Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000007247	ENSGT01100000263482.D	ENSGT01100000263482.B	ENSGT01100000263482.C.c.b.a.b.b	ENSGT01100000263482.C.c.b.a.b.a	ENSGT00940000165476	ENSGT01100000263482.C.c.b.b.a.b	ENSGT01100000263482.C.c.a	ENSGT00940000166945	ENSGT00960000187851	ENSGT00520000060616 #21	ENSGT00390000016675 #22	ENSGT00940000153818.a.b.a.b #23	ENSGT00550000074863 #24	ENSGT00390000010789 #25	ENSGT00940000160675 #26	ENSGT00940000156751 #27	ENSGT00390000008122 #28	ENSGT00940000156706 #29	ENSGT00390000000288 #30	ENSGT00940000160834 #31	ENSGT00390000018761 #32	ENSGT00840000129887 #33	ENSGT00390000009552 #34	ENSGT00390000013520 #36	ENSGT00940000157382 #35	ENSGT00390000010822
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000160764	ENSGT01060000250264	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000007247	ENSGT01100000263482.D	ENSGT01100000263482.B	ENSGT01100000263482.C.c.b.a.b.b	ENSGT01100000263482.C.c.b.a.b.a	ENSGT00390000010003.ab	ENSGT01100000263482.C.c.b.b.a.b	ENSGT01100000263482.C.c.a	ENSGT00520000060616 #21	ENSGT00390000016675 #22	ENSGT00940000153818.a.b.a.b #23	ENSGT00550000074863 #24	ENSGT00390000010789 #25	ENSGT00940000160675 #26	ENSGT00940000156751 #27	ENSGT00390000008122 #28	ENSGT00940000156706 #29	ENSGT00390000000288 #30	ENSGT00940000160834 #31	ENSGT00390000018761 #32	ENSGT00840000129887 #33	ENSGT00390000009552 #34	ENSGT00390000013520 #36	ENSGT00940000157382 #35	ENSGT00390000010822
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000160764	ENSGT01060000250264	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000007247	ENSGT01100000263482.D	ENSGT01100000263482.B	ENSGT01100000263482.C.c.b.a.b.b	ENSGT01100000263482.C.c.b.a.b.a	ENSGT00390000010003.ab	ENSGT01100000263482.C.c.b.b.a.b	ENSGT01100000263482.C.c.a	ENSGT00520000060616 #21	ENSGT00390000016675 #22	ENSGT00940000153818.a.b.a.b #23	ENSGT00550000074863 #24	ENSGT00390000010789 #25	ENSGT00940000160675 #26	ENSGT00940000156751 #27	ENSGT00390000008122 #28	ENSGT00940000156706 #29	ENSGT00390000000288 #30	ENSGT00940000160834 #31	ENSGT00390000018761 #32	ENSGT00840000129887 #33	ENSGT00390000009552 #34	ENSGT00390000013520 #36	ENSGT00940000157382 #35	ENSGT00390000010822
Arctic ground squirrel	MODERN SPECIES	193															ENSUPAG00010012127 #21	HEATR6 (ENSUPAG00010012102) #22	HNF1B (ENSUPAG00010012073) #23	DDX52 (ENSUPAG00010012034) #24	SYNRG (ENSUPAG00010011623) #25	DUSP14 (ENSUPAG00010011617) #26	TADA2A (ENSUPAG00010011582) #27	C17orf78 (ENSUPAG00010011568) #28	ACACA (ENSUPAG00010011440) #29	AATF (ENSUPAG00010011404) #30	LHX1 (ENSUPAG00010011394) #31	MRM1 (ENSUPAG00010011380) #32	DHRS11 (ENSUPAG00010011375) #33	GGNBP2 (ENSUPAG00010011289) #34	MYO19 (ENSUPAG00010011260) #35	ENSUPAG00010011238 #36	CA4 (ENSUPAG00010011234) #37
