Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b #22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b #22 Euteleostomi ANCESTRAL SPECIES 5 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245 #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Sarcopterygii ANCESTRAL SPECIES 23 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245 #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT01020000230346.C ENSGT00390000005524 ENSGT00950000182980.a.a ##22 ENSGT00940000158474 ENSGT00940000156886.D ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00390000018199.a ENSGT00390000008198 ENSGT00390000009196 ENSGT00940000158774 ENSGT00710000106769 ENSGT00390000001830 Tetrapoda ANCESTRAL SPECIES 15 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245 #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Amniota ANCESTRAL SPECIES 12 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Mammalia ANCESTRAL SPECIES 22 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Theria ANCESTRAL SPECIES 13 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Eutheria ANCESTRAL SPECIES 2 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Primates ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Simiiformes ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 17 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00950000183100.C.i.a ##27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 Hominoidea ANCESTRAL SPECIES 18 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000.e #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00950000183100.C.i.a ##27 ENSGT00390000016617.e #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 Hominidae ANCESTRAL SPECIES 19 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000.e #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.e #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000.e #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.e #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Gorilla DUPLICATION Gorilla MODERN SPECIES 14 ERLEC1 (ENSGGOG00000000544) #7 ASB3 (ENSGGOG00000000538) #8 CHAC2 (ENSGGOG00000039185) #9 NRXN1 (ENSGGOG00000038758) #10 ENSGGOG00000036155 #11 FSHR (ENSGGOG00000014436) #12 LHCGR (ENSGGOG00000008461) #13 ENSGGOG00000012507 #14 PPP1R21 (ENSGGOG00000016362) #15 FOXN2 (ENSGGOG00000037794) #16 FBXO11 (ENSGGOG00000011606) #17 MSH6 (ENSGGOG00000021987) #18 KCNK12 (ENSGGOG00000042739) #19 MSH2 (ENSGGOG00000007088) #20 EPCAM (ENSGGOG00000022888) #21 CALM1 (ENSGGOG00000002521) #22 STPG4 (ENSGGOG00000002525) #23 TTC7A (ENSGGOG00000009310) #24 MCFD2 (ENSGGOG00000012267) #25 SOCS5 (ENSGGOG00000008234) #26 CRIPT (ENSGGOG00000015059) #27 PIGF (ENSGGOG00000024478) #28 RHOQ (ENSGGOG00000023494) #29 ATP6V1E2 (ENSGGOG00000011550) #30 TMEM247 (ENSGGOG00000007139) #31 PRKCE (ENSGGOG00000011965) #32 SRBD1 (ENSGGOG00000005910) #33 SIX2 (ENSGGOG00000008605) #34 ENSGGOG00000037046 #35 CAMKMT (ENSGGOG00000044220) #36 PREPL (ENSGGOG00000007235) #37 Gorilla MODERN SPECIES 4 ITGBL1 (ENSGGOG00000006808) NALCN (ENSGGOG00000007476) TMTC4 (ENSGGOG00000012544) GGACT (ENSGGOG00000042915) PCCA (ENSGGOG00000012516) ZIC2 (ENSGGOG00000006512) ENSGGOG00000022385 CLYBL (ENSGGOG00000006508) TM9SF2 (ENSGGOG00000008344) GPR183 (ENSGGOG00000000721) GPR18 (ENSGGOG00000015697) ENSGGOG00000027760 UBAC2 (ENSGGOG00000034999) DOCK9 (ENSGGOG00000014914) SLC15A1 (ENSGGOG00000014903) ENSGGOG00000026813 ##22 STK24 (ENSGGOG00000001983) FARP1 (ENSGGOG00000004930) RNF113B (ENSGGOG00000023052) IPO5 (ENSGGOG00000008742) RAP2A (ENSGGOG00000039196) MBNL2 (ENSGGOG00000008349) ENSGGOG00000041513 ENSGGOG00000036222 ENSGGOG00000022541 UGGT2 (ENSGGOG00000010803) DNAJC3 (ENSGGOG00000001314) DZIP1 (ENSGGOG00000016859) CLDN10 (ENSGGOG00000027541) ABCC4 (ENSGGOG00000004265) SOX21 (ENSGGOG00000003177) Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000.e #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.e #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Pan ANCESTRAL SPECIES 17 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00950000182878.b.a.c.a.a.b.i.a ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000.e #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.e #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Bonobo MODERN SPECIES 14 CHAC2 (ENSPPAG00000028207) #9 ASB3 (ENSPPAG00000037721) #8 NRXN1 (ENSPPAG00000040015) #10 ENSPPAG00000019705 FSHR (ENSPPAG00000032263) #12 LHCGR (ENSPPAG00000031995) #13 ENSPPAG00000026437 #14 PPP1R21 (ENSPPAG00000030784) #15 FOXN2 (ENSPPAG00000037048) #16 FBXO11 (ENSPPAG00000033090) #17 MSH6 (ENSPPAG00000041533) #18 ENSPPAG00000036758 ENSPPAG00000001152 MSH2 (ENSPPAG00000034124) #20 EPCAM (ENSPPAG00000029030) #21 ENSPPAG00000030799 #22 STPG4 (ENSPPAG00000029033) #23 TTC7A (ENSPPAG00000035331) #24 MCFD2 (ENSPPAG00000025149) #25 SOCS5 (ENSPPAG00000001351) #26 CRIPT (ENSPPAG00000027464) #27 PIGF (ENSPPAG00000042570) #28 ENSPPAG00000039488 #29 ATP6V1E2 (ENSPPAG00000033113) #30 TMEM247 (ENSPPAG00000037594) #31 EPAS1 (ENSPPAG00000036429) PRKCE (ENSPPAG00000032966) #32 SRBD1 (ENSPPAG00000038442) #33 SIX2 (ENSPPAG00000040393) #34 ENSPPAG00000028854 #35 CAMKMT (ENSPPAG00000030930) #36 Chimpanzee MODERN SPECIES 14 ASB3 (ENSPTRG00000011916) #8 NRXN1 (ENSPTRG00000047199) #10 ENSPTRG00000044663 FSHR (ENSPTRG00000011914) #12 LHCGR (ENSPTRG00000011912) #13 STON1 (ENSPTRG00000011911) #14 PPP1R21 (ENSPTRG00000011910) #15 FOXN2 (ENSPTRG00000011908) #16 FBXO11 (ENSPTRG00000011907) #17 MSH6 (ENSPTRG00000011906) #18 ENSPTRG00000040206 ENSPTRG00000045070 KCNK12 (ENSPTRG00000044458) #19 MSH2 (ENSPTRG00000050712) #20 EPCAM (ENSPTRG00000011902) #21 CALM2 (ENSPTRG00000011901) #22 STPG4 (ENSPTRG00000011900) #23 TTC7A (ENSPTRG00000011899) #24 MCFD2 (ENSPTRG00000011898) #25 SOCS5 (ENSPTRG00000040283) #26 CRIPT (ENSPTRG00000011896) ##27 PIGF (ENSPTRG00000011895) #28 RHOQ (ENSPTRG00000044328) #29 ATP6V1E2 (ENSPTRG00000011893) #30 TMEM247 (ENSPTRG00000011892) #31 EPAS1 (ENSPTRG00000011891) PRKCE (ENSPTRG00000011890) #32 SRBD1 (ENSPTRG00000011889) #33 SIX2 (ENSPTRG00000011888) #34 ENSPTRG00000043329 SIX3 (ENSPTRG00000011887) #35 Orangutan MODERN SPECIES 14 ERLEC1 (ENSPPYG00000033647) #7 ASB3 (ENSPPYG00000012415) #8 CHAC2 (ENSPPYG00000012416) #9 NRXN1 (ENSPPYG00000012417) #10 FSHR (ENSPPYG00000012418) #12 LHCGR (ENSPPYG00000012419) #13 GTF2A1L (ENSPPYG00000033807) STON1 (ENSPPYG00000012420) #14 PPP1R21 (ENSPPYG00000012422) #15 FOXN2 (ENSPPYG00000032110) #16 FBXO11 (ENSPPYG00000012424) #17 MSH6 (ENSPPYG00000012425) #18 KCNK12 (ENSPPYG00000012427) #19 MSH2 (ENSPPYG00000012428) #20 EPCAM (ENSPPYG00000012429) #21 CALM2 (ENSPPYG00000012430) #22 STPG4 (ENSPPYG00000012431) #23 TTC7A (ENSPPYG00000012432) #24 MCFD2 (ENSPPYG00000036629) #25 SOCS5 (ENSPPYG00000038069) #26 CRIPT (ENSPPYG00000030961) #27 PIGF (ENSPPYG00000035818) #28 RHOQ (ENSPPYG00000012439) #29 ATP6V1E2 (ENSPPYG00000012440) #30 TMEM247 (ENSPPYG00000012441) #31 EPAS1 (ENSPPYG00000012442) PRKCE (ENSPPYG00000012443) #32 SRBD1 (ENSPPYG00000012444) #33 SIX2 (ENSPPYG00000012446) #34 SIX3 (ENSPPYG00000041063) #35 CAMKMT (ENSPPYG00000012448) #36 Gibbon MODERN SPECIES 9 SEBOX (ENSNLEG00000002123) TMEM199 (ENSNLEG00000002092) POLDIP2 (ENSNLEG00000028130) TNFAIP1 (ENSNLEG00000001911) ENSNLEG00000027167 TMEM97 (ENSNLEG00000033780) NLK (ENSNLEG00000001789) ENSNLEG00000001785 ENSNLEG00000001761 NOS2 (ENSNLEG00000001492) ENSNLEG00000001484 KSR1 (ENSNLEG00000028795) ENSNLEG00000030278 WSB1 (ENSNLEG00000001367) ENSNLEG00000035859 ENSNLEG00000016954 #22 STPG4 (ENSNLEG00000016950) #23 ENSNLEG00000016940 #24 MCFD2 (ENSNLEG00000016937) #25 SOCS5 (ENSNLEG00000034453) #26 CRIPT (ENSNLEG00000016929) #27 PIGF (ENSNLEG00000030146) #28 ENSNLEG00000028640 RHOQ (ENSNLEG00000016922) #29 EPAS1 (ENSNLEG00000016906) PRKCE (ENSNLEG00000016892) #32 SRBD1 (ENSNLEG00000016877) #33 SIX2 (ENSNLEG00000016872) #34 ENSNLEG00000031277 CAMKMT (ENSNLEG00000016864) #36 PREPL (ENSNLEG00000016853) #37 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.r #22 Rhinopithecus ANCESTRAL SPECIES 149 ENSGT00910000148206 ENSGT00940000157364.C #13 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118.f #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.r #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00940000154930 ENSGT00940000154499.h ENSGT00390000017970 ENSGT00390000008296.b.a.a.g ENSGT00940000163110 ENSGT00390000005185 ENSGT00940000162767 ENSGT00390000011483 ENSGT00390000009531 Golden snub-nosed monkey MODERN SPECIES 1145 FBXO11 (ENSRROG00000044862) #17 MSH6 (ENSRROG00000034827) #18 ENSRROG00000034141 KCNK12 (ENSRROG00000044464) #19 MSH2 (ENSRROG00000002126) #20 EPCAM (ENSRROG00000005977) #21 ENSRROG00000012737 ENSRROG00000033589 #22 STPG4 (ENSRROG00000032949) #23 ENSRROG00000043038 TTC7A (ENSRROG00000029928) #24 MCFD2 (ENSRROG00000032954) #25 SOCS5 (ENSRROG00000011752) #26 CRIPT (ENSRROG00000039659) #27 PIGF (ENSRROG00000043302) #28 RHOQ (ENSRROG00000042208) #29 ATP6V1E2 (ENSRROG00000014680) #30 TMEM247 (ENSRROG00000028710) #31 EPAS1 (ENSRROG00000040968) PRKCE (ENSRROG00000029195) #32 SRBD1 (ENSRROG00000041599) #33 Black snub-nosed monkey MODERN SPECIES 1375 KCNK12 (ENSRBIG00000036058) #19 MSH2 (ENSRBIG00000031403) #20 EPCAM (ENSRBIG00000042447) #21 ENSRBIG00000033764 #22 STPG4 (ENSRBIG00000014563) #23 TTC7A (ENSRBIG00000043771) #24 CACTIN (ENSRBIG00000006919) TBXA2R (ENSRBIG00000036411) GIPC3 (ENSRBIG00000038552) HMG20B (ENSRBIG00000041734) MFSD12 (ENSRBIG00000017416) TEKTIP1 (ENSRBIG00000028614) FZR1 (ENSRBIG00000040539) DOHH (ENSRBIG00000039236) SMIM44 (ENSRBIG00000033666) SMIM24 (ENSRBIG00000033962) NFIC (ENSRBIG00000040502) ENSRBIG00000038502 NCLN (ENSRBIG00000040050) Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.a ##22 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Vervet Monkey MODERN SPECIES 5 ASB3 (ENSCSAG00000013775) #8 NRXN1 (ENSCSAG00000013726) #10 ENSCSAG00000013718 #10 FSHR (ENSCSAG00000013713) #12 LHCGR (ENSCSAG00000013697) #13 GTF2A1L (ENSCSAG00000013639) STON1 (ENSCSAG00000013632) #14 ENSCSAG00000013624 PPP1R21 (ENSCSAG00000013613) #15 FOXN2 (ENSCSAG00000013601) #16 FBXO11 (ENSCSAG00000013597) #17 MSH6 (ENSCSAG00000013583) #18 KCNK12 (ENSCSAG00000013576) #19 MSH2 (ENSCSAG00000013571) #20 EPCAM (ENSCSAG00000013561) #21 CALM2 (ENSCSAG00000013552) ##22 STPG4 (ENSCSAG00000013545) #23 TTC7A (ENSCSAG00000013538) #24 MCFD2 (ENSCSAG00000013524) #25 ENSCSAG00000013517 SOCS5 (ENSCSAG00000019452) #26 PIGF (ENSCSAG00000013510) #28 RHOQ (ENSCSAG00000013504) #29 ATP6V1E2 (ENSCSAG00000019453) #30 TMEM247 (ENSCSAG00000013492) #31 EPAS1 (ENSCSAG00000013481) PRKCE (ENSCSAG00000013435) #32 SRBD1 (ENSCSAG00000013350) #33 SIX2 (ENSCSAG00000013339) #34 SIX3 (ENSCSAG00000013334) #35 CAMKMT (ENSCSAG00000013325) #36 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000158952 #12 ENSGT00910000148206 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Macaca ANCESTRAL SPECIES 17 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00910000148206 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00910000148255 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Pig-tailed macaque MODERN SPECIES 341 ENSMNEG00000033897 NRXN1 (ENSMNEG00000004728) #10 FSHR (ENSMNEG00000035866) #12 ENSMNEG00000040960 LHCGR (ENSMNEG00000035625) #13 STON1 (ENSMNEG00000034762) #14 PPP1R21 (ENSMNEG00000033788) #15 ENSMNEG00000023674 FOXN2 (ENSMNEG00000044769) #16 FBXO11 (ENSMNEG00000029583) #17 MSH6 (ENSMNEG00000039742) #18 ENSMNEG00000008190 KCNK12 (ENSMNEG00000008106) #19 MSH2 (ENSMNEG00000036444) #20 EPCAM (ENSMNEG00000032326) #21 CALM2 (ENSMNEG00000036829) ##22 ENSMNEG00000027057 STPG4 (ENSMNEG00000045124) #23 TTC7A (ENSMNEG00000020883) #24 MCFD2 (ENSMNEG00000032272) #25 SOCS5 (ENSMNEG00000011264) #26 CRIPT (ENSMNEG00000032455) #27 ENSMNEG00000011697 PIGF (ENSMNEG00000038833) #28 RHOQ (ENSMNEG00000039078) #29 ATP6V1E2 (ENSMNEG00000024749) #30 TMEM247 (ENSMNEG00000039915) #31 EPAS1 (ENSMNEG00000009552) PRKCE (ENSMNEG00000032412) #32 SRBD1 (ENSMNEG00000034701) #33 SIX2 (ENSMNEG00000026299) #34 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000159080 #8 ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.b.a ENSGT00940000161627.a.a.a.b.b.b.b.a.a.a.a.a.a.a.b.b.a.a.a.b.a.b ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000154141.B.bb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000057488 GTF2A1L (ENSMFAG00000003441) STON1 (ENSMFAG00000058922) #14 PPP1R21 (ENSMFAG00000032105) #15 FOXN2 (ENSMFAG00000041347) #16 ENSMFAG00000048932 FBXO11 (ENSMFAG00000030637) #17 ENSMFAG00000048255 ENSMFAG00000050144 ENSMFAG00000054762 MSH6 (ENSMFAG00000041012) #18 ENSMFAG00000053816 KCNK12 (ENSMFAG00000060684) #19 MSH2 (ENSMFAG00000001635) #20 EPCAM (ENSMFAG00000003661) #21 CALM2 (ENSMFAG00000003711) ##22 STPG4 (ENSMFAG00000028787) #23 TTC7A (ENSMFAG00000040123) #24 MCFD2 (ENSMFAG00000061552) #25 ENSMFAG00000051502 ENSMFAG00000050996 SOCS5 (ENSMFAG00000030827) #26 ENSMFAG00000037609 #27 PIGF (ENSMFAG00000043629) #28 RHOQ (ENSMFAG00000054514) #29 TMEM247 (ENSMFAG00000002875) #31 EPAS1 (ENSMFAG00000004035) PRKCE (ENSMFAG00000003236) #32 SRBD1 (ENSMFAG00000042026) #33 SIX2 (ENSMFAG00000056852) #34 SIX3 (ENSMFAG00000059333) #35 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00910000148206 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00910000144347.w.b.a.b ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Olive baboon MODERN SPECIES 5 GTF2A1L (ENSPANG00000048288) STON1 (ENSPANG00000025377) #14 PPP1R21 (ENSPANG00000019616) #15 SERF2 (ENSPANG00000030418) FOXN2 (ENSPANG00000013263) #16 ENSPANG00000046108 ENSPANG00000046063 ENSPANG00000047197 FBXO11 (ENSPANG00000019148) #17 MSH6 (ENSPANG00000019107) #18 KCNK12 (ENSPANG00000007920) #19 MSH2 (ENSPANG00000016953) #20 EPCAM (ENSPANG00000021192) #21 ENSPANG00000046172 ENSPANG00000040123 CALM2 (ENSPANG00000030529) ##22 STPG4 (ENSPANG00000009442) #23 TTC7A (ENSPANG00000022915) #24 MCFD2 (ENSPANG00000023116) #25 ENSPANG00000014669 #26 CRIPT (ENSPANG00000035883) #27 PIGF (ENSPANG00000007921) #28 RHOQ (ENSPANG00000022553) #29 ATP6V1E2 (ENSPANG00000005031) #30 TMEM247 (ENSPANG00000024445) #31 ENSPANG00000040402 EPAS1 (ENSPANG00000013264) PRKCE (ENSPANG00000050999) #32 SRBD1 (ENSPANG00000008063) #33 SIX2 (ENSPANG00000022339) #34 ENSPANG00000048211 Cercopithecinae_d ANCESTRAL SPECIES 79 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00910000148206 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00910000144347.w.b.a.b ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.q.a ##22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.cb #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Sooty mangabey MODERN SPECIES 161 NRXN1 (ENSCATG00000028673) #10 FSHR (ENSCATG00000036507) #12 ENSCATG00000003181 LHCGR (ENSCATG00000039941) #13 STON1 (ENSCATG00000000431) #14 PPP1R21 (ENSCATG00000031248) #15 FOXN2 (ENSCATG00000016283) #16 FBXO11 (ENSCATG00000009908) #17 ENSCATG00000035720 #18 ENSCATG00000035297 KCNK12 (ENSCATG00000039034) #19 MSH2 (ENSCATG00000040981) #20 EPCAM (ENSCATG00000015834) #21 CALM2 (ENSCATG00000033791) ##22 STPG4 (ENSCATG00000032856) #23 TTC7A (ENSCATG00000040563) #24 MCFD2 (ENSCATG00000026050) #25 SOCS5 (ENSCATG00000018703) #26 CRIPT (ENSCATG00000030782) #27 PIGF (ENSCATG00000016440) #28 RHOQ (ENSCATG00000034599) #29 ATP6V1E2 (ENSCATG00000014793) #30 TMEM247 (ENSCATG00000038678) #31 EPAS1 (ENSCATG00000041291) PRKCE (ENSCATG00000040854) #32 SRBD1 (ENSCATG00000039530) #33 SIX2 (ENSCATG00000009970) #34 SIX3 (ENSCATG00000034034) #35 CAMKMT (ENSCATG00000037117) #36 Drill MODERN SPECIES 1470 CALM2 (ENSMLEG00000033915) ##22 STPG4 (ENSMLEG00000039191) #23 TTC7A (ENSMLEG00000038346) #24 MCFD2 (ENSMLEG00000032033) #25 SOCS5 (ENSMLEG00000027710) #26 CRIPT (ENSMLEG00000042269) #27 PIGF (ENSMLEG00000004854) #28 RHOQ (ENSMLEG00000042726) #29 ATP6V1E2 (ENSMLEG00000024544) #30 TMEM247 (ENSMLEG00000038615) #31 EPAS1 (ENSMLEG00000037975) PRKCE (ENSMLEG00000031987) #32 Hominoidea ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.a ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.a ##22 Human MODERN SPECIES 11 CHAC2 (ENSG00000143942) #9 ASB3 (ENSG00000115239) #8 NRXN1 (ENSG00000179915) #10 FSHR (ENSG00000170820) #12 LHCGR (ENSG00000138039) #13 GTF2A1L (ENSG00000242441) STON1-GTF2A1L (ENSG00000068781) STON1 (ENSG00000243244) #14 PPP1R21 (ENSG00000162869) #15 FOXN2 (ENSG00000170802) #16 FBXO11 (ENSG00000138081) #17 MSH6 (ENSG00000116062) #18 KCNK12 (ENSG00000184261) #19 MSH2 (ENSG00000095002) #20 EPCAM (ENSG00000119888) #21 CALM2 (ENSG00000143933) ##22 STPG4 (ENSG00000239605) #23 TTC7A (ENSG00000068724) #24 MCFD2 (ENSG00000180398) #25 SOCS5 (ENSG00000171150) #26 CRIPT (ENSG00000119878) #27 PIGF (ENSG00000151665) #28 RHOQ (ENSG00000119729) #29 ATP6V1E2 (ENSG00000250565) #30 TMEM247 (ENSG00000284701) #31 EPAS1 (ENSG00000116016) PRKCE (ENSG00000171132) #32 SRBD1 (ENSG00000068784) #33 SIX2 (ENSG00000170577) #34 SIX3 (ENSG00000138083) #35 CAMKMT (ENSG00000143919) #36 Catarrhini ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b ##22 Gorilla MODERN SPECIES 1 SRGN (ENSGGOG00000003319) ENSGGOG00000010433 SUPV3L1 (ENSGGOG00000005325) HKDC1 (ENSGGOG00000012384) TACR2 (ENSGGOG00000015935) HK1 (ENSGGOG00000036737) ENSGGOG00000011980 TSPAN15 (ENSGGOG00000007780) NEUROG3 (ENSGGOG00000036451) FAM241B (ENSGGOG00000002190) COL13A1 (ENSGGOG00000005032) MACROH2A2 (ENSGGOG00000005947) AIFM2 (ENSGGOG00000005951) TYSND1 (ENSGGOG00000016639) SAR1A (ENSGGOG00000024879) ENSGGOG00000037832 ##22 PPA1 (ENSGGOG00000016995) NPFFR1 (ENSGGOG00000014103) LRRC20 (ENSGGOG00000014113) ENSGGOG00000042114 EIF4EBP2 (ENSGGOG00000036271) NODAL (ENSGGOG00000002581) PALD1 (ENSGGOG00000004747) PRF1 (ENSGGOG00000001909) ADAMTS14 (ENSGGOG00000012358) TBATA (ENSGGOG00000012387) SGPL1 (ENSGGOG00000016655) PCBD1 (ENSGGOG00000013985) UNC5B (ENSGGOG00000011623) SLC29A3 (ENSGGOG00000000803) C10orf105 (ENSGGOG00000037482) Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000159991.A ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00910000147505 ENSGT00940000154297.A ENSGT00940000162596 ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 Rhinopithecus ANCESTRAL SPECIES 42 ENSGT00940000159815 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00940000159057 ENSGT00910000147505 ENSGT00940000154297.A ENSGT00940000162596 ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 Golden snub-nosed monkey MODERN SPECIES 2365 RPS6KL1 (ENSRROG00000033229) PGF (ENSRROG00000034324) EIF2B2 (ENSRROG00000042761) MLH3 (ENSRROG00000029699) ENSRROG00000037333 ZC2HC1C (ENSRROG00000045324) NEK9 (ENSRROG00000011665) TMED10 (ENSRROG00000034110) FOS (ENSRROG00000038425) JDP2 (ENSRROG00000000567) ENSRROG00000034062 BATF (ENSRROG00000041232) FLVCR2 (ENSRROG00000042695) ERG28 (ENSRROG00000043806) TTLL5 (ENSRROG00000038675) ENSRROG00000037942 ##22 TGFB3 (ENSRROG00000005123) IFT43 (ENSRROG00000036349) GPATCH2L (ENSRROG00000031820) ESRRB (ENSRROG00000034057) VASH1 (ENSRROG00000034214) ANGEL1 (ENSRROG00000037388) ENSRROG00000035038 LRRC74A (ENSRROG00000043657) CIPC (ENSRROG00000041673) ZDHHC22 (ENSRROG00000030738) TMEM63C (ENSRROG00000044742) NGB (ENSRROG00000044996) POMT2 (ENSRROG00000027733) GSTZ1 (ENSRROG00000039665) TMED8 (ENSRROG00000042183) Black snub-nosed monkey MODERN SPECIES 656 RPS6KL1 (ENSRBIG00000040806) PGF (ENSRBIG00000031738) EIF2B2 (ENSRBIG00000040243) MLH3 (ENSRBIG00000031546) ENSRBIG00000028316 ZC2HC1C (ENSRBIG00000029182) NEK9 (ENSRBIG00000032887) TMED10 (ENSRBIG00000042626) FOS (ENSRBIG00000036327) JDP2 (ENSRBIG00000030082) ENSRBIG00000036437 BATF (ENSRBIG00000038010) FLVCR2 (ENSRBIG00000038928) ERG28 (ENSRBIG00000029268) TTLL5 (ENSRBIG00000044481) ENSRBIG00000033309 ##22 TGFB3 (ENSRBIG00000037115) IFT43 (ENSRBIG00000043094) GPATCH2L (ENSRBIG00000031287) ESRRB (ENSRBIG00000027867) VASH1 (ENSRBIG00000041261) ANGEL1 (ENSRBIG00000027844) ENSRBIG00000042798 LRRC74A (ENSRBIG00000031026) IRF2BPL (ENSRBIG00000034968) CIPC (ENSRBIG00000035374) ZDHHC22 (ENSRBIG00000038054) TMEM63C (ENSRBIG00000041778) NGB (ENSRBIG00000038926) POMT2 (ENSRBIG00000031307) GSTZ1 (ENSRBIG00000037998) Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000159991.A ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00940000154297.A ENSGT00940000162596 ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000159815 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00940000154297.A ENSGT00940000162596 ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 Macaca DUPLICATION Macaca ANCESTRAL SPECIES 1 ENSGT00940000159815 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b.a ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00940000154297.A ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 ENSGT00530000063651.b Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000167556.b.b.a.b.a.a.a.b.a.b.a.a.a.a ENSGT00940000159276 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.a.b.a.a.a ENSGT00940000155693 ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b.a ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00940000159057 ENSGT00940000154297.A ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.a.b.a.a.a ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 ENSGT00530000063651.b Crab-eating macaque MODERN SPECIES 17 EIF2B2 (ENSMFAG00000043749) MLH3 (ENSMFAG00000043843) ENSMFAG00000030959 ZC2HC1C (ENSMFAG00000013902) NEK9 (ENSMFAG00000037572) TMED10 (ENSMFAG00000031081) ENSMFAG00000050715 FOS (ENSMFAG00000014606) ENSMFAG00000061921 JDP2 (ENSMFAG00000033637) BATF (ENSMFAG00000031172) FLVCR2 (ENSMFAG00000039606) ENSMFAG00000053687 ERG28 (ENSMFAG00000000605) TTLL5 (ENSMFAG00000029801) ENSMFAG00000039878 ##22 ENSMFAG00000056633 TGFB3 (ENSMFAG00000024879) IFT43 (ENSMFAG00000033645) GPATCH2L (ENSMFAG00000039835) ESRRB (ENSMFAG00000000926) ENSMFAG00000011451 VASH1 (ENSMFAG00000032260) ANGEL1 (ENSMFAG00000045195) LRRC74A (ENSMFAG00000046151) ENSMFAG00000059936 CIPC (ENSMFAG00000035500) TMEM63C (ENSMFAG00000003447) ZDHHC22 (ENSMFAG00000061033) NGB (ENSMFAG00000061162) POMT2 (ENSMFAG00000043819) Pig-tailed macaque MODERN SPECIES 225 DLST (ENSMNEG00000035472) RPS6KL1 (ENSMNEG00000043637) PGF (ENSMNEG00000030055) EIF2B2 (ENSMNEG00000034034) MLH3 (ENSMNEG00000032615) ENSMNEG00000041248 ZC2HC1C (ENSMNEG00000044895) NEK9 (ENSMNEG00000038107) TMED10 (ENSMNEG00000027961) FOS (ENSMNEG00000031655) JDP2 (ENSMNEG00000044862) ENSMNEG00000033927 BATF (ENSMNEG00000028812) ERG28 (ENSMNEG00000004663) FLVCR2 (ENSMNEG00000041899) ENSMNEG00000032194 ##22 TTLL5 (ENSMNEG00000037856) TGFB3 (ENSMNEG00000043550) IFT43 (ENSMNEG00000043689) Macaca ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b.b ##22 Macaca_a ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.q.b.b ##22 Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000044932 PHKG1 (ENSMFAG00000045222) ENSMFAG00000056343 ENSMFAG00000054697 ENSMFAG00000057644 ENSMFAG00000058267 ENSMFAG00000041219 ENSMFAG00000061842 LANCL2 (ENSMFAG00000045262) EGFR (ENSMFAG00000034444) ENSMFAG00000065149 SEC61G (ENSMFAG00000039470) VSTM2A (ENSMFAG00000038380) ENSMFAG00000063850 ENSMFAG00000060289 ENSMFAG00000024195 ##22 COBL (ENSMFAG00000035434) GRB10 (ENSMFAG00000002619) DDC (ENSMFAG00000025021) ENSMFAG00000060636 FIGNL1 (ENSMFAG00000063787) ENSMFAG00000063963 SPATA48 (ENSMFAG00000045999) ZPBP (ENSMFAG00000042535) VWC2 (ENSMFAG00000051675) ENSMFAG00000037443 ENSMFAG00000046111 ENSMFAG00000056019 ENSMFAG00000033052 CDC14C (ENSMFAG00000001266) ENSMFAG00000056315 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00940000159815 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00940000154297.A ENSGT00940000162596 ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 Cercopithecinae_d ANCESTRAL SPECIES 11 ENSGT00940000159815 ENSGT00940000160164 ENSGT00550000074908 ENSGT00800000124176 ENSGT00390000011103.B.i ENSGT00940000160947 ENSGT00940000156145 ENSGT00550000074954.bb ENSGT00940000159276 ENSGT00940000155693 ENSGT00940000153883.a.a ENSGT00940000159745 ENSGT01030000234625.B.d ENSGT00390000010925 ENSGT00940000162939 ENSGT00950000182980.a.b.b.b.q.b ##22 ENSGT00940000155747 ENSGT00390000012060 ENSGT00410000025698.b ENSGT00940000153433.A ENSGT00390000012703.b ENSGT00910000147449 ENSGT00940000159057 ENSGT00940000154297.A ENSGT00510000048522 ENSGT00730000111268 ENSGT00940000159072 ENSGT00510000048375 ENSGT00940000156829 ENSGT00390000006580 ENSGT00530000063651.b Drill MODERN SPECIES 827 RPS6KL1 (ENSMLEG00000037049) PGF (ENSMLEG00000028938) EIF2B2 (ENSMLEG00000041601) MLH3 (ENSMLEG00000009239) ENSMLEG00000033619 ZC2HC1C (ENSMLEG00000040598) NEK9 (ENSMLEG00000038474) TMED10 (ENSMLEG00000038447) FOS (ENSMLEG00000040559) JDP2 (ENSMLEG00000038051) ENSMLEG00000041625 BATF (ENSMLEG00000033193) FLVCR2 (ENSMLEG00000042003) ERG28 (ENSMLEG00000034213) TTLL5 (ENSMLEG00000033082) ENSMLEG00000016058 ##22 TGFB3 (ENSMLEG00000040102) IFT43 (ENSMLEG00000042350) GPATCH2L (ENSMLEG00000010264) Sooty mangabey MODERN SPECIES 165 RPS6KL1 (ENSCATG00000030155) PGF (ENSCATG00000021773) EIF2B2 (ENSCATG00000044945) MLH3 (ENSCATG00000037886) ENSCATG00000044270 ZC2HC1C (ENSCATG00000039242) NEK9 (ENSCATG00000037694) TMED10 (ENSCATG00000031220) FOS (ENSCATG00000044925) JDP2 (ENSCATG00000041724) ENSCATG00000031624 BATF (ENSCATG00000032310) FLVCR2 (ENSCATG00000001690) ERG28 (ENSCATG00000027251) TTLL5 (ENSCATG00000039057) ENSCATG00000039187 ##22 TGFB3 (ENSCATG00000024787) IFT43 (ENSCATG00000043000) GPATCH2L (ENSCATG00000044894) ESRRB (ENSCATG00000030999) VASH1 (ENSCATG00000019896) ENSCATG00000036666 ANGEL1 (ENSCATG00000041296) LRRC74A (ENSCATG00000043880) CIPC (ENSCATG00000032735) ZDHHC22 (ENSCATG00000031139) TMEM63C (ENSCATG00000042839) NGB (ENSCATG00000031640) POMT2 (ENSCATG00000006857) GSTZ1 (ENSCATG00000022787) TMED8 (ENSCATG00000044508) Olive baboon MODERN SPECIES 17 PROX2 (ENSPANG00000024084) DLST (ENSPANG00000024086) RPS6KL1 (ENSPANG00000016739) PGF (ENSPANG00000017556) EIF2B2 (ENSPANG00000006825) MLH3 (ENSPANG00000016738) ENSPANG00000006824 ZC2HC1C (ENSPANG00000045711) NEK9 (ENSPANG00000006981) TMED10 (ENSPANG00000019635) FOS (ENSPANG00000020551) JDP2 (ENSPANG00000019986) BATF (ENSPANG00000021772) ERG28 (ENSPANG00000022559) FLVCR2 (ENSPANG00000017555) ENSPANG00000030981 ##22 TTLL5 (ENSPANG00000021771) TGFB3 (ENSPANG00000020776) IFT43 (ENSPANG00000024302) ENSPANG00000038588 GPATCH2L (ENSPANG00000017554) ESRRB (ENSPANG00000019985) VASH1 (ENSPANG00000020966) ANGEL1 (ENSPANG00000023844) LRRC74A (ENSPANG00000019311) ENSPANG00000047727 IRF2BPL (ENSPANG00000017190) CIPC (ENSPANG00000031695) ZDHHC22 (ENSPANG00000000713) ENSPANG00000038563 TMEM63C (ENSPANG00000021770) Platyrrhini ANCESTRAL SPECIES 13 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000154980.u.b ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00390000003552.ab.b ENSGT00940000160346.B #35 Mas night monkey MODERN SPECIES 745 FBXO11 (ENSANAG00000029710) #17 MSH6 (ENSANAG00000023899) #18 KCNK12 (ENSANAG00000024593) #19 MSH2 (ENSANAG00000024961) #20 EPCAM (ENSANAG00000035267) #21 CALM2 (ENSANAG00000026025) #22 STPG4 (ENSANAG00000023702) #23 TTC7A (ENSANAG00000033688) #24 MCFD2 (ENSANAG00000018572) #25 ENSANAG00000031403 #26 CRIPT (ENSANAG00000029270) #27 PIGF (ENSANAG00000027627) #28 RHOQ (ENSANAG00000027970) #29 TMEM247 (ENSANAG00000029920) #31 Cebidae ANCESTRAL SPECIES 15 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000154980.u.b ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00390000003552.ab.b ENSGT00940000160346.B #35 Marmoset MODERN SPECIES 5 GTF2A1L (ENSCJAG00000041412) ENSCJAG00000081429 STON1 (ENSCJAG00000010678) #14 PPP1R21 (ENSCJAG00000010751) #15 ENSCJAG00000085607 FOXN2 (ENSCJAG00000010894) #16 ENSCJAG00000085256 ENSCJAG00000068888 FBXO11 (ENSCJAG00000010907) #17 MSH6 (ENSCJAG00000011019) #18 KCNK12 (ENSCJAG00000060645) #19 ENSCJAG00000072740 MSH2 (ENSCJAG00000000620) #20 EPCAM (ENSCJAG00000000624) #21 ENSCJAG00000000635 CALM2 (ENSCJAG00000000638) #22 STPG4 (ENSCJAG00000000655) #23 TTC7A (ENSCJAG00000000656) #24 ENSCJAG00000077083 MCFD2 (ENSCJAG00000044202) #25 ENSCJAG00000077795 SOCS5 (ENSCJAG00000042287) #26 CRIPT (ENSCJAG00000043662) #27 PIGF (ENSCJAG00000000680) #28 RHOQ (ENSCJAG00000044422) #29 ATP6V1E2 (ENSCJAG00000002587) #30 TMEM247 (ENSCJAG00000000699) #31 EPAS1 (ENSCJAG00000000700) PRKCE (ENSCJAG00000000724) #32 SRBD1 (ENSCJAG00000000727) #33 ENSCJAG00000071312 Cebidae_a ANCESTRAL SPECIES 38 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00390000003552.ab.b ENSGT00940000160346.B #35 Bolivian squirrel monkey MODERN SPECIES 61 ANAPC1 (ENSSBOG00000026095) ENSSBOG00000030512 BCL2L11 (ENSSBOG00000027665) ACOXL (ENSSBOG00000022933) ENSSBOG00000028828 ENSSBOG00000018392 BUB1 (ENSSBOG00000034999) ENSSBOG00000029824 ENSSBOG00000028061 NPHP1 (ENSSBOG00000022290) MALL (ENSSBOG00000035422) ENSSBOG00000031605 CALM2 (ENSSBOG00000020084) #22 STPG4 (ENSSBOG00000001933) #23 TTC7A (ENSSBOG00000029390) #24 MCFD2 (ENSSBOG00000022762) #25 ENSSBOG00000020881 SOCS5 (ENSSBOG00000017209) #26 CRIPT (ENSSBOG00000032153) ##27 ENSSBOG00000018440 #28 RHOQ (ENSSBOG00000034835) #29 ATP6V1E2 (ENSSBOG00000009180) #30 TMEM247 (ENSSBOG00000020562) #31 EPAS1 (ENSSBOG00000022669) PRKCE (ENSSBOG00000022902) #32 SRBD1 (ENSSBOG00000024982) #33 SIX2 (ENSSBOG00000034280) #34 ENSSBOG00000029291 Capuchin DUPLICATION Capuchin MODERN SPECIES 476 ENSCCAG00000033514 #22 STPG4 (ENSCCAG00000022948) #23 TTC7A (ENSCCAG00000033999) #24 MCFD2 (ENSCCAG00000027930) #25 SOCS5 (ENSCCAG00000007057) #26 CRIPT (ENSCCAG00000028179) #27 PIGF (ENSCCAG00000034227) #28 RHOQ (ENSCCAG00000037936) #29 TMEM247 (ENSCCAG00000027833) #31 EPAS1 (ENSCCAG00000034256) ENSCCAG00000030029 PRKCE (ENSCCAG00000029964) #32 Capuchin MODERN SPECIES 314 VWA8 (ENSCCAG00000033369) ENSCCAG00000037264 RGCC (ENSCCAG00000032569) NAA16 (ENSCCAG00000027828) MTRF1 (ENSCCAG00000035116) ENSCCAG00000031713 #22 KBTBD6 (ENSCCAG00000023579) WBP4 (ENSCCAG00000024682) ELF1 (ENSCCAG00000036811) ENSCCAG00000018207 PLPPR4 (ENSCCAG00000028873) PLPPR5 (ENSCCAG00000037863) SNX7 (ENSCCAG00000030230) ENSCCAG00000027012 Tarsier DUPLICATION Tarsier MODERN SPECIES 1368 ENSTSYG00000012564 #22 STPG4 (ENSTSYG00000004471) #23 Tarsier DUPLICATION Tarsier MODERN SPECIES 5834 ENSTSYG00000026488 RCE1 (ENSTSYG00000000373) C11orf80 (ENSTSYG00000000372) SPTBN2 (ENSTSYG00000009824) ENSTSYG00000036089 SCG5 (ENSTSYG00000011110) ARHGAP11A (ENSTSYG00000011104) ENSTSYG00000027867 #22 GJD2 (ENSTSYG00000007796) ACTC1 (ENSTSYG00000012045) AQR (ENSTSYG00000004244) ZNF770 (ENSTSYG00000004319) DPH6 (ENSTSYG00000000776) Tarsier MODERN SPECIES 3888 ENSTSYG00000034574 #22 MPLKIP (ENSTSYG00000014482) ENSTSYG00000006509 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.g #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 139 ENSOGAG00000031790 #10 ENSOGAG00000033422 NRXN1 (ENSOGAG00000006352) #10 FSHR (ENSOGAG00000009698) #12 LHCGR (ENSOGAG00000011759) #13 STON1 (ENSOGAG00000011753) #14 PPP1R21 (ENSOGAG00000011747) #15 FOXN2 (ENSOGAG00000011745) #16 ENSOGAG00000000555 FBXO11 (ENSOGAG00000011985) #17 MSH6 (ENSOGAG00000032157) #18 KCNK12 (ENSOGAG00000032494) #19 ENSOGAG00000024744 MSH2 (ENSOGAG00000015506) #20 ENSOGAG00000015415 #21 ENSOGAG00000008824 #22 STPG4 (ENSOGAG00000034812) #23 TTC7A (ENSOGAG00000008818) #24 MCFD2 (ENSOGAG00000009252) #25 SOCS5 (ENSOGAG00000010860) #26 CRIPT (ENSOGAG00000008089) #27 PIGF (ENSOGAG00000026734) #28 RHOQ (ENSOGAG00000033272) #29 ATP6V1E2 (ENSOGAG00000008085) #30 TMEM247 (ENSOGAG00000033557) #31 EPAS1 (ENSOGAG00000008084) PRKCE (ENSOGAG00000008081) #32 ENSOGAG00000029209 #32 ENSOGAG00000026831 SRBD1 (ENSOGAG00000001076) #33 SIX2 (ENSOGAG00000034436) #34 Bushbaby MODERN SPECIES 421 ENSOGAG00000027851 RTL5 (ENSOGAG00000016078) NHSL2 (ENSOGAG00000016081) ENSOGAG00000034301 ENSOGAG00000030953 #22 Lemuriformes ANCESTRAL SPECIES 23 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.g #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Lemuriformes_a ANCESTRAL SPECIES 10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.g #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Coquerels sifaka MODERN SPECIES 153 ENSPCOG00000015113 ENSPCOG00000020487 FSHR (ENSPCOG00000022018) #12 LHCGR (ENSPCOG00000022481) #13 GTF2A1L (ENSPCOG00000024995) STON1 (ENSPCOG00000018288) #14 PPP1R21 (ENSPCOG00000021946) #15 FOXN2 (ENSPCOG00000016686) #16 FBXO11 (ENSPCOG00000017053) #17 ENSPCOG00000025775 MSH6 (ENSPCOG00000014994) #18 KCNK12 (ENSPCOG00000026056) #19 MSH2 (ENSPCOG00000013918) #20 ENSPCOG00000014926 ENSPCOG00000017122 #21 CALM2 (ENSPCOG00000018612) #22 STPG4 (ENSPCOG00000025906) #23 TTC7A (ENSPCOG00000024053) #24 MCFD2 (ENSPCOG00000016535) #25 Greater bamboo lemur MODERN SPECIES 603 STON1 (ENSPSMG00000010415) #14 PPP1R21 (ENSPSMG00000010596) #15 FOXN2 (ENSPSMG00000010725) #16 FBXO11 (ENSPSMG00000010816) #17 MSH6 (ENSPSMG00000010874) #18 ENSPSMG00000010901 KCNK12 (ENSPSMG00000010908) #19 MSH2 (ENSPSMG00000011117) #20 ENSPSMG00000011251 #21 ENSPSMG00000011261 CALM2 (ENSPSMG00000011308) #22 STPG4 (ENSPSMG00000011318) #23 TTC7A (ENSPSMG00000011409) #24 MCFD2 (ENSPSMG00000011494) #25 SOCS5 (ENSPSMG00000011504) #26 Mouse lemur DUPLICATION Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES NMD3 (ENSMICG00000049196) SPTSSB (ENSMICG00000048968) OTOL1 (ENSMICG00000049331) RBP1 (ENSMICG00000048900) ENSMICG00000048995 CLSTN2 (ENSMICG00000049019) TRIM42 (ENSMICG00000049317) ENSMICG00000048906 SPSB4 (ENSMICG00000049106) PXYLP1 (ENSMICG00000048945) ZBTB38 (ENSMICG00000049344) RASA2 (ENSMICG00000049339) RNF7 (ENSMICG00000049320) GRK7 (ENSMICG00000049413) ATP1B3 (ENSMICG00000049313) ENSMICG00000049520 #22 TFDP2 (ENSMICG00000049186) GK5 (ENSMICG00000049424) XRN1 (ENSMICG00000048948) ATR (ENSMICG00000049477) PLS1 (ENSMICG00000049092) TRPC1 (ENSMICG00000049470) PCOLCE2 (ENSMICG00000048890) PAQR9 (ENSMICG00000049417) U2SURP (ENSMICG00000049294) CHST2 (ENSMICG00000048867) ENSMICG00000049556 