Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000163703.a	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Glires	ANCESTRAL SPECIES	17	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000163703.a	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000163703.a	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000163703.a	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT01100000263484.B.b.a	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000163703.a	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.p #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Marmotini	ANCESTRAL SPECIES	5	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041.e #10	ENSGT00940000162137	ENSGT00940000163703.a	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.p #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Marmotini_b	ANCESTRAL SPECIES	25	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041.e #10	ENSGT00940000162137	ENSGT00940000163703.a	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.p #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00390000006350.m.a.c.b.a.b.c.a.b #34	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36
Squirrel	MODERN SPECIES	114	ADNP (ENSSTOG00000023722) #7	PARD6B (ENSSTOG00000009330) #8	RIPOR3 (ENSSTOG00000023513) #9	ENSSTOG00000025542 #10	PEDS1 (ENSSTOG00000016416) #11	ENSSTOG00000014322 #12	SNAI1 (ENSSTOG00000005866) #13	RNF114 (ENSSTOG00000005727) #14	SPATA2 (ENSSTOG00000025224) #15	SLC9A8 (ENSSTOG00000027124) #16	B4GALT5 (ENSSTOG00000003851) #17	PTGIS (ENSSTOG00000019624) #18	KCNB1 (ENSSTOG00000026242) #19	ZNFX1 (ENSSTOG00000028176) #20	DDX27 (ENSSTOG00000003645) #21	STAU1 (ENSSTOG00000003634) #22	CSE1L (ENSSTOG00000003600) #23	ARFGEF2 (ENSSTOG00000002113) #24	PREX1 (ENSSTOG00000024458) #25	SULF2 (ENSSTOG00000015550) #26	NCOA3 (ENSSTOG00000015543) #27	ZMYND8 (ENSSTOG00000006811) #28	EYA2 (ENSSTOG00000004846) #29	SLC2A10 (ENSSTOG00000014865) #30	TP53RK (ENSSTOG00000023195) #31	SLC13A3 (ENSSTOG00000021671) #32	OCSTAMP (ENSSTOG00000022202) #33	ENSSTOG00000023314 #34	ENSSTOG00000033819 #35	ELMO2 (ENSSTOG00000012875) #36	SLC35C2 (ENSSTOG00000012093) #37
Arctic ground squirrel	MODERN SPECIES	83	PARD6B (ENSUPAG00010000463) #8	RIPOR3 (ENSUPAG00010000410) #9	ENSUPAG00010000358 #10	CEBPB (ENSUPAG00010000335)	ENSUPAG00010000318	ENSUPAG00010000293 #12	SNAI1 (ENSUPAG00010000283) #13	RNF114 (ENSUPAG00010000271) #14	SPATA2 (ENSUPAG00010000256) #15	SLC9A8 (ENSUPAG00010000132) #16	B4GALT5 (ENSUPAG00010000085) #17	PTGIS (ENSUPAG00010000049) #18	KCNB1 (ENSUPAG00010000021) #19	ZNFX1 (ENSUPAG00010022013) #20	DDX27 (ENSUPAG00010022011) #21	STAU1 (ENSUPAG00010022006) #22	CSE1L (ENSUPAG00010022001) #23	ARFGEF2 (ENSUPAG00010021992) #24	PREX1 (ENSUPAG00010021977) #25	SULF2 (ENSUPAG00010021962) #26	NCOA3 (ENSUPAG00010021604) #27	ENSUPAG00010021591 #28	EYA2 (ENSUPAG00010021582) #29	SLC2A10 (ENSUPAG00010021575) #30	TP53RK (ENSUPAG00010021570) #31	SLC13A3 (ENSUPAG00010021554) #32	OCSTAMP (ENSUPAG00010021550) #33	ENSUPAG00010021548 #34	ZNF334 (ENSUPAG00010021546)	ENSUPAG00010021541 #35	ELMO2 (ENSUPAG00010021509) #36