Squirrel	MODERN SPECIES	90	AP2B1 (ENSSTOG00000002031)	RASL10B (ENSSTOG00000021097)	ENSSTOG00000032802	C17orf50 (ENSSTOG00000029437)	MMP28 (ENSSTOG00000020743)	TAF15 (ENSSTOG00000002081)	HEATR9 (ENSSTOG00000028751)	ENSSTOG00000015833	CCL14 (ENSSTOG00000033490)	ENSSTOG00000034887	ENSSTOG00000027899	ENSSTOG00000031610	ENSSTOG00000027458	ENSSTOG00000013313	ENSSTOG00000032858 #21	HEATR6 (ENSSTOG00000026901) #22	HNF1B (ENSSTOG00000012440) #23	DDX52 (ENSSTOG00000002550) #24	SYNRG (ENSSTOG00000002530) #25	DUSP14 (ENSSTOG00000002528) #26	TADA2A (ENSSTOG00000002518) #27	ACACA (ENSSTOG00000002468) #29	C17orf78 (ENSSTOG00000002508) #28	AATF (ENSSTOG00000002458) #30	LHX1 (ENSSTOG00000022593) #31	MRM1 (ENSSTOG00000002422) #32	DHRS11 (ENSSTOG00000002410) #33	GGNBP2 (ENSSTOG00000002398) #34	PIGW (ENSSTOG00000034045) #36	MYO19 (ENSSTOG00000013563) #35	ZNHIT3 (ENSSTOG00000013559)
Alpin marmot	MODERN SPECIES	42	ENSMMMG00000019031	CCL16 (ENSMMMG00000019034)	CCL14 (ENSMMMG00000019039)	ENSMMMG00000019047	ENSMMMG00000019053	ENSMMMG00000019056	ENSMMMG00000019060	ENSMMMG00000019088	ENSMMMG00000019090	ENSMMMG00000019093	ENSMMMG00000019105	ENSMMMG00000019116	ENSMMMG00000019119	ENSMMMG00000019125	ENSMMMG00000019129	HEATR6 (ENSMMMG00000019131) #22	HNF1B (ENSMMMG00000019142) #23	ENSMMMG00000019173	ENSMMMG00000019174	DDX52 (ENSMMMG00000019175) #24	SYNRG (ENSMMMG00000019201) #25	DUSP14 (ENSMMMG00000019458) #26	TADA2A (ENSMMMG00000019464) #27	C17orf78 (ENSMMMG00000019471) #28	ACACA (ENSMMMG00000019480) #29	ENSMMMG00000019558	LHX1 (ENSMMMG00000019565) #31	MRM1 (ENSMMMG00000019574) #32	DHRS11 (ENSMMMG00000019586) #33	GGNBP2 (ENSMMMG00000019594) #34	PIGW (ENSMMMG00000019680) #36
Eurasian red squirrel	MODERN SPECIES	12	GAS2L2 (ENSSVLG00005010308)	C17orf50 (ENSSVLG00005010248)	MMP28 (ENSSVLG00005010157)	TAF15 (ENSSVLG00005010110)	HEATR9 (ENSSVLG00005009904)	ENSSVLG00005009862	CCL16 (ENSSVLG00005009830)	CCL14 (ENSSVLG00005009782)	ENSSVLG00005009747	ENSSVLG00005009720	ENSSVLG00005009611	ENSSVLG00005009573	ENSSVLG00005009477	ENSSVLG00005009438	ENSSVLG00005009414 #21	HEATR6 (ENSSVLG00005009203) #22	HNF1B (ENSSVLG00005008984) #23	DDX52 (ENSSVLG00005008941) #24	SYNRG (ENSSVLG00005008671) #25	ENSSVLG00005008610	TADA2A (ENSSVLG00005008528) #27	ENSSVLG00005008508	ENSSVLG00005008470 #28	ACACA (ENSSVLG00005008078) #29	AATF (ENSSVLG00005008003) #30	LHX1 (ENSSVLG00005007965) #31	MRM1 (ENSSVLG00005007932) #32	DHRS11 (ENSSVLG00005007894) #33	GGNBP2 (ENSSVLG00005007850) #34	PIGW (ENSSVLG00005007830) #36	ENSSVLG00005007764 #35