SLC9A9 (ENSMICG00000049232) DIPK2A (ENSMICG00000048950) ENSMICG00000049299 PLOD2 (ENSMICG00000049252) Mouse lemur MODERN SPECIES 14 PEG3 (ENSMICG00000027819) ENSMICG00000013775 ENSMICG00000017092 DUXA (ENSMICG00000006042) USP29 (ENSMICG00000036798) ENSMICG00000038081 ENSMICG00000034869 ZNF583 (ENSMICG00000007642) ZNF582 (ENSMICG00000012915) ENSMICG00000045447 SMIM17 (ENSMICG00000026730) ZNF71 (ENSMICG00000034282) ZNF470 (ENSMICG00000027019) ZFP28 (ENSMICG00000008783) ZNF471 (ENSMICG00000014500) ENSMICG00000047451 #22 ENSMICG00000030534 EDDM13 (ENSMICG00000044584) ZNF444 (ENSMICG00000017167) ZNF787 (ENSMICG00000042044) NLRP5 (ENSMICG00000046761) SIGLECL1 (ENSMICG00000046318) IGLON5 (ENSMICG00000034690) VSIG10L (ENSMICG00000030990) ETFB (ENSMICG00000015607) CLDND2 (ENSMICG00000047601) NKG7 (ENSMICG00000046911) LIM2 (ENSMICG00000042579) C19orf84 (ENSMICG00000028408) ENSMICG00000003146 ENSMICG00000031727 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 2 THAP5 (ENSMICG00000037373) ENSMICG00000033400 NRCAM (ENSMICG00000001279) LAMB4 (ENSMICG00000001263) LAMB1 (ENSMICG00000001246) DLD (ENSMICG00000036659) SLC26A3 (ENSMICG00000012950) CBLL1 (ENSMICG00000037843) SLC26A4 (ENSMICG00000012921) BCAP29 (ENSMICG00000012912) ENSMICG00000042944 ENSMICG00000012878 GPR22 (ENSMICG00000027599) HBP1 (ENSMICG00000012858) PRKAR2B (ENSMICG00000012848) ENSMICG00000033010 #22 PIK3CG (ENSMICG00000001209) ENSMICG00000045262 NAMPT (ENSMICG00000007240) SYPL1 (ENSMICG00000031837) CDHR3 (ENSMICG00000010974) ATXN7L1 (ENSMICG00000010963) EFCAB10 (ENSMICG00000010958) RINT1 (ENSMICG00000010945) PUS7 (ENSMICG00000010938) ENSMICG00000006466 KMT2E (ENSMICG00000006426) ENSMICG00000032085 LHFPL3 (ENSMICG00000009078) ORC5 (ENSMICG00000009070) RELN (ENSMICG00000008402) Mouse lemur MODERN SPECIES 7 ERN1 (ENSMICG00000010050) ICAM2 (ENSMICG00000042703) PRR29 (ENSMICG00000028288) SCN4A (ENSMICG00000010028) CD79B (ENSMICG00000031356) ENSMICG00000010016 ENSMICG00000046974 SMARCD2 (ENSMICG00000010005) PSMC5 (ENSMICG00000009989) FTSJ3 (ENSMICG00000045996) ENSMICG00000031564 DDX42 (ENSMICG00000009952) CCDC47 (ENSMICG00000009946) STRADA (ENSMICG00000026424) LIMD2 (ENSMICG00000030951) ENSMICG00000037607 #22 MAP3K3 (ENSMICG00000003825) ENSMICG00000043629 DCAF7 (ENSMICG00000034244) KCNH6 (ENSMICG00000003800) ACE (ENSMICG00000003785) CYB561 (ENSMICG00000014405) TANC2 (ENSMICG00000003772) MARCHF10 (ENSMICG00000013753) MRC2 (ENSMICG00000013679) ENSMICG00000043977 TLK2 (ENSMICG00000013657) ENSMICG00000044781 EFCAB3 (ENSMICG00000007098) ITGB3 (ENSMICG00000010765) MYL4 (ENSMICG00000010780) Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Tree shrew MODERN SPECIES 3037 CALM2 (ENSTBEG00000000569) #22 STPG4 (ENSTBEG00000000467) #23 Glires ANCESTRAL SPECIES 13 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Hystricomorpha_a ANCESTRAL SPECIES 31 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 18 ENSCPOG00000020392 #10 ENSCPOG00000040367 #10 ENSCPOG00000003316 #10 ENSCPOG00000036335 FSHR (ENSCPOG00000011752) #12 LHCGR (ENSCPOG00000015685) #13 GTF2A1L (ENSCPOG00000033931) STON1 (ENSCPOG00000015684) #14 PPP1R21 (ENSCPOG00000009740) #15 FOXN2 (ENSCPOG00000034360) #16 FBXO11 (ENSCPOG00000000933) #17 MSH6 (ENSCPOG00000000931) #18 KCNK12 (ENSCPOG00000035370) #19 MSH2 (ENSCPOG00000014297) #20 EPCAM (ENSCPOG00000003748) #21 ENSCPOG00000012181 #22 STPG4 (ENSCPOG00000020691) #23 TTC7A (ENSCPOG00000012175) #24 MCFD2 (ENSCPOG00000039174) #25 SOCS5 (ENSCPOG00000031517) #26 CRIPT (ENSCPOG00000008081) #27 PIGF (ENSCPOG00000035095) #28 RHOQ (ENSCPOG00000008075) #29 ATP6V1E2 (ENSCPOG00000019930) #30 EPAS1 (ENSCPOG00000014242) PRKCE (ENSCPOG00000024627) #32 SRBD1 (ENSCPOG00000004773) #33 ENSCPOG00000023392 #22 SIX2 (ENSCPOG00000015548) #34 SIX3 (ENSCPOG00000022943) #35 CAMKMT (ENSCPOG00000009522) #36 Guinea pig MODERN SPECIES 18 KCNK12 (ENSCPOG00000035370) #19 MSH2 (ENSCPOG00000014297) #20 EPCAM (ENSCPOG00000003748) #21 ENSCPOG00000012181 #22 STPG4 (ENSCPOG00000020691) #23 TTC7A (ENSCPOG00000012175) #24 MCFD2 (ENSCPOG00000039174) #25 SOCS5 (ENSCPOG00000031517) #26 CRIPT (ENSCPOG00000008081) #27 PIGF (ENSCPOG00000035095) #28 RHOQ (ENSCPOG00000008075) #29 ATP6V1E2 (ENSCPOG00000019930) #30 EPAS1 (ENSCPOG00000014242) PRKCE (ENSCPOG00000024627) #32 SRBD1 (ENSCPOG00000004773) #33 ENSCPOG00000023392 #22 SIX2 (ENSCPOG00000015548) #34 SIX3 (ENSCPOG00000022943) #35 CAMKMT (ENSCPOG00000009522) #36 PREPL (ENSCPOG00000009510) #37 SLC3A1 (ENSCPOG00000009505) PPM1B (ENSCPOG00000009259) ENSCPOG00000000204 ABCG8 (ENSCPOG00000000203) ABCG5 (ENSCPOG00000025027) DYNC2LI1 (ENSCPOG00000000202) PLEKHH2 (ENSCPOG00000013966) THADA (ENSCPOG00000000838) ZFP36L2 (ENSCPOG00000022038) HAAO (ENSCPOG00000024944) MTA3 (ENSCPOG00000005357) Hystricomorpha_b ANCESTRAL SPECIES 26 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00940000164310.e ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j.q #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Long-tailed chinchilla MODERN SPECIES 127 CCDC39 (ENSCLAG00000012683) TTC14 (ENSCLAG00000013302) PEX5L (ENSCLAG00000014042) USP13 (ENSCLAG00000015308) ENSCLAG00000014903 ENSCLAG00000015039 ACTL6A (ENSCLAG00000012251) GNB4 (ENSCLAG00000015522) MFN1 (ENSCLAG00000015912) ZNF639 (ENSCLAG00000011168) KCNMB3 (ENSCLAG00000014741) PIK3CA (ENSCLAG00000015135) ZMAT3 (ENSCLAG00000013464) KCNMB2 (ENSCLAG00000014319) TBL1XR1 (ENSCLAG00000013893) ENSCLAG00000018045 #22 NAALADL2 (ENSCLAG00000012428) NLGN1 (ENSCLAG00000010604) SPATA16 (ENSCLAG00000016484) ECT2 (ENSCLAG00000015030) ENSCLAG00000013454 NCEH1 (ENSCLAG00000011865) ENSCLAG00000017893 TNFSF10 (ENSCLAG00000015552) GHSR (ENSCLAG00000012973) FNDC3B (ENSCLAG00000015717) TMEM212 (ENSCLAG00000016037) PLD1 (ENSCLAG00000012419) TNIK (ENSCLAG00000011229) SLC2A2 (ENSCLAG00000014131) ENSCLAG00000013461 Degu MODERN SPECIES 61 MRPL39 (ENSODEG00000013710) FSHR (ENSODEG00000014615) #12 ENSODEG00000012799 LHCGR (ENSODEG00000011660) #13 GTF2A1L (ENSODEG00000012958) STON1 (ENSODEG00000012778) #14 PPP1R21 (ENSODEG00000013346) #15 FOXN2 (ENSODEG00000012405) #16 FBXO11 (ENSODEG00000013014) #17 MSH6 (ENSODEG00000012640) #18 ENSODEG00000012086 ENSODEG00000020322 KCNK12 (ENSODEG00000015067) #19 MSH2 (ENSODEG00000012853) #20 EPCAM (ENSODEG00000015335) #21 CALM2 (ENSODEG00000013273) #22 STPG4 (ENSODEG00000012221) #23 TTC7A (ENSODEG00000011584) #24 ENSODEG00000011724 #25 SOCS5 (ENSODEG00000019978) #26 ENSODEG00000011714 #27 ENSODEG00000013963 #28 RHOQ (ENSODEG00000012565) #29 EPAS1 (ENSODEG00000011675) PRKCE (ENSODEG00000011779) #32 SRBD1 (ENSODEG00000012095) #33 ENSODEG00000012336 SIX2 (ENSODEG00000011970) #34 SIX3 (ENSODEG00000011611) #35 ENSODEG00000019924 ENSODEG00000019927 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000015032 #10 ENSHGLG00000049442 FSHR (ENSHGLG00000049867) #12 LHCGR (ENSHGLG00000045687) #13 STON1 (ENSHGLG00000014159) #14 PPP1R21 (ENSHGLG00000016153) #15 FOXN2 (ENSHGLG00000041365) #16 FBXO11 (ENSHGLG00000014524) #17 ENSHGLG00000014228 MSH6 (ENSHGLG00000014307) #18 ENSHGLG00000018270 KCNK12 (ENSHGLG00000044659) #19 MSH2 (ENSHGLG00000013169) #20 EPCAM (ENSHGLG00000017588) #21 ENSHGLG00000041487 CALM2 (ENSHGLG00000017572) #22 ENSHGLG00000035421 STPG4 (ENSHGLG00000010005) #23 TTC7A (ENSHGLG00000008039) #24 ENSHGLG00000006612 #25 ENSHGLG00000000631 SOCS5 (ENSHGLG00000006519) #26 CRIPT (ENSHGLG00000037711) ##27 ENSHGLG00000010143 #28 RHOQ (ENSHGLG00000033850) #29 ATP6V1E2 (ENSHGLG00000050960) #30 ENSHGLG00000036650 #31 ENSHGLG00000005572 EPAS1 (ENSHGLG00000007510) ENSHGLG00000037274 PRKCE (ENSHGLG00000005958) #32 Sciuridae ANCESTRAL SPECIES 16 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 5 NRXN1 (ENSSVLG00005019798) #10 ENSSVLG00005021489 FSHR (ENSSVLG00005021556) #12 LHCGR (ENSSVLG00005021740) #13 GTF2A1L (ENSSVLG00005022039) STON1 (ENSSVLG00005022192) #14 ENSSVLG00005022227 PPP1R21 (ENSSVLG00005022287) #15 ENSSVLG00005022380 FOXN2 (ENSSVLG00005022414) #16 FBXO11 (ENSSVLG00005022435) #17 MSH6 (ENSSVLG00005022532) #18 KCNK12 (ENSSVLG00005022712) #19 ENSSVLG00005022741 #20 ENSSVLG00005022780 #21 ENSSVLG00005022866 #22 STPG4 (ENSSVLG00005022983) #23 TTC7A (ENSSVLG00005023062) #24 MCFD2 (ENSSVLG00005023123) #25 SOCS5 (ENSSVLG00005023198) #26 ENSSVLG00005023214 #27 PIGF (ENSSVLG00005023252) #28 RHOQ (ENSSVLG00005023285) #29 ATP6V1E2 (ENSSVLG00005023299) #30 TMEM247 (ENSSVLG00005023317) #31 EPAS1 (ENSSVLG00005023349) PRKCE (ENSSVLG00005023394) #32 SRBD1 (ENSSVLG00005023450) #33 ENSSVLG00005023584 SIX2 (ENSSVLG00005023608) #34 SIX3 (ENSSVLG00005023628) #35 Eurasian red squirrel MODERN SPECIES 14 CYP4V2 (ENSSVLG00005010776) FAM149A (ENSSVLG00005005118) TLR3 (ENSSVLG00005005052) SORBS2 (ENSSVLG00005004516) PDLIM3 (ENSSVLG00005004157) ENSSVLG00005004106 ENSSVLG00005004094 C4orf47 (ENSSVLG00005004080) UFSP2 (ENSSVLG00005004055) ANKRD37 (ENSSVLG00005004043) LRP2BP (ENSSVLG00005004014) SNX25 (ENSSVLG00005003954) CFAP97 (ENSSVLG00005003904) SLC25A4 (ENSSVLG00005003887) HELT (ENSSVLG00005003859) ENSSVLG00005003842 #22 ACSL1 (ENSSVLG00005003813) ENSSVLG00005003774 PRIMPOL (ENSSVLG00005003718) CASP3 (ENSSVLG00005003677) ENSSVLG00005003654 IRF2 (ENSSVLG00005003630) ENPP6 (ENSSVLG00005003610) ENSSVLG00005003590 TRAPPC11 (ENSSVLG00005003499) RWDD4 (ENSSVLG00005003423) ING2 (ENSSVLG00005003400) CDKN2AIP (ENSSVLG00005003382) ENSSVLG00005003376 ENSSVLG00005003361 WWC2 (ENSSVLG00005003319) Marmotini ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.i #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Alpin marmot MODERN SPECIES 6 CHAC2 (ENSMMMG00000008065) #9 ENSMMMG00000008091 ENSMMMG00000008163 NRXN1 (ENSMMMG00000008244) #10 ENSMMMG00000009117 FSHR (ENSMMMG00000009138) #12 LHCGR (ENSMMMG00000009175) #13 GTF2A1L (ENSMMMG00000009226) STON1 (ENSMMMG00000009238) #14 PPP1R21 (ENSMMMG00000009249) #15 FOXN2 (ENSMMMG00000009297) #16 FBXO11 (ENSMMMG00000009335) #17 MSH6 (ENSMMMG00000009374) #18 MSH2 (ENSMMMG00000009438) #20 EPCAM (ENSMMMG00000009917) #21 CALM2 (ENSMMMG00000009965) #22 STPG4 (ENSMMMG00000009975) #23 TTC7A (ENSMMMG00000010016) #24 ENSMMMG00000010047 #25 SOCS5 (ENSMMMG00000010100) #26 CRIPT (ENSMMMG00000010107) #27 PIGF (ENSMMMG00000010120) #28 RHOQ (ENSMMMG00000010128) #29 ATP6V1E2 (ENSMMMG00000010180) #30 TMEM247 (ENSMMMG00000010182) #31 EPAS1 (ENSMMMG00000010195) PRKCE (ENSMMMG00000010291) #32 ENSMMMG00000010335 ENSMMMG00000010346 SRBD1 (ENSMMMG00000010355) #33 SIX2 (ENSMMMG00000010951) #34 Marmotini_b ANCESTRAL SPECIES 95 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617.i #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Squirrel MODERN SPECIES 108 ENSSTOG00000031131 #10 ENSSTOG00000029552 #10 ENSSTOG00000000682 #10 ENSSTOG00000002126 #10 FSHR (ENSSTOG00000010396) #12 LHCGR (ENSSTOG00000023268) #13 GTF2A1L (ENSSTOG00000005847) STON1 (ENSSTOG00000033757) #14 PPP1R21 (ENSSTOG00000005801) #15 FOXN2 (ENSSTOG00000000862) #16 FBXO11 (ENSSTOG00000004759) #17 MSH6 (ENSSTOG00000022429) #18 KCNK12 (ENSSTOG00000026767) #19 MSH2 (ENSSTOG00000007110) #20 EPCAM (ENSSTOG00000008631) #21 CALM2 (ENSSTOG00000021814) #22 STPG4 (ENSSTOG00000016339) #23 TTC7A (ENSSTOG00000022551) #24 MCFD2 (ENSSTOG00000003692) #25 SOCS5 (ENSSTOG00000004937) #26 CRIPT (ENSSTOG00000030474) ##27 ENSSTOG00000001373 #28 RHOQ (ENSSTOG00000001369) #29 TMEM247 (ENSSTOG00000001366) #31 EPAS1 (ENSSTOG00000012628) PRKCE (ENSSTOG00000012596) #32 SRBD1 (ENSSTOG00000005898) #33 SIX2 (ENSSTOG00000028289) #34 SIX3 (ENSSTOG00000028280) #35 CAMKMT (ENSSTOG00000008349) #36 PREPL (ENSSTOG00000004860) #37 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 111 P2RY1 (ENSUPAG00010006704) RAP2B (ENSUPAG00010006710) ARHGEF26 (ENSUPAG00010006714) DHX36 (ENSUPAG00010006741) GPR149 (ENSUPAG00010006785) MME (ENSUPAG00010006795) ENSUPAG00010006817 PLCH1 (ENSUPAG00010006835) ENSUPAG00010007178 #22 C3orf33 (ENSUPAG00010007194) SLC33A1 (ENSUPAG00010007214) GMPS (ENSUPAG00010007230) ENSUPAG00010007272 KCNAB1 (ENSUPAG00010007381) SSR3 (ENSUPAG00010007397) ENSUPAG00010007423 TIPARP (ENSUPAG00010007433) ENSUPAG00010007447 LEKR1 (ENSUPAG00010007452) CCNL1 (ENSUPAG00010007457) VEPH1 (ENSUPAG00010007462) PTX3 (ENSUPAG00010007477) SHOX2 (ENSUPAG00010007482) RSRC1 (ENSUPAG00010007492) Arctic ground squirrel MODERN SPECIES 1299 ENSUPAG00010007569 #22 Arctic ground squirrel MODERN SPECIES 38 NRXN1 (ENSUPAG00010019885) #10 FSHR (ENSUPAG00010020467) #12 LHCGR (ENSUPAG00010020477) #13 GTF2A1L (ENSUPAG00010020487) STON1 (ENSUPAG00010020489) #14 PPP1R21 (ENSUPAG00010020493) #15 FOXN2 (ENSUPAG00010020506) #16 FBXO11 (ENSUPAG00010020510) #17 MSH6 (ENSUPAG00010020546) #18 KCNK12 (ENSUPAG00010020558) #19 MSH2 (ENSUPAG00010020566) #20 EPCAM (ENSUPAG00010020586) #21 ENSUPAG00010020594 #22 STPG4 (ENSUPAG00010020605) #23 TTC7A (ENSUPAG00010020623) #24 MCFD2 (ENSUPAG00010020633) #25 SOCS5 (ENSUPAG00010020643) #26 ENSUPAG00010020646 #27 ENSUPAG00010020656 #28 RHOQ (ENSUPAG00010020662) #29 ATP6V1E2 (ENSUPAG00010020666) #30 TMEM247 (ENSUPAG00010020670) #31 EPAS1 (ENSUPAG00010020676) PRKCE (ENSUPAG00010020686) #32 ENSUPAG00010020701 #33 ENSUPAG00010020717 #33 SIX2 (ENSUPAG00010020725) #34 SIX3 (ENSUPAG00010020729) #35 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Kangaroo rat MODERN SPECIES 356 Chac2 (ENSDORG00000000943) #9 Asb3 (ENSDORG00000000942) #8 Nrxn1 (ENSDORG00000008504) #10 Fshr (ENSDORG00000006417) #12 Lhcgr (ENSDORG00000007024) #13 Gtf2a1l (ENSDORG00000025799) Ston1 (ENSDORG00000007023) #14 Ppp1r21 (ENSDORG00000007021) #15 Foxn2 (ENSDORG00000007020) #16 ENSDORG00000029277 #17 ENSDORG00000012562 #17 Msh6 (ENSDORG00000012561) #18 Kcnk12 (ENSDORG00000014373) #19 Msh2 (ENSDORG00000006850) #20 Epcam (ENSDORG00000006849) #21 Calm2 (ENSDORG00000010058) #22 Stpg4 (ENSDORG00000010057) #23 Ttc7 (ENSDORG00000010053) #24 Mcfd2 (ENSDORG00000026885) #25 Socs5 (ENSDORG00000028708) #26 ENSDORG00000006085 #27 Pigf (ENSDORG00000006083) #28 Rhoq (ENSDORG00000026960) #29 Tmem247 (ENSDORG00000000832) #31 Epas1 (ENSDORG00000003635) Prkce (ENSDORG00000010474) #32 Srbd1 (ENSDORG00000010468) #33 Six2 (ENSDORG00000005524) #34 Six3 (ENSDORG00000026527) #35 Camkmt (ENSDORG00000003119) #36 Prepl (ENSDORG00000003117) #37 Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Lesser Egyptian jerboa MODERN SPECIES 74 ENSJJAG00000011457 #10 ENSJJAG00000014946 #10 ENSJJAG00000011233 ENSJJAG00000011083 Fshr (ENSJJAG00000015980) #12 Lhcgr (ENSJJAG00000014188) #13 Gtf2a1l (ENSJJAG00000016480) Ston1 (ENSJJAG00000017027) #14 Ppp1r21 (ENSJJAG00000021055) #15 ENSJJAG00000000448 #16 Fbxo11 (ENSJJAG00000017285) #17 Msh6 (ENSJJAG00000009057) #18 Kcnk12 (ENSJJAG00000024426) #19 Msh2 (ENSJJAG00000012482) #20 Epcam (ENSJJAG00000010101) #21 Calm2 (ENSJJAG00000023155) #22 Stpg4 (ENSJJAG00000016935) #23 Ttc7 (ENSJJAG00000015555) #24 Mcfd2 (ENSJJAG00000009684) #25 Socs5 (ENSJJAG00000020952) #26 Pigf (ENSJJAG00000017752) #28 Rhoq (ENSJJAG00000008489) #29 Epas1 (ENSJJAG00000023176) Prkce (ENSJJAG00000011942) #32 Srbd1 (ENSJJAG00000022244) #33 Six2 (ENSJJAG00000010682) #34 Camkmt (ENSJJAG00000022773) #36 Prepl (ENSJJAG00000024032) #37 Slc3a1 (ENSJJAG00000024227) Ppm1b (ENSJJAG00000002021) Lrpprc (ENSJJAG00000020475) Muroidea ANCESTRAL SPECIES 21 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00970000193722 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Muroidea_A ANCESTRAL SPECIES 24 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Cricetidae ANCESTRAL SPECIES 24 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Cricetinae ANCESTRAL SPECIES 4 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001005913 ENSCGRG00001003809 ENSCGRG00001010857 #10 Fshr (ENSCGRG00001014045) #12 ENSCGRG00001013067 Lhcgr (ENSCGRG00001019339) #13 Gtf2a1l (ENSCGRG00001015738) Ston1 (ENSCGRG00001014467) #14 Ppp1r21 (ENSCGRG00001012297) #15 Foxn2 (ENSCGRG00001011928) #16 Fbxo11 (ENSCGRG00001010880) #17 Msh6 (ENSCGRG00001006510) #18 Kcnk12 (ENSCGRG00001024728) #19 Msh2 (ENSCGRG00001024165) #20 Epcam (ENSCGRG00001015160) #21 ENSCGRG00001012854 #22 Stpg4 (ENSCGRG00001014859) #23 Ttc7 (ENSCGRG00001024318) #24 Mcfd2 (ENSCGRG00001022506) #25 Socs5 (ENSCGRG00001010671) #26 ENSCGRG00001019564 ##27 Pigf (ENSCGRG00001005447) #28 Rhoq (ENSCGRG00001001618) #29 Atp6v1e2 (ENSCGRG00001008046) #30 Tmem247 (ENSCGRG00001024175) #31 Epas1 (ENSCGRG00001021169) Prkce (ENSCGRG00001014768) #32 Srbd1 (ENSCGRG00001000513) #33 Six2 (ENSCGRG00001022401) #34 Six3 (ENSCGRG00001019967) #35 Camkmt (ENSCGRG00001019060) #36 Chinese hamster chok1gshd MODERN SPECIES 284 ENSCGRG00001002095 Limd1 (ENSCGRG00001018965) Sacm1l (ENSCGRG00001010636) Slc6a20b (ENSCGRG00001013720) Slc6a20a (ENSCGRG00001020426) Lztfl1 (ENSCGRG00001000339) Ccr9 (ENSCGRG00001023164) Cxcr6 (ENSCGRG00001005915) Fyco1 (ENSCGRG00001018910) Xcr1 (ENSCGRG00001010783) Ccr1 (ENSCGRG00001012050) Ccr1l1 (ENSCGRG00001011035) Ccr3 (ENSCGRG00001011081) Ccr2 (ENSCGRG00001001130) Ccr5 (ENSCGRG00001001844) ENSCGRG00001017694 #22 Chinese hamster chok1gshd MODERN SPECIES 188 Prom2 (ENSCGRG00001013194) Kcnip3 (ENSCGRG00001013000) Fahd2a (ENSCGRG00001008625) Gpat2 (ENSCGRG00001013246) Adra2b (ENSCGRG00001010589) Astl (ENSCGRG00001018505) Dusp2 (ENSCGRG00001018898) Stard7 (ENSCGRG00001019429) Tmem127 (ENSCGRG00001013245) CIAO1 (ENSCGRG00001016622) Snrnp200 (ENSCGRG00001022610) ENSCGRG00001014240 Ncaph (ENSCGRG00001018072) Blvra (ENSCGRG00001002848) Ap4e1 (ENSCGRG00001023130) ENSCGRG00001021438 #22 Sppl2a (ENSCGRG00001004702) Trpm7 (ENSCGRG00001022305) ENSCGRG00001020900 Usp50 (ENSCGRG00001024172) Usp8 (ENSCGRG00001023611) Gabpb1 (ENSCGRG00001022883) Hdc (ENSCGRG00001023140) Slc27a2 (ENSCGRG00001021565) Atp8b4 (ENSCGRG00001023798) Dtwd1 (ENSCGRG00001011621) Fgf7 (ENSCGRG00001021672) ENSCGRG00001022441 Galk2 (ENSCGRG00001023593) Cops2 (ENSCGRG00001014155) Secisbp2l (ENSCGRG00001018900) Golden Hamster MODERN SPECIES 687 Fshr (ENSMAUG00000005204) #12 Lhcgr (ENSMAUG00000007411) #13 Gtf2a1l (ENSMAUG00000000144) Ston1 (ENSMAUG00000001837) #14 Ppp1r21 (ENSMAUG00000000885) #15 ENSMAUG00000018996 #16 ENSMAUG00000017971 Fbxo11 (ENSMAUG00000010524) #17 ENSMAUG00000007814 Kcnk12 (ENSMAUG00000000370) #19 Msh2 (ENSMAUG00000019403) #20 Epcam (ENSMAUG00000000320) #21 Calm2 (ENSMAUG00000019415) #22 Stpg4 (ENSMAUG00000018310) #23 Ttc7 (ENSMAUG00000015013) #24 Socs5 (ENSMAUG00000014386) #26 Cript (ENSMAUG00000018736) #27 Pigf (ENSMAUG00000017287) #28 Rhoq (ENSMAUG00000006277) #29 Atp6v1e2 (ENSMAUG00000016357) #30 Epas1 (ENSMAUG00000015168) Prkce (ENSMAUG00000000294) #32 ENSMAUG00000019109 #32 Srbd1 (ENSMAUG00000013916) #33 Six2 (ENSMAUG00000010227) #34 Six3 (ENSMAUG00000011873) #35 Camkmt (ENSMAUG00000009845) #36 Prepl (ENSMAUG00000007016) #37 Cricetidae_B ANCESTRAL SPECIES 39 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Northern American deer mouse MODERN SPECIES 14 ENSPEMG00000027751 Nrxn1 (ENSPEMG00000023385) #10 ENSPEMG00000030210 Fshr (ENSPEMG00000023546) #12 ENSPEMG00000031007 Lhcgr (ENSPEMG00000020668) #13 Gtf2a1l (ENSPEMG00000020907) Ston1 (ENSPEMG00000022164) #14 ENSPEMG00000030792 ENSPEMG00000028108 Foxn2 (ENSPEMG00000021326) #16 Fbxo11 (ENSPEMG00000020489) #17 Msh6 (ENSPEMG00000013591) #18 Kcnk12 (ENSPEMG00000024468) #19 Msh2 (ENSPEMG00000015577) #20 Calm2 (ENSPEMG00000010363) #22 Stpg4 (ENSPEMG00000020631) #23 Ttc7 (ENSPEMG00000023689) #24 Mcfd2 (ENSPEMG00000026904) #25 Socs5 (ENSPEMG00000027632) #26 Cript (ENSPEMG00000021196) #27 Pigf (ENSPEMG00000020361) #28 Rhoq (ENSPEMG00000030964) #29 Atp6v1e2 (ENSPEMG00000016186) #30 Tmem247 (ENSPEMG00000020426) #31 Epas1 (ENSPEMG00000020696) Prkce (ENSPEMG00000020491) #32 Srbd1 (ENSPEMG00000020684) #33 Six2 (ENSPEMG00000027506) #34 Six3 (ENSPEMG00000008718) #35 Camkmt (ENSPEMG00000022975) #36 Prairie vole MODERN SPECIES 3 ENSMOCG00000009508 ENSMOCG00000018863 #10 ENSMOCG00000012986 Fshr (ENSMOCG00000001235) #12 Lhcgr (ENSMOCG00000015497) #13 Gtf2a1l (ENSMOCG00000001793) Ston1 (ENSMOCG00000021349) #14 Ppp1r21 (ENSMOCG00000014427) #15 Foxn2 (ENSMOCG00000003766) #16 Fbxo11 (ENSMOCG00000018879) #17 Msh6 (ENSMOCG00000017271) #18 Kcnk12 (ENSMOCG00000017929) #19 ENSMOCG00000001820 Msh2 (ENSMOCG00000003615) #20 Epcam (ENSMOCG00000017750) #21 Calm2 (ENSMOCG00000007388) #22 Stpg4 (ENSMOCG00000006592) #23 Ttc7 (ENSMOCG00000019798) #24 Mcfd2 (ENSMOCG00000012996) #25 Socs5 (ENSMOCG00000007202) #26 Cript (ENSMOCG00000001266) #27 Pigf (ENSMOCG00000014964) #28 Rhoq (ENSMOCG00000000818) #29 Atp6v1e2 (ENSMOCG00000012541) #30 Tmem247 (ENSMOCG00000003264) #31 Epas1 (ENSMOCG00000018764) Prkce (ENSMOCG00000010243) #32 Srbd1 (ENSMOCG00000018716) #33 Six2 (ENSMOCG00000012865) #34 Six3 (ENSMOCG00000003464) #35 ENSMOCG00000021682 Murinae ANCESTRAL SPECIES 8 ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Mus ANCESTRAL SPECIES 16 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00860000136128 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Shrew mouse MODERN SPECIES 9 Mettl4 (MGP_PahariEiJ_G0020952) Adcyap1 (MGP_PahariEiJ_G0020951) MGP_PahariEiJ_G0020950 Nrxn1 (MGP_PahariEiJ_G0020949) #10 Fshr (MGP_PahariEiJ_G0020948) #12 Lhcgr (MGP_PahariEiJ_G0020947) #13 MGP_PahariEiJ_G0020946 Ston1 (MGP_PahariEiJ_G0020945) #14 Ppp1r21 (MGP_PahariEiJ_G0020944) #15 Foxn2 (MGP_PahariEiJ_G0020943) #16 Fbxo11 (MGP_PahariEiJ_G0020942) #17 Msh6 (MGP_PahariEiJ_G0020941) #18 Kcnk12 (MGP_PahariEiJ_G0020940) #19 Msh2 (MGP_PahariEiJ_G0020939) #20 Epcam (MGP_PahariEiJ_G0020938) #21 Calm2 (MGP_PahariEiJ_G0020937) #22 Stpg4 (MGP_PahariEiJ_G0020936) #23 Ttc7 (MGP_PahariEiJ_G0020935) #24 Mcfd2 (MGP_PahariEiJ_G0020934) #25 Socs5 (MGP_PahariEiJ_G0020933) #26 Cript (MGP_PahariEiJ_G0020932) #27 Pigf (MGP_PahariEiJ_G0020931) #28 Rhoq (MGP_PahariEiJ_G0020930) #29 Atp6v1e2 (MGP_PahariEiJ_G0020929) #30 Tmem247 (MGP_PahariEiJ_G0020928) #31 Epas1 (MGP_PahariEiJ_G0020927) MGP_PahariEiJ_G0020926 Prkce (MGP_PahariEiJ_G0020925) #32 Srbd1 (MGP_PahariEiJ_G0020924) #33 Six2 (MGP_PahariEiJ_G0020923) #34 Six3 (MGP_PahariEiJ_G0020922) #35 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES 10 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.cb #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00860000136128 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Mus_B ANCESTRAL SPECIES 9 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.cb #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00860000136128 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Mus_C ANCESTRAL SPECIES 9 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00860000135827 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.cb #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00860000136128 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Steppe mouse MODERN SPECIES 30 Kcnk12 (ENSMSIG00000010022) #19 Msh2 (ENSMSIG00000010025) #20 Epcam (ENSMSIG00000010051) #21 Calm2 (ENSMSIG00000010170) #22 Stpg4 (ENSMSIG00000010187) #23 Ttc7 (ENSMSIG00000010241) #24 Mcfd2 (ENSMSIG00000010432) #25 Socs5 (ENSMSIG00000010466) #26 Cript (ENSMSIG00000010490) #27 Pigf (ENSMSIG00000010538) #28 Rhoq (ENSMSIG00000010557) #29 Atp6v1e2 (ENSMSIG00000010576) #30 Tmem247 (ENSMSIG00000010600) #31 Epas1 (ENSMSIG00000010616) Prkce (ENSMSIG00000010675) #32 ENSMSIG00000010740 Srbd1 (ENSMSIG00000010750) #33 ENSMSIG00000010853 ENSMSIG00000010891 spretus MODERN SPECIES 8 Adcyap1 (MGP_SPRETEiJ_G0022878) MGP_SPRETEiJ_G0022877 Nrxn1 (MGP_SPRETEiJ_G0022876) #10 Fshr (MGP_SPRETEiJ_G0022875) #12 Lhcgr (MGP_SPRETEiJ_G0022874) #13 Gtf2a1l (MGP_SPRETEiJ_G0022873) Ston1 (MGP_SPRETEiJ_G0022872) #14 Ppp1r21 (MGP_SPRETEiJ_G0022871) #15 Foxn2 (MGP_SPRETEiJ_G0022870) #16 MGP_SPRETEiJ_G0022869 #17 Msh6 (MGP_SPRETEiJ_G0022868) #18 MGP_SPRETEiJ_G0022867 Kcnk12 (MGP_SPRETEiJ_G0022866) #19 Msh2 (MGP_SPRETEiJ_G0022865) #20 Epcam (MGP_SPRETEiJ_G0022864) #21 Calm2 (MGP_SPRETEiJ_G0022863) #22 Stpg4 (MGP_SPRETEiJ_G0022862) #23 Ttc7 (MGP_SPRETEiJ_G0022861) #24 Mcfd2 (MGP_SPRETEiJ_G0022860) #25 Socs5 (MGP_SPRETEiJ_G0022859) #26 Cript (MGP_SPRETEiJ_G0022858) #27 Pigf (MGP_SPRETEiJ_G0022857) #28 Rhoq (MGP_SPRETEiJ_G0022856) #29 Atp6v1e2 (MGP_SPRETEiJ_G0022855) #30 Tmem247 (MGP_SPRETEiJ_G0022854) #31 Epas1 (MGP_SPRETEiJ_G0022853) MGP_SPRETEiJ_G0022852 Prkce (MGP_SPRETEiJ_G0022851) #32 Srbd1 (MGP_SPRETEiJ_G0022850) #33 Six2 (MGP_SPRETEiJ_G0022849) #34 Six3 (MGP_SPRETEiJ_G0022848) #35 Mouse MODERN SPECIES 8 Mettl4 (ENSMUSG00000055660) Adcyap1 (ENSMUSG00000024256) Nrxn1 (ENSMUSG00000024109) #10 Gm10184 (ENSMUSG00000066878) Fshr (ENSMUSG00000032937) #12 Lhcgr (ENSMUSG00000024107) #13 Gtf2a1l (ENSMUSG00000024154) Ston1 (ENSMUSG00000033855) #14 Ppp1r21 (ENSMUSG00000034709) #15 Foxn2 (ENSMUSG00000034998) #16 Fbxo11 (ENSMUSG00000005371) #17 Msh6 (ENSMUSG00000005370) #18 Kcnk12 (ENSMUSG00000050138) #19 Msh2 (ENSMUSG00000024151) #20 Epcam (ENSMUSG00000045394) #21 Calm2 (ENSMUSG00000036438) #22 Stpg4 (ENSMUSG00000036557) #23 Ttc7 (ENSMUSG00000036918) #24 Mcfd2 (ENSMUSG00000024150) #25 Socs5 (ENSMUSG00000037104) #26 Cript (ENSMUSG00000024146) #27 Pigf (ENSMUSG00000024145) #28 Rhoq (ENSMUSG00000024143) #29 Atp6v1e2 (ENSMUSG00000053375) #30 Tmem247 (ENSMUSG00000037689) #31 Epas1 (ENSMUSG00000024140) Prkce (ENSMUSG00000045038) #32 Srbd1 (ENSMUSG00000024135) #33 Six2 (ENSMUSG00000024134) #34 Six3 (ENSMUSG00000038805) #35 Camkmt (ENSMUSG00000071037) #36 Ryukyu mouse MODERN SPECIES 8 Mettl4 (MGP_CAROLIEiJ_G0021963) Adcyap1 (MGP_CAROLIEiJ_G0021962) MGP_CAROLIEiJ_G0021961 Nrxn1 (MGP_CAROLIEiJ_G0021959) #10 Fshr (MGP_CAROLIEiJ_G0021958) #12 Lhcgr (MGP_CAROLIEiJ_G0021957) #13 Gtf2a1l (MGP_CAROLIEiJ_G0021956) MGP_CAROLIEiJ_G0021955 #14 Ppp1r21 (MGP_CAROLIEiJ_G0021954) #15 Foxn2 (MGP_CAROLIEiJ_G0021953) #16 Fbxo11 (MGP_CAROLIEiJ_G0021952) #17 Msh6 (MGP_CAROLIEiJ_G0021951) #18 Kcnk12 (MGP_CAROLIEiJ_G0021950) #19 Msh2 (MGP_CAROLIEiJ_G0021949) #20 Epcam (MGP_CAROLIEiJ_G0021948) #21 Calm2 (MGP_CAROLIEiJ_G0021947) #22 Stpg4 (MGP_CAROLIEiJ_G0021946) #23 Ttc7 (MGP_CAROLIEiJ_G0021945) #24 Mcfd2 (MGP_CAROLIEiJ_G0021944) #25 Socs5 (MGP_CAROLIEiJ_G0021943) #26 Cript (MGP_CAROLIEiJ_G0021942) #27 Pigf (MGP_CAROLIEiJ_G0021941) #28 Rhoq (MGP_CAROLIEiJ_G0021940) #29 Atp6v1e2 (MGP_CAROLIEiJ_G0021939) #30 Tmem247 (MGP_CAROLIEiJ_G0021938) #31 Epas1 (MGP_CAROLIEiJ_G0021937) MGP_CAROLIEiJ_G0021936 Prkce (MGP_CAROLIEiJ_G0021935) #32 Srbd1 (MGP_CAROLIEiJ_G0021934) #33 Six2 (MGP_CAROLIEiJ_G0021933) #34 Six3 (MGP_CAROLIEiJ_G0021932) #35 Mus_A ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.db #22 Mus_B ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.db #22 Mus_C ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.db #22 Steppe mouse MODERN SPECIES 2223 ENSMSIG00000002724 #22 ENSMSIG00000002707 Tspan7 (ENSMSIG00000002659) Rat DUPLICATION Rat MODERN SPECIES 16 ENSRNOG00000069544 ENSRNOG00000070393 ENSRNOG00000070800 Fshr (ENSRNOG00000016783) #12 Lhcgr (ENSRNOG00000016712) #13 Gtf2a1l (ENSRNOG00000016703) Ston1 (ENSRNOG00000016688) #14 Ppp1r21 (ENSRNOG00000016528) #15 Foxn2 (ENSRNOG00000040110) #16 H2az1-ps2 (ENSRNOG00000031564) Fbxo11 (ENSRNOG00000016396) #17 Msh6 (ENSRNOG00000016134) #18 Kcnk12 (ENSRNOG00000016110) #19 Msh2 (ENSRNOG00000015796) #20 Epcam (ENSRNOG00000015667) #21 Calm2 (ENSRNOG00000067086) #22 Stpg4 (ENSRNOG00000040136) #23 Ttc7a (ENSRNOG00000014879) #24 Mcfd2 (ENSRNOG00000015059) #25 Socs5 (ENSRNOG00000028504) #26 Cript (ENSRNOG00000015215) #27 Pigf (ENSRNOG00000015325) #28 Atp6v1e2 (ENSRNOG00000015566) #30 Tmem247 (ENSRNOG00000046926) #31 Epas1 (ENSRNOG00000021318) Prkce (ENSRNOG00000015603) #32 Srbd1 (ENSRNOG00000014720) #33 Six2 (ENSRNOG00000068029) #34 Six3 (ENSRNOG00000057031) #35 Camkmt (ENSRNOG00000030629) #36 Prepl (ENSRNOG00000007326) #37 Rat MODERN SPECIES 6 Klhl1 (ENSRNOG00000031100) Spertl (ENSRNOG00000031449) Pcdh9 (ENSRNOG00000038068) ENSRNOG00000062952 LOC498555 (ENSRNOG00000038074) ENSRNOG00000069953 Pcdh20 (ENSRNOG00000013306) ENSRNOG00000065303 Tdrd3 (ENSRNOG00000009034) Diaph3 (ENSRNOG00000008986) AABR07018556.1 (ENSRNOG00000049650) AABR07018132.1 (ENSRNOG00000045597) Pcdh17 (ENSRNOG00000008970) AABR07018646.1 (ENSRNOG00000033366) AABR07018627.1 (ENSRNOG00000038122) Calm2 (ENSRNOG00000030871) #22 LOC100361180 (ENSRNOG00000048927) LOC306079 (ENSRNOG00000031061) Olfm4 (ENSRNOG00000013280) Pcdh8 (ENSRNOG00000013101) Cnmd (ENSRNOG00000012821) AC123280.1 (ENSRNOG00000033141) ENSRNOG00000029808 Sugt1 (ENSRNOG00000012594) Elf1 (ENSRNOG00000011762) Wbp4 (ENSRNOG00000011678) Kbtbd6 (ENSRNOG00000011657) Kbtbd7 (ENSRNOG00000064764) Mtrf1 (ENSRNOG00000047106) Naa16 (ENSRNOG00000045863) ENSRNOG00000067430 Upper Galilee mountains blind mole rat MODERN SPECIES 1826 ENSNGAG00000009682 Nrxn1 (ENSNGAG00000017496) #10 Fshr (ENSNGAG00000020967) #12 Lhcgr (ENSNGAG00000021653) #13 Gtf2a1l (ENSNGAG00000016933) Ston1 (ENSNGAG00000014271) #14 Ppp1r21 (ENSNGAG00000020731) #15 Foxn2 (ENSNGAG00000015470) #16 ENSNGAG00000022377 Fbxo11 (ENSNGAG00000017830) #17 ENSNGAG00000009050 #18 ENSNGAG00000020513 Kcnk12 (ENSNGAG00000011927) #19 Msh2 (ENSNGAG00000020810) #20 Epcam (ENSNGAG00000012351) #21 Calm2 (ENSNGAG00000020613) #22 Stpg4 (ENSNGAG00000023496) #23 Ttc7 (ENSNGAG00000020345) #24 Mcfd2 (ENSNGAG00000020905) #25 Socs5 (ENSNGAG00000021811) #26 Cript (ENSNGAG00000021623) ##27 Pigf (ENSNGAG00000014181) #28 Rhoq (ENSNGAG00000021179) #29 Tmem247 (ENSNGAG00000014461) #31 Epas1 (ENSNGAG00000023700) Prkce (ENSNGAG00000007204) #32 Srbd1 (ENSNGAG00000011893) #33 Six2 (ENSNGAG00000021038) #34 Six3 (ENSNGAG00000012779) #35 Camkmt (ENSNGAG00000021314) #36 Prepl (ENSNGAG00000015017) #37 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00390000007723 ENSGT00530000063603.B #7 ENSGT00900000143213 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00390000002168 #36 Pika MODERN SPECIES 3823 CALM2 (ENSOPRG00000015478) #22 ENSOPRG00000015465 #23 TTC7A (ENSOPRG00000015428) #24 MCFD2 (ENSOPRG00000015423) #25 Rabbit MODERN SPECIES 11 GTF2A1L (ENSOCUG00000034645) STON1 (ENSOCUG00000006982) #14 PPP1R21 (ENSOCUG00000006967) #15 ENSOCUG00000012631 FOXN2 (ENSOCUG00000009784) #16 ENSOCUG00000033049 ENSOCUG00000031844 ENSOCUG00000037389 ENSOCUG00000034738 ENSOCUG00000024873 FBXO11 (ENSOCUG00000014631) #17 MSH6 (ENSOCUG00000014615) #18 KCNK12 (ENSOCUG00000021648) #19 MSH2 (ENSOCUG00000009576) #20 EPCAM (ENSOCUG00000006223) #21 CALM2 (ENSOCUG00000002107) #22 STPG4 (ENSOCUG00000002103) #23 TTC7A (ENSOCUG00000007788) #24 ENSOCUG00000007785 #25 CRIPT (ENSOCUG00000009711) #27 ENSOCUG00000001130 #28 ENSOCUG00000001127 #29 ATP6V1E2 (ENSOCUG00000021835) #30 TMEM247 (ENSOCUG00000028184) #31 ENSOCUG00000031233 EPAS1 (ENSOCUG00000014904) ENSOCUG00000036650 PRKCE (ENSOCUG00000013785) #32 SRBD1 (ENSOCUG00000015385) #33 SIX2 (ENSOCUG00000027205) #34 CAMKMT (ENSOCUG00000005476) #36 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Suina ANCESTRAL SPECIES 13 ENSGT00390000007723 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Pig MODERN SPECIES 11 ENSSSCG00000048824 FSHR (ENSSSCG00000029084) #12 LHCGR (ENSSSCG00000008421) #13 ENSSSCG00000053929 GTF2A1L (ENSSSCG00000033106) STON1 (ENSSSCG00000057606) #14 PPP1R21 (ENSSSCG00000008423) #15 FOXN2 (ENSSSCG00000029593) #16 ENSSSCG00000058673 FBXO11 (ENSSSCG00000029485) #17 MSH6 (ENSSSCG00000020931) #18 KCNK12 (ENSSSCG00000062991) #19 ENSSSCG00000052201 MSH2 (ENSSSCG00000008428) #20 EPCAM (ENSSSCG00000008429) #21 CALM2 (ENSSSCG00000008433) #22 STPG4 (ENSSSCG00000063378) #23 ENSSSCG00000038396 TTC7A (ENSSSCG00000008434) #24 MCFD2 (ENSSSCG00000021325) #25 SOCS5 (ENSSSCG00000008437) #26 PIGF (ENSSSCG00000008440) #28 ENSSSCG00000045356 RHOQ (ENSSSCG00000031261) #29 ATP6V1E2 (ENSSSCG00000008441) #30 EPAS1 (ENSSSCG00000008443) PRKCE (ENSSSCG00000008444) #32 SRBD1 (ENSSSCG00000008445) #33 ENSSSCG00000047564 SIX2 (ENSSSCG00000008446) #34 SIX3 (ENSSSCG00000039283) #35 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 781 TCF25 (ENSCWAG00000012405) MC1R (ENSCWAG00000012462) ENSCWAG00000007828 DEF8 (ENSCWAG00000007933) ENSCWAG00000008273 DBNDD1 (ENSCWAG00000008303) GAS8 (ENSCWAG00000008385) ENSCWAG00000008439 PRDM7 (ENSCWAG00000008502) ENSCWAG00000008617 ENSCWAG00000008677 ENSCWAG00000008728 ENSCWAG00000008739 ENSCWAG00000008751 ENSCWAG00000008788 ENSCWAG00000008818 #22 PSD3 (ENSCWAG00000008881) ENSCWAG00000009226 ENSCWAG00000009269 SH2D4A (ENSCWAG00000009316) CSGALNACT1 (ENSCWAG00000009405) INTS10 (ENSCWAG00000009456) HGSNAT (ENSCWAG00000009652) POMK (ENSCWAG00000009811) FNTA (ENSCWAG00000009849) HOOK3 (ENSCWAG00000009935) RNF170 (ENSCWAG00000010098) THAP1 (ENSCWAG00000010165) CHRNB3 (ENSCWAG00000010206) SMIM19 (ENSCWAG00000010270) SLC20A2 (ENSCWAG00000010306) Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 777 CHAC2 (ENSCWAG00000009439) #9 ASB3 (ENSCWAG00000009257) #8 ENSCWAG00000009228 NRXN1 (ENSCWAG00000005409) #10 FSHR (ENSCWAG00000005119) #12 LHCGR (ENSCWAG00000004817) #13 GTF2A1L (ENSCWAG00000004721) STON1 (ENSCWAG00000004671) #14 PPP1R21 (ENSCWAG00000004171) #15 FOXN2 (ENSCWAG00000004088) #16 FBXO11 (ENSCWAG00000004007) #17 MSH6 (ENSCWAG00000003923) #18 KCNK12 (ENSCWAG00000003900) #19 MSH2 (ENSCWAG00000003791) #20 EPCAM (ENSCWAG00000003750) #21 ENSCWAG00000003668 #22 STPG4 (ENSCWAG00000019847) #23 TTC7A (ENSCWAG00000019747) #24 ENSCWAG00000019718 #25 SOCS5 (ENSCWAG00000019711) #26 CRIPT (ENSCWAG00000019698) #27 PIGF (ENSCWAG00000019656) #28 RHOQ (ENSCWAG00000019635) #29 ATP6V1E2 (ENSCWAG00000019622) #30 TMEM247 (ENSCWAG00000019607) #31 EPAS1 (ENSCWAG00000019576) PRKCE (ENSCWAG00000019484) #32 SRBD1 (ENSCWAG00000019384) #33 SIX2 (ENSCWAG00000019362) #34 SIX3 (ENSCWAG00000019346) #35 CAMKMT (ENSCWAG00000019295) #36 Chacoan peccary MODERN SPECIES 945 ATG3 (ENSCWAG00000018871) SLC35A5 (ENSCWAG00000018855) CCDC80 (ENSCWAG00000018826) GTPBP8 (ENSCWAG00000018758) NEPRO (ENSCWAG00000018742) BOC (ENSCWAG00000018706) CFAP44 (ENSCWAG00000018428) SPICE1 (ENSCWAG00000018337) SIDT1 (ENSCWAG00000018049) ENSCWAG00000018016 USF3 (ENSCWAG00000017979) NAA50 (ENSCWAG00000017862) ATP6V1A (ENSCWAG00000017815) GRAMD1C (ENSCWAG00000017575) ZDHHC23 (ENSCWAG00000017459) ENSCWAG00000017412 #22 CCDC191 (ENSCWAG00000016708) QTRT2 (ENSCWAG00000016480) DRD3 (ENSCWAG00000016368) TIGIT (ENSCWAG00000016293) ENSCWAG00000016279 ZBTB20 (ENSCWAG00000016245) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Camelidae ANCESTRAL SPECIES 12 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Arabian camel MODERN SPECIES 6 CHAC2 (ENSCDRG00005022396) #9 ASB3 (ENSCDRG00005022394) #8 NRXN1 (ENSCDRG00005022389) #10 FSHR (ENSCDRG00005022388) #12 LHCGR (ENSCDRG00005022386) #13 GTF2A1L (ENSCDRG00005022385) STON1 (ENSCDRG00005022383) #14 PPP1R21 (ENSCDRG00005022382) #15 FOXN2 (ENSCDRG00005022381) #16 ENSCDRG00005022380 FBXO11 (ENSCDRG00005022378) #17 MSH6 (ENSCDRG00005022377) #18 KCNK12 (ENSCDRG00005022375) #19 MSH2 (ENSCDRG00005022352) #20 EPCAM (ENSCDRG00005022333) #21 CALM2 (ENSCDRG00005022330) #22 STPG4 (ENSCDRG00005022325) #23 TTC7A (ENSCDRG00005022322) #24 MCFD2 (ENSCDRG00005022318) #25 SOCS5 (ENSCDRG00005022317) #26 CRIPT (ENSCDRG00005022315) #27 PIGF (ENSCDRG00005022312) #28 RHOQ (ENSCDRG00005022309) #29 ATP6V1E2 (ENSCDRG00005022308) #30 TMEM247 (ENSCDRG00005022306) #31 EPAS1 (ENSCDRG00005022302) PRKCE (ENSCDRG00005022256) #32 SRBD1 (ENSCDRG00005022191) #33 SIX2 (ENSCDRG00005022173) #34 SIX3 (ENSCDRG00005022157) #35 CAMKMT (ENSCDRG00005022120) #36 Alpaca MODERN SPECIES 1491 CALM2 (ENSVPAG00000009286) #22 STPG4 (ENSVPAG00000009280) #23 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Cetacea ANCESTRAL SPECIES 16 ENSGT00940000159080 #8 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00390000003248.a.a.b.c.a ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01060000249326 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000153311.a.b.a.i.a ENSGT00940000158292.a #34 Blue whale MODERN SPECIES 4 ERLEC1 (ENSBMSG00010020317) #7 CHAC2 (ENSBMSG00010020397) #9 NRXN1 (ENSBMSG00010020610) #10 FSHR (ENSBMSG00010021830) #12 LHCGR (ENSBMSG00010021848) #13 GTF2A1L (ENSBMSG00010021873) STON1 (ENSBMSG00010021880) #14 PPP1R21 (ENSBMSG00010021894) #15 FOXN2 (ENSBMSG00010021911) #16 FBXO11 (ENSBMSG00010021915) #17 MSH6 (ENSBMSG00010021923) #18 KCNK12 (ENSBMSG00010011727) #19 MSH2 (ENSBMSG00010011772) #20 EPCAM (ENSBMSG00010011820) #21 ENSBMSG00010011835 CALM2 (ENSBMSG00010011851) #22 STPG4 (ENSBMSG00010011867) #23 TTC7A (ENSBMSG00010011891) #24 MCFD2 (ENSBMSG00010011931) #25 SOCS5 (ENSBMSG00010011946) #26 CRIPT (ENSBMSG00010011952) #27 PIGF (ENSBMSG00010011960) #28 ENSBMSG00010011969 #29 ATP6V1E2 (ENSBMSG00010011978) #30 TMEM247 (ENSBMSG00010011983) #31 ENSBMSG00010011993 ENSBMSG00010012008 PRKCE (ENSBMSG00010012019) #32 SRBD1 (ENSBMSG00010012055) #33 ENSBMSG00010012072 SIX2 (ENSBMSG00010012083) #34 Odontoceti ANCESTRAL SPECIES 15 ENSGT00940000159080 #8 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00390000003248.a.a.b.c.a ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01060000249326.a ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000153311.a.b.a.i.a ENSGT00940000158292.a #34 Sperm whale MODERN SPECIES 3 ASB3 (ENSPCTG00005017506) #8 ENSPCTG00005017492 NRXN1 (ENSPCTG00005014692) #10 FSHR (ENSPCTG00005014365) #12 LHCGR (ENSPCTG00005013644) #13 GTF2A1L (ENSPCTG00005013351) STON1 (ENSPCTG00005013286) #14 PPP1R21 (ENSPCTG00005013035) #15 FOXN2 (ENSPCTG00005012938) #16 FBXO11 (ENSPCTG00005012807) #17 MSH6 (ENSPCTG00005012642) #18 KCNK12 (ENSPCTG00005012592) #19 MSH2 (ENSPCTG00005012352) #20 EPCAM (ENSPCTG00005012231) #21 ENSPCTG00005012212 CALM3 (ENSPCTG00005012107) #22 STPG4 (ENSPCTG00005012076) #23 TTC7A (ENSPCTG00005012058) #24 MCFD2 (ENSPCTG00005011960) #25 SOCS5 (ENSPCTG00005011939) #26 ENSPCTG00005011927 #26 CRIPT (ENSPCTG00005011891) #27 PIGF (ENSPCTG00005011831) #28 RHOQ (ENSPCTG00005011755) #29 ATP6V1E2 (ENSPCTG00005011740) #30 TMEM247 (ENSPCTG00005011702) #31 EPAS1 (ENSPCTG00005011633) ENSPCTG00005011606 #32 ENSPCTG00005011576 #32 ENSPCTG00005011534 ENSPCTG00005011448 Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00940000159080 #8 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00390000003248.a.a.b.c.a ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01060000249326.a ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000153311.a.b.a.i.a ENSGT00940000158292.a #34 Dolphin MODERN SPECIES 2204 CALM2 (ENSTTRG00000012026) #22 STPG4 (ENSTTRG00000012024) #23 TTC7A (ENSTTRG00000012021) #24 MCFD2 (ENSTTRG00000012017) #25 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00940000159080 #8 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00390000003248.a.a.b.c.a ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01060000249326.a ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000153311.a.b.a.i.a ENSGT00940000158292.a #34 Vaquita MODERN SPECIES 4 ENSPSNG00000013411 ENSPSNG00000013363 NRXN1 (ENSPSNG00000011177) #10 FSHR (ENSPSNG00000010658) #12 LHCGR (ENSPSNG00000010226) #13 GTF2A1L (ENSPSNG00000009974) STON1 (ENSPSNG00000010101) #14 PPP1R21 (ENSPSNG00000009787) #15 FOXN2 (ENSPSNG00000009685) #16 FBXO11 (ENSPSNG00000009596) #17 MSH6 (ENSPSNG00000009454) #18 KCNK12 (ENSPSNG00000009311) #19 MSH2 (ENSPSNG00000009243) #20 EPCAM (ENSPSNG00000009186) #21 ENSPSNG00000009132 CALM2 (ENSPSNG00000009077) #22 STPG4 (ENSPSNG00000008945) #23 TTC7A (ENSPSNG00000008809) #24 MCFD2 (ENSPSNG00000008747) #25 SOCS5 (ENSPSNG00000008716) #26 ENSPSNG00000008692 CRIPT (ENSPSNG00000008658) #27 PIGF (ENSPSNG00000008639) #28 ENSPSNG00000008605 #29 ATP6V1E2 (ENSPSNG00000008582) #30 TMEM247 (ENSPSNG00000008541) #31 EPAS1 (ENSPSNG00000008475) PRKCE (ENSPSNG00000008404) #32 SRBD1 (ENSPSNG00000007161) #33 SIX2 (ENSPSNG00000006741) #34 SIX3 (ENSPSNG00000006724) #35 Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000185154 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00390000003248.a.a.b.c.a ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01060000249326.a ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000153311.a.b.a.i.a ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 37 NRXN1 (ENSDLEG00000000435) ENSDLEG00000000480 ENSDLEG00000000494 FSHR (ENSDLEG00000000519) #12 GTF2A1L (ENSDLEG00000000559) LHCGR (ENSDLEG00000000631) #13 STON1 (ENSDLEG00000000689) #14 PPP1R21 (ENSDLEG00000000735) #15 FOXN2 (ENSDLEG00000000878) #16 ENSDLEG00000000900 FBXO11 (ENSDLEG00000000914) #17 MSH6 (ENSDLEG00000000971) #18 KCNK12 (ENSDLEG00000001009) #19 MSH2 (ENSDLEG00000001025) #20 EPCAM (ENSDLEG00000001072) #21 CALM1 (ENSDLEG00000001123) #22 STPG4 (ENSDLEG00000001137) #23 TTC7A (ENSDLEG00000001168) #24 MCFD2 (ENSDLEG00000001257) #25 SOCS5 (ENSDLEG00000001265) #26 PIGF (ENSDLEG00000001279) #28 ENSDLEG00000001287 #29 ENSDLEG00000001298 TMEM247 (ENSDLEG00000001306) #31 EPAS1 (ENSDLEG00000001332) PRKCE (ENSDLEG00000001423) #32 ENSDLEG00000001482 SRBD1 (ENSDLEG00000001500) #33 ENSDLEG00000001522 SIX2 (ENSDLEG00000001538) #34 SIX3 (ENSDLEG00000001550) #35 Beluga whale MODERN SPECIES 28 ENSDLEG00000007271 CHL1 (ENSDLEG00000007131) CNTN6 (ENSDLEG00000004824) ENSDLEG00000004457 CNTN4 (ENSDLEG00000004410) IL5RA (ENSDLEG00000004345) TRNT1 (ENSDLEG00000004312) CRBN (ENSDLEG00000004288) LRRN1 (ENSDLEG00000004270) ENSDLEG00000004264 SUMF1 (ENSDLEG00000004213) ITPR1 (ENSDLEG00000003511) BHLHE40 (ENSDLEG00000003345) ARL8B (ENSDLEG00000003337) EDEM1 (ENSDLEG00000003247) ENSDLEG00000003215 #22 Narwhal DUPLICATION Narwhal MODERN SPECIES 305 NRXN1 (ENSMMNG00015010769) #10 ENSMMNG00015011190 ENSMMNG00015011204 FSHR (ENSMMNG00015011225) #12 LHCGR (ENSMMNG00015011283) #13 GTF2A1L (ENSMMNG00015011353) STON1 (ENSMMNG00015011373) #14 PPP1R21 (ENSMMNG00015011420) #15 FOXN2 (ENSMMNG00015011506) #16 FBXO11 (ENSMMNG00015011536) #17 MSH6 (ENSMMNG00015011587) #18 KCNK12 (ENSMMNG00015011625) #19 MSH2 (ENSMMNG00015011643) #20 EPCAM (ENSMMNG00015011682) #21 ENSMMNG00015011701 CALM2 (ENSMMNG00015011714) #22 STPG4 (ENSMMNG00015011734) #23 TTC7A (ENSMMNG00015011753) #24 MCFD2 (ENSMMNG00015011799) #25 SOCS5 (ENSMMNG00015011854) #26 CRIPT (ENSMMNG00015011859) #27 PIGF (ENSMMNG00015011874) #28 ENSMMNG00015011892 #29 TMEM247 (ENSMMNG00015011931) #31 EPAS1 (ENSMMNG00015011953) ENSMMNG00015011999 PRKCE (ENSMMNG00015012023) #32 SRBD1 (ENSMMNG00015012057) #33 ENSMMNG00015012089 SIX2 (ENSMMNG00015012101) #34 SIX3 (ENSMMNG00015012109) #35 Narwhal MODERN SPECIES 310 CNTN3 (ENSMMNG00015020954) ENSMMNG00015020993 CHL1 (ENSMMNG00015021112) CNTN6 (ENSMMNG00015021308) ENSMMNG00015021339 CNTN4 (ENSMMNG00015021354) IL5RA (ENSMMNG00015021373) TRNT1 (ENSMMNG00015021404) CRBN (ENSMMNG00015021425) LRRN1 (ENSMMNG00015021441) ENSMMNG00015021455 SUMF1 (ENSMMNG00015021480) ITPR1 (ENSMMNG00015021764) BHLHE40 (ENSMMNG00015021940) EDEM1 (ENSMMNG00015021945) ENSMMNG00015021948 #22 GRM7 (ENSMMNG00015021949) ENSMMNG00015021951 LMCD1 (ENSMMNG00015021953) SSUH2 (ENSMMNG00015021955) CAV3 (ENSMMNG00015021970) OXTR (ENSMMNG00015021973) RAD18 (ENSMMNG00015021977) SRGAP3 (ENSMMNG00015021982) THUMPD3 (ENSMMNG00015021984) SETD5 (ENSMMNG00015009941) ENSMMNG00015010075 MTMR14 (ENSMMNG00015010221) CPNE9 (ENSMMNG00015010323) BRPF1 (ENSMMNG00015010418) OGG1 (ENSMMNG00015010484) Pecora ANCESTRAL SPECIES 5 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Percora_a ANCESTRAL SPECIES 13 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.t #25 ENSGT00940000154141.B.s #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 243 NRXN1 (ENSMMSG00000004682) #10 FSHR (ENSMMSG00000008638) #12 LHCGR (ENSMMSG00000008813) #13 GTF2A1L (ENSMMSG00000009159) STON1 (ENSMMSG00000009347) #14 PPP1R21 (ENSMMSG00000009439) #15 FOXN2 (ENSMMSG00000009580) #16 ENSMMSG00000009637 ENSMMSG00000009665 FBXO11 (ENSMMSG00000009698) #17 MSH6 (ENSMMSG00000009764) #18 KCNK12 (ENSMMSG00000009891) #19 ENSMMSG00000009925 #20 EPCAM (ENSMMSG00000010033) #21 ENSMMSG00000010072 CALM2 (ENSMMSG00000010115) #22 STPG4 (ENSMMSG00000010164) #23 TTC7A (ENSMMSG00000010218) #24 MCFD2 (ENSMMSG00000010275) #25 ENSMMSG00000010348 SOCS5 (ENSMMSG00000010366) #26 CRIPT (ENSMMSG00000010380) #27 PIGF (ENSMMSG00000010411) #28 RHOQ (ENSMMSG00000010463) #29 ATP6V1E2 (ENSMMSG00000010493) #30 TMEM247 (ENSMMSG00000010509) #31 EPAS1 (ENSMMSG00000010543) ENSMMSG00000010613 PRKCE (ENSMMSG00000010644) #32 SRBD1 (ENSMMSG00000010782) #33 ENSMMSG00000010889 Siberian musk deer MODERN SPECIES 1158 VWC2 (ENSMMSG00000021801) ENSMMSG00000021787 ENSMMSG00000021773 #22 ABCA13 (ENSMMSG00000021204) UPP1 (ENSMMSG00000021105) C7orf57 (ENSMMSG00000021077) SUN3 (ENSMMSG00000021005) CLDN12 (ENSMMSG00000020990) ENSMMSG00000020983 CDK14 (ENSMMSG00000020826) FZD1 (ENSMMSG00000020757) MTERF1 (ENSMMSG00000020744) AKAP9 (ENSMMSG00000020281) CYP51A1 (ENSMMSG00000020171) LRRD1 (ENSMMSG00000020133) KRIT1 (ENSMMSG00000020021) ANKIB1 (ENSMMSG00000019956) ENSMMSG00000019923 Bovidae ANCESTRAL SPECIES 5 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.s #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Caprinae ANCESTRAL SPECIES 9 ENSGT00940000154292.a.b #10 ENSGT00900000143213 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00950000183210.d.a.c.a.a.b.f.a.a.b.b ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.s #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.i.a.b ##27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Goat MODERN SPECIES 2 ENSCHIG00000023509 ENSCHIG00000021404 FSHR (ENSCHIG00000023353) #12 LHCGR (ENSCHIG00000005935) #13 GTF2A1L (ENSCHIG00000019307) STON1 (ENSCHIG00000013272) #14 ENSCHIG00000022262 PPP1R21 (ENSCHIG00000018575) #15 FOXN2 (ENSCHIG00000025720) #16 ENSCHIG00000011530 FBXO11 (ENSCHIG00000024805) #17 MSH6 (ENSCHIG00000014129) #18 KCNK12 (ENSCHIG00000009025) #19 MSH2 (ENSCHIG00000021960) #20 EPCAM (ENSCHIG00000022999) #21 CALM2 (ENSCHIG00000011230) #22 STPG4 (ENSCHIG00000010209) #23 TTC7A (ENSCHIG00000026586) #24 MCFD2 (ENSCHIG00000021334) #25 SOCS5 (ENSCHIG00000002578) #26 ENSCHIG00000024753 ##27 PIGF (ENSCHIG00000015763) #28 RHOQ (ENSCHIG00000002963) #29 ATP6V1E2 (ENSCHIG00000002972) #30 TMEM247 (ENSCHIG00000024767) #31 EPAS1 (ENSCHIG00000016866) PRKCE (ENSCHIG00000018225) #32 ENSCHIG00000025999 #32 SRBD1 (ENSCHIG00000016535) #33 SIX2 (ENSCHIG00000010396) #34 SIX3 (ENSCHIG00000010414) #35 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020013635 ENSOARG00020013715 ENSOARG00020013950 ENSOARG00020016060 ENSOARG00020016142 ENSOARG00020016176 ENSOARG00020016311 ENSOARG00020016510 ENSOARG00020017398 ENSOARG00020020451 ENSOARG00020021654 ENSOARG00020021773 PEX5 (ENSOARG00020021853) CLSTN3 (ENSOARG00020022163) RBP5 (ENSOARG00020022272) ENSOARG00020022365 #22 C1R (ENSOARG00020022383) C1S (ENSOARG00020022422) LPCAT3 (ENSOARG00020022475) EMG1 (ENSOARG00020022522) PHB2 (ENSOARG00020022553) PTPN6 (ENSOARG00020022658) C12orf57 (ENSOARG00020022731) ATN1 (ENSOARG00020022792) ENO2 (ENSOARG00020022863) LRRC23 (ENSOARG00020023167) SPSB2 (ENSOARG00020023215) TPI1 (ENSOARG00020023229) USP5 (ENSOARG00020023279) CDCA3 (ENSOARG00020023351) GNB3 (ENSOARG00020023409) Rambouillet Sheep MODERN SPECIES 19 FSHR (ENSOARG00020003107) #12 ENSOARG00020003239 LHCGR (ENSOARG00020003269) #13 GTF2A1L (ENSOARG00020003448) STON1 (ENSOARG00020003561) #14 PPP1R21 (ENSOARG00020003660) #15 ENSOARG00020004435 FOXN2 (ENSOARG00020004450) #16 ENSOARG00020004540 ENSOARG00020004545 FBXO11 (ENSOARG00020004568) #17 MSH6 (ENSOARG00020004740) #18 KCNK12 (ENSOARG00020004920) #19 MSH2 (ENSOARG00020004936) #20 EPCAM (ENSOARG00020005022) #21 CALM2 (ENSOARG00020005091) #22 STPG4 (ENSOARG00020005136) #23 TTC7A (ENSOARG00020005170) #24 ENSOARG00020005365 #25 SOCS5 (ENSOARG00020005421) #26 PIGF (ENSOARG00020005433) #28 ATP6V1E2 (ENSOARG00020005477) #30 TMEM247 (ENSOARG00020005490) #31 EPAS1 (ENSOARG00020005535) PRKCE (ENSOARG00020005680) #32 SRBD1 (ENSOARG00020005756) #33 ENSOARG00020005868 SIX2 (ENSOARG00020005887) #34 SIX3 (ENSOARG00020005903) #35 CAMKMT (ENSOARG00020005931) #36 PREPL (ENSOARG00020005995) #37 Bovinae ANCESTRAL SPECIES 4 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000153431.a.l.a ENSGT00940000163627 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.t.a #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00940000153311.a.b.a.j.b ENSGT00960000190610 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 American bison MODERN SPECIES 3029 FBXO11 (ENSBBBG00000006556) #17 MSH6 (ENSBBBG00000024950) #18 KCNK12 (ENSBBBG00000006590) #19 MSH2 (ENSBBBG00000025025) #20 EPCAM (ENSBBBG00000025114) #21 CALM2 (ENSBBBG00000008250) #22 STPG4 (ENSBBBG00000025185) #23 TTC7A (ENSBBBG00000025356) #24 ENSBBBG00000006742 #25 SOCS5 (ENSBBBG00000025463) #26 CRIPT (ENSBBBG00000025506) #27 PIGF (ENSBBBG00000011263) #28 RHOQ (ENSBBBG00000008279) #29 ATP6V1E2 (ENSBBBG00000008438) #30 TMEM247 (ENSBBBG00000011296) #31 EPAS1 (ENSBBBG00000002058) PRKCE (ENSBBBG00000011327) #32 ENSBBBG00000011335 ENSBBBG00000011339 SRBD1 (ENSBBBG00000011355) #33 SIX2 (ENSBBBG00000011363) #34 Bos ANCESTRAL SPECIES 5 ENSGT00940000159080 #8 ENSGT00940000153431.a.l.a ENSGT00940000163627 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.t.a #25 ENSGT00940000154141.B.s.a.a #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01100000263480.a.b.a.b.b.a.a.b ENSGT00940000154711 #32 ENSGT00940000153311.a.b.a.j.b ENSGT00960000190610 Bos_a ANCESTRAL SPECIES 6 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.t.a #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01100000263480.a.b.a.b.b.a.a.b ENSGT00940000154711 #32 ENSGT00940000153311.a.b.a.j.b ENSGT00960000190610 ENSGT00510000047850 #33 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 28 ENSBGRG00000013820 NRXN1 (ENSBGRG00000012349) #10 FSHR (ENSBGRG00000011870) #12 LHCGR (ENSBGRG00000011219) #13 ENSBGRG00000011163 GTF2A1L (ENSBGRG00000010808) STON1 (ENSBGRG00000010690) #14 PPP1R21 (ENSBGRG00000010524) #15 FOXN2 (ENSBGRG00000010377) #16 ENSBGRG00000010333 FBXO11 (ENSBGRG00000009485) #17 MSH6 (ENSBGRG00000009341) #18 KCNK12 (ENSBGRG00000009326) #19 MSH2 (ENSBGRG00000009226) #20 EPCAM (ENSBGRG00000009151) #21 ENSBGRG00000008892 #22 STPG4 (ENSBGRG00000008758) #23 TTC7A (ENSBGRG00000008011) #24 ENSBGRG00000007812 #25 ENSBGRG00000007793 ENSBGRG00000007776 SOCS5 (ENSBGRG00000007750) #26 CRIPT (ENSBGRG00000007691) #27 PIGF (ENSBGRG00000007547) #28 RHOQ (ENSBGRG00000007471) #29 ATP6V1E2 (ENSBGRG00000007445) #30 TMEM247 (ENSBGRG00000007384) #31 EPAS1 (ENSBGRG00000006847) ENSBGRG00000006802 PRKCE (ENSBGRG00000006634) #32 ENSBGRG00000006602 #32 Domestic yak MODERN SPECIES 12 ENSBGRG00000015316 FFAR1 (ENSBGRG00000015331) CD22 (ENSBGRG00000015347) MAG (ENSBGRG00000015461) ENSBGRG00000015791 HAMP (ENSBGRG00000015883) USF2 (ENSBGRG00000015949) LSR (ENSBGRG00000016208) FAM187B (ENSBGRG00000016484) FXYD5 (ENSBGRG00000016874) ENSBGRG00000016572 LGI4 (ENSBGRG00000016918) FXYD3 (ENSBGRG00000017097) HPN (ENSBGRG00000017548) GRAMD1A (ENSBGRG00000018150) ENSBGRG00000018925 #22 ZNF792 (ENSBGRG00000018941) ENSBGRG00000018999 ZNF599 (ENSBGRG00000019082) ENSBGRG00000019229 ENSBGRG00000019288 ENSBGRG00000019345 ENSBGRG00000019440 ENSBGRG00000019488 ENSBGRG00000019504 ENSBGRG00000019535 Wild yak MODERN SPECIES 748 FBXO11 (ENSBMUG00000005361) #17 MSH6 (ENSBMUG00000005336) #18 KCNK12 (ENSBMUG00000005315) #19 MSH2 (ENSBMUG00000005299) #20 EPCAM (ENSBMUG00000005286) #21 CALM2 (ENSBMUG00000005260) #22 STPG4 (ENSBMUG00000005229) #23 Bos_b ANCESTRAL SPECIES 9 ENSGT00940000153431.a.l.a ENSGT00940000163627 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.i.a.a.a ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B.t.a #25 ENSGT00940000154141.B.s.a.a #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT01100000263480.a.b.a.b.b.a.a.b ENSGT00940000154711 #32 ENSGT00940000153311.a.b.a.j.b ENSGT00960000190610 Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005019055 NRXN1 (ENSBIXG00005020353) #10 FSHR (ENSBIXG00005020542) #12 ENSBIXG00005007156 ENSBIXG00005020568 LHCGR (ENSBIXG00005020676) #13 GTF2A1L (ENSBIXG00005020773) STON1 (ENSBIXG00005020833) #14 PPP1R21 (ENSBIXG00005020937) #15 FOXN2 (ENSBIXG00005003545) #16 FBXO11 (ENSBIXG00005021079) #17 MSH6 (ENSBIXG00005021217) #18 KCNK12 (ENSBIXG00005021241) #19 MSH2 (ENSBIXG00005021319) #20 EPCAM (ENSBIXG00005003602) #21 CALM2 (ENSBIXG00005021412) #22 STPG4 (ENSBIXG00005021460) #23 TTC7A (ENSBIXG00005021493) #24 ENSBIXG00005021629 #25 SOCS5 (ENSBIXG00005021677) #26 CRIPT (ENSBIXG00005021712) #27 PIGF (ENSBIXG00005021758) #28 RHOQ (ENSBIXG00005007308) #29 TMEM247 (ENSBIXG00005021810) #31 EPAS1 (ENSBIXG00005021871) ENSBIXG00005021886 PRKCE (ENSBIXG00005021984) #32 ENSBIXG00005022019 ENSBIXG00005022031 ENSBIXG00005022043 SRBD1 (ENSBIXG00005006888) #33 Cow MODERN SPECIES 2 ENSBTAG00000052116 NRXN1 (ENSBTAG00000024021) #10 NRXN1 (ENSBTAG00000046199) #10 FSHR (ENSBTAG00000032424) #12 ENSBTAG00000027015 LHCGR (ENSBTAG00000016573) #13 GTF2A1L (ENSBTAG00000023999) STON1 (ENSBTAG00000004168) #14 PPP1R21 (ENSBTAG00000002570) #15 FOXN2 (ENSBTAG00000015151) #16 FBXO11 (ENSBTAG00000001425) #17 MSH6 (ENSBTAG00000001424) #18 KCNK12 (ENSBTAG00000017500) #19 MSH2 (ENSBTAG00000002742) #20 EPCAM (ENSBTAG00000006474) #21 CALM2 (ENSBTAG00000001575) #22 STPG4 (ENSBTAG00000049698) #23 TTC7A (ENSBTAG00000032558) #24 MCFD2 (ENSBTAG00000003358) #25 SOCS5 (ENSBTAG00000008987) #26 CRIPT (ENSBTAG00000015723) #27 PIGF (ENSBTAG00000015719) #28 RHOQ (ENSBTAG00000013749) #29 ATP6V1E2 (ENSBTAG00000013734) #30 TMEM247 (ENSBTAG00000004105) #31 EPAS1 (ENSBTAG00000003711) PRKCE (ENSBTAG00000020614) #32 ENSBTAG00000050580 #32 ENSBTAG00000032651 ENSBTAG00000050857 SRBD1 (ENSBTAG00000007508) #33 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Carnivora ANCESTRAL SPECIES 19 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Felidae ANCESTRAL SPECIES 3 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.a #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Panthera ANCESTRAL SPECIES 2 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.a #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c.a #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 leopard MODERN SPECIES ASB3 (ENSPPRG00000010985) #8 ENSPPRG00000011052 #10 ENSPPRG00000011805 FSHR (ENSPPRG00000011890) #12 LHCGR (ENSPPRG00000012894) #13 GTF2A1L (ENSPPRG00000013037) STON1 (ENSPPRG00000014094) #14 PPP1R21 (ENSPPRG00000016006) #15 FOXN2 (ENSPPRG00000017153) #16 FBXO11 (ENSPPRG00000019934) #17 MSH6 (ENSPPRG00000021052) #18 KCNK12 (ENSPPRG00000021838) #19 ENSPPRG00000022363 MSH2 (ENSPPRG00000022862) #20 ENSPPRG00000022685 #21 CALM2 (ENSPPRG00000000159) #22 STPG4 (ENSPPRG00000000369) #23 TTC7A (ENSPPRG00000000686) #24 ENSPPRG00000001506 #25 SOCS5 (ENSPPRG00000021153) #26 CRIPT (ENSPPRG00000001642) #27 PIGF (ENSPPRG00000001807) #28 RHOQ (ENSPPRG00000001907) #29 ATP6V1E2 (ENSPPRG00000021172) #30 TMEM247 (ENSPPRG00000002045) #31 EPAS1 (ENSPPRG00000002429) PRKCE (ENSPPRG00000002857) #32 SRBD1 (ENSPPRG00000003449) #33 SIX2 (ENSPPRG00000003512) #34 SIX3 (ENSPPRG00000003590) #35 CAMKMT (ENSPPRG00000003744) #36 Tiger MODERN SPECIES 205 FSHR (ENSPTIG00000004237) #12 LHCGR (ENSPTIG00000004359) #13 GTF2A1L (ENSPTIG00000005028) STON1 (ENSPTIG00000005123) #14 PPP1R21 (ENSPTIG00000005184) #15 FOXN2 (ENSPTIG00000005391) #16 FBXO11 (ENSPTIG00000005466) #17 MSH6 (ENSPTIG00000005826) #18 MSH2 (ENSPTIG00000005901) #20 EPCAM (ENSPTIG00000005967) #21 CALM2 (ENSPTIG00000006014) #22 STPG4 (ENSPTIG00000006038) #23 TTC7A (ENSPTIG00000006068) #24 MCFD2 (ENSPTIG00000006155) #25 SOCS5 (ENSPTIG00000008592) #26 CRIPT (ENSPTIG00000006259) #27 PIGF (ENSPTIG00000006267) #28 RHOQ (ENSPTIG00000006277) #29 Cat MODERN SPECIES 2 ERLEC1 (ENSFCAG00000013362) #7 CHAC2 (ENSFCAG00000022762) #9 ASB3 (ENSFCAG00000022032) #8 NRXN1 (ENSFCAG00000009031) #10 FSHR (ENSFCAG00000001215) #12 LHCGR (ENSFCAG00000009256) #13 GTF2A1L (ENSFCAG00000023357) STON1 (ENSFCAG00000009254) #14 PPP1R21 (ENSFCAG00000009251) #15 FOXN2 (ENSFCAG00000039724) #16 FBXO11 (ENSFCAG00000007090) #17 MSH6 (ENSFCAG00000007089) #18 KCNK12 (ENSFCAG00000044950) #19 MSH2 (ENSFCAG00000013448) #20 EPCAM (ENSFCAG00000013445) #21 CALM2 (ENSFCAG00000029141) #22 STPG4 (ENSFCAG00000006968) #23 TTC7A (ENSFCAG00000004961) #24 ENSFCAG00000034741 #25 SOCS5 (ENSFCAG00000000215) #26 CRIPT (ENSFCAG00000015610) #27 PIGF (ENSFCAG00000015609) #28 RHOQ (ENSFCAG00000033287) #29 ATP6V1E2 (ENSFCAG00000011593) #30 TMEM247 (ENSFCAG00000005136) #31 EPAS1 (ENSFCAG00000013629) PRKCE (ENSFCAG00000005102) #32 SRBD1 (ENSFCAG00000005101) #33 SIX2 (ENSFCAG00000029823) #34 SIX3 (ENSFCAG00000035168) #35 CAMKMT (ENSFCAG00000010753) #36 Caniformia ANCESTRAL SPECIES 18 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Mustelinae ANCESTRAL SPECIES 86 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 American mink MODERN SPECIES 146 CALM2 (ENSNVIG00000017405) #22 STPG4 (ENSNVIG00000017389) #23 TTC7A (ENSNVIG00000017339) #24 MCFD2 (ENSNVIG00000017307) #25 SOCS5 (ENSNVIG00000017294) #26 CRIPT (ENSNVIG00000017265) #27 PIGF (ENSNVIG00000017235) #28 RHOQ (ENSNVIG00000017224) #29 ATP6V1E2 (ENSNVIG00000017222) #30 TMEM247 (ENSNVIG00000017202) #31 EPAS1 (ENSNVIG00000017189) KPCE (ENSNVIG00000017149) #32 SRBD1 (ENSNVIG00000017107) #33 SIX2 (ENSNVIG00000017096) #34 SIX3 (ENSNVIG00000017078) #35 CAMKMT (ENSNVIG00000017006) #36 Ferret MODERN SPECIES 199 CREG2 (ENSMPUG00000012215) RNF149 (ENSMPUG00000012210) CNOT11 (ENSMPUG00000012207) TBC1D8 (ENSMPUG00000012202) ENSMPUG00000012197 NPAS2 (ENSMPUG00000012117) PDCL3 (ENSMPUG00000012114) NMS (ENSMPUG00000012109) ENSMPUG00000012108 CHST10 (ENSMPUG00000012105) LONRF2 (ENSMPUG00000012102) AFF3 (ENSMPUG00000012091) REV1 (ENSMPUG00000012079) EIF5B (ENSMPUG00000012068) TXNDC9 (ENSMPUG00000012065) CALM2 (ENSMPUG00000012061) #22 ENSMPUG00000012055 #23 TTC7A (ENSMPUG00000012045) #24 MCFD2 (ENSMPUG00000012043) #25 SOCS5 (ENSMPUG00000019927) #26 PIGF (ENSMPUG00000012037) #28 RHOQ (ENSMPUG00000012029) #29 ATP6V1E2 (ENSMPUG00000019926) #30 TMEM247 (ENSMPUG00000012023) #31 EPAS1 (ENSMPUG00000012019) PRKCE (ENSMPUG00000012014) #32 SRBD1 (ENSMPUG00000012007) #33 SIX2 (ENSMPUG00000012005) #34 ENSMPUG00000012001 SIX3 (ENSMPUG00000011994) #35 CAMKMT (ENSMPUG00000011984) #36 Ursidae ANCESTRAL SPECIES 9 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Giant Panda MODERN SPECIES 14 ERLEC1 (ENSAMEG00000004550) #7 CHAC2 (ENSAMEG00000004580) #9 ASB3 (ENSAMEG00000004591) #8 NRXN1 (ENSAMEG00000013969) #10 FSHR (ENSAMEG00000000237) #12 ENSAMEG00000006534 #13 GTF2A1L (ENSAMEG00000006495) STON1 (ENSAMEG00000023761) #14 PPP1R21 (ENSAMEG00000006444) #15 FOXN2 (ENSAMEG00000006413) #16 FBXO11 (ENSAMEG00000006341) #17 MSH6 (ENSAMEG00000006324) #18 KCNK12 (ENSAMEG00000006310) #19 MSH2 (ENSAMEG00000006254) #20 ENSAMEG00000006223 #21 CALM2 (ENSAMEG00000026131) #22 STPG4 (ENSAMEG00000006199) #23 TTC7A (ENSAMEG00000006106) #24 ENSAMEG00000006097 #25 SOCS5 (ENSAMEG00000028144) #26 ENSAMEG00000027374 #27 PIGF (ENSAMEG00000006094) #28 ENSAMEG00000006082 #29 ATP6V1E2 (ENSAMEG00000019292) #30 TMEM247 (ENSAMEG00000006079) #31 EPAS1 (ENSAMEG00000006020) PRKCE (ENSAMEG00000006013) #32 SRBD1 (ENSAMEG00000005993) #33 SIX2 (ENSAMEG00000026315) #34 SIX3 (ENSAMEG00000028787) #35 CAMKMT (ENSAMEG00000005966) #36 Ursus ANCESTRAL SPECIES 20 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 Polar bear MODERN SPECIES 223 CHAC2 (ENSUMAG00000013731) #9 ASB3 (ENSUMAG00000013726) #8 NRXN1 (ENSUMAG00000013682) #10 ENSUMAG00000013659 #10 FSHR (ENSUMAG00000013633) #12 LHCGR (ENSUMAG00000013617) #13 GTF2A1L (ENSUMAG00000013612) STON1 (ENSUMAG00000013608) #14 PPP1R21 (ENSUMAG00000013439) #15 ENSUMAG00000013431 FOXN2 (ENSUMAG00000013426) #16 FBXO11 (ENSUMAG00000013221) #17 MSH6 (ENSUMAG00000013204) #18 MSH2 (ENSUMAG00000013174) #20 EPCAM (ENSUMAG00000013164) #21 CALM2 (ENSUMAG00000013143) #22 STPG4 (ENSUMAG00000013136) #23 TTC7A (ENSUMAG00000013027) #24 ENSUMAG00000013016 #25 CRIPT (ENSUMAG00000012991) #27 PIGF (ENSUMAG00000012982) #28 RHOQ (ENSUMAG00000012973) #29 ATP6V1E2 (ENSUMAG00000012963) #30 TMEM247 (ENSUMAG00000012959) #31 EPAS1 (ENSUMAG00000012951) ENSUMAG00000012928 #32 ENSUMAG00000012925 #32 ENSUMAG00000012918 #32 SRBD1 (ENSUMAG00000012902) #33 ENSUMAG00000012890 CAMKMT (ENSUMAG00000012879) #36 American black bear MODERN SPECIES 750 CALM2 (ENSUAMG00000027055) #22 STPG4 (ENSUAMG00000027057) #23 TTC7A (ENSUAMG00000027058) #24 ENSUAMG00000027059 #25 SOCS5 (ENSUAMG00000027062) #26 CRIPT (ENSUAMG00000027063) #27 PIGF (ENSUAMG00000027064) #28 Canidae ANCESTRAL SPECIES 10 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00390000013951.db.b ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00390000013951.db.b ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Dingo DUPLICATION Dingo MODERN SPECIES 307 ENSCAFG00020026463 ENSCAFG00020026461 FSHR (ENSCAFG00020026460) #12 LHCGR (ENSCAFG00020026458) #13 GTF2A1L (ENSCAFG00020026457) STON1 (ENSCAFG00020026456) #14 PPP1R21 (ENSCAFG00020026455) #15 FOXN2 (ENSCAFG00020026454) #16 ENSCAFG00020026452 FBXO11 (ENSCAFG00020026423) #17 MSH6 (ENSCAFG00020026419) #18 ENSCAFG00020026417 KCNK12 (ENSCAFG00020026415) #19 MSH2 (ENSCAFG00020026414) #20 EPCAM (ENSCAFG00020026413) #21 CALM2 (ENSCAFG00020026411) #22 STPG4 (ENSCAFG00020026410) #23 TTC7A (ENSCAFG00020026409) #24 MCFD2 (ENSCAFG00020026408) #25 SOCS5 (ENSCAFG00020026406) #26 CRIPT (ENSCAFG00020026401) #27 PIGF (ENSCAFG00020026399) #28 RHOQ (ENSCAFG00020026397) #29 ATP6V1E2 (ENSCAFG00020026395) #30 TMEM247 (ENSCAFG00020026393) #31 EPAS1 (ENSCAFG00020026386) ENSCAFG00020026376 #32 ENSCAFG00020026372 #32 SRBD1 (ENSCAFG00020026284) #33 SIX2 (ENSCAFG00020026263) #34 SIX3 (ENSCAFG00020026262) #35 Dingo MODERN SPECIES 161 RAD51B (ENSCAFG00020005982) ZFYVE26 (ENSCAFG00020005996) RDH12 (ENSCAFG00020006302) RDH11 (ENSCAFG00020006316) VTI1B (ENSCAFG00020006324) ARG2 (ENSCAFG00020006329) PIGH (ENSCAFG00020006335) PLEKHH1 (ENSCAFG00020006366) TMEM229B (ENSCAFG00020006534) PLEK2 (ENSCAFG00020006535) EIF2S1 (ENSCAFG00020006539) ATP6V1D (ENSCAFG00020006543) PALS1 (ENSCAFG00020006548) GARIN2 (ENSCAFG00020006693) GPHN (ENSCAFG00020006734) ENSCAFG00020006739 #22 ENSCAFG00020006742 ENSCAFG00020006743 ENSCAFG00020006753 CCDC196 (ENSCAFG00020006761) FUT8 (ENSCAFG00020006786) ENSCAFG00020006817 ENSCAFG00020006820 ENSCAFG00020006824 MAX (ENSCAFG00020006853) FNTB (ENSCAFG00020006858) RAB15 (ENSCAFG00020006867) GPX2 (ENSCAFG00020006873) ENSCAFG00020006879 SPTB (ENSCAFG00020006916) PLEKHG3 (ENSCAFG00020007103) Dog DUPLICATION Dog MODERN SPECIES 1 ENSCAFG00845007601 NRXN1 (ENSCAFG00845006920) #10 FSHR (ENSCAFG00845006515) #12 LHCGR (ENSCAFG00845006174) #13 GTF2A1L (ENSCAFG00845006018) STON1 (ENSCAFG00845005959) #14 STON1 (ENSCAFG00845005733) #15 FOXN2 (ENSCAFG00845005620) #16 LSM3 (ENSCAFG00845005601) FBXO11 (ENSCAFG00845005550) #17 MSH6 (ENSCAFG00845005493) #18 ENSCAFG00845005461 KCNK12 (ENSCAFG00845005433) #19 MSH2 (ENSCAFG00845005364) #20 EPCAM (ENSCAFG00845005300) #21 CALM2 (ENSCAFG00845005256) #22 CALM2 (ENSCAFG00845005229) #23 TTC7A (ENSCAFG00845028519) #24 ENSCAFG00845028228 #25 SOCS5 (ENSCAFG00845028095) #26 CRIPT (ENSCAFG00845028021) #27 PIGF (ENSCAFG00845027939) #28 RHOQ (ENSCAFG00845027887) #29 ATP6V1E2 (ENSCAFG00845027863) #30 TMEM247 (ENSCAFG00845027828) #31 EPAS1 (ENSCAFG00845027702) PRKCE (ENSCAFG00845027571) #32 SRBD1 (ENSCAFG00845027248) #33 SIX2 (ENSCAFG00845027100) #34 SIX3 (ENSCAFG00845027028) #35 CAMKMT (ENSCAFG00845026914) #36 Dog MODERN SPECIES 36 ENSCAFG00845003684 RAD51B (ENSCAFG00845003641) ZFYVE26 (ENSCAFG00845003602) RDH12 (ENSCAFG00845003571) RDH11 (ENSCAFG00845003551) VTI1B (ENSCAFG00845003511) ARG2 (ENSCAFG00845003478) PIGH (ENSCAFG00845003443) PLEKHH1 (ENSCAFG00845003414) TMEM229B (ENSCAFG00845003381) PLEK2 (ENSCAFG00845003328) EIF2S1 (ENSCAFG00845003308) ATP6V1D (ENSCAFG00845003279) PALS1 (ENSCAFG00845003252) GARIN2 (ENSCAFG00845003237) ENSCAFG00845003227 #22 ENSCAFG00845003219 ENSCAFG00845003201 GPHN (ENSCAFG00845003022) CCDC196 (ENSCAFG00845002927) ENSCAFG00845002877 ENSCAFG00845002859 ENSCAFG00845002840 ENSCAFG00845002829 FUT8 (ENSCAFG00845002810) MAX (ENSCAFG00845002666) FNTB (ENSCAFG00845002568) ENSCAFG00845002535 GPX2 (ENSCAFG00845002511) ENSCAFG00845002489 SPTB (ENSCAFG00845002451) Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Equus ANCESTRAL SPECIES 7 ENSGT00940000159080 #8 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ENSGT01050000244924.a.a.b.eb ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.j #27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00950000185367 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Donkey MODERN SPECIES 26 ENSEASG00005002596 ENSEASG00005002590 #10 ENSEASG00005002618 ENSEASG00005026193 FSHR (ENSEASG00005002622) #12 LHCGR (ENSEASG00005002627) #13 GTF2A1L (ENSEASG00005002630) STON1 (ENSEASG00005002632) #14 PPP1R21 (ENSEASG00005002636) #15 FOXN2 (ENSEASG00005002642) #16 FBXO11 (ENSEASG00005002648) #17 MSH6 (ENSEASG00005002660) #18 KCNK12 (ENSEASG00005031477) #19 MSH2 (ENSEASG00005002682) #20 EPCAM (ENSEASG00005003002) #21 CALM2 (ENSEASG00005032373) #22 STPG4 (ENSEASG00005003021) #23 TTC7A (ENSEASG00005003026) #24 ENSEASG00005003033 #25 SOCS5 (ENSEASG00005033280) #26 CRIPT (ENSEASG00005035430) #27 PIGF (ENSEASG00005003043) #28 ENSEASG00005033593 #29 ATP6V1E2 (ENSEASG00005003048) #30 TMEM247 (ENSEASG00005003049) #31 EPAS1 (ENSEASG00005003062) ENSEASG00005003078 PRKCE (ENSEASG00005003080) #32 ENSEASG00005027046 #32 SRBD1 (ENSEASG00005003132) #33 SIX2 (ENSEASG00005003317) #34 Horse MODERN SPECIES 23 ENSECAG00000052008 HNRNPU (ENSECAG00000007955) COX20 (ENSECAG00000008125) DESI2 (ENSECAG00000008142) CATSPERE (ENSECAG00000008228) ENSECAG00000056420 ENSECAG00000041634 ADSS2 (ENSECAG00000010744) C30H1orf100 (ENSECAG00000016894) ZBTB18 (ENSECAG00000033381) AKT3 (ENSECAG00000019722) SDCCAG8 (ENSECAG00000008477) CEP170 (ENSECAG00000012163) ENSECAG00000049767 #22 ENSECAG00000052988 PLD5 (ENSECAG00000015845) ENSECAG00000037253 BECN2 (ENSECAG00000017996) ENSECAG00000047917 EXO1 (ENSECAG00000018322) WDR64 (ENSECAG00000007512) OPN3 (ENSECAG00000014947) CHML (ENSECAG00000049917) KMO (ENSECAG00000015341) FH (ENSECAG00000020726) ENSECAG00000046999 RGS7 (ENSECAG00000009422) GREM2 (ENSECAG00000003167) ENSECAG00000043023 Chiroptera ANCESTRAL SPECIES 10 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.i.a.b ##27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C.i.a.b ##27 ENSGT00390000016617 #28 ENSGT00940000155970.q #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Greater horseshoe bat MODERN SPECIES 4 CHAC2 (ENSRFEG00010014005) #9 ENSRFEG00010014062 ENSRFEG00010014116 NRXN1 (ENSRFEG00010014266) #10 FSHR (ENSRFEG00010016578) #12 LHCGR (ENSRFEG00010016889) #13 GTF2A1L (ENSRFEG00010016969) STON1 (ENSRFEG00010017218) #14 PPP1R21 (ENSRFEG00010017268) #15 FOXN2 (ENSRFEG00010017393) #16 FBXO11 (ENSRFEG00010005278) #17 MSH6 (ENSRFEG00010005308) #18 KCNK12 (ENSRFEG00010005334) #19 MSH2 (ENSRFEG00010005356) #20 EPCAM (ENSRFEG00010005391) #21 CALM2 (ENSRFEG00010005417) #22 ENSRFEG00010005450 STPG4 (ENSRFEG00010005468) #23 TTC7A (ENSRFEG00010005555) #24 ENSRFEG00010005683 #25 SOCS5 (ENSRFEG00010005706) #26 ENSRFEG00010005727 ##27 PIGF (ENSRFEG00010005768) #28 RHOQ (ENSRFEG00010005807) #29 ATP6V1E2 (ENSRFEG00010005825) #30 EPAS1 (ENSRFEG00010005865) PRKCE (ENSRFEG00010005919) #32 SRBD1 (ENSRFEG00010005992) #33 SIX2 (ENSRFEG00010006045) #34 SIX3 (ENSRFEG00010006068) #35 CAMKMT (ENSRFEG00010006109) #36 Microbat MODERN SPECIES 943 ASB3 (ENSMLUG00000011108) #8 ENSMLUG00000029070 NRXN1 (ENSMLUG00000007944) #10 ENSMLUG00000007921 ENSMLUG00000026006 FSHR (ENSMLUG00000007827) #12 LHCGR (ENSMLUG00000011758) #13 STON1 (ENSMLUG00000011744) #14 PPP1R21 (ENSMLUG00000017568) #15 FOXN2 (ENSMLUG00000017567) #16 FBXO11 (ENSMLUG00000008808) #17 MSH6 (ENSMLUG00000008787) #18 MSH2 (ENSMLUG00000011007) #20 KCNK12 (ENSMLUG00000011046) #19 EPCAM (ENSMLUG00000003363) #21 CALM2 (ENSMLUG00000029016) #22 TTC7A (ENSMLUG00000004211) #24 MCFD2 (ENSMLUG00000004210) #25 SOCS5 (ENSMLUG00000004206) #26 CRIPT (ENSMLUG00000004193) ##27 