Alpin marmot	MODERN SPECIES		PARD6B (ENSMMMG00000007746) #8	RIPOR3 (ENSMMMG00000007709) #9	ENSMMMG00000007699 #10	UBE2V1 (ENSMMMG00000007630)	SNAI1 (ENSMMMG00000007619) #13	RNF114 (ENSMMMG00000007568) #14	ENSMMMG00000007564	SPATA2 (ENSMMMG00000007555) #15	SLC9A8 (ENSMMMG00000007474) #16	B4GALT5 (ENSMMMG00000007414) #17	PTGIS (ENSMMMG00000007402) #18	KCNB1 (ENSMMMG00000007399) #19	ZNFX1 (ENSMMMG00000007354) #20	DDX27 (ENSMMMG00000007319) #21	ENSMMMG00000007315	STAU1 (ENSMMMG00000007273) #22	CSE1L (ENSMMMG00000007174) #23	ARFGEF2 (ENSMMMG00000007108) #24	ENSMMMG00000007073 #25	SULF2 (ENSMMMG00000007042) #26	NCOA3 (ENSMMMG00000006964) #27	ENSMMMG00000006638 #28	EYA2 (ENSMMMG00000006294) #29	SLC2A10 (ENSMMMG00000006268) #30	TP53RK (ENSMMMG00000006264) #31	SLC13A3 (ENSMMMG00000006229) #32	ZNF334 (ENSMMMG00000006207)	ENSMMMG00000006200 #35	ELMO2 (ENSMMMG00000006137) #36	SLC35C2 (ENSMMMG00000006119) #37	CDH22 (ENSMMMG00000006067)
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005000290 #8	RIPOR3 (ENSSVLG00005000232) #9	PTPN1 (ENSSVLG00005000174) #10	CEBPB (ENSSVLG00005004641)	ENSSVLG00005004618	UBE2V1 (ENSSVLG00005004590)	SNAI1 (ENSSVLG00005004568) #13	RNF114 (ENSSVLG00005004552) #14	SPATA2 (ENSSVLG00005004527) #15	SLC9A8 (ENSSVLG00005004467) #16	B4GALT5 (ENSSVLG00005004427) #17	PTGIS (ENSSVLG00005004394) #18	KCNB1 (ENSSVLG00005004367) #19	ZNFX1 (ENSSVLG00005004315) #20	DDX27 (ENSSVLG00005004272) #21	STAU1 (ENSSVLG00005004230) #22	CSE1L (ENSSVLG00005004177) #23	ARFGEF2 (ENSSVLG00005004112) #24	PREX1 (ENSSVLG00005004040) #25	SULF2 (ENSSVLG00005003995) #26	NCOA3 (ENSSVLG00005003963) #27	ENSSVLG00005003944	ENSSVLG00005003931	ZMYND8 (ENSSVLG00005003675) #28	EYA2 (ENSSVLG00005003292) #29	SLC2A10 (ENSSVLG00005003214) #30	TP53RK (ENSSVLG00005003190) #31	SLC13A3 (ENSSVLG00005003071) #32	OCSTAMP (ENSSVLG00005003030) #33	ZNF334 (ENSSVLG00005003016)	ENSSVLG00005002994 #35
Hystricomorpha	DUPLICATION
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304.i.a #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT01100000263484.B.b.a	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00940000157304.i.a #22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00940000157304.i.a #22
Long-tailed chinchilla	MODERN SPECIES	152	PARD6B (ENSCLAG00000009267) #8	RIPOR3 (ENSCLAG00000004580) #9	PTPN1 (ENSCLAG00000005789) #10	ENSCLAG00000006078	PEDS1 (ENSCLAG00000005635) #11	ENSCLAG00000006741 #12	SNAI1 (ENSCLAG00000012285) #13	RNF114 (ENSCLAG00000012925) #14	SPATA2 (ENSCLAG00000017362) #15	SLC9A8 (ENSCLAG00000004548) #16	B4GALT5 (ENSCLAG00000006323) #17	PTGIS (ENSCLAG00000005501) #18	KCNB1 (ENSCLAG00000005669) #19	ZNFX1 (ENSCLAG00000006567) #20	DDX27 (ENSCLAG00000008075) #21	ENSCLAG00000006516 #22	CSE1L (ENSCLAG00000006169) #23	ARFGEF2 (ENSCLAG00000010063) #24	PREX1 (ENSCLAG00000006550) #25	SULF2 (ENSCLAG00000007393) #26	NCOA3 (ENSCLAG00000008442) #27	ZMYND8 (ENSCLAG00000006367) #28	EYA2 (ENSCLAG00000006129) #29	SLC2A10 (ENSCLAG00000009993) #30	TP53RK (ENSCLAG00000015459) #31	SLC13A3 (ENSCLAG00000006313) #32	OCSTAMP (ENSCLAG00000007781) #33	ENSCLAG00000008145 #35	ELMO2 (ENSCLAG00000013857) #36	SLC35C2 (ENSCLAG00000013350) #37	CDH22 (ENSCLAG00000014649)
