Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.a.a ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Murinae	ANCESTRAL SPECIES		ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus	ANCESTRAL SPECIES		ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.a.a ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b	ENSGT00940000160310
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.a.a ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b	ENSGT00940000160310
Steppe mouse	MODERN SPECIES	2692					ENSMSIG00000020382 #11	Plaat5 (ENSMSIG00000020351) #12	Lgals12 (ENSMSIG00000020293) #13	Plaat3 (ENSMSIG00000020245) #14	Atl3 (ENSMSIG00000020181) #15	Rtn3 (ENSMSIG00000020070) #16	Zfta (ENSMSIG00000020051) #17	Spindoc (ENSMSIG00000020022) #18	Mark2 (ENSMSIG00000019791) #19	ENSMSIG00000019781 #20	Rcor2 (ENSMSIG00000019762) #21	Naa40 (ENSMSIG00000019717) #22	Cox8a (ENSMSIG00000019707) #23	Otub1 (ENSMSIG00000019681) #24	Flrt1 (ENSMSIG00000019670) #25	Macrod1 (ENSMSIG00000019622) #26	Stip1 (ENSMSIG00000019592) #27	Fermt3 (ENSMSIG00000019566) #28	Nudt22 (ENSMSIG00000019552) #29	ENSMSIG00000019513 #30	Dnajc4 (ENSMSIG00000019476) #31	ENSMSIG00000019463 #32
spretus	MODERN SPECIES	10	Slc3a2 (MGP_SPRETEiJ_G0023560)	Chrm1 (MGP_SPRETEiJ_G0023559)	Slc22a6 (MGP_SPRETEiJ_G0023558)	Slc22a8 (MGP_SPRETEiJ_G0023557)	MGP_SPRETEiJ_G0023555 ##11	Slc22a19 (MGP_SPRETEiJ_G0023554) #11	MGP_SPRETEiJ_G0023553 #12	Lgals12 (MGP_SPRETEiJ_G0023552) #13	Plaat3 (MGP_SPRETEiJ_G0023551) #14	Atl3 (MGP_SPRETEiJ_G0023550) #15	Rtn3 (MGP_SPRETEiJ_G0023549) #16	Zfta (MGP_SPRETEiJ_G0023548) #17	Spindoc (MGP_SPRETEiJ_G0023547) #18	Mark2 (MGP_SPRETEiJ_G0023546) #19	Rcor2 (MGP_SPRETEiJ_G0023545) #21	Naa40 (MGP_SPRETEiJ_G0023544) #22	Cox8a (MGP_SPRETEiJ_G0023543) #23	Otub1 (MGP_SPRETEiJ_G0023542) #24	Flrt1 (MGP_SPRETEiJ_G0023541) #25	Macrod1 (MGP_SPRETEiJ_G0023540) #26	Stip1 (MGP_SPRETEiJ_G0023539) #27	Fermt3 (MGP_SPRETEiJ_G0023538) #28	Trpt1 (MGP_SPRETEiJ_G0023537) #30	Nudt22 (MGP_SPRETEiJ_G0023536) #29	Dnajc4 (MGP_SPRETEiJ_G0023535) #31	Vegfb (MGP_SPRETEiJ_G0023534) #32	MGP_SPRETEiJ_G0023533	Plcb3 (MGP_SPRETEiJ_G0023532)	Bad (MGP_SPRETEiJ_G0023531)	Gpr137 (MGP_SPRETEiJ_G0023530)	Kcnk4 (MGP_SPRETEiJ_G0023529)
Mouse	MODERN SPECIES	10	Slc22a30 (ENSMUSG00000052562) ##11	Slc22a29 (ENSMUSG00000075044) ##11	Slc22a28 (ENSMUSG00000063590) ##11	Slc22a27 (ENSMUSG00000067656) ##11	Slc22a26 (ENSMUSG00000053303) ##11	Slc22a19 (ENSMUSG00000024757) #11	Plaat5 (ENSMUSG00000024973) #12	Lgals12 (ENSMUSG00000024972) #13	Plaat3 (ENSMUSG00000060675) #14	Atl3 (ENSMUSG00000024759) #15	Rtn3 (ENSMUSG00000024758) #16	Zfta (ENSMUSG00000053080) #17	Spindoc (ENSMUSG00000024970) #18	Mark2 (ENSMUSG00000024969) #19	Rcor2 (ENSMUSG00000024968) #21	Naa40 (ENSMUSG00000024764) #22	Cox8a (ENSMUSG00000035885) #23	Otub1 (ENSMUSG00000024767) #24	Flrt1 (ENSMUSG00000047787) #25	Macrod1 (ENSMUSG00000036278) #26	Stip1 (ENSMUSG00000024966) #27	Fermt3 (ENSMUSG00000024965) #28	Trpt1 (ENSMUSG00000047656) #30	Nudt22 (ENSMUSG00000037349) #29	Dnajc4 (ENSMUSG00000024963) #31	Vegfb (ENSMUSG00000024962) #32	Fkbp2 (ENSMUSG00000056629)	Ppp1r14b (ENSMUSG00000056612)	Plcb3 (ENSMUSG00000024960)	Bad (ENSMUSG00000024959)	Gpr137 (ENSMUSG00000024958)