PIGF (ENSMLUG00000008686) #28 RHOQ (ENSMLUG00000001567) #29 ATP6V1E2 (ENSMLUG00000013958) #30 TMEM247 (ENSMLUG00000005777) #31 EPAS1 (ENSMLUG00000007093) PRKCE (ENSMLUG00000007061) #32 SRBD1 (ENSMLUG00000007039) #33 SIX2 (ENSMLUG00000007246) #34 CAMKMT (ENSMLUG00000016130) #36 PREPL (ENSMLUG00000016118) #37 SLC3A1 (ENSMLUG00000016111) Megabat MODERN SPECIES 2258 MSH2 (ENSPVAG00000005190) #20 EPCAM (ENSPVAG00000005187) #21 CALM2 (ENSPVAG00000005183) #22 STPG4 (ENSPVAG00000005179) #23 TTC7A (ENSPVAG00000005174) #24 MCFD2 (ENSPVAG00000005172) #25 SOCS5 (ENSPVAG00000005170) #26 Eulipotyphla ANCESTRAL SPECIES 2266 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 Common shrew MODERN SPECIES 12829 CALM2 (ENSSARG00000008731) #22 Hedgehog MODERN SPECIES 5491 CALM2 (ENSEEUG00000000040) #22 ENSEEUG00000000037 #23 Atlantogenata ANCESTRAL SPECIES 14 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Xenarthra ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b #22 Sloth MODERN SPECIES 8972 CALM2 (ENSCHOG00000008245) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3550 ENSDNOG00000031925 SHISAL2A (ENSDNOG00000045230) GPX7 (ENSDNOG00000036505) TUT4 (ENSDNOG00000013920) ENSDNOG00000042326 ORC1 (ENSDNOG00000013883) CC2D1B (ENSDNOG00000017180) ZFYVE9 (ENSDNOG00000008484) ENSDNOG00000003181 TXNDC12 (ENSDNOG00000040593) RAB3B (ENSDNOG00000003158) NRDC (ENSDNOG00000013916) OSBPL9 (ENSDNOG00000013879) ENSDNOG00000046109 #22 EPS15 (ENSDNOG00000034252) TTC39A (ENSDNOG00000042530) ENSDNOG00000013675 C1orf185 (ENSDNOG00000035981) CDKN2C (ENSDNOG00000040641) FAF1 (ENSDNOG00000032394) DMRTA2 (ENSDNOG00000041150) ELAVL4 (ENSDNOG00000033502) ENSDNOG00000041530 ETV1 (ENSDNOG00000010823) ENSDNOG00000042500 Armadillo MODERN SPECIES 355 ENSDNOG00000004645 #22 ENSDNOG00000039220 STPG4 (ENSDNOG00000039454) #23 TTC7A (ENSDNOG00000045960) #24 MCFD2 (ENSDNOG00000032663) #25 SOCS5 (ENSDNOG00000020011) #26 CRIPT (ENSDNOG00000035515) #27 PIGF (ENSDNOG00000041519) #28 RHOQ (ENSDNOG00000047538) #29 ATP6V1E2 (ENSDNOG00000007277) #30 TMEM247 (ENSDNOG00000042102) #31 EPAS1 (ENSDNOG00000005938) PRKCE (ENSDNOG00000048651) #32 ENSDNOG00000038824 #32 SRBD1 (ENSDNOG00000018686) #33 SIX2 (ENSDNOG00000018725) #34 Afrotheria ANCESTRAL SPECIES 39 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 Tenrec MODERN SPECIES 5335 CALM2 (ENSETEG00000018667) #22 ENSETEG00000018663 Afrotheria_a ANCESTRAL SPECIES 36 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002730.c.b #30 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 Elephant DUPLICATION Elephant MODERN SPECIES 573 ENSLAFG00000031012 ENSLAFG00000031420 ENSLAFG00000012722 ENSLAFG00000007469 ENSLAFG00000022467 ENSLAFG00000026672 ENSLAFG00000028567 ENSLAFG00000028802 TMEM47 (ENSLAFG00000014908) ENSLAFG00000011312 ENSLAFG00000027702 ENSLAFG00000026650 ENSLAFG00000031705 ENSLAFG00000014053 MAGEB16 (ENSLAFG00000000136) ENSLAFG00000030786 #22 ENSLAFG00000003949 ENSLAFG00000030864 ENSLAFG00000027564 ENSLAFG00000028842 ENSLAFG00000022112 ENSLAFG00000031140 ENSLAFG00000028405 Elephant MODERN SPECIES 438 CHAC2 (ENSLAFG00000010523) #9 ASB3 (ENSLAFG00000010517) #8 ENSLAFG00000029467 #10 ENSLAFG00000000247 #10 FSHR (ENSLAFG00000017106) #12 LHCGR (ENSLAFG00000011056) #13 GTF2A1L (ENSLAFG00000031070) STON1 (ENSLAFG00000013732) #14 PPP1R21 (ENSLAFG00000013728) #15 FOXN2 (ENSLAFG00000012466) #16 FBXO11 (ENSLAFG00000001595) #17 MSH6 (ENSLAFG00000001592) #18 KCNK12 (ENSLAFG00000029102) #19 MSH2 (ENSLAFG00000017344) #20 EPCAM (ENSLAFG00000006360) #21 ENSLAFG00000009865 #22 ENSLAFG00000026903 #23 TTC7A (ENSLAFG00000008028) #24 MCFD2 (ENSLAFG00000007876) #25 SOCS5 (ENSLAFG00000015752) #26 CRIPT (ENSLAFG00000004331) #27 PIGF (ENSLAFG00000004329) #28 RHOQ (ENSLAFG00000004327) #29 ATP6V1E2 (ENSLAFG00000013710) #30 TMEM247 (ENSLAFG00000028658) #31 EPAS1 (ENSLAFG00000012361) PRKCE (ENSLAFG00000005726) #32 Marsupialia ANCESTRAL SPECIES 17 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711.e #32 ENSGT00940000154711.f #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Opossum DUPLICATION Opossum MODERN SPECIES ENSMODG00000047857 ENSMODG00000050387 ENSMODG00000050026 FSHR (ENSMODG00000001267) #12 LHCGR (ENSMODG00000001240) #13 ENSMODG00000043681 STON1 (ENSMODG00000001190) #14 PPP1R21 (ENSMODG00000001186) #15 FOXN2 (ENSMODG00000001169) #16 ENSMODG00000051547 FBXO11 (ENSMODG00000001160) #17 MSH6 (ENSMODG00000001129) #18 KCNK12 (ENSMODG00000001106) #19 ENSMODG00000001098 #20 EPCAM (ENSMODG00000001077) #21 CALM2 (ENSMODG00000001059) #22 ENSMODG00000001050 #23 TTC7A (ENSMODG00000001041) #24 MCFD2 (ENSMODG00000001011) #25 SOCS5 (ENSMODG00000023104) #26 PIGF (ENSMODG00000000968) #28 CRIPT (ENSMODG00000000973) #27 RHOQ (ENSMODG00000000965) #29 TMEM247 (ENSMODG00000050952) #31 ENSMODG00000000953 ENSMODG00000045158 ENSMODG00000039002 #32 ENSMODG00000036747 #32 ENSMODG00000044493 ENSMODG00000027407 ENSMODG00000000928 #32 Opossum DUPLICATION Opossum MODERN SPECIES 5 TUSC1 (ENSMODG00000004001) ENSMODG00000038345 PLAA (ENSMODG00000004155) IFT74 (ENSMODG00000004236) LRRC19 (ENSMODG00000004246) TEK (ENSMODG00000004269) ENSMODG00000004305 MOB3B (ENSMODG00000004294) ENSMODG00000004309 C9orf72 (ENSMODG00000004328) LINGO2 (ENSMODG00000025148) ENSMODG00000046967 ENSMODG00000047494 ENSMODG00000044645 ENSMODG00000004341 ENSMODG00000041910 #22 ENSMODG00000004424 ENSMODG00000005705 ENSMODG00000039203 ENSMODG00000040853 ACO1 (ENSMODG00000004463) NDUFB6 (ENSMODG00000004585) TMEM215 (ENSMODG00000025140) ENSMODG00000004608 PTGR1 (ENSMODG00000004680) ENSMODG00000046345 ENSMODG00000004771 ENSMODG00000004719 ENSMODG00000038043 ENSMODG00000037931 ENSMODG00000010408 Opossum MODERN SPECIES 1 GEMIN4 (ENSMODG00000023170) ENSMODG00000023171 GLOD4 (ENSMODG00000010038) MRM3 (ENSMODG00000010029) ENSMODG00000048571 TIMM22 (ENSMODG00000010014) ABR (ENSMODG00000010001) ENSMODG00000010574 ENSMODG00000038383 TRARG1 (ENSMODG00000009959) ENSMODG00000049395 GOSR1 (ENSMODG00000041802) CPD (ENSMODG00000009938) ENSMODG00000038151 ENSMODG00000048479 ENSMODG00000023173 #22 TMIGD1 (ENSMODG00000009919) BLMH (ENSMODG00000009909) SLC6A4 (ENSMODG00000009884) NSRP1 (ENSMODG00000009868) ENSMODG00000009859 SSH2 (ENSMODG00000009679) CORO6 (ENSMODG00000009661) ANKRD13B (ENSMODG00000009623) GTF2I (ENSMODG00000007022) NCF1 (ENSMODG00000006952) RCC1L (ENSMODG00000006921) CASTOR2 (ENSMODG00000006907) ENSMODG00000006892 PHKG1 (ENSMODG00000043196) AUTS2 (ENSMODG00000006856) Marsupialia_b ANCESTRAL SPECIES 19 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711.e #32 ENSGT00940000154711.f #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 3 ENSSHAG00000029772 NR5A2 (ENSSHAG00000011399) PTPRC (ENSSHAG00000015523) ATP6V1G3 (ENSSHAG00000021039) NEK7 (ENSSHAG00000026101) LHX9 (ENSSHAG00000012386) ENSSHAG00000026345 DENND1B (ENSSHAG00000009711) CRB1 (ENSSHAG00000008433) ZBTB41 (ENSSHAG00000005014) ASPM (ENSSHAG00000003389) F13B (ENSSHAG00000001242) ENSSHAG00000003041 KCNT2 (ENSSHAG00000007306) ENSSHAG00000025160 ENSSHAG00000000199 #22 B3GALT2 (ENSSHAG00000026757) CDC73 (ENSSHAG00000013464) GLRX2 (ENSSHAG00000031431) RO60 (ENSSHAG00000027682) UCHL5 (ENSSHAG00000030758) RGS2 (ENSSHAG00000021123) ENSSHAG00000023026 RGS1 (ENSSHAG00000025712) RGS21 (ENSSHAG00000022729) ENSSHAG00000029586 RGS18 (ENSSHAG00000006527) ENSSHAG00000027804 BRINP3 (ENSSHAG00000007307) ENSSHAG00000031269 ENSSHAG00000030508 Tasmanian devil MODERN SPECIES 1 ASB3 (ENSSHAG00000014938) #8 ENSSHAG00000002825 NRXN1 (ENSSHAG00000014272) #10 ENSSHAG00000032322 FSHR (ENSSHAG00000012463) #12 LHCGR (ENSSHAG00000014648) #13 GTF2A1L (ENSSHAG00000014978) STON1 (ENSSHAG00000001134) #14 PPP1R21 (ENSSHAG00000000153) #15 FOXN2 (ENSSHAG00000001461) #16 FBXO11 (ENSSHAG00000007704) #17 MSH6 (ENSSHAG00000008029) #18 KCNK12 (ENSSHAG00000028144) #19 MSH2 (ENSSHAG00000000468) #20 EPCAM (ENSSHAG00000027223) #21 ENSSHAG00000031926 #22 STPG4 (ENSSHAG00000001017) #23 TTC7A (ENSSHAG00000004355) #24 ENSSHAG00000027517 #25 CRIPT (ENSSHAG00000027319) #27 SOCS5 (ENSSHAG00000029401) #26 PIGF (ENSSHAG00000010450) #28 RHOQ (ENSSHAG00000010682) #29 ENSSHAG00000032230 #31 EPAS1 (ENSSHAG00000012056) ENSSHAG00000023372 #32 ENSSHAG00000015686 #32 SRBD1 (ENSSHAG00000015871) #33 SIX2 (ENSSHAG00000021527) #34 SIX3 (ENSSHAG00000029380) #35 CAMKMT (ENSSHAG00000024856) #36 Diprotodontia ANCESTRAL SPECIES 13 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711.e #32 ENSGT00940000154711.f #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES 14 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b.ac #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879 #31 ENSGT00940000155930 ENSGT00940000154711.e #32 ENSGT00940000154711.f #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Common wonbat MODERN SPECIES 1017 ENSVURG00010014760 #10 ENSVURG00010014807 ENSVURG00010014902 ENSVURG00010014912 FSHR (ENSVURG00010014932) #12 LHCGR (ENSVURG00010014953) #13 GTF2A1L (ENSVURG00010014973) STON1 (ENSVURG00010015010) #14 PPP1R21 (ENSVURG00010015035) #15 FOXN2 (ENSVURG00010015092) #16 FBXO11 (ENSVURG00010015131) #17 MSH6 (ENSVURG00010015249) #18 KCNK12 (ENSVURG00010015272) #19 MSH2 (ENSVURG00010015285) #20 EPCAM (ENSVURG00010015305) #21 ENSVURG00010015322 #22 STPG4 (ENSVURG00010015336) #23 TTC7A (ENSVURG00010015349) #24 MCFD2 (ENSVURG00010015361) #25 SOCS5 (ENSVURG00010015381) #26 CRIPT (ENSVURG00010015392) #27 PIGF (ENSVURG00010015396) #28 RHOQ (ENSVURG00010015409) #29 EPAS1 (ENSVURG00010015420) ENSVURG00010015478 #32 ENSVURG00010016287 #32 SRBD1 (ENSVURG00010016306) #33 SIX2 (ENSVURG00010016333) #34 ENSVURG00010016351 SIX3 (ENSVURG00010016360) #35 CAMKMT (ENSVURG00010016381) #36 koala MODERN SPECIES 89 LHCGR (ENSPCIG00000004513) #13 GTF2A1L (ENSPCIG00000004964) STON1 (ENSPCIG00000004952) #14 PPP1R21 (ENSPCIG00000004876) #15 FOXN2 (ENSPCIG00000035167) #16 FBXO11 (ENSPCIG00000025983) #17 MSH6 (ENSPCIG00000025984) #18 KCNK12 (ENSPCIG00000025986) #19 MSH2 (ENSPCIG00000025987) #20 EPCAM (ENSPCIG00000025989) #21 ENSPCIG00000025995 #22 STPG4 (ENSPCIG00000026006) #23 TTC7A (ENSPCIG00000026001) #24 MCFD2 (ENSPCIG00000033308) #25 ENSPCIG00000002626 SOCS5 (ENSPCIG00000026010) #26 CRIPT (ENSPCIG00000017132) #27 PIGF (ENSPCIG00000017135) #28 RHOQ (ENSPCIG00000017137) #29 ENSPCIG00000033994 #31 EPAS1 (ENSPCIG00000014365) ENSPCIG00000037190 #32 ENSPCIG00000025059 #32 ENSPCIG00000034995 SRBD1 (ENSPCIG00000025060) #33 SIX2 (ENSPCIG00000006921) #34 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00940000159080 #8 ENSGT00390000003855.a #9 ENSGT00530000063603.B #7 ENSGT00390000007723 ENSGT00390000011433 ENSGT00390000011103.A ENSGT00950000182980.a.b.b.b.bc #22 ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b ENSGT00390000014001 ENSGT00940000157837 ENSGT00940000157361 ENSGT00940000158042 koala MODERN SPECIES 63 ENSPCIG00000022612 ENSPCIG00000012044 ENSPCIG00000035154 ENSPCIG00000008827 #10 ENSPCIG00000016001 #10 ENSPCIG00000024152 ASB3 (ENSPCIG00000007187) #8 CHAC2 (ENSPCIG00000007404) #9 ERLEC1 (ENSPCIG00000007406) #7 GPR75 (ENSPCIG00000008642) PSME4 (ENSPCIG00000008643) ENSPCIG00000026923 ENSPCIG00000026924 #22 ENSPCIG00000026925 SPTBN1 (ENSPCIG00000018457) ENSPCIG00000010434 ENSPCIG00000010431 EML6 (ENSPCIG00000010427) RTN4 (ENSPCIG00000010419) CLHC1 (ENSPCIG00000010411) ENSPCIG00000010410 ENSPCIG00000010408 MTIF2 (ENSPCIG00000010405) ENSPCIG00000010404 ENSPCIG00000036178 CCDC88A (ENSPCIG00000010379) CFAP36 (ENSPCIG00000010245) ENSPCIG00000010238 Common wonbat MODERN SPECIES 1017 GTF2A1L (ENSVURG00010014973) LHCGR (ENSVURG00010014953) #13 FSHR (ENSVURG00010014932) #12 ENSVURG00010014912 ENSVURG00010014902 ENSVURG00010014807 ENSVURG00010014760 #10 ENSVURG00010014727 #10 ENSVURG00010014704 CHAC2 (ENSVURG00010014690) #9 ASB3 (ENSVURG00010014669) #8 ERLEC1 (ENSVURG00010014651) #7 GPR75 (ENSVURG00010014637) PSME4 (ENSVURG00010014522) ENSVURG00010014502 ENSVURG00010014481 #22 ENSVURG00010014468 SPTBN1 (ENSVURG00010014369) EML6 (ENSVURG00010014289) ENSVURG00010014197 CLHC1 (ENSVURG00010014155) ENSVURG00010014144 MTIF2 (ENSVURG00010014139) ENSVURG00010014135 CCDC88A (ENSVURG00010014027) CFAP36 (ENSVURG00010013983) ENSVURG00010013950 PNPT1 (ENSVURG00010013927) ENSVURG00010013924 EFEMP1 (ENSVURG00010013908) CCDC85A (ENSVURG00010013878) Platypus MODERN SPECIES 20 PSME4 (ENSOANG00000004646) ERLEC1 (ENSOANG00000004645) #7 ENSOANG00000005333 #8 NRXN1 (ENSOANG00000040029) #10 ENSOANG00000014530 FSHR (ENSOANG00000038550) #12 LHCGR (ENSOANG00000002542) #13 ENSOANG00000002541 ENSOANG00000045943 #14 PPP1R21 (ENSOANG00000012259) #15 FOXN2 (ENSOANG00000039826) #16 FBXO11 (ENSOANG00000009864) #17 MSH6 (ENSOANG00000041939) #18 MSH2 (ENSOANG00000013431) #20 ENSOANG00000009081 #21 CALM2 (ENSOANG00000001711) #22 ENSOANG00000040717 #23 TTC7A (ENSOANG00000002071) #24 ENSOANG00000036617 #25 ENSOANG00000002821 PIGF (ENSOANG00000038758) #28 RHOQ (ENSOANG00000020399) #29 ENSOANG00000015360 PRKCE (ENSOANG00000042804) #32 SRBD1 (ENSOANG00000042146) #33 SIX2 (ENSOANG00000005315) #34 SIX3 (ENSOANG00000048536) #35 CAMKMT (ENSOANG00000042799) #36 ENSOANG00000043841 #37 SLC3A1 (ENSOANG00000029188) PPM1B (ENSOANG00000006156) Sauria ANCESTRAL SPECIES 1 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Archelosauria ANCESTRAL SPECIES 1 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00990000205865 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Testudinoidea ANCESTRAL SPECIES ENSGT00940000158952 #12 ENSGT00940000163749 ENSGT00940000154292.a.b #10 ENSGT00940000159080 #8 ENSGT00390000003855.a #9 ENSGT00530000063603.B #7 ENSGT00390000007723 ENSGT00390000011433 ENSGT00390000011103.A ENSGT01030000234712.a ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Emydidae ANCESTRAL SPECIES 9 ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00530000063603.B #7 ENSGT00990000213407 ENSGT00390000007723 ENSGT00390000011433 ENSGT00390000011103.A ENSGT01030000234712.a.i ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Three-toed box turtle MODERN SPECIES 55 ENSTMTG00000007397 CHAC2 (ENSTMTG00000007381) #9 ASB3 (ENSTMTG00000007361) #8 ERLEC1 (ENSTMTG00000007326) #7 ENSTMTG00000007312 GPR75 (ENSTMTG00000007302) PSME4 (ENSTMTG00000006196) ACYP2 (ENSTMTG00000006075) C2orf73 (ENSTMTG00000006044) SPTBN1 (ENSTMTG00000005791) KCNK12 (ENSTMTG00000005769) #19 ENSTMTG00000005759 #20 EPCAM (ENSTMTG00000006606) #21 CALM2 (ENSTMTG00000006594) #22 STPG4 (ENSTMTG00000006570) #23 TTC7A (ENSTMTG00000005418) #24 MCFD2 (ENSTMTG00000005324) #25 ENSTMTG00000005282 CRIPT (ENSTMTG00000005259) #27 PIGF (ENSTMTG00000005238) #28 RHOQ (ENSTMTG00000005207) #29 EPAS1 (ENSTMTG00000005168) PRKCE (ENSTMTG00000005128) #32 SRBD1 (ENSTMTG00000005083) #33 SIX2 (ENSTMTG00000005066) #34 SIX3 (ENSTMTG00000005050) #35 CAMKMT (ENSTMTG00000005018) #36 ENSTMTG00000004975 #36 PREPL (ENSTMTG00000004945) #37 painted turtle MODERN SPECIES 1006 CALM2 (ENSCPBG00000016723) #22 ENSCPBG00000016721 STPG4 (ENSCPBG00000016719) #23 TTC7A (ENSCPBG00000016702) #24 MCFD2 (ENSCPBG00000016693) #25 ENSCPBG00000016689 ENSCPBG00000016688 MAP4K1 (ENSCPBG00000016683) ENSCPBG00000015057 Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000163055 ENSGT00940000158952 #12 ENSGT00940000163749 ENSGT00940000154292.a.b #10 ENSGT00940000159080 #8 ENSGT00390000003855.a #9 ENSGT00530000063603.B #7 ENSGT00390000007723 ENSGT00390000011433.e ENSGT00390000011103.A ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005000844 ENSGEVG00005000827 CHAC2 (ENSGEVG00005000817) #9 ASB3 (ENSGEVG00005000787) #8 ERLEC1 (ENSGEVG00005000764) #7 GPR75 (ENSGEVG00005000753) PSME4 (ENSGEVG00005000654) ACYP2 (ENSGEVG00005000596) C2orf73 (ENSGEVG00005000581) ENSGEVG00005000568 SPTBN1 (ENSGEVG00005000431) ENSGEVG00005000403 #19 ENSGEVG00005000389 #19 MSH2 (ENSGEVG00005000351) #20 EPCAM (ENSGEVG00005000300) #21 CALM2 (ENSGEVG00005000282) #22 STPG4 (ENSGEVG00005000255) #23 TTC7A (ENSGEVG00005007402) #24 MCFD2 (ENSGEVG00005007368) #25 ENSGEVG00005007307 CRIPT (ENSGEVG00005007275) #27 PIGF (ENSGEVG00005007257) #28 RHOQ (ENSGEVG00005007235) #29 ENSGEVG00005007212 #31 EPAS1 (ENSGEVG00005007174) PRKCE (ENSGEVG00005007055) #32 SRBD1 (ENSGEVG00005007012) #33 SIX2 (ENSGEVG00005006989) #34 SIX3 (ENSGEVG00005006973) #35 CAMKMT (ENSGEVG00005006955) #36 PREPL (ENSGEVG00005006901) #37 Abingdon island giant tortoise MODERN SPECIES 2670 CALM2 (ENSCABG00000007221) #22 STPG4 (ENSCABG00000007193) #23 TTC7A (ENSCABG00000007189) #24 MCFD2 (ENSCABG00000007187) #25 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 1230 ENSPSIG00000008149 SIX3 (ENSPSIG00000008212) #35 SIX2 (ENSPSIG00000008635) #34 SRBD1 (ENSPSIG00000008992) #33 PRKCE (ENSPSIG00000011478) #32 EPAS1 (ENSPSIG00000012658) ENSPSIG00000014021 RHOQ (ENSPSIG00000014062) #29 PIGF (ENSPSIG00000014321) #28 CRIPT (ENSPSIG00000014392) #27 ENSPSIG00000014433 SOCS5 (ENSPSIG00000001791) #26 MCFD2 (ENSPSIG00000014785) #25 TTC7A (ENSPSIG00000014800) #24 ENSPSIG00000001793 ENSPSIG00000015376 #22 ENSPSIG00000015559 ENSPSIG00000015563 #22 EPCAM (ENSPSIG00000015680) #21 MSH2 (ENSPSIG00000015939) #20 MOCS1 (ENSPSIG00000016814) LRFN2 (ENSPSIG00000017033) ENSPSIG00000001796 Chinese turtle MODERN SPECIES 1230 ENSPSIG00000001796 LRFN2 (ENSPSIG00000017033) MOCS1 (ENSPSIG00000016814) MSH2 (ENSPSIG00000015939) #20 EPCAM (ENSPSIG00000015680) #21 ENSPSIG00000015563 #22 ENSPSIG00000015559 ENSPSIG00000015376 #22 ENSPSIG00000001793 TTC7A (ENSPSIG00000014800) #24 MCFD2 (ENSPSIG00000014785) #25 SOCS5 (ENSPSIG00000001791) #26 ENSPSIG00000014433 CRIPT (ENSPSIG00000014392) #27 PIGF (ENSPSIG00000014321) #28 RHOQ (ENSPSIG00000014062) #29 ENSPSIG00000014021 EPAS1 (ENSPSIG00000012658) PRKCE (ENSPSIG00000011478) #32 SRBD1 (ENSPSIG00000008992) #33 SIX2 (ENSPSIG00000008635) #34 Archosauria ANCESTRAL SPECIES 3 ENSGT00940000158952 #12 ENSGT00940000157364.C #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245.c #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.b #31 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Australian saltwater crocodile MODERN SPECIES 60 ENSCPRG00005014415 #10 ENSCPRG00005014446 NRXN1 (ENSCPRG00005014464) #10 ENSCPRG00005014512 FSHR (ENSCPRG00005014530) #12 GTF2A1L (ENSCPRG00005014546) STON1 (ENSCPRG00005014552) #14 PPP1R21 (ENSCPRG00005014556) #15 FOXN2 (ENSCPRG00005014578) #16 FBXO11 (ENSCPRG00005014585) #17 MSH6 (ENSCPRG00005014589) #18 KCNK12 (ENSCPRG00005014617) #19 ENSCPRG00005014618 MSH2 (ENSCPRG00005014621) #20 EPCAM (ENSCPRG00005014626) #21 CALM2 (ENSCPRG00005014636) #22 STPG4 (ENSCPRG00005014639) #23 TTC7A (ENSCPRG00005014677) #24 MCFD2 (ENSCPRG00005015138) #25 SOCS5 (ENSCPRG00005015151) #26 ENSCPRG00005015165 CRIPT (ENSCPRG00005015176) #27 PIGF (ENSCPRG00005015177) #28 RHOQ (ENSCPRG00005015179) #29 ENSCPRG00005015192 #31 ENSCPRG00005015201 #31 EPAS1 (ENSCPRG00005015213) PRKCE (ENSCPRG00005015247) #32 SRBD1 (ENSCPRG00005015290) #33 ENSCPRG00005015332 SIX2 (ENSCPRG00005015339) #34 Aves ANCESTRAL SPECIES 12 ENSGT00940000159813 ENSGT00930000151269 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00960000189498 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Neognathae ANCESTRAL SPECIES 2 ENSGT00940000159813 ENSGT00930000151269 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00960000189498 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Galloanserae ANCESTRAL SPECIES 2 ENSGT00940000159813 ENSGT00930000151269 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00960000189498 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Anatidae ANCESTRAL SPECIES 11 ENSGT00940000159813 ENSGT00930000151269 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00960000189498 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 Pink-footed goose MODERN SPECIES 3 SUPT7L (ENSABRG00000000780) SLC4A1AP (ENSABRG00000000850) ENSABRG00000000886 ENSABRG00000000913 RBKS (ENSABRG00000000937) BABAM2 (ENSABRG00000000977) FOSL2 (ENSABRG00000001111) PLB1 (ENSABRG00000001145) PPP1CB (ENSABRG00000001212) CALM2 (ENSABRG00000001266) #22 TTC7A (ENSABRG00000001836) #24 MCFD2 (ENSABRG00000001847) #25 SOCS5 (ENSABRG00000001905) #26 ENSABRG00000001929 PIGF (ENSABRG00000001948) #28 RHOQ (ENSABRG00000001959) #29 ENSABRG00000001964 ENSABRG00000001969 #31 EPAS1 (ENSABRG00000001981) PRKCE (ENSABRG00000002068) #32 SRBD1 (ENSABRG00000002126) #33 SIX2 (ENSABRG00000002145) #34 SIX3 (ENSABRG00000002158) #35 CAMKMT (ENSABRG00000002198) #36 PREPL (ENSABRG00000002237) #37 Duck MODERN SPECIES 21 KCNK16 (ENSAPLG00000005529) ENSAPLG00000022531 ENSAPLG00000028047 DAAM2 (ENSAPLG00000012050) MOCS1 (ENSAPLG00000012806) LRFN2 (ENSAPLG00000012986) SUPT7L (ENSAPLG00000013086) SLC4A1AP (ENSAPLG00000013096) ENSAPLG00000013296 ENSAPLG00000013328 RBKS (ENSAPLG00000013334) BABAM2 (ENSAPLG00000004664) FOSL2 (ENSAPLG00000009204) ENSAPLG00000021973 PPP1CB (ENSAPLG00000008367) CALM2 (ENSAPLG00000030583) #22 TTC7A (ENSAPLG00000007643) #24 MCFD2 (ENSAPLG00000023817) #25 SOCS5 (ENSAPLG00000001971) #26 CRIPT (ENSAPLG00000029053) #27 PIGF (ENSAPLG00000007535) #28 RHOQ (ENSAPLG00000029905) #29 ENSAPLG00000001956 ENSAPLG00000001954 #31 EPAS1 (ENSAPLG00000007160) PRKCE (ENSAPLG00000006475) #32 SRBD1 (ENSAPLG00000006313) #33 SIX3 (ENSAPLG00000016526) #35 CAMKMT (ENSAPLG00000008229) #36 PREPL (ENSAPLG00000008267) #37 ENSAPLG00000019208 Phasianidae ANCESTRAL SPECIES 3 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00960000189498 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00960000189319 Japanese quail MODERN SPECIES 21 KCNK5 (ENSCJPG00005010203) KCNK17 (ENSCJPG00005010202) KIF6 (ENSCJPG00005010201) DAAM2 (ENSCJPG00005010200) MOCS1 (ENSCJPG00005010199) LRFN2 (ENSCJPG00005010195) SUPT7L (ENSCJPG00005010190) SLC4A1AP (ENSCJPG00005010189) ENSCJPG00005010188 ENSCJPG00005010187 RBKS (ENSCJPG00005010186) BABAM2 (ENSCJPG00005010185) FOSL2 (ENSCJPG00005010184) PLB1 (ENSCJPG00005010182) PPP1CB (ENSCJPG00005010181) CALM2 (ENSCJPG00005010167) #22 TTC7A (ENSCJPG00005010166) #24 MCFD2 (ENSCJPG00005010165) #25 SOCS5 (ENSCJPG00005010163) #26 CRIPT (ENSCJPG00005010162) #27 PIGF (ENSCJPG00005010161) #28 RHOQ (ENSCJPG00005010160) #29 ENSCJPG00005010159 EPAS1 (ENSCJPG00005010157) PRKCE (ENSCJPG00005010156) #32 SRBD1 (ENSCJPG00005010155) #33 SIX2 (ENSCJPG00005010149) #34 SIX3 (ENSCJPG00005010147) #35 CAMKMT (ENSCJPG00005010141) #36 PREPL (ENSCJPG00005010140) #37 ENSCJPG00005010139 Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00960000189319 ENSGT00940000158103 ENSGT00940000156070.a.a Turkey MODERN SPECIES 11 ENSMGAG00000021098 ENSMGAG00000021812 ENSMGAG00000023018 ENSMGAG00000011525 ENSMGAG00000021226 ENSMGAG00000011527 ENSMGAG00000011545 ENSMGAG00000011557 ENSMGAG00000018471 ENSMGAG00000015834 ENSMGAG00000017342 ENSMGAG00000011593 FOSL2 (ENSMGAG00000022391) ENSMGAG00000010457 PPP1CB (ENSMGAG00000010432) CALM2 (ENSMGAG00000010413) #22 TTC7A (ENSMGAG00000010374) #24 MCFD2 (ENSMGAG00000010368) #25 SOCS5 (ENSMGAG00000010361) #26 CRIPT (ENSMGAG00000021110) #27 RHOQ (ENSMGAG00000010344) #29 PIGF (ENSMGAG00000010347) #28 ENSMGAG00000022287 EPAS1 (ENSMGAG00000010293) PRKCE (ENSMGAG00000010280) #32 SRBD1 (ENSMGAG00000010273) #33 CAMKMT (ENSMGAG00000010260) #36 PREPL (ENSMGAG00000010239) #37 ENSMGAG00000010226 PPM1B (ENSMGAG00000010220) ENSMGAG00000022631 Chicken MODERN SPECIES 22 KCNK17 (ENSGALG00010020136) KCNK16 (ENSGALG00010020134) KIF6 (ENSGALG00010020128) DAAM2 (ENSGALG00010020120) MOCS1 (ENSGALG00010020100) LRFN2 (ENSGALG00010020095) SUPT7L (ENSGALG00010020091) SLC4A1AP (ENSGALG00010020080) ENSGALG00010020074 MRPL33 (ENSGALG00010020030) RBKS (ENSGALG00010020057) BRE (ENSGALG00010021648) FOSL2 (ENSGALG00010020023) PLB1 (ENSGALG00010020006) PPP1CB (ENSGALG00010019972) CALM2 (ENSGALG00010019921) #22 MCFD2 (ENSGALG00010019878) #25 TTC7A (ENSGALG00010019855) #24 SOCS5 (ENSGALG00010018511) #26 CRIPT (ENSGALG00010018441) #27 PIGF (ENSGALG00010018427) #28 RHOQ (ENSGALG00010018420) #29 EPAS1 (ENSGALG00010018414) PRKCE (ENSGALG00010018393) #32 SRBD1 (ENSGALG00010018379) #33 ENSGALG00010018783 SIX3 (ENSGALG00010020532) #35 CAMKMT (ENSGALG00010020514) #36 ENSGALG00010020468 PREPL (ENSGALG00010020443) #37 SLC3A1 (ENSGALG00010020402) Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00960000189319 ENSGT00940000158103 Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a Great tit MODERN SPECIES 22 RHOQ (ENSPMJG00000014584) #29 PIGF (ENSPMJG00000014585) #28 CRIPT (ENSPMJG00000014586) #27 SOCS5 (ENSPMJG00000014588) #26 LRFN2 (ENSPMJG00000014591) SUPT7L (ENSPMJG00000014593) SLC4A1AP (ENSPMJG00000014594) ENSPMJG00000014595 ENSPMJG00000014596 ENSPMJG00000014599 RBKS (ENSPMJG00000014600) BABAM2 (ENSPMJG00000014601) FOSL2 (ENSPMJG00000014602) PLB1 (ENSPMJG00000014603) PPP1CB (ENSPMJG00000014604) CALM2 (ENSPMJG00000014606) #22 TTC7A (ENSPMJG00000014607) #24 MCFD2 (ENSPMJG00000014608) #25 ENSPMJG00000014609 ENSPMJG00000014610 DAAM2 (ENSPMJG00000014611) MOCS1 (ENSPMJG00000014614) SAYSD1 (ENSPMJG00000014617) GLP1R (ENSPMJG00000014618) DNAH8 (ENSPMJG00000014622) GLO1 (ENSPMJG00000014631) BTBD9 (ENSPMJG00000014632) ZFAND3 (ENSPMJG00000014633) MDGA1 (ENSPMJG00000014638) CCDC167 (ENSPMJG00000014796) CMTR1 (ENSPMJG00000014797) Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a Flycatcher MODERN SPECIES 21 EML4 (ENSFALG00000012618) COX7A2L (ENSFALG00000024901) KCNG3 (ENSFALG00000012630) MTA3 (ENSFALG00000024018) HAAO (ENSFALG00000012640) ENSFALG00000024879 THADA (ENSFALG00000012659) PLEKHH2 (ENSFALG00000012702) DYNC2LI1 (ENSFALG00000012712) ABCG5 (ENSFALG00000012720) ABCG8 (ENSFALG00000012731) LRPPRC (ENSFALG00000012738) FOSL2 (ENSFALG00000012753) ENSFALG00000012774 PPP1CB (ENSFALG00000027831) CALM2 (ENSFALG00000022948) #22 TTC7A (ENSFALG00000012839) #24 MCFD2 (ENSFALG00000012870) #25 SOCS5 (ENSFALG00000014436) #26 CRIPT (ENSFALG00000027404) #27 PIGF (ENSFALG00000012878) #28 RHOQ (ENSFALG00000012893) #29 EPAS1 (ENSFALG00000012916) PRKCE (ENSFALG00000012934) #32 SRBD1 (ENSFALG00000012966) #33 SIX2 (ENSFALG00000012971) #34 SIX3 (ENSFALG00000012979) #35 CAMKMT (ENSFALG00000012988) #36 PREPL (ENSFALG00000012993) #37 SLC3A1 (ENSFALG00000013003) PPM1B (ENSFALG00000013013) Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a Medium ground finch MODERN SPECIES 2 KCNK17 (ENSGFOG00000007871) KCNK16 (ENSGFOG00000007858) KIF6 (ENSGFOG00000007756) DAAM2 (ENSGFOG00000007726) MOCS1 (ENSGFOG00000007711) LRFN2 (ENSGFOG00000007706) SUPT7L (ENSGFOG00000007700) SLC4A1AP (ENSGFOG00000007676) ENSGFOG00000007661 ENSGFOG00000007646 RBKS (ENSGFOG00000007630) BABAM2 (ENSGFOG00000007621) FOSL2 (ENSGFOG00000007612) ENSGFOG00000007605 PPP1CB (ENSGFOG00000007596) CALM2 (ENSGFOG00000007590) #22 TTC7A (ENSGFOG00000006446) #24 MCFD2 (ENSGFOG00000006415) #25 SOCS5 (ENSGFOG00000006413) #26 CRIPT (ENSGFOG00000006411) #27 PIGF (ENSGFOG00000006400) #28 RHOQ (ENSGFOG00000006390) #29 EPAS1 (ENSGFOG00000006364) PRKCE (ENSGFOG00000006346) #32 SRBD1 (ENSGFOG00000006331) #33 CAMKMT (ENSGFOG00000006316) #36 PREPL (ENSGFOG00000006298) #37 ENSGFOG00000006288 ENSGFOG00000006282 PPM1B (ENSGFOG00000006276) LRPPRC (ENSGFOG00000006217) Passeroidea ANCESTRAL SPECIES ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a Common canary MODERN SPECIES 1 KCNK16 (ENSSCAG00000010883) KIF6 (ENSSCAG00000010863) DAAM2 (ENSSCAG00000010821) MOCS1 (ENSSCAG00000010805) LRFN2 (ENSSCAG00000010789) ENSSCAG00000010782 SUPT7L (ENSSCAG00000010777) SLC4A1AP (ENSSCAG00000010745) ENSSCAG00000010693 ENSSCAG00000010683 RBKS (ENSSCAG00000010670) BABAM2 (ENSSCAG00000010659) FOSL2 (ENSSCAG00000010651) ENSSCAG00000010630 PPP1CB (ENSSCAG00000010595) CALM2 (ENSSCAG00000010583) #22 TTC7A (ENSSCAG00000010574) #24 MCFD2 (ENSSCAG00000010567) #25 SOCS5 (ENSSCAG00000010563) #26 CRIPT (ENSSCAG00000010551) #27 PIGF (ENSSCAG00000010547) #28 RHOQ (ENSSCAG00000010541) #29 EPAS1 (ENSSCAG00000010532) PRKCE (ENSSCAG00000010524) #32 SRBD1 (ENSSCAG00000010496) #33 SIX2 (ENSSCAG00000010473) #34 SIX3 (ENSSCAG00000010461) #35 CAMKMT (ENSSCAG00000010436) #36 PREPL (ENSSCAG00000010431) #37 SLC3A1 (ENSSCAG00000010427) PPM1B (ENSSCAG00000010420) Zebra finch MODERN SPECIES 23 BTBD3 (ENSTGUG00000025475) KIF6 (ENSTGUG00000002485) DAAM2 (ENSTGUG00000002495) MOCS1 (ENSTGUG00000002508) LRFN2 (ENSTGUG00000023274) SUPT7L (ENSTGUG00000002523) SLC4A1AP (ENSTGUG00000002524) ENSTGUG00000022344 MRPL33 (ENSTGUG00000002538) RBKS (ENSTGUG00000020327) BABAM2 (ENSTGUG00000002543) FOSL2 (ENSTGUG00000024611) ENSTGUG00000019553 PLB1 (ENSTGUG00000002560) PPP1CB (ENSTGUG00000021535) CALM2 (ENSTGUG00000002581) #22 TTC7A (ENSTGUG00000002614) #24 MCFD2 (ENSTGUG00000019330) #25 SOCS5 (ENSTGUG00000002631) #26 ENSTGUG00000019339 CAPN8 (ENSTGUG00000002633) SUSD4 (ENSTGUG00000002646) ENSTGUG00000002653 DISP1 (ENSTGUG00000002654) BROX (ENSTGUG00000002660) AIDA (ENSTGUG00000002668) ENSTGUG00000002674 TAF1A (ENSTGUG00000002690) DUSP10 (ENSTGUG00000002705) HLX (ENSTGUG00000002708) MTARC2 (ENSTGUG00000002713) Neognathae_c DUPLICATION Neognathae_c ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.c #22 Kakapo MODERN SPECIES 2 KCNK16 (ENSSHBG00005015461) KIF6 (ENSSHBG00005015466) DAAM2 (ENSSHBG00005015473) MOCS1 (ENSSHBG00005015479) ENSSHBG00005015485 LRFN2 (ENSSHBG00005015496) SUPT7L (ENSSHBG00005015497) SLC4A1AP (ENSSHBG00005015502) ENSSHBG00005015508 ENSSHBG00005015517 RBKS (ENSSHBG00005000619) BABAM2 (ENSSHBG00005000621) FOSL2 (ENSSHBG00005000623) PPP1CB (ENSSHBG00005010459) CALM2 (ENSSHBG00005010491) #22 ENSSHBG00005010517 #22 TTC7A (ENSSHBG00005010553) #24 MCFD2 (ENSSHBG00005010588) #25 SOCS5 (ENSSHBG00005010607) #26 CRIPT (ENSSHBG00005010643) #27 PIGF (ENSSHBG00005010681) #28 RHOQ (ENSSHBG00005010722) #29 EPAS1 (ENSSHBG00005010795) PRKCE (ENSSHBG00005010866) #32 SRBD1 (ENSSHBG00005011167) #33 SIX2 (ENSSHBG00005013983) #34 SIX3 (ENSSHBG00005013994) #35 CAMKMT (ENSSHBG00005014000) #36 ENSSHBG00005014006 PREPL (ENSSHBG00005014015) #37 ENSSHBG00005014028 Neognathae_c ANCESTRAL SPECIES 5 ENSGT00940000162681 ENSGT00940000159813 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01030000235232 ENSGT00390000005743 ENSGT00390000004208 ENSGT00940000158876 ENSGT00530000063883 ENSGT00940000154644 ENSGT00950000182980.a.b.b.b.d #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00960000189319 ENSGT00940000158103 Kakapo MODERN SPECIES 2 ENSSHBG00005015458 KCNK16 (ENSSHBG00005015461) KIF6 (ENSSHBG00005015466) DAAM2 (ENSSHBG00005015473) MOCS1 (ENSSHBG00005015479) ENSSHBG00005015485 LRFN2 (ENSSHBG00005015496) SUPT7L (ENSSHBG00005015497) SLC4A1AP (ENSSHBG00005015502) ENSSHBG00005015508 ENSSHBG00005015517 RBKS (ENSSHBG00005000619) BABAM2 (ENSSHBG00005000621) FOSL2 (ENSSHBG00005000623) PPP1CB (ENSSHBG00005010459) CALM2 (ENSSHBG00005010491) #22 ENSSHBG00005010517 #22 TTC7A (ENSSHBG00005010553) #24 MCFD2 (ENSSHBG00005010588) #25 SOCS5 (ENSSHBG00005010607) #26 CRIPT (ENSSHBG00005010643) #27 PIGF (ENSSHBG00005010681) #28 RHOQ (ENSSHBG00005010722) #29 EPAS1 (ENSSHBG00005010795) PRKCE (ENSSHBG00005010866) #32 SRBD1 (ENSSHBG00005011167) #33 SIX2 (ENSSHBG00005013983) #34 SIX3 (ENSSHBG00005013994) #35 CAMKMT (ENSSHBG00005014000) #36 ENSSHBG00005014006 PREPL (ENSSHBG00005014015) #37 Golden eagle MODERN SPECIES 4 KCNK16 (ENSACCG00020010758) ENSACCG00020010743 KIF6 (ENSACCG00020010720) DAAM2 (ENSACCG00020010671) MOCS1 (ENSACCG00020010624) LRFN2 (ENSACCG00020010606) SUPT7L (ENSACCG00020010597) SLC4A1AP (ENSACCG00020010569) ENSACCG00020010532 ENSACCG00020010511 RBKS (ENSACCG00020010499) BABAM2 (ENSACCG00020010488) FOSL2 (ENSACCG00020010473) ENSACCG00020010462 PPP1CB (ENSACCG00020010452) CALM2 (ENSACCG00020010438) #22 TTC7A (ENSACCG00020010401) #24 MCFD2 (ENSACCG00020010349) #25 SOCS5 (ENSACCG00020010343) #26 ENSACCG00020010334 CRIPT (ENSACCG00020010328) #27 PIGF (ENSACCG00020010316) #28 RHOQ (ENSACCG00020010292) #29 EPAS1 (ENSACCG00020010251) PRKCE (ENSACCG00020010231) #32 SRBD1 (ENSACCG00020010207) #33 SIX2 (ENSACCG00020010194) #34 SIX3 (ENSACCG00020010184) #35 CAMKMT (ENSACCG00020010176) #36 PREPL (ENSACCG00020010157) #37 ENSACCG00020010138 Lepidosauria ANCESTRAL SPECIES ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 tuatara MODERN SPECIES 1450 ENSSPUG00000000221 ENSSPUG00000000225 ENSSPUG00000000237 ENSSPUG00000000249 ENSSPUG00000000260 ENSSPUG00000000315 MRPL2 (ENSSPUG00000000371) ENSSPUG00000000382 ENSSPUG00000000390 PTK7 (ENSSPUG00000000394) SRF (ENSSPUG00000000442) ENSSPUG00000000447 TTBK1 (ENSSPUG00000000500) ENSSPUG00000000547 SLC22A7 (ENSSPUG00000000567) CALM2 (ENSSPUG00000000690) #22 STPG4 (ENSSPUG00000000704) #23 TTC7A (ENSSPUG00000000722) #24 MCFD2 (ENSSPUG00000000762) #25 SOCS5 (ENSSPUG00000000766) #26 Episquamata ANCESTRAL SPECIES ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b.a ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 Laterata ANCESTRAL SPECIES 4 ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b.a ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a #31 ENSGT00390000002879.b #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 Common wall lizard MODERN SPECIES 11 ENSPMRG00000022095 KLHDC3 (ENSPMRG00000022089) RRP36 (ENSPMRG00000022078) ENSPMRG00000022068 ENSPMRG00000022051 ENSPMRG00000022012 MRPL2 (ENSPMRG00000021820) ENSPMRG00000021787 ENSPMRG00000021782 PTK7 (ENSPMRG00000021399) SRF (ENSPMRG00000021300) ENSPMRG00000021181 TTBK1 (ENSPMRG00000020984) ENSPMRG00000020850 SLC22A7 (ENSPMRG00000020825) CALM2 (ENSPMRG00000020807) #22 STPG4 (ENSPMRG00000020798) #23 TTC7A (ENSPMRG00000020772) #24 MCFD2 (ENSPMRG00000020762) #25 ENSPMRG00000020760 ENSPMRG00000020745 CRIPT (ENSPMRG00000020738) #27 PIGF (ENSPMRG00000020732) #28 RHOQ (ENSPMRG00000020726) #29 ENSPMRG00000020718 #31 ENSPMRG00000020714 #31 EPAS1 (ENSPMRG00000020671) PRKCE (ENSPMRG00000020640) #32 ENSPMRG00000020627 SRBD1 (ENSPMRG00000020574) #33 SIX2 (ENSPMRG00000020554) #34 Argentine black and white tegu MODERN SPECIES 7 ENSSMRG00000015950 ENSSMRG00000015951 ENSSMRG00000015953 MRPL2 (ENSSMRG00000017109) ENSSMRG00000017113 ENSSMRG00000017121 PTK7 (ENSSMRG00000017125) ENSSMRG00000017129 