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000012434	PTPN1 (ENSHGLG00000005082) #10	ENSHGLG00000042761	PEDS1 (ENSHGLG00000005163) #11	ENSHGLG00000049806 #12	SNAI1 (ENSHGLG00000005310) #13	RNF114 (ENSHGLG00000005669) #14	SPATA2 (ENSHGLG00000000487) #15	SLC9A8 (ENSHGLG00000006337) #16	B4GALT5 (ENSHGLG00000006719) #17	PTGIS (ENSHGLG00000007083) #18	KCNB1 (ENSHGLG00000038195) #19	ENSHGLG00000049086	ZNFX1 (ENSHGLG00000008068) #20	DDX27 (ENSHGLG00000008388) #21	ENSHGLG00000008730 #22	ENSHGLG00000009067 #23	ARFGEF2 (ENSHGLG00000003963) #24	PREX1 (ENSHGLG00000004434) #25	SULF2 (ENSHGLG00000005167) #26	NCOA3 (ENSHGLG00000005862) #27	ENSHGLG00000002750	ENSHGLG00000015371 #28	EYA2 (ENSHGLG00000017740) #29	ENSHGLG00000044962	SLC2A10 (ENSHGLG00000004455) #30	TP53RK (ENSHGLG00000046503) #31	SLC13A3 (ENSHGLG00000005024) #32	ENSHGLG00000035011	ENSHGLG00000046283	ENSHGLG00000006815 #35
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00940000157304.i.b #22
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00940000157304.i.b #22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00940000157304.i.b #22
Long-tailed chinchilla	MODERN SPECIES	237													TLE4 (ENSCLAG00000002536)	ENSCLAG00000002367	TLE1 (ENSCLAG00000003711)	ENSCLAG00000002784 #22	ENSCLAG00000004622	MGAT1 (ENSCLAG00000003930)	ZFP62 (ENSCLAG00000003627)	ENSCLAG00000017516	ENSCLAG00000017510	TRIM7 (ENSCLAG00000004138)	ENSCLAG00000003817	RACK1 (ENSCLAG00000003587)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000032788	ENSHGLG00000002433	ENSHGLG00000000860	ENSHGLG00000044823	ENSHGLG00000034122	ENSHGLG00000046583	ENSHGLG00000008784	ENSHGLG00000020015	ENSHGLG00000038189	ENSHGLG00000033611	ENSHGLG00000042291	ENSHGLG00000001633	ENSHGLG00000019778	ENSHGLG00000050470	ENSHGLG00000045820	ENSHGLG00000034333 #22	ENSHGLG00000003770	SRPX2 (ENSHGLG00000001326)	TSPAN6 (ENSHGLG00000042596)	ENSHGLG00000002242	ENSHGLG00000040327	ENSHGLG00000050758	ENSHGLG00000002330	ENSHGLG00000002392	ENSHGLG00000019892	ENSHGLG00000047327	ENSHGLG00000044426	ENSHGLG00000041060	ENSHGLG00000038259	ENSHGLG00000046083	ENSHGLG00000000188
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00940000157304.j #22
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304.j #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT01100000263484.B.b.a	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00740000115534.a.a #12	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304.j #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37	ENSGT00940000169145