Ryukyu mouse	MODERN SPECIES	10	Tex54 (MGP_CAROLIEiJ_G0022649)	Wdr74 (MGP_CAROLIEiJ_G0022648)	Slc3a2 (MGP_CAROLIEiJ_G0022647)	Chrm1 (MGP_CAROLIEiJ_G0022646)	Slc22a6 (MGP_CAROLIEiJ_G0022645)	Slc22a8 (MGP_CAROLIEiJ_G0022644)	MGP_CAROLIEiJ_G0022643 #12	Lgals12 (MGP_CAROLIEiJ_G0022642) #13	Plaat3 (MGP_CAROLIEiJ_G0022641) #14	Atl3 (MGP_CAROLIEiJ_G0022640) #15	Rtn3 (MGP_CAROLIEiJ_G0022639) #16	Zfta (MGP_CAROLIEiJ_G0022638) #17	Spindoc (MGP_CAROLIEiJ_G0022637) #18	Mark2 (MGP_CAROLIEiJ_G0022636) #19	Rcor2 (MGP_CAROLIEiJ_G0022635) #21	Naa40 (MGP_CAROLIEiJ_G0022634) #22	Cox8a (MGP_CAROLIEiJ_G0022633) #23	MGP_CAROLIEiJ_G0022632 #24	Flrt1 (MGP_CAROLIEiJ_G0022631) #25	Macrod1 (MGP_CAROLIEiJ_G0022630) #26	Stip1 (MGP_CAROLIEiJ_G0022629) #27	Fermt3 (MGP_CAROLIEiJ_G0022628) #28	Trpt1 (MGP_CAROLIEiJ_G0022627) #30	Nudt22 (MGP_CAROLIEiJ_G0022626) #29	Dnajc4 (MGP_CAROLIEiJ_G0022625) #31	Vegfb (MGP_CAROLIEiJ_G0022624) #32	MGP_CAROLIEiJ_G0022623	MGP_CAROLIEiJ_G0022622	Plcb3 (MGP_CAROLIEiJ_G0022621)	Bad (MGP_CAROLIEiJ_G0022620)	Gpr137 (MGP_CAROLIEiJ_G0022619)
Shrew mouse	MODERN SPECIES		Wdr74 (MGP_PahariEiJ_G0014143)	Slc3a2 (MGP_PahariEiJ_G0014142)	Chrm1 (MGP_PahariEiJ_G0014141)	Slc22a6 (MGP_PahariEiJ_G0014140)	Slc22a8 (MGP_PahariEiJ_G0014139)	MGP_PahariEiJ_G0014138 ##11	MGP_PahariEiJ_G0014137 #12	Lgals12 (MGP_PahariEiJ_G0014136) #13	Plaat3 (MGP_PahariEiJ_G0014135) #14	Atl3 (MGP_PahariEiJ_G0014134) #15	Rtn3 (MGP_PahariEiJ_G0014133) #16	Zfta (MGP_PahariEiJ_G0014132) #17	Spindoc (MGP_PahariEiJ_G0014131) #18	Mark2 (MGP_PahariEiJ_G0014130) #19	Rcor2 (MGP_PahariEiJ_G0014129) #21	Naa40 (MGP_PahariEiJ_G0014128) #22	Cox8a (MGP_PahariEiJ_G0014127) #23	Otub1 (MGP_PahariEiJ_G0014126) #24	Flrt1 (MGP_PahariEiJ_G0014125) #25	Macrod1 (MGP_PahariEiJ_G0014124) #26	Stip1 (MGP_PahariEiJ_G0014123) #27	Fermt3 (MGP_PahariEiJ_G0014122) #28	Trpt1 (MGP_PahariEiJ_G0014121) #30	Nudt22 (MGP_PahariEiJ_G0014120) #29	Dnajc4 (MGP_PahariEiJ_G0014119) #31	Vegfb (MGP_PahariEiJ_G0014118) #32	MGP_PahariEiJ_G0014117	MGP_PahariEiJ_G0014116	Plcb3 (MGP_PahariEiJ_G0014115)	Bad (MGP_PahariEiJ_G0014114)	Gpr137 (MGP_PahariEiJ_G0014113)
