ENSHCOG00000010618) #32 arl6ip5a (ENSHCOG00000010626) #9 FRMD4B (ENSHCOG00000010682) #11 mitfa (ENSHCOG00000010705) #12 foxp1b (ENSHCOG00000010731) ENSHCOG00000010745 EIF4E3 (ENSHCOG00000010757) #15 prok2 (ENSHCOG00000010773) RYBP (ENSHCOG00000010777) #19 shq1 (ENSHCOG00000010799) #20 gxylt2 (ENSHCOG00000010804) #21 ppp4r2b (ENSHCOG00000010808) #22 pdzrn3b (ENSHCOG00000010837) #23 ENSHCOG00000011365 ##30 ENSHCOG00000012171 cntn4 (ENSHCOG00000012418) EPB41L1 (ENSHCOG00000012467) ENSHCOG00000012484 ENSHCOG00000012516 ENSHCOG00000012529 cdk5rap1 (ENSHCOG00000012575) ENSHCOG00000012590 rpn2 (ENSHCOG00000012635) mybl2b (ENSHCOG00000012656) ift52 (ENSHCOG00000012698) acot8 (ENSHCOG00000012712) phactr3b (ENSHCOG00000012772) Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Ovalentaria ANCESTRAL SPECIES 2 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a Aplocheiloidei ANCESTRAL SPECIES 94 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A.g ##30 ENSGT00940000165371.a ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Mangrove rivulus MODERN SPECIES 97 EIF4E3 (ENSKMAG00000004316) #15 gpr27 (ENSKMAG00000004375) #16 prok2 (ENSKMAG00000004402) rybpa (ENSKMAG00000004423) #19 ENSKMAG00000004437 shq1 (ENSKMAG00000004457) #20 gxylt2 (ENSKMAG00000004483) #21 ppp4r2b (ENSKMAG00000004516) #22 pdzrn3b (ENSKMAG00000004548) #23 CNTN4 (ENSKMAG00000004605) ##30 ENSKMAG00000004717 ENSKMAG00000004851 ENSKMAG00000004874 ENSKMAG00000004905 cntn4 (ENSKMAG00000004922) ENSKMAG00000005009 ENSKMAG00000005091 Turquoise killifish MODERN SPECIES 1619 TRNT1 (ENSNFUG00015007219) #32 ARL6IP5A (ENSNFUG00015007225) #9 FRMD4B (ENSNFUG00015007246) #11 ENSNFUG00015007330 mitfa (ENSNFUG00015007344) #12 zgc:113054 (ENSNFUG00015007370) foxp1b (ENSNFUG00015007381) ENSNFUG00015007395 EIF4E3 (ENSNFUG00015007400) #15 ENSNFUG00015007405 prok2 (ENSNFUG00015007407) RYBP (ENSNFUG00015007410) #19 SHQ1 (ENSNFUG00015007416) #20 ENSNFUG00015007428 GXYLT2 (ENSNFUG00015007433) #21 ppp4r2b (ENSNFUG00015007437) #22 ENSNFUG00015007441 ENSNFUG00015007444 ENSNFUG00015007448 pdzrn3b (ENSNFUG00015007455) #23 ENSNFUG00015007495 ENSNFUG00015007499 ENSNFUG00015007504 CABZ01012080.1 (ENSNFUG00015007569) ##30 ENSNFUG00015007836 ENSNFUG00015007838 ENSNFUG00015007844 ENSNFUG00015008041 ENSNFUG00015011202 BX942846.1 (ENSNFUG00015011465) ENSNFUG00015015331 Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00390000009678 #32 ENSGT00940000175464 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000177762 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Poecilia ANCESTRAL SPECIES 112 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000154917.ab ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 NAME_6 ANCESTRAL SPECIES 528 ENSGT00390000007605 #20 ENSGT00940000154917.ab ENSGT00940000158065 #21 ENSGT00940000162859.o #22 Amazon molly MODERN SPECIES 825 shq1 (ENSPFOG00000003118) #20 ENSPFOG00000019919 gxylt2 (ENSPFOG00000003222) #21 ppp4r2b (ENSPFOG00000003300) #22 Sailfin molly MODERN SPECIES 3319 ppp4r2b (ENSPLAG00000001782) #22 ENSPLAG00000001749 Guppy MODERN SPECIES 457 ENSPREG00000001057 ENSPREG00000001053 ENSPREG00000000802 ENSPREG00000000756 zgc:113054 (ENSPREG00000000737) ENSPREG00000000721 foxp1b (ENSPREG00000000697) EIF4E3 (ENSPREG00000000653) #15 gpr27 (ENSPREG00000000634) #16 rybpa (ENSPREG00000000603) #19 shq1 (ENSPREG00000000591) #20 NFYB (ENSPREG00000022546) ENSPREG00000022542 gxylt2 (ENSPREG00000022537) #21 ppp4r2b (ENSPREG00000022528) #22 pdzrn3b (ENSPREG00000022505) #23 eno1b (ENSPREG00000022481) ZMYND8 (ENSPREG00000022470) ENSPREG00000022458 ogfr2 (ENSPREG00000022446) ENSPREG00000022442 KLHL10 (ENSPREG00000022434) NCOA3 (ENSPREG00000022421) id1 (ENSPREG00000022414) sulf2a (ENSPREG00000022391) arhgap46a (ENSPREG00000022372) ENSPREG00000022365 ndrg3a (ENSPREG00000022358) ENSPREG00000022344 trpc4apa (ENSPREG00000022319) Platyfish MODERN SPECIES 12 zgc:113054 (ENSXMAG00000028801) ENSXMAG00000025053 foxp1b (ENSXMAG00000004164) EIF4E3 (ENSXMAG00000002188) #15 gpr27 (ENSXMAG00000020236) #16 rybpa (ENSXMAG00000027089) #19 ENSXMAG00000025660 gxylt2 (ENSXMAG00000004758) #21 ppp4r2b (ENSXMAG00000004727) #22 pdzrn3b (ENSXMAG00000004695) #23 ENSXMAG00000005896 ##30 ENSXMAG00000017082 ENSXMAG00000005795 cntn4 (ENSXMAG00000005772) ENSXMAG00000025010 cdk5rap1 (ENSXMAG00000007903) ENSXMAG00000006111 ENSXMAG00000007917 rpn2 (ENSXMAG00000007919) mybl2b (ENSXMAG00000007939) ift52 (ENSXMAG00000009491) acot8 (ENSXMAG00000009510) phactr3b (ENSXMAG00000009514) ENSXMAG00000020168 NAME_4 ANCESTRAL SPECIES 63 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00940000175464 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a Sheepshead minnow MODERN SPECIES 163 trnt1 (ENSCVAG00000019770) #32 ENSCVAG00000019782 arl6ip5a (ENSCVAG00000019799) #9 FRMD4B (ENSCVAG00000019832) #11 mitfa (ENSCVAG00000019875) #12 ENSCVAG00000019895 zgc:113054 (ENSCVAG00000019960) foxp1b (ENSCVAG00000019977) EIF4E3 (ENSCVAG00000020000) #15 ENSCVAG00000020009 gpr27 (ENSCVAG00000020011) #16 prok2 (ENSCVAG00000020024) rybpa (ENSCVAG00000020045) #19 shq1 (ENSCVAG00000020049) #20 gxylt2 (ENSCVAG00000020052) #21 ppp4r2b (ENSCVAG00000020063) #22 pdzrn3b (ENSCVAG00000020100) #23 ENSCVAG00000020182 ##30 ENSCVAG00000020246 Mummichog MODERN SPECIES 313 trnt1 (ENSFHEG00000019294) #32 ENSFHEG00000019257 arl6ip5a (ENSFHEG00000019240) #9 FRMD4B (ENSFHEG00000019218) #11 ENSFHEG00000019182 mitfa (ENSFHEG00000019131) #12 ENSFHEG00000017933 zgc:113054 (ENSFHEG00000017918) foxp1b (ENSFHEG00000017865) EIF4E3 (ENSFHEG00000017632) #15 gpr27 (ENSFHEG00000017617) #16 prok2 (ENSFHEG00000017583) rybpa (ENSFHEG00000017560) #19 shq1 (ENSFHEG00000017552) #20 gxylt2 (ENSFHEG00000017536) #21 ppp4r2b (ENSFHEG00000017528) #22 pdzrn3b (ENSFHEG00000017519) #23 ENSFHEG00000017494 ##30 ENSFHEG00000017415 ENSFHEG00000017387 ##30 ENSFHEG00000017343 ##30 cntn4 (ENSFHEG00000017318) EPB41L1 (ENSFHEG00000017266) ENSFHEG00000017248 cdk5rap1 (ENSFHEG00000017181) ENSFHEG00000017137 rpn2 (ENSFHEG00000017125) mybl2b (ENSFHEG00000017018) ift52 (ENSFHEG00000017007) acot8 (ENSFHEG00000016969) phactr3b (ENSFHEG00000016939) Oryzias ANCESTRAL SPECIES 1 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.b ENSGT00970000193381.a.a.a.a.b.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000155865.c.b #15 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Oryzias_b ANCESTRAL SPECIES 3 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.b ENSGT00970000193381.a.a.a.a.b.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000155865.c.b #15 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00940000169850 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a Indian medaka MODERN SPECIES 8 aldh4a1 (ENSOMEG00000001286) ENSOMEG00000001284 ENSOMEG00000001281 AMIGO3 (ENSOMEG00000001277) ENSOMEG00000001275 ENSOMEG00000001272 GRM7 (ENSOMEG00000001268) nicn1 (ENSOMEG00000001258) dag1 (ENSOMEG00000001249) ENSOMEG00000001245 EIF4E3 (ENSOMEG00000001240) #15 prok2 (ENSOMEG00000001233) RYBP (ENSOMEG00000001230) #19 shq1 (ENSOMEG00000001225) #20 gxylt2 (ENSOMEG00000001223) #21 ppp4r2b (ENSOMEG00000001220) #22 pdzrn3b (ENSOMEG00000001216) #23 ENSOMEG00000001211 ##30 ENSOMEG00000001197 ENSOMEG00000001186 cntn4 (ENSOMEG00000001171) ENSOMEG00000001158 ENSOMEG00000001148 cdk5rap1 (ENSOMEG00000001144) ENSOMEG00000001139 rpn2 (ENSOMEG00000001134) mybl2b (ENSOMEG00000001127) ift52 (ENSOMEG00000001125) acot8 (ENSOMEG00000001122) phactr3b (ENSOMEG00000001120) PPP1R3D (ENSOMEG00000001117) Javanese ricefish MODERN SPECIES 19 AMIGO3 (ENSOJAG00000006140) RNF123 (ENSOJAG00000004657) ENSOJAG00000004546 ENSOJAG00000004517 GRM7 (ENSOJAG00000004119) ENSOJAG00000003991 nicn1 (ENSOJAG00000003956) ENSOJAG00000003948 dag1 (ENSOJAG00000003940) EIF4E3 (ENSOJAG00000003890) #15 prok2 (ENSOJAG00000003872) RYBP (ENSOJAG00000003861) #19 ENSOJAG00000003841 #19 shq1 (ENSOJAG00000003807) #20 gxylt2 (ENSOJAG00000003792) #21 ppp4r2b (ENSOJAG00000023860) #22 pdzrn3b (ENSOJAG00000023854) #23 ENSOJAG00000023757 ##30 ENSOJAG00000023350 ENSOJAG00000022411 cntn4 (ENSOJAG00000021484) ENSOJAG00000021073 ENSOJAG00000020981 ENSOJAG00000020889 rpn2 (ENSOJAG00000020530) mybl2b (ENSOJAG00000020440) ift52 (ENSOJAG00000020357) acot8 (ENSOJAG00000020331) phactr3b (ENSOJAG00000020321) PPP1R3D (ENSOJAG00000020305) ENSOJAG00000020072 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00390000011581 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000165667 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000165371.a ENSGT00940000155198.A ##30 ENSGT00950000183062.a.a.a #23 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00390000007605 #20 ENSGT00390000013995.b.a #19 ENSGT00940000167138 ENSGT00940000155865.c.b #15 ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 Japanese Medaka HdrR MODERN SPECIES 19 rpn2 (ENSORLG00000011590) ENSORLG00000022015 cdk5rap1 (ENSORLG00000011531) ENSORLG00000011457 ENSORLG00000011409 ENSORLG00000028932 cntn4 (ENSORLG00000011392) ENSORLG00000025901 ENSORLG00000011363 ENSORLG00000011220 ENSORLG00000029566 ENSORLG00000027420 ENSORLG00000011105 ##30 pdzrn3b (ENSORLG00000011027) #23 gxylt2 (ENSORLG00000011004) #21 ppp4r2b (ENSORLG00000010996) #22 shq1 (ENSORLG00000023538) #20 rybpa (ENSORLG00000030260) #19 prok2 (ENSORLG00000026685) EIF4E3 (ENSORLG00000010970) #15 dag1 (ENSORLG00000010935) ENSORLG00000024220 nicn1 (ENSORLG00000010901) ENSORLG00000030265 ENSORLG00000010879 ENSORLG00000028895 ENSORLG00000010874 ENSORLG00000023877 AMIGO3 (ENSORLG00000010862) RNF123 (ENSORLG00000010855) aldh4a1 (ENSORLG00000010810) Chinese medaka MODERN SPECIES 3326 ppp4r2b (ENSOSIG00000002117) #22 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Pomacentridae ANCESTRAL SPECIES 33 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT00940000175705 ENSGT00620000088018 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT00620000088018 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a Amphiprion ANCESTRAL SPECIES 38 ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT00620000088018 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a Orange clownfish MODERN SPECIES 20 setmar (ENSAPEG00000022737) #36 lrrn1 (ENSAPEG00000022732) #34 ENSAPEG00000022640 trnt1 (ENSAPEG00000022627) #32 arl6ip5a (ENSAPEG00000022602) #9 FRMD4B (ENSAPEG00000022527) #11 mitfa (ENSAPEG00000022061) #12 zgc:113054 (ENSAPEG00000021963) foxp1b (ENSAPEG00000021804) EIF4E3 (ENSAPEG00000021766) #15 gpr27 (ENSAPEG00000021757) #16 prok2 (ENSAPEG00000021745) rybpa (ENSAPEG00000021704) #19 shq1 (ENSAPEG00000021686) #20 gxylt2 (ENSAPEG00000021661) #21 ppp4r2b (ENSAPEG00000021643) #22 pdzrn3b (ENSAPEG00000021602) #23 ENSAPEG00000021462 ##30 ENSAPEG00000021372 ENSAPEG00000021335 ##30 ENSAPEG00000021312 cntn4 (ENSAPEG00000021259) EPB41L1 (ENSAPEG00000021204) CFAP57 (ENSAPEG00000021147) ENSAPEG00000021075 cdk5rap1 (ENSAPEG00000021049) ghrh (ENSAPEG00000021042) rpn2 (ENSAPEG00000020940) mybl2b (ENSAPEG00000020824) ift52 (ENSAPEG00000020787) srsf6b (ENSAPEG00000020746) Clown anemonefish MODERN SPECIES 3418 rybpa (ENSAOCG00000001679) #19 shq1 (ENSAOCG00000023311) #20 gxylt2 (ENSAOCG00000023295) #21 ppp4r2b (ENSAOCG00000023285) #22 pdzrn3b (ENSAOCG00000023264) #23 ak7a (ENSAOCG00000001676) ENSAOCG00000023113 clu (ENSAOCG00000001667) reps1 (ENSAOCG00000023064) abracl (ENSAOCG00000022998) heca (ENSAOCG00000022989) mtif3 (ENSAOCG00000022968) ENSAOCG00000022958 knstrn (ENSAOCG00000022946) ENSAOCG00000022932 ENSAOCG00000001653 nudt14 (ENSAOCG00000022892) jag2b (ENSAOCG00000022865) esr2a (ENSAOCG00000022759) Spiny chromis MODERN SPECIES 5 setmar (ENSAPOG00000013638) #36 lrrn1 (ENSAPOG00000013646) #34 ENSAPOG00000013653 trnt1 (ENSAPOG00000013687) #32 arl6ip5a (ENSAPOG00000013701) #9 FRMD4B (ENSAPOG00000013741) #11 mitfa (ENSAPOG00000013777) #12 zgc:113054 (ENSAPOG00000013829) foxp1b (ENSAPOG00000014209) EIF4E3 (ENSAPOG00000014276) #15 gpr27 (ENSAPOG00000014287) #16 prok2 (ENSAPOG00000014310) rybpa (ENSAPOG00000014342) #19 shq1 (ENSAPOG00000000397) #20 gxylt2 (ENSAPOG00000014376) #21 ppp4r2b (ENSAPOG00000014386) #22 pdzrn3b (ENSAPOG00000014464) #23 ENSAPOG00000014475 ##30 ENSAPOG00000014540 Bicolor damselfish MODERN SPECIES 2295 ENSSPAG00000007034 ENSSPAG00000007016 ppp4r2b (ENSSPAG00000006987) #22 Cichlidae ANCESTRAL SPECIES 1 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Midas cichlid MODERN SPECIES 319 trnt1 (ENSACIG00000021706) #32 arl6ip5a (ENSACIG00000021665) #9 FRMD4B (ENSACIG00000021534) #11 mitfa (ENSACIG00000021479) #12 ENSACIG00000021462 ENSACIG00000021447 zgc:113054 (ENSACIG00000021422) mdfic2 (ENSACIG00000021414) #13 foxp1b (ENSACIG00000021338) EIF4E3 (ENSACIG00000021312) #15 gpr27 (ENSACIG00000021306) #16 prok2 (ENSACIG00000021289) rybpa (ENSACIG00000021280) #19 shq1 (ENSACIG00000021249) #20 gxylt2 (ENSACIG00000021226) #21 ENSACIG00000021216 #22 pdzrn3b (ENSACIG00000021190) #23 ENSACIG00000021148 ##30 ENSACIG00000021051 