Percora_a ANCESTRAL SPECIES 2 ENSGT00940000156438 #7 ENSGT00390000007247 #8 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00530000064879.a.a.a #17 ENSGT00530000064879.a.a.b ##31 ENSGT00940000166945.e #21 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 ENSGT00390000010822 #37 Bovidae ANCESTRAL SPECIES 2 ENSGT00940000156438 #7 ENSGT00390000007247 #8 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00530000064879.a.a.a #17 ENSGT00530000064879.a.a.b ##31 ENSGT00940000166945.e #21 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 ENSGT00390000010822 #37 Caprinae ANCESTRAL SPECIES 1 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 #7 ENSGT00390000007247 #8 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b.k #14 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00530000064879.a.a.a #17 ENSGT01100000263482.C.c.b.b.a.b.l #19 ENSGT00940000166945.e #21 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 ENSGT00390000010822.i #37 Rambouillet Sheep MODERN SPECIES 2 TAF15 (ENSOARG00020020914) #7 HEATR9 (ENSOARG00020021381) #8 ENSOARG00020021566 #9 CCL16 (ENSOARG00020021594) #10 CCL14 (ENSOARG00020021620) #11 ENSOARG00020021658 #12 ENSOARG00020021698 #13 ENSOARG00020021729 #14 ENSOARG00020021765 #15 ENSOARG00020021814 #16 ENSOARG00020021888 #17 ENSOARG00020021908 #18 ENSOARG00020021921 #19 ENSOARG00020021939 #20 ENSOARG00020021955 #21 HEATR6 (ENSOARG00020021983) #22 HNF1B (ENSOARG00020022281) #23 DDX52 (ENSOARG00020022421) #24 SYNRG (ENSOARG00020022567) #25 DUSP14 (ENSOARG00020023589) #26 TADA2A (ENSOARG00020023601) #27 ACACA (ENSOARG00020023744) #28 ENSOARG00020024324 #29 AATF (ENSOARG00020024358) #30 ENSOARG00020024441 #31 LHX1 (ENSOARG00020024449) #32 MRM1 (ENSOARG00020024467) #33 GGNBP2 (ENSOARG00020024497) #34 PIGW (ENSOARG00020024630) #35 MYO19 (ENSOARG00020024654) #36 ZNHIT3 (ENSOARG00020024765) #37 Goat MODERN SPECIES 10 GAS2L2 (ENSCHIG00000026688) C17orf50 (ENSCHIG00000018412) MMP28 (ENSCHIG00000027070) ENSCHIG00000027235 #7 HEATR9 (ENSCHIG00000021394) #8 ENSCHIG00000016688 #9 ENSCHIG00000004359 CCL14 (ENSCHIG00000015200) #11 ENSCHIG00000021417 #12 ENSCHIG00000003747 #14 ENSCHIG00000017081 #15 ENSCHIG00000026450 #16 ENSCHIG00000014748 #19 ENSCHIG00000017931 ENSCHIG00000026795 HEATR6 (ENSCHIG00000020669) #22 HNF1B (ENSCHIG00000016007) #23 DDX52 (ENSCHIG00000006275) #24 SYNRG (ENSCHIG00000018157) #25 DUSP14 (ENSCHIG00000007892) #26 ENSCHIG00000019766 #27 C17orf78 (ENSCHIG00000025907) #29 ACACA (ENSCHIG00000014642) #28 AATF (ENSCHIG00000010438) #30 LHX1 (ENSCHIG00000022067) #32 MRM1 (ENSCHIG00000008558) #33 DHRS11 (ENSCHIG00000014977) GGNBP2 (ENSCHIG00000018194) #34 PIGW (ENSCHIG00000013107) #35 MYO19 (ENSCHIG00000025193) #36 ENSCHIG00000015170 #37 Bovinae ANCESTRAL SPECIES ENSGT00390000007247 #8 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00940000166945.f ##21 ENSGT00530000064879.a.a.b ##31 ENSGT00530000064879.a.b #31 ENSGT00940000166945.e #21 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 ENSGT00390000010822 #37 Bos ANCESTRAL SPECIES 1 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b.n #19 ENSGT00990000211580 