Rat	MODERN SPECIES		Ust5r (ENSRNOG00000061890) ##11	UST4r (ENSRNOG00000049826) ##11	Dnajb6-ps10 (ENSRNOG00000017884)	Slc22a24 (ENSRNOG00000056396) #11	Plaat5 (ENSRNOG00000023528) #12	Lgals12 (ENSRNOG00000021207) #13	Plaat3 (ENSRNOG00000021206) #14	ENSRNOG00000066743	Atl3 (ENSRNOG00000021203) #15	Rtn3 (ENSRNOG00000021202) #16	Zfta (ENSRNOG00000032042) #17	Spindoc (ENSRNOG00000025061) #18	Mark2 (ENSRNOG00000021184) #19	Rcor2 (ENSRNOG00000060849) #21	Hnrnpr-ps2 (ENSRNOG00000048337)	Naa40 (ENSRNOG00000021179) #22	Otub1 (ENSRNOG00000021175) #24	Flrt1 (ENSRNOG00000022428) #25	Macrod1 (ENSRNOG00000021174) #26	Fermt3 (ENSRNOG00000021161) #28	Trpt1 (ENSRNOG00000023023) #30	Nudt22 (ENSRNOG00000021158) #29	Stip1 (ENSRNOG00000021164) #27	Dnajc4 (ENSRNOG00000043060) #31	Vegfb (ENSRNOG00000021156) #32	Fkbp2 (ENSRNOG00000021153)	Ppp1r14b (ENSRNOG00000021151)	Plcb3 (ENSRNOG00000021150)	Bad (ENSRNOG00000021147)	Gpr137 (ENSRNOG00000021145)	Kcnk4 (ENSRNOG00000021140)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000156646.j	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000161450 #26	ENSGT00940000159375 #25	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00940000160539	ENSGT00940000165892	ENSGT00390000010740	ENSGT00940000153986.b.b
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	401	Chrm1 (ENSCGRG00001002011)	Slc22a6 (ENSCGRG00001015989)	Slc22a8 (ENSCGRG00001007311)	ENSCGRG00001003608 ##11	ENSCGRG00001021584	Slc22a19 (ENSCGRG00001022436) #11	Plaat5 (ENSCGRG00001019087) #12	Lgals12 (ENSCGRG00001010564) #13	Plaat3 (ENSCGRG00001007573) #14	Atl3 (ENSCGRG00001018013) #15	Rtn3 (ENSCGRG00001018871) #16	Zfta (ENSCGRG00001004358) #17	Spindoc (ENSCGRG00001001090) #18	Mark2 (ENSCGRG00001010551) #19	Rcor2 (ENSCGRG00001008621) #21	ENSCGRG00001004057 #22	Cox8a (ENSCGRG00001024928) #23	Otub1 (ENSCGRG00001012395) #24	Flrt1 (ENSCGRG00001011678) #25	Macrod1 (ENSCGRG00001022618) #26	Stip1 (ENSCGRG00001018895) #27	Fermt3 (ENSCGRG00001013797) #28	Trpt1 (ENSCGRG00001008474) #30	Nudt22 (ENSCGRG00001001214) #29	Dnajc4 (ENSCGRG00001021692) #31	Vegfb (ENSCGRG00001019009) #32	Ppp1r14b (ENSCGRG00001018612)	ENSCGRG00001017620	Plcb3 (ENSCGRG00001015760)	ENSCGRG00001013654	Gpr137 (ENSCGRG00001001170)
Chinese hamster chok1gshd	MODERN SPECIES	352	Mfsd1 (ENSCGRG00001015422)	ENSCGRG00001016644	Schip1 (ENSCGRG00001023430)	Il12a (ENSCGRG00001009859)	ENSCGRG00001021940	1110032F04Rik (ENSCGRG00001003309)	Ift80 (ENSCGRG00001016127)	Trim59 (ENSCGRG00001007406)	Smc4 (ENSCGRG00001022980)	Kpna4 (ENSCGRG00001015194)	Arl14 (ENSCGRG00001008210)	Ppm1l (ENSCGRG00001010651)	B3galnt1 (ENSCGRG00001003144)	Nmd3 (ENSCGRG00001001792)	Sptssb (ENSCGRG00001004013)	ENSCGRG00001020543 #22	Otol1 (ENSCGRG00001017277)	ENSCGRG00001012875	Sis (ENSCGRG00001014296)	Slitrk3 (ENSCGRG00001005058)	Bche (ENSCGRG00001009291)	ENSCGRG00001005738	Zbbx (ENSCGRG00001001503)	Serpini2 (ENSCGRG00001020126)	Wdr49 (ENSCGRG00001014753)	Pdcd10 (ENSCGRG00001020529)	Serpini1 (ENSCGRG00001014906)	Gm29133 (ENSCGRG00001009542)	Golim4 (ENSCGRG00001019014)	Fstl5 (ENSCGRG00001000201)	Rapgef2 (ENSCGRG00001022433)