Degu	MODERN SPECIES	118	PARD6B (ENSODEG00000005877) #8	RIPOR3 (ENSODEG00000005970) #9	PTPN1 (ENSODEG00000009073) #10	CEBPB (ENSODEG00000007763)	PEDS1 (ENSODEG00000006093) #11	ENSODEG00000006622 #12	SNAI1 (ENSODEG00000007856) #13	RNF114 (ENSODEG00000006139) #14	SPATA2 (ENSODEG00000006882) #15	SLC9A8 (ENSODEG00000007225) #16	ENSODEG00000006524 #17	PTGIS (ENSODEG00000006946) #18	KCNB1 (ENSODEG00000007239) #19	ZNFX1 (ENSODEG00000006490) #20	DDX27 (ENSODEG00000006281) #21	STAU1 (ENSODEG00000006523) #22	ENSODEG00000006918 #23	ARFGEF2 (ENSODEG00000008385) #24	PREX1 (ENSODEG00000007710) #25	ENSODEG00000007170	SULF2 (ENSODEG00000007688) #26	ENSODEG00000006958	NCOA3 (ENSODEG00000007613) #27	ENSODEG00000019407	ZMYND8 (ENSODEG00000008445) #28	EYA2 (ENSODEG00000007072) #29	ENSODEG00000008444	ENSODEG00000008838	SLC2A10 (ENSODEG00000009271) #30	TP53RK (ENSODEG00000009596) #31	SLC13A3 (ENSODEG00000007662) #32
Guinea pig	MODERN SPECIES	45				CEBPB (ENSCPOG00000000811)	PEDS1 (ENSCPOG00000023991) #11	ENSCPOG00000014413 #12	SNAI1 (ENSCPOG00000026663) #13	RNF114 (ENSCPOG00000005093) #14	SPATA2 (ENSCPOG00000034717) #15	SLC9A8 (ENSCPOG00000013530) #16	B4GALT5 (ENSCPOG00000013380) #17	PTGIS (ENSCPOG00000034249) #18	KCNB1 (ENSCPOG00000002097) #19	ZNFX1 (ENSCPOG00000010937) #20	DDX27 (ENSCPOG00000002009) #21	STAU1 (ENSCPOG00000005566) #22	ENSCPOG00000005554 #23	ARFGEF2 (ENSCPOG00000008910) #24	PREX1 (ENSCPOG00000030479) #25	SULF2 (ENSCPOG00000036428) #26	NCOA3 (ENSCPOG00000008077) #27	ZMYND8 (ENSCPOG00000013351) #28	EYA2 (ENSCPOG00000013346) #29	SLC2A10 (ENSCPOG00000025667) #30	TP53RK (ENSCPOG00000005477) #31	SLC13A3 (ENSCPOG00000010649) #32	OCSTAMP (ENSCPOG00000010641) #33	ENSCPOG00000026807	ENSCPOG00000030815 #35	ELMO2 (ENSCPOG00000002958) #36	SLC35C2 (ENSCPOG00000034316) #37
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Northern American deer mouse	MODERN SPECIES	17	Adnp (ENSPEMG00000028284) #7	Pard6b (ENSPEMG00000015881) #8	Ripor3 (ENSPEMG00000011182) #9	Ptpn1 (ENSPEMG00000012811) #10	Peds1 (ENSPEMG00000006010) #11	ENSPEMG00000001442	Snai1 (ENSPEMG00000023213) #13	ENSPEMG00000023570	Spata2 (ENSPEMG00000027358) #15	Slc9a8 (ENSPEMG00000022094) #16	ENSPEMG00000000220	Ptgis (ENSPEMG00000018632) #18	ENSPEMG00000001839	Znfx1 (ENSPEMG00000008042) #20	Ddx27 (ENSPEMG00000023215) #21	Stau1 (ENSPEMG00000022045) #22	Cse1l (ENSPEMG00000000944) #23	Arfgef2 (ENSPEMG00000022186) #24	ENSPEMG00000022389	Prex1 (ENSPEMG00000016558) #25	ENSPEMG00000007965	Ncoa3 (ENSPEMG00000020950) #27	ENSPEMG00000022847	Eya2 (ENSPEMG00000020764) #29	Slc2a10 (ENSPEMG00000021057) #30	ENSPEMG00000024430	Slc13a3 (ENSPEMG00000002596) #32	Ocstamp (ENSPEMG00000004330) #33	Zfp334 (ENSPEMG00000009666)	ENSPEMG00000014026	Elmo2 (ENSPEMG00000010393) #36
Prairie vole	MODERN SPECIES	357	Pard6b (ENSMOCG00000003321) #8	Ripor3 (ENSMOCG00000010739) #9	Ptpn1 (ENSMOCG00000001636) #10	Cebpb (ENSMOCG00000010607)	Peds1 (ENSMOCG00000010275) #11	Ube2v1 (ENSMOCG00000012071)	Snai1 (ENSMOCG00000007847) #13	Rnf114 (ENSMOCG00000015529) #14	Spata2 (ENSMOCG00000017632) #15	Slc9a8 (ENSMOCG00000004864) #16	B4galt5 (ENSMOCG00000011995) #17	Ptgis (ENSMOCG00000012430) #18	Kcnb1 (ENSMOCG00000001197) #19	Znfx1 (ENSMOCG00000005411) #20	Ddx27 (ENSMOCG00000019594) #21	Stau1 (ENSMOCG00000018743) #22	Cse1l (ENSMOCG00000013597) #23	Arfgef2 (ENSMOCG00000019572) #24	ENSMOCG00000004008 #31	Prex1 (ENSMOCG00000019092) #25	Sulf2 (ENSMOCG00000000726) #26	Ncoa3 (ENSMOCG00000019647) #27	ENSMOCG00000015474 #28	Eya2 (ENSMOCG00000013910) #29	Slc2a10 (ENSMOCG00000018022) #30	ENSMOCG00000020701 #31	Slc13a3 (ENSMOCG00000007302) #32	Ocstamp (ENSMOCG00000000766) #33	Zfp334 (ENSMOCG00000008498)	Zfp663 (ENSMOCG00000013692) #35	ENSMOCG00000014702
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Chinese hamster chok1gshd	MODERN SPECIES	195	Pard6b (ENSCGRG00001014206) #8	Ripor3 (ENSCGRG00001013099) #9	Ptpn1 (ENSCGRG00001012267) #10	Cebpb (ENSCGRG00001001737)	Peds1 (ENSCGRG00001010523) #11	Ube2v1 (ENSCGRG00001009565)	Snai1 (ENSCGRG00001007749) #13	Rnf114 (ENSCGRG00001006890) #14	Spata2 (ENSCGRG00001005279) #15	Slc9a8 (ENSCGRG00001022939) #16	B4galt5 (ENSCGRG00001021312) #17	Ptgis (ENSCGRG00001019919) #18	Kcnb1 (ENSCGRG00001019221) #19	Znfx1 (ENSCGRG00001017355) #20	Ddx27 (ENSCGRG00001015330) #21	Stau1 (ENSCGRG00001013453) #22	Cse1l (ENSCGRG00001005670) #23	Arfgef2 (ENSCGRG00001018645) #24	Prex1 (ENSCGRG00001012312) #25	Sulf2 (ENSCGRG00001004952) #26	Ncoa3 (ENSCGRG00001010532) #27	ENSCGRG00001006183	Zmynd8 (ENSCGRG00001023160) #28	Eya2 (ENSCGRG00001018570) #29	Slc2a10 (ENSCGRG00001017305) #30	ENSCGRG00001017009 #31	Slc13a3 (ENSCGRG00001015064) #32	Ocstamp (ENSCGRG00001013024) #33	Zfp334 (ENSCGRG00001012608)	Zfp663 (ENSCGRG00001011556) #35	Elmo2 (ENSCGRG00001005339) #36
Golden Hamster	MODERN SPECIES	664	Adnp (ENSMAUG00000020819) #7	Pard6b (ENSMAUG00000010497) #8	Ripor3 (ENSMAUG00000010157) #9	Ptpn1 (ENSMAUG00000010010) #10	Peds1 (ENSMAUG00000016961) #11	Ube2v1 (ENSMAUG00000020962)	Snai1 (ENSMAUG00000021592) #13	Rnf114 (ENSMAUG00000019385) #14	Spata2 (ENSMAUG00000020910) #15	Slc9a8 (ENSMAUG00000018259) #16	B4galt5 (ENSMAUG00000015144) #17	Ptgis (ENSMAUG00000016166) #18	Kcnb1 (ENSMAUG00000019058) #19	Znfx1 (ENSMAUG00000016416) #20	Ddx27 (ENSMAUG00000000552) #21	Stau1 (ENSMAUG00000013846) #22	Cse1l (ENSMAUG00000001362) #23	Arfgef2 (ENSMAUG00000012203) #24	Prex1 (ENSMAUG00000021873) #25
Murinae	ANCESTRAL SPECIES	1	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Mus	ANCESTRAL SPECIES	1	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.k #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00950000183211.a.a.a #8	ENSGT00940000153717.a.b #9	ENSGT00940000158041 #10	ENSGT00940000162137	ENSGT00940000162354 #11	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a #13	ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.k #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
Mus_C	ANCESTRAL SPECIES														ENSGT00960000193069	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897.k #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000163620	ENSGT00940000164035 #35	ENSGT00940000159236 #36	ENSGT00510000048078 #37