ENSACIG00000021023 ##30 ENSACIG00000021005 cntn4 (ENSACIG00000020823) ENSACIG00000020791 EPB41L1 (ENSACIG00000020487) ENSACIG00000020448 cdk5rap1 (ENSACIG00000020401) ghrh (ENSACIG00000020367) rpn2 (ENSACIG00000020345) mybl2b (ENSACIG00000020279) ift52 (ENSACIG00000020246) srsf6b (ENSACIG00000020091) Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a.k ENSGT00940000160361 ENSGT01100000263545.a.b.c.a.l ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 Nile tilapia MODERN SPECIES 17 arl6ip5a (ENSONIG00000029243) #9 FRMD4B (ENSONIG00000020271) #11 mitfa (ENSONIG00000020270) #12 ENSONIG00000041875 ddx4 (ENSONIG00000030953) zgc:113054 (ENSONIG00000020268) mdfic2 (ENSONIG00000035668) #13 foxp1b (ENSONIG00000020267) EIF4E3 (ENSONIG00000020266) #15 gpr27 (ENSONIG00000040990) #16 prok2 (ENSONIG00000030565) rybpa (ENSONIG00000020265) #19 ENSONIG00000030779 shq1 (ENSONIG00000020264) #20 gxylt2 (ENSONIG00000020263) #21 ppp4r2 (ENSONIG00000031128) #22 pdzrn3b (ENSONIG00000020261) #23 ENSONIG00000020260 ##30 ENSONIG00000020259 ENSONIG00000020258 cntn4 (ENSONIG00000020257) ENSONIG00000033511 ENSONIG00000020256 ENSONIG00000020254 CDK5RAP1 (ENSONIG00000020253) ENSONIG00000020252 rpn2 (ENSONIG00000020251) mybl2b (ENSONIG00000020250) ift52 (ENSONIG00000020248) acot8 (ENSONIG00000020247) ENSONIG00000030411 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a.k ENSGT00940000175704 ENSGT01100000263545.a.b.c.a.l ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 Haplochromini ANCESTRAL SPECIES 1 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a.k ENSGT00940000175704 ENSGT01100000263545.a.b.c.a.l ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 Haplochromini_A ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a.k ENSGT00940000175704 ENSGT01100000263545.a.b.c.a.l ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 Haplochromini_B ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a.k ENSGT00940000175704 ENSGT01100000263545.a.b.c.a.l ENSGT00940000165667 ENSGT00940000160361 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b Zebra mbuna MODERN SPECIES 1108 lrrn1 (ENSMZEG00005009199) #34 ENSMZEG00005009157 trnt1 (ENSMZEG00005009141) #32 arl6ip5a (ENSMZEG00005009134) #9 FRMD4B (ENSMZEG00005009091) #11 mitfa (ENSMZEG00005008959) #12 zgc:113054 (ENSMZEG00005008911) mdfic2 (ENSMZEG00005008892) #13 foxp1b (ENSMZEG00005008804) EIF4E3 (ENSMZEG00005008767) #15 gpr27 (ENSMZEG00005008748) #16 prok2 (ENSMZEG00005008722) rybpa (ENSMZEG00005008698) #19 shq1 (ENSMZEG00005008649) #20 gxylt2 (ENSMZEG00005008602) #21 ppp4r2b (ENSMZEG00005008591) #22 pdzrn3b (ENSMZEG00005008554) #23 ENSMZEG00005008531 ##30 ENSMZEG00005008437 ENSMZEG00005008392 ##30 ENSMZEG00005008380 cntn4 (ENSMZEG00005008333) ENSMZEG00005008262 ENSMZEG00005008203 ENSMZEG00005008183 ENSMZEG00005008163 ENSMZEG00005008141 ENSMZEG00005008130 rpn2 (ENSMZEG00005008098) mybl2b (ENSMZEG00005008082) ift52 (ENSMZEG00005008048) Eastern happy MODERN SPECIES 17 ENSACLG00000022206 trnt1 (ENSACLG00000022227) #32 arl6ip5a (ENSACLG00000022278) #9 FRMD4B (ENSACLG00000022299) #11 mitfa (ENSACLG00000022427) #12 ENSACLG00000022536 zgc:113054 (ENSACLG00000022547) mdfic2 (ENSACLG00000022587) #13 foxp1b (ENSACLG00000022616) EIF4E3 (ENSACLG00000022985) #15 gpr27 (ENSACLG00000023012) #16 prok2 (ENSACLG00000023039) rybpa (ENSACLG00000023062) #19 shq1 (ENSACLG00000023077) #20 gxylt2 (ENSACLG00000023097) #21 ppp4r2b (ENSACLG00000023118) #22 pdzrn3b (ENSACLG00000023265) #23 ENSACLG00000023317 ##30 ENSACLG00000023336 ENSACLG00000023351 ENSACLG00000023449 cntn4 (ENSACLG00000023580) ENSACLG00000023605 ENSACLG00000023622 ENSACLG00000023732 ENSACLG00000023768 cdk5rap1 (ENSACLG00000023797) ENSACLG00000023836 ghrh (ENSACLG00000023847) rpn2 (ENSACLG00000023886) mybl2b (ENSACLG00000024029) P. nyererei MODERN SPECIES 316 lrrn1 (ENSPNYG00000003065) #34 ENSPNYG00000003083 trnt1 (ENSPNYG00000003120) #32 arl6ip5a (ENSPNYG00000003159) #9 FRMD4B (ENSPNYG00000003194) #11 mitfa (ENSPNYG00000003348) #12 zgc:113054 (ENSPNYG00000003372) mdfic2 (ENSPNYG00000003404) #13 foxp1b (ENSPNYG00000003448) EIF4E3 (ENSPNYG00000003711) #15 gpr27 (ENSPNYG00000003739) #16 prok2 (ENSPNYG00000003818) rybpa (ENSPNYG00000003852) #19 shq1 (ENSPNYG00000003878) #20 gxylt2 (ENSPNYG00000003893) #21 ppp4r2b (ENSPNYG00000003934) #22 pdzrn3b (ENSPNYG00000003966) #23 ENSPNYG00000004028 ##30 ENSPNYG00000004096 ENSPNYG00000004242 ##30 ENSPNYG00000004264 cntn4 (ENSPNYG00000004297) EPB41L1 (ENSPNYG00000004526) ENSPNYG00000004567 ENSPNYG00000004612 cdk5rap1 (ENSPNYG00000004624) ghrh (ENSPNYG00000004654) rpn2 (ENSPNYG00000004696) mybl2b (ENSPNYG00000004797) ift52 (ENSPNYG00000004919) srsf6b (ENSPNYG00000004944) Burton s mouthbrooder MODERN SPECIES 663 zgc:113054 (ENSHBUG00000010512) mdfic2 (ENSHBUG00000010521) #13 foxp1b (ENSHBUG00000010722) EIF4E3 (ENSHBUG00000010777) #15 gpr27 (ENSHBUG00000010817) #16 prok2 (ENSHBUG00000010821) rybpa (ENSHBUG00000010844) #19 shq1 (ENSHBUG00000010857) #20 gxylt2 (ENSHBUG00000010881) #21 ppp4r2b (ENSHBUG00000010890) #22 pdzrn3b (ENSHBUG00000010947) #23 Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000023604 trnt1 (ENSNBRG00000023606) #32 arl6ip5a (ENSNBRG00000023616) #9 FRMD4B (ENSNBRG00000023651) #11 mitfa (ENSNBRG00000023738) #12 ENSNBRG00000023889 zgc:113054 (ENSNBRG00000023930) foxp1b (ENSNBRG00000023949) EIF4E3 (ENSNBRG00000023984) #15 gpr27 (ENSNBRG00000023989) #16 prok2 (ENSNBRG00000023996) rybpa (ENSNBRG00000023999) #19 shq1 (ENSNBRG00000024004) #20 ENSNBRG00000024008 gxylt2 (ENSNBRG00000024016) #21 ENSNBRG00000000227 #22 pdzrn3b (ENSNBRG00000000238) #23 ENSNBRG00000000246 ENSNBRG00000000266 ##30 ENSNBRG00000000316 ENSNBRG00000000584 ##30 ENSNBRG00000000613 cntn4 (ENSNBRG00000000641) EPB41L1 (ENSNBRG00000000718) ENSNBRG00000000783 ENSNBRG00000000837 cdk5rap1 (ENSNBRG00000000859) Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Eupercaria ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00940000169850 ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581.c ENSGT00940000157154.d #34 ENSGT00940000162663 #36 ENSGT00940000155071.C Tetraodon MODERN SPECIES 2 CHST13 (ENSTNIG00000007368) ENSTNIG00000007367 phactr3b (ENSTNIG00000007366) acot8 (ENSTNIG00000007365) ENSTNIG00000007364 trnt1 (ENSTNIG00000007363) #32 arl6ip5a (ENSTNIG00000007362) #9 FRMD4B (ENSTNIG00000007361) #11 mitfa (ENSTNIG00000007360) #12 foxp1b (ENSTNIG00000007359) EIF4E3 (ENSTNIG00000007358) #15 prok2 (ENSTNIG00000007356) RYBP (ENSTNIG00000007355) #19 shq1 (ENSTNIG00000007354) #20 gxylt2 (ENSTNIG00000007353) #21 ppp4r2b (ENSTNIG00000007352) #22 pdzrn3b (ENSTNIG00000007351) #23 ENSTNIG00000007350 ##30 ENSTNIG00000007349 ENSTNIG00000007348 cntn4 (ENSTNIG00000007347) EPB41L1 (ENSTNIG00000007346) ENSTNIG00000007345 cdk5rap1 (ENSTNIG00000007344) ENSTNIG00000007343 rpn2 (ENSTNIG00000007342) mybl2b (ENSTNIG00000007341) lrrn1 (ENSTNIG00000007340) #34 ITPR1 (ENSTNIG00000007339) bhlhe40 (ENSTNIG00000007338) NAAA (ENSTNIG00000007337) Fugu MODERN SPECIES 10 phactr3b (ENSTRUG00000000766) acot8 (ENSTRUG00000000939) ENSTRUG00000001010 trnt1 (ENSTRUG00000001088) #32 arl6ip5a (ENSTRUG00000019898) #9 FRMD4B (ENSTRUG00000001241) #11 mitfa (ENSTRUG00000001600) #12 ENSTRUG00000031691 foxp1b (ENSTRUG00000001947) EIF4E3 (ENSTRUG00000022670) #15 gpr27 (ENSTRUG00000003935) #16 prok2 (ENSTRUG00000024827) RYBP (ENSTRUG00000009347) #19 shq1 (ENSTRUG00000009446) #20 ENSTRUG00000009592 ppp4r2b (ENSTRUG00000009646) #22 pdzrn3b (ENSTRUG00000009749) #23 ENSTRUG00000009896 ##30 ENSTRUG00000010466 ENSTRUG00000011022 cntn4 (ENSTRUG00000011158) ENSTRUG00000015256 cdk5rap1 (ENSTRUG00000015201) ENSTRUG00000022153 rpn2 (ENSTRUG00000014997) mybl2b (ENSTRUG00000021040) ift52 (ENSTRUG00000014953) ENSTRUG00000027705 lrrn1 (ENSTRUG00000014946) #34 setmar (ENSTRUG00000021227) #36 ITPR1 (ENSTRUG00000023819) Eupecaria_A ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Eupecaria_C ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a European seabass MODERN SPECIES 10 LRRN1 (ENSDLAG00005032471) #34 trnt1 (ENSDLAG00005026509) #32 arl6ip5a (ENSDLAG00005024563) #9 FRMD4B (ENSDLAG00005024483) #11 mitfa (ENSDLAG00005024449) #12 ENSDLAG00005028768 zgc:113054 (ENSDLAG00005024440) ENSDLAG00005024437 foxp1b (ENSDLAG00005024201) gpr27 (ENSDLAG00005024164) #16 EIF4E3 (ENSDLAG00005027715) #15 prok2 (ENSDLAG00005024161) RYBP (ENSDLAG00005024156) #19 shq1 (ENSDLAG00005029441) #20 gxylt2 (ENSDLAG00005024140) #21 ppp4r2b (ENSDLAG00005024099) #22 PDZRN3 (ENSDLAG00005024059) #23 ENSDLAG00005023906 ##30 ENSDLAG00005022052 ENSDLAG00005019553 cntn4 (ENSDLAG00005015182) ENSDLAG00005013781 ENSDLAG00005013604 ENSDLAG00005013516 ENSDLAG00005013482 ENSDLAG00005012669 mybl2b (ENSDLAG00005012484) acot8 (ENSDLAG00005012413) phactr3b (ENSDLAG00005012177) ENSDLAG00005032470 ENSDLAG00005011994 Large yellow croaker MODERN SPECIES traip (ENSLCRG00005022970) grm6b (ENSLCRG00005022971) comtb (ENSLCRG00005023001) SRPK3 (ENSLCRG00005000084) ccdc120b (ENSLCRG00005000159) mbd1b (ENSLCRG00005000194) mitfa (ENSLCRG00005000244) #12 zgc:113054 (ENSLCRG00005000288) foxp1b (ENSLCRG00005000348) EIF4E3 (ENSLCRG00005000492) #15 gpr27 (ENSLCRG00005000493) #16 prok2 (ENSLCRG00005000494) RYBP (ENSLCRG00005000497) #19 shq1 (ENSLCRG00005000499) #20 gxylt2 (ENSLCRG00005000503) #21 ppp4r2b (ENSLCRG00005000505) #22 pdzrn3b (ENSLCRG00005000512) #23 ENSLCRG00005000576 ##30 ENSLCRG00005005149 ENSLCRG00005005415 ENSLCRG00005005460 cntn4 (ENSLCRG00005010873) ENSLCRG00005011993 cdk5rap1 (ENSLCRG00005012007) ENSLCRG00005012062 rpn2 (ENSLCRG00005012068) mybl2b (ENSLCRG00005012317) ift52 (ENSLCRG00005012323) acot8 (ENSLCRG00005012325) phactr3b (ENSLCRG00005012326) ENSLCRG00005012327 Gilthead seabream MODERN SPECIES 20 lrrn1 (ENSSAUG00010020168) #34 ENSSAUG00010020169 trnt1 (ENSSAUG00010020172) #32 arl6ip5a (ENSSAUG00010020174) #9 FRMD4B (ENSSAUG00010020175) #11 mitfa (ENSSAUG00010020177) #12 zgc:113054 (ENSSAUG00010020378) ENSSAUG00010020379 foxp1b (ENSSAUG00010020403) EIF4E3 (ENSSAUG00010020986) #15 gpr27 (ENSSAUG00010020987) #16 prok2 (ENSSAUG00010020989) rybpa (ENSSAUG00010020990) #19 shq1 (ENSSAUG00010020992) #20 gxylt2 (ENSSAUG00010020993) #21 ppp4r2b (ENSSAUG00010020996) #22 pdzrn3b (ENSSAUG00010021000) #23 ENSSAUG00010021023 ##30 ENSSAUG00010022515 ENSSAUG00010022516 ENSSAUG00010022690 ENSSAUG00010027048 cntn4 (ENSSAUG00010027431) EPB41L1 (ENSSAUG00010027538) ENSSAUG00010027547 cdk5rap1 (ENSSAUG00010027549) ghrh (ENSSAUG00010027560) rpn2 (ENSSAUG00010027574) mybl2b (ENSSAUG00010027594) ift52 (ENSSAUG00010027599) acot8 (ENSSAUG00010004111) Perciformes ANCESTRAL SPECIES ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Cottioidei ANCESTRAL SPECIES ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a ENSGT00950000183042.b.b Lumpfish MODERN SPECIES 20 setmar (ENSCLMG00005000422) #36 lrrn1 (ENSCLMG00005000418) #34 ENSCLMG00005000366 trnt1 (ENSCLMG00005000360) #32 arl6ip5a (ENSCLMG00005000354) #9 FRMD4B (ENSCLMG00005000334) #11 mitfa (ENSCLMG00005000306) #12 zgc:113054 (ENSCLMG00005000299) foxp1b (ENSCLMG00005000158) EIF4E3 (ENSCLMG00005000065) #15 gpr27 (ENSCLMG00005020522) #16 prok2 (ENSCLMG00005020521) rybpa (ENSCLMG00005020520) #19 shq1 (ENSCLMG00005020519) #20 gxylt2 (ENSCLMG00005020518) #21 ppp4r2b (ENSCLMG00005020517) #22 pdzrn3b (ENSCLMG00005020516) #23 ENSCLMG00005020484 ##30 ENSCLMG00005020463 ENSCLMG00005020462 ENSCLMG00005020437 ENSCLMG00005020433 cntn4 (ENSCLMG00005020432) EPB41L1 (ENSCLMG00005020214) ENSCLMG00005020168 cdk5rap1 (ENSCLMG00005020152) ghrh (ENSCLMG00005020149) rpn2 (ENSCLMG00005019160) mybl2b (ENSCLMG00005019116) ift52 (ENSCLMG00005019114) acot8 (ENSCLMG00005019113) Stickleback MODERN SPECIES 17 setmar (ENSGACG00000011919) #36 lrrn1 (ENSGACG00000011915) #34 trnt1 (ENSGACG00000011903) #32 arl6ip5a (ENSGACG00000011898) #9 FRMD4B (ENSGACG00000011892) #11 mitfa (ENSGACG00000011875) #12 ENSGACG00000011871 zgc:113054 (ENSGACG00000011845) foxp1b (ENSGACG00000011839) EIF4E3 (ENSGACG00000011825) #15 gpr27 (ENSGACG00000011823) #16 prok2 (ENSGACG00000011815) RYBP (ENSGACG00000011809) #19 shq1 (ENSGACG00000011797) #20 gxylt2 (ENSGACG00000011788) #21 ppp4r2b (ENSGACG00000011779) #22 pdzrn3b (ENSGACG00000011770) #23 ENSGACG00000011748 ##30 ENSGACG00000011735 cntn4 (ENSGACG00000011729) EPB41L1 (ENSGACG00000011718) ENSGACG00000011676 ENSGACG00000011673 apobec2a (ENSGACG00000011671) cacna1sa (ENSGACG00000011658) PLEKHA6 (ENSGACG00000011651) ptprga (ENSGACG00000011636) fezf2 (ENSGACG00000011629) ENSGACG00000011618 nampt2 (ENSGACG00000011613) ENSGACG00000011610 Perciformes_a ANCESTRAL SPECIES 27 ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00390000004207 ENSGT00940000157562.q.a ENSGT00940000161921.e.a Channel bull blenny MODERN SPECIES 19 mitfa (ENSCGOG00000021055) #12 zgc:113054 (ENSCGOG00000021042) foxp1b (ENSCGOG00000020445) EIF4E3 (ENSCGOG00000020423) #15 gpr27 (ENSCGOG00000020421) #16 prok2 (ENSCGOG00000020420) ENSCGOG00000020419 ENSCGOG00000020418 NXPE3 (ENSCGOG00000020414) NXPE3 (ENSCGOG00000020413) ENSCGOG00000020411 NXPE3 (ENSCGOG00000020409) rybpa (ENSCGOG00000020403) #19 shq1 (ENSCGOG00000020389) #20 gxylt2 (ENSCGOG00000020385) #21 ppp4r2b (ENSCGOG00000020375) #22 pdzrn3b (ENSCGOG00000020351) #23 ENSCGOG00000019605 ##30 ENSCGOG00000019577 ENSCGOG00000017817 ENSCGOG00000017020 cntn4 (ENSCGOG00000013869) ENSCGOG00000013152 ENSCGOG00000013047 cdk5rap1 (ENSCGOG00000012950) ghrh (ENSCGOG00000012944) rpn2 (ENSCGOG00000011889) mybl2b (ENSCGOG00000011714) ift52 (ENSCGOG00000011510) acot8 (ENSCGOG00000011504) snrpe (ENSCGOG00000011483) Pike perch MODERN SPECIES 11 setmar (ENSSLUG00000010262) #36 lrrn1 (ENSSLUG00000010263) #34 ENSSLUG00000010265 trnt1 (ENSSLUG00000010274) #32 arl6ip5a (ENSSLUG00000010291) #9 FRMD4B (ENSSLUG00000010314) #11 mitfa (ENSSLUG00000010357) #12 zgc:113054 (ENSSLUG00000010375) foxp1b (ENSSLUG00000010380) EIF4E3 (ENSSLUG00000010383) #15 gpr27 (ENSSLUG00000010385) #16 prok2 (ENSSLUG00000010387) rybpa (ENSSLUG00000010391) #19 shq1 (ENSSLUG00000010395) #20 gxylt2 (ENSSLUG00000010399) #21 ppp4r2b (ENSSLUG00000010404) #22 pdzrn3b (ENSSLUG00000010409) #23 ENSSLUG00000010487 ##30 ENSSLUG00000010897 ENSSLUG00000014659 cntn4 (ENSSLUG00000015218) EPB41L1 (ENSSLUG00000015282) ENSSLUG00000015505 cdk5rap1 (ENSSLUG00000015545) ghrh (ENSSLUG00000015877) rpn2 (ENSSLUG00000016018) mybl2b (ENSSLUG00000016609) ift52 (ENSSLUG00000016763) acot8 (ENSSLUG00000016788) phactr3b (ENSSLUG00000016793) ENSSLUG00000016797 Ballan wrasse MODERN SPECIES 50 ENSLBEG00000010967 gxylt2 (ENSLBEG00000010931) #21 ppp4r2b (ENSLBEG00000010902) #22 pdzrn3b (ENSLBEG00000010826) #23 ENSLBEG00000010750 ##30 ENSLBEG00000010543 cntn4 (ENSLBEG00000010374) ENSLBEG00000010142 ENSLBEG00000010012 ENSLBEG00000009914 cdk5rap1 (ENSLBEG00000009842) ENSLBEG00000009793 rpn2 (ENSLBEG00000009736) mybl2b (ENSLBEG00000009692) ift52 (ENSLBEG00000009649) acot8 (ENSLBEG00000009600) slc41a1 (ENSLBEG00000009491) ENSLBEG00000009430 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Carangaria ANCESTRAL SPECIES 3 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Carangaria_A ANCESTRAL SPECIES 7 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Barramundi perch MODERN SPECIES 150 lrrn1 (ENSLCAG00010026349) #34 ENSLCAG00010026347 trnt1 (ENSLCAG00010026346) #32 arl6ip5a (ENSLCAG00010026345) #9 FRMD4B (ENSLCAG00010026341) #11 mitfa (ENSLCAG00010026304) #12 zgc:113054 (ENSLCAG00010026285) mdfic2 (ENSLCAG00010026283) #13 foxp1b (ENSLCAG00010026063) EIF4E3 (ENSLCAG00010025989) #15 gpr27 (ENSLCAG00010025988) #16 prok2 (ENSLCAG00010025987) rybpa (ENSLCAG00010025986) #19 shq1 (ENSLCAG00010025985) #20 gxylt2 (ENSLCAG00010025984) #21 ppp4r2b (ENSLCAG00010025982) #22 pdzrn3b (ENSLCAG00010025981) #23 ENSLCAG00010025778 ##30 ENSLCAG00010025678 ENSLCAG00010025055 ENSLCAG00010024221 cntn4 (ENSLCAG00010023692) ENSLCAG00010023582 Seriola ANCESTRAL SPECIES 10 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #13 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 Greater amberjack MODERN SPECIES 37 arl6ip5a (ENSSDUG00000012308) #9 FRMD4B (ENSSDUG00000012222) #11 mitfa (ENSSDUG00000012198) #12 ENSSDUG00000012183 zgc:113054 (ENSSDUG00000012153) mdfic2 (ENSSDUG00000012140) #13 foxp1b (ENSSDUG00000012073) EIF4E3 (ENSSDUG00000012045) #15 gpr27 (ENSSDUG00000012040) #16 prok2 (ENSSDUG00000012033) ENSSDUG00000012021 ENSSDUG00000012010 rybpa (ENSSDUG00000012000) #19 shq1 (ENSSDUG00000011986) #20 gxylt2 (ENSSDUG00000011974) #21 ppp4r2b (ENSSDUG00000011939) #22 pdzrn3b (ENSSDUG00000011879) #23 ENSSDUG00000011863 ENSSDUG00000011808 ##30 ENSSDUG00000011773 ENSSDUG00000011750 ##30 ENSSDUG00000011740 cntn4 (ENSSDUG00000011366) EPB41L1 (ENSSDUG00000011310) ENSSDUG00000011234 cdk5rap1 (ENSSDUG00000011169) ghrh (ENSSDUG00000011148) rpn2 (ENSSDUG00000011102) mybl2b (ENSSDUG00000011071) ift52 (ENSSDUG00000011045) ENSSDUG00000011036 Yellowtail amberjack MODERN SPECIES 3081 zgc:113054 (ENSSLDG00000013673) mdfic2 (ENSSLDG00000013706) #13 foxp1b (ENSSLDG00000013751) EIF4E3 (ENSSLDG00000013831) #15 gpr27 (ENSSLDG00000013855) #16 prok2 (ENSSLDG00000013872) rybpa (ENSSLDG00000013888) #19 shq1 (ENSSLDG00000013908) #20 gxylt2 (ENSSLDG00000013934) #21 ppp4r2b (ENSSLDG00000013949) #22 pdzrn3b (ENSSLDG00000013978) #23 ENSSLDG00000014012 ##30 ENSSLDG00000014101 ENSSLDG00000014267 ##30 ENSSLDG00000014289 cntn4 (ENSSLDG00000014310) ENSSLDG00000014388 ENSSLDG00000014581 cdk5rap1 (ENSSLDG00000014608) ghrh (ENSSLDG00000014657) rpn2 (ENSSLDG00000014707) mybl2b (ENSSLDG00000014798) ift52 (ENSSLDG00000014827) ENSSLDG00000014858 acot8 (ENSSLDG00000014866) Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309.l ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 ENSGT00940000157562.q.a Turbot MODERN SPECIES 18 setmar (ENSSMAG00000015405) #36 lrrn1 (ENSSMAG00000015413) #34 ENSSMAG00000026170 trnt1 (ENSSMAG00000015432) #32 arl6ip5a (ENSSMAG00000015475) #9 FRMD4B (ENSSMAG00000015504) #11 mitfa (ENSSMAG00000015617) #12 zgc:113054 (ENSSMAG00000015942) foxp1b (ENSSMAG00000015987) EIF4E3 (ENSSMAG00000016095) #15 gpr27 (ENSSMAG00000016102) #16 prok2 (ENSSMAG00000016123) ENSSMAG00000023389 #19 shq1 (ENSSMAG00000016151) #20 gxylt2 (ENSSMAG00000016180) #21 ppp4r2b (ENSSMAG00000016193) #22 pdzrn3b (ENSSMAG00000016202) #23 ENSSMAG00000016297 ##30 ENSSMAG00000016323 ENSSMAG00000016507 cntn4 (ENSSMAG00000016676) ENSSMAG00000016752 ENSSMAG00000017064 ENSSMAG00000017221 ENSSMAG00000017270 ENSSMAG00000017289 mybl2b (ENSSMAG00000017352) ENSSMAG00000029705 ENSSMAG00000017564 ENSSMAG00000017367 ift52 (ENSSMAG00000017381) Tongue sole MODERN SPECIES 2 msx1a (ENSCSEG00000007275) CYTL1 (ENSCSEG00000007279) EVC2 (ENSCSEG00000007658) EVC (ENSCSEG00000007676) ENSCSEG00000007716 ENSCSEG00000007720 PLXNA1 (ENSCSEG00000007725) foxp1b (ENSCSEG00000007746) EIF4E3 (ENSCSEG00000007779) #15 gpr27 (ENSCSEG00000007794) #16 prok2 (ENSCSEG00000007796) rybpa (ENSCSEG00000007805) #19 ENSCSEG00000007818 shq1 (ENSCSEG00000007829) #20 gxylt2 (ENSCSEG00000007848) #21 ppp4r2b (ENSCSEG00000007869) #22 pdzrn3b (ENSCSEG00000007883) #23 ENSCSEG00000007911 ##30 ENSCSEG00000007957 ENSCSEG00000008067 cntn4 (ENSCSEG00000008117) arl6ip5a (ENSCSEG00000008154) #9 trnt1 (ENSCSEG00000008157) #32 ENSCSEG00000008178 ENSCSEG00000008213 mon1a (ENSCSEG00000008235) grm6b (ENSCSEG00000008243) ENSCSEG00000008263 SRPK3 (ENSCSEG00000008071) CKB (ENSCSEG00000008082) wnt4 (ENSCSEG00000008092) Anabantaria ANCESTRAL SPECIES ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 ENSGT00940000157562.q.a Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000162663 #36 ENSGT00940000157154.d #34 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 #32 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A ##30 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000155448.c.a ENSGT00390000004207 ENSGT00940000157562.q.a Climbing perch MODERN SPECIES 18 lrrn1 (ENSATEG00000008988) #34 ENSATEG00000008955 trnt1 (ENSATEG00000008928) #32 arl6ip5a (ENSATEG00000008916) #9 FRMD4B (ENSATEG00000008872) #11 mitfa (ENSATEG00000008837) #12 zgc:113054 (ENSATEG00000008772) zgc:113054 (ENSATEG00000008721) foxp1b (ENSATEG00000008561) EIF4E3 (ENSATEG00000008530) #15 gpr27 (ENSATEG00000008522) #16 prok2 (ENSATEG00000008492) RYBP (ENSATEG00000029830) #19 shq1 (ENSATEG00000008475) #20 gxylt2 (ENSATEG00000008453) #21 ppp4r2b (ENSATEG00000008426) #22 pdzrn3b (ENSATEG00000008337) #23 ENSATEG00000025437 ENSATEG00000008222 ##30 ENSATEG00000008177 ENSATEG00000008133 cntn4 (ENSATEG00000007710) ENSATEG00000007665 ENSATEG00000007619 ENSATEG00000007641 ENSATEG00000007532 ENSATEG00000007486 mybl2b (ENSATEG00000007465) ift52 (ENSATEG00000007394) ENSATEG00000026560 acot8 (ENSATEG00000007222) Siamese fighting fish MODERN SPECIES 16 setmar (ENSBSLG00000020708) #36 lrrn1 (ENSBSLG00000020709) #34 ENSBSLG00000020712 trnt1 (ENSBSLG00000020713) #32 arl6ip5a (ENSBSLG00000020715) #9 FRMD4B (ENSBSLG00000020719) #11 mitfa (ENSBSLG00000020732) #12 zgc:113054 (ENSBSLG00000020737) foxp1b (ENSBSLG00000020745) EIF4E3 (ENSBSLG00000020777) #15 gpr27 (ENSBSLG00000020778) #16 prok2 (ENSBSLG00000020780) rybpa (ENSBSLG00000020783) #19 shq1 (ENSBSLG00000021007) #20 gxylt2 (ENSBSLG00000021059) #21 ppp4r2b (ENSBSLG00000021096) #22 pdzrn3b (ENSBSLG00000021173) #23 ENSBSLG00000021423 ##30 ENSBSLG00000023123 cntn4 (ENSBSLG00000025556) ENSBSLG00000026064 cdk5rap1 (ENSBSLG00000026216) ENSBSLG00000026226 rpn2 (ENSBSLG00000026247) mybl2b (ENSBSLG00000026297) acot8 (ENSBSLG00000026304) ENSBSLG00000026306 ENSBSLG00000026320 ENSBSLG00000026322 stk35l (ENSBSLG00000026323) ENSBSLG00000026324 Zig-zag eel MODERN SPECIES 19 setmar (ENSMAMG00000023395) #36 lrrn1 (ENSMAMG00000023397) #34 ENSMAMG00000023400 trnt1 (ENSMAMG00000023401) #32 arl6ip5a (ENSMAMG00000023405) #9 FRMD4B (ENSMAMG00000023408) #11 mitfa (ENSMAMG00000023414) #12 zgc:113054 (ENSMAMG00000023417) foxp1b (ENSMAMG00000023423) EIF4E3 (ENSMAMG00000023426) #15 gpr27 (ENSMAMG00000023427) #16 prok2 (ENSMAMG00000023429) RYBP (ENSMAMG00000024392) #19 shq1 (ENSMAMG00000023432) #20 gxylt2 (ENSMAMG00000023433) #21 ppp4r2b (ENSMAMG00000023435) #22 pdzrn3b (ENSMAMG00000023436) #23 ENSMAMG00000023438 ##30 ENSMAMG00000023440 ENSMAMG00000023444 cntn4 (ENSMAMG00000023452) ENSMAMG00000023454 ENSMAMG00000023458 ENSMAMG00000023460 ENSMAMG00000023462 ENSMAMG00000023466 mybl2b (ENSMAMG00000023471) ift52 (ENSMAMG00000023472) srsf6b (ENSMAMG00000025537) acot8 (ENSMAMG00000023478) phactr3b (ENSMAMG00000023479) Cod MODERN SPECIES 4 slc6a1b (ENSGMOG00000003780) ENSGMOG00000007467 ENSGMOG00000035810 ENSGMOG00000007460 #32 arl6ip5a (ENSGMOG00000007454) #9 FRMD4B (ENSGMOG00000007429) #11 mitfa (ENSGMOG00000007421) #12 zgc:113054 (ENSGMOG00000007404) foxp1b (ENSGMOG00000007392) EIF4E3 (ENSGMOG00000007389) #15 gpr27 (ENSGMOG00000007387) #16 prok2 (ENSGMOG00000026303) RYBP (ENSGMOG00000031302) #19 shq1 (ENSGMOG00000007350) #20 gxylt2 (ENSGMOG00000007346) #21 ppp4r2b (ENSGMOG00000007337) #22 pdzrn3b (ENSGMOG00000023182) #23 ENSGMOG00000007303 ##30 ENSGMOG00000007280 ENSGMOG00000029697 ENSGMOG00000006963 ##30 cntn4 (ENSGMOG00000006949) ENSGMOG00000006921 ENSGMOG00000006705 ENSGMOG00000014341 ENSGMOG00000025069 ENSGMOG00000014382 mybl2b (ENSGMOG00000014402) ift52 (ENSGMOG00000014436) srsf6b (ENSGMOG00000014458) ENSGMOG00000023420 Osteoglossiformes ANCESTRAL SPECIES 54 ENSGT00940000156493 ENSGT00390000010697 #7 ENSGT00550000074831.k #8 ENSGT00390000008631.a.o.a #9 ENSGT01020000230354.A.a.a #11 ENSGT00940000156326.a.b #12 ENSGT00940000165309 ENSGT00730000111641 #13 ENSGT00940000165920.b ENSGT00940000155865.d #15 ENSGT00890000139436.A.a #16 ENSGT00940000167138 ENSGT00390000013995.b.a.b #19 ENSGT00390000007605 #20 ENSGT00940000158065 #21 ENSGT00940000162859.o #22 ENSGT00950000183062.a.a.a #23 ENSGT00940000155198.A.a ##30 ENSGT00940000165371.a ENSGT00940000155198.B ##30 ENSGT00940000164786.a Asian bonytongue MODERN SPECIES 14 EOGT (ENSSFOG00015016943) tmf1 (ENSSFOG00015016904) #7 uba3 (ENSSFOG00015016867) #8 arl6ip5a (ENSSFOG00015025753) #9 FRMD4B (ENSSFOG00015016690) #11 mitfa (ENSSFOG00015016521) #12 zgc:113054 (ENSSFOG00015016449) mdfic2 (ENSSFOG00015016439) #13 foxp1b (ENSSFOG00015016318) EIF4E3 (ENSSFOG00015016279) #15 gpr27 (ENSSFOG00015030628) #16 prok2 (ENSSFOG00015016263) RYBP (ENSSFOG00015025952) #19 shq1 (ENSSFOG00015016241) #20 gxylt2 (ENSSFOG00015016186) #21 ppp4r2b (ENSSFOG00015016134) #22 ENSSFOG00015029341 pdzrn3b (ENSSFOG00015016102) #23 ENSSFOG00015016050 ##30 ENSSFOG00015015929 ENSSFOG00015015845 ##30 cntn4 (ENSSFOG00015015791) EPB41L1 (ENSSFOG00015015609) ENSSFOG00015015502 CDK5RAP1 (ENSSFOG00015015455) ENSSFOG00015015437 rpn2 (ENSSFOG00015015349) mybl2b (ENSSFOG00015015284) ift52 (ENSSFOG00015015219) srsf6b (ENSSFOG00015015169) ENSSFOG00015033088 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000162859.p #22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000162859.p #22 Otomorpha ANCESTRAL SPECIES 26 ENSGT00940000160860 ENSGT00940000159295 ENSGT00940000157445 ENSGT00390000009023 ENSGT00940000154343.gb ENSGT00390000003592 ENSGT00390000008187 ENSGT00390000015047 ENSGT00390000018596.B ENSGT00950000183084.b.a.b ENSGT00510000047914.a.b ENSGT00870000136521 ENSGT00390000015408 ENSGT00940000157064.a.a ENSGT00930000151037 ENSGT00940000162859.p #22 ENSGT00940000164703.b ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00940000155448.c.b ENSGT00940000159708 Clupeiformes ANCESTRAL SPECIES ENSGT00940000162859.p #22 Atlantic herring MODERN SPECIES 20 ENSCHAG00000002471 ENSCHAG00000002463 ENSCHAG00000002311 ENSCHAG00000002034 ENSCHAG00000001981 ENSCHAG00000001975 ENSCHAG00000001946 taf8 (ENSCHAG00000001815) xpc (ENSCHAG00000001180) si:dkey-72l14.3 (ENSCHAG00000000922) borcs6 (ENSCHAG00000000752) sema3h (ENSCHAG00000000572) ENSCHAG00000000515 tmem115 (ENSCHAG00000000451) tgm2a (ENSCHAG00000000205) ppp4r2a (ENSCHAG00000024286) #22 PDZRN3 (ENSCHAG00000024277) #23 ENSCHAG00000023632 ENSCHAG00000023335 ENSCHAG00000022342 ENSCHAG00000022308 EPB41L1 (ENSCHAG00000022006) edn3b (ENSCHAG00000021996) ttll9 (ENSCHAG00000021869) ENSCHAG00000021858 ppp1r3da (ENSCHAG00000021849) phactr3a (ENSCHAG00000021830) PIGT (ENSCHAG00000021719) ENSCHAG00000021696 snx21 (ENSCHAG00000021688) srsf6a (ENSCHAG00000021645) Denticle herring MODERN SPECIES 1 zgc:154075 (ENSDCDG00000032987) pax7b (ENSDCDG00000032923) kcnab2b (ENSDCDG00000032873) tmem115 (ENSDCDG00000032870) rhoab (ENSDCDG00000032868) sema3h (ENSDCDG00000032860) ENSDCDG00000032856 borcs6 (ENSDCDG00000032854) si:dkey-72l14.3 (ENSDCDG00000032852) xpc (ENSDCDG00000032800) taf8 (ENSDCDG00000032787) ENSDCDG00000032786 PLXNA2 (ENSDCDG00000030853) ENSDCDG00000030688 ENSDCDG00000030687 ENSDCDG00000030679 #22 ENSDCDG00000030325 smc1al (ENSDCDG00000030163) ndnl2 (ENSDCDG00000030149) ENSDCDG00000025715 ENSDCDG00000025405 RAD54L2 (ENSDCDG00000024984) ENSDCDG00000024976 ENSDCDG00000024974 ENSDCDG00000024971 tmem201 (ENSDCDG00000024967) foxl2l (ENSDCDG00000024965) pik3cd (ENSDCDG00000024282) ctnnbip1 (ENSDCDG00000024247) clstn1 (ENSDCDG00000023609) LZIC (ENSDCDG00000023555) Otophysi ANCESTRAL SPECIES 51 ENSGT00940000163617 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000154897.q ENSGT00940000164303.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a ENSGT00940000163886.B.b.a ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00390000010974 ENSGT00940000160988 ENSGT00390000007823 Characiphysae ANCESTRAL SPECIES 5 ENSGT00940000163617 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000154897.q ENSGT00940000164303.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a ENSGT00940000163886.B.b.a ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000164703.b ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00390000010974 ENSGT00940000160988 Characiphysae_b ANCESTRAL SPECIES 41 ENSGT00940000163617 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000154897.q ENSGT00940000164303.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a ENSGT00940000163886.B.b.a ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000164703.b ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00390000010974 ENSGT00940000160988 Characoidei ANCESTRAL SPECIES 51 ENSGT00940000156537 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000154897.q ENSGT00940000164303.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a ENSGT00940000163886.B.b.a ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000164703.b ENSGT00940000160080 #28 ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00390000010974 ENSGT00940000160988 Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 2571 ENSPNAG00000002854 #22 Red-bellied piranha MODERN SPECIES 2591 ENSPNAG00000013328 #22 Mexicana tetra MODERN SPECIES 6 slc16a7 (ENSAMXG00000039884) ENSAMXG00000017081 ENSAMXG00000017120 zgc:171775 (ENSAMXG00000017218) krt5 (ENSAMXG00000040054) krt8 (ENSAMXG00000036187) krt18a.1 (ENSAMXG00000033930) krt18a.2 (ENSAMXG00000042511) ENSAMXG00000036107 eif4ba (ENSAMXG00000041675) ENSAMXG00000030002 ENSAMXG00000017363 foxp1a (ENSAMXG00000017401) eif4e3 (ENSAMXG00000036675) #15 rybpa (ENSAMXG00000043350) #19 ppp4r2a (ENSAMXG00000037385) #22 PDZRN3 (ENSAMXG00000030758) #23 ENSAMXG00000017525 DLGAP4 (ENSAMXG00000001057) ENSAMXG00000029392 myl9a (ENSAMXG00000041368) pfkfb2a (ENSAMXG00000001046) ENSAMXG00000001044 scube3 (ENSAMXG00000001024) ENSAMXG00000033667 ENSAMXG00000040243 stk35 (ENSAMXG00000035676) pdyn (ENSAMXG00000039841) GMEB2 (ENSAMXG00000001001) DAD1 (ENSAMXG00000036732) tgm1l4 (ENSAMXG00000000991) Electric eel MODERN SPECIES 294 eif4ba (ENSEEEG00000007739) ENSEEEG00000007754 foxp1a (ENSEEEG00000008507) eif4e3 (ENSEEEG00000008740) #15 ENSEEEG00000008744 #19 ppp4r2a (ENSEEEG00000008746) #22 PDZRN3 (ENSEEEG00000008753) #23 ENSEEEG00000008779 ENSEEEG00000008877 ENSEEEG00000008879 ENSEEEG00000008956 ENSEEEG00000009108 edn3b (ENSEEEG00000009132) ttll9 (ENSEEEG00000009134) ENSEEEG00000009137 ppp1r3da (ENSEEEG00000009138) phactr3a (ENSEEEG00000009140) PIGT (ENSEEEG00000009141) wfdc2 (ENSEEEG00000009142) Channel catfish MODERN SPECIES 6 lama5 (ENSIPUG00000005841) mapre1b (ENSIPUG00000006498) prkcbp1l (ENSIPUG00000006572) slc16a7 (ENSIPUG00000006625) ENSIPUG00000006636 ENSIPUG00000006663 zgc:171775 (ENSIPUG00000006710) krt5 (ENSIPUG00000006775) krt8 (ENSIPUG00000006811) krt18a.1 (ENSIPUG00000006843) eif4b (ENSIPUG00000006890) tns2 (ENSIPUG00000006920) foxp1a (ENSIPUG00000007032) eif4e3 (ENSIPUG00000007049) #15 rybpa (ENSIPUG00000007091) #19 ppp4r2a (ENSIPUG00000007160) #22 ENSIPUG00000007259 ENSIPUG00000008245 ENSIPUG00000008304 ENSIPUG00000008376 ttll9 (ENSIPUG00000008388) ENSIPUG00000008408 ppp1r3da (ENSIPUG00000008424) ENSIPUG00000008435 phactr3a (ENSIPUG00000008476) PIGT (ENSIPUG00000008511) wfdc2 (ENSIPUG00000008599) snx21 (ENSIPUG00000008604) haus8 (ENSIPUG00000008618) sac3d1 (ENSIPUG00000008661) mrgbp (ENSIPUG00000008672) Cyprinoidei ANCESTRAL SPECIES ENSGT00940000156537 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000154897.q ENSGT00940000164303.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a ENSGT00940000163886.B.b.a ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000164703.b ENSGT00940000160080 #28 ENSGT00940000164786.b ENSGT00940000155617.A ENSGT00950000183053.C.b ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558.e ENSGT00940000157562.r ENSGT00390000018558.f ENSGT00940000165527 ENSGT00530000063759.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 294 ENSGT00940000164303.b.b.a ENSGT00940000164303.b.b.b ENSGT00940000157877.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000166426.a ENSGT00940000166426.b ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a.a ENSGT00940000163961.a.a.b ENSGT00940000153336.a.a.c ENSGT00940000163886.B.b.a.g.a ENSGT00940000165920.a.c ENSGT00940000155865.c.a.a #15 ENSGT00390000013995.b.a.p.a #19 ENSGT00940000162859.p.c #22 ENSGT00950000183062.a.a.a.l.a #23 ENSGT00940000164703.b.a.b ENSGT00940000160080.f #28 ENSGT00940000164786.b.d.a ENSGT00940000155617.A.i.a ENSGT00950000183053.C.b.c ENSGT00940000159879.a ENSGT00940000154543.c.a.b ENSGT00940000161921.e.b.a ENSGT00530000063859.b.a ENSGT00940000157562.q.b.b ENSGT00390000018558.e Goldfish MODERN SPECIES 15 adrm1 (ENSCARG00000015090) lama5 (ENSCARG00000014937) mapre1b (ENSCARG00000014927) prkcbp1l (ENSCARG00000014594) ENSCARG00000014558 ENSCARG00000014087 zgc:171775 (ENSCARG00000013952) krt8 (ENSCARG00000013919) krt18a.1 (ENSCARG00000013904) krt5 (ENSCARG00000013836) eif4ba (ENSCARG00000013263) ENSCARG00000013092 foxp1a (ENSCARG00000012910) eif4e3 (ENSCARG00000012894) #15 rybpa (ENSCARG00000012887) #19 ppp4r2a (ENSCARG00000012875) #22 PDZRN3 (ENSCARG00000012864) #23 ENSCARG00000012853 ENSCARG00000012842 ENSCARG00000012306 edn3b (ENSCARG00000012250) ttll9 (ENSCARG00000012185) ENSCARG00000012165 ppp1r3da (ENSCARG00000012161) ENSCARG00000012140 phactr3a (ENSCARG00000012085) ENSCARG00000012036 wfdc2 (ENSCARG00000012027) snx21 (ENSCARG00000012020) ENSCARG00000012014 mrgbp (ENSCARG00000012006) Cyprininae_a ANCESTRAL SPECIES 301 ENSGT00940000158762.e.a ENSGT00390000013839.c.a ENSGT00940000156537.i ENSGT00490000043329.a.a.a.vb.a.c.a ENSGT00940000154897.q.b ENSGT00940000164303.b.b.a ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a.b ENSGT00940000166426.a ENSGT00940000163961.a.a.a.b ENSGT00940000163961.a.a.b.a ENSGT00940000153336.a.a.d.a ENSGT00940000163886.B.b.a.g.b ENSGT00940000165920.a.d ENSGT00940000155865.c.a.a #15 ENSGT00390000013995.b.a.p.a #19 ENSGT00940000162859.p.c #22 ENSGT00950000183062.a.a.a.l.a #23 ENSGT00940000164703.b.a.b ENSGT00940000160080.f #28 ENSGT00940000164786.b.d.a ENSGT00940000155617.A.i.a ENSGT00950000183053.C.b.c ENSGT00940000159879.a ENSGT00940000154543.c.a.b ENSGT00940000161921.e.b.a ENSGT00530000063859.b.a ENSGT00940000157562.q.b.b ENSGT00390000018558.f.b Common carp reference MODERN SPECIES 49 lama5 (ENSCCRG00000009016) mapre1b (ENSCCRG00000011200) prkcbp1l (ENSCCRG00000031253) ENSCCRG00000031242 ENSCCRG00000028115 zgc:171775 (ENSCCRG00000011185) krt5 (ENSCCRG00000058161) krt8 (ENSCCRG00000037586) krt18a.1 (ENSCCRG00000065343) krt18a.2 (ENSCCRG00000036558) eif4ba (ENSCCRG00000007881) ENSCCRG00000007907 foxp1a (ENSCCRG00000008776) eif4e3 (ENSCCRG00000012656) #15 rybpa (ENSCCRG00000012671) #19 ppp4r2a (ENSCCRG00000072219) #22 ENSCCRG00000012702 #23 ENSCCRG00000012782 chl1a (ENSCCRG00000032159) #28 ENSCCRG00000052459 ENSCCRG00000036237 edn3b (ENSCCRG00000067248) ttll9 (ENSCCRG00000036170) ENSCCRG00000016001 ppp1r3da (ENSCCRG00000065533) ENSCCRG00000071496 phactr3a (ENSCCRG00000067302) ENSCCRG00000032222 ENSCCRG00000059804 wfdc2 (ENSCCRG00000022864) ENSCCRG00000036135 Golden-line barbel MODERN SPECIES 425 lama5 (ENSSGRG00000041912) mapre1b (ENSSGRG00000041902) prkcbp1l (ENSSGRG00000039217) slc16a7 (ENSSGRG00000039179) ENSSGRG00000039177 ENSSGRG00000037433 zgc:171775 (ENSSGRG00000037390) krt8 (ENSSGRG00000037315) krt18a.1 (ENSSGRG00000037289) ENSSGRG00000037288 eif4ba (ENSSGRG00000037203) ENSSGRG00000037143 foxp1a (ENSSGRG00000037006) eif4e3 (ENSSGRG00000036994) #15 rybpa (ENSSGRG00000036993) #19 ppp4r2a (ENSSGRG00000036989) #22 PDZRN3 (ENSSGRG00000036906) #23 chl1a (ENSSGRG00000036715) #28 ENSSGRG00000036634 ENSSGRG00000036364 edn3b (ENSSGRG00000036363) ttll9 (ENSSGRG00000036362) ppp1r3da (ENSSGRG00000036361) ENSSGRG00000036358 PIGT (ENSSGRG00000036300) wfdc2 (ENSSGRG00000036297) snx21 (ENSSGRG00000036295) ENSSGRG00000036294 ENSSGRG00000036293 mrgbp (ENSSGRG00000036287) eef1a2 (ENSSGRG00000035533) Cyprininae ANCESTRAL SPECIES 392 ENSGT00940000163961.a.a.a.b ENSGT00940000153336.a.a.d ENSGT00940000163886.B.b.a.g.b ENSGT00940000165920.a.d ENSGT00940000155865.c.a.b #15 ENSGT00390000013995.b.a.p.b #19 ENSGT00940000162859.p.d #22 ENSGT00950000183062.a.a.a.l.b #23 ENSGT00940000164703.b.a.a ENSGT00940000160080.e #28 ENSGT00940000164786.b.c ENSGT00940000155617.A.i.b ENSGT00950000183053.C.b.d ENSGT00940000159879.b ENSGT00940000154543.c.a.a ENSGT00940000161921.e.b.b ENSGT00530000063859.b.b ENSGT00940000157562.q.b.a ENSGT00390000018558.f ENSGT00940000165527.b.b ENSGT00530000063759.b.d ENSGT00390000010974 Cyprininae_a ANCESTRAL SPECIES 852 ENSGT00940000162859.p.d #22 ENSGT00950000183062.a.a.a.l.b #23 ENSGT00940000164703.b.a.a Common carp reference MODERN SPECIES 11 osbpl2b (ENSCCRG00000009318) adrm1 (ENSCCRG00000009064) lama5 (ENSCCRG00000009114) mapre1b (ENSCCRG00000031264) slc16a7 (ENSCCRG00000011211) prkcbp1l (ENSCCRG00000011204) ENSCCRG00000069574 ENSCCRG00000014454 krt18a.1 (ENSCCRG00000036542) krt18a.2 (ENSCCRG00000036562) eif4ba (ENSCCRG00000036570) ENSCCRG00000080752 ENSCCRG00000036606 foxp1a (ENSCCRG00000075573) rybpa (ENSCCRG00000044527) #19 ppp4r2a (ENSCCRG00000044531) #22 ENSCCRG00000044548 #23 ENSCCRG00000025925 ENSCCRG00000064527 chl1a (ENSCCRG00000040485) #28 ENSCCRG00000069440 ENSCCRG00000016033 edn3b (ENSCCRG00000055342) ttll9 (ENSCCRG00000016006) ENSCCRG00000077625 ppp1r3da (ENSCCRG00000066232) ENSCCRG00000056662 phactr3a (ENSCCRG00000055593) ENSCCRG00000022888 wfdc2 (ENSCCRG00000032210) snx21 (ENSCCRG00000054403) Golden-line barbel MODERN SPECIES 1206 krt8 (ENSSGRG00000018104) krt18a.1 (ENSSGRG00000018105) krt18a.2 (ENSSGRG00000018107) ENSSGRG00000018108 eif4ba (ENSSGRG00000018109) foxp1a (ENSSGRG00000018210) eif4e3 (ENSSGRG00000018211) #15 rybpa (ENSSGRG00000018223) #19 ppp4r2a (ENSSGRG00000018225) #22 PDZRN3 (ENSSGRG00000018226) #23 ENSSGRG00000018227 ENSSGRG00000018228 Goldfish DUPLICATION Goldfish MODERN SPECIES 1395 slc16a7 (ENSCARG00000049655) ENSCARG00000044904 zgc:171775 (ENSCARG00000044746) krt5 (ENSCARG00000043656) krt18a.1 (ENSCARG00000043604) eif4ba (ENSCARG00000043508) ENSCARG00000040932 foxp1a (ENSCARG00000040645) eif4e3 (ENSCARG00000040605) #15 rybpa (ENSCARG00000040588) #19 ppp4r2a (ENSCARG00000040572) #22 PDZRN3 (ENSCARG00000040550) #23 ENSCARG00000040515 ENSCARG00000040500 ENSCARG00000040489 chl1a (ENSCARG00000039031) #28 Goldfish MODERN SPECIES 854 ENSCARG00000058329 foxp1a (ENSCARG00000057151) eif4e3 (ENSCARG00000057100) #15 rybpa (ENSCARG00000057075) #19 ppp4r2a (ENSCARG00000057058) #22 PDZRN3 (ENSCARG00000057017) #23 Zebrafish MODERN SPECIES 15 mapre1b (ENSDARG00000002659) prkcbp1l (ENSDARG00000011932) slc16a7 (ENSDARG00000021573) ENSDARG00000030262 ENSDARG00000075821 zgc:171775 (ENSDARG00000058381) krt5 (ENSDARG00000058371) krt8 (ENSDARG00000058358) krt18a.1 (ENSDARG00000018404) krt18a.2 (ENSDARG00000058332) eif4ba (ENSDARG00000017439) ENSDARG00000076292 foxp1a (ENSDARG00000004843) eif4e3 (ENSDARG00000005078) #15 rybpa (ENSDARG00000037773) #19 ppp4r2a (ENSDARG00000026540) #22 PDZRN3 (ENSDARG00000073757) #23 ENSDARG00000013647 chl1a (ENSDARG00000077881) #28 ENSDARG00000062880 ENSDARG00000076364 ENSDARG00000113113 edn3b (ENSDARG00000086669) ttll9 (ENSDARG00000062806) ENSDARG00000088505 