Golden Hamster	MODERN SPECIES	617	Slc22a6 (ENSMAUG00000013676)	Slc22a8 (ENSMAUG00000013177)	ENSMAUG00000013367 ##11	Slc22a19 (ENSMAUG00000013315) #11	Plaat5 (ENSMAUG00000013292) #12	Lgals12 (ENSMAUG00000014489) #13	Plaat3 (ENSMAUG00000013633) #14	Atl3 (ENSMAUG00000014736) #15	ENSMAUG00000013612 #16	Zfta (ENSMAUG00000013334) #17	Spindoc (ENSMAUG00000013145) #18	ENSMAUG00000014179 #19	ENSMAUG00000015638	ENSMAUG00000013126 #19	Rcor2 (ENSMAUG00000013529) #21	Naa40 (ENSMAUG00000013206) #22	Cox8a (ENSMAUG00000015109) #23	ENSMAUG00000013281 #24	Macrod1 (ENSMAUG00000013811) #26	Flrt1 (ENSMAUG00000015484) #25	Stip1 (ENSMAUG00000015020) #27	Fermt3 (ENSMAUG00000014915) #28	Trpt1 (ENSMAUG00000014107) #30	Vegfb (ENSMAUG00000013835) #32	ENSMAUG00000013396	Bad (ENSMAUG00000013587)	Gpr137 (ENSMAUG00000013567)	Kcnk4 (ENSMAUG00000013496)	Catsperz (ENSMAUG00000013579)	Esrra (ENSMAUG00000015311)	Trmt112 (ENSMAUG00000013650)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d ##11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000008490 ##11	ENSPEMG00000025227 ##11	ENSPEMG00000017469 ##11	ENSPEMG00000025385 ##11	Slc22a19 (ENSPEMG00000011237) #11	ENSPEMG00000030267 ##11	Plaat5 (ENSPEMG00000007949) #12	Lgals12 (ENSPEMG00000002696) #13	Plaat3 (ENSPEMG00000015751) #14	Atl3 (ENSPEMG00000017714) #15	ENSPEMG00000006921 #16	Zfta (ENSPEMG00000015536) #17	Spindoc (ENSPEMG00000005634) #18	Mark2 (ENSPEMG00000004482) #19	Rcor2 (ENSPEMG00000018762) #21	Naa40 (ENSPEMG00000014476) #22	Cox8a (ENSPEMG00000025233) #23	Otub1 (ENSPEMG00000014074) #24	Flrt1 (ENSPEMG00000017136) #25	Macrod1 (ENSPEMG00000014855) #26	ENSPEMG00000009317	ENSPEMG00000006132 #27	Fermt3 (ENSPEMG00000017447) #28	Trpt1 (ENSPEMG00000013720) #30	Nudt22 (ENSPEMG00000002624) #29	Dnajc4 (ENSPEMG00000018531) #31	Vegfb (ENSPEMG00000012050) #32	ENSPEMG00000018692	Ppp1r14b (ENSPEMG00000015080)	Plcb3 (ENSPEMG00000015923)	Bad (ENSPEMG00000015834)
Prairie vole	MODERN SPECIES	16	Slc22a6 (ENSMOCG00000021104)	Slc22a8 (ENSMOCG00000011371)	ENSMOCG00000002914 ##11	ENSMOCG00000019218 ##11	ENSMOCG00000001921	Slc22a19 (ENSMOCG00000020438) #11	Plaat5 (ENSMOCG00000016896) #12	Lgals12 (ENSMOCG00000019635) #13	Plaat3 (ENSMOCG00000016945) #14	Atl3 (ENSMOCG00000014305) #15	ENSMOCG00000001558 #16	ENSMOCG00000016523 #17	Spindoc (ENSMOCG00000016927) #18	Mark2 (ENSMOCG00000015697) #19	Rcor2 (ENSMOCG00000001766) #21	Naa40 (ENSMOCG00000014326) #22	Cox8a (ENSMOCG00000002916) #23	ENSMOCG00000001410 #24	Flrt1 (ENSMOCG00000013861) #25	Macrod1 (ENSMOCG00000011709) #26	Stip1 (ENSMOCG00000013041) #27	Fermt3 (ENSMOCG00000006698) #28	Trpt1 (ENSMOCG00000021342) #30	Nudt22 (ENSMOCG00000018073) #29	Dnajc4 (ENSMOCG00000016715) #31	Vegfb (ENSMOCG00000021740) #32	ENSMOCG00000019729	Ppp1r14b (ENSMOCG00000017324)	Plcb3 (ENSMOCG00000003068)	Bad (ENSMOCG00000007074)	Gpr137 (ENSMOCG00000012626)