spretus	MODERN SPECIES	11	Ripor3 (MGP_SPRETEiJ_G0025634) #9	Ptpn1 (MGP_SPRETEiJ_G0025633) #10	Cebpb (MGP_SPRETEiJ_G0025632)	Peds1 (MGP_SPRETEiJ_G0025631) #11	MGP_SPRETEiJ_G0025630	Snai1 (MGP_SPRETEiJ_G0025629) #13	Rnf114 (MGP_SPRETEiJ_G0025628) #14	Spata2 (MGP_SPRETEiJ_G0025627) #15	Slc9a8 (MGP_SPRETEiJ_G0025626) #16	B4galt5 (MGP_SPRETEiJ_G0025625) #17	Ptgis (MGP_SPRETEiJ_G0025624) #18	Kcnb1 (MGP_SPRETEiJ_G0025623) #19	MGP_SPRETEiJ_G0025622	Znfx1 (MGP_SPRETEiJ_G0025621) #20	Ddx27 (MGP_SPRETEiJ_G0025620) #21	Stau1 (MGP_SPRETEiJ_G0025619) #22	Cse1l (MGP_SPRETEiJ_G0025618) #23	Arfgef2 (MGP_SPRETEiJ_G0025617) #24	MGP_SPRETEiJ_G0025616 #31	Prex1 (MGP_SPRETEiJ_G0025615) #25	Sulf2 (MGP_SPRETEiJ_G0025614) #26	Ncoa3 (MGP_SPRETEiJ_G0025613) #27	Zmynd8 (MGP_SPRETEiJ_G0025612) #28	Eya2 (MGP_SPRETEiJ_G0025611) #29	Slc2a10 (MGP_SPRETEiJ_G0025610) #30	MGP_SPRETEiJ_G0025609 #31	Slc13a3 (MGP_SPRETEiJ_G0025608) #32	Ocstamp (MGP_SPRETEiJ_G0025607) #33	Zfp334 (MGP_SPRETEiJ_G0025606)	Zfp663 (MGP_SPRETEiJ_G0025605) #35	Elmo2 (MGP_SPRETEiJ_G0025604) #36
Steppe mouse	MODERN SPECIES	2968	ENSMSIG00000031391	Ube2v1 (ENSMSIG00000031383)	Snai1 (ENSMSIG00000031381) #13	ENSMSIG00000031380	ENSMSIG00000031378	Rnf114 (ENSMSIG00000031377) #14	ENSMSIG00000031374 #15	Slc9a8 (ENSMSIG00000031352) #16	B4galt5 (ENSMSIG00000031348) #17	Ptgis (ENSMSIG00000031341) #18	Kcnb1 (ENSMSIG00000031340) #19	ENSMSIG00000031338	ENSMSIG00000031334	Znfx1 (ENSMSIG00000031330) #20	Ddx27 (ENSMSIG00000031324) #21	Stau1 (ENSMSIG00000031320) #22	Cse1l (ENSMSIG00000031308) #23	Arfgef2 (ENSMSIG00000031303) #24
Mouse	MODERN SPECIES	11	Ripor3 (ENSMUSG00000074577) #9	Ptpn1 (ENSMUSG00000027540) #10	Cebpb (ENSMUSG00000056501)	Peds1 (ENSMUSG00000090213) #11	Gm20431 (ENSMUSG00000089739)	Ube2v1 (ENSMUSG00000078923)	Snai1 (ENSMUSG00000042821) #13	Rnf114 (ENSMUSG00000006418) #14	Spata2 (ENSMUSG00000047030) #15	Slc9a8 (ENSMUSG00000039463) #16	B4galt5 (ENSMUSG00000017929) #17	Ptgis (ENSMUSG00000017969) #18	Kcnb1 (ENSMUSG00000050556) #19	Znfx1 (ENSMUSG00000039501) #20	Ddx27 (ENSMUSG00000017999) #21	Stau1 (ENSMUSG00000039536) #22	Cse1l (ENSMUSG00000002718) #23	Arfgef2 (ENSMUSG00000074582) #24	Trp53rkb (ENSMUSG00000042854) #31	Prex1 (ENSMUSG00000039621) #25	Sulf2 (ENSMUSG00000006800) #26	Ncoa3 (ENSMUSG00000027678) #27	Zmynd8 (ENSMUSG00000039671) #28	Eya2 (ENSMUSG00000017897) #29	Slc2a10 (ENSMUSG00000027661) #30	Trp53rka (ENSMUSG00000039725) #31	Slc13a3 (ENSMUSG00000018459) #32	Ocstamp (ENSMUSG00000027670) #33	Zfp334 (ENSMUSG00000017667)	Zfp663 (ENSMUSG00000056824) #35	Elmo2 (ENSMUSG00000017670) #36
Ryukyu mouse	MODERN SPECIES	11	Ripor3 (MGP_CAROLIEiJ_G0024714) #9	Ptpn1 (MGP_CAROLIEiJ_G0024713) #10	Cebpb (MGP_CAROLIEiJ_G0024712)	Peds1 (MGP_CAROLIEiJ_G0024711) #11	MGP_CAROLIEiJ_G0024710	Snai1 (MGP_CAROLIEiJ_G0024709) #13	Rnf114 (MGP_CAROLIEiJ_G0024708) #14	Spata2 (MGP_CAROLIEiJ_G0024707) #15	Slc9a8 (MGP_CAROLIEiJ_G0024706) #16	B4galt5 (MGP_CAROLIEiJ_G0024705) #17	Ptgis (MGP_CAROLIEiJ_G0024704) #18	Kcnb1 (MGP_CAROLIEiJ_G0024703) #19	MGP_CAROLIEiJ_G0024702	Znfx1 (MGP_CAROLIEiJ_G0024701) #20	Ddx27 (MGP_CAROLIEiJ_G0024700) #21	Stau1 (MGP_CAROLIEiJ_G0024699) #22	Cse1l (MGP_CAROLIEiJ_G0024698) #23	Arfgef2 (MGP_CAROLIEiJ_G0024697) #24	Prex1 (MGP_CAROLIEiJ_G0024696) #25	Sulf2 (MGP_CAROLIEiJ_G0024695) #26	Ncoa3 (MGP_CAROLIEiJ_G0024694) #27	Zmynd8 (MGP_CAROLIEiJ_G0024693) #28	Eya2 (MGP_CAROLIEiJ_G0024692) #29	Slc2a10 (MGP_CAROLIEiJ_G0024691) #30	MGP_CAROLIEiJ_G0024689 #31	Slc13a3 (MGP_CAROLIEiJ_G0024688) #32	Ocstamp (MGP_CAROLIEiJ_G0024687) #33	Zfp334 (MGP_CAROLIEiJ_G0024686)	Zfp663 (MGP_CAROLIEiJ_G0024685) #35	Elmo2 (MGP_CAROLIEiJ_G0024684) #36	Slc35c2 (MGP_CAROLIEiJ_G0024683) #37
Shrew mouse	MODERN SPECIES	16	Ripor3 (MGP_PahariEiJ_G0026156) #9	Ptpn1 (MGP_PahariEiJ_G0026155) #10	Cebpb (MGP_PahariEiJ_G0026154)	Peds1 (MGP_PahariEiJ_G0026153) #11	MGP_PahariEiJ_G0026152	Snai1 (MGP_PahariEiJ_G0026151) #13	Rnf114 (MGP_PahariEiJ_G0026150) #14	Spata2 (MGP_PahariEiJ_G0026149) #15	Slc9a8 (MGP_PahariEiJ_G0026148) #16	B4galt5 (MGP_PahariEiJ_G0026147) #17	Ptgis (MGP_PahariEiJ_G0026146) #18	Kcnb1 (MGP_PahariEiJ_G0026145) #19	MGP_PahariEiJ_G0026144	Znfx1 (MGP_PahariEiJ_G0026143) #20	Ddx27 (MGP_PahariEiJ_G0026142) #21	Stau1 (MGP_PahariEiJ_G0026141) #22	Cse1l (MGP_PahariEiJ_G0026140) #23	Arfgef2 (MGP_PahariEiJ_G0026139) #24	Prex1 (MGP_PahariEiJ_G0026138) #25	Sulf2 (MGP_PahariEiJ_G0026137) #26	Ncoa3 (MGP_PahariEiJ_G0026136) #27	MGP_PahariEiJ_G0026135 #28	MGP_PahariEiJ_G0026134	Slc2a10 (MGP_PahariEiJ_G0026133) #30	MGP_PahariEiJ_G0026131 #31	Slc13a3 (MGP_PahariEiJ_G0026130) #32	Ocstamp (MGP_PahariEiJ_G0026129) #33	Zfp334 (MGP_PahariEiJ_G0026128)	MGP_PahariEiJ_G0026127 #35	Elmo2 (MGP_PahariEiJ_G0026126) #36	Slc35c2 (MGP_PahariEiJ_G0026125) #37
Rat	MODERN SPECIES	13	Ripor3 (ENSRNOG00000010791) #9	Ptpn1 (ENSRNOG00000010574) #10	Cebpb (ENSRNOG00000057347)	Peds1 (ENSRNOG00000060571) #11	LOC679539 (ENSRNOG00000025580)	Snai1 (ENSRNOG00000009594) #13	Rnf114 (ENSRNOG00000060821) #14	Spata2 (ENSRNOG00000009207) #15	Slc9a8 (ENSRNOG00000008354) #16	B4galt5 (ENSRNOG00000008283) #17	Rpl38-ps9 (ENSRNOG00000048701)	AABR07054614.1 (ENSRNOG00000008245) #18	Kcnb1 (ENSRNOG00000046949) #19	Znfx1 (ENSRNOG00000008194) #20	Ddx27 (ENSRNOG00000008081) #21	Stau1 (ENSRNOG00000007781) #22	Cse1l (ENSRNOG00000007665) #23	Arfgef2 (ENSRNOG00000007485) #24	Trp53rkb (ENSRNOG00000007285) #31	ENSRNOG00000064408	Prex1 (ENSRNOG00000006952) #25	AABR07054608.1 (ENSRNOG00000052603)	Sulf2 (ENSRNOG00000006052) #26	Ncoa3 (ENSRNOG00000005616) #27	Zmynd8 (ENSRNOG00000019154) #28	Eya2 (ENSRNOG00000019203) #29	Slc2a10 (ENSRNOG00000025384) #30	Trp53rka (ENSRNOG00000029470) #31	Slc13a3 (ENSRNOG00000019118) #32	Ocstamp (ENSRNOG00000019110) #33	Zfp334 (ENSRNOG00000019099)
Upper Galilee mountains blind mole rat	MODERN SPECIES	925																Stau1 (ENSNGAG00000007108) #22	Cse1l (ENSNGAG00000001115) #23	Arfgef2 (ENSNGAG00000023275) #24