ppp1r3da (ENSDARG00000077513) ENSDARG00000088950 phactr3a (ENSDARG00000058243) PIGT (ENSDARG00000075842) wfdc2 (ENSDARG00000089187) snx21 (ENSDARG00000062770) Euteleosteomorpha ANCESTRAL SPECIES 44 ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00940000157392.p ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00490000043415.k.b ENSGT00730000110997 Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00940000157392.p ENSGT00440000034918.h ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00730000110997 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 28 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #8 ENSGT00390000008631.a.o.b.e #9 ENSGT00940000159731.e #10 ENSGT01020000230354.A.a.b.f #11 ENSGT00940000156326.a.a.b #12 ENSGT00940000167980 ENSGT00940000155865.c.a.c #15 ENSGT00940000162859.p.e #22 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a ENSGT00440000034918.h ENSGT00950000182973.a.c.a.d.c ENSGT00940000157549.b.a Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #8 ENSGT00390000008631.a.o.b.e #9 ENSGT00940000159731.e #10 ENSGT01020000230354.A.a.b.f #11 ENSGT00940000156326.a.a.b #12 ENSGT00940000167980 ENSGT00940000155865.c.a.c #15 ENSGT00940000162859.p.e #22 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00940000157549.b.a ENSGT00490000043415.k.a.b Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #8 ENSGT00390000008631.a.o.b.e #9 ENSGT00940000159731.e #10 ENSGT01020000230354.A.a.b.f #11 ENSGT00940000156326.a.a.b #12 ENSGT00940000165920.a.a.b ENSGT00940000155865.c.a.c #15 ENSGT00940000162859.p.e #22 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.h ENSGT00950000182973.a.c.a.d.c ENSGT00940000157549.b.a ENSGT00490000043415.k.a.b Rainbow trout MODERN SPECIES 30 ENSOMYG00000049192 ENSOMYG00000043002 ENSOMYG00000042677 ENSOMYG00000053967 ENSOMYG00000042668 ENSOMYG00000042664 UBA3 (ENSOMYG00000042639) #8 ARL6IP5 (ENSOMYG00000042615) #9 LMOD3 (ENSOMYG00000042609) #10 FRMD4B (ENSOMYG00000042574) #11 ENSOMYG00000059232 MITF (ENSOMYG00000042524) #12 foxp1a (ENSOMYG00000042498) ENSOMYG00000042490 ENSOMYG00000042478 #15 ppp4r2a (ENSOMYG00000042472) #22 ENSOMYG00000042446 ENSOMYG00000042428 ENSOMYG00000064683 ENSOMYG00000042422 ENSOMYG00000068047 ENSOMYG00000076775 ENSOMYG00000042405 ENSOMYG00000042400 ENSOMYG00000042384 ENSOMYG00000058885 ENSOMYG00000042365 ENSOMYG00000042354 SMIM29 (ENSOMYG00000042352) ENSOMYG00000048124 ENSOMYG00000042340 Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d ENSGT00550000074831.l.c.b #8 ENSGT00390000008631.a.o.b.e #9 ENSGT00940000159731.e #10 ENSGT01020000230354.A.a.b.f #11 ENSGT00940000156326.a.a.b #12 ENSGT00940000165920.a.a.b ENSGT00940000155865.c.a.c #15 ENSGT00940000162859.p.e #22 ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157983.ab.a.b ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a ENSGT00440000034918.h ENSGT00950000182973.a.c.a.d.c ENSGT00940000157549.b.a ENSGT00490000043415.k.a.b Coho salmon MODERN SPECIES 8 ENSOKIG00005042912 ENSOKIG00005042824 NFASC (ENSOKIG00005040500) slc16a7 (ENSOKIG00005040354) TAFA1 (ENSOKIG00005040334) ENSOKIG00005040314 UBA3 (ENSOKIG00005040230) #8 ARL6IP5 (ENSOKIG00005040201) #9 LMOD3 (ENSOKIG00005040078) #10 FRMD4B (ENSOKIG00005039862) #11 MITF (ENSOKIG00005039723) #12 foxp1a (ENSOKIG00005039693) ENSOKIG00005039684 ENSOKIG00005039672 EIF4E3 (ENSOKIG00005039602) #15 ppp4r2a (ENSOKIG00005039499) #22 OARD1 (ENSOKIG00005039408) SYT2 (ENSOKIG00005039372) ENSOKIG00005039333 ENSOKIG00005039316 ENSOKIG00005038951 GRM4 (ENSOKIG00005038876) ENSOKIG00005038860 SMIM29 (ENSOKIG00005038848) ENSOKIG00005038826 nudt3a (ENSOKIG00005038815) RPS10 (ENSOKIG00005038797) pacsin1a (ENSOKIG00005038719) SPDEF (ENSOKIG00005038702) ILRUN (ENSOKIG00005038686) BLTP3A (ENSOKIG00005038575) Chinook salmon MODERN SPECIES 7 ENSOTSG00005028162 mfsd4ab (ENSOTSG00005028156) lemd1 (ENSOTSG00005028149) PM20D1 (ENSOTSG00005028148) NFASC (ENSOTSG00005019091) slc16a7 (ENSOTSG00005019063) TAFA1 (ENSOTSG00005019061) ENSOTSG00005019059 UBA3 (ENSOTSG00005019024) #8 arl6ip5b (ENSOTSG00005019023) #9 LMOD3 (ENSOTSG00005019021) #10 FRMD4B (ENSOTSG00005019020) #11 MITF (ENSOTSG00005018913) #12 foxp1a (ENSOTSG00005018911) ENSOTSG00005018909 ppp4r2a (ENSOTSG00005018903) #22 eif4e3 (ENSOTSG00005018901) #15 oard1 (ENSOTSG00005018898) SYT2 (ENSOTSG00005018897) ENSOTSG00005018890 ENSOTSG00005018887 ENSOTSG00005018876 GRM4 (ENSOTSG00005018874) ENSOTSG00005018873 SMIM29 (ENSOTSG00005018872) nudt3a (ENSOTSG00005018871) rps10 (ENSOTSG00005018869) pacsin1a (ENSOTSG00005018660) SPDEF (ENSOTSG00005018646) ilrun (ENSOTSG00005018644) SNRPC (ENSOTSG00005018642) Salmo ANCESTRAL SPECIES 16 ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #8 ENSGT00390000008631.a.o.b.e #9 ENSGT01020000230354.A.a.b.f #11 ENSGT00940000156326.a.a.b #12 ENSGT00940000167980 ENSGT00940000155865.c.a.c #15 ENSGT00940000162859.p.e #22 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00940000157549.b.a ENSGT00490000043415.k.a.b River trout MODERN SPECIES 20 ENSSTUG00000028987 ENSSTUG00000029021 mfsd4ab (ENSSTUG00000029198) lemd1 (ENSSTUG00000029224) PM20D1 (ENSSTUG00000029293) NFASC (ENSSTUG00000029450) TAFA1 (ENSSTUG00000032373) TAFA3 (ENSSTUG00000032388) UBA3 (ENSSTUG00000032430) #8 arl6ip5b (ENSSTUG00000032544) #9 FRMD4B (ENSSTUG00000032564) #11 MITF (ENSSTUG00000032663) #12 ENSSTUG00000033123 eif4e3 (ENSSTUG00000033133) #15 ENSSTUG00000033155 ppp4r2a (ENSSTUG00000033167) #22 guca1b (ENSSTUG00000033201) oard1 (ENSSTUG00000033221) SYT2 (ENSSTUG00000033226) ENSSTUG00000033247 ENSSTUG00000033255 ENSSTUG00000033272 GRM4 (ENSSTUG00000033384) ENSSTUG00000033448 ENSSTUG00000033452 ENSSTUG00000033459 nudt3a (ENSSTUG00000033477) rps10 (ENSSTUG00000033496) pacsin1a (ENSSTUG00000033632) SPDEF (ENSSTUG00000033816) ilrun (ENSSTUG00000033830) Atlantic salmon MODERN SPECIES 6 ENSSSAG00000063513 ENSSSAG00000063211 mfsd4ab (ENSSSAG00000089305) lemd1 (ENSSSAG00000063177) ENSSSAG00000091134 ENSSSAG00000063131 ENSSSAG00000042361 ENSSSAG00000041990 ENSSSAG00000114328 ENSSSAG00000041945 #8 PRAF3 (ENSSSAG00000041934) #9 FRMD4B (ENSSSAG00000041833) #11 MITF (ENSSSAG00000040900) #12 ENSSSAG00000040807 ENSSSAG00000040772 ENSSSAG00000040752 #22 ENSSSAG00000091686 ENSSSAG00000040652 ENSSSAG00000110375 ENSSSAG00000103431 ENSSSAG00000108728 ENSSSAG00000040570 ENSSSAG00000040424 ENSSSAG00000085116 ENSSSAG00000065547 ENSSSAG00000039652 SMIM29 (ENSSSAG00000093782) nudt3 (ENSSSAG00000039586) RPS10 (ENSSSAG00000039526) pacsin1 (ENSSSAG00000079319) spdef (ENSSSAG00000079307) Huchen MODERN SPECIES 271 mfsd4ab (ENSHHUG00000017498) lemd1 (ENSHHUG00000017451) ENSHHUG00000017435 NFASC (ENSHHUG00000013247) ENSHHUG00000013215 ENSHHUG00000013198 TAFA1 (ENSHHUG00000013187) TAFA3 (ENSHHUG00000013176) UBA3 (ENSHHUG00000013068) #8 arl6ip5b (ENSHHUG00000013029) #9 LMOD3 (ENSHHUG00000013014) #10 FRMD4B (ENSHHUG00000012885) #11 MITF (ENSHHUG00000012399) #12 foxp1a (ENSHHUG00000012389) eif4e3 (ENSHHUG00000012347) #15 ppp4r2a (ENSHHUG00000012326) #22 guca1b (ENSHHUG00000012323) oard1 (ENSHHUG00000012320) SYT2 (ENSHHUG00000012310) ENSHHUG00000012279 ENSHHUG00000012274 ENSHHUG00000012254 Salmoninae ANCESTRAL SPECIES 10 ENSGT00940000177848 ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #8 ENSGT00390000008631.a.o.b.f #9 ENSGT00940000159731.f #10 ENSGT01020000230354.A.a.b.e #11 ENSGT00940000156326.a.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #15 ENSGT00940000162859.p.f #22 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00940000157067 Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #8 ENSGT00390000008631.a.o.b.f #9 ENSGT00940000159731.f #10 ENSGT01020000230354.A.a.b.e #11 ENSGT00940000156326.a.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #15 ENSGT00940000162859.p.f #22 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00940000157549.b.b ENSGT00490000043415.k.a.a ENSGT00730000110997.i.b Salmo ANCESTRAL SPECIES 4 ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #8 ENSGT00390000008631.a.o.b.f #9 ENSGT00940000159731.f #10 ENSGT01020000230354.A.a.b.e #11 ENSGT00940000156326.a.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #15 ENSGT00940000162859.p.f #22 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00940000157549.b.b ENSGT00490000043415.k.a.a ENSGT00730000110997.i.b River trout MODERN SPECIES 23 PM20D1 (ENSSTUG00000032212) ENSSTUG00000032455 NFASC (ENSSTUG00000032990) ENSSTUG00000037241 TAFA1 (ENSSTUG00000037250) ENSSTUG00000037258 ENSSTUG00000037268 UBA3 (ENSSTUG00000037289) #8 arl6ip5b (ENSSTUG00000037735) #9 LMOD3 (ENSSTUG00000037759) #10 FRMD4B (ENSSTUG00000037769) #11 MITF (ENSSTUG00000037895) #12 MDFIC2 (ENSSTUG00000038012) #13 foxp1a (ENSSTUG00000038017) eif4e3 (ENSSTUG00000038040) #15 ppp4r2a (ENSSTUG00000038058) #22 guca1b (ENSSTUG00000038083) oard1 (ENSSTUG00000038101) SYT2 (ENSSTUG00000038114) ENSSTUG00000038124 ENSSTUG00000038140 GRM4 (ENSSTUG00000038163) ENSSTUG00000038228 ENSSTUG00000038244 ENSSTUG00000038267 ENSSTUG00000038281 rps10 (ENSSTUG00000038295) pacsin1a (ENSSTUG00000038362) SPDEF (ENSSTUG00000038529) ilrun (ENSSTUG00000038535) SNRPC (ENSSTUG00000038548) Atlantic salmon MODERN SPECIES 4 ENSSSAG00000039097 ENSSSAG00000039161 ENSSSAG00000039296 ENSSSAG00000040954 ENSSSAG00000044914 fam19a1 (ENSSSAG00000064370) fam19a4 (ENSSSAG00000086359) ENSSSAG00000083767 UBA3 (ENSSSAG00000064406) #8 ARL6IP5 (ENSSSAG00000098965) #9 LMOD3 (ENSSSAG00000064484) #10 frmd4b (ENSSSAG00000064502) #11 mitf (ENSSSAG00000064604) #12 MDFIC2 (ENSSSAG00000111369) #13 ENSSSAG00000065486 ENSSSAG00000065498 #22 ENSSSAG00000065502 ENSSSAG00000065505 ENSSSAG00000089458 ENSSSAG00000091810 ENSSSAG00000065542 ENSSSAG00000004685 ENSSSAG00000065560 SMIM29 (ENSSSAG00000065565) ENSSSAG00000103559 nudt3a (ENSSSAG00000115927) RPS10 (ENSSSAG00000065595) pacsin1a (ENSSSAG00000074166) SPDEF (ENSSSAG00000039330) SNRPC (ENSSSAG00000039409) ILRUN (ENSSSAG00000079304) Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #8 ENSGT00390000008631.a.o.b.f #9 ENSGT00940000159731.f #10 ENSGT01020000230354.A.a.b.e #11 ENSGT00940000156326.a.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #15 ENSGT00940000162859.p.f #22 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab.a.a ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00940000157549.b.b ENSGT00490000043415.k.a.a ENSGT00730000110997.i.b Rainbow trout MODERN SPECIES 7 ENSOMYG00000049959 ENSOMYG00000068169 ENSOMYG00000010920 ENSOMYG00000066888 ENSOMYG00000032802 ENSOMYG00000048510 ENSOMYG00000054036 UBA3 (ENSOMYG00000033007) #8 ARL6IP5 (ENSOMYG00000033611) #9 LMOD3 (ENSOMYG00000033623) #10 FRMD4B (ENSOMYG00000033633) #11 MITF (ENSOMYG00000033659) #12 ENSOMYG00000058567 foxp1a (ENSOMYG00000033705) ENSOMYG00000033738 #15 ppp4r2a (ENSOMYG00000033725) #22 ENSOMYG00000033756 ENSOMYG00000033774 ENSOMYG00000033784 ENSOMYG00000033803 ENSOMYG00000033831 ENSOMYG00000033863 ENSOMYG00000033908 ENSOMYG00000033921 socs2b (ENSOMYG00000051998) ENSOMYG00000059109 ENSOMYG00000034103 PACSIN1 (ENSOMYG00000033949) SPDEF (ENSOMYG00000034131) ILRUN (ENSOMYG00000034144) ru1c (ENSOMYG00000034165) Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #8 ENSGT00390000008631.a.o.b.f #9 ENSGT00940000159731.f #10 ENSGT01020000230354.A.a.b.e #11 ENSGT00940000156326.a.a.a #12 ENSGT00730000111641.a #13 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #15 ENSGT00940000162859.p.f #22 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab.a.a ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00940000157549.b.b ENSGT00490000043415.k.a.a ENSGT00730000110997.i.b Coho salmon MODERN SPECIES 16 PM20D1 (ENSOKIG00005044871) ENSOKIG00005045308 NFASC (ENSOKIG00005046330) ENSOKIG00005046474 ENSOKIG00005046479 TAFA1 (ENSOKIG00005046480) TAFA3 (ENSOKIG00005046483) UBA3 (ENSOKIG00005046501) #8 arl6ip5b (ENSOKIG00005046677) #9 LMOD3 (ENSOKIG00005046691) #10 FRMD4B (ENSOKIG00005046708) #11 MITF (ENSOKIG00005046858) #12 MDFIC2 (ENSOKIG00005047135) #13 foxp1a (ENSOKIG00005047142) EIF4E3 (ENSOKIG00005047152) #15 ppp4r2a (ENSOKIG00005047161) #22 guca1b (ENSOKIG00005047180) SYT2 (ENSOKIG00005047233) ENSOKIG00005047271 ENSOKIG00005047284 GRM4 (ENSOKIG00005047297) ENSOKIG00005047312 ENSOKIG00005047320 ENSOKIG00005047323 ENSOKIG00005047331 ENSOKIG00005047337 pacsin1a (ENSOKIG00005047396) SPDEF (ENSOKIG00005047452) ILRUN (ENSOKIG00005047463) SNRPC (ENSOKIG00005047480) BLTP3A (ENSOKIG00005047496) Chinook salmon MODERN SPECIES 14 PM20D1 (ENSOTSG00005037191) ENSOTSG00005037331 ENSOTSG00005037343 NFASC (ENSOTSG00005038263) ENSOTSG00005042186 TAFA1 (ENSOTSG00005042187) TAFA3 (ENSOTSG00005042188) UBA3 (ENSOTSG00005042189) #8 arl6ip5b (ENSOTSG00005042307) #9 LMOD3 (ENSOTSG00005042308) #10 FRMD4B (ENSOTSG00005042310) #11 MITF (ENSOTSG00005042311) #12 ENSOTSG00005042349 #13 foxp1a (ENSOTSG00005042350) eif4e3 (ENSOTSG00005042351) #15 ppp4r2a (ENSOTSG00005042352) #22 guca1b (ENSOTSG00005042353) oard1 (ENSOTSG00005042358) SYT2 (ENSOTSG00005042359) ENSOTSG00005042360 ENSOTSG00005042361 GRM4 (ENSOTSG00005042362) ENSOTSG00005042364 ENSOTSG00005042365 ENSOTSG00005042366 ENSOTSG00005042367 rps10 (ENSOTSG00005042368) pacsin1a (ENSOTSG00005042378) SPDEF (ENSOTSG00005042385) ilrun (ENSOTSG00005002613) SNRPC (ENSOTSG00005002615) Huchen MODERN SPECIES 794 ENSHHUG00000037315 ENSHHUG00000037292 PM20D1 (ENSHHUG00000037202) ENSHHUG00000037067 NFASC (ENSHHUG00000037005) ENSHHUG00000037003 TAFA1 (ENSHHUG00000036998) TAFA3 (ENSHHUG00000036992) UBA3 (ENSHHUG00000036941) #8 arl6ip5b (ENSHHUG00000036931) #9 LMOD3 (ENSHHUG00000036929) #10 FRMD4B (ENSHHUG00000036874) #11 mitfb (ENSHHUG00000036835) #12 foxp1a (ENSHHUG00000036828) eif4e3 (ENSHHUG00000036793) #15 ppp4r2a (ENSHHUG00000036772) #22 guca1b (ENSHHUG00000036760) oard1 (ENSHHUG00000036755) SYT2 (ENSHHUG00000036748) ENSHHUG00000036740 ENSHHUG00000036736 Northern pike MODERN SPECIES 11 ENSELUG00000020326 pm20d1.2 (ENSELUG00000001153) ENSELUG00000020287 NFASC (ENSELUG00000020244) ENSELUG00000020122 slc16a7 (ENSELUG00000020094) TAFA1 (ENSELUG00000020069) TAFA3 (ENSELUG00000001047) UBA3 (ENSELUG00000020016) #8 arl6ip5b (ENSELUG00000019922) #9 LMOD3 (ENSELUG00000000874) #10 FRMD4B (ENSELUG00000019897) #11 MITF (ENSELUG00000019860) #12 ENSELUG00000019786 eif4e3 (ENSELUG00000019727) #15 ppp4r2a (ENSELUG00000019694) #22 guca1b (ENSELUG00000019659) oard1 (ENSELUG00000019637) SYT2 (ENSELUG00000019591) ENSELUG00000019559 ENSELUG00000019546 ENSELUG00000019514 GRM4 (ENSELUG00000019340) hmga1a (ENSELUG00000019318) ENSELUG00000019304 nudt3a (ENSELUG00000019268) pacsin1a (ENSELUG00000019245) SPDEF (ENSELUG00000019175) ILRUN (ENSELUG00000029115) SNRPC (ENSELUG00000000815) BLTP3A (ENSELUG00000001377) Acanthomorphata ANCESTRAL SPECIES 3 ENSGT00940000156659 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000156659 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Mangrove rivulus MODERN SPECIES 13 pm20d1.2 (ENSKMAG00000007960) CHIA (ENSKMAG00000008259) ENSKMAG00000009354 NFASC (ENSKMAG00000009570) slc16a7 (ENSKMAG00000009733) TAFA1 (ENSKMAG00000009763) ENSKMAG00000009778 UBA3 (ENSKMAG00000009812) #8 LMOD3 (ENSKMAG00000009885) #10 arl6ip5b (ENSKMAG00000009896) #9 FRMD4B (ENSKMAG00000009928) #11 mitfb (ENSKMAG00000010000) #12 ENSKMAG00000010050 ENSKMAG00000010077 eif4e3 (ENSKMAG00000010167) #15 ppp4r2a (ENSKMAG00000010201) #22 oard1 (ENSKMAG00000010222) guca1b (ENSKMAG00000010238) SYT2 (ENSKMAG00000010271) ENSKMAG00000010344 ENSKMAG00000010374 ENSKMAG00000010408 GRM4 (ENSKMAG00000010513) hmga1a (ENSKMAG00000010571) ENSKMAG00000010586 pacsin1a (ENSKMAG00000010634) ilrun (ENSKMAG00000010704) BLTP3A (ENSKMAG00000010747) taf11 (ENSKMAG00000010780) ANKS1A (ENSKMAG00000010858) ENSKMAG00000011073 Turquoise killifish MODERN SPECIES 1624 ENSNFUG00015022682 ENSNFUG00015022678 CAMTA1 (ENSNFUG00015022619) DNAJC11 (ENSNFUG00015022580) Nfu_g_1_001994 (ENSNFUG00015022570) CDC42L2 (ENSNFUG00015022557) mfsd4ab (ENSNFUG00015022538) ENSNFUG00015022525 PM20D1 (ENSNFUG00015022507) ENSNFUG00015022357 ENSNFUG00015022239 NFASC (ENSNFUG00015021648) slc16a7 (ENSNFUG00015021632) ENSNFUG00015021630 eif4e3 (ENSNFUG00015021616) #15 PPP4R2A (ENSNFUG00015021607) #22 GUCA1B (ENSNFUG00015021604) ENSNFUG00015021602 PRICKLE3 (ENSNFUG00015021599) PLP2 (ENSNFUG00015021593) SYPB (ENSNFUG00015021567) timm17b (ENSNFUG00015021406) PQBP1L (ENSNFUG00015021397) gpkow (ENSNFUG00015021388) ENSNFUG00015021383 ENSNFUG00015021366 IQSEC2 (ENSNFUG00015021046) KDM5C (ENSNFUG00015020916) PDZD4 (ENSNFUG00015020898) ##23 porcn (ENSNFUG00015020872) wdr13 (ENSNFUG00015020741) Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b NAME_4 ANCESTRAL SPECIES 21 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Mummichog MODERN SPECIES 2226 pm20d1.2 (ENSFHEG00000004612) ENSFHEG00000004653 ENSFHEG00000006290 NFASC (ENSFHEG00000006412) ENSFHEG00000006437 slc16a7 (ENSFHEG00000006444) TAFA1 (ENSFHEG00000006457) TAFA3 (ENSFHEG00000006494) UBA3 (ENSFHEG00000006559) #8 arl6ip5b (ENSFHEG00000006570) #9 LMOD3 (ENSFHEG00000006588) #10 mitfb (ENSFHEG00000008148) #12 ENSFHEG00000008230 spc25 (ENSFHEG00000008240) eif4e3 (ENSFHEG00000008279) #15 ENSFHEG00000008293 #22 guca1b (ENSFHEG00000008497) oard1 (ENSFHEG00000008533) SYT2 (ENSFHEG00000008553) ENSFHEG00000008583 ENSFHEG00000008603 ENSFHEG00000008681 GRM4 (ENSFHEG00000008715) hmga1a (ENSFHEG00000008729) SMIM29 (ENSFHEG00000008742) pacsin1a (ENSFHEG00000008762) ilrun (ENSFHEG00000008788) BLTP3A (ENSFHEG00000008944) taf11 (ENSFHEG00000008968) ANKS1A (ENSFHEG00000009266) ENSFHEG00000009324 Sheepshead minnow MODERN SPECIES 199 pm20d1.2 (ENSCVAG00000004157) ENSCVAG00000004135 ENSCVAG00000004114 NFASC (ENSCVAG00000004099) ENSCVAG00000004055 slc16a7 (ENSCVAG00000004047) TAFA1 (ENSCVAG00000004025) TAFA3 (ENSCVAG00000004011) UBA3 (ENSCVAG00000003999) #8 arl6ip5b (ENSCVAG00000003957) #9 LMOD3 (ENSCVAG00000003950) #10 FRMD4B (ENSCVAG00000003936) #11 mitfb (ENSCVAG00000003807) #12 ENSCVAG00000023261 eif4e3 (ENSCVAG00000023205) #15 ENSCVAG00000023190 #22 guca1b (ENSCVAG00000023180) oard1 (ENSCVAG00000023174) SYT2 (ENSCVAG00000023162) ENSCVAG00000023156 ENSCVAG00000023109 ENSCVAG00000023090 GRM4 (ENSCVAG00000023051) hmga1a (ENSCVAG00000023019) SMIM29 (ENSCVAG00000023002) pacsin1a (ENSCVAG00000022993) ilrun (ENSCVAG00000022951) BLTP3A (ENSCVAG00000022934) taf11 (ENSCVAG00000022925) ANKS1A (ENSCVAG00000022892) Poeciliinae ANCESTRAL SPECIES 2 ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Poecilia ANCESTRAL SPECIES 14 ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b NAME_6 ANCESTRAL SPECIES 23 ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b.c ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a.a ENSGT00390000017874.b Sailfin molly MODERN SPECIES 70 NFASC (ENSPLAG00000009852) ENSPLAG00000009375 ENSPLAG00000009358 slc16a7 (ENSPLAG00000009348) slc16a7 (ENSPLAG00000009339) TAFA1 (ENSPLAG00000009318) TAFA3 (ENSPLAG00000009280) UBA3 (ENSPLAG00000009264) #8 arl6ip5b (ENSPLAG00000009197) #9 LMOD3 (ENSPLAG00000009187) #10 FRMD4B (ENSPLAG00000000188) #11 mitfb (ENSPLAG00000008823) #12 ENSPLAG00000008783 ENSPLAG00000008769 eif4e3 (ENSPLAG00000008729) #15 ENSPLAG00000008703 #22 guca1b (ENSPLAG00000008683) oard1 (ENSPLAG00000008591) SYT2 (ENSPLAG00000008579) ENSPLAG00000008507 ENSPLAG00000008487 ENSPLAG00000008453 GRM4 (ENSPLAG00000008102) Amazon molly MODERN SPECIES 370 ENSPFOG00000005640 NFASC (ENSPFOG00000005896) ENSPFOG00000006304 ENSPFOG00000006353 slc16a7 (ENSPFOG00000006357) TAFA1 (ENSPFOG00000006406) TAFA3 (ENSPFOG00000006440) UBA3 (ENSPFOG00000006475) #8 arl6ip5b (ENSPFOG00000006581) #9 LMOD3 (ENSPFOG00000006617) #10 FRMD4B (ENSPFOG00000006714) #11 mitfb (ENSPFOG00000007171) #12 ENSPFOG00000007399 ENSPFOG00000007428 eif4e3 (ENSPFOG00000007551) #15 ENSPFOG00000007627 #22 guca1b (ENSPFOG00000007725) oard1 (ENSPFOG00000007773) SYT2 (ENSPFOG00000007780) ENSPFOG00000007908 ENSPFOG00000007912 ENSPFOG00000007918 GRM4 (ENSPFOG00000008171) hmga1a (ENSPFOG00000008457) SMIM29 (ENSPFOG00000008463) pacsin1a (ENSPFOG00000008472) ilrun (ENSPFOG00000008533) BLTP3A (ENSPFOG00000008598) taf11 (ENSPFOG00000008998) ANKS1A (ENSPFOG00000009029) ENSPFOG00000009291 Guppy MODERN SPECIES 459 NFASC (ENSPREG00000004518) ENSPREG00000004551 ENSPREG00000004562 slc16a7 (ENSPREG00000004568) TAFA1 (ENSPREG00000004585) TAFA3 (ENSPREG00000004606) UBA3 (ENSPREG00000004620) #8 arl6ip5b (ENSPREG00000004665) #9 LMOD3 (ENSPREG00000004671) #10 FRMD4B (ENSPREG00000004698) #11 mitfb (ENSPREG00000004738) #12 ENSPREG00000004758 ENSPREG00000004768 eif4e3 (ENSPREG00000004801) #15 ENSPREG00000004819 ENSPREG00000004833 #22 guca1b (ENSPREG00000004858) oard1 (ENSPREG00000004913) SYT2 (ENSPREG00000004950) ENSPREG00000004981 ENSPREG00000005014 ENSPREG00000005065 GRM4 (ENSPREG00000005310) hmga1a (ENSPREG00000005345) ENSPREG00000005354 ilrun (ENSPREG00000005364) BLTP3A (ENSPREG00000005378) taf11 (ENSPREG00000005401) ANKS1A (ENSPREG00000005426) ENSPREG00000005475 scube3 (ENSPREG00000005568) Platyfish MODERN SPECIES ENSXMAG00000024884 NFASC (ENSXMAG00000016316) ENSXMAG00000016379 ENSXMAG00000016383 slc16a7 (ENSXMAG00000016385) TAFA1 (ENSXMAG00000016393) TAFA3 (ENSXMAG00000016396) UBA3 (ENSXMAG00000016399) #8 arl6ip5b (ENSXMAG00000016428) #9 lmod3 (ENSXMAG00000016434) FRMD4B (ENSXMAG00000016435) #11 mitfb (ENSXMAG00000016472) #12 ENSXMAG00000016489 ENSXMAG00000016493 eif4e3 (ENSXMAG00000024672) #15 ENSXMAG00000009582 #22 guca1b (ENSXMAG00000022127) ENSXMAG00000016506 SYT2 (ENSXMAG00000016509) ENSXMAG00000016524 ENSXMAG00000016527 ENSXMAG00000016529 GRM4 (ENSXMAG00000016544) hmga1a (ENSXMAG00000016571) SMIM29 (ENSXMAG00000016573) pacsin1a (ENSXMAG00000016576) ilrun (ENSXMAG00000022264) BLTP3A (ENSXMAG00000016608) taf11 (ENSXMAG00000016646) ANKS1A (ENSXMAG00000016654) ENSXMAG00000022061 Oryzias ANCESTRAL SPECIES 4 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Indian medaka MODERN SPECIES 23 ENSOMEG00000004332 ENSOMEG00000004351 NFASC (ENSOMEG00000004383) ENSOMEG00000004395 ENSOMEG00000004407 slc16a7 (ENSOMEG00000004416) TAFA1 (ENSOMEG00000004432) ENSOMEG00000004448 UBA3 (ENSOMEG00000004466) #8 arl6ip5b (ENSOMEG00000004482) #9 LMOD3 (ENSOMEG00000004488) #10 FRMD4B (ENSOMEG00000004533) #11 mitfb (ENSOMEG00000004573) #12 ENSOMEG00000004624 eif4e3 (ENSOMEG00000004650) #15 ENSOMEG00000004679 #22 guca1b (ENSOMEG00000004691) oard1 (ENSOMEG00000004709) SYT2 (ENSOMEG00000004746) ENSOMEG00000004820 ENSOMEG00000004839 ENSOMEG00000004950 GRM4 (ENSOMEG00000005033) hmga1a (ENSOMEG00000005055) SMIM29 (ENSOMEG00000005067) pacsin1a (ENSOMEG00000005086) ilrun (ENSOMEG00000005106) BLTP3A (ENSOMEG00000005127) taf11 (ENSOMEG00000005158) ANKS1A (ENSOMEG00000005364) ENSOMEG00000005444 Javanese ricefish MODERN SPECIES 21 pm20d1.2 (ENSOJAG00000009665) ENSOJAG00000008913 ENSOJAG00000008820 NFASC (ENSOJAG00000008104) ENSOJAG00000007999 slc16a7 (ENSOJAG00000007947) TAFA1 (ENSOJAG00000007928) ENSOJAG00000007898 UBA3 (ENSOJAG00000007608) #8 arl6ip5b (ENSOJAG00000007573) #9 LMOD3 (ENSOJAG00000007078) #10 FRMD4B (ENSOJAG00000006745) #11 mitfb (ENSOJAG00000006597) #12 ENSOJAG00000006566 eif4e3 (ENSOJAG00000006325) #15 ENSOJAG00000006313 #22 guca1b (ENSOJAG00000006296) oard1 (ENSOJAG00000006290) SYT2 (ENSOJAG00000006280) ENSOJAG00000006263 ENSOJAG00000006258 ENSOJAG00000006093 GRM4 (ENSOJAG00000005734) hmga1a (ENSOJAG00000023934) SMIM29 (ENSOJAG00000023933) pacsin1a (ENSOJAG00000023927) ilrun (ENSOJAG00000023925) BLTP3A (ENSOJAG00000023922) taf11 (ENSOJAG00000023920) ANKS1A (ENSOJAG00000023912) ENSOJAG00000023910 Oryzias_a ANCESTRAL SPECIES ENSGT00940000162989.f.b.c.c ENSGT00940000162989.f.b.c.d ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT01090000260066.a.a.d.a.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000013659 ENSORLG00000013629 ENSORLG00000029596 ENSORLG00000024222 ENSORLG00000029358 slc16a7 (ENSORLG00000013616) TAFA1 (ENSORLG00000027193) ENSORLG00000013573 UBA3 (ENSORLG00000013554) #8 arl6ip5b (ENSORLG00000013502) #9 LMOD3 (ENSORLG00000013486) #10 FRMD4B (ENSORLG00000013479) #11 mitfb (ENSORLG00000013461) #12 ENSORLG00000013419 EIF4E3 (ENSORLG00000013391) #15 ENSORLG00000025571 #22 guca1b (ENSORLG00000013359) oard1 (ENSORLG00000013349) SYT2 (ENSORLG00000013338) ENSORLG00000013293 ENSORLG00000013284 ENSORLG00000013280 ENSORLG00000025216 ENSORLG00000013266 ENSORLG00000026301 SMIM29 (ENSORLG00000022781) pacsin1a (ENSORLG00000013207) ILRUN (ENSORLG00000013188) ENSORLG00000023178 BLTP3A (ENSORLG00000013171) taf11 (ENSORLG00000013132) Chinese medaka MODERN SPECIES 38 mfsd4ab (ENSOSIG00000004155) lemd1 (ENSOSIG00000004147) pm20d1.2 (ENSOSIG00000001811) ENSOSIG00000023720 ENSOSIG00000023712 slc16a7 (ENSOSIG00000023706) TAFA1 (ENSOSIG00000023704) TAFA3 (ENSOSIG00000023703) UBA3 (ENSOSIG00000023700) #8 arl6ip5b (ENSOSIG00000023686) #9 LMOD3 (ENSOSIG00000023685) #10 FRMD4B (ENSOSIG00000023683) #11 mitfb (ENSOSIG00000023681) #12 ENSOSIG00000023675 eif4e3 (ENSOSIG00000023673) #15 ENSOSIG00000023671 #22 guca1b (ENSOSIG00000023670) oard1 (ENSOSIG00000023667) SYT2 (ENSOSIG00000023665) ENSOSIG00000023663 ENSOSIG00000023662 ENSOSIG00000023660 ENSOSIG00000023658 GRM4 (ENSOSIG00000023620) ENSOSIG00000023598 SMIM29 (ENSOSIG00000023597) pacsin1a (ENSOSIG00000023593) ENSOSIG00000023589 BLTP3A (ENSOSIG00000023588) taf11 (ENSOSIG00000023585) ANKS1A (ENSOSIG00000023579) Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Pomacentridae_A ANCESTRAL SPECIES 24 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Spiny chromis MODERN SPECIES 565 ENSAPOG00000016693 ENSAPOG00000016665 NFASC (ENSAPOG00000016655) ENSAPOG00000016633 ENSAPOG00000016626 slc16a7 (ENSAPOG00000016612) TAFA1 (ENSAPOG00000016587) ENSAPOG00000016575 UBA3 (ENSAPOG00000016547) #8 arl6ip5b (ENSAPOG00000016453) #9 LMOD3 (ENSAPOG00000016412) #10 FRMD4B (ENSAPOG00000016261) #11 mitfb (ENSAPOG00000016236) #12 ENSAPOG00000016170 eif4e3 (ENSAPOG00000016094) #15 