SRF (ENSSMRG00000017137) ENSSMRG00000017147 TTBK1 (ENSSMRG00000018329) ENSSMRG00000018330 SLC22A7 (ENSSMRG00000018411) ENSSMRG00000018446 ENSSMRG00000018447 CALM2 (ENSSMRG00000018448) #22 STPG4 (ENSSMRG00000018450) #23 TTC7A (ENSSMRG00000018453) #24 MCFD2 (ENSSMRG00000018462) #25 SOCS5 (ENSSMRG00000018467) #26 ENSSMRG00000018468 ENSSMRG00000018477 CRIPT (ENSSMRG00000018478) #27 PIGF (ENSSMRG00000018479) #28 RHOQ (ENSSMRG00000018480) #29 ENSSMRG00000018481 #31 ENSSMRG00000018482 #31 EPAS1 (ENSSMRG00000018484) PRKCE (ENSSMRG00000018487) #32 ENSSMRG00000018489 SRBD1 (ENSSMRG00000018493) #33 Toxicofera ANCESTRAL SPECIES ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b.a ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a.a #31 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 ENSGT00390000002168.rb #36 Lizard MODERN SPECIES 1 RRP36 (ENSACAG00000039112) ENSACAG00000005211 ENSACAG00000005149 MRPL2 (ENSACAG00000005134) ENSACAG00000039092 ENSACAG00000004964 ENSACAG00000004957 ENSACAG00000029657 PTK7 (ENSACAG00000004851) SRF (ENSACAG00000004798) ENSACAG00000004725 ENSACAG00000043520 TTBK1 (ENSACAG00000004636) ENSACAG00000004635 SLC22A7 (ENSACAG00000004528) CALM2 (ENSACAG00000043647) #22 STPG4 (ENSACAG00000041864) #23 TTC7A (ENSACAG00000004274) #24 MCFD2 (ENSACAG00000004264) #25 SOCS5 (ENSACAG00000004259) #26 ENSACAG00000035247 ENSACAG00000040078 PIGF (ENSACAG00000028483) #28 RHOQ (ENSACAG00000004164) #29 ENSACAG00000042040 #31 KLHL3 (ENSACAG00000017120) HNRNPA0 (ENSACAG00000017109) ENSACAG00000017107 ENSACAG00000017085 PKD2L2 (ENSACAG00000017025) FAM13B (ENSACAG00000028138) Elapidae ANCESTRAL SPECIES ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a.a #31 ENSGT00940000155930.a ENSGT00940000154711.tb.b #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 ENSGT00390000002168.rb #36 Indian cobra MODERN SPECIES KLHDC3 (ENSNNAG00000001855) ENSNNAG00000001876 ENSNNAG00000001884 RRP36 (ENSNNAG00000001896) ENSNNAG00000001908 ENSNNAG00000001930 ENSNNAG00000002020 MRPL2 (ENSNNAG00000002028) ENSNNAG00000002035 ENSNNAG00000002049 PTK7 (ENSNNAG00000002058) SRF (ENSNNAG00000002077) ENSNNAG00000002200 TTBK1 (ENSNNAG00000002481) SLC22A7 (ENSNNAG00000002494) CALM2 (ENSNNAG00000002517) #22 TTC7A (ENSNNAG00000002538) #24 MCFD2 (ENSNNAG00000002592) #25 SOCS5 (ENSNNAG00000002599) #26 ENSNNAG00000002603 CRIPT (ENSNNAG00000002612) #27 PIGF (ENSNNAG00000002614) #28 RHOQ (ENSNNAG00000002622) #29 EPAS1 (ENSNNAG00000002633) PRKCE (ENSNNAG00000002707) #32 ENSNNAG00000002726 SRBD1 (ENSNNAG00000002735) #33 SIX2 (ENSNNAG00000000304) #34 SIX3 (ENSNNAG00000000311) #35 CAMKMT (ENSNNAG00000000328) #36 PREPL (ENSNNAG00000000350) #37 Elapidae_a ANCESTRAL SPECIES 2 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a.a #31 ENSGT00940000155930.a ENSGT00940000154711.tb.b #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 ENSGT00390000002168.rb #36 Blue-lipped sea krait MODERN SPECIES 3499 CALM2 (ENSLLTG00000006135) #22 Acanthophiinae ANCESTRAL SPECIES 3 ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064271 ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 ENSGT00400000022158 ENSGT00940000153954.d.c ENSGT00940000160981 ENSGT00940000154922.b.n ENSGT00940000154922.b.m ENSGT00950000182980.a.b.b.b #22 ENSGT00390000008095 #23 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00390000002879.a.a #31 ENSGT00940000155930.a ENSGT00940000154711.tb.b #32 ENSGT00510000047850 #33 ENSGT00940000158292.a.f #34 ENSGT00940000160346.B #35 ENSGT00390000002168.rb #36 Mainland tiger snake MODERN SPECIES 3 MEA1 (ENSNSUG00000015769) KLHDC3 (ENSNSUG00000015768) RRP36 (ENSNSUG00000015767) ENSNSUG00000015766 ENSNSUG00000015765 ENSNSUG00000015764 MRPL2 (ENSNSUG00000015763) ENSNSUG00000015762 ENSNSUG00000015761 PTK7 (ENSNSUG00000015760) SRF (ENSNSUG00000015759) ENSNSUG00000015249 TTBK1 (ENSNSUG00000015248) ENSNSUG00000015247 ENSNSUG00000015246 CALM2 (ENSNSUG00000015245) #22 STPG4 (ENSNSUG00000015244) #23 TTC7A (ENSNSUG00000015243) #24 MCFD2 (ENSNSUG00000015242) #25 SOCS5 (ENSNSUG00000015241) #26 ENSNSUG00000015240 CRIPT (ENSNSUG00000015239) #27 PIGF (ENSNSUG00000015238) #28 RHOQ (ENSNSUG00000015237) #29 TMEM247 (ENSNSUG00000015236) #31 EPAS1 (ENSNSUG00000014622) ENSNSUG00000014617 PRKCE (ENSNSUG00000014616) #32 ENSNSUG00000014615 SRBD1 (ENSNSUG00000014575) #33 SIX2 (ENSNSUG00000014574) #34 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 18 MATCAP2 (ENSPTXG00000000873) ANLN (ENSPTXG00000000893) ELMO1 (ENSPTXG00000000925) ENSPTXG00000001544 NME8 (ENSPTXG00000001550) SFRP4 (ENSPTXG00000001554) EPDR1 (ENSPTXG00000001562) STARD3NL (ENSPTXG00000001565) ENSPTXG00000001567 AMPH (ENSPTXG00000001568) VPS41 (ENSPTXG00000001571) ENSPTXG00000001576 POU6F2 (ENSPTXG00000001581) ENSPTXG00000001585 RALA (ENSPTXG00000001587) ENSPTXG00000001589 #22 CDK13 (ENSPTXG00000001591) MPLKIP (ENSPTXG00000001593) SUGCT (ENSPTXG00000001594) ENSPTXG00000001595 ENSPTXG00000001599 ENSPTXG00000001602 GLI3 (ENSPTXG00000001606) ENSPTXG00000001608 ENSPTXG00000001610 ENSPTXG00000001613 ENSPTXG00000001615 ENSPTXG00000001618 ENSPTXG00000001621 C7orf25 (ENSPTXG00000001623) PSMA2 (ENSPTXG00000001626) Eastern brown snake MODERN SPECIES 5 MEA1 (ENSPTXG00000003810) KLHDC3 (ENSPTXG00000003807) RRP36 (ENSPTXG00000003805) ENSPTXG00000003803 ENSPTXG00000003798 ENSPTXG00000003795 MRPL2 (ENSPTXG00000003792) ENSPTXG00000003787 ENSPTXG00000003785 PTK7 (ENSPTXG00000001958) SRF (ENSPTXG00000001928) ENSPTXG00000001921 TTBK1 (ENSPTXG00000001901) ENSPTXG00000001899 ENSPTXG00000001898 ENSPTXG00000001897 #22 ENSPTXG00000001896 TTC7A (ENSPTXG00000001895) #24 MCFD2 (ENSPTXG00000001893) #25 SOCS5 (ENSPTXG00000001892) #26 ENSPTXG00000001891 CRIPT (ENSPTXG00000001889) #27 PIGF (ENSPTXG00000001888) #28 RHOQ (ENSPTXG00000001887) #29 TMEM247 (ENSPTXG00000001886) #31 EPAS1 (ENSPTXG00000001885) PRKCE (ENSPTXG00000001877) #32 SRBD1 (ENSPTXG00000001477) #33 SIX2 (ENSPTXG00000001463) #34 CAMKMT (ENSPTXG00000001455) #36 ENSPTXG00000001451 Anura DUPLICATION Anura ANCESTRAL SPECIES 111 ENSGT00950000182980.a.b.b.b.cc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Frog MODERN SPECIES 5 asb3 (ENSXETG00000015199) #8 nrxn1 (ENSXETG00000018835) #10 ENSXETG00000046661 fshr (ENSXETG00000025827) #12 lhcgr (ENSXETG00000022663) #13 gtf2a1l (ENSXETG00000022658) ston1 (ENSXETG00000034496) #14 ppp1r21 (ENSXETG00000022652) #15 foxn2 (ENSXETG00000045985) #16 fbxo11 (ENSXETG00000022644) #17 msh6 (ENSXETG00000022635) #18 kcnk12 (ENSXETG00000022624) #19 msh2 (ENSXETG00000022615) #20 epcam (ENSXETG00000022614) #21 ENSXETG00000039390 calm2 (ENSXETG00000015713) #22 stpg4 (ENSXETG00000036736) ttc7a (ENSXETG00000022746) #24 prop1 (ENSXETG00000036806) socs5 (ENSXETG00000048009) #26 mcfd2 (ENSXETG00000022745) #25 ENSXETG00000022741 cript (ENSXETG00000022737) #27 pigf (ENSXETG00000026168) #28 rhoq (ENSXETG00000022733) #29 epas1 (ENSXETG00000026167) prkce (ENSXETG00000041283) #32 XB5903316 [provisional:slc66a1] (ENSXETG00000002760) #33 six2 (ENSXETG00000026158) #34 six3 (ENSXETG00000002758) #35 camkmt (ENSXETG00000002754) #36 Leishan spiny toad MODERN SPECIES 7 CIAO2B (ENSLLEG00000013103) XDH (ENSLLEG00000012626) ENSLLEG00000012568 ENSLLEG00000012536 EHD3 (ENSLLEG00000012406) CAPN14 (ENSLLEG00000011974) KCNK12 (ENSLLEG00000011897) #19 ENSLLEG00000011874 MSH2 (ENSLLEG00000011713) #20 ENSLLEG00000011690 ENSLLEG00000011628 #21 ENSLLEG00000011603 ENSLLEG00000011073 ENSLLEG00000011003 ENSLLEG00000010979 ENSLLEG00000010840 #22 ENSLLEG00000010758 ENSLLEG00000010738 ENSLLEG00000010719 TTC7A (ENSLLEG00000009947) #24 ENSLLEG00000009859 MCFD2 (ENSLLEG00000009780) #25 ENSLLEG00000009730 ENSLLEG00000009702 SOCS5 (ENSLLEG00000009670) #26 ENSLLEG00000009657 ENSLLEG00000009630 ENSLLEG00000009579 CRIPT (ENSLLEG00000009471) #27 PIGF (ENSLLEG00000009325) #28 RHOQ (ENSLLEG00000009247) #29 Anura ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.b.dc #22 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 83 ENSLLEG00000022288 #22 ENSLLEG00000022218 #22 ENSLLEG00000022170 ENSLLEG00000022116 #22 ENSLLEG00000022088 #22 Leishan spiny toad MODERN SPECIES 83 ENSLLEG00000022288 #22 ENSLLEG00000022218 #22 ENSLLEG00000022170 ENSLLEG00000022116 #22 ENSLLEG00000022088 #22 Leishan spiny toad MODERN SPECIES 84 ENSLLEG00000022355 #22 ENSLLEG00000022323 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 83 ENSLLEG00000022288 #22 ENSLLEG00000022218 #22 ENSLLEG00000022170 ENSLLEG00000022116 #22 ENSLLEG00000022088 #22 Leishan spiny toad MODERN SPECIES 83 ENSLLEG00000022288 #22 ENSLLEG00000022218 #22 ENSLLEG00000022170 ENSLLEG00000022116 #22 ENSLLEG00000022088 #22 Coelacanth MODERN SPECIES 1138 ENSLACG00000003085 CALM2 (ENSLACG00000006675) #22 si:ch211-93n23.7 (ENSLACG00000022120) TTC7A (ENSLACG00000009970) #24 MCFD2 (ENSLACG00000012081) #25 ENSLACG00000012205 Actinopterygii ANCESTRAL SPECIES 55 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C.b.a #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00390000018245 #21 ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00990000212466 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000159000 #26 ENSGT00390000013481.c.b ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000159080 #8 ENSGT00940000177029 ENSGT00940000154292.a.b #10 ENSGT00940000163749 ENSGT00940000158952 #12 ENSGT00940000157364.C.b.a #13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.b #17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00550000074867 #20 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000159000 #26 ENSGT00390000013481.c.b.a ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00510000047850 #33 ENSGT00940000158292.a #34 ENSGT00940000160346.B #35 ENSGT00390000002168 #36 Spotted gar MODERN SPECIES 654 chac2 (ENSLOCG00000016270) #9 ASB3 (ENSLOCG00000016273) #8 nrxn1b (ENSLOCG00000016276) #10 fshr (ENSLOCG00000016280) #12 ENSLOCG00000016282 #13 STON1 (ENSLOCG00000016284) #14 ppp1r21 (ENSLOCG00000016286) #15 foxn2b (ENSLOCG00000016292) #16 FBXO11 (ENSLOCG00000016294) #17 msh6 (ENSLOCG00000016298) #18 KCNK12 (ENSLOCG00000016299) #19 msh2 (ENSLOCG00000016301) #20 epcam (ENSLOCG00000016306) #21 ENSLOCG00000016309 ENSLOCG00000016311 calm2a (ENSLOCG00000016313) #22 si:ch211-93n23.7 (ENSLOCG00000016315) TTC7A (ENSLOCG00000016316) #24 mcfd2 (ENSLOCG00000016322) #25 ENSLOCG00000016325 SOCS5 (ENSLOCG00000017363) #26 gch2 (ENSLOCG00000016326) cript (ENSLOCG00000016330) #27 pigf (ENSLOCG00000016331) #28 rhoq (ENSLOCG00000016335) #29 epas1b (ENSLOCG00000016337) PRKCE (ENSLOCG00000016351) #32 SRBD1 (ENSLOCG00000016360) #33 six2a (ENSLOCG00000016371) #34 six3a (ENSLOCG00000016373) #35 CAMKMT (ENSLOCG00000016374) #36 Osteoglossocephalai ANCESTRAL SPECIES 31 ENSGT00940000176000 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.a.a.a ##17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00390000018245 #21 ENSGT00940000164251 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000154573 ENSGT00940000156211.a.a ENSGT00440000033640 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00390000013481.c.b.b ENSGT00550000074867 #20 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.a ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000155930 ENSGT00940000154711 #32 ENSGT00940000154815.b.a ENSGT00940000159658.b.a Clupeocephala ANCESTRAL SPECIES 89 ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000154573 ENSGT00940000156211.a.a ENSGT00440000033640 ENSGT00940000162303.a.a ENSGT00940000165409.e.a ENSGT00940000164251 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00970000197742 Euteleosteomorpha ANCESTRAL SPECIES 33 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000164251 ENSGT00940000164218 ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Protacanthopterygii ANCESTRAL SPECIES 39 ENSGT00970000193390.c.b.b.a.m ENSGT00390000010899.a.b.b.a ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000164251 ENSGT00940000164218 ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00940000158240 ENSGT00390000015226.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 380 ENSGT00940000154815.b.b.f.b ENSGT00940000159658.b.b.d ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00390000013008.g ENSGT00940000161584.n ENSGT00390000018245.s #21 ENSGT00950000182980.a.b.b.b.ec #22 ENSGT00940000158638.d #24 ENSGT00940000154141.B.ib #25 ENSGT00940000165391.f ENSGT00940000164285.a.a ENSGT00390000013481.c.b.b ENSGT00940000155970.z.a #29 ENSGT00940000154537.lb.d ENSGT00390000016042 ENSGT00600000084626.f ENSGT00940000160573.j ENSGT00940000160735.a ENSGT00940000158240.o.b ENSGT00390000015226.d.j ENSGT00940000161547.b ENSGT01030000234549.a.b.h Salmoninae_a ANCESTRAL SPECIES 16 ENSGT01060000249975 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b.c.a ENSGT00990000210314 ENSGT00950000183075.a.a.a.a.r ENSGT00940000157303.e.g ENSGT00390000001205.a.c ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ENSGT00940000158434.d.a ENSGT00940000154815.b.b.f.a.a ENSGT00940000159658.b.b.d ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00390000013008.g ENSGT00940000161584.n ENSGT00390000018245.s #21 ENSGT00950000182980.a.b.b.b.ec #22 ENSGT00940000158638.d #24 ENSGT00940000154141.B.ib #25 ENSGT00940000165391.f ENSGT00940000164285.a.a ENSGT00390000013481.c.b.b ENSGT00940000155970.z.a #29 ENSGT00940000154537.lb.d ENSGT00390000016042 ENSGT00600000084626.f ENSGT00940000160573.j ENSGT00940000160735.a ENSGT00940000158240.o.b ENSGT00390000015226.d.j ENSGT00940000161547.b ENSGT01030000234549.a.b.h Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00390000011034.sc.a.b ENSGT00950000183075.a.a.a.a.r ENSGT00940000157303.e.g ENSGT00390000001205.a.c ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ENSGT00940000158434.d.a ENSGT00940000158434.d.b.b ENSGT00390000003039.f ENSGT00970000193390.c.b.b.a.m ENSGT00940000154815.b.b.f.b ENSGT00940000159658.b.b.d ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00390000013008.g ENSGT00940000161584.n ENSGT00390000018245.s #21 ENSGT00950000182980.a.b.b.b.ec #22 ENSGT00940000158638.d #24 ENSGT00940000154141.B.ib #25 ENSGT00940000165391.f ENSGT00940000164285.a.a ENSGT00390000013481.c.b.b ENSGT00940000155970.z.a #29 ENSGT00940000154537.lb.d ENSGT00390000016042 ENSGT00600000084626.f ENSGT00940000160573.j ENSGT00940000160735.a ENSGT00940000158240.o.b ENSGT00390000015226.d.j ENSGT00940000161547.b ENSGT01030000234549.a.b.h Rainbow trout MODERN SPECIES 15 ENSOMYG00000026458 prph2b (ENSOMYG00000025420) pkdcca (ENSOMYG00000025394) ENSOMYG00000064619 ENSOMYG00000064175 EML4 (ENSOMYG00000013339) ENSOMYG00000012476 ENSOMYG00000012471 ENSOMYG00000012449 KCNG3 (ENSOMYG00000012443) ENSOMYG00000012438 ENSOMYG00000055884 ENSOMYG00000063290 ENSOMYG00000064896 ENSOMYG00000012390 #21 calm2a (ENSOMYG00000012322) #22 ENSOMYG00000058731 TTC7A (ENSOMYG00000012288) #24 mcfd2 (ENSOMYG00000050235) #25 ENSOMYG00000068287 ENSOMYG00000077054 socs5b (ENSOMYG00000012267) ENSOMYG00000012258 ENSOMYG00000012239 #29 ENSOMYG00000074589 ENSOMYG00000012225 ENSOMYG00000012186 ENSOMYG00000046908 PWWP2B (ENSOMYG00000046890) ENSOMYG00000063531 ENSOMYG00000071412 Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155310.a.b.c.a ENSGT00990000210314 ENSGT00390000011034.sc.a.b ENSGT00950000183075.a.a.a.a.r ENSGT00940000157303.e.g ENSGT00390000001205.a.c ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ENSGT00940000158434.d.b.b ENSGT00390000003039.f ENSGT00940000154815.b.b.f.b ENSGT00940000159658.b.b.d ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00390000013008.g ENSGT00940000161584.n ENSGT00390000018245.s #21 ENSGT00950000182980.a.b.b.b.ec #22 ENSGT00940000158638.d #24 ENSGT00940000154141.B.ib #25 ENSGT00940000165391.f ENSGT00940000164285.a.a ENSGT00390000013481.c.b.b ENSGT00940000155970.z.a #29 ENSGT00940000154537.lb.d ENSGT00390000016042 ENSGT00600000084626.f ENSGT00940000160573.j ENSGT00940000160735.a ENSGT00940000158240.o.b ENSGT00390000015226.d.j ENSGT00940000161547.b ENSGT01030000234549.a.b.h Chinook salmon MODERN SPECIES 2883 epcam (ENSOTSG00005019142) #21 calm2a (ENSOTSG00005019140) #22 ENSOTSG00005019139 #24 Coho salmon MODERN SPECIES 2 ENSOKIG00005002803 UBR2 (ENSOKIG00005003086) prph2b (ENSOKIG00005003683) pkdcca (ENSOKIG00005003689) ENSOKIG00005003700 EML4 (ENSOKIG00005003765) ENSOKIG00005004086 ENSOKIG00005004093 COX7A2L (ENSOKIG00005004104) KCNG3 (ENSOKIG00005004108) ENSOKIG00005004113 OXER1 (ENSOKIG00005004115) haao (ENSOKIG00005004125) zfp36l2 (ENSOKIG00005004145) epcam (ENSOKIG00005004156) #21 calm2a (ENSOKIG00005004174) #22 TTC7A (ENSOKIG00005004215) #24 mcfd2 (ENSOKIG00005004332) #25 ENSOKIG00005004349 socs5b (ENSOKIG00005004398) ENSOKIG00005004413 rhoq (ENSOKIG00005004429) #29 mxtx1 (ENSOKIG00005004453) tmem254 (ENSOKIG00005004484) ENSOKIG00005004508 STK32C (ENSOKIG00005004630) ENSOKIG00005005035 PWWP2B (ENSOKIG00005005038) CSAD (ENSOKIG00005005205) INPP5A (ENSOKIG00005006436) nkx6.2 (ENSOKIG00005006572) Salmo ANCESTRAL SPECIES 23 ENSGT00950000183075.a.a.a.a.r ENSGT00940000157303.e.g ENSGT00390000001205.a.c ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ENSGT00940000158434.d.a ENSGT00390000003039.f ENSGT00970000193390.c.b.b.a.m ENSGT00940000164656.b.b.a.a.a.a.`b.a ENSGT00940000154815.b.b.f.a.a ENSGT00940000159658.b.b.d ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00390000013008.g ENSGT00940000161584.n ENSGT00940000157675.c ENSGT00390000018245.s #21 ENSGT00950000182980.a.b.b.b.ec #22 ENSGT00940000158638.d #24 ENSGT00940000154141.B.ib #25 ENSGT00970000197742 ENSGT00940000164285.a.a ENSGT00390000013481.c.b.b ENSGT00940000155970.z.a #29 ENSGT00940000154537.lb.d ENSGT00390000016042 ENSGT00600000084626.f ENSGT00940000160573.j ENSGT00940000160735.a ENSGT00940000158240.o.b ENSGT00390000015226.d.j ENSGT00940000161547.b ENSGT01030000234549.a.b.h River trout MODERN SPECIES 9 prph2b (ENSSTUG00000013857) pkdcca (ENSSTUG00000013852) ENSSTUG00000013848 EML4 (ENSSTUG00000012648) ENSSTUG00000012570 ENSSTUG00000012561 ENSSTUG00000012553 ENSSTUG00000012547 COX7A2L (ENSSTUG00000012531) KCNG3 (ENSSTUG00000012507) OXER1 (ENSSTUG00000012504) haao (ENSSTUG00000012482) ENSSTUG00000012476 zfp36l2 (ENSSTUG00000012467) epcam (ENSSTUG00000012415) #21 calm2a (ENSSTUG00000012369) #22 TTC7A (ENSSTUG00000012255) #24 mcfd2 (ENSSTUG00000012244) #25 prop1 (ENSSTUG00000012235) ENSSTUG00000012192 ENSSTUG00000012154 rhoq (ENSSTUG00000012127) #29 mxtx1 (ENSSTUG00000012120) tmem254 (ENSSTUG00000012106) ENSSTUG00000012069 STK32C (ENSSTUG00000011947) PWWP2B (ENSSTUG00000011936) csad (ENSSTUG00000010245) INPP5A (ENSSTUG00000009965) nkx6.2 (ENSSTUG00000009952) valopa (ENSSTUG00000009926) Atlantic salmon MODERN SPECIES pkdcc (ENSSSAG00000028618) ENSSSAG00000028365 ENSSSAG00000027035 EML4 (ENSSSAG00000040250) ENSSSAG00000001448 ENSSSAG00000001444 ENSSSAG00000001436 COX7A2L (ENSSSAG00000001433) KCNG3 (ENSSSAG00000120609) OXER1 (ENSSSAG00000120100) ENSSSAG00000103084 ENSSSAG00000107312 ZFP36L2 (ENSSSAG00000101693) ENSSSAG00000103031 ENSSSAG00000001412 #21 calm2a (ENSSSAG00000001376) #22 TTC7A (ENSSSAG00000001340) #24 mcfd2 (ENSSSAG00000001329) #25 prop1 (ENSSSAG00000001323) socs5b (ENSSSAG00000097820) ENSSSAG00000001313 rhoq (ENSSSAG00000001304) #29 ENSSSAG00000121086 tmem254 (ENSSSAG00000001290) ENSSSAG00000001279 ENSSSAG00000001166 pwwp2b (ENSSSAG00000001133) ENSSSAG00000000768 nkx6.2 (ENSSSAG00000084986) INPP5A (ENSSSAG00000000258) valopa (ENSSSAG00000000113) Huchen MODERN SPECIES 74 ENSHHUG00000038572 EML4 (ENSHHUG00000038657) ENSHHUG00000040448 COX7A2L (ENSHHUG00000040456) KCNG3 (ENSHHUG00000040469) ENSHHUG00000040471 OXER1 (ENSHHUG00000040475) haao (ENSHHUG00000040478) zfp36l2 (ENSHHUG00000040531) epcam (ENSHHUG00000040535) #21 calm2a (ENSHHUG00000040562) #22 TTC7A (ENSHHUG00000041004) #24 mcfd2 (ENSHHUG00000041017) #25 prop1 (ENSHHUG00000041021) socs5b (ENSHHUG00000041025) ENSHHUG00000041029 rhoq (ENSHHUG00000041034) #29 mxtx1 (ENSHHUG00000041041) tmem254 (ENSHHUG00000041042) ENSHHUG00000041045 STK32C (ENSHHUG00000041048) PWWP2B (ENSHHUG00000041071) Salmoninae ANCESTRAL SPECIES 61 ENSGT00390000003039 ENSGT00970000193390.c.b.b.a.m ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245.t #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.fc #22 ENSGT00940000167263 ENSGT00940000158638.c #24 ENSGT00940000154141.B.hb #25 ENSGT00940000165391.e ENSGT00940000164285.a.b ENSGT00940000155970.z.b #29 ENSGT00940000154537.lb.c ENSGT00600000084626.e ENSGT00940000160573.i ENSGT00390000007203 ENSGT00940000160735.b ENSGT00940000158240.o.a.a ENSGT00390000015226.d.i ENSGT00940000161547.a ENSGT01030000234549.a.b.g Huchen MODERN SPECIES 10 OXER1 (ENSHHUG00000020399) ENSHHUG00000020401 ENSHHUG00000020412 ENSHHUG00000020431 st8sia7.1 (ENSHHUG00000020434) zfp36l2 (ENSHHUG00000020438) THADA (ENSHHUG00000020448) thada (ENSHHUG00000020499) PLEKHH2 (ENSHHUG00000020514) ENSHHUG00000020678 epcam (ENSHHUG00000020680) #21 ENSHHUG00000020697 ENSHHUG00000020702 ENSHHUG00000020704 ENSHHUG00000020712 calm2a (ENSHHUG00000020730) #22 si:ch211-93n23.7 (ENSHHUG00000020883) TTC7A (ENSHHUG00000020888) #24 mcfd2 (ENSHHUG00000020904) #25 ENSHHUG00000020907 socs5b (ENSHHUG00000020918) rhoq (ENSHHUG00000020923) #29 mxtx1 (ENSHHUG00000020946) ENSHHUG00000020947 STK32C (ENSHHUG00000020972) LRRC27 (ENSHHUG00000021016) PWWP2B (ENSHHUG00000021051) csad (ENSHHUG00000021064) INPP5A (ENSHHUG00000021230) nkx6.2 (ENSHHUG00000021277) valopa (ENSHHUG00000021286) Salmoninae_a ANCESTRAL SPECIES 71 ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245.t #21 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.fc #22 ENSGT00940000167263 ENSGT00940000158638.c #24 ENSGT00940000154141.B.hb #25 ENSGT00940000165391.e ENSGT00940000164285.a.b ENSGT00940000155970.z.b #29 ENSGT00940000154537.lb.c ENSGT00600000084626.e ENSGT00940000160573.i ENSGT00390000007203 ENSGT00940000160735.b ENSGT00940000158240.o.a.a ENSGT00390000015226.d.i ENSGT00940000161547.a ENSGT01030000234549.a.b.g Salmo ANCESTRAL SPECIES 29 ENSGT00390000001205.a.d ENSGT00390000003738.b.d.a.c.b ENSGT00940000158434.d.b.a.a ENSGT00390000003039.e ENSGT00940000159658.b.b.c ENSGT00940000154815.b.b.f.a.b ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675.d ENSGT00390000018245.t #21 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.fc #22 ENSGT00940000167263 ENSGT00940000158638.c #24 ENSGT00940000154141.B.hb #25 ENSGT00940000165391.e ENSGT00940000164285.a.b ENSGT00940000155970.z.b #29 ENSGT00940000154537.lb.c ENSGT00600000084626.e ENSGT00940000160573.i ENSGT00390000007203 ENSGT00940000160735.b ENSGT00940000158240.o.a.a ENSGT00390000015226.d.i ENSGT00940000161547.a ENSGT01030000234549.a.b.g River trout MODERN SPECIES 35 ENSSTUG00000000515 ENSSTUG00000000518 ENSSTUG00000000521 ENSSTUG00000000529 KCNG3 (ENSSTUG00000000532) COX7A2L (ENSSTUG00000000537) OXER1 (ENSSTUG00000000546) ENSSTUG00000000553 ENSSTUG00000000561 st8sia7.1 (ENSSTUG00000000568) zfp36l2 (ENSSTUG00000000573) THADA (ENSSTUG00000000575) PLEKHH2 (ENSSTUG00000000635) epcam (ENSSTUG00000000818) #21 ENSSTUG00000000836 calm2a (ENSSTUG00000000846) #22 si:ch211-93n23.7 (ENSSTUG00000000852) TTC7A (ENSSTUG00000000889) #24 mcfd2 (ENSSTUG00000000972) #25 ENSSTUG00000000979 socs5b (ENSSTUG00000000983) rhoq (ENSSTUG00000000990) #29 mxtx1 (ENSSTUG00000000998) ENSSTUG00000001011 ENSSTUG00000001013 STK32C (ENSSTUG00000001052) LRRC27 (ENSSTUG00000001132) PWWP2B (ENSSTUG00000001147) csad (ENSSTUG00000001209) INPP5A (ENSSTUG00000001855) nkx6.2 (ENSSTUG00000002355) Atlantic salmon MODERN SPECIES 9 ENSSSAG00000040016 ENSSSAG00000040002 ENSSSAG00000101524 G109A (ENSSSAG00000039943) ENSSSAG00000089174 ENSSSAG00000039893 ENSSSAG00000099595 ENSSSAG00000069181 ZFP36L2 (ENSSSAG00000093600) THADA (ENSSSAG00000068463) PLEKHH2 (ENSSSAG00000067417) ENSSSAG00000085414 epcam (ENSSSAG00000067375) #21 ENSSSAG00000102735 ENSSSAG00000105095 calm2a (ENSSSAG00000067318) #22 cssa18h2orf61 (ENSSSAG00000067311) ENSSSAG00000097460 TTC7A (ENSSSAG00000067301) #24 ENSSSAG00000067292 ENSSSAG00000067289 ENSSSAG00000122159 #29 ENSSSAG00000112162 ENSSSAG00000067266 ENSSSAG00000086684 STK32C (ENSSSAG00000067124) ENSSSAG00000104485 PWWP2B (ENSSSAG00000067115) ENSSSAG00000065855 INPP5A (ENSSSAG00000065803) nkx6.2 (ENSSSAG00000065797) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00390000003738.b.d.a.c.b ENSGT00940000158434.d.b.a.a ENSGT00390000003039.e ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245.t #21 ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b.fc #22 ENSGT00940000167263 ENSGT00940000158638.c #24 ENSGT00940000154141.B.hb #25 ENSGT00940000165391.e ENSGT00940000164285.a.b ENSGT00940000155970.z.b #29 ENSGT00940000154537.lb.c ENSGT00600000084626.e ENSGT00940000160573.i ENSGT00390000007203 ENSGT00940000160735.b ENSGT00940000158240.o.a.a ENSGT00390000015226.d.i ENSGT00940000161547.a ENSGT01030000234549.a.b.g Rainbow trout MODERN SPECIES ENSOMYG00000050070 ENSOMYG00000026664 COX7A2L (ENSOMYG00000026655) KCNG3 (ENSOMYG00000026642) OXER1 (ENSOMYG00000012440) ENSOMYG00000026637 HAAO (ENSOMYG00000026593) ENSOMYG00000026580 ZFP36L2 (ENSOMYG00000026565) THADA (ENSOMYG00000026407) ENSOMYG00000070189 PLEKHH2 (ENSOMYG00000026191) epcam (ENSOMYG00000026064) #21 ENSOMYG00000026049 ENSOMYG00000050448 calm2a (ENSOMYG00000025867) #22 si:ch211-93n23.7 (ENSOMYG00000025740) TTC7A (ENSOMYG00000025716) #24 mcfd2 (ENSOMYG00000025666) #25 ENSOMYG00000025655 socs5b (ENSOMYG00000025644) ENSOMYG00000025627 #29 ENSOMYG00000025603 ENSOMYG00000069861 STK32C (ENSOMYG00000025216) LRRC27 (ENSOMYG00000024922) PWWP2B (ENSOMYG00000024888) ENSOMYG00000024325 INPP5A (ENSOMYG00000023695) nkx6.2 (ENSOMYG00000023516) valopa (ENSOMYG00000023494) Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000155368.g.a.a ENSGT00970000193390.c.b.b.b.a.v ENSGT00970000193390.c.b.b.a.l.b.a ENSGT01030000234583.a.a.c.b.a.a.b.c ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245.t #21 ENSGT00940000164251 ENSGT00950000182980.a.b.b.b.fc #22 ENSGT00940000167263 ENSGT00940000158638.c #24 ENSGT00940000154141.B.hb #25 ENSGT00940000165391.e ENSGT00940000164285.a.b ENSGT00940000155970.z.b #29 ENSGT00940000154537.lb.c ENSGT00600000084626.e ENSGT00940000160573.i ENSGT00390000007203 ENSGT00940000160735.b ENSGT00940000158240.o.a.a ENSGT00390000015226.d.i ENSGT00940000161547.a ENSGT01030000234549.a.b.g Coho salmon MODERN SPECIES 24 ENSOKIG00005000078 COX7A2L (ENSOKIG00005000069) KCNG3 (ENSOKIG00005000059) OXER1 (ENSOKIG00005000045) ENSOKIG00005000034 HAAO (ENSOKIG00005000015) st8sia7.1 (ENSOKIG00005012471) ENSOKIG00005012464 ZFP36L2 (ENSOKIG00005012451) THADA (ENSOKIG00005011986) PLEKHH2 (ENSOKIG00005011752) epcam (ENSOKIG00005011682) #21 ENSOKIG00005011671 ENSOKIG00005011651 ENSOKIG00005011637 calm2a (ENSOKIG00005011574) #22 si:ch211-93n23.7 (ENSOKIG00005011548) TTC7A (ENSOKIG00005011519) #24 ENSOKIG00005011497 socs5b (ENSOKIG00005011485) ENSOKIG00005011443 #29 ENSOKIG00005011432 mcfd2 (ENSOKIG00005011417) #25 ENSOKIG00005011401 ENSOKIG00005011149 LRRC27 (ENSOKIG00005011091) PWWP2B (ENSOKIG00005011077) csad (ENSOKIG00005010723) INPP5A (ENSOKIG00005010375) nkx6.2 (ENSOKIG00005010347) ENSOKIG00005010345 Chinook salmon MODERN SPECIES 30 EML4 (ENSOTSG00005020413) ENSOTSG00005020407 ENSOTSG00005020404 ENSOTSG00005020403 COX7A2L (ENSOTSG00005020402) KCNG3 (ENSOTSG00005020401) ENSOTSG00005020399 st8sia7.1 (ENSOTSG00005020398) zfp36l2 (ENSOTSG00005020396) ENSOTSG00005020132 PLEKHH2 (ENSOTSG00005020085) epcam (ENSOTSG00005020058) #21 ENSOTSG00005020054 ENSOTSG00005020053 ENSOTSG00005020052 calm2a (ENSOTSG00005020051) #22 si:ch211-93n23.7 (ENSOTSG00005020050) TTC7A (ENSOTSG00005045631) #24 mcfd2 (ENSOTSG00005045630) #25 ENSOTSG00005045629 rhoq (ENSOTSG00005045627) #29 mxtx1 (ENSOTSG00005045626) ENSOTSG00005045624 STK32C (ENSOTSG00005045461) ENSOTSG00005045458 PWWP2B (ENSOTSG00005045456) csad (ENSOTSG00005045122) INPP5A (ENSOTSG00005045087) nkx6.2 (ENSOTSG00005045086) valopa (ENSOTSG00005045085) ENSOTSG00005045083 Northern pike MODERN SPECIES 5 ENSELUG00000024859 ENSELUG00000016020 ENSELUG00000026063 COX7A2L (ENSELUG00000016004) KCNG3 (ENSELUG00000015977) OXER1 (ENSELUG00000015970) ENSELUG00000025235 haao (ENSELUG00000015957) ENSELUG00000028243 zfp36l2 (ENSELUG00000000600) THADA (ENSELUG00000015922) PLEKHH2 (ENSELUG00000015877) epcam (ENSELUG00000015828) #21 ENSELUG00000015812 ENSELUG00000000596 calm2a (ENSELUG00000015760) #22 si:ch211-93n23.7 (ENSELUG00000015705) TTC7A (ENSELUG00000015680) #24 mcfd2 (ENSELUG00000015627) #25 ENSELUG00000027306 socs5b (ENSELUG00000015618) usp54a (ENSELUG00000015585) myoz1a (ENSELUG00000015478) SYNPO2L (ENSELUG00000015472) zgc:153169 (ENSELUG00000015448) ENSELUG00000015413 cep68 (ENSELUG00000015396) ENSELUG00000024705 tlx1 (ENSELUG00000015373) ENSELUG00000015360 slc2a15a (ENSELUG00000000563) Acanthomorphata ANCESTRAL SPECIES 45 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Cod MODERN SPECIES 6 SANBR (ENSGMOG00000019047) ENSGMOG00000035432 PEX13 (ENSGMOG00000019037) ENSGMOG00000018800 PAPOLG (ENSGMOG00000018772) OXER1 (ENSGMOG00000018757) ENSGMOG00000020299 ENSGMOG00000026027 haao (ENSGMOG00000018752) haao (ENSGMOG00000034156) ZFP36L2 (ENSGMOG00000029927) THADA (ENSGMOG00000006981) PLEKHH2 (ENSGMOG00000006939) epcam (ENSGMOG00000006927) #21 ENSGMOG00000006917 calm2a (ENSGMOG00000035072) #22 ENSGMOG00000023737 TTC7A (ENSGMOG00000029809) #24 ENSGMOG00000006867 #24 mcfd2 (ENSGMOG00000026763) #25 ENSGMOG00000006852 ENSGMOG00000029837 #29 ENSGMOG00000023749 ENSGMOG00000001725 ENSGMOG00000001694 STK32C (ENSGMOG00000001734) ENSGMOG00000036145 PWWP2B (ENSGMOG00000001770) nkx6.2 (ENSGMOG00000033363) valopa (ENSGMOG00000009622) ENSGMOG00000035697 Euacanthomorphacea ANCESTRAL SPECIES 32 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000155076.b.b ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000164218 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Pinecone sodierfish MODERN SPECIES 6 SANBR (ENSMMDG00005008566) pex13 (ENSMMDG00005008563) REL (ENSMMDG00005008558) papolg (ENSMMDG00005008548) OXER1 (ENSMMDG00005008535) ENSMMDG00005008532 haao (ENSMMDG00005008395) ENSMMDG00005008378 ENSMMDG00005008372 zfp36l2 (ENSMMDG00005008368) THADA (ENSMMDG00005008252) PLEKHH2 (ENSMMDG00005008226) epcam (ENSMMDG00005008218) #21 ENSMMDG00005008216 ENSMMDG00005008208 calm2a (ENSMMDG00005021233) #22 si:ch211-93n23.7 (ENSMMDG00005021220) TTC7A (ENSMMDG00005021216) #24 mcfd2 (ENSMMDG00005021213) #25 ENSMMDG00005021212 socs5b (ENSMMDG00005021211) rhoq (ENSMMDG00005021207) #29 mxtx1 (ENSMMDG00005021204) tmem254 (ENSMMDG00005021203) ENSMMDG00005021198 STK32C (ENSMMDG00005021182) LRRC27 (ENSMMDG00005021176) PWWP2B (ENSMMDG00005021175) INPP5A (ENSMMDG00005020875) nkx6.2 (ENSMMDG00005020858) valopa (ENSMMDG00005020837) Percomorphaceae ANCESTRAL SPECIES 30 ENSGT00940000158034 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000164218 ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Tiger tail seahorse MODERN SPECIES 312 ENSHCOG00000006964 XPO1 (ENSHCOG00000006949) SANBR (ENSHCOG00000006910) pex13 (ENSHCOG00000006878) REL (ENSHCOG00000006855) papolg (ENSHCOG00000006782) lhb (ENSHCOG00000006769) zfp36l2 (ENSHCOG00000006757) ENSHCOG00000006725 PLEKHH2 (ENSHCOG00000006515) epcam (ENSHCOG00000006442) #21 epcam (ENSHCOG00000006436) #21 ENSHCOG00000006422 ENSHCOG00000006399 ENSHCOG00000006387 calm2a (ENSHCOG00000006363) #22 ENSHCOG00000006353 TTC7A (ENSHCOG00000006324) #24 ENSHCOG00000006192 haao (ENSHCOG00000006185) ENSHCOG00000006175 socs5b (ENSHCOG00000006168) ENSHCOG00000006164 rhoq (ENSHCOG00000006151) #29 mxtx1 (ENSHCOG00000006137) ENSHCOG00000006124 ENSHCOG00000006113 STK32C (ENSHCOG00000006092) PWWP2B (ENSHCOG00000006074) INPP5A (ENSHCOG00000006054) nkx6.2 (ENSHCOG00000006009) Percomorphaceae_B ANCESTRAL SPECIES 24 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00940000164251 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00940000164251 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Ovalentaria_B ANCESTRAL SPECIES 25 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00940000164251 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Pomacentridae ANCESTRAL SPECIES 36 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000164218 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00940000164251 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Pomacentridae_A ANCESTRAL SPECIES 41 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000164218 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00940000164251 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Amphiprion ANCESTRAL SPECIES 47 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00940000180563 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Clown anemonefish MODERN SPECIES 1387 PLEKHH2 (ENSAOCG00000019969) epcam (ENSAOCG00000019848) #21 ENSAOCG00000001458 ENSAOCG00000019800 calm2a (ENSAOCG00000019760) #22 si:ch211-93n23.7 (ENSAOCG00000019752) TTC7A (ENSAOCG00000019727) #24 mcfd2 (ENSAOCG00000019688) #25 ENSAOCG00000001430 socs5b (ENSAOCG00000019658) rhoq (ENSAOCG00000019651) #29 mxtx1 (ENSAOCG00000019625) tmem254 (ENSAOCG00000019611) ENSAOCG00000019597 STK32C (ENSAOCG00000019548) ENSAOCG00000019500 PWWP2B (ENSAOCG00000019478) Orange clownfish MODERN SPECIES 12 pex13 (ENSAPEG00000006970) REL (ENSAPEG00000006957) papolg (ENSAPEG00000006944) haao (ENSAPEG00000006928) ENSAPEG00000006917 ENSAPEG00000006897 zfp36l2 (ENSAPEG00000006879) ENSAPEG00000006867 ENSAPEG00000006745 PLEKHH2 (ENSAPEG00000006640) epcam (ENSAPEG00000006604) #21 ENSAPEG00000006578 ENSAPEG00000006565 ENSAPEG00000006548 ENSAPEG00000006493 calm2a (ENSAPEG00000006472) #22 si:ch211-93n23.7 (ENSAPEG00000006439) TTC7A (ENSAPEG00000006408) #24 mcfd2 (ENSAPEG00000006376) #25 ENSAPEG00000006362 socs5b (ENSAPEG00000006338) rhoq (ENSAPEG00000006311) #29 mxtx1 (ENSAPEG00000006288) tmem254 (ENSAPEG00000006280) ENSAPEG00000006236 STK32C (ENSAPEG00000006194) ENSAPEG00000006153 