ENSGT01100000263482.C.c.b.b.a.b.m.a #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00530000064879.a.a.a #17 ENSGT01100000263482.C.c.b.b.a.b.m.b #19 ENSGT00940000168945 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018145.xc.e.b ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 Bos_b ANCESTRAL SPECIES 38 ENSGT01100000263482.D #9 ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.b.a.b.m.b #19 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b.n #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00530000064879.a.a.a #17 ENSGT00530000064879.a.a.b ##31 ENSGT00530000064879.b ##31 ENSGT00940000168945 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018145.xc.e.b ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 Cow MODERN SPECIES 10 CCL5 (ENSBTAG00000053649) #9 CCL16 (ENSBTAG00000053578) #10 CCL14 (ENSBTAG00000010738) #11 ENSBTAG00000048980 ENSBTAG00000010155 #12 ENSBTAG00000048626 #13 ENSBTAG00000003289 #19 ENSBTAG00000051377 CCL4 (ENSBTAG00000025257) #16 ENSBTAG00000046944 ##21 WFDC18 (ENSBTAG00000039504) ##31 ENSBTAG00000025260 ##31 CCL3 (ENSBTAG00000025250) #15 ENSBTAG00000025258 ENSBTAG00000053991 HEATR6 (ENSBTAG00000009635) #22 HNF1B (ENSBTAG00000004710) #23 DDX52 (ENSBTAG00000010313) #24 SYNRG (ENSBTAG00000010292) #25 DUSP14 (ENSBTAG00000010279) #26 TADA2A (ENSBTAG00000014677) #27 C19H17orf78 (ENSBTAG00000025242) #29 ACACA (ENSBTAG00000017567) #28 AATF (ENSBTAG00000021927) #30 LHX1 (ENSBTAG00000033562) #32 ENSBTAG00000000560 MRM1 (ENSBTAG00000010311) #33 DHRS11 (ENSBTAG00000010297) GGNBP2 (ENSBTAG00000010290) #34 PIGW (ENSBTAG00000034396) #35 MYO19 (ENSBTAG00000012675) #36 Hybrid Bos Indicus MODERN SPECIES 10 CCL16 (ENSBIXG00005021613) #10 ENSBIXG00005021642 #11 ENSBIXG00005003651 ENSBIXG00005021684 #12 ENSBIXG00005021705 #19 ENSBIXG00005021738 #13 ENSBIXG00005021752 ENSBIXG00005021800 #16 ENSBIXG00005021806 #17 ENSBIXG00005003678 ##31 ENSBIXG00005006270 #31 ENSBIXG00005021849 ##31 ENSBIXG00005021887 #15 ENSBIXG00005022003 ENSBIXG00005022035 HEATR6 (ENSBIXG00005003757) #22 HNF1B (ENSBIXG00005022168) #23 DDX52 (ENSBIXG00005005546) #24 SYNRG (ENSBIXG00005022316) #25 DUSP14 (ENSBIXG00005022366) #26 TADA2A (ENSBIXG00005022404) #27 ENSBIXG00005022420 #29 ACACA (ENSBIXG00005023249) #28 AATF (ENSBIXG00005023328) #30 LHX1 (ENSBIXG00005005556) #32 ENSBIXG00005023390 ENSBIXG00005023421 MRM1 (ENSBIXG00005023451) #33 DHRS11 (ENSBIXG00005023487) GGNBP2 (ENSBIXG00005023535) #34 PIGW (ENSBIXG00005023567) #35 Bos_a ANCESTRAL SPECIES ENSGT01100000263482.B #10 ENSGT01100000263482.C.c.b.a.b.b #11 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b #12 ENSGT01100000263482.C.c.b.a.a.a #13 ENSGT01100000263482.C.c.b.b.a.b.m.a #19 ENSGT01100000263482.C.c.b.b.a.a #15 ENSGT01100000263482.C.c.a #16 ENSGT00940000166945.f ##21 ENSGT00530000064879.a.a.b ##31 ENSGT00530000064879.b ##31 ENSGT01100000263482.C.c.b.b.a.b.m.b #19 ENSGT00940000168945 ENSGT00940000166945.e #21 ENSGT00520000060616 ENSGT00390000016675 #22 ENSGT00940000153818.a.b.a.b #23 ENSGT00550000074863 #24 ENSGT00390000010789 #25 ENSGT00940000160675 #26 ENSGT00940000156751.c #27 ENSGT00390000008122 #29 ENSGT00940000156706 #28 ENSGT00390000000288 #30 ENSGT00940000160834 #32 ENSGT00390000018145.xc.e.b ENSGT00390000018761 #33 ENSGT00840000129887 ENSGT00390000009552 #34 ENSGT00390000013520 #35 ENSGT00940000157382 #36 Domestic yak MODERN SPECIES 10 ENSBGRG00000023731 CCL16 (ENSBGRG00000023749) #10 CCL14 (ENSBGRG00000023792) #11 ENSBGRG00000023865 #12 ENSBGRG00000023893 ENSBGRG00000024021 #19 ENSBGRG00000010840 #15 ENSBGRG00000010946 #16 ENSBGRG00000011019 ##21 ENSBGRG00000011113 #31 ENSBGRG00000011179 ENSBGRG00000011198 ##31 ENSBGRG00000011251 #19 ENSBGRG00000011592 ENSBGRG00000012061 HEATR6 (ENSBGRG00000012140) #22 HNF1B (ENSBGRG00000012962) #23 DDX52 (ENSBGRG00000013116) #24 SYNRG (ENSBGRG00000013367) #25 DUSP14 (ENSBGRG00000014496) #26 TADA2A (ENSBGRG00000014519) #27 ACACA (ENSBGRG00000014792) #28 C17orf78 (ENSBGRG00000016417) #29 AATF (ENSBGRG00000016579) #30 LHX1 (ENSBGRG00000016676) #32 ENSBGRG00000016735 MRM1 (ENSBGRG00000016775) #33 ENSBGRG00000016825 DHRS11 (ENSBGRG00000016861) GGNBP2 (ENSBGRG00000016921) #34 ENSBGRG00000017130 Wild yak MODERN SPECIES 133 ENSBMUG00000005914 #21 ENSBMUG00000005878 HEATR6 (ENSBMUG00000005867) #22 HNF1B (ENSBMUG00000005828) #23 DDX52 (ENSBMUG00000005809) #24 SYNRG (ENSBMUG00000005619) #25 DUSP14 (ENSBMUG00000005512) #26 ENSBMUG00000005505 #27 ENSBMUG00000005480 #29 ACACA (ENSBMUG00000005405) #28 ENSBMUG00000005203 #30 American bison MODERN SPECIES 3331 TAF15 (ENSBBBG00000000998) #7 HEATR9 (ENSBBBG00000001077) #8 ENSBBBG00000001120 #9 CCL16 (ENSBBBG00000001142) #10 CCL14 (ENSBBBG00000001153) #11 ENSBBBG00000001168 ENSBBBG00000001180 #13 ENSBBBG00000001231 #15 ENSBBBG00000003679 #16 ENSBBBG00000014876 ##21 ENSBBBG00000014865 ##31 ENSBBBG00000003664 #31 ENSBBBG00000014854 #19 ENSBBBG00000014826 #21 ENSBBBG00000014821 HEATR6 (ENSBBBG00000014812) #22 HNF1B (ENSBBBG00000003591) #23 DDX52 (ENSBBBG00000014718) #24 SYNRG (ENSBBBG00000014660) #25 DUSP14 (ENSBBBG00000003316) #26 TADA2A (ENSBBBG00000003311) #27 ACACA (ENSBBBG00000014359) #28 ENSBBBG00000003150 #29 AATF (ENSBBBG00000003139) #30 LHX1 (ENSBBBG00000003130) #32 ENSBBBG00000014039 #33 DHRS11 (ENSBBBG00000014031) GGNBP2 (ENSBBBG00000003106) #34 PIGW (ENSBBBG00000014009) #35 ENSBBBG00000014006 #36 ZNHIT3 (ENSBBBG00000003083) #37 Siberian musk deer MODERN SPECIES 1135 TAF15 (ENSMMSG00000012333) #7 HEATR9 (ENSMMSG00000012236) #8 ENSMMSG00000012217 #9 ENSMMSG00000012206 #10 ENSMMSG00000012185 #11 ENSMMSG00000012172 ENSMMSG00000012162 #12 ENSMMSG00000012140 ENSMMSG00000012133 #15 ENSMMSG00000012107 #16 ENSMMSG00000012084 #17 ENSMMSG00000012069 ##31 ENSMMSG00000012022 #19 ENSMMSG00000011996 ENSMMSG00000011978 HEATR6 (ENSMMSG00000011926) #22 HNF1B (ENSMMSG00000011774) #23 DDX52 (ENSMMSG00000011723) #24 SYNRG (ENSMMSG00000011008) #25 DUSP14 (ENSMMSG00000010936) #26 ENSMMSG00000010886 #27 ENSMMSG00000010857 #29 ACACA (ENSMMSG00000009380) #28 AATF (ENSMMSG00000009137) #30 LHX1 (ENSMMSG00000009094) #32 MRM1 (ENSMMSG00000009048) #33 DHRS11 (ENSMMSG00000009003) GGNBP2 (ENSMMSG00000008896) #34 PIGW (ENSMMSG00000008870) #35 MYO19 (ENSMMSG00000008719) #36 ZNHIT3 (ENSMMSG00000008678) #37