Upper Galilee mountains blind mole rat	MODERN SPECIES	873						Plaat5 (ENSNGAG00000000495) #12	Lgals12 (ENSNGAG00000004004) #13	Plaat3 (ENSNGAG00000018851) #14	Atl3 (ENSNGAG00000009468) #15	ENSNGAG00000005788	ENSNGAG00000000509 #16	Zfta (ENSNGAG00000001076) #17	Spindoc (ENSNGAG00000000047) #18	Mark2 (ENSNGAG00000011826) #19	Rcor2 (ENSNGAG00000010830) #21	Naa40 (ENSNGAG00000016245) #22	ENSNGAG00000015452	ENSNGAG00000010758
Lesser Egyptian jerboa	MODERN SPECIES	60	ENSJJAG00000001125	Chrm1 (ENSJJAG00000013856)	Slc22a6 (ENSJJAG00000009093)	Slc22a8 (ENSJJAG00000023072)	ENSJJAG00000010614 #11	Plaat5 (ENSJJAG00000020253) #12	Lgals12 (ENSJJAG00000014881) #13	Plaat3 (ENSJJAG00000021915) #14	ENSJJAG00000017667	ENSJJAG00000006253 #15	ENSJJAG00000016262 #16	Zfta (ENSJJAG00000019968) #17	Spindoc (ENSJJAG00000014147) #18	Mark2 (ENSJJAG00000018612) #19	Rcor2 (ENSJJAG00000000799) #21	Naa40 (ENSJJAG00000010926) #22	Cox8a (ENSJJAG00000022271) #23	Otub1 (ENSJJAG00000017403) #24	Macrod1 (ENSJJAG00000010697) #26	Flrt1 (ENSJJAG00000010623) #25	ENSJJAG00000009747	Stip1 (ENSJJAG00000011045) #27	Fermt3 (ENSJJAG00000016496) #28	Trpt1 (ENSJJAG00000010855) #30	Nudt22 (ENSJJAG00000021699) #29	Dnajc4 (ENSJJAG00000014463) #31	Vegfb (ENSJJAG00000005482) #32	ENSJJAG00000023732	Plcb3 (ENSJJAG00000022408)	Bad (ENSJJAG00000021934)	Gpr137 (ENSJJAG00000018942)
Kangaroo rat	MODERN SPECIES	373							ENSDORG00000028351 #12	Lgals12 (ENSDORG00000012907) #13	Plaat3 (ENSDORG00000010379) #14	Atl3 (ENSDORG00000010381) #15	ENSDORG00000004345 #16	Zfta (ENSDORG00000025999) #17	Spindoc (ENSDORG00000007875) #18	Mark2 (ENSDORG00000012213) #19	Rcor2 (ENSDORG00000012215) #21	Naa40 (ENSDORG00000011271) #22	Cox8a (ENSDORG00000029070) #23	Otub1 (ENSDORG00000011273) #24	Flrt1 (ENSDORG00000025890) #25	Macrod1 (ENSDORG00000011275) #26	Stip1 (ENSDORG00000001609) #27	Fermt3 (ENSDORG00000001620) #28	Trpt1 (ENSDORG00000001624) #30	Nudt22 (ENSDORG00000001627) #29	Dnajc4 (ENSDORG00000001628) #31	Vegfb (ENSDORG00000001629) #32	ENSDORG00000001630	ENSDORG00000001631	Plcb3 (ENSDORG00000001633)	Bad (ENSDORG00000001637)	Gpr137 (ENSDORG00000001638)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000164763	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878	ENSGT00940000154853.c ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00940000160266	ENSGT00940000161328	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000161450 #26	ENSGT00940000159375 #25	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000044815	ENSHGLG00000012042	ENSHGLG00000045615	FBP1 (ENSHGLG00000050880)	ENSHGLG00000012322	ENSHGLG00000012161	ENSHGLG00000014812	ENSHGLG00000050757 ##14	ENSHGLG00000033662 #14	ENSHGLG00000010138 #15	ENSHGLG00000037041 #16	ZFTA (ENSHGLG00000011849) #17	SPINDOC (ENSHGLG00000034024) #18	ENSHGLG00000011808 #19	RCOR2 (ENSHGLG00000014109) #21	NAA40 (ENSHGLG00000013175) #22	COX8A (ENSHGLG00000012316) #23	ENSHGLG00000011812 #24	MACROD1 (ENSHGLG00000018799) #26	FLRT1 (ENSHGLG00000045678) #25	STIP1 (ENSHGLG00000016796) #27	TRPT1 (ENSHGLG00000013748) #30	NUDT22 (ENSHGLG00000012442) #29	DNAJC4 (ENSHGLG00000010363) #31	ENSHGLG00000013921 #32	FKBP2 (ENSHGLG00000037212)	PPP1R14B (ENSHGLG00000041422)	BAD (ENSHGLG00000013154)	GPR137 (ENSHGLG00000010359)	KCNK4 (ENSHGLG00000012923)	ENSHGLG00000044117