Lesser Egyptian jerboa	MODERN SPECIES	107	Kcng1 (ENSJJAG00000012496)	Mocs3 (ENSJJAG00000001507)	Dpm1 (ENSJJAG00000015047)	Adnp (ENSJJAG00000022527) #7	Ptpn1 (ENSJJAG00000023377) #10	Cebpb (ENSJJAG00000023307)	Peds1 (ENSJJAG00000002964) #11	Ube2v1 (ENSJJAG00000011640)	Snai1 (ENSJJAG00000017317) #13	Rnf114 (ENSJJAG00000021901) #14	Slc9a8 (ENSJJAG00000024393) #16	B4galt5 (ENSJJAG00000022264) #17	Kcnb1 (ENSJJAG00000015449) #19	Znfx1 (ENSJJAG00000019468) #20	Ddx27 (ENSJJAG00000009056) #21	Stau1 (ENSJJAG00000020032) #22	Cse1l (ENSJJAG00000016509) #23	Arfgef2 (ENSJJAG00000010494) #24	Sulf2 (ENSJJAG00000009639) #26	Ncoa3 (ENSJJAG00000009506) #27	Slc2a10 (ENSJJAG00000015033) #30	ENSJJAG00000017483 #31	Slc13a3 (ENSJJAG00000022617) #32	ENSJJAG00000016360 #37	ENSJJAG00000010407	ENSJJAG00000014711	Cd40 (ENSJJAG00000019525)	Ncoa5 (ENSJJAG00000009674)	Slc12a5 (ENSJJAG00000010588)	Mmp9 (ENSJJAG00000011491)	Zfp335 (ENSJJAG00000020301)
Kangaroo rat	MODERN SPECIES	394	Adnp (ENSDORG00000024209) #7	Pard6b (ENSDORG00000007031) #8	Ripor3 (ENSDORG00000026878) #9	Ptpn1 (ENSDORG00000013016) #10	ENSDORG00000004219	ENSDORG00000027579 #12	Snai1 (ENSDORG00000025372) #13	Rnf114 (ENSDORG00000014937) #14	Spata2 (ENSDORG00000026324) #15	Slc9a8 (ENSDORG00000002709) #16	B4galt5 (ENSDORG00000001984) #17	Ptgis (ENSDORG00000013245) #18	Kcnb1 (ENSDORG00000026603) #19	Znfx1 (ENSDORG00000014142) #20	Ddx27 (ENSDORG00000014137) #21	Stau1 (ENSDORG00000030220) #22	Cse1l (ENSDORG00000013960) #23	Arfgef2 (ENSDORG00000013169) #24	Prex1 (ENSDORG00000014067) #25	Sulf2 (ENSDORG00000002344) #26	Ncoa3 (ENSDORG00000002342) #27
Lagomorpha	ANCESTRAL SPECIES	38								ENSGT00950000182909.b.b.a #14	ENSGT00530000063956.a #15	ENSGT00940000157210 #16	ENSGT00940000158019 #17	ENSGT00940000153709.A #18	ENSGT00940000154899 #19	ENSGT00940000155154.b #20	ENSGT00550000074997 #21	ENSGT00940000157304 #22	ENSGT00550000074884 #23	ENSGT00940000158950 #24	ENSGT00940000159925 #25	ENSGT00940000159151 #26	ENSGT00950000183021.a.b #27	ENSGT00940000154897 #28	ENSGT00950000182978.A.a.b.b #29	ENSGT00940000159430 #30	ENSGT00390000012914 #31	ENSGT01030000234550.a.b #32	ENSGT00940000153269.b.a #33	ENSGT00940000159236 #36	ENSGT00510000048078 #37	ENSGT00940000159376.h	ENSGT00940000159376.g
Rabbit	MODERN SPECIES	458													KCNB1 (ENSOCUG00000024174) #19	ZNFX1 (ENSOCUG00000009811) #20	DDX27 (ENSOCUG00000016108) #21	STAU1 (ENSOCUG00000006214) #22	CSE1L (ENSOCUG00000005459) #23	ARFGEF2 (ENSOCUG00000005446) #24	PREX1 (ENSOCUG00000012654) #25	SULF2 (ENSOCUG00000024273) #26	NCOA3 (ENSOCUG00000005988) #27	ZMYND8 (ENSOCUG00000005576) #28	EYA2 (ENSOCUG00000002658) #29	SLC2A10 (ENSOCUG00000024203) #30	TP53RK (ENSOCUG00000036621) #31	SLC13A3 (ENSOCUG00000017615) #32	OCSTAMP (ENSOCUG00000001648) #33	ELMO2 (ENSOCUG00000007650) #36	SLC35C2 (ENSOCUG00000013391) #37	ENSOCUG00000014684	ENSOCUG00000038614
Pika	MODERN SPECIES	774														ZNFX1 (ENSOPRG00000014619) #20	DDX27 (ENSOPRG00000014589) #21	STAU1 (ENSOPRG00000014569) #22	CSE1L (ENSOPRG00000014530) #23	ARFGEF2 (ENSOPRG00000014468) #24	ENSOPRG00000014455	PREX1 (ENSOPRG00000014409) #25
Tree shrew	MODERN SPECIES	1052																STAU1 (ENSTBEG00000009404) #22	CSE1L (ENSTBEG00000008338) #23	ARFGEF2 (ENSTBEG00000004373) #24