ppp4r2a (ENSAPOG00000016057) #22 oard1 (ENSAPOG00000016040) guca1b (ENSAPOG00000015997) SYT2 (ENSAPOG00000015840) ENSAPOG00000015754 ENSAPOG00000015738 ENSAPOG00000015732 Amphiprion ANCESTRAL SPECIES 15 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988.cb ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Clown anemonefish MODERN SPECIES 1283 dnajc5aa (ENSAOCG00000002083) GID8 (ENSAOCG00000022305) ENSAOCG00000001632 ENSAOCG00000022388 ENSAOCG00000022399 slc16a7 (ENSAOCG00000022408) ENSAOCG00000022419 ENSAOCG00000022434 UBA3 (ENSAOCG00000002690) #8 arl6ip5b (ENSAOCG00000001639) #9 LMOD3 (ENSAOCG00000022546) #10 FRMD4B (ENSAOCG00000022672) #11 MITF (ENSAOCG00000022699) #12 ENSAOCG00000022757 eif4e3 (ENSAOCG00000022785) #15 ppp4r2a (ENSAOCG00000022804) #22 guca1b (ENSAOCG00000002085) oard1 (ENSAOCG00000022871) SYT2 (ENSAOCG00000022906) ENSAOCG00000022927 ENSAOCG00000001658 ENSAOCG00000023054 GRM4 (ENSAOCG00000023110) hmga1a (ENSAOCG00000023138) ENSAOCG00000002496 pacsin1a (ENSAOCG00000023170) SPDEF (ENSAOCG00000023268) ilrun (ENSAOCG00000023296) BLTP3A (ENSAOCG00000023342) taf11 (ENSAOCG00000023354) ANKS1A (ENSAOCG00000023461) Bicolor damselfish MODERN SPECIES 240 ENSSPAG00000018463 ENSSPAG00000018820 ENSSPAG00000018846 ENSSPAG00000018972 ENSSPAG00000019032 slc16a7 (ENSSPAG00000019045) ENSSPAG00000019062 ENSSPAG00000019078 UBA3 (ENSSPAG00000019100) #8 arl6ip5b (ENSSPAG00000019164) #9 LMOD3 (ENSSPAG00000019172) #10 FRMD4B (ENSSPAG00000019183) #11 MITF (ENSSPAG00000019214) #12 ENSSPAG00000019266 eif4e3 (ENSSPAG00000019336) #15 ppp4r2a (ENSSPAG00000019361) #22 guca1b (ENSSPAG00000019383) oard1 (ENSSPAG00000019457) SYT2 (ENSSPAG00000019493) ENSSPAG00000019616 ENSSPAG00000019628 ENSSPAG00000019670 GRM4 (ENSSPAG00000000106) ENSSPAG00000000137 Cichlidae ANCESTRAL SPECIES ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Lyretail cichlid MODERN SPECIES 321 PM20D1 (ENSNBRG00000010954) ENSNBRG00000011096 ENSNBRG00000011252 NFASC (ENSNBRG00000011672) ENSNBRG00000011811 ENSNBRG00000011819 slc16a7 (ENSNBRG00000011835) ENSNBRG00000011857 TAFA3 (ENSNBRG00000011866) UBA3 (ENSNBRG00000011885) #8 arl6ip5b (ENSNBRG00000011929) #9 FRMD4B (ENSNBRG00000011966) #11 mitfb (ENSNBRG00000012137) #12 ENSNBRG00000012176 eif4e3 (ENSNBRG00000012239) #15 ENSNBRG00000012260 #22 oard1 (ENSNBRG00000012273) guca1b (ENSNBRG00000012287) SYT2 (ENSNBRG00000012295) ENSNBRG00000012353 ENSNBRG00000012364 ENSNBRG00000012393 GRM4 (ENSNBRG00000012602) hmga1a (ENSNBRG00000012619) SMIM29 (ENSNBRG00000012639) pacsin1a (ENSNBRG00000012655) ilrun (ENSNBRG00000012669) BLTP3A (ENSNBRG00000012691) taf11 (ENSNBRG00000012729) ENSNBRG00000012735 ENSNBRG00000012744 Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Burton s mouthbrooder MODERN SPECIES 346 ENSHBUG00000006522 ENSHBUG00000006542 NFASC (ENSHBUG00000007430) ENSHBUG00000007465 ENSHBUG00000007471 slc16a7 (ENSHBUG00000000891) TAFA1 (ENSHBUG00000000195) TAFA3 (ENSHBUG00000007504) UBA3 (ENSHBUG00000007609) #8 arl6ip5b (ENSHBUG00000007634) #9 LMOD3 (ENSHBUG00000007688) #10 FRMD4B (ENSHBUG00000007720) #11 mitfb (ENSHBUG00000007780) #12 ENSHBUG00000007818 eif4e3 (ENSHBUG00000007849) #15 ENSHBUG00000001185 #22 guca1b (ENSHBUG00000007882) oard1 (ENSHBUG00000007914) SYT2 (ENSHBUG00000007924) ENSHBUG00000007957 ENSHBUG00000007975 ENSHBUG00000008020 GRM4 (ENSHBUG00000008056) ENSHBUG00000008088 SMIM29 (ENSHBUG00000008097) pacsin1a (ENSHBUG00000008147) ilrun (ENSHBUG00000008175) BLTP3A (ENSHBUG00000008196) taf11 (ENSHBUG00000008209) ANKS1A (ENSHBUG00000008381) ENSHBUG00000008402 Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000163880 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b P. nyererei MODERN SPECIES 339 ENSPNYG00000016630 ENSPNYG00000017192 ENSPNYG00000017214 ENSPNYG00000017376 ENSPNYG00000017387 slc16a7 (ENSPNYG00000017400) ENSPNYG00000017410 TAFA3 (ENSPNYG00000017420) UBA3 (ENSPNYG00000017442) #8 arl6ip5b (ENSPNYG00000017500) #9 lmod3 (ENSPNYG00000017518) FRMD4B (ENSPNYG00000017559) #11 mitfb (ENSPNYG00000017638) #12 ENSPNYG00000017690 eif4e3 (ENSPNYG00000017704) #15 ENSPNYG00000017730 #22 oard1 (ENSPNYG00000017743) guca1b (ENSPNYG00000017770) SYT2 (ENSPNYG00000017859) ENSPNYG00000017879 ENSPNYG00000017892 ENSPNYG00000017905 GRM4 (ENSPNYG00000018018) hmga1a (ENSPNYG00000018055) SMIM29 (ENSPNYG00000018092) pacsin1a (ENSPNYG00000018149) ilrun (ENSPNYG00000018391) BLTP3A (ENSPNYG00000018412) taf11 (ENSPNYG00000018423) ANKS1A (ENSPNYG00000018443) ENSPNYG00000018474 Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000163880 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Zebra mbuna MODERN SPECIES 1103 ENSMZEG00005026276 ENSMZEG00005026269 NFASC (ENSMZEG00005026266) ENSMZEG00005026264 ENSMZEG00005026263 slc16a7 (ENSMZEG00005026262) ENSMZEG00005026261 ENSMZEG00005026260 UBA3 (ENSMZEG00005026259) #8 arl6ip5b (ENSMZEG00005026258) #9 LMOD3 (ENSMZEG00005026257) #10 FRMD4B (ENSMZEG00005026256) #11 mitfb (ENSMZEG00005026253) #12 ENSMZEG00005026252 eif4e3 (ENSMZEG00005026251) #15 ENSMZEG00005026250 #22 guca1b (ENSMZEG00005026249) oard1 (ENSMZEG00005026247) SYT2 (ENSMZEG00005026246) ENSMZEG00005026245 ENSMZEG00005026244 ENSMZEG00005026230 GRM4 (ENSMZEG00005026226) ENSMZEG00005026223 SMIM29 (ENSMZEG00005026222) pacsin1a (ENSMZEG00005026221) ilrun (ENSMZEG00005026220) BLTP3A (ENSMZEG00005026216) taf11 (ENSMZEG00005026214) ANKS1A (ENSMZEG00005026203) ENSMZEG00005026201 Nile tilapia MODERN SPECIES 12 ENSONIG00000041119 ENSONIG00000016922 NFASC (ENSONIG00000016929) ENSONIG00000016933 slc16a7 (ENSONIG00000016934) TAFA1 (ENSONIG00000016939) TAFA3 (ENSONIG00000030060) UBA3 (ENSONIG00000016941) #8 arl6ip5b (ENSONIG00000016945) #9 LMOD3 (ENSONIG00000041416) #10 FRMD4B (ENSONIG00000016949) #11 mitfb (ENSONIG00000016952) #12 SYT2 (ENSONIG00000016962) ENSONIG00000016955 eif4e3 (ENSONIG00000016959) #15 ENSONIG00000016960 #22 guca1b (ENSONIG00000016961) oard1 (ENSONIG00000039334) ENSONIG00000031575 ENSONIG00000016963 ENSONIG00000016965 GRM4 (ENSONIG00000016968) hmga1a (ENSONIG00000016976) ENSONIG00000029046 pacsin1a (ENSONIG00000016981) ilrun (ENSONIG00000016983) BLTP3A (ENSONIG00000016984) taf11 (ENSONIG00000016989) ANKS1A (ENSONIG00000016990) ENSONIG00000016992 scube3 (ENSONIG00000016993) Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Fugu MODERN SPECIES 15 lemd1 (ENSTRUG00000025279) pm20d1.2 (ENSTRUG00000013196) ENSTRUG00000025560 NFASC (ENSTRUG00000012848) ENSTRUG00000029657 slc16a7 (ENSTRUG00000012600) ENSTRUG00000026858 ENSTRUG00000030074 UBA3 (ENSTRUG00000012359) #8 arl6ip5b (ENSTRUG00000012296) #9 LMOD3 (ENSTRUG00000012256) #10 FRMD4B (ENSTRUG00000031158) #11 mitfb (ENSTRUG00000012080) #12 ENSTRUG00000011898 eif4e3 (ENSTRUG00000029505) #15 ENSTRUG00000011777 #22 guca1b (ENSTRUG00000011703) ENSTRUG00000011698 SYT2 (ENSTRUG00000011452) ENSTRUG00000026763 ENSTRUG00000028060 ENSTRUG00000020555 ENSTRUG00000027214 ENSTRUG00000011185 ENSTRUG00000021298 ENSTRUG00000030849 pacsin1a (ENSTRUG00000011060) SPDEF (ENSTRUG00000011048) ILRUN (ENSTRUG00000011005) BLTP3A (ENSTRUG00000010893) taf11 (ENSTRUG00000021221) Tetraodon MODERN SPECIES 26 kbtbd4 (ENSTNIG00000006550) ddb2 (ENSTNIG00000006551) ENSTNIG00000006552 ENSTNIG00000006554 rapsn (ENSTNIG00000001727) ENSTNIG00000006555 drd4a (ENSTNIG00000006556) PSTK (ENSTNIG00000006574) ACADSB (ENSTNIG00000006575) ENSTNIG00000006608 tsg101a (ENSTNIG00000006609) ENSTNIG00000006613 ENSTNIG00000006614 ENSTNIG00000006615 sncga (ENSTNIG00000006616) ENSTNIG00000006617 #22 kcnk1b (ENSTNIG00000006618) zfp36l1a (ENSTNIG00000002277) ENSTNIG00000001344 ENSTNIG00000006651 ENSTNIG00000006673 RECK (ENSTNIG00000006674) naga (ENSTNIG00000006675) actn1 (ENSTNIG00000006676) dcaf5 (ENSTNIG00000006677) ENSTNIG00000006678 ENSTNIG00000006683 exoc4 (ENSTNIG00000006701) ENSTNIG00000006734 errfi1a (ENSTNIG00000006735) mrps16 (ENSTNIG00000006736) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000161149 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a European seabass MODERN SPECIES 14 lemd1 (ENSDLAG00005010677) pm20d1.2 (ENSDLAG00005010710) ENSDLAG00005011089 ENSDLAG00005027768 ENSDLAG00005011494 ENSDLAG00005030461 ENSDLAG00005014640 ENSDLAG00005034826 ENSDLAG00005026511 UBA3 (ENSDLAG00005014726) #8 ARL6IP5 (ENSDLAG00005015672) #9 LMOD3 (ENSDLAG00005015682) #10 FRMD4B (ENSDLAG00005015693) #11 MITF (ENSDLAG00005016175) #12 ENSDLAG00005016425 ENSDLAG00005032959 #22 ENSDLAG00005029171 ENSDLAG00005016562 ENSDLAG00005032742 ENSDLAG00005016624 ENSDLAG00005016641 ENSDLAG00005016672 hmga1a (ENSDLAG00005016792) ENSDLAG00005030656 pacsin1a (ENSDLAG00005016814) SPDEF (ENSDLAG00005016913) ILRUN (ENSDLAG00005026599) BLTP3A (ENSDLAG00005016949) TAF11 (ENSDLAG00005027404) ANKS1A (ENSDLAG00005017188) ENSDLAG00005018775 Large yellow croaker MODERN SPECIES 487 pm20d1.2 (ENSLCRG00005012768) ENSLCRG00005012818 NFASC (ENSLCRG00005007916) ENSLCRG00005007131 slc16a7 (ENSLCRG00005007129) TAFA1 (ENSLCRG00005007127) ENSLCRG00005007121 UBA3 (ENSLCRG00005006934) #8 arl6ip5b (ENSLCRG00005006858) #9 LMOD3 (ENSLCRG00005006849) #10 FRMD4B (ENSLCRG00005006784) #11 mitfb (ENSLCRG00005005088) #12 ENSLCRG00005004789 ENSLCRG00005004742 eif4e3 (ENSLCRG00005004729) #15 ppp4r2a (ENSLCRG00005004700) #22 guca1b (ENSLCRG00005004667) oard1 (ENSLCRG00005004663) SYT2 (ENSLCRG00005004649) ENSLCRG00005004624 ENSLCRG00005004608 ENSLCRG00005004592 GRM4 (ENSLCRG00005003603) ENSLCRG00005003421 SMIM29 (ENSLCRG00005003415) pacsin1a (ENSLCRG00005022218) SPDEF (ENSLCRG00005022189) ENSLCRG00005022185 ENSLCRG00005022141 ENSLCRG00005022103 ENSLCRG00005022098 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010008142 ENSSAUG00010007727 ENSSAUG00010007222 NFASC (ENSSAUG00010006405) ENSSAUG00010006403 slc16a7 (ENSSAUG00010006402) TAFA1 (ENSSAUG00010006400) TAFA3 (ENSSAUG00010006399) UBA3 (ENSSAUG00010005022) #8 arl6ip5b (ENSSAUG00010005020) #9 LMOD3 (ENSSAUG00010005019) #10 FRMD4B (ENSSAUG00010004427) #11 mitfb (ENSSAUG00010004313) #12 ENSSAUG00010004303 eif4e3 (ENSSAUG00010004299) #15 ppp4r2a (ENSSAUG00010004280) #22 guca1b (ENSSAUG00010004275) oard1 (ENSSAUG00010004272) SYT2 (ENSSAUG00010004264) ENSSAUG00010004255 ENSSAUG00010004252 ENSSAUG00010004241 GRM4 (ENSSAUG00010004196) ENSSAUG00010004159 ENSSAUG00010004092 pacsin1a (ENSSAUG00010023975) SPDEF (ENSSAUG00010023973) ilrun (ENSSAUG00010023972) BLTP3A (ENSSAUG00010023962) taf11 (ENSSAUG00010023960) ANKS1A (ENSSAUG00010023655) Perciformes ANCESTRAL SPECIES 4 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Cottioidei ANCESTRAL SPECIES 2 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a ENSGT00390000017874.b Lumpfish MODERN SPECIES 22 ENSCLMG00005014793 ENSCLMG00005014805 ENSCLMG00005014824 NFASC (ENSCLMG00005016008) ENSCLMG00005016101 slc16a7 (ENSCLMG00005016105) ENSCLMG00005016128 ENSCLMG00005016130 UBA3 (ENSCLMG00005016140) #8 arl6ip5b (ENSCLMG00005016192) #9 LMOD3 (ENSCLMG00005016194) #10 FRMD4B (ENSCLMG00005016199) #11 mitfb (ENSCLMG00005016206) #12 ENSCLMG00005016275 eif4e3 (ENSCLMG00005016277) #15 ENSCLMG00005016281 #22 guca1b (ENSCLMG00005016282) oard1 (ENSCLMG00005016285) SYT2 (ENSCLMG00005016314) ENSCLMG00005016315 ENSCLMG00005002965 ENSCLMG00005002982 GRM4 (ENSCLMG00005003011) ENSCLMG00005003026 SMIM29 (ENSCLMG00005003029) pacsin1a (ENSCLMG00005003034) SPDEF (ENSCLMG00005003041) ILRUN (ENSCLMG00005003045) BLTP3A (ENSCLMG00005003054) taf11 (ENSCLMG00005003060) ANKS1A (ENSCLMG00005003104) Stickleback MODERN SPECIES 11 ENSGACG00000003565 ENSGACG00000003535 NFASC (ENSGACG00000003505) ENSGACG00000003501 ENSGACG00000003497 slc16a7 (ENSGACG00000003483) ENSGACG00000003481 TAFA3 (ENSGACG00000003478) UBA3 (ENSGACG00000003450) #8 arl6ip5b (ENSGACG00000003444) #9 LMOD3 (ENSGACG00000003438) #10 FRMD4B (ENSGACG00000003431) #11 MITF (ENSGACG00000003425) #12 ENSGACG00000003402 eif4e3 (ENSGACG00000003392) #15 ENSGACG00000003388 #22 guca1b (ENSGACG00000003369) oard1 (ENSGACG00000003364) SYT2 (ENSGACG00000003359) ENSGACG00000003354 ENSGACG00000003351 ENSGACG00000003349 ENSGACG00000003339 GRM4 (ENSGACG00000003323) SMIM29 (ENSGACG00000003322) pacsin1a (ENSGACG00000003301) SPDEF (ENSGACG00000003298) ilrun (ENSGACG00000003293) BLTP3A (ENSGACG00000003278) taf11 (ENSGACG00000003275) ANKS1A (ENSGACG00000003255) Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Channel bull blenny MODERN SPECIES 21 ENSCGOG00000022769 ENSCGOG00000023065 ENSCGOG00000023075 NFASC (ENSCGOG00000023362) ENSCGOG00000023452 slc16a7 (ENSCGOG00000023455) TAFA1 (ENSCGOG00000023456) ENSCGOG00000023459 UBA3 (ENSCGOG00000023478) #8 LMOD3 (ENSCGOG00000023691) #10 arl6ip5b (ENSCGOG00000023690) #9 FRMD4B (ENSCGOG00000023692) #11 mitfb (ENSCGOG00000000480) #12 ENSCGOG00000000562 eif4e3 (ENSCGOG00000000575) #15 ppp4r2a (ENSCGOG00000000601) #22 guca1b (ENSCGOG00000000606) oard1 (ENSCGOG00000000615) SYT2 (ENSCGOG00000000622) ENSCGOG00000000630 ENSCGOG00000000634 ENSCGOG00000000639 GRM4 (ENSCGOG00000000653) ENSCGOG00000000668 