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00940000160266	ENSGT00940000161328	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00940000161328	ENSGT00940000163752	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Long-tailed chinchilla	MODERN SPECIES	129	ERCC6L2 (ENSCLAG00000016395)	PTCH1 (ENSCLAG00000016919)	FANCC (ENSCLAG00000016996)	ENSCLAG00000017128	ENSCLAG00000016743	FBP1 (ENSCLAG00000017181)	FBP2 (ENSCLAG00000016623)	PLAAT2 (ENSCLAG00000016552) ##14	PLAAT3 (ENSCLAG00000017157) #14	ATL3 (ENSCLAG00000016950) #15	ENSCLAG00000016800 #16	ZFTA (ENSCLAG00000016548) #17	SPINDOC (ENSCLAG00000016329) #18	MARK2 (ENSCLAG00000017063) #19	RCOR2 (ENSCLAG00000017016) #21	NAA40 (ENSCLAG00000016890) #22	COX8A (ENSCLAG00000017185) #23	OTUB1 (ENSCLAG00000017123) #24	FLRT1 (ENSCLAG00000016935) #25	MACROD1 (ENSCLAG00000016401) #26	STIP1 (ENSCLAG00000017164) #27	TRPT1 (ENSCLAG00000016380) #30	FERMT3 (ENSCLAG00000016183) #28	NUDT22 (ENSCLAG00000016346) #29	DNAJC4 (ENSCLAG00000016759) #31	VEGFB (ENSCLAG00000016750) #32	FKBP2 (ENSCLAG00000017246)	PPP1R14B (ENSCLAG00000016868)	PLCB3 (ENSCLAG00000016775)	BAD (ENSCLAG00000017103)	GPR137 (ENSCLAG00000016909)
Degu	MODERN SPECIES	225	ENSODEG00000016127	PTCH1 (ENSODEG00000016019)	ENSODEG00000015865	FANCC (ENSODEG00000016098)	ENSODEG00000015655	FBP1 (ENSODEG00000015932)	FBP2 (ENSODEG00000016600)	ENSODEG00000020437	PLAAT3 (ENSODEG00000015571) #14	ATL3 (ENSODEG00000017260) #15	ENSODEG00000016120 #16	ZFTA (ENSODEG00000015496) #17	SPINDOC (ENSODEG00000015595) #18	MARK2 (ENSODEG00000017191) #19	RCOR2 (ENSODEG00000015765) #21	NAA40 (ENSODEG00000015735) #22	ENSODEG00000015780 #23	ENSODEG00000015747 #24	FLRT1 (ENSODEG00000020298) #25	MACROD1 (ENSODEG00000015291) #26	STIP1 (ENSODEG00000015289) #27	FERMT3 (ENSODEG00000015869) #28	TRPT1 (ENSODEG00000015724) #30	NUDT22 (ENSODEG00000015641) #29	DNAJC4 (ENSODEG00000016243) #31	VEGFB (ENSODEG00000016602) #32	FKBP2 (ENSODEG00000015505)	PPP1R14B (ENSODEG00000015767)	PLCB3 (ENSODEG00000015366)	BAD (ENSODEG00000016677)	GPR137 (ENSODEG00000016470)