PWWP2B (ENSAPEG00000006145) INPP5A (ENSAPEG00000006102) nkx6.2 (ENSAPEG00000006080) valopa (ENSAPEG00000006064) Spiny chromis MODERN SPECIES 123 thada (ENSAPOG00000010107) PLEKHH2 (ENSAPOG00000010024) epcam (ENSAPOG00000009918) #21 ENSAPOG00000000285 ENSAPOG00000009849 ENSAPOG00000009834 ENSAPOG00000000282 calm2a (ENSAPOG00000009748) #22 si:ch211-93n23.7 (ENSAPOG00000009704) TTC7A (ENSAPOG00000009662) #24 mcfd2 (ENSAPOG00000009312) #25 ENSAPOG00000009292 socs5b (ENSAPOG00000009270) rhoq (ENSAPOG00000009259) #29 ENSAPOG00000009230 tmem254 (ENSAPOG00000009212) ENSAPOG00000009208 ENSAPOG00000009171 ENSAPOG00000009142 STK32C (ENSAPOG00000009112) ENSAPOG00000000250 PWWP2B (ENSAPOG00000009027) INPP5A (ENSAPOG00000009000) Bicolor damselfish MODERN SPECIES 311 ENSSPAG00000008688 XPO1 (ENSSPAG00000008738) SANBR (ENSSPAG00000008889) pex13 (ENSSPAG00000008962) REL (ENSSPAG00000008979) papolg (ENSSPAG00000009004) haao (ENSSPAG00000009062) ENSSPAG00000009075 ENSSPAG00000009080 zfp36l2 (ENSSPAG00000009096) ENSSPAG00000009108 PLEKHH2 (ENSSPAG00000009167) epcam (ENSSPAG00000009236) #21 ENSSPAG00000009262 ENSSPAG00000009292 calm2a (ENSSPAG00000009320) #22 si:ch211-93n23.7 (ENSSPAG00000009344) Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883.h ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883.h ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Haplochromini_B ANCESTRAL SPECIES 59 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883.h ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245.m.a #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Zebra mbuna MODERN SPECIES 1095 XPO1 (ENSMZEG00005018158) ENSMZEG00005018155 SANBR (ENSMZEG00005018150) pex13 (ENSMZEG00005018148) rel (ENSMZEG00005018144) papolg (ENSMZEG00005018140) haao (ENSMZEG00005018135) ENSMZEG00005018133 OXER1 (ENSMZEG00005018131) zfp36l2 (ENSMZEG00005018129) ENSMZEG00005018122 PLEKHH2 (ENSMZEG00005018115) epcam (ENSMZEG00005018110) #21 epcam (ENSMZEG00005018107) #21 ENSMZEG00005018104 calm2a (ENSMZEG00005018099) #22 si:ch211-93n23.7 (ENSMZEG00005018098) TTC7A (ENSMZEG00005018070) #24 mcfd2 (ENSMZEG00005018060) #25 ENSMZEG00005018057 socs5b (ENSMZEG00005018055) rhoq (ENSMZEG00005018052) #29 ENSMZEG00005018050 ENSMZEG00005018049 ENSMZEG00005018046 STK32C (ENSMZEG00005018031) LRRC27 (ENSMZEG00005018023) PWWP2B (ENSMZEG00005018021) INPP5A (ENSMZEG00005018019) nkx6.2 (ENSMZEG00005018013) valopa (ENSMZEG00005012467) Eastern happy MODERN SPECIES 4 rel (ENSACLG00000015545) papolg (ENSACLG00000015592) haao (ENSACLG00000015648) ENSACLG00000015704 ENSACLG00000015716 OXER1 (ENSACLG00000015728) zfp36l2 (ENSACLG00000015842) ENSACLG00000015898 PLEKHH2 (ENSACLG00000016220) epcam (ENSACLG00000016376) #21 ENSACLG00000016402 epcam (ENSACLG00000016452) #21 ENSACLG00000016464 ENSACLG00000016501 ENSACLG00000016525 calm2a (ENSACLG00000016554) #22 si:ch211-93n23.7 (ENSACLG00000016569) TTC7A (ENSACLG00000016632) #24 mcfd2 (ENSACLG00000016947) #25 ENSACLG00000016952 socs5b (ENSACLG00000016971) rhoq (ENSACLG00000016986) #29 ENSACLG00000017012 ENSACLG00000017026 ENSACLG00000017033 STK32C (ENSACLG00000017108) ENSACLG00000017200 LRRC27 (ENSACLG00000017210) PWWP2B (ENSACLG00000017264) INPP5A (ENSACLG00000017291) nkx6.2 (ENSACLG00000017440) P. nyererei MODERN SPECIES 357 ENSPNYG00000006864 SANBR (ENSPNYG00000006825) pex13 (ENSPNYG00000006810) rel (ENSPNYG00000006794) papolg (ENSPNYG00000006729) haao (ENSPNYG00000006682) ENSPNYG00000006661 ENSPNYG00000006643 ENSPNYG00000006628 ENSPNYG00000006552 PLEKHH2 (ENSPNYG00000006410) epcam (ENSPNYG00000006385) #21 ENSPNYG00000006368 ENSPNYG00000006335 ENSPNYG00000006295 calm2a (ENSPNYG00000006272) #22 si:ch211-93n23.7 (ENSPNYG00000006257) TTC7A (ENSPNYG00000006096) #24 mcfd2 (ENSPNYG00000006022) #25 ENSPNYG00000006008 socs5b (ENSPNYG00000005996) rhoq (ENSPNYG00000005981) #29 ENSPNYG00000005967 ENSPNYG00000005941 STK32C (ENSPNYG00000005894) PWWP2B (ENSPNYG00000005877) INPP5A (ENSPNYG00000005824) nkx6.2 (ENSPNYG00000005795) valopa (ENSPNYG00000005773) ENSPNYG00000005725 ENSPNYG00000005676 Burton s mouthbrooder MODERN SPECIES 481 zfp36l2 (ENSHBUG00000007929) ENSHBUG00000008046 PLEKHH2 (ENSHBUG00000008309) epcam (ENSHBUG00000008343) #21 ENSHBUG00000008352 ENSHBUG00000008393 calm2a (ENSHBUG00000008419) #22 si:ch211-93n23.7 (ENSHBUG00000000209) TTC7A (ENSHBUG00000008456) #24 mcfd2 (ENSHBUG00000008473) #25 ENSHBUG00000008480 socs5b (ENSHBUG00000008489) rhoq (ENSHBUG00000008514) #29 ENSHBUG00000008528 ENSHBUG00000008541 ENSHBUG00000008604 STK32C (ENSHBUG00000008646) ENSHBUG00000008653 PWWP2B (ENSHBUG00000000215) INPP5A (ENSHBUG00000008724) nkx6.2 (ENSHBUG00000008756) valopa (ENSHBUG00000008799) Lyretail cichlid MODERN SPECIES 349 zfp36l2 (ENSNBRG00000019818) THADA (ENSNBRG00000019636) PLEKHH2 (ENSNBRG00000019540) epcam (ENSNBRG00000019519) #21 epcam (ENSNBRG00000019510) #21 ENSNBRG00000019500 ENSNBRG00000019484 ENSNBRG00000019453 calm2a (ENSNBRG00000019426) #22 si:ch211-93n23.7 (ENSNBRG00000019404) TTC7A (ENSNBRG00000019362) #24 mcfd2 (ENSNBRG00000019344) #25 ENSNBRG00000019331 socs5b (ENSNBRG00000019321) rhoq (ENSNBRG00000019299) #29 ENSNBRG00000019284 ENSNBRG00000019266 ENSNBRG00000019239 STK32C (ENSNBRG00000019203) PWWP2B (ENSNBRG00000019188) INPP5A (ENSNBRG00000019130) nkx6.2 (ENSNBRG00000019104) valopa (ENSNBRG00000018880) ENSNBRG00000018710 Nile tilapia MODERN SPECIES 4 ENSONIG00000027301 ENSONIG00000043103 pex13 (ENSONIG00000002982) rel (ENSONIG00000002983) papolg (ENSONIG00000002985) haao (ENSONIG00000002993) ENSONIG00000028207 OXER1 (ENSONIG00000002995) zfp36l2 (ENSONIG00000042955) ENSONIG00000002998 PLEKHH2 (ENSONIG00000003014) epcam (ENSONIG00000003020) #21 ENSONIG00000037284 ENSONIG00000028673 ENSONIG00000042282 calm2a (ENSONIG00000029039) #22 si:ch211-93n23.7 (ENSONIG00000031678) TTC7A (ENSONIG00000003037) #24 mcfd2 (ENSONIG00000003041) #25 ENSONIG00000003043 socs5b (ENSONIG00000020613) ENSONIG00000030620 ENSONIG00000036965 ENSONIG00000042326 rhoq (ENSONIG00000003044) #29 ENSONIG00000032248 ENSONIG00000032600 ENSONIG00000037366 ENSONIG00000036340 ENSONIG00000039859 ENSONIG00000042662 Midas cichlid MODERN SPECIES 989 haao (ENSACIG00000014235) ENSACIG00000014266 OXER1 (ENSACIG00000014271) zfp36l2 (ENSACIG00000014285) ENSACIG00000014297 PLEKHH2 (ENSACIG00000014357) epcam (ENSACIG00000014407) #21 ENSACIG00000014424 ENSACIG00000014437 calm2a (ENSACIG00000014472) #22 si:ch211-93n23.7 (ENSACIG00000015301) TTC7A (ENSACIG00000015319) #24 mcfd2 (ENSACIG00000015394) #25 ENSACIG00000015406 rhoq (ENSACIG00000015449) #29 ENSACIG00000015464 tmem254 (ENSACIG00000015480) ENSACIG00000015519 ENSACIG00000015553 STK32C (ENSACIG00000015592) PWWP2B (ENSACIG00000015619) INPP5A (ENSACIG00000015636) nkx6.2 (ENSACIG00000015666) valopa (ENSACIG00000015704) ENSACIG00000015959 Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Oryzias ANCESTRAL SPECIES 6 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.b ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00940000153691.a.a ENSGT00940000156851.d ENSGT00390000001859.f ENSGT00940000161503.b ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00390000004153.d ENSGT00940000162528 Oryzias_b ANCESTRAL SPECIES 7 ENSGT00390000008178 ENSGT00940000168731 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e.c ENSGT00990000203619.A.b.b.b.a.e.d ENSGT00940000155076.b.b ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.b ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00940000153691.a.a ENSGT00940000156851.d ENSGT00390000001859.f ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00390000004153.d ENSGT00940000162528 Javanese ricefish MODERN SPECIES 6 cdh11 (ENSOJAG00000014298) cxcl12a (ENSOJAG00000014227) thada (ENSOJAG00000014217) PLEKHH2 (ENSOJAG00000014052) epcam (ENSOJAG00000014018) #21 ENSOJAG00000013983 ENSOJAG00000013967 ENSOJAG00000013953 calm2a (ENSOJAG00000013819) #22 TTC7A (ENSOJAG00000013805) #24 mcfd2 (ENSOJAG00000013798) #25 ENSOJAG00000013794 socs5b (ENSOJAG00000013787) ENSOJAG00000013778 ENSOJAG00000013764 ENSOJAG00000013762 rhoq (ENSOJAG00000013739) #29 ENSOJAG00000013707 ENSOJAG00000013674 crls1 (ENSOJAG00000013667) MCM8 (ENSOJAG00000013123) ENSOJAG00000013114 ENSOJAG00000013099 csgalnact2 (ENSOJAG00000013086) Indian medaka MODERN SPECIES 27 smap1 (ENSOMEG00000001198) b3gat2 (ENSOMEG00000001201) OGFRL1 (ENSOMEG00000001203) asrgl1 (ENSOMEG00000001207) asrgl1 (ENSOMEG00000001214) RIMS1 (ENSOMEG00000001229) ENSOMEG00000001243 fancl (ENSOMEG00000001252) ENSOMEG00000001259 ENSOMEG00000001264 ENSOMEG00000001271 PLEKHH2 (ENSOMEG00000001287) epcam (ENSOMEG00000001295) #21 ENSOMEG00000001298 ENSOMEG00000001300 calm2a (ENSOMEG00000001304) #22 TTC7A (ENSOMEG00000001309) #24 mcfd2 (ENSOMEG00000001314) #25 ENSOMEG00000001316 ENSOMEG00000001318 socs5b (ENSOMEG00000001322) ENSOMEG00000001323 ENSOMEG00000001344 ENSOMEG00000001358 ENSOMEG00000001371 ENSOMEG00000000008 INA (ENSOMEG00000001378) pcgf6 (ENSOMEG00000001379) XPO1 (ENSOMEG00000001384) SANBR (ENSOMEG00000001393) ENSOMEG00000001395 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e.f ENSGT00990000203619.A.b.b.b.a.e.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00940000153691.a.a ENSGT00940000156851.d ENSGT00390000001859.f ENSGT00940000161503.b ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00390000004153.d ENSGT00940000162528 Chinese medaka MODERN SPECIES 529 ENSOSIG00000008520 ENSOSIG00000008500 calm2a (ENSOSIG00000008427) #22 ENSOSIG00000008421 #24 Japanese Medaka HdrR MODERN SPECIES 6 SANBR (ENSORLG00000001625) pex13 (ENSORLG00000001597) REL (ENSORLG00000001586) papolg (ENSORLG00000001577) haao (ENSORLG00000023483) ENSORLG00000001535 ENSORLG00000023646 ENSORLG00000001530 zfp36l2 (ENSORLG00000022580) thada (ENSORLG00000001515) PLEKHH2 (ENSORLG00000001497) ENSORLG00000001469 epcam (ENSORLG00000019684) #21 ENSORLG00000024025 ENSORLG00000028809 calm2a (ENSORLG00000027222) #22 TTC7A (ENSORLG00000001444) #24 mcfd2 (ENSORLG00000028193) #25 ENSORLG00000001430 socs5b (ENSORLG00000001426) rhoq (ENSORLG00000001422) #29 crls1 (ENSORLG00000001420) MCM8 (ENSORLG00000001413) ENSORLG00000027624 ENSORLG00000023263 ENSORLG00000028548 ENSORLG00000027598 cdh11 (ENSORLG00000025117) CHRNA1 (ENSORLG00000001379) ENSORLG00000001366 ENSORLG00000001349 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Aplocheiloidei ANCESTRAL SPECIES 138 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000168731 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00730000110943.B.c ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 Mangrove rivulus MODERN SPECIES 1110 calm2a (ENSKMAG00000001450) #22 Turquoise killifish MODERN SPECIES 1612 PCGF6 (ENSNFUG00015000970) XPO1B (ENSNFUG00015000944) SANBR (ENSNFUG00015000927) PEX13 (ENSNFUG00015000916) REL (ENSNFUG00015000908) PAPOLG (ENSNFUG00015000717) HAAO (ENSNFUG00015000503) ENSNFUG00015000491 ENSNFUG00015000483 ZFP36L2 (ENSNFUG00015000478) ENSNFUG00015000472 ENSNFUG00015000385 PLEKHH2 (ENSNFUG00015000328) ENSNFUG00015000316 ENSNFUG00015000303 calm2a (ENSNFUG00015000255) #22 ENSNFUG00015000225 ENSNFUG00015000216 TTC7A (ENSNFUG00015000187) #24 mcfd2 (ENSNFUG00015025296) #25 ENSNFUG00015025295 FIGNL1 (ENSNFUG00015025294) ikzf1 (ENSNFUG00015025292) ENSNFUG00015025291 Nfu_g_1_007869 (ENSNFUG00015025289) MOCOS (ENSNFUG00015025283) si:ch211-117n7.7 (ENSNFUG00015025280) tm9sf3 (ENSNFUG00015025274) prdx3 (ENSNFUG00015025252) sfxn4 (ENSNFUG00015025247) EIF3S10 (ENSNFUG00015025241) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.b ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00940000168731 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 NAME_6 ANCESTRAL SPECIES 203 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Amazon molly MODERN SPECIES 680 zfp36l2 (ENSPFOG00000019857) zfp36l2 (ENSPFOG00000019858) ENSPFOG00000023731 THADA (ENSPFOG00000019859) PLEKHH2 (ENSPFOG00000019860) ENSPFOG00000019861 calm2a (ENSPFOG00000019862) #22 TTC7A (ENSPFOG00000019863) #24 mcfd2 (ENSPFOG00000019864) #25 ENSPFOG00000019865 socs5b (ENSPFOG00000019960) rhoq (ENSPFOG00000019866) #29 Sailfin molly MODERN SPECIES 1068 calm2a (ENSPLAG00000019589) #22 TTC7A (ENSPLAG00000019564) #24 mcfd2 (ENSPLAG00000019216) #25 ENSPLAG00000019202 socs5b (ENSPLAG00000019191) rhoq (ENSPLAG00000019188) #29 Guppy MODERN SPECIES 445 pcgf6 (ENSPREG00000010092) ENSPREG00000010104 XPO1 (ENSPREG00000010135) SANBR (ENSPREG00000010270) ENSPREG00000010340 papolg (ENSPREG00000010358) haao (ENSPREG00000010380) ENSPREG00000010420 ENSPREG00000010440 zfp36l2 (ENSPREG00000010467) ENSPREG00000010477 PLEKHH2 (ENSPREG00000010530) epcam (ENSPREG00000010615) #21 ENSPREG00000010634 ENSPREG00000010681 calm2a (ENSPREG00000010724) #22 TTC7A (ENSPREG00000010741) #24 ENSPREG00000010761 #24 mcfd2 (ENSPREG00000010773) #25 ENSPREG00000010783 socs5b (ENSPREG00000010792) rhoq (ENSPREG00000010809) #29 ENSPREG00000010831 tmem254 (ENSPREG00000010846) ENSPREG00000010867 STK32C (ENSPREG00000010915) ENSPREG00000010951 PWWP2B (ENSPREG00000010970) nkx6.2 (ENSPREG00000010999) valopa (ENSPREG00000011010) ENSPREG00000011030 Platyfish MODERN SPECIES 14 ENSXMAG00000007352 XPO1 (ENSXMAG00000007353) SANBR (ENSXMAG00000007370) pex13 (ENSXMAG00000007376) REL (ENSXMAG00000007379) papolg (ENSXMAG00000007383) haao (ENSXMAG00000024497) ENSXMAG00000019826 ENSXMAG00000021797 ENSXMAG00000023008 zfp36l2 (ENSXMAG00000024222) ENSXMAG00000007422 PLEKHH2 (ENSXMAG00000007431) epcam (ENSXMAG00000007455) #21 ENSXMAG00000007473 calm2a (ENSXMAG00000007477) #22 TTC7A (ENSXMAG00000007479) #24 mcfd2 (ENSXMAG00000007510) #25 ENSXMAG00000007514 socs5b (ENSXMAG00000019827) rhoq (ENSXMAG00000007515) #29 mxtx1 (ENSXMAG00000007518) ENSXMAG00000007521 ENSXMAG00000007525 STK32C (ENSXMAG00000007528) ENSXMAG00000028891 PWWP2B (ENSXMAG00000007540) INPP5A (ENSXMAG00000007542) nkx6.2 (ENSXMAG00000007554) valopa (ENSXMAG00000029737) ENSXMAG00000007566 NAME_4 ANCESTRAL SPECIES 58 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.b ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Sheepshead minnow MODERN SPECIES 202 btr12 (ENSCVAG00000020057) ENSCVAG00000020084 ENSCVAG00000020088 mad2l1bp (ENSCVAG00000020096) ENSCVAG00000020103 flrt3 (ENSCVAG00000020111) ENSCVAG00000020129 ENSCVAG00000020132 ENSCVAG00000020256 ENSCVAG00000020278 PLEKHH2 (ENSCVAG00000020482) epcam (ENSCVAG00000020618) #21 ENSCVAG00000020639 ENSCVAG00000020657 ENSCVAG00000020692 calm2a (ENSCVAG00000020712) #22 Mummichog MODERN SPECIES 2195 zfp36l2 (ENSFHEG00000020530) ENSFHEG00000020544 PLEKHH2 (ENSFHEG00000020562) epcam (ENSFHEG00000020573) #21 ENSFHEG00000020593 ENSFHEG00000020612 ENSFHEG00000020652 calm2a (ENSFHEG00000020657) #22 TTC7A (ENSFHEG00000020687) #24 mcfd2 (ENSFHEG00000020700) #25 ENSFHEG00000020714 socs5b (ENSFHEG00000020721) rhoq (ENSFHEG00000020742) #29 mxtx1 (ENSFHEG00000020765) ENSFHEG00000020772 ENSFHEG00000020811 STK32C (ENSFHEG00000020845) ENSFHEG00000020866 PWWP2B (ENSFHEG00000020873) INPP5A (ENSFHEG00000000519) nkx6.2 (ENSFHEG00000020909) valopa (ENSFHEG00000020929) ENSFHEG00000020944 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Carangaria ANCESTRAL SPECIES 19 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Pleuronectoidei ANCESTRAL SPECIES 28 ENSGT00940000158034 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b ENSGT00570000079216 Tongue sole MODERN SPECIES 3 PNPT1 (ENSCSEG00000000809) ENSCSEG00000000795 ENSCSEG00000000786 papolg (ENSCSEG00000000771) ENSCSEG00000000765 haao (ENSCSEG00000000752) ENSCSEG00000000746 zfp36l2 (ENSCSEG00000000741) ENSCSEG00000000734 THADA (ENSCSEG00000000718) epcam (ENSCSEG00000000708) #21 PLEKHH2 (ENSCSEG00000000676) ENSCSEG00000000663 ENSCSEG00000000657 ENSCSEG00000000644 calm2a (ENSCSEG00000000634) #22 si:ch211-93n23.7 (ENSCSEG00000000630) TTC7A (ENSCSEG00000000610) #24 mcfd2 (ENSCSEG00000000605) #25 ENSCSEG00000000604 ENSCSEG00000000598 ENSCSEG00000000595 c1d (ENSCSEG00000000587) dnaaf10 (ENSCSEG00000000577) pno1 (ENSCSEG00000000565) ppp3r1a (ENSCSEG00000000556) slc17a5 (ENSCSEG00000000550) eef1a1b (ENSCSEG00000000544) ddx43 (ENSCSEG00000000532) KCNQ5 (ENSCSEG00000000525) cnrip1b (ENSCSEG00000000521) Carangaria_A ANCESTRAL SPECIES 31 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Seriola ANCESTRAL SPECIES 14 ENSGT00990000206006 ENSGT00950000182815.a.a.a.b ENSGT00950000182898.a.a.b ENSGT00940000156695 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.b ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Yellowtail amberjack MODERN SPECIES 3109 ENSSLDG00000001441 unc5b (ENSSLDG00000001368) SLC29A3 (ENSSLDG00000001347) psap (ENSSLDG00000001321) papolg (ENSSLDG00000001217) haao (ENSSLDG00000001168) ENSSLDG00000001155 ENSSLDG00000001132 zfp36l2 (ENSSLDG00000001126) ENSSLDG00000001002 PLEKHH2 (ENSSLDG00000000912) epcam (ENSSLDG00000000893) #21 ENSSLDG00000000853 ENSSLDG00000000841 ENSSLDG00000000780 calm2a (ENSSLDG00000000758) #22 si:ch211-93n23.7 (ENSSLDG00000000731) TTC7A (ENSSLDG00000000654) #24 mcfd2 (ENSSLDG00000000632) #25 ENSSLDG00000000608 socs5b (ENSSLDG00000000598) ENSSLDG00000000354 rhoq (ENSSLDG00000000306) #29 mxtx1 (ENSSLDG00000000243) ENSSLDG00000000212 ENSSLDG00000000123 STK32C (ENSSLDG00000021935) ENSSLDG00000021920 PWWP2B (ENSSLDG00000021915) INPP5A (ENSSLDG00000021836) nkx6.2 (ENSSLDG00000021824) Greater amberjack MODERN SPECIES 30 ENSSDUG00000001211 unc5b (ENSSDUG00000001118) SLC29A3 (ENSSDUG00000001095) psap (ENSSDUG00000001086) papolg (ENSSDUG00000000912) haao (ENSSDUG00000000840) ENSSDUG00000000806 OXER1 (ENSSDUG00000000795) zfp36l2 (ENSSDUG00000000788) ENSSDUG00000000662 PLEKHH2 (ENSSDUG00000000518) epcam (ENSSDUG00000000478) #21 ENSSDUG00000000466 ENSSDUG00000000454 ENSSDUG00000000403 calm2a (ENSSDUG00000000373) #22 ENSSDUG00000000341 TTC7A (ENSSDUG00000000264) #24 mcfd2 (ENSSDUG00000000233) #25 ENSSDUG00000000218 socs5b (ENSSDUG00000000213) ENSSDUG00000000164 rhoq (ENSSDUG00000000093) #29 mxtx1 (ENSSDUG00000020571) ENSSDUG00000020551 ENSSDUG00000020529 STK32C (ENSSDUG00000020492) ENSSDUG00000020451 PWWP2B (ENSSDUG00000020437) INPP5A (ENSSDUG00000020408) nkx6.2 (ENSSDUG00000020400) Barramundi perch MODERN SPECIES 456 ENSLCAG00010002806 ENSLCAG00010002803 ENSLCAG00010002802 calm2a (ENSLCAG00010002801) #22 si:ch211-93n23.7 (ENSLCAG00010002799) TTC7A (ENSLCAG00010002796) #24 shld2 (ENSLCAG00010002793) glud1a (ENSLCAG00010002770) ENSLCAG00010002763 ENSLCAG00010002759 rps27a (ENSLCAG00010002756) bmpr1aa (ENSLCAG00010002684) ldb3a (ENSLCAG00010002675) ENSLCAG00010002673 Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Zig-zag eel MODERN SPECIES 6 ENSMAMG00000010542 XPO1 (ENSMAMG00000010568) SANBR (ENSMAMG00000010631) PEX13 (ENSMAMG00000010646) REL (ENSMAMG00000010658) PAPOLG (ENSMAMG00000010667) HAAO (ENSMAMG00000025680) ENSMAMG00000010776 ENSMAMG00000010788 ZFP36L2 (ENSMAMG00000024578) ENSMAMG00000010805 PLEKHH2 (ENSMAMG00000010890) epcam (ENSMAMG00000010904) #21 ENSMAMG00000010929 ENSMAMG00000028117 calm2a (ENSMAMG00000010998) #22 si:ch211-93n23.7 (ENSMAMG00000011013) TTC7A (ENSMAMG00000011025) #24 mcfd2 (ENSMAMG00000011042) #25 ENSMAMG00000011055 socs5b (ENSMAMG00000011056) ENSMAMG00000027941 #29 ENSMAMG00000011075 ENSMAMG00000011092 ENSMAMG00000011112 STK32C (ENSMAMG00000011136) ENSMAMG00000011167 PWWP2B (ENSMAMG00000011185) INPP5A (ENSMAMG00000011199) nkx6.2 (ENSMAMG00000026922) ENSMAMG00000011294 Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Climbing perch MODERN SPECIES 6 ENSATEG00000029313 XPO1 (ENSATEG00000008816) SANBR (ENSATEG00000008937) PEX13 (ENSATEG00000008975) REL (ENSATEG00000008984) PAPOLG (ENSATEG00000009007) ENSATEG00000009086 ENSATEG00000009093 ENSATEG00000009101 ZFP36L2 (ENSATEG00000009119) ENSATEG00000009131 PLEKHH2 (ENSATEG00000009267) epcam (ENSATEG00000009305) #21 ENSATEG00000029611 ENSATEG00000009335 calm2a (ENSATEG00000029989) #22 si:ch211-93n23.7 (ENSATEG00000009420) TTC7A (ENSATEG00000009434) #24 mcfd2 (ENSATEG00000009468) #25 ENSATEG00000009486 socs5b (ENSATEG00000009505) ENSATEG00000009510 #29 ENSATEG00000009520 ENSATEG00000009533 ENSATEG00000009538 ENSATEG00000009581 STK32C (ENSATEG00000009593) ENSATEG00000009604 PWWP2B (ENSATEG00000009620) INPP5A (ENSATEG00000009627) nkx6.2 (ENSATEG00000028200) Siamese fighting fish MODERN SPECIES 6 XPO1 (ENSBSLG00000017320) SANBR (ENSBSLG00000017756) pex13 (ENSBSLG00000017825) REL (ENSBSLG00000017839) papolg (ENSBSLG00000017966) haao (ENSBSLG00000019690) ENSBSLG00000019699 ENSBSLG00000019702 zfp36l2 (ENSBSLG00000019709) ENSBSLG00000019710 PLEKHH2 (ENSBSLG00000019739) epcam (ENSBSLG00000020954) #21 ENSBSLG00000020987 ENSBSLG00000021038 ENSBSLG00000021077 calm2a (ENSBSLG00000021159) #22 TTC7A (ENSBSLG00000021328) #24 mcfd2 (ENSBSLG00000021690) #25 ENSBSLG00000021713 socs5b (ENSBSLG00000021738) rhoq (ENSBSLG00000021750) #29 mxtx1 (ENSBSLG00000021776) ENSBSLG00000021787 ENSBSLG00000021800 STK32C (ENSBSLG00000021835) ENSBSLG00000021937 PWWP2B (ENSBSLG00000021951) INPP5A (ENSBSLG00000021972) nkx6.2 (ENSBSLG00000022009) valopa (ENSBSLG00000022018) ENSBSLG00000022061 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Tetraodontidae ANCESTRAL SPECIES 48 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00990000206002 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Fugu MODERN SPECIES 16 XPO1 (ENSTRUG00000033434) pex13 (ENSTRUG00000028922) ENSTRUG00000023093 REL (ENSTRUG00000029404) ENSTRUG00000006394 papolg (ENSTRUG00000006410) haao (ENSTRUG00000006699) ENSTRUG00000030276 zfp36l2 (ENSTRUG00000032248) ENSTRUG00000007018 PLEKHH2 (ENSTRUG00000007949) ENSTRUG00000031735 epcam (ENSTRUG00000008475) #21 ENSTRUG00000033009 ENSTRUG00000021848 calm2a (ENSTRUG00000008685) #22 ENSTRUG00000024614 ENSTRUG00000023610 TTC7A (ENSTRUG00000008737) #24 mcfd2 (ENSTRUG00000009161) #25 ENSTRUG00000009191 socs5b (ENSTRUG00000022095) rhoq (ENSTRUG00000024700) #29 mxtx1 (ENSTRUG00000009443) ENSTRUG00000029306 ENSTRUG00000009534 STK32C (ENSTRUG00000033196) ENSTRUG00000032270 PWWP2B (ENSTRUG00000009585) INPP5A (ENSTRUG00000009619) nkx6.2 (ENSTRUG00000010013) Tetraodon MODERN SPECIES 26 noc3l (ENSTNIG00000018542) ENSTNIG00000002344 nudt13 (ENSTNIG00000018541) rpp30 (ENSTNIG00000018540) SANBR (ENSTNIG00000017109) ENSTNIG00000017108 ENSTNIG00000017107 papolg (ENSTNIG00000017106) ENSTNIG00000017105 haao (ENSTNIG00000017104) zfp36l2 (ENSTNIG00000017103) ENSTNIG00000017102 PLEKHH2 (ENSTNIG00000017101) epcam (ENSTNIG00000017100) #21 ENSTNIG00000017099 calm2a (ENSTNIG00000017098) #22 ENSTNIG00000000458 ENSTNIG00000017097 #24 mcfd2 (ENSTNIG00000017096) #25 ENSTNIG00000017095 socs5b (ENSTNIG00000017094) rhoq (ENSTNIG00000017093) #29 mxtx1 (ENSTNIG00000017092) tmem254 (ENSTNIG00000017091) ENSTNIG00000017090 STK32C (ENSTNIG00000017089) ENSTNIG00000000261 PWWP2B (ENSTNIG00000017088) INPP5A (ENSTNIG00000017087) nkx6.2 (ENSTNIG00000017086) valopa (ENSTNIG00000017085) Eupecaria_A ANCESTRAL SPECIES 26 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Ballan wrasse MODERN SPECIES 161 ENSLBEG00000010699 ENSLBEG00000010559 epcam (ENSLBEG00000010499) #21 ENSLBEG00000010464 ENSLBEG00000010443 ENSLBEG00000010387 calm2a (ENSLBEG00000010332) #22 si:ch211-93n23.7 (ENSLBEG00000010293) TTC7A (ENSLBEG00000009868) #24 mcfd2 (ENSLBEG00000009660) #25 PROP1 (ENSLBEG00000009650) socs5b (ENSLBEG00000009632) rhoq (ENSLBEG00000009597) #29 mxtx1 (ENSLBEG00000009575) tmem254 (ENSLBEG00000009547) ENSLBEG00000009458 STK32C (ENSLBEG00000009387) ENSLBEG00000009354 ENSLBEG00000009335 PWWP2B (ENSLBEG00000009309) INPP5A (ENSLBEG00000009250) nkx6.2 (ENSLBEG00000009205) Eupecaria_B ANCESTRAL SPECIES 26 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Eupecaria_C ANCESTRAL SPECIES 28 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Gilthead seabream MODERN SPECIES 6 ENSSAUG00010011613 XPO1 (ENSSAUG00010011605) SANBR (ENSSAUG00010011590) pex13 (ENSSAUG00010011589) REL (ENSSAUG00010011587) papolg (ENSSAUG00010009887) haao (ENSSAUG00010009852) ENSSAUG00010009849 OXER1 (ENSSAUG00010009848) zfp36l2 (ENSSAUG00010009846) ENSSAUG00010009782 PLEKHH2 (ENSSAUG00010009733) epcam (ENSSAUG00010009722) #21 ENSSAUG00010009721 ENSSAUG00010009720 calm2a (ENSSAUG00010009603) #22 si:ch211-93n23.7 (ENSSAUG00010009602) TTC7A (ENSSAUG00010009599) #24 mcfd2 (ENSSAUG00010009594) #25 ENSSAUG00010009593 socs5b (ENSSAUG00010009591) ENSSAUG00010009589 rhoq (ENSSAUG00010009587) #29 mxtx1 (ENSSAUG00010009584) ENSSAUG00010009582 ENSSAUG00010009574 STK32C (ENSSAUG00010008986) LRRC27 (ENSSAUG00010008974) PWWP2B (ENSSAUG00010008973) INPP5A (ENSSAUG00010008928) nkx6.2 (ENSSAUG00010008921) Eupercaria_incertae_sedis ANCESTRAL SPECIES 32 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000162292 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00940000170679 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 Large yellow croaker MODERN SPECIES 2 pex13 (ENSLCRG00005005699) rel (ENSLCRG00005005704) papolg (ENSLCRG00005005738) haao (ENSLCRG00005008315) ENSLCRG00005008319 ENSLCRG00005008321 ENSLCRG00005008322 ENSLCRG00005008323 zfp36l2 (ENSLCRG00005008324) ENSLCRG00005008327 PLEKHH2 (ENSLCRG00005008334) epcam (ENSLCRG00005008381) #21 ENSLCRG00005008382 ENSLCRG00005008397 ENSLCRG00005008400 calm2a (ENSLCRG00005008402) #22 si:ch211-93n23.7 (ENSLCRG00005008445) TTC7A (ENSLCRG00005008446) #24 ENSLCRG00005008452 mcfd2 (ENSLCRG00005008454) #25 ENSLCRG00005008455 socs5b (ENSLCRG00005008456) ENSLCRG00005008457 rhoq (ENSLCRG00005008460) #29 mxtx1 (ENSLCRG00005008465) tmem254 (ENSLCRG00005008467) ENSLCRG00005008469 STK32C (ENSLCRG00005008477) ENSLCRG00005008493 PWWP2B (ENSLCRG00005008494) INPP5A (ENSLCRG00005008504) European seabass MODERN SPECIES 1 ENSDLAG00005033033 ENSDLAG00005032321 ENSDLAG00005024422 ENSDLAG00005029755 ENSDLAG00005017977 ENSDLAG00005008639 ENSDLAG00005002290 ENSDLAG00005028446 ENSDLAG00005027761 ENSDLAG00005008627 ENSDLAG00005008674 epcam (ENSDLAG00005009348) #21 ENSDLAG00005009353 ENSDLAG00005009358 ENSDLAG00005009361 calm2a (ENSDLAG00005029492) #22 si:ch211-93n23.7 (ENSDLAG00005029780) TTC7A (ENSDLAG00005009409) #24 mcfd2 (ENSDLAG00005026903) #25 ENSDLAG00005009428 socs5b (ENSDLAG00005032498) ENSDLAG00005009438 ENSDLAG00005009441 #29 ENSDLAG00005009445 ENSDLAG00005009450 ENSDLAG00005009455 STK32C (ENSDLAG00005009501) ENSDLAG00005010271 PWWP2B (ENSDLAG00005010295) INPP5A (ENSDLAG00005029925) nkx6.2 (ENSDLAG00005010508) Perciformes ANCESTRAL SPECIES 17 ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00990000206002 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Cottioidei ANCESTRAL SPECIES 68 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 Stickleback MODERN SPECIES 6 pcgf6 (ENSGACG00000002779) XPO1 (ENSGACG00000002743) SANBR (ENSGACG00000002736) pex13 (ENSGACG00000002732) ENSGACG00000002730 papolg (ENSGACG00000002718) haao (ENSGACG00000002666) ENSGACG00000002665 ENSGACG00000002656 ENSGACG00000002649 epcam (ENSGACG00000002632) #21 NOP16 (ENSGACG00000002618) ENSGACG00000002617 ENSGACG00000002616 ENSGACG00000002612 calm2a (ENSGACG00000002605) #22 TTC7A (ENSGACG00000002595) #24 mcfd2 (ENSGACG00000002589) #25 ENSGACG00000002588 PROP1 (ENSGACG00000002587) socs5b (ENSGACG00000002585) rhoq (ENSGACG00000002584) #29 nt5c2a (ENSGACG00000002577) borcs7 (ENSGACG00000002571) cyp17a1 (ENSGACG00000002550) RNF166 (ENSGACG00000002547) ctu2 (ENSGACG00000002530) cdk1 (ENSGACG00000002518) ENSGACG00000002507 galm (ENSGACG00000002489) ENSGACG00000002483 Lumpfish MODERN SPECIES 6 pcgf6 (ENSCLMG00005022564) ENSCLMG00005022562 XPO1 (ENSCLMG00005022555) ENSCLMG00005022546 pex13 (ENSCLMG00005022545) ENSCLMG00005022542 papolg (ENSCLMG00005022200) haao (ENSCLMG00005022184) ENSCLMG00005022183 zfp36l2 (ENSCLMG00005022182) ENSCLMG00005022178 PLEKHH2 (ENSCLMG00005022166) epcam (ENSCLMG00005022164) #21 ENSCLMG00005022158 ENSCLMG00005022157 calm2a (ENSCLMG00005022156) #22 TTC7A (ENSCLMG00005022155) #24 ENSCLMG00005022154 #24 mcfd2 (ENSCLMG00005022153) #25 ENSCLMG00005022151 socs5b (ENSCLMG00005022150) rhoq (ENSCLMG00005022149) #29 mxtx1 (ENSCLMG00005022148) ENSCLMG00005022147 ENSCLMG00005022146 ide (ENSCLMG00005022139) kmo (ENSCLMG00005022133) opn3 (ENSCLMG00005022132) cdc42ep3 (ENSCLMG00005022131) ENSCLMG00005022129 cyp1b1 (ENSCLMG00005022128) Perciformes_a ANCESTRAL SPECIES 40 ENSGT00940000166025.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b #22 ENSGT00990000206002 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 #29 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b Pike perch MODERN SPECIES 62 XPO1 (ENSSLUG00000003545) SANBR (ENSSLUG00000003658) pex13 (ENSSLUG00000003700) REL (ENSSLUG00000003714) papolg (ENSSLUG00000003953) haao (ENSSLUG00000006811) ENSSLUG00000006825 OXER1 (ENSSLUG00000006836) OXER1 (ENSSLUG00000006838) zfp36l2 (ENSSLUG00000006843) ENSSLUG00000006857 PLEKHH2 (ENSSLUG00000006893) epcam (ENSSLUG00000006926) #21 ENSSLUG00000006941 ENSSLUG00000006952 calm2a (ENSSLUG00000006958) #22 ENSSLUG00000006966 TTC7A (ENSSLUG00000006976) #24 mcfd2 (ENSSLUG00000007002) #25 ENSSLUG00000007008 socs5b (ENSSLUG00000007028) rhoq (ENSSLUG00000007036) #29 mxtx1 (ENSSLUG00000007046) ENSSLUG00000007058 ENSSLUG00000007070 STK32C (ENSSLUG00000007119) ENSSLUG00000007193 PWWP2B (ENSSLUG00000007199) INPP5A (ENSSLUG00000007233) nkx6.2 (ENSSLUG00000007911) valopa (ENSSLUG00000007918) Channel bull blenny MODERN SPECIES 6 inaa (ENSCGOG00000005000) pcgf6 (ENSCGOG00000004987) ENSCGOG00000004984 XPO1 (ENSCGOG00000004030) SANBR (ENSCGOG00000003891) pex13 (ENSCGOG00000003867) papolg (ENSCGOG00000001797) haao (ENSCGOG00000001630) ENSCGOG00000001611 zfp36l2 (ENSCGOG00000001594) ENSCGOG00000009930 PLEKHH2 (ENSCGOG00000009672) epcam (ENSCGOG00000009655) #21 ENSCGOG00000009653 ENSCGOG00000009609 calm2a (ENSCGOG00000009161) #22 TTC7A (ENSCGOG00000009140) #24 mcfd2 (ENSCGOG00000009135) #25 ENSCGOG00000009126 socs5b (ENSCGOG00000009122) ENSCGOG00000009112 rhoq (ENSCGOG00000009097) #29 mxtx1 (ENSCGOG00000009094) ENSCGOG00000009091 ENSCGOG00000009085 STK32C (ENSCGOG00000008934) ENSCGOG00000008926 PWWP2B (ENSCGOG00000008924) INPP5A (ENSCGOG00000008304) nkx6.2 (ENSCGOG00000008283) valopa (ENSCGOG00000008270) Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 32 ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.b ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000154573 ENSGT00940000165409.e.a ENSGT00940000164251.c ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00940000155970 #29 ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a Otophysi ANCESTRAL SPECIES ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000164251.c ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 Characiphysae ANCESTRAL SPECIES 92 ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00940000164218.pb ENSGT00940000165409.e.a ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 Channel catfish MODERN SPECIES 22 PKDCC (ENSIPUG00000010826) ENSIPUG00000010820 eml4 (ENSIPUG00000010577) ENSIPUG00000010529 COX7R (ENSIPUG00000010503) kcng3 (ENSIPUG00000010483) Hcar2 (ENSIPUG00000010473) ENSIPUG00000010466 haao (ENSIPUG00000010362) ZFP36L2 (ENSIPUG00000010345) thada (ENSIPUG00000010261) PLEKHH2 (ENSIPUG00000010188) epcam (ENSIPUG00000010141) #21 ENSIPUG00000010128 ENSIPUG00000010117 CALM (ENSIPUG00000010073) #22 si:ch211-93n23.7 (ENSIPUG00000010034) ttc7a (ENSIPUG00000010011) #24 mcfd2 (ENSIPUG00000009993) #25 PROP1 (ENSIPUG00000009980) socs5b (ENSIPUG00000009973) KLHL10 (ENSIPUG00000009959) ENSIPUG00000009953 PRKCE (ENSIPUG00000009870) #32 epas1b (ENSIPUG00000009778) srbd1 (ENSIPUG00000009661) #33 six2 (ENSIPUG00000009646) #34 six3 (ENSIPUG00000009635) #35 camkmt (ENSIPUG00000009592) #36 prepl (ENSIPUG00000009542) #37 slc3a1 (ENSIPUG00000009475) Characiphysae_b ANCESTRAL SPECIES 91 ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00940000164218.pb ENSGT00940000165409.e.a ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 Characoidei ANCESTRAL SPECIES 85 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a ENSGT00940000164251.c ENSGT00940000167711.a.b ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a.a #32 ENSGT00940000155930.g.a ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 Mexicana tetra MODERN SPECIES 17 prepl (ENSAMXG00000004270) #37 ENSAMXG00000039583 #36 ENSAMXG00000040625 CAMKMT (ENSAMXG00000038785) #36 ENSAMXG00000040317 six3a (ENSAMXG00000004283) #35 six2a (ENSAMXG00000037922) #34 SRBD1 (ENSAMXG00000004294) #33 epas1b (ENSAMXG00000004315) PRKCE (ENSAMXG00000004336) #32 thada (ENSAMXG00000037128) PLEKHH2 (ENSAMXG00000004464) epcam (ENSAMXG00000031147) #21 ENSAMXG00000043432 ENSAMXG00000004458 calm2a (ENSAMXG00000004452) #22 si:ch211-93n23.7 (ENSAMXG00000036165) TTC7A (ENSAMXG00000004414) #24 mcfd2 (ENSAMXG00000043792) #25 ENSAMXG00000042713 socs5b (ENSAMXG00000025600) ENSAMXG00000043248 #32 ZFP36L2 (ENSAMXG00000043777) ENSAMXG00000035828 haao (ENSAMXG00000038860) ENSAMXG00000042390 OXER1 (ENSAMXG00000026289) OXER1 (ENSAMXG00000026288) OXER1 (ENSAMXG00000026287) OXER1 (ENSAMXG00000015045) KCNG3 (ENSAMXG00000015014) Red-bellied piranha MODERN SPECIES 15 ENSPNAG00000013111 COX7A2L (ENSPNAG00000002563) KCNG3 (ENSPNAG00000004758) ENSPNAG00000002572 OXER1 (ENSPNAG00000002574) OXER1 (ENSPNAG00000013161) ENSPNAG00000002586 haao (ENSPNAG00000002590) ZFP36L2 (ENSPNAG00000013174) THADA (ENSPNAG00000013217) PLEKHH2 (ENSPNAG00000013260) epcam (ENSPNAG00000002669) #21 ENSPNAG00000002683 ENSPNAG00000002696 ENSPNAG00000002711 calm2a (ENSPNAG00000013341) #22 si:ch211-93n23.7 (ENSPNAG00000013347) TTC7A (ENSPNAG00000013367) #24 mcfd2 (ENSPNAG00000013379) #25 ENSPNAG00000013386 PRKCE (ENSPNAG00000002772) #32 epas1b (ENSPNAG00000013479) SRBD1 (ENSPNAG00000013492) #33 six2a (ENSPNAG00000002782) #34 six3a (ENSPNAG00000013510) #35 CAMKMT (ENSPNAG00000002804) #36 SLC3A1 (ENSPNAG00000013555) prepl (ENSPNAG00000002856) #37 ppm1ba (ENSPNAG00000013678) LRPPRC (ENSPNAG00000002895) abcg8 (ENSPNAG00000002918) Electric eel MODERN SPECIES 61 pkdcca (ENSEEEG00000010780) EML4 (ENSEEEG00000010769) ENSEEEG00000010766 KCNG3 (ENSEEEG00000010765) OXER1 (ENSEEEG00000010762) OXER1 (ENSEEEG00000010760) ENSEEEG00000010759 haao (ENSEEEG00000010732) ZFP36L2 (ENSEEEG00000010730) ENSEEEG00000010728 thada (ENSEEEG00000010725) PLEKHH2 (ENSEEEG00000010550) epcam (ENSEEEG00000010538) #21 ENSEEEG00000010537 ENSEEEG00000010536 calm2a (ENSEEEG00000010434) #22 TTC7A (ENSEEEG00000010428) #24 mcfd2 (ENSEEEG00000010425) #25 ENSEEEG00000010423 socs5b (ENSEEEG00000010421) PRKCE (ENSEEEG00000010415) #32 epas1b (ENSEEEG00000010407) ENSEEEG00000010406 #33 ENSEEEG00000010405 Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.a.a.b ENSGT00940000167711.a.a.a ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00940000156883 ENSGT00510000047589 ENSGT00940000155710.a ENSGT00740000116794 ENSGT00740000115593 ENSGT00530000068411 ENSGT00940000167270 ENSGT00940000154865 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 175 ENSGT00390000001205.a.a ENSGT00940000158434.a ENSGT00390000003039.a ENSGT00970000193390.c.b.b.b.a.db ENSGT00940000154815.b.b.g ENSGT00940000159658.b.b.b ENSGT00990000203619.A.b.b.b.a.e.k.c ENSGT00390000010899.a.b.b.a.c ENSGT00940000161584.k.a ENSGT00940000157675.b ENSGT00390000018245.u #21 ENSGT00940000167711.b ENSGT00940000164251.c ENSGT00940000167711.a.a.a ENSGT00730000110943.B.c.a ENSGT00950000182980.a.b.b.b.gc.a #22 ENSGT00940000167263 ENSGT00940000158638.k #24 ENSGT00940000154141.B.db #25 ENSGT00940000165391.a ENSGT00940000164285.a.f.b ENSGT00940000154711.a.a.c #32 ENSGT00940000155930.h Cyprininae_a ANCESTRAL SPECIES 216 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a.t ENSGT00940000157303.e.b ENSGT00390000001205.a.a ENSGT00940000158434.a ENSGT00390000003039.a ENSGT00970000193390.c.b.b.b.a.db ENSGT00940000154815.b.b.g ENSGT00940000159658.b.b.b ENSGT00990000203619.A.b.b.b.a.e.k.c ENSGT00390000010899.a.b.b.a.c ENSGT00390000013008.a ENSGT00940000161584.k.a ENSGT00940000157675.b ENSGT00940000164251.d ENSGT00950000182980.a.b.b.b.gc.a #22 ENSGT00940000167263 ENSGT00940000158638.k #24 ENSGT00940000154141.B.db #25 ENSGT00940000165391.a ENSGT00940000164285.a.f.b ENSGT00940000154711.a.a.c #32 ENSGT00940000155930.g.a.a ENSGT00940000156883.g ENSGT00940000155710.a.k ENSGT00740000115593.b ENSGT00940000167270 ENSGT00940000154865.kc.a ENSGT00940000158120.h ENSGT00940000156925.v.b ENSGT00940000154518.b.i Golden-line barbel MODERN SPECIES 122 UBR2 (ENSSGRG00000054594) prph2b (ENSSGRG00000054666) pkdcca (ENSSGRG00000054667) EML4 (ENSSGRG00000054671) ENSSGRG00000054725 COX7A2L (ENSSGRG00000054726) KCNG3 (ENSSGRG00000054728) OXER1 (ENSSGRG00000054729) ENSSGRG00000054730 haao (ENSSGRG00000054731) ENSSGRG00000054736 PLEKHH2 (ENSSGRG00000054751) epcam (ENSSGRG00000054769) #21 ENSSGRG00000054770 ENSSGRG00000054771 calm2a (ENSSGRG00000054774) #22 TTC7A (ENSSGRG00000054776) #24 mcfd2 (ENSSGRG00000054778) #25 ENSSGRG00000054780 socs5b (ENSSGRG00000054781) ENSSGRG00000001133 #32 ENSSGRG00000001147 #32 Common carp reference MODERN SPECIES 18 ENSCCRG00000021095 ENSCCRG00000060988 KCNG3 (ENSCCRG00000012357) ENSCCRG00000067207 ENSCCRG00000066788 OXER1 (ENSCCRG00000045347) ENSCCRG00000045350 haao (ENSCCRG00000070664) ZFP36L2 (ENSCCRG00000082716) PLEKHH2 (ENSCCRG00000002144) epcam (ENSCCRG00000004454) #21 ENSCCRG00000049720 #21 ENSCCRG00000053551 #21 ENSCCRG00000081416 ENSCCRG00000061863 calm2a (ENSCCRG00000077289) #22 si:ch211-93n23.7 (ENSCCRG00000027992) TTC7A (ENSCCRG00000027985) #24 mcfd2 (ENSCCRG00000063255) #25 ENSCCRG00000082634 socs5b (ENSCCRG00000067878) ENSCCRG00000075770 #32 epas1b (ENSCCRG00000024181) ENSCCRG00000024186 atl2 (ENSCCRG00000060545) hells (ENSCCRG00000027223) ENSCCRG00000056281 ENSCCRG00000073729 macroh2a2 (ENSCCRG00000018156) ENSCCRG00000038554 pitx3 (ENSCCRG00000038544) Goldfish MODERN SPECIES 31 prkn (ENSCARG00000063999) UBR2 (ENSCARG00000061393) prph2b (ENSCARG00000061037) pkdcca (ENSCARG00000061017) ENSCARG00000061005 EML4 (ENSCARG00000060034) ENSCARG00000059866 COX7A2L (ENSCARG00000059836) KCNG3 (ENSCARG00000059822) OXER1 (ENSCARG00000059790) haao (ENSCARG00000059745) ZFP36L2 (ENSCARG00000059714) THADA (ENSCARG00000059494) PLEKHH2 (ENSCARG00000058871) epcam (ENSCARG00000058790) #21 calm2a (ENSCARG00000058664) #22 TTC7A (ENSCARG00000058641) #24 mcfd2 (ENSCARG00000058626) #25 ENSCARG00000058618 socs5b (ENSCARG00000058600) ENSCARG00000058592 PRKCE (ENSCARG00000058387) #32 epas1b (ENSCARG00000056927) galm (ENSCARG00000056791) atl2 (ENSCARG00000052292) ENSCARG00000052052 hells (ENSCARG00000051495) ENSCARG00000051148 macroh2a2 (ENSCARG00000051088) GBF1 (ENSCARG00000050901) pitx3 (ENSCARG00000050860) Cyprininae ANCESTRAL SPECIES 87 ENSGT00950000183075.a.a.a.a.s ENSGT00940000157303.e.a ENSGT00390000001205.a.b ENSGT00940000158434.b ENSGT00390000003039.b ENSGT00940000154815.b.b.h ENSGT00940000159658.b.b.a ENSGT00990000203619.A.b.b.b.a.e.k.d ENSGT00390000013008 ENSGT00940000161584.k.b.a ENSGT00390000015500 ENSGT00940000157675.a ENSGT00390000018245.v #21 ENSGT00940000167711.a.a.b ENSGT00730000110943.B.c.b ENSGT00950000182980.a.b.b.b.gc.b #22 ENSGT00940000158638.l #24 ENSGT00940000154141.B.eb #25 ENSGT00940000165391.b ENSGT00940000164285.a.f.a ENSGT00940000154711.a.a.d #32 ENSGT00940000155930.g.a.b ENSGT00940000156883.h ENSGT00510000047589 ENSGT00940000155710.a.l ENSGT00740000116794 ENSGT00740000115593.a ENSGT00530000068411 ENSGT00940000154865.kc.b ENSGT00940000158120.g ENSGT00940000156925.v.a Goldfish MODERN SPECIES 4 pkdcca (ENSCARG00000006984) EML4 (ENSCARG00000006561) ENSCARG00000006497 ENSCARG00000006488 COX7A2L (ENSCARG00000006474) KCNG3 (ENSCARG00000006467) OXER1 (ENSCARG00000006463) ENSCARG00000006450 haao (ENSCARG00000006199) ZFP36L2 (ENSCARG00000006176) PLEKHH2 (ENSCARG00000005512) epcam (ENSCARG00000005467) #21 epcam (ENSCARG00000005450) #21 ENSCARG00000005418 ENSCARG00000005404 calm2a (ENSCARG00000005388) #22 TTC7A (ENSCARG00000005333) #24 mcfd2 (ENSCARG00000005315) #25 ENSCARG00000005305 socs5b (ENSCARG00000005299) PRKCE (ENSCARG00000004897) #32 ENSCARG00000004854 si:ch211-160d20.3 (ENSCARG00000004845) ENSCARG00000004843 ENSCARG00000004840 pde10a (ENSCARG00000003178) pla2g12b (ENSCARG00000003085) mcu (ENSCARG00000003010) micu1 (ENSCARG00000002821) nolc1 (ENSCARG00000002790) ENSCARG00000002788 Cyprininae_a ANCESTRAL SPECIES 53 ENSGT00950000183075.a.a.a.a.s ENSGT00940000157303.e.a ENSGT00390000001205.a.b ENSGT00940000158434.b ENSGT00390000003039.b ENSGT00940000154815.b.b.h ENSGT00940000159658.b.b.a ENSGT00990000203619.A.b.b.b.a.e.k.d ENSGT00390000013008.b ENSGT00940000161584.k.b.a ENSGT00390000015500 ENSGT00940000157675.a ENSGT00390000018245.v #21 ENSGT00940000167711.a.a.b ENSGT00730000110943.B.c.b ENSGT00950000182980.a.b.b.b.gc.b #22 ENSGT00940000158638.l #24 ENSGT00940000154141.B.eb #25 ENSGT00940000165391.b ENSGT00940000164285.a.f.a ENSGT00940000154711.a.a.d #32 ENSGT00940000155930.g.a.b ENSGT00940000156883.h ENSGT00510000047589 ENSGT00940000155710.a.l ENSGT00740000115593.a ENSGT00530000068411 ENSGT00940000154865.kc.b ENSGT00940000158120.g ENSGT00940000156925.v.a ENSGT00940000154518.b.j Common carp reference MODERN SPECIES 48 COX7A2L (ENSCCRG00000024155) KCNG3 (ENSCCRG00000069780) ENSCCRG00000067672 ENSCCRG00000065973 ENSCCRG00000066862 ENSCCRG00000008335 ENSCCRG00000068043 OXER1 (ENSCCRG00000012757) haao (ENSCCRG00000079458) ZFP36L2 (ENSCCRG00000070791) THADA (ENSCCRG00000047904) PLEKHH2 (ENSCCRG00000076647) epcam (ENSCCRG00000049714) #21 ENSCCRG00000001182 ENSCCRG00000001175 calm2a (ENSCCRG00000080623) #22 TTC7A (ENSCCRG00000021494) #24 mcfd2 (ENSCCRG00000025548) #25 ENSCCRG00000079722 socs5b (ENSCCRG00000055545) ENSCCRG00000067455 #32 epas1b (ENSCCRG00000027310) atl2 (ENSCCRG00000029458) galm (ENSCCRG00000058321) hells (ENSCCRG00000029434) ENSCCRG00000052977 ENSCCRG00000025131 ENSCCRG00000072851 macroh2a2 (ENSCCRG00000027439) ENSCCRG00000027640 pitx3 (ENSCCRG00000047836) Golden-line barbel MODERN SPECIES 81 ENSSGRG00000033741 EML4 (ENSSGRG00000033838) ENSSGRG00000037145 ENSSGRG00000037146 COX7A2L (ENSSGRG00000037149) KCNG3 (ENSSGRG00000037150) OXER1 (ENSSGRG00000037151) ENSSGRG00000037152 haao (ENSSGRG00000037153) ZFP36L2 (ENSSGRG00000037154) THADA (ENSSGRG00000037155) PLEKHH2 (ENSSGRG00000037158) epcam (ENSSGRG00000037167) #21 ENSSGRG00000037169 ENSSGRG00000037171 calm2a (ENSSGRG00000037177) #22 TTC7A (ENSSGRG00000037254) #24 ENSSGRG00000037383 socs5b (ENSSGRG00000037384) PRKCE (ENSSGRG00000037386) #32 epas1b (ENSSGRG00000037412) DHX57 (ENSSGRG00000038587) galm (ENSSGRG00000038589) atl2 (ENSSGRG00000038594) hells (ENSSGRG00000039389) ENSSGRG00000039430 Zebrafish MODERN SPECIES 4 ENSDARG00000111100 HTRA2 (ENSDARG00000092061) pimr151 (ENSDARG00000116869) ENSDARG00000112789 ENSDARG00000092094 ENSDARG00000111017 ENSDARG00000115120 ENSDARG00000112183 OXER1 (ENSDARG00000062874) haao (ENSDARG00000076487) thada (ENSDARG00000053082) PLEKHH2 (ENSDARG00000040851) epcam (ENSDARG00000040534) #21 ENSDARG00000087558 ENSDARG00000087190 calm2a (ENSDARG00000031427) #22 si:ch211-93n23.7 (ENSDARG00000089552) TTC7A (ENSDARG00000074760) #24 mcfd2 (ENSDARG00000039757) #25 prop1 (ENSDARG00000039756) socs5b (ENSDARG00000062745) PRKCE (ENSDARG00000069928) #32 epas1b (ENSDARG00000057671) DHX57 (ENSDARG00000057660) galm (ENSDARG00000057630) atl2 (ENSDARG00000057719) ENSDARG00000075943 hells (ENSDARG00000057738) ENSDARG00000092199 macroh2a2 (ENSDARG00000087897) GBF1 (ENSDARG00000027016) Clupeiformes ANCESTRAL SPECIES 35 ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 #21 ENSGT00940000167711.b ENSGT00940000164251.c ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.gc #22 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a.f ENSGT00940000154711.a.a #32 ENSGT00940000155930.g.a ENSGT00510000047850 #33 ENSGT00940000158292.a.b #34 ENSGT00940000160346.B.f #35 ENSGT00390000002168 #36 ENSGT00530000063426.a #37 ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 Denticle herring MODERN SPECIES 18 rpl32 (ENSDCDG00000003171) ENSDCDG00000003143 ENSDCDG00000021587 ENSDCDG00000021586 COX7A2L (ENSDCDG00000021585) KCNG3 (ENSDCDG00000021584) OXER1 (ENSDCDG00000021581) haao (ENSDCDG00000021579) ENSDCDG00000021577 THADA (ENSDCDG00000021568) PLEKHH2 (ENSDCDG00000021507) epcam (ENSDCDG00000021497) #21 ENSDCDG00000021496 ENSDCDG00000021494 ENSDCDG00000021493 calm2a (ENSDCDG00000021453) #22 TTC7A (ENSDCDG00000021431) #24 mcfd2 (ENSDCDG00000021424) #25 ENSDCDG00000021421 socs5b (ENSDCDG00000021418) PRKCE (ENSDCDG00000021271) #32 epas1b (ENSDCDG00000020764) SRBD1 (ENSDCDG00000019813) #33 six2a (ENSDCDG00000019786) #34 six3a (ENSDCDG00000019783) #35 CAMKMT (ENSDCDG00000019776) #36 prepl (ENSDCDG00000019768) #37 SLC3A1 (ENSDCDG00000019761) ppm1ba (ENSDCDG00000019754) LRPPRC (ENSDCDG00000017366) abcg8 (ENSDCDG00000017282) Otomorpha ANCESTRAL SPECIES 1 ENSGT00990000204854 ENSGT00940000157846.d ENSGT00390000011433.s.b ENSGT00390000003855.a #9 ENSGT00940000159080 #8 ENSGT00940000177029.a.a ENSGT00940000177029.b ENSGT00940000154292.a.b.b #10 ENSGT00940000157364.B ##13 ENSGT00940000176000 ENSGT00940000163749 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #10 ENSGT00940000158952 #12 ENSGT00550000074867 #20 ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01100000263502.B.a.a.d.b.c.b ENSGT00940000155571.B ENSGT00950000183027.a.b.c.b ENSGT00950000183054.b.c Otophysi ANCESTRAL SPECIES 225 ENSGT00530000063425.a.a.b ##17 ENSGT00550000074867 #20 ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C.f #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e.l ENSGT00940000161584 ENSGT00940000156070.a.b ENSGT00940000160346.A ##35 ENSGT00940000160346.B.e #35 ENSGT00940000158292.a.a #34 ENSGT00940000154711.a.b #32 Characiphysae ANCESTRAL SPECIES 93 ENSGT00940000155930.g.b ENSGT00940000154711.a.b #32 ENSGT00940000158292.a.a #34 ENSGT00940000160346.B.e #35 ENSGT00940000160346.A ##35 ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 #29 ENSGT00390000016617 #28 ENSGT00950000183100.C.f #27 ENSGT00390000013481.c.b.a ENSGT00940000164285.a.e ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00940000164251.c ENSGT00940000167711.a.a ENSGT00390000018245 #21 ENSGT00550000074867 #20 ENSGT00530000063425.a.a.b ##17 Channel catfish MODERN SPECIES 4 ENSIPUG00000007870 Prkce (ENSIPUG00000007876) #32 ENSIPUG00000007935 ##35 Six2 (ENSIPUG00000007963) #34 ppm1bb (ENSIPUG00000007982) zfp36l2 (ENSIPUG00000008010) OXER1 (ENSIPUG00000008015) mta3 (ENSIPUG00000008039) KCNG3 (ENSIPUG00000008184) cox7a2l (ENSIPUG00000008189) RHOQ (ENSIPUG00000008216) #29 pigf (ENSIPUG00000008235) #28 cript (ENSIPUG00000008308) #27 gch2 (ENSIPUG00000008326) socs5a (ENSIPUG00000008349) CALM (ENSIPUG00000008361) #22 ENSIPUG00000008399 #21 MSH2 (ENSIPUG00000008454) #20 fbxo11 (ENSIPUG00000008553) ##17 foxn2 (ENSIPUG00000008720) #16 fshr (ENSIPUG00000008746) #12 ENSIPUG00000008972 #10 ENSIPUG00000009365 asb3 (ENSIPUG00000009379) #8 ENSIPUG00000009393 tmem94 (ENSIPUG00000009480) tdrkh (ENSIPUG00000009673) mbtd1 (ENSIPUG00000009729) Slc9a3r1 (ENSIPUG00000009831) narf (ENSIPUG00000009858) c13h17orf62 (ENSIPUG00000009877) Characiphysae_b ANCESTRAL SPECIES 3 ENSGT00940000155930.g.b ENSGT00940000154711.a.b #32 ENSGT00940000158292.a.a #34 ENSGT00940000160346.B.e #35 ENSGT00940000160346.A ##35 ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 #29 ENSGT00390000016617 #28 ENSGT00950000183100.C.f #27 ENSGT00390000013481.c.b.a ENSGT00940000164285.a.e ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00940000164251.c ENSGT00940000167711.a.a ENSGT00390000018245 #21 ENSGT00550000074867 #20 ENSGT00530000063425.a.a.b ##17 ENSGT00940000159118 #16 ENSGT00940000158952 #12 ENSGT00940000154292.a.b.a #10 ENSGT00940000177029.a.b ENSGT00940000159080 #8 ENSGT00930000151032.B ENSGT00390000016550 ENSGT00940000166206 ENSGT00940000153840.a.a.a.a ENSGT00950000182849.B.c.b.b Characoidei ANCESTRAL SPECIES 6 ENSGT00390000000854.c.a ENSGT00940000155930.g.b ENSGT00940000154711.a.b #32 ENSGT00940000158292.a.a #34 ENSGT00940000160346.A ##35 ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 #29 ENSGT00390000016617 #28 ENSGT00950000183100.C.f #27 ENSGT00390000013481.c.b.a ENSGT00940000164285.a.e ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00550000074867 #20 ENSGT00530000063425.a.a.b ##17 ENSGT00940000159118 #16 ENSGT00940000158952 #12 ENSGT00940000154292.a.b.a #10 ENSGT00940000177029.a.b ENSGT00940000159080 #8 ENSGT00930000151032.B ENSGT00390000016550 ENSGT00940000166206 ENSGT00940000153840.a.a.a.a ENSGT00950000182849.B.c.b.b ENSGT00940000153514.a.b ENSGT00390000004691 ENSGT00940000155590.i Red-bellied piranha MODERN SPECIES 3 EPAS1 (ENSPNAG00000009861) PRKCE (ENSPNAG00000009835) #32 six2b (ENSPNAG00000009779) #34 ENSPNAG00000009766 ##35 ppm1bb (ENSPNAG00000009742) zfp36l2 (ENSPNAG00000009692) OXER1 (ENSPNAG00000009683) mta3 (ENSPNAG00000009661) KCNG3 (ENSPNAG00000009567) cox7a2l (ENSPNAG00000009558) rhoq (ENSPNAG00000009548) #29 pigf (ENSPNAG00000009529) #28 cript (ENSPNAG00000009503) #27 gch2 (ENSPNAG00000009481) socs5a (ENSPNAG00000009458) calm2b (ENSPNAG00000009449) #22 ENSPNAG00000009428 #21 msh2 (ENSPNAG00000009400) #20 ENSPNAG00000009336 ##17 foxn2b (ENSPNAG00000009227) #16 fshr (ENSPNAG00000009201) #12 ENSPNAG00000009070 #10 asb3 (ENSPNAG00000008926) #8 ENSPNAG00000008915 TMEM94 (ENSPNAG00000008880) tdrkh (ENSPNAG00000008783) MBTD1 (ENSPNAG00000005449) nherf1a (ENSPNAG00000008743) narf (ENSPNAG00000008736) cybc1 (ENSPNAG00000001175) dnajb12b (ENSPNAG00000008719) Mexicana tetra MODERN SPECIES 21 ENSAMXG00000000070 ##35 ppm1bb (ENSAMXG00000000072) zfp36l2 (ENSAMXG00000040114) ENSAMXG00000035448 OXER1 (ENSAMXG00000025124) mta3 (ENSAMXG00000016007) KCNG3 (ENSAMXG00000043786) cox7a2l (ENSAMXG00000030489) ENSAMXG00000039574 rhoq (ENSAMXG00000015971) #29 pigf (ENSAMXG00000041319) #28 cript (ENSAMXG00000037075) #27 ENSAMXG00000025123 gch2 (ENSAMXG00000039949) socs5a (ENSAMXG00000025122) calm2b (ENSAMXG00000031853) #22 ENSAMXG00000015893 msh2 (ENSAMXG00000015880) #20 ENSAMXG00000011591 ##17 foxn2b (ENSAMXG00000040568) #16 fshr (ENSAMXG00000011613) #12 ENSAMXG00000011628 #10 ENSAMXG00000041026 ENSAMXG00000036920 asb3 (ENSAMXG00000030442) #8 ENSAMXG00000011641 TMEM94 (ENSAMXG00000011661) tdrkh (ENSAMXG00000011664) MBTD1 (ENSAMXG00000011666) nherf1a (ENSAMXG00000011672) narf (ENSAMXG00000011681) Electric eel MODERN SPECIES 62 sncgb (ENSEEEG00000017222) glud1b (ENSEEEG00000017058) EPAS1 (ENSEEEG00000017053) PRKCE (ENSEEEG00000017048) #32 six2b (ENSEEEG00000017047) #34 six3b (ENSEEEG00000017045) #35 ppm1bb (ENSEEEG00000017043) zfp36l2 (ENSEEEG00000017042) mta3 (ENSEEEG00000016994) KCNG3 (ENSEEEG00000016988) cox7a2l (ENSEEEG00000016987) rhoq (ENSEEEG00000016986) #29 pigf (ENSEEEG00000016985) #28 cript (ENSEEEG00000016984) #27 gch2 (ENSEEEG00000016983) calm2b (ENSEEEG00000016981) #22 ENSEEEG00000016980 #21 msh2 (ENSEEEG00000016977) #20 ENSEEEG00000016499 ##17 foxn2b (ENSEEEG00000016493) #16 fshr (ENSEEEG00000016483) #12 ENSEEEG00000016452 #10 ENSEEEG00000016447 asb3 (ENSEEEG00000016446) #8 ENSEEEG00000016441 TMEM94 (ENSEEEG00000016077) tdrkh (ENSEEEG00000016061) MBTD1 (ENSEEEG00000016060) nherf1a (ENSEEEG00000016059) narf (ENSEEEG00000016043) cybc1 (ENSEEEG00000016042) Cyprinoidei ANCESTRAL SPECIES 18 ENSGT00550000074867 #20 ENSGT00950000182980.a.b.b.b.hc #22 ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C.f #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e.l ENSGT00940000156070.a.b ENSGT00940000160346.B.e #35 ENSGT00940000158292.a.a #34 ENSGT00940000154711.a.b #32 ENSGT00940000155930.g.b ENSGT00390000000854.c.a.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 64 ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ENSGT00390000003855.a.a #9 ENSGT00940000159080.f #8 ENSGT00940000154292.a.b.b.b #10 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #10 ENSGT00940000158952.h #12 ENSGT00940000159118.p.b #16 ENSGT00530000063425.a.a.b.a ##17 ENSGT00550000074867.r #20 ENSGT00950000182980.a.b.b.b.hc.a #22 ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.e.a #27 ENSGT00390000016617.s #28 ENSGT00940000155970.ab #29 ENSGT00940000154815.b.a.c.a.a ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a ENSGT01030000234573.B.c.b.a.a ENSGT00990000203619.A.b.b.b.a.e.l.c ENSGT00940000161584.l.a ENSGT00940000156070.a.b.a ENSGT00940000160346.B.e.b #35 ENSGT00940000158292.a.a.b #34 ENSGT00940000154711.a.b.a #32 Goldfish MODERN SPECIES 3 ODAD2 (ENSCARG00000013961) mpp7a (ENSCARG00000012737) waca (ENSCARG00000012662) bambia (ENSCARG00000012651) MAP3K8 (ENSCARG00000012648) MTPAP (ENSCARG00000012640) ENSCARG00000012634 svila (ENSCARG00000012484) psme4b (ENSCARG00000012316) chac2 (ENSCARG00000012289) #9 asb3 (ENSCARG00000012262) #8 ENSCARG00000006802 #10 foxn2b (ENSCARG00000006556) #16 ENSCARG00000005473 ##17 msh2 (ENSCARG00000005390) #20 calm2b (ENSCARG00000005358) #22 gch2 (ENSCARG00000005337) CRIPT (ENSCARG00000005325) #27 pigf (ENSCARG00000005319) #28 rhoq (ENSCARG00000005311) #29 cox7a2l (ENSCARG00000005302) efna5b (ENSCARG00000005293) dgcr6 (ENSCARG00000005282) RASAL1 (ENSCARG00000005085) DTX1 (ENSCARG00000005016) ENSCARG00000004998 si:ch73-130a3.4 (ENSCARG00000004978) serpind1 (ENSCARG00000004964) snap29 (ENSCARG00000004954) ENSCARG00000004949 SLC25A1 (ENSCARG00000004930) Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ENSGT00390000003855.a.a #9 ENSGT00940000159080.f #8 ENSGT00940000154292.a.b.b.b #10 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #10 ENSGT00940000158952.h #12 ENSGT00940000159118.p.b #16 ENSGT00530000063425.a.a.b.a ##17 ENSGT00550000074867.r #20 ENSGT00950000182980.a.b.b.b.hc.a #22 ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.f #27 ENSGT00390000016617.s #28 ENSGT00940000155970.ab #29 ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a ENSGT01030000234573.B.c.b.a.a ENSGT00990000203619.A.b.b.b.a.e.l.c ENSGT00940000161584.l.a ENSGT00940000156070.a.b.a ENSGT00940000160346.B.e.b #35 ENSGT00940000158292.a.a.b #34 ENSGT00940000154711.a.b.a #32 ENSGT00940000155930.g.b.b Golden-line barbel MODERN SPECIES 385 ENSSGRG00000021643 #10 ENSSGRG00000021846 fshr (ENSSGRG00000021848) #12 foxn2b (ENSSGRG00000021850) #16 ENSSGRG00000021874 ##17 msh2 (ENSSGRG00000022768) #20 calm2b (ENSSGRG00000022781) #22 gch2 (ENSSGRG00000022901) cript (ENSSGRG00000022908) #27 pigf (ENSSGRG00000022912) #28 rhoq (ENSSGRG00000022913) #29 cox7a2l (ENSSGRG00000022914) mta3 (ENSSGRG00000022920) OXER1 (ENSSGRG00000023152) zfp36l2 (ENSSGRG00000023154) ppm1bb (ENSSGRG00000023155) six3b (ENSSGRG00000023158) #35 six2b (ENSSGRG00000023159) #34 PRKCE (ENSSGRG00000023162) #32 EPAS1 (ENSSGRG00000023397) ENSSGRG00000023467 sncgb (ENSSGRG00000024280) Common carp reference MODERN SPECIES 25 ODAD2 (ENSCCRG00000015428) mpp7a (ENSCCRG00000061976) waca (ENSCCRG00000026819) bambia (ENSCCRG00000067488) ENSCCRG00000020144 ENSCCRG00000020143 svila (ENSCCRG00000015186) psme4b (ENSCCRG00000045880) chac2 (ENSCCRG00000080988) #9 asb3 (ENSCCRG00000045913) #8 ENSCCRG00000080925 #10 ENSCCRG00000047406 foxn2b (ENSCCRG00000067390) #16 ENSCCRG00000002427 ##17 msh2 (ENSCCRG00000061893) #20 calm2b (ENSCCRG00000082265) #22 socs5a (ENSCCRG00000061434) gch2 (ENSCCRG00000067312) cript (ENSCCRG00000019690) #27 pigf (ENSCCRG00000070582) #28 rhoq (ENSCCRG00000019701) #29 cox7a2l (ENSCCRG00000056079) KCNG3 (ENSCCRG00000062429) mta3 (ENSCCRG00000064946) OXER1 (ENSCCRG00000069397) zfp36l2 (ENSCCRG00000066647) ppm1bb (ENSCCRG00000073667) six3b (ENSCCRG00000032637) #35 six2b (ENSCCRG00000011444) #34 ENSCCRG00000015198 #32 ENSCCRG00000046613 Cyprininae ANCESTRAL SPECIES 88 ENSGT00940000156232.b.b ENSGT00440000037780.a.z ENSGT00940000154101.b.c.b.b ENSGT00940000158806.q ENSGT00940000158582.i ENSGT00940000166891.a.h ENSGT00940000154653.p.b ENSGT00390000011433.s.b.a ENSGT00390000003855.a.b #9 ENSGT00940000159080.e #8 ENSGT00940000154292.a.b.a.b #10 ENSGT00940000158952.g #12 ENSGT00940000159118.p.a #16 ENSGT00530000063425.a.a.b.b ##17 ENSGT00550000074867.q #20 ENSGT00950000182980.a.b.b.b.hc.b #22 ENSGT00940000164285.a.e.c ENSGT00390000013481.c.b.a.g ENSGT00950000183100.C.f #27 ENSGT00390000016617.t #28 ENSGT00940000155970.bb #29 ENSGT00940000154815.b.a.c.a.b ENSGT00940000159658.b.a.b ENSGT01030000234573.B.c.b.a.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT00940000161584.l.b ENSGT00940000156070.a.b.b ENSGT00940000160346.B.e.a #35 ENSGT00940000158292.a.a.a #34 ENSGT00940000154711.a.b.b #32 ENSGT00940000155930.g.b.a Cyprininae_a ANCESTRAL SPECIES 8 ENSGT00940000156232.b.b ENSGT00440000037780.a.z ENSGT00940000154101.b.c.b.b ENSGT00940000158806.q ENSGT00940000158582.i ENSGT00940000166891.a.h ENSGT00940000154653.p.b ENSGT00390000011433.s.b.a ENSGT00390000003855.a.b #9 ENSGT00940000159080.e #8 ENSGT00940000154292.a.b.a.b #10 ENSGT00940000158952.g #12 ENSGT00940000159118.p.a #16 ENSGT00530000063425.a.a.b.b ##17 ENSGT00550000074867.q #20 ENSGT00950000182980.a.b.b.b.hc.b #22 ENSGT00940000164285.a.e.c ENSGT00390000013481.c.b.a.g ENSGT00950000183100.C.e.b #27 ENSGT00390000016617.t #28 ENSGT00940000155970.bb #29 ENSGT00940000154815.b.a.c.a.a ENSGT00940000159658.b.a.b ENSGT01030000234573.B.c.b.a.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT00940000161584.l.b ENSGT00940000156070.a.b.b ENSGT00940000160346.B.e.a #35 ENSGT00940000158292.a.a.a #34 ENSGT00940000154711.a.b.b #32 ENSGT00940000155930.g.b.a Common carp reference MODERN SPECIES 44 mpp7a (ENSCCRG00000004348) waca (ENSCCRG00000020077) bambia (ENSCCRG00000026806) ENSCCRG00000020148 ENSCCRG00000061636 svila (ENSCCRG00000047293) psme4b (ENSCCRG00000047187) chac2 (ENSCCRG00000045910) #9 asb3 (ENSCCRG00000015097) #8 ENSCCRG00000007045 ENSCCRG00000005363 #10 fshr (ENSCCRG00000064180) #12 foxn2b (ENSCCRG00000002444) #16 ENSCCRG00000058473 ##17 msh2 (ENSCCRG00000079291) #20 calm2b (ENSCCRG00000064783) #22 socs5a (ENSCCRG00000059664) gch2 (ENSCCRG00000060432) cript (ENSCCRG00000056291) #27 pigf (ENSCCRG00000003343) #28 rhoq (ENSCCRG00000073831) #29 cox7a2l (ENSCCRG00000077249) KCNG3 (ENSCCRG00000005654) mta3 (ENSCCRG00000010443) OXER1 (ENSCCRG00000073858) zfp36l2 (ENSCCRG00000055269) ppm1bb (ENSCCRG00000030208) six3b (ENSCCRG00000060810) #35 six2b (ENSCCRG00000044346) #34 ENSCCRG00000046601 #32 ENSCCRG00000015187 Golden-line barbel MODERN SPECIES 46 ENSSGRG00000046352 ENSSGRG00000044014 #10 fshr (ENSSGRG00000043987) #12 foxn2b (ENSSGRG00000043985) #16 ENSSGRG00000043974 ##17 msh2 (ENSSGRG00000043582) #20 calm2b (ENSSGRG00000043494) #22 socs5a (ENSSGRG00000043490) ENSSGRG00000043489 cript (ENSSGRG00000043488) #27 pigf (ENSSGRG00000043487) #28 rhoq (ENSSGRG00000043483) #29 cox7a2l (ENSSGRG00000043481) mta3 (ENSSGRG00000043259) OXER1 (ENSSGRG00000043254) zfp36l2 (ENSSGRG00000043253) ppm1bb (ENSSGRG00000043251) six3b (ENSSGRG00000043250) #35 six2b (ENSSGRG00000043249) #34 PRKCE (ENSSGRG00000043155) #32 EPAS1 (ENSSGRG00000043140) glud1b (ENSSGRG00000042621) Goldfish MODERN SPECIES 30 bambia (ENSCARG00000018753) MAP3K8 (ENSCARG00000018758) MTPAP (ENSCARG00000018770) ENSCARG00000018815 svila (ENSCARG00000019153) psme4b (ENSCARG00000028435) ENSCARG00000032377 asb3 (ENSCARG00000032386) #8 ENSCARG00000032577 #10 ENSCARG00000038084 ENSCARG00000038088 fshr (ENSCARG00000038097) #12 foxn2b (ENSCARG00000038104) #16 ENSCARG00000038131 ##17 msh2 (ENSCARG00000038661) #20 calm2b (ENSCARG00000039693) #22 socs5a (ENSCARG00000039762) gch2 (ENSCARG00000039792) cript (ENSCARG00000039816) #27 pigf (ENSCARG00000039840) #28 rhoq (ENSCARG00000039851) #29 cox7a2l (ENSCARG00000039886) KCNG3 (ENSCARG00000039891) mta3 (ENSCARG00000040053) OXER1 (ENSCARG00000045611) zfp36l2 (ENSCARG00000045621) ppm1bb (ENSCARG00000045649) six3b (ENSCARG00000045699) #35 six2b (ENSCARG00000045714) #34 PRKCE (ENSCARG00000045751) #32 EPAS1 (ENSCARG00000046819) Zebrafish MODERN SPECIES 3 mpp7a (ENSDARG00000102470) waca (ENSDARG00000012577) bambia (ENSDARG00000055381) MAP3K8 (ENSDARG00000061710) MTPAP (ENSDARG00000076155) ENSDARG00000089871 svila (ENSDARG00000055075) psme4b (ENSDARG00000018742) chac2 (ENSDARG00000055078) #9 asb3 (ENSDARG00000005246) #8 nrxn1a (ENSDARG00000061647) fshr (ENSDARG00000071494) #12 foxn2b (ENSDARG00000045105) #16 ENSDARG00000061631 ##17 msh2 (ENSDARG00000018022) #20 calm2b (ENSDARG00000015050) #22 socs5a (ENSDARG00000100717) gch2 (ENSDARG00000099101) cript (ENSDARG00000102511) #27 pigf (ENSDARG00000032780) #28 rhoq (ENSDARG00000025953) #29 cox7a2l (ENSDARG00000054907) KCNG3 (ENSDARG00000061622) mta3 (ENSDARG00000054903) OXER1 (ENSDARG00000087084) zfp36l2 (ENSDARG00000021806) ppm1bb (ENSDARG00000011496) six3b (ENSDARG00000054879) #35 six2b (ENSDARG00000054878) #34 PRKCE (ENSDARG00000003008) #32 EPAS1 (ENSDARG00000008697) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 600 ENSGT00550000074867 #20 ENSGT00390000018245.i.a #21 ENSGT00950000182980.a.b.b.b.ic #22 P. kingsleyae MODERN SPECIES 18 ENSPKIG00000010724 ENSPKIG00000010681 ENSPKIG00000010584 ENSPKIG00000010539 ENSPKIG00000010519 ENSPKIG00000009979 ENSPKIG00000009714 ZFP36L2 (ENSPKIG00000009699) mta3 (ENSPKIG00000009654) KCNG3 (ENSPKIG00000009631) COX7A2L (ENSPKIG00000009622) ENSPKIG00000009288 ENSPKIG00000008978 msh2 (ENSPKIG00000008812) #20 epcam (ENSPKIG00000008710) #21 calm2a (ENSPKIG00000008660) #22 cript (ENSPKIG00000008644) #27 pigf (ENSPKIG00000008632) #28 abcg2c (ENSPKIG00000008594) PLA2G12B (ENSPKIG00000008564) ENSPKIG00000008554 ENSPKIG00000008543 ENSPKIG00000008530 valopb (ENSPKIG00000008500) STK32C (ENSPKIG00000008332) tmem254 (ENSPKIG00000008259) mxtx2 (ENSPKIG00000008236) bms1 (ENSPKIG00000008165) TSPAN14 (ENSPKIG00000008121) SH2D4B (ENSPKIG00000008088) ENSPKIG00000008070 Osteoglossiformes ANCESTRAL SPECIES 18 ENSGT00530000063603.B #7 ENSGT00390000003855.a #9 ENSGT00940000157364.B ##13 ENSGT00940000163055 ENSGT00940000158817 #14 ENSGT00390000006820 #15 ENSGT00940000159118 #16 ENSGT00530000063425.a.a.a.a ##17 ENSGT00550000075024 #18 ENSGT00940000161424 #19 ENSGT00390000018245.j #21 ENSGT00940000164251 ENSGT00390000018245.i.b #21 ENSGT00940000164218 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b.jc #22 ENSGT00940000167263 ENSGT00940000158638 #24 ENSGT00940000154141.B #25 ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.a ENSGT00950000183100.C #27 ENSGT00390000016617 #28 ENSGT00940000155970 #29 ENSGT00940000154815.b.a ENSGT00940000154815.b.b ENSGT00940000159658.b.a.d ENSGT01030000234573.B.c.b.a.e ENSGT00940000161584.s.b ENSGT00940000158434.r Asian bonytongue MODERN SPECIES 23 GPR75 (ENSSFOG00015002045) erlec1 (ENSSFOG00015001975) #7 chac2 (ENSSFOG00015001968) #9 nrxn1b (ENSSFOG00015001893) #10 LHCGR (ENSSFOG00015001859) ##13 ENSSFOG00015026862 STON1 (ENSSFOG00015001840) #14 ppp1r21 (ENSSFOG00015001831) #15 FOXN2 (ENSSFOG00015001820) #16 ENSSFOG00015001698 ##17 msh6 (ENSSFOG00015001648) #18 KCNK12 (ENSSFOG00015001638) #19 epcam (ENSSFOG00015001618) #21 ENSSFOG00015001588 ENSSFOG00015024584 calm2a (ENSSFOG00015001500) #22 TTC7A (ENSSFOG00015001488) #24 mcfd2 (ENSSFOG00015001471) #25 ENSSFOG00015001463 socs5b (ENSSFOG00015001455) gch2 (ENSSFOG00015030339) rhoq (ENSSFOG00015032488) #29 epas1b (ENSSFOG00015001376) PRKCE (ENSSFOG00015001283) #32 SRBD1 (ENSSFOG00015001128) #33 six2a (ENSSFOG00015027707) #34 six3a (ENSSFOG00015001111) #35 CAMKMT (ENSSFOG00015001093) #36 prepl (ENSSFOG00015001085) #37 SLC3A1 (ENSSFOG00015001079) ppm1ba (ENSSFOG00015001047) P. kingsleyae MODERN SPECIES 74 nsmce4a (ENSPKIG00000021110) cdh23 (ENSPKIG00000021156) vsir (ENSPKIG00000021254) ENSPKIG00000021271 ENSPKIG00000021282 PLPP4 (ENSPKIG00000021303) wdr11 (ENSPKIG00000021337) ENSPKIG00000021389 fgfr2 (ENSPKIG00000021449) ATE1 (ENSPKIG00000021502) KCNK12 (ENSPKIG00000021547) #19 epcam (ENSPKIG00000021561) #21 ENSPKIG00000021577 ENSPKIG00000021596 ENSPKIG00000021614 CALM2 (ENSPKIG00000021634) #22 si:ch211-93n23.7 (ENSPKIG00000021652) TTC7A (ENSPKIG00000021686) #24 ENSPKIG00000021765 mcfd2 (ENSPKIG00000021779) #25 ENSPKIG00000021786 socs5b (ENSPKIG00000021801) gch2 (ENSPKIG00000021816) cript (ENSPKIG00000021848) #27 rhoq (ENSPKIG00000021865) #29 epas1b (ENSPKIG00000021883) PRKCE (ENSPKIG00000021922) #32 SRBD1 (ENSPKIG00000021973) #33 six2a (ENSPKIG00000022042) #34 six3a (ENSPKIG00000022071) #35 CAMKMT (ENSPKIG00000022102) #36 Vertebrata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a ##22 Hagfish MODERN SPECIES 404 calm3b (ENSEBUG00000004122) ##22 ENSEBUG00000007205 ENSEBUG00000011352 rtcb (ENSEBUG00000014235) Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.a.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.a.