SMIM29 (ENSCGOG00000000672) pacsin1a (ENSCGOG00000000682) SPDEF (ENSCGOG00000000705) ilrun (ENSCGOG00000000707) BLTP3A (ENSCGOG00000000711) taf11 (ENSCGOG00000000721) ANKS1A (ENSCGOG00000000723) Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Climbing perch MODERN SPECIES 20 ENSATEG00000022234 ENSATEG00000021538 ENSATEG00000020847 ENSATEG00000020585 ENSATEG00000020544 ENSATEG00000026628 ENSATEG00000020528 ENSATEG00000020516 UBA3 (ENSATEG00000020450) #8 ARL6IP5 (ENSATEG00000020415) #9 LMOD3 (ENSATEG00000028174) #10 FRMD4B (ENSATEG00000020382) #11 MITF (ENSATEG00000025665) #12 ENSATEG00000020274 EIF4E3 (ENSATEG00000028400) #15 ENSATEG00000020209 #22 ENSATEG00000026466 ENSATEG00000020099 ENSATEG00000020079 ENSATEG00000020037 ENSATEG00000020017 ENSATEG00000019912 ENSATEG00000019879 hmga1a (ENSATEG00000029103) ENSATEG00000027835 pacsin1a (ENSATEG00000019801) SPDEF (ENSATEG00000019791) ILRUN (ENSATEG00000019774) BLTP3A (ENSATEG00000019758) TAF11 (ENSATEG00000019727) ENSATEG00000019715 Siamese fighting fish MODERN SPECIES 21 ppp4r2a (ENSBSLG00000021795) #22 guca1b (ENSBSLG00000021782) oard1 (ENSBSLG00000021770) Zig-zag eel MODERN SPECIES 21 ENSMAMG00000024194 ENSMAMG00000024192 ENSMAMG00000024190 ENSMAMG00000024189 ENSMAMG00000026766 ENSMAMG00000024187 UBA3 (ENSMAMG00000024186) #8 ARL6IP5 (ENSMAMG00000027048) #9 LMOD3 (ENSMAMG00000024184) #10 FRMD4B (ENSMAMG00000024183) #11 MITF (ENSMAMG00000024182) #12 ENSMAMG00000026584 ENSMAMG00000024181 EIF4E3 (ENSMAMG00000024995) #15 ENSMAMG00000024179 ENSMAMG00000024178 #22 ENSMAMG00000024177 ENSMAMG00000024176 ENSMAMG00000024175 ENSMAMG00000024174 ENSMAMG00000028098 ENSMAMG00000024172 ENSMAMG00000024171 ENSMAMG00000024170 ENSMAMG00000024733 PACSIN1 (ENSMAMG00000024168) SPDEF (ENSMAMG00000024167) ILRUN (ENSMAMG00000024166) BLTP3A (ENSMAMG00000024165) TAF11 (ENSMAMG00000027828) ANKS1A (ENSMAMG00000024163) Carangaria ANCESTRAL SPECIES 2 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Pleuronectoidei ANCESTRAL SPECIES 24 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Turbot MODERN SPECIES 2 ENSSMAG00000007860 ENSSMAG00000006602 ENSSMAG00000006583 ENSSMAG00000006514 ENSSMAG00000006497 ENSSMAG00000006483 UBA3 (ENSSMAG00000006421) #8 ARL6IP5 (ENSSMAG00000006402) #9 LMOD3 (ENSSMAG00000006385) #10 FRMD4B (ENSSMAG00000006293) #11 MITF (ENSSMAG00000006262) #12 ENSSMAG00000026540 ENSSMAG00000027760 ENSSMAG00000006151 EIF4E3 (ENSSMAG00000006106) #15 ENSSMAG00000006095 #22 ENSSMAG00000006006 ENSSMAG00000005987 ENSSMAG00000005957 ENSSMAG00000005944 ENSSMAG00000005929 ENSSMAG00000005664 ENSSMAG00000005616 ENSSMAG00000026827 ENSSMAG00000029604 ENSSMAG00000005545 ENSSMAG00000005530 SCUBE3 (ENSSMAG00000005434) ENSSMAG00000005398 ANKS1A (ENSSMAG00000005327) TAF11 (ENSSMAG00000005281) Tongue sole MODERN SPECIES 1 ENSCSEG00000018772 ENSCSEG00000018719 NFASC (ENSCSEG00000018651) ENSCSEG00000018645 slc16a7 (ENSCSEG00000018632) ENSCSEG00000018627 TAFA3 (ENSCSEG00000018619) UBA3 (ENSCSEG00000018598) #8 LMOD3 (ENSCSEG00000018592) #10 arl6ip5b (ENSCSEG00000018585) #9 FRMD4B (ENSCSEG00000018511) #11 mitfb (ENSCSEG00000018476) #12 ENSCSEG00000018463 eif4e3 (ENSCSEG00000018457) #15 guca1b (ENSCSEG00000018453) ENSCSEG00000018435 #22 SYT2 (ENSCSEG00000018415) ENSCSEG00000018403 ENSCSEG00000017902 ENSCSEG00000017881 hmga1a (ENSCSEG00000017875) SMIM29 (ENSCSEG00000017870) pacsin1a (ENSCSEG00000017855) SPDEF (ENSCSEG00000017844) ilrun (ENSCSEG00000017831) ENSCSEG00000017811 taf11 (ENSCSEG00000017802) ANKS1A (ENSCSEG00000017717) ENSCSEG00000017696 scube3 (ENSCSEG00000017662) ENSCSEG00000017618 Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Seriola ANCESTRAL SPECIES 8 ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b.a.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT01020000230354.A.a.b #11 ENSGT00940000156326.a.a #12 ENSGT00940000167980 ENSGT00940000155865.c.a #15 ENSGT00940000162859.p #22 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806.c.a Greater amberjack MODERN SPECIES 228 ENSSDUG00000021165 NFASC (ENSSDUG00000020626) ENSSDUG00000020578 ENSSDUG00000020569 ENSSDUG00000020522 ENSSDUG00000020509 ENSSDUG00000020505 UBA3 (ENSSDUG00000020453) #8 arl6ip5b (ENSSDUG00000020430) #9 LMOD3 (ENSSDUG00000020413) #10 FRMD4B (ENSSDUG00000020391) #11 MITF (ENSSDUG00000020369) #12 ENSSDUG00000020344 eif4e3 (ENSSDUG00000020316) #15 ENSSDUG00000020303 #22 guca1b (ENSSDUG00000020255) oard1 (ENSSDUG00000020232) ENSSDUG00000020215 SYT2 (ENSSDUG00000020202) ENSSDUG00000020179 ENSSDUG00000020170 ENSSDUG00000020145 ENSSDUG00000020135 ENSSDUG00000020108 ENSSDUG00000020073 ENSSDUG00000019643 GRM4 (ENSSDUG00000019602) hmga1a (ENSSDUG00000019583) SMIM29 (ENSSDUG00000019574) pacsin1a (ENSSDUG00000019543) Yellowtail amberjack MODERN SPECIES 2725 ENSSLDG00000007111 NFASC (ENSSLDG00000007164) ENSSLDG00000007205 ENSSLDG00000007223 slc16a7 (ENSSLDG00000007238) TAFA1 (ENSSLDG00000007256) ENSSLDG00000007275 UBA3 (ENSSLDG00000007295) #8 arl6ip5b (ENSSLDG00000007348) #9 LMOD3 (ENSSLDG00000007374) #10 FRMD4B (ENSSLDG00000007437) #11 mitfb (ENSSLDG00000007666) #12 ENSSLDG00000007698 eif4e3 (ENSSLDG00000007755) #15 ENSSLDG00000007800 #22 guca1b (ENSSLDG00000007830) oard1 (ENSSLDG00000007846) ENSSLDG00000007868 ENSSLDG00000007886 ENSSLDG00000007911 ENSSLDG00000007924 GRM4 (ENSSLDG00000007949) hmga1a (ENSSLDG00000007999) SMIM29 (ENSSLDG00000008016) ENSSLDG00000008031 pacsin1a (ENSSLDG00000008056) SPDEF (ENSSLDG00000008101) ilrun (ENSSLDG00000008116) BLTP3A (ENSSLDG00000008151) taf11 (ENSSLDG00000008190) Barramundi perch MODERN SPECIES 53 pm20d1.2 (ENSLCAG00010012077) NFASC (ENSLCAG00010011255) ENSLCAG00010011158 ENSLCAG00010011157 slc16a7 (ENSLCAG00010011153) TAFA1 (ENSLCAG00010011151) ENSLCAG00010011149 UBA3 (ENSLCAG00010011079) #8 arl6ip5b (ENSLCAG00010011060) #9 LMOD3 (ENSLCAG00010011056) #10 ENSLCAG00010011054 #10 FRMD4B (ENSLCAG00010010999) #11 mitfb (ENSLCAG00010010894) #12 ENSLCAG00010010882 eif4e3 (ENSLCAG00010010884) #15 ppp4r2a (ENSLCAG00010010880) #22 guca1b (ENSLCAG00010010874) oard1 (ENSLCAG00010010869) SYT2 (ENSLCAG00010010866) ENSLCAG00010010863 ENSLCAG00010010857 ENSLCAG00010010848 GRM4 (ENSLCAG00010010829) ENSLCAG00010010822 SMIM29 (ENSLCAG00010010818) pacsin1a (ENSLCAG00010010814) SPDEF (ENSLCAG00010010811) ilrun (ENSLCAG00010010808) BLTP3A (ENSLCAG00010010801) taf11 (ENSLCAG00010010799) ANKS1A (ENSLCAG00010010775) Tiger tail seahorse MODERN SPECIES 148 ENSHCOG00000012801 ENSHCOG00000012775 CLDN10 (ENSHCOG00000012726) ENSHCOG00000000368 cldn10a (ENSHCOG00000012683) abcc4 (ENSHCOG00000012665) ENSHCOG00000000362 ENSHCOG00000012512 UBA3 (ENSHCOG00000012495) #8 arl6ip5b (ENSHCOG00000012448) #9 LMOD3 (ENSHCOG00000012433) #10 FRMD4B (ENSHCOG00000012364) #11 mitfb (ENSHCOG00000012288) #12 ENSHCOG00000012215 eif4e3 (ENSHCOG00000012145) #15 ENSHCOG00000012036 #22 oard1 (ENSHCOG00000012007) guca1b (ENSHCOG00000011987) ENSHCOG00000011960 SYT2 (ENSHCOG00000011953) ENSHCOG00000011932 ENSHCOG00000011915 ENSHCOG00000011907 GGT7 (ENSHCOG00000011895) NCOA6 (ENSHCOG00000011854) plcg1 (ENSHCOG00000011833) zhx3b (ENSHCOG00000011729) rab5if (ENSHCOG00000011725) dhx35 (ENSHCOG00000011691) mafba (ENSHCOG00000011652) rnf114 (ENSHCOG00000011643) Pinecone sodierfish MODERN SPECIES 21 ENSMMDG00005018947 ENSMMDG00005018457 ENSMMDG00005017989 NFASC (ENSMMDG00005017792) ENSMMDG00005017781 slc16a7 (ENSMMDG00005017707) ENSMMDG00005017705 ENSMMDG00005017702 UBA3 (ENSMMDG00005017099) #8 arl6ip5b (ENSMMDG00005017082) #9 LMOD3 (ENSMMDG00005017081) #10 FRMD4B (ENSMMDG00005017076) #11 mitfb (ENSMMDG00005016805) #12 ENSMMDG00005016802 eif4e3 (ENSMMDG00005016796) #15 ENSMMDG00005016793 #22 guca1b (ENSMMDG00005016790) oard1 (ENSMMDG00005016788) SYT2 (ENSMMDG00005016786) ENSMMDG00005016784 ENSMMDG00005016777 GRM4 (ENSMMDG00005016739) ENSMMDG00005016728 SMIM29 (ENSMMDG00005016725) pacsin1a (ENSMMDG00005016719) SPDEF (ENSMMDG00005016706) ilrun (ENSMMDG00005016703) BLTP3A (ENSMMDG00005016702) taf11 (ENSMMDG00005016698) ANKS1A (ENSMMDG00005016664) ENSMMDG00005016655 Cod MODERN SPECIES ENSGMOG00000010338 ENSGMOG00000029644 ENSGMOG00000010329 ENSGMOG00000010281 ENSGMOG00000025024 ENSGMOG00000010260 ENSGMOG00000010255 UBA3 (ENSGMOG00000010238) #8 ARL6IP5 (ENSGMOG00000010233) #9 LMOD3 (ENSGMOG00000028614) #10 FRMD4B (ENSGMOG00000010202) #11 ENSGMOG00000033892 MITF (ENSGMOG00000010175) #12 ENSGMOG00000010153 EIF4E3 (ENSGMOG00000010140) #15 ENSGMOG00000010131 #22 ENSGMOG00000010119 ENSGMOG00000010113 ENSGMOG00000015030 ENSGMOG00000036092 ENSGMOG00000010089 ENSGMOG00000010082 ENSGMOG00000010065 hmga1a (ENSGMOG00000024668) ENSGMOG00000026218 pacsin1a (ENSGMOG00000010048) SPDEF (ENSGMOG00000023283) ILRUN (ENSGMOG00000010041) BLTP3A (ENSGMOG00000010011) TAF11 (ENSGMOG00000010004) ANKS1A (ENSGMOG00000009954) Osteoglossiformes ANCESTRAL SPECIES 28 ENSGT00940000157279.j ENSGT00510000046608.B.t ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT00940000155820.b ENSGT00940000164303.b.b ENSGT00940000162607.a ENSGT00940000155644.b ENSGT00550000074831.l #8 ENSGT00390000008631.a.o.b #9 ENSGT00940000159731 #10 ENSGT00940000156326.b #12 ENSGT00940000165920.a ENSGT00940000155865.c.a #15 ENSGT00390000013995.b.a.a #19 ENSGT00940000162859.p #22 ENSGT00940000155198.A.b ##30 ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000160361 ENSGT00940000156091.a ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000155448.c.b ENSGT00530000063759.b ENSGT00940000165527 ENSGT00390000018558 ENSGT00940000157562.q.b ENSGT00940000154543.c Asian bonytongue MODERN SPECIES 11 prickle2a (ENSSFOG00015029054) MAGI1 (ENSSFOG00015020854) ENSSFOG00015028939 kbtbd8 (ENSSFOG00015026870) slc16a7 (ENSSFOG00015020802) TAFA1 (ENSSFOG00015020770) tafa4b (ENSSFOG00015020753) UBA3 (ENSSFOG00015020666) #8 arl6ip5b (ENSSFOG00015026174) #9 LMOD3 (ENSSFOG00015020628) #10 ENSSFOG00015028695 MITF (ENSSFOG00015026327) #12 ENSSFOG00015020554 eif4e3 (ENSSFOG00015029780) #15 rybpb (ENSSFOG00015025246) #19 ppp4r2a (ENSSFOG00015020511) #22 PDZRN3 (ENSSFOG00015024646) #23 CNTN4 (ENSSFOG00015020161) ##30 ENSSFOG00015019983 ENSSFOG00015019933 ENSSFOG00015019810 ENSSFOG00015019760 sgk2a (ENSSFOG00015019734) L3MBTL1 (ENSSFOG00015019701) srsf6a (ENSSFOG00015019681) snx21 (ENSSFOG00015025990) ENSSFOG00015033018 tekt4 (ENSSFOG00015019634) ENSSFOG00015019623 ENSSFOG00015019494 TSC2 (ENSSFOG00015019126) P. kingsleyae MODERN SPECIES 90 PSMD6 (ENSPKIG00000024819) ENSPKIG00000024813 PRICKLE2 (ENSPKIG00000024795) ENSPKIG00000024778 MAGI1 (ENSPKIG00000024736) slc16a7 (ENSPKIG00000024707) TAFA1 (ENSPKIG00000024695) UBA3 (ENSPKIG00000024656) #8 arl6ip5b (ENSPKIG00000024630) #9 LMOD3 (ENSPKIG00000024622) #10 MITF (ENSPKIG00000024589) #12 ENSPKIG00000024569 foxp1a (ENSPKIG00000024561) eif4e3 (ENSPKIG00000024547) #15 RYBP (ENSPKIG00000024534) #19 ppp4r2a (ENSPKIG00000024507) #22 ENSPKIG00000024491 ENSPKIG00000024481 gdi1 (ENSPKIG00000024468) atp6ap1a (ENSPKIG00000024454) rpl10 (ENSPKIG00000024440) ENSPKIG00000024429 ENSPKIG00000024420 ENSPKIG00000024408 ENSPKIG00000024388 atp2b3a (ENSPKIG00000024312) dedd (ENSPKIG00000024245) si:ch211-229n2.6 (ENSPKIG00000024225) B4GALT3 (ENSPKIG00000024219) bgna (ENSPKIG00000024209) si:dkey-6n6.1 (ENSPKIG00000024196) Spotted gar MODERN SPECIES 671 arl6ip5b (ENSLOCG00000010101) #9 LMOD3 (ENSLOCG00000010083) #10 FRMD4B (ENSLOCG00000010065) #11 mitfb (ENSLOCG00000010058) #12 ENSLOCG00000010050 zgc:113054 (ENSLOCG00000010041) mdfic2 (ENSLOCG00000010038) #13 foxp1b (ENSLOCG00000010009) eif4e3 (ENSLOCG00000010001) #15 gpr27 (ENSLOCG00000018245) #16 prok2 (ENSLOCG00000009991) ENSLOCG00000018244 rybpa (ENSLOCG00000009980) #19 shq1 (ENSLOCG00000009970) #20 gxylt2 (ENSLOCG00000009958) #21 ppp4r2b (ENSLOCG00000009942) #22 ENSLOCG00000009926 pdzrn3b (ENSLOCG00000009917) #23 ENSLOCG00000009897 ##30 ENSLOCG00000009860 ENSLOCG00000009835 ##30 cntn4 (ENSLOCG00000009813) thumpd3 (ENSLOCG00000009800) SRGAP3 (ENSLOCG00000009772) prdx3 (ENSLOCG00000009763) sfxn4 (ENSLOCG00000009759) dennd10 (ENSLOCG00000009752) eif3s10 (ENSLOCG00000009729) NANOS1 (ENSLOCG00000018243) CACUL1 (ENSLOCG00000009720) PRLHR (ENSLOCG00000018242) Reedfish MODERN SPECIES 9 nol8 (ENSECRG00000018962) ogna (ENSECRG00000018922) OMD (ENSECRG00000018893) aspn (ENSECRG00000018729) ECM2 (ENSECRG00000018646) ENSECRG00000018618 ippk (ENSECRG00000018588) ENSECRG00000018550 ENSECRG00000018531 ENSECRG00000018520 alas1 (ENSECRG00000018474) ENSECRG00000018438 ENSECRG00000018394 #14 mdfic2 (ENSECRG00000018371) #13 eif4e3 (ENSECRG00000018352) #15 ppp4r2b (ENSECRG00000018321) #22 gxylt2 (ENSECRG00000018302) #21 SHQ1 (ENSECRG00000018270) #20 ENSECRG00000018232 rasgrp4 (ENSECRG00000018161) ENSECRG00000018115 ENSECRG00000018100 psmd8 (ENSECRG00000018068) ENSECRG00000018035 chp2 (ENSECRG00000018010) ENSECRG00000017993 rnaset2l (ENSECRG00000017970) ENSECRG00000017941 zgc:113149 (ENSECRG00000017927) zgc:101731 (ENSECRG00000022788) capns1b (ENSECRG00000022783)