Murinae	ANCESTRAL SPECIES		ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus	ANCESTRAL SPECIES		ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.a.a ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b	ENSGT00940000160310
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.a.a ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b	ENSGT00940000160310
Steppe mouse	MODERN SPECIES	2692					ENSMSIG00000020382 #11	Plaat5 (ENSMSIG00000020351) #12	Lgals12 (ENSMSIG00000020293) #13	Plaat3 (ENSMSIG00000020245) #14	Atl3 (ENSMSIG00000020181) #15	Rtn3 (ENSMSIG00000020070) #16	Zfta (ENSMSIG00000020051) #17	Spindoc (ENSMSIG00000020022) #18	Mark2 (ENSMSIG00000019791) #19	ENSMSIG00000019781 #20	Rcor2 (ENSMSIG00000019762) #21	Naa40 (ENSMSIG00000019717) #22	Cox8a (ENSMSIG00000019707) #23	Otub1 (ENSMSIG00000019681) #24	Flrt1 (ENSMSIG00000019670) #25	Macrod1 (ENSMSIG00000019622) #26	Stip1 (ENSMSIG00000019592) #27	Fermt3 (ENSMSIG00000019566) #28	Nudt22 (ENSMSIG00000019552) #29	ENSMSIG00000019513 #30	Dnajc4 (ENSMSIG00000019476) #31	ENSMSIG00000019463 #32
spretus	MODERN SPECIES	10	Slc3a2 (MGP_SPRETEiJ_G0023560)	Chrm1 (MGP_SPRETEiJ_G0023559)	Slc22a6 (MGP_SPRETEiJ_G0023558)	Slc22a8 (MGP_SPRETEiJ_G0023557)	MGP_SPRETEiJ_G0023555 ##11	Slc22a19 (MGP_SPRETEiJ_G0023554) #11	MGP_SPRETEiJ_G0023553 #12	Lgals12 (MGP_SPRETEiJ_G0023552) #13	Plaat3 (MGP_SPRETEiJ_G0023551) #14	Atl3 (MGP_SPRETEiJ_G0023550) #15	Rtn3 (MGP_SPRETEiJ_G0023549) #16	Zfta (MGP_SPRETEiJ_G0023548) #17	Spindoc (MGP_SPRETEiJ_G0023547) #18	Mark2 (MGP_SPRETEiJ_G0023546) #19	Rcor2 (MGP_SPRETEiJ_G0023545) #21	Naa40 (MGP_SPRETEiJ_G0023544) #22	Cox8a (MGP_SPRETEiJ_G0023543) #23	Otub1 (MGP_SPRETEiJ_G0023542) #24	Flrt1 (MGP_SPRETEiJ_G0023541) #25	Macrod1 (MGP_SPRETEiJ_G0023540) #26	Stip1 (MGP_SPRETEiJ_G0023539) #27	Fermt3 (MGP_SPRETEiJ_G0023538) #28	Trpt1 (MGP_SPRETEiJ_G0023537) #30	Nudt22 (MGP_SPRETEiJ_G0023536) #29	Dnajc4 (MGP_SPRETEiJ_G0023535) #31	Vegfb (MGP_SPRETEiJ_G0023534) #32	MGP_SPRETEiJ_G0023533	Plcb3 (MGP_SPRETEiJ_G0023532)	Bad (MGP_SPRETEiJ_G0023531)	Gpr137 (MGP_SPRETEiJ_G0023530)	Kcnk4 (MGP_SPRETEiJ_G0023529)
Mouse	MODERN SPECIES	10	Slc22a30 (ENSMUSG00000052562) ##11	Slc22a29 (ENSMUSG00000075044) ##11	Slc22a28 (ENSMUSG00000063590) ##11	Slc22a27 (ENSMUSG00000067656) ##11	Slc22a26 (ENSMUSG00000053303) ##11	Slc22a19 (ENSMUSG00000024757) #11	Plaat5 (ENSMUSG00000024973) #12	Lgals12 (ENSMUSG00000024972) #13	Plaat3 (ENSMUSG00000060675) #14	Atl3 (ENSMUSG00000024759) #15	Rtn3 (ENSMUSG00000024758) #16	Zfta (ENSMUSG00000053080) #17	Spindoc (ENSMUSG00000024970) #18	Mark2 (ENSMUSG00000024969) #19	Rcor2 (ENSMUSG00000024968) #21	Naa40 (ENSMUSG00000024764) #22	Cox8a (ENSMUSG00000035885) #23	Otub1 (ENSMUSG00000024767) #24	Flrt1 (ENSMUSG00000047787) #25	Macrod1 (ENSMUSG00000036278) #26	Stip1 (ENSMUSG00000024966) #27	Fermt3 (ENSMUSG00000024965) #28	Trpt1 (ENSMUSG00000047656) #30	Nudt22 (ENSMUSG00000037349) #29	Dnajc4 (ENSMUSG00000024963) #31	Vegfb (ENSMUSG00000024962) #32	Fkbp2 (ENSMUSG00000056629)	Ppp1r14b (ENSMUSG00000056612)	Plcb3 (ENSMUSG00000024960)	Bad (ENSMUSG00000024959)	Gpr137 (ENSMUSG00000024958)
Ryukyu mouse	MODERN SPECIES	10	Tex54 (MGP_CAROLIEiJ_G0022649)	Wdr74 (MGP_CAROLIEiJ_G0022648)	Slc3a2 (MGP_CAROLIEiJ_G0022647)	Chrm1 (MGP_CAROLIEiJ_G0022646)	Slc22a6 (MGP_CAROLIEiJ_G0022645)	Slc22a8 (MGP_CAROLIEiJ_G0022644)	MGP_CAROLIEiJ_G0022643 #12	Lgals12 (MGP_CAROLIEiJ_G0022642) #13	Plaat3 (MGP_CAROLIEiJ_G0022641) #14	Atl3 (MGP_CAROLIEiJ_G0022640) #15	Rtn3 (MGP_CAROLIEiJ_G0022639) #16	Zfta (MGP_CAROLIEiJ_G0022638) #17	Spindoc (MGP_CAROLIEiJ_G0022637) #18	Mark2 (MGP_CAROLIEiJ_G0022636) #19	Rcor2 (MGP_CAROLIEiJ_G0022635) #21	Naa40 (MGP_CAROLIEiJ_G0022634) #22	Cox8a (MGP_CAROLIEiJ_G0022633) #23	MGP_CAROLIEiJ_G0022632 #24	Flrt1 (MGP_CAROLIEiJ_G0022631) #25	Macrod1 (MGP_CAROLIEiJ_G0022630) #26	Stip1 (MGP_CAROLIEiJ_G0022629) #27	Fermt3 (MGP_CAROLIEiJ_G0022628) #28	Trpt1 (MGP_CAROLIEiJ_G0022627) #30	Nudt22 (MGP_CAROLIEiJ_G0022626) #29	Dnajc4 (MGP_CAROLIEiJ_G0022625) #31	Vegfb (MGP_CAROLIEiJ_G0022624) #32	MGP_CAROLIEiJ_G0022623	MGP_CAROLIEiJ_G0022622	Plcb3 (MGP_CAROLIEiJ_G0022621)	Bad (MGP_CAROLIEiJ_G0022620)	Gpr137 (MGP_CAROLIEiJ_G0022619)
Shrew mouse	MODERN SPECIES		Wdr74 (MGP_PahariEiJ_G0014143)	Slc3a2 (MGP_PahariEiJ_G0014142)	Chrm1 (MGP_PahariEiJ_G0014141)	Slc22a6 (MGP_PahariEiJ_G0014140)	Slc22a8 (MGP_PahariEiJ_G0014139)	MGP_PahariEiJ_G0014138 ##11	MGP_PahariEiJ_G0014137 #12	Lgals12 (MGP_PahariEiJ_G0014136) #13	Plaat3 (MGP_PahariEiJ_G0014135) #14	Atl3 (MGP_PahariEiJ_G0014134) #15	Rtn3 (MGP_PahariEiJ_G0014133) #16	Zfta (MGP_PahariEiJ_G0014132) #17	Spindoc (MGP_PahariEiJ_G0014131) #18	Mark2 (MGP_PahariEiJ_G0014130) #19	Rcor2 (MGP_PahariEiJ_G0014129) #21	Naa40 (MGP_PahariEiJ_G0014128) #22	Cox8a (MGP_PahariEiJ_G0014127) #23	Otub1 (MGP_PahariEiJ_G0014126) #24	Flrt1 (MGP_PahariEiJ_G0014125) #25	Macrod1 (MGP_PahariEiJ_G0014124) #26	Stip1 (MGP_PahariEiJ_G0014123) #27	Fermt3 (MGP_PahariEiJ_G0014122) #28	Trpt1 (MGP_PahariEiJ_G0014121) #30	Nudt22 (MGP_PahariEiJ_G0014120) #29	Dnajc4 (MGP_PahariEiJ_G0014119) #31	Vegfb (MGP_PahariEiJ_G0014118) #32	MGP_PahariEiJ_G0014117	MGP_PahariEiJ_G0014116	Plcb3 (MGP_PahariEiJ_G0014115)	Bad (MGP_PahariEiJ_G0014114)	Gpr137 (MGP_PahariEiJ_G0014113)
Rat	MODERN SPECIES		Ust5r (ENSRNOG00000061890) ##11	UST4r (ENSRNOG00000049826) ##11	Dnajb6-ps10 (ENSRNOG00000017884)	Slc22a24 (ENSRNOG00000056396) #11	Plaat5 (ENSRNOG00000023528) #12	Lgals12 (ENSRNOG00000021207) #13	Plaat3 (ENSRNOG00000021206) #14	ENSRNOG00000066743	Atl3 (ENSRNOG00000021203) #15	Rtn3 (ENSRNOG00000021202) #16	Zfta (ENSRNOG00000032042) #17	Spindoc (ENSRNOG00000025061) #18	Mark2 (ENSRNOG00000021184) #19	Rcor2 (ENSRNOG00000060849) #21	Hnrnpr-ps2 (ENSRNOG00000048337)	Naa40 (ENSRNOG00000021179) #22	Otub1 (ENSRNOG00000021175) #24	Flrt1 (ENSRNOG00000022428) #25	Macrod1 (ENSRNOG00000021174) #26	Fermt3 (ENSRNOG00000021161) #28	Trpt1 (ENSRNOG00000023023) #30	Nudt22 (ENSRNOG00000021158) #29	Stip1 (ENSRNOG00000021164) #27	Dnajc4 (ENSRNOG00000043060) #31	Vegfb (ENSRNOG00000021156) #32	Fkbp2 (ENSRNOG00000021153)	Ppp1r14b (ENSRNOG00000021151)	Plcb3 (ENSRNOG00000021150)	Bad (ENSRNOG00000021147)	Gpr137 (ENSRNOG00000021145)	Kcnk4 (ENSRNOG00000021140)