Guinea pig	MODERN SPECIES	42	ENSCPOG00000005956	HSD17B3 (ENSCPOG00000000609)	ENSCPOG00000004544	PTCH1 (ENSCPOG00000002376)	FANCC (ENSCPOG00000032150)	AOPEP (ENSCPOG00000038711)	FBP2 (ENSCPOG00000001636)	PLAAT2 (ENSCPOG00000002122) ##14	PLAAT3 (ENSCPOG00000034238) #14	ATL3 (ENSCPOG00000003766) #15	ENSCPOG00000004811 #16	ZFTA (ENSCPOG00000033792) #17	SPINDOC (ENSCPOG00000004724) #18	MARK2 (ENSCPOG00000004728) #19	RCOR2 (ENSCPOG00000004737) #21	NAA40 (ENSCPOG00000001891) #22	COX8A (ENSCPOG00000031964) #23	OTUB1 (ENSCPOG00000022165) #24	MACROD1 (ENSCPOG00000011720) #26	FLRT1 (ENSCPOG00000020108) #25	STIP1 (ENSCPOG00000002914) #27	FERMT3 (ENSCPOG00000002919) #28	TRPT1 (ENSCPOG00000002923) #30	NUDT22 (ENSCPOG00000032982) #29	DNAJC4 (ENSCPOG00000040213) #31	VEGFB (ENSCPOG00000032042) #32	FKBP2 (ENSCPOG00000002928)	PPP1R14B (ENSCPOG00000002930)	PLCB3 (ENSCPOG00000021694)	ENSCPOG00000005670	GPR137 (ENSCPOG00000015677)
Sciuridae	ANCESTRAL SPECIES	22						ENSGT00940000154853.c.c ##14	ENSGT00940000162878	ENSGT00940000154853.c.d.b ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000161239 #11	ENSGT00940000164763.f	ENSGT00940000164763.e	ENSGT00940000162436 #12	ENSGT00940000154853.c.d.b.a.a ##14	ENSGT00940000162878	ENSGT00940000154853.c.c.a ##14	ENSGT00940000154853.c.d.b.b ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Marmotini_b	ANCESTRAL SPECIES	19								ENSGT00940000154853.c.d.b.a.b ##14	ENSGT00940000154853.d #14	ENSGT00940000158566 #15	ENSGT00940000157482.d #16	ENSGT00600000084617 #17	ENSGT00410000025985 #18	ENSGT00940000155031 #19	ENSGT00940000154196.a #21	ENSGT00390000014903 #22	ENSGT00390000006255.b.b #23	ENSGT00390000006979.a #24	ENSGT00940000159375 #25	ENSGT00940000161450 #26	ENSGT00940000154911 #27	ENSGT00390000013444.a.b.b #28	ENSGT00390000002731 #30	ENSGT00390000017869 #29	ENSGT00510000048574 #31	ENSGT00940000161844 #32	ENSGT00940000157074	ENSGT00950000182985.b.b	ENSGT00940000160539	ENSGT00390000010740	ENSGT00940000153986.b.b
Squirrel	MODERN SPECIES	199									PLAAT3 (ENSSTOG00000022553) #14	ATL3 (ENSSTOG00000000194) #15	ENSSTOG00000000199 #16	ZFTA (ENSSTOG00000027225) #17	SPINDOC (ENSSTOG00000008900) #18	MARK2 (ENSSTOG00000020436) #19	RCOR2 (ENSSTOG00000011347) #21	NAA40 (ENSSTOG00000011363) #22	COX8A (ENSSTOG00000011372) #23	OTUB1 (ENSSTOG00000026099) #24	FLRT1 (ENSSTOG00000019831) #25	MACROD1 (ENSSTOG00000034108) #26	STIP1 (ENSSTOG00000014262) #27	TRPT1 (ENSSTOG00000014285) #30	FERMT3 (ENSSTOG00000014271) #28	NUDT22 (ENSSTOG00000021715) #29	DNAJC4 (ENSSTOG00000026335) #31	VEGFB (ENSSTOG00000014290) #32	FKBP2 (ENSSTOG00000028785)	PPP1R14B (ENSSTOG00000021959)	PLCB3 (ENSSTOG00000008397)	BAD (ENSSTOG00000008441)	GPR137 (ENSSTOG00000024794)
Arctic ground squirrel	MODERN SPECIES	620								ENSUPAG00010010469 ##14	PLAAT3 (ENSUPAG00010010461) #14	ATL3 (ENSUPAG00010008777) #15	RTN3 (ENSUPAG00010008723) #16	ZFTA (ENSUPAG00010008715) #17	SPINDOC (ENSUPAG00010008697) #18	MARK2 (ENSUPAG00010008066) #19	RCOR2 (ENSUPAG00010008026) #21	NAA40 (ENSUPAG00010008016) #22	COX8A (ENSUPAG00010008008) #23	OTUB1 (ENSUPAG00010007945) #24	FLRT1 (ENSUPAG00010007939) #25	MACROD1 (ENSUPAG00010007872) #26	STIP1 (ENSUPAG00010007782) #27	FERMT3 (ENSUPAG00010007770) #28	TRPT1 (ENSUPAG00010007757) #30	NUDT22 (ENSUPAG00010007753) #29	DNAJC4 (ENSUPAG00010007738) #31	VEGFB (ENSUPAG00010007726) #32	FKBP2 (ENSUPAG00010007718)	PPP1R14B (ENSUPAG00010007704)	PLCB3 (ENSUPAG00010007660)	BAD (ENSUPAG00010007644)	GPR137 (ENSUPAG00010007604)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000005768 #11	ENSMMMG00000005778	PLAAT5 (ENSMMMG00000006630) #12	ENSMMMG00000006639 ##14	ENSMMMG00000006645	ENSMMMG00000006652 ##14	ENSMMMG00000006663	ENSMMMG00000006666 ##14	ENSMMMG00000006716 ##14	PLAAT3 (ENSMMMG00000006751) #14	ATL3 (ENSMMMG00000006763) #15	ENSMMMG00000006783 #16	SPINDOC (ENSMMMG00000006798) #18	MARK2 (ENSMMMG00000006813) #19	RCOR2 (ENSMMMG00000007445) #21	NAA40 (ENSMMMG00000007472) #22	COX8A (ENSMMMG00000007506) #23	OTUB1 (ENSMMMG00000007484) #24	MACROD1 (ENSMMMG00000007514) #26	FLRT1 (ENSMMMG00000007522) #25	STIP1 (ENSMMMG00000007560) #27	FERMT3 (ENSMMMG00000007580) #28	TRPT1 (ENSMMMG00000007609) #30	NUDT22 (ENSMMMG00000007628) #29	DNAJC4 (ENSMMMG00000007635) #31	VEGFB (ENSMMMG00000007651) #32	FKBP2 (ENSMMMG00000007672)	PPP1R14B (ENSMMMG00000007711)	PLCB3 (ENSMMMG00000007736)	BAD (ENSMMMG00000007784)	GPR137 (ENSMMMG00000007790)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005022993 #11	PLAAT5 (ENSSVLG00005022788) #12	ENSSVLG00005022666 #13	ENSSVLG00005022469 ##14	ENSSVLG00005022391	ENSSVLG00005022359 ##14	ENSSVLG00005022253 #13	PLAAT3 (ENSSVLG00005022200) #14	ATL3 (ENSSVLG00005022126) #15	RTN3 (ENSSVLG00005021816) #16	ZFTA (ENSSVLG00005021728) #17	ENSSVLG00005021665 #18	MARK2 (ENSSVLG00005020452) #19	RCOR2 (ENSSVLG00005020151) #21	ENSSVLG00005020084	ENSSVLG00005019870 #22	COX8A (ENSSVLG00005019802) #23	OTUB1 (ENSSVLG00005019708) #24	FLRT1 (ENSSVLG00005019639) #25	MACROD1 (ENSSVLG00005019517) #26	STIP1 (ENSSVLG00005019327) #27	FERMT3 (ENSSVLG00005019185) #28	TRPT1 (ENSSVLG00005018880) #30	NUDT22 (ENSSVLG00005018795) #29	DNAJC4 (ENSSVLG00005018674) #31	FKBP2 (ENSSVLG00005018547)	PPP1R14B (ENSSVLG00005018431)	PLCB3 (ENSSVLG00005018092)	BAD (ENSSVLG00005018004)	GPR137 (ENSSVLG00005017667)	KCNK4 (ENSSVLG00005017540)
Eurasian red squirrel	MODERN SPECIES	10	ENSSVLG00005019961	ENSSVLG00005019920	ENSSVLG00005019882	ENSSVLG00005019823	ENSSVLG00005019757	ENSSVLG00005019723	ENSSVLG00005019649	ENSSVLG00005019581	ENSSVLG00005019512	ENSSVLG00005019453	ENSSVLG00005019418	ENSSVLG00005019357	ENSSVLG00005019319	ENSSVLG00005019247	ENSSVLG00005019218	ENSSVLG00005019156 #22	ENSSVLG00005019062	ENSSVLG00005018957	ENSSVLG00005018911	ENSSVLG00005018882	ENSSVLG00005018846	C3orf22 (ENSSVLG00005018804)	ENSSVLG00005018790	CHST13 (ENSSVLG00005018700)	UROC1 (ENSSVLG00005018326)	ZXDC (ENSSVLG00005018229)	CFAP100 (ENSSVLG00005018018)	KLF15 (ENSSVLG00005017974)	ALDH1L1 (ENSSVLG00005017107)	SLC41A3 (ENSSVLG00005016742)	IQSEC1 (ENSSVLG00005015858)