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.a.a ##22 Reedfish MODERN SPECIES 6 DACT2 (ENSECRG00000019838) ENSECRG00000019784 ENSECRG00000019757 ENSECRG00000019743 ENSECRG00000019725 gch2 (ENSECRG00000019713) SOCS5 (ENSECRG00000019700) #26 ENSECRG00000019680 mcfd2 (ENSECRG00000019661) #25 ENSECRG00000019652 KCNK12 (ENSECRG00000019639) #19 msh2 (ENSECRG00000019592) #20 epcam (ENSECRG00000019533) #21 ENSECRG00000019483 ENSECRG00000018748 ENSECRG00000018599 ##22 ENSECRG00000018572 TTC7A (ENSECRG00000018493) #24 msh6 (ENSECRG00000018464) #18 FBXO11 (ENSECRG00000018389) #17 foxn2b (ENSECRG00000018362) #16 ppp1r21 (ENSECRG00000018300) #15 STON1 (ENSECRG00000018279) #14 gtf2a1l (ENSECRG00000018262) LHCGR (ENSECRG00000018230) #13 lhcgr (ENSECRG00000018198) #13 ENSECRG00000018181 TARBP1 (ENSECRG00000018118) JAG1 (ENSECRG00000018005) ENSECRG00000017974 mkks (ENSECRG00000017952) Elephant shark MODERN SPECIES 1534 XPO5 (ENSCMIG00000002430) tp53bp2a (ENSCMIG00000003081) ENSCMIG00000003092 LHCGR (ENSCMIG00000003099) #13 ENSCMIG00000003114 STON1 (ENSCMIG00000003120) #14 ppp1r21 (ENSCMIG00000003250) #15 foxn2b (ENSCMIG00000003675) #16 FBXO11 (ENSCMIG00000003703) #17 msh6 (ENSCMIG00000003786) #18 KCNK12 (ENSCMIG00000003791) #19 msh2 (ENSCMIG00000003917) #20 epcam (ENSCMIG00000004307) #21 ENSCMIG00000004318 ENSCMIG00000004326 ENSCMIG00000004354 ##22 ENSCMIG00000004414 TTC7A (ENSCMIG00000004429) #24 ENSCMIG00000004458 dync2li1 (ENSCMIG00000004465) abcg5 (ENSCMIG00000004473) ENSCMIG00000004479 LRPPRC (ENSCMIG00000004641) ppm1ba (ENSCMIG00000004894) ENSCMIG00000004907 SLC3A1 (ENSCMIG00000004920) ENSCMIG00000004928 ENSCMIG00000004932 #37 CAMKMT (ENSCMIG00000004946) #36 SRBD1 (ENSCMIG00000005064) #33 PRKCE (ENSCMIG00000005496) #32 Gnathostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.a.b ##22 Elephant shark MODERN SPECIES 1774 psmc1a (ENSCMIG00000016133) NRDE2 (ENSCMIG00000016152) ENSCMIG00000016189 ##22 ttc7b (ENSCMIG00000016332) RPS6KA5 (ENSCMIG00000016590) DGLUCY (ENSCMIG00000016630) GPR68 (ENSCMIG00000016632) ENSCMIG00000016633 smek1 (ENSCMIG00000016652) Gnathostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.a.b ##22 Reedfish DUPLICATION Reedfish MODERN SPECIES 80 ENSECRG00000020896 ENSECRG00000020869 ##22 Reedfish MODERN SPECIES 6 ENSECRG00000017187 irf2bp2b (ENSECRG00000017168) tomm20b (ENSECRG00000017143) RBM34 (ENSECRG00000017099) ARID4B (ENSECRG00000017017) ggps1 (ENSECRG00000016961) tbce (ENSECRG00000016920) b3galnt2 (ENSECRG00000016891) GNG4 (ENSECRG00000016869) LYST (ENSECRG00000016700) NID1 (ENSECRG00000016589) gpr137ba (ENSECRG00000016556) ero1b (ENSECRG00000016434) egln1b (ENSECRG00000016369) tsnax (ENSECRG00000016347) ENSECRG00000016330 ##22 DISC1 (ENSECRG00000016303) sipa1l2 (ENSECRG00000016262) ENSECRG00000016192 ntpcr (ENSECRG00000016167) PCNX2 (ENSECRG00000013632) MAP3K21 (ENSECRG00000013457) IL22RA2 (ENSECRG00000013423) ENSECRG00000013390 olig3 (ENSECRG00000013379) TNFAIP3 (ENSECRG00000013362) perp (ENSECRG00000013349) ARFGEF3 (ENSECRG00000013278) COX20 (ENSECRG00000021977) ENSECRG00000021971 desi2 (ENSECRG00000021939) Gnathostomata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b ##22 Euteleostomi ANCESTRAL SPECIES 1183 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 Sarcopterygii ANCESTRAL SPECIES 1015 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 Tetrapoda ANCESTRAL SPECIES 69 ENSGT00940000164006 ENSGT00950000183024.a.a.a ENSGT00390000007539 ENSGT00390000002089.a.a.b ENSGT01000000214440.C ENSGT00390000015119 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00940000166053 ENSGT00940000166766 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00390000006255 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000161450 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 Amniota ANCESTRAL SPECIES 56 ENSGT00940000157074 ENSGT00950000182985.b.b ENSGT00940000160539 ENSGT00940000164137 ENSGT00940000164916 ENSGT00940000165892 ENSGT00940000153986.b.b ENSGT00940000160310 ENSGT00940000160341 ENSGT00390000018173 ENSGT00940000155559.a.b ENSGT00940000161083 ENSGT01000000214440.C ENSGT00390000015119 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 Sauria ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b ##22 Lepidosauria ANCESTRAL SPECIES 47 ENSGT00940000156484.a ENSGT00940000156457 ENSGT00510000049875 ENSGT00390000002615 ENSGT00390000008374 ENSGT00940000159139 ENSGT00940000156954 ENSGT00940000159589 ENSGT01030000234573.B.c.b.b ENSGT00940000159914 ENSGT00390000015119 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 ENSGT00950000182980.a.b.a.b.b ##22 ENSGT00940000161083 ENSGT00940000155559.a.b ENSGT00390000018173 ENSGT00940000164608 ENSGT00940000153433.B.b ENSGT00940000166208 ENSGT00940000160310 ENSGT00940000153986.b.b ENSGT00940000165892 ENSGT00940000164916 ENSGT00940000164137 ENSGT00940000160539 ENSGT00950000182985.b.b ENSGT00940000157074 Episquamata ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b ##22 Laterata ANCESTRAL SPECIES 25 ENSGT00940000156457 ENSGT01010000222658 ENSGT00510000049875 ENSGT00390000002615 ENSGT00390000008374 ENSGT00940000159139 ENSGT00940000156954 ENSGT00940000159589 ENSGT01030000234573.B.c.b.b ENSGT00940000159914 ENSGT00390000015119 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 ENSGT00950000182980.a.b.a.b.b ##22 ENSGT00940000161083 ENSGT00940000155559.a.b ENSGT00390000018173 ENSGT00940000164608 ENSGT00940000153433.B.b ENSGT00940000166208.e ENSGT00940000160310 ENSGT00960000190482 ENSGT00940000153986.b.b ENSGT00940000165892 ENSGT00940000164916.b ENSGT00990000210308 ENSGT00940000164916.a ENSGT00940000164137 Common wall lizard MODERN SPECIES 7 UBXN1 (ENSPMRG00000016202) ENSPMRG00000016216 CSKMT (ENSPMRG00000016229) ENSPMRG00000016249 INTS5 (ENSPMRG00000016252) GANAB (ENSPMRG00000016257) B3GAT3 (ENSPMRG00000016275) EML3 (ENSPMRG00000016408) MTA2 (ENSPMRG00000017151) TUT1 (ENSPMRG00000017357) WDR74 (ENSPMRG00000017386) STX5 (ENSPMRG00000017441) ENSPMRG00000017478 TMEM223 (ENSPMRG00000017751) SLC3A2 (ENSPMRG00000017758) ENSPMRG00000017768 ##22 RPS6KA4 (ENSPMRG00000017796) ENSPMRG00000017807 PRDX5 (ENSPMRG00000017816) TRMT112 (ENSPMRG00000017819) ENSPMRG00000017826 ENSPMRG00000017834 ENSPMRG00000017837 ENSPMRG00000017842 KCNK4 (ENSPMRG00000017855) ENSPMRG00000017870 GPR137 (ENSPMRG00000017876) ENSPMRG00000017880 ENSPMRG00000017885 ENSPMRG00000017891 PLCB3 (ENSPMRG00000017903) Actinopterygii ANCESTRAL SPECIES 984 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 Neopterygii ANCESTRAL SPECIES 761 ENSGT00940000156646 ENSGT00950000182980.a.b.b.a.b ##22 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.a ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.a ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.a ##22 Atlantic herring MODERN SPECIES 4 pkdcca (ENSCHAG00000019596) EML4 (ENSCHAG00000018324) ENSCHAG00000018278 ENSCHAG00000018252 COX7A2L (ENSCHAG00000018246) KCNG3 (ENSCHAG00000018228) OXER1 (ENSCHAG00000018207) ENSCHAG00000018173 haao (ENSCHAG00000018131) zfp36l2 (ENSCHAG00000018110) THADA (ENSCHAG00000017933) PLEKHH2 (ENSCHAG00000016959) epcam (ENSCHAG00000016870) #21 ENSCHAG00000016844 ENSCHAG00000016804 calm3a (ENSCHAG00000016632) ##22 si:ch211-93n23.7 (ENSCHAG00000016601) ENSCHAG00000015629 #24 mcfd2 (ENSCHAG00000015596) #25 ENSCHAG00000015540 socs5b (ENSCHAG00000015533) PRKCE (ENSCHAG00000014796) #32 epas1b (ENSCHAG00000013797) ENSCHAG00000013758 #29 ENSCHAG00000013697 ENSCHAG00000013687 ENSCHAG00000013678 vsir (ENSCHAG00000013637) cdh23 (ENSCHAG00000010209) eif3s6ip (ENSCHAG00000009927) dnajc12 (ENSCHAG00000009852) Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.a ##22 Asian bonytongue MODERN SPECIES 18 ENSSFOG00015030222 zgc:112285 (ENSSFOG00015003515) ENSSFOG00015025416 qki2 (ENSSFOG00015003466) prph2a (ENSSFOG00015003438) fshr (ENSSFOG00015024259) #12 foxn2b (ENSSFOG00015030249) #16 fbxo11a (ENSSFOG00015003018) ##17 ENSSFOG00015003119 ENSSFOG00015025149 ENSSFOG00015030973 ENSSFOG00015033342 ENSSFOG00015008338 msh2 (ENSSFOG00015008387) #20 ENSSFOG00015008420 #21 ENSSFOG00015008430 ##22 gch2 (ENSSFOG00015008466) cript (ENSSFOG00015008498) #27 pigf (ENSSFOG00015026580) #28 ENSSFOG00015026556 #29 ENSSFOG00015024601 ENSSFOG00015008756 cox7a2l (ENSSFOG00015024476) KCNG3 (ENSSFOG00015008804) mta3 (ENSSFOG00015008826) ZFP36L2 (ENSSFOG00015008894) ENSSFOG00015024440 ENSSFOG00015008930 ENSSFOG00015032448 ENSSFOG00015029926 ENSSFOG00015005185 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.b ##22 Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.a.b ##22 Asian bonytongue MODERN SPECIES 1 ttc9b (ENSSFOG00015027054) MAP3K10 (ENSSFOG00015006515) SIPA1L3 (ENSSFOG00015006579) QPCTL (ENSSFOG00015006707) six9 (ENSSFOG00015030551) ##34 six5 (ENSSFOG00015006762) tbcb (ENSSFOG00015006769) ENSSFOG00015006784 ENSSFOG00015006775 clptm1 (ENSSFOG00015006801) ENSSFOG00015006850 mrpl28 (ENSSFOG00015006866) gemin7 (ENSSFOG00015029458) bmp16 (ENSSFOG00015026725) ppp1r37 (ENSSFOG00015006918) ENSSFOG00015006993 ##22 PTGIR (ENSSFOG00015007014) ppm1na (ENSSFOG00015007029) rtn2a (ENSSFOG00015007054) rhoub (ENSSFOG00015026737) rab4b (ENSSFOG00015007110) ap2s1 (ENSSFOG00015007132) ENSSFOG00015007159 NPAS1 (ENSSFOG00015007185) tmem160 (ENSSFOG00015025662) ENSSFOG00015007263 slc1a5 (ENSSFOG00015007290) fkrp (ENSSFOG00015007336) STRN4 (ENSSFOG00015007351) PRKD2 (ENSSFOG00015007435) gpr184 (ENSSFOG00015031136) Osteoglossocephalai ANCESTRAL SPECIES 54 ENSGT00390000012589 ENSGT00950000183000.c.a.a ENSGT00940000165739 ENSGT00390000005498 ENSGT00390000013762.a.f ENSGT00390000013762.a.e ENSGT00770000120838.A ENSGT00510000048151.b ENSGT00510000048151.a ENSGT00940000154790.a.b ENSGT00940000160125 ENSGT00940000156646.c ENSGT00900000141164.q.b ENSGT00940000165651.b ENSGT00900000141164.r ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b ENSGT00940000160539 ENSGT00940000164137.a ENSGT00940000167292 ENSGT00940000164916 ENSGT00390000007971 ENSGT00390000009379 ENSGT00730000111179.a ENSGT01030000234620.a.b.b.a ENSGT01030000234924 ENSGT00940000157941 ENSGT00800000125313 Clupeocephala ANCESTRAL SPECIES 65 ENSGT00390000015415 ENSGT00950000182924.A.a ENSGT00940000165127.b ENSGT00940000165739 ENSGT00390000005498 ENSGT00390000013762.a.f ENSGT00510000048151.a ENSGT00940000154790.a.b ENSGT00940000160125 ENSGT00940000156646.c ENSGT00940000160303.a.a ENSGT00900000141164.r.b ENSGT00940000165651.b ENSGT00940000166331 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000160539 ENSGT00940000164137.a ENSGT00940000167292.a ENSGT00940000164916 ENSGT00390000007971 ENSGT00390000009379 ENSGT00730000111179.a ENSGT01030000234620.a.b.b.a ENSGT01030000234924 ENSGT00940000157941 ENSGT00800000125313 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 44 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00390000017583 ENSGT00940000159485 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Otophysi ANCESTRAL SPECIES 69 ENSGT00940000167916 ENSGT00940000158923.f ENSGT00940000154678.a.b ENSGT01030000235187 ENSGT00940000165615.a ENSGT00980000198612 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00940000157960.j ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 Characiphysae ANCESTRAL SPECIES 39 ENSGT00950000183026.B.c.a ENSGT00940000155349.c ENSGT00390000017040.n ENSGT00940000155947.a ENSGT00940000167916 ENSGT00940000158923.f ENSGT00980000198612 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00940000157960.j ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000157119.a ENSGT00940000153576.c.b.w ENSGT01100000263573.a.b ENSGT00940000157915 Characiphysae_b ANCESTRAL SPECIES 38 ENSGT01100000263624.e ENSGT00950000183026.B.c.a ENSGT00940000155349.c ENSGT00390000017040.n ENSGT00940000155947.a ENSGT00940000167916 ENSGT00940000158923.f ENSGT00390000017365.b.mc ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000157119.a ENSGT00940000153576.c.b.w ENSGT01100000263573.a.b ENSGT00940000157915 Characoidei ANCESTRAL SPECIES 53 ENSGT00730000110966.b ENSGT01100000263624.e ENSGT00950000183026.B.c.a ENSGT00940000155349.c ENSGT00390000017040.n ENSGT00940000155947.a ENSGT00940000158923.f ENSGT00390000017365.b.mc ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000157119.a ENSGT00940000153576.c.b.w ENSGT01100000263573.a.b ENSGT00940000157915 Mexicana tetra MODERN SPECIES 1340 slc37a4a (ENSAMXG00000020357) calm3a (ENSAMXG00000020356) ##22 PTGIR (ENSAMXG00000020353) ENSAMXG00000020350 ENSAMXG00000039251 ppm1na (ENSAMXG00000020349) Electric eel MODERN SPECIES 178 SLC7A1 (ENSEEEG00000019694) GBE1 (ENSEEEG00000019730) cadm2b (ENSEEEG00000019889) ENSEEEG00000019901 bach1a (ENSEEEG00000019903) zgc:162193 (ENSEEEG00000019905) MIPEP (ENSEEEG00000019918) tnfrsf19 (ENSEEEG00000020404) ENSEEEG00000020406 ENSEEEG00000020409 ENSEEEG00000020411 sgcg (ENSEEEG00000020412) ENSEEEG00000020416 trappc4 (ENSEEEG00000020417) slc37a4a (ENSEEEG00000020423) calm3a (ENSEEEG00000020432) ##22 PTGIR (ENSEEEG00000020570) ENSEEEG00000020572 ENSEEEG00000020573 rtn2a (ENSEEEG00000020574) rhoub (ENSEEEG00000020575) rab4b (ENSEEEG00000020576) ap2s1 (ENSEEEG00000020640) ENSEEEG00000020646 Channel catfish MODERN SPECIES 8 ENSIPUG00000021321 SLC7A1 (ENSIPUG00000021333) gbe1 (ENSIPUG00000021373) cadm2 (ENSIPUG00000021420) ENSIPUG00000021450 ENSIPUG00000021461 ENSIPUG00000021466 ENSIPUG00000021486 mipep (ENSIPUG00000021503) tnfrsf19 (ENSIPUG00000021592) sacs (ENSIPUG00000021608) sgcg (ENSIPUG00000021623) trappc4 (ENSIPUG00000021653) slc37a4 (ENSIPUG00000021638) ENSIPUG00000021674 CALM (ENSIPUG00000021682) ##22 PTGIR (ENSIPUG00000021710) ENSIPUG00000021714 ppm1na (ENSIPUG00000021724) rtn2a (ENSIPUG00000021737) Rhou (ENSIPUG00000023082) rab4b (ENSIPUG00000023086) ap2s1 (ENSIPUG00000023106) arhgap35 (ENSIPUG00000023110) ENSIPUG00000023117 tmem160 (ENSIPUG00000023123) ENSIPUG00000023129 PITPNA (ENSIPUG00000023132) slc43a2 (ENSIPUG00000023155) ENSIPUG00000023166 MYO1C (ENSIPUG00000023174) Cyprinoidei ANCESTRAL SPECIES 106 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00990000210146 ENSGT01030000234618.D ENSGT00940000157792 ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000158923.f ENSGT00940000167916 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 77 ENSGT00990000205057.a.a ENSGT00940000164751.a.a ENSGT00500000044890.a.b.c ENSGT00390000010352.e ENSGT00940000156875.a.b ENSGT00940000158099.c ENSGT00940000154730.b.b ENSGT01030000234566.e.b.b.a.i.b ENSGT01030000234618.D ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b ENSGT00940000157792.k ENSGT00390000016695.t ENSGT00940000159187.d ENSGT00730000111086.a ENSGT00940000157960.j ENSGT00950000182980.a.b.b.a.b.b.a.a ##22 ENSGT01050000244902.b.d.c ENSGT00940000164695.a.i ENSGT00940000167260.b ENSGT00940000165900.f ENSGT00940000159399.b ENSGT00970000193421.A.z ENSGT01030000234635.a.b.a.b.b.a.b.e.a ENSGT00940000161295.cb ENSGT00390000012863.a ENSGT00940000160655.fb.b.a ENSGT00940000153259.a.a.b.e ENSGT00950000183171.B.x.b ENSGT00940000158923.f.a.a ENSGT00940000167916.b.b ENSGT00940000158923.f.b Cyprininae_a ANCESTRAL SPECIES 92 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.b ENSGT00940000164751.a.a ENSGT00500000044890.a.b.c ENSGT00390000010352.e ENSGT00940000156875.a.b ENSGT00940000158099.c ENSGT00940000154730.b.b ENSGT01030000234566.e.b.b.a.i.b ENSGT01030000234618.D.a ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b ENSGT00940000157792.k ENSGT00390000016695.t ENSGT00940000159187.d ENSGT00730000111086.a ENSGT00940000157960.j ENSGT00950000182980.a.b.b.a.b.b.a.a ##22 ENSGT01050000244902.b.d.c ENSGT00940000164695.a.i ENSGT00940000167260.b ENSGT00940000165900.f ENSGT00940000159399.b ENSGT00970000193421.A.z ENSGT01030000234635.a.b.a.b.b.a.b.e.a ENSGT00940000161295.cb ENSGT00390000012863.a ENSGT00940000160655.fb.b.a ENSGT00940000153259.a.a.b.e ENSGT00950000183171.B.x.b ENSGT00940000158923.f.b ENSGT00940000155947.a.c ENSGT00390000017040.n.b Common carp reference MODERN SPECIES 26 guca1c (ENSCCRG00000061004) ENSCCRG00000070939 ENSCCRG00000030724 rab30 (ENSCCRG00000081230) prcp (ENSCCRG00000022911) FAM181B (ENSCCRG00000024241) tenm4 (ENSCCRG00000025212) nars2 (ENSCCRG00000081751) ENSCCRG00000052500 GAB2 (ENSCCRG00000077537) ENSCCRG00000073630 sgcg (ENSCCRG00000081030) ENSCCRG00000025092 slc37a4a (ENSCCRG00000025085) ENSCCRG00000074284 calm3a (ENSCCRG00000077426) ##22 ENSCCRG00000044563 ppm1na (ENSCCRG00000016244) rtn2a (ENSCCRG00000016248) rhoub (ENSCCRG00000016251) rab4b (ENSCCRG00000016263) ap2s1 (ENSCCRG00000016318) ARHGAP35 (ENSCCRG00000067045) NPAS1 (ENSCCRG00000049191) tmem160 (ENSCCRG00000080603) ENSCCRG00000029313 tnfrsf19 (ENSCCRG00000029306) ENSCCRG00000063070 bach1a (ENSCCRG00000042110) ENSCCRG00000074872 cadm2b (ENSCCRG00000001774) Goldfish MODERN SPECIES 6 ndufc2 (ENSCARG00000040229) rab30 (ENSCARG00000040213) prcp (ENSCARG00000040151) ENSCARG00000040114 FAM181B (ENSCARG00000040109) ENSCARG00000040099 tenm4 (ENSCARG00000036674) nars2 (ENSCARG00000061831) ENSCARG00000061816 GAB2 (ENSCARG00000061806) SACS (ENSCARG00000061790) sgcg (ENSCARG00000061753) ENSCARG00000061750 slc37a4a (ENSCARG00000061723) ENSCARG00000061709 calm3a (ENSCARG00000061657) ##22 PTGIR (ENSCARG00000061645) ppm1na (ENSCARG00000061639) rtn2a (ENSCARG00000061609) rhoub (ENSCARG00000061608) rab4b (ENSCARG00000061561) ap2s1 (ENSCARG00000061326) ARHGAP35 (ENSCARG00000061274) NPAS1 (ENSCARG00000061204) tmem160 (ENSCARG00000061174) ENSCARG00000061139 tnfrsf19 (ENSCARG00000061108) ENSCARG00000060939 ENSCARG00000060916 ENSCARG00000060898 cadm2b (ENSCARG00000060168) Cyprininae ANCESTRAL SPECIES 340 ENSGT01100000263484.C.a.f ENSGT00940000153997.b.a.b.c.a.b ENSGT00940000164751.a.b ENSGT00500000044890.a.b.d ENSGT00390000010352.f ENSGT00940000156875.a.a ENSGT00940000158099.d ENSGT00980000198746 ENSGT00940000154730.b.a.b ENSGT01030000234566.e.b.b.a.i.a ENSGT00940000157792.l ENSGT00390000016695.s ENSGT00940000159187.c ENSGT00940000153761.B ENSGT00730000111086.b ENSGT00950000182980.a.b.b.a.b.b.a.b ##22 ENSGT01050000244902.b.d.d ENSGT00940000167255 ENSGT00940000164695.a.j ENSGT00940000167260.a ENSGT00940000165900.e ENSGT00940000159399.a ENSGT00970000193421.A.y ENSGT01030000234635.a.b.a.b.b.a.b.e.b ENSGT00940000161295.db ENSGT00390000012863.b ENSGT00940000160655.fb.b.b Cyprininae_a ANCESTRAL SPECIES 153 ENSGT01100000263484.C.a.f ENSGT00940000153997.b.a.b.c.a.b ENSGT00940000164751.a.b ENSGT00500000044890.a.b.d ENSGT00940000156875.a.a ENSGT00940000158099.d ENSGT00980000198746 ENSGT01030000234566.e.b.b.a.i.a ENSGT00990000210146 ENSGT01030000234618.D.b ENSGT00940000157792.l ENSGT00390000016695.s ENSGT00940000159187.c ENSGT00940000153761.B ENSGT00730000111086.b ENSGT00950000182980.a.b.b.a.b.b.a.b ##22 ENSGT01050000244902.b.d.d ENSGT00940000167255 ENSGT00940000164695.a.j ENSGT00940000167260.a ENSGT00940000165900.e ENSGT00940000159399.a ENSGT00970000193421.A.y ENSGT01030000234635.a.b.a.b.b.a.b.e.b ENSGT00390000012863.b ENSGT00940000160655.fb.a ENSGT00940000153259.a.a.b.f ENSGT00950000183171.B.x.a ENSGT00940000158923.f.a.b ENSGT00940000155947.a.d ENSGT00390000017040.n.a Common carp reference MODERN SPECIES 39 MLNR (ENSCCRG00000065188) zgc:153184 (ENSCCRG00000022894) guca1c (ENSCCRG00000022897) ENSCCRG00000059568 rab30 (ENSCCRG00000022904) prcp (ENSCCRG00000077399) ENSCCRG00000022932 tenm4 (ENSCCRG00000052510) ENSCCRG00000079602 nars2 (ENSCCRG00000058508) GAB2 (ENSCCRG00000025102) ENSCCRG00000068170 sgcg (ENSCCRG00000025095) trappc4 (ENSCCRG00000048708) slc37a4a (ENSCCRG00000048695) calm3a (ENSCCRG00000017811) ##22 ENSCCRG00000074361 ENSCCRG00000035232 ppm1na (ENSCCRG00000074336) rtn2a (ENSCCRG00000035237) rhoub (ENSCCRG00000035240) rab4b (ENSCCRG00000065295) ap2s1 (ENSCCRG00000082233) ENSCCRG00000071465 tmem160 (ENSCCRG00000070899) ENSCCRG00000002499 tnfrsf19 (ENSCCRG00000033192) ENSCCRG00000033211 ENSCCRG00000033193 cadm2b (ENSCCRG00000033042) ENSCCRG00000061767 Golden-line barbel MODERN SPECIES 788 zgc:153184 (ENSSGRG00000044194) ENSSGRG00000044193 ENSSGRG00000044192 guca1c (ENSSGRG00000044191) ENSSGRG00000044183 rab30 (ENSSGRG00000044180) prcp (ENSSGRG00000044178) tenm4 (ENSSGRG00000044177) ENSSGRG00000044171 nars2 (ENSSGRG00000044165) GAB2 (ENSSGRG00000044163) SACS (ENSSGRG00000044160) sgcg (ENSSGRG00000044157) trappc4 (ENSSGRG00000044135) slc37a4a (ENSSGRG00000044041) calm3a (ENSSGRG00000043909) ##22 PTGIR (ENSSGRG00000043902) Goldfish MODERN SPECIES 34 WSCD1 (ENSCARG00000054577) ENSCARG00000054590 ENSCARG00000054601 ENSCARG00000054625 nlk2 (ENSCARG00000054638) ENSCARG00000054791 nos2b (ENSCARG00000054887) ENSCARG00000060236 msi2b (ENSCARG00000060280) tenm4 (ENSCARG00000060411) ENSCARG00000061613 GAB2 (ENSCARG00000061619) sgcg (ENSCARG00000061671) trappc4 (ENSCARG00000061749) slc37a4a (ENSCARG00000061823) calm3a (ENSCARG00000061836) ##22 PTGIR (ENSCARG00000061886) ENSCARG00000061894 ppm1na (ENSCARG00000061911) rtn2a (ENSCARG00000061932) rhoub (ENSCARG00000061958) rab4b (ENSCARG00000061971) ENSCARG00000062033 ap2s1 (ENSCARG00000062039) ARHGAP35 (ENSCARG00000062124) NPAS1 (ENSCARG00000062140) tmem160 (ENSCARG00000062186) ENSCARG00000062213 timd4 (ENSCARG00000062260) trmt9b (ENSCARG00000062269) PDS5B (ENSCARG00000062370) Zebrafish MODERN SPECIES 6 slc1a5 (ENSDARG00000099186) ndufc2 (ENSDARG00000102115) ENSDARG00000105124 rab30 (ENSDARG00000037884) prcp (ENSDARG00000037883) tenm4 (ENSDARG00000105088) ENSDARG00000103424 nars2 (ENSDARG00000098441) GAB2 (ENSDARG00000105120) ENSDARG00000116297 SACS (ENSDARG00000091042) sgcg (ENSDARG00000038107) trappc4 (ENSDARG00000027418) slc37a4a (ENSDARG00000038106) ENSDARG00000097085 calm3a (ENSDARG00000100825) ##22 PTGIR (ENSDARG00000038278) ENSDARG00000057504 ppm1na (ENSDARG00000010231) rtn2a (ENSDARG00000016088) rhoub (ENSDARG00000012968) rab4b (ENSDARG00000012177) ap2s1 (ENSDARG00000026967) ARHGAP35 (ENSDARG00000062577) npas1 (ENSDARG00000015876) tmem160 (ENSDARG00000069649) EGLN2 (ENSDARG00000062562) ENSDARG00000087835 tnfrsf19 (ENSDARG00000041869) MIPEP (ENSDARG00000055344) bach1a (ENSDARG00000062553) Clupeiformes ANCESTRAL SPECIES 18 ENSGT00940000161428 ENSGT00390000016213 ENSGT00390000004396.g ENSGT00870000136506 ENSGT00940000156709.d ENSGT01100000263476.D ENSGT00550000075103 ENSGT00530000064165.a.c ENSGT00940000159437.d ENSGT00390000015815.h ENSGT00390000012589 ENSGT00950000183000.c.a.a.f ENSGT00390000013762.a.e ENSGT00510000048151.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.a ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000164137.b ENSGT00940000167292.b ENSGT01030000234620.a.b.b.a.j ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00390000007071 ENSGT00390000018613.b ENSGT01100000263497.B ENSGT00390000011639.p Denticle herring MODERN SPECIES 16 ppme1 (ENSDCDG00000009820) sms (ENSDCDG00000009704) CNKSR2 (ENSDCDG00000009585) ENSDCDG00000009514 mrps12 (ENSDCDG00000009506) ENSDCDG00000009499 efemp2b (ENSDCDG00000008823) fibpb (ENSDCDG00000008798) tmem223 (ENSDCDG00000008795) CFL1 (ENSDCDG00000008793) ENSDCDG00000008791 gig2j (ENSDCDG00000008786) TMEM151A (ENSDCDG00000008784) ENSDCDG00000008777 slc3a2b (ENSDCDG00000008770) calm3a (ENSDCDG00000008238) ##22 ENSDCDG00000008162 pcxa (ENSDCDG00000005492) fkbp2 (ENSDCDG00000005467) ppp1r14ba (ENSDCDG00000005466) slc8a4a (ENSDCDG00000005464) ENSDCDG00000005463 ENSDCDG00000005461 PPP2R5B (ENSDCDG00000003884) zgc:77262 (ENSDCDG00000003825) MARK2 (ENSDCDG00000002435) ENSDCDG00000002368 ENSDCDG00000002367 SART1 (ENSDCDG00000002303) banf1 (ENSDCDG00000002291) gng3 (ENSDCDG00000002288) Otomorpha ANCESTRAL SPECIES 43 ENSGT00390000015415 ENSGT00950000182924.A.a ENSGT00940000165127.b ENSGT00940000165739 ENSGT00390000005498 ENSGT00390000013762.a.f ENSGT00510000048151.a ENSGT00940000154790.a.b ENSGT00940000160125 ENSGT00940000156646.c ENSGT00940000160303.a.a ENSGT00900000141164.r.b ENSGT00900000141164.q.b ENSGT00940000165651.b ENSGT00940000166331 ENSGT00950000182980.a.b.b.a.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000160539 ENSGT00940000164137.a ENSGT00550000074832 ENSGT00940000159032 ENSGT00390000017284.a.b.c ENSGT00510000047418 ENSGT00940000155980.A ENSGT00390000005656 ENSGT00940000159592 ENSGT00960000187089 ENSGT00390000007726.b Otophysi ANCESTRAL SPECIES 161 ENSGT00940000153404.b ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000159709 ENSGT00980000199058 ENSGT00940000153648.b ENSGT00900000141164.q.b ENSGT00940000165651.b ENSGT00940000166331 ENSGT00950000182980.a.b.b.a.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000160539 ENSGT00940000164137.a ENSGT00550000074832 ENSGT00940000159032 ENSGT00390000017284.a.b.c ENSGT00510000047418 ENSGT00940000155980.A ENSGT00390000005656 ENSGT00940000159592 Characiphysae ANCESTRAL SPECIES 12 ENSGT00940000153768.b ENSGT00940000164917 ENSGT00940000156996.f.a.a ENSGT00390000004124.i ENSGT00390000015553.a.a.a ENSGT01060000250599 ENSGT00940000160310.b ENSGT00940000160341 ENSGT00390000018173 ENSGT00390000007539.b ENSGT00390000006166.a ENSGT00390000011639.p ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00940000164137.b ENSGT00940000167292.b ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 Channel catfish MODERN SPECIES 9 zgc:110540 (ENSIPUG00000020729) CD248 (ENSIPUG00000020741) adssl (ENSIPUG00000020746) ENSIPUG00000020762 stx5al (ENSIPUG00000020779) RD3 (ENSIPUG00000020792) KCNK4 (ENSIPUG00000020797) esrra (ENSIPUG00000020822) prdx5 (ENSIPUG00000020839) ENSIPUG00000020856 plvapa (ENSIPUG00000020871) bscl2 (ENSIPUG00000020878) Gng3 (ENSIPUG00000020882) banf1 (ENSIPUG00000020886) slc3a2b (ENSIPUG00000020895) CALM (ENSIPUG00000020901) ##22 pcxa (ENSIPUG00000020912) ENSIPUG00000020978 fkbp2 (ENSIPUG00000020986) ppp1r14b (ENSIPUG00000021008) slc8a4a (ENSIPUG00000021015) bad (ENSIPUG00000021026) zgc:110782 (ENSIPUG00000021030) zgc:77262 (ENSIPUG00000021035) MARK2 (ENSIPUG00000021052) ENSIPUG00000021104 ENSIPUG00000021112 sart1 (ENSIPUG00000021117) hif1al2 (ENSIPUG00000021158) dpp3 (ENSIPUG00000021182) ENSIPUG00000021234 Characiphysae_b ANCESTRAL SPECIES 6 ENSGT00940000153768.b ENSGT00940000164917 ENSGT00940000156996.f.a.a ENSGT00390000004124.i ENSGT00390000015553.a.a.a ENSGT01060000250599 ENSGT00940000160310.b ENSGT00940000160341 ENSGT00390000018173 ENSGT00390000007539.b ENSGT00390000006166.a ENSGT00390000011639.p ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00940000164137.b ENSGT00940000167292.b ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00390000007071 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 Electric eel MODERN SPECIES 473 bscl2 (ENSEEEG00000003655) gng3 (ENSEEEG00000003654) banf1 (ENSEEEG00000003653) slc3a2b (ENSEEEG00000003651) calm3b (ENSEEEG00000003649) ##22 ENSEEEG00000003646 pcxa (ENSEEEG00000002240) fkbp2 (ENSEEEG00000002208) ppp1r14ba (ENSEEEG00000002207) slc8a4a (ENSEEEG00000002204) ENSEEEG00000002202 zgc:110782 (ENSEEEG00000002201) zgc:77262 (ENSEEEG00000002200) MARK2 (ENSEEEG00000002135) ENSEEEG00000002130 ENSEEEG00000002129 SART1 (ENSEEEG00000002033) hif1al2 (ENSEEEG00000002026) dpp3 (ENSEEEG00000002020) ENSEEEG00000002010 Characoidei ANCESTRAL SPECIES 17 ENSGT00940000164917 ENSGT00390000009272.`b ENSGT00940000156996.f.a.a ENSGT00390000004124.i ENSGT00390000015553.a.a.a ENSGT01060000250599 ENSGT00940000160310.b ENSGT00940000160341 ENSGT00390000018173 ENSGT00390000007539.b ENSGT00390000006166.a ENSGT00390000011639.p ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d.c ENSGT00950000182980.a.b.b.a.b.b.b ##22 ENSGT00900000141164.q.a Red-bellied piranha MODERN SPECIES 1005 ENSPNAG00000019479 calm3b (ENSPNAG00000019489) ##22 pcxa (ENSPNAG00000019555) Mexicana tetra MODERN SPECIES 5 PFDN2 (ENSAMXG00000041965) ENSAMXG00000025174 ENSAMXG00000039989 adssl (ENSAMXG00000007379) ENSAMXG00000033286 stx5al (ENSAMXG00000036629) KCNK4 (ENSAMXG00000007370) esrra (ENSAMXG00000039194) prdx5 (ENSAMXG00000033793) ENSAMXG00000042571 plvapa (ENSAMXG00000007356) bscl2 (ENSAMXG00000007350) gng3 (ENSAMXG00000016865) banf1 (ENSAMXG00000042870) slc3a2b (ENSAMXG00000007338) calm3b (ENSAMXG00000033287) ##22 ENSAMXG00000031416 ENSAMXG00000030315 ENSAMXG00000034188 ENSAMXG00000037986 ENSAMXG00000029280 dipk1b (ENSAMXG00000030250) agpat2 (ENSAMXG00000030286) egfl7 (ENSAMXG00000037257) ENSAMXG00000033430 ENSAMXG00000039059 AP3B1 (ENSAMXG00000041586) tbca (ENSAMXG00000038893) otpa (ENSAMXG00000005573) wdr41 (ENSAMXG00000019497) PDE8B (ENSAMXG00000019516) Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00940000163328.d ENSGT00940000153768.b ENSGT00940000164917 ENSGT00940000156996.f.a.a ENSGT00390000015553.a.a.a.i ENSGT00940000166453.a ENSGT00940000160310.b ENSGT00940000161051.a.b ENSGT00940000160341 ENSGT00390000018173 ENSGT00390000007539.b ENSGT00390000011639.p ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.b.a ##22 ENSGT00900000141164.r.a.a ENSGT00950000182980.a.b.b.a.b.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000164137.b ENSGT00940000167292.b ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b Cyprininae ANCESTRAL SPECIES 387 ENSGT00940000156646.d.e ENSGT00950000182980.a.b.b.a.b.b.b.a ##22 ENSGT00900000141164.q.a.d ENSGT00940000165651.a.b ENSGT00940000157074.a ENSGT00950000182985.b.b.sc.l.b.a ENSGT00940000164137.b.d ENSGT00940000167292.b.a ENSGT00940000164485.b.d ENSGT00940000155031.a.b.a ENSGT00940000166053.a.b ENSGT00940000164878.b.a ENSGT00940000166053.b ENSGT00940000164878.b.b ENSGT00390000007071.k ENSGT00940000156774.hb.b ENSGT00390000007335.g Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 874 slc3a2b (ENSCARG00000067273) ENSCARG00000067284 ##22 ENSCARG00000067300 Goldfish MODERN SPECIES 2712 bscl2 (ENSCARG00000060485) ENSCARG00000060500 ##22 gng3 (ENSCARG00000060559) banf1 (ENSCARG00000060587) slc3a2b (ENSCARG00000060611) Goldfish MODERN SPECIES 40 npdc1a (ENSCARG00000068930) pou5f3 (ENSCARG00000068936) fut7 (ENSCARG00000068941) clic3 (ENSCARG00000068945) ENSCARG00000068980 ENSCARG00000069124 zgc:113162 (ENSCARG00000069135) ENSCARG00000069155 snrpd3l (ENSCARG00000069191) ADORA2A (ENSCARG00000069196) SPECC1L (ENSCARG00000069202) setb (ENSCARG00000069217) dync2i2 (ENSCARG00000069228) ENSCARG00000069238 ENSCARG00000069243 ENSCARG00000069250 ##22 pcxa (ENSCARG00000069279) ENSCARG00000069396 fkbp2 (ENSCARG00000069404) ppp1r14ba (ENSCARG00000069405) slc8a4a (ENSCARG00000069409) ENSCARG00000069411 zgc:77262 (ENSCARG00000069414) MARK2 (ENSCARG00000069430) ENSCARG00000069470 ENSCARG00000069471 SART1 (ENSCARG00000069480) hif1al2 (ENSCARG00000069520) dpp3 (ENSCARG00000069533) ENSCARG00000069574 rbm14a (ENSCARG00000069577) Cyprininae_a ANCESTRAL SPECIES 375 ENSGT00940000153768.b.z ENSGT00940000164917.a ENSGT00940000156996.f.a.a.a ENSGT00390000015553.a.a.a.i.a ENSGT00940000166453.a.b ENSGT01000000214440.C.ab.a.a ENSGT00390000002089.a.a.b.g.a ENSGT00940000160310.b.f ENSGT00940000161051.a.b ENSGT00940000154856.A.b.q ENSGT00940000160341.f ENSGT00390000018173.u ENSGT00390000007539.b.b ENSGT00390000011639.p.b ENSGT00940000156646.d.e ENSGT00950000182980.a.b.b.a.b.b.b.a ##22 ENSGT00940000165651.a.b ENSGT00900000141164.q.a.d ENSGT00940000165651.a.a ENSGT00940000157074.b ENSGT00950000182985.b.b.sc.l.b.b Common carp reference MODERN SPECIES 38 eif4ebp3 (ENSCCRG00000056398) ankhd1 (ENSCCRG00000029016) zgc:110540 (ENSCCRG00000017753) ENSCCRG00000053246 adssl (ENSCCRG00000054606) ENSCCRG00000077653 stx5al (ENSCCRG00000054804) ENSCCRG00000080196 KCNK4 (ENSCCRG00000073335) ENSCCRG00000008488 esrra (ENSCCRG00000008491) prdx5 (ENSCCRG00000078763) ENSCCRG00000009549 bscl2 (ENSCCRG00000009485) slc3a2b (ENSCCRG00000041196) ENSCCRG00000059413 ##22 ENSCCRG00000015891 pcxa (ENSCCRG00000065063) fkbp2 (ENSCCRG00000079569) ppp1r14ba (ENSCCRG00000053362) ENSCCRG00000060235 slc8a4a (ENSCCRG00000075675) zgc:77262 (ENSCCRG00000077341) ENSCCRG00000073928 ENSCCRG00000048954 sart1 (ENSCCRG00000048957) hif1al2 (ENSCCRG00000012066) dpp3 (ENSCCRG00000017853) ENSCCRG00000072703 rbm14a (ENSCCRG00000010472) actn3a (ENSCCRG00000012217) Golden-line barbel MODERN SPECIES 682 ENSSGRG00000037226 ankhd1 (ENSSGRG00000036380) zgc:110540 (ENSSGRG00000036356) ENSSGRG00000036355 adssl (ENSSGRG00000035750) stx5al (ENSSGRG00000035736) ENSSGRG00000035735 KCNK4 (ENSSGRG00000035734) ENSSGRG00000035731 esrra (ENSSGRG00000035728) prdx5 (ENSSGRG00000035727) ENSSGRG00000035032 bscl2 (ENSSGRG00000035022) gng3 (ENSSGRG00000035016) ENSSGRG00000035013 ENSSGRG00000035012 ##22 ENSSGRG00000035010 pcxa (ENSSGRG00000034967) Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00940000164917 ENSGT00940000156996.f.a.a ENSGT00390000015553.a.a.a.i ENSGT00940000166453.a ENSGT00940000160310.b ENSGT00940000161051.a.b ENSGT00940000160341 ENSGT00390000018173 ENSGT00390000007539.b ENSGT00390000011639.p ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.b.a ##22 ENSGT00900000141164.r.a.a ENSGT00950000182980.a.b.b.a.b.b.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000164137.b ENSGT00940000167292.b ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h Cyprininae ANCESTRAL SPECIES 93 ENSGT00940000166453.a.a ENSGT01000000214440.C.ab.a.b ENSGT00390000002089.a.a.b.g.b ENSGT00940000160310.b.e ENSGT00940000154856.A.b.r.a.a ENSGT00940000160341.e ENSGT00390000018173.v ENSGT00390000007539.b.a ENSGT00390000011639.p.a ENSGT00390000018173.u ENSGT00390000007539.b.b ENSGT00390000011639.p.b ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d.f ENSGT00950000182980.a.b.b.a.b.b.b.b ##22 ENSGT00900000141164.q.a.c ENSGT00940000165651.a.a ENSGT00940000157074.b ENSGT00950000182985.b.b.sc.l.b.b ENSGT00940000164137.b.c ENSGT00940000167292.b.b Cyprininae_a ANCESTRAL SPECIES 33 ENSGT00940000156996.f.a.a.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00390000015553.a.a.a.i.b ENSGT00940000166453.a.a ENSGT01000000214440.C.ab.a.b ENSGT00940000160310.b.e ENSGT00940000154856.A.b.r.a.a ENSGT00940000160341.e ENSGT00390000018173.v ENSGT00390000007539.b.a ENSGT00390000011639.p.a ENSGT01100000263497.B ENSGT00390000018613.b ENSGT00940000156646.d.f ENSGT00950000182980.a.b.b.a.b.b.b.b ##22 ENSGT00900000141164.q.a.c ENSGT00940000157074.a.a ENSGT00950000182985.b.b.sc.l.b.a ENSGT00940000164137.b.d ENSGT00940000167292.b.a ENSGT00940000164485.b.d ENSGT00940000155031.a.b.a ENSGT00940000166053.a.b ENSGT00940000164878.b.a ENSGT00390000007071.k ENSGT00940000156774.hb.b ENSGT00390000007335.g ENSGT00940000165459.a.a.b.b ENSGT00940000157436.b.c.a ENSGT00940000153968.a.b.b.b.i.b Golden-line barbel MODERN SPECIES 343 ENSSGRG00000052106 adssl (ENSSGRG00000052116) ENSSGRG00000052340 ENSSGRG00000052341 stx5al (ENSSGRG00000052343) KCNK4 (ENSSGRG00000052362) ENSSGRG00000052363 esrra (ENSSGRG00000052364) prdx5 (ENSSGRG00000052369) ENSSGRG00000052376 bscl2 (ENSSGRG00000052589) gng3 (ENSSGRG00000052592) gng3 (ENSSGRG00000052594) banf1 (ENSSGRG00000052596) slc3a2b (ENSSGRG00000052598) calm3b (ENSSGRG00000052599) ##22 pcxa (ENSSGRG00000052608) ENSSGRG00000052707 fkbp2 (ENSSGRG00000052708) ppp1r14ba (ENSSGRG00000052710) Common carp reference MODERN SPECIES 45 gria1b (ENSCCRG00000033197) eif4ebp3 (ENSCCRG00000073976) tmsb (ENSCCRG00000027442) ankhd1 (ENSCCRG00000030297) ENSCCRG00000062096 ENSCCRG00000050347 adssl (ENSCCRG00000060886) ENSCCRG00000050390 KCNK4 (ENSCCRG00000059727) ENSCCRG00000009097 esrra (ENSCCRG00000009082) prdx5 (ENSCCRG00000063106) ENSCCRG00000005277 bscl2 (ENSCCRG00000005231) slc3a2b (ENSCCRG00000004566) calm3b (ENSCCRG00000068956) ##22 pcxa (ENSCCRG00000073074) ENSCCRG00000005438 fkbp2 (ENSCCRG00000062041) ppp1r14ba (ENSCCRG00000000066) slc8a4a (ENSCCRG00000065632) ENSCCRG00000081806 ENSCCRG00000048953 zgc:110782 (ENSCCRG00000076033) zgc:77262 (ENSCCRG00000072891) ENSCCRG00000045427 ENSCCRG00000012132 ENSCCRG00000059092 ENSCCRG00000012120 hif1al2 (ENSCCRG00000076777) dpp3 (ENSCCRG00000010502) Goldfish MODERN SPECIES 13 zgc:110540 (ENSCARG00000050849) ENSCARG00000050843 adssl (ENSCARG00000050630) ENSCARG00000030681 stx5al (ENSCARG00000030641) ENSCARG00000030629 KCNK4 (ENSCARG00000030605) ENSCARG00000030601 esrra (ENSCARG00000030597) prdx5 (ENSCARG00000030588) ENSCARG00000029159 bscl2 (ENSCARG00000029098) gng3 (ENSCARG00000029089) banf1 (ENSCARG00000029084) slc3a2b (ENSCARG00000029080) calm3b (ENSCARG00000029070) ##22 ENSCARG00000029065 pcxa (ENSCARG00000027044) fkbp2 (ENSCARG00000026899) ppp1r14ba (ENSCARG00000026888) slc8a4a (ENSCARG00000026856) ENSCARG00000026831 zgc:110782 (ENSCARG00000026827) zgc:77262 (ENSCARG00000026822) MARK2 (ENSCARG00000024167) ENSCARG00000024103 ENSCARG00000024102 sart1 (ENSCARG00000024039) hif1al2 (ENSCARG00000024005) dpp3 (ENSCARG00000023765) ENSCARG00000023727 Zebrafish MODERN SPECIES 13 ankhd1 (ENSDARG00000077860) zgc:110540 (ENSDARG00000054929) ENSDARG00000077938 ENSDARG00000088207 adssl (ENSDARG00000012399) ENSDARG00000092480 stx5al (ENSDARG00000003175) ENSDARG00000044534 esrra (ENSDARG00000069266) prdx5 (ENSDARG00000055064) ENSDARG00000055076 bscl2 (ENSDARG00000037008) gng3 (ENSDARG00000009553) banf1 (ENSDARG00000037009) slc3a2b (ENSDARG00000037012) calm3b (ENSDARG00000074057) ##22 pcxa (ENSDARG00000098766) ENSDARG00000055132 fkbp2 (ENSDARG00000044540) ppp1r14ba (ENSDARG00000044541) slc8a4a (ENSDARG00000055154) ENSDARG00000087993 zgc:110782 (ENSDARG00000044544) zgc:77262 (ENSDARG00000044545) MARK2 (ENSDARG00000079905) ENSDARG00000078317 ENSDARG00000088601 sart1 (ENSDARG00000005945) hif1al2 (ENSDARG00000044550) dpp3 (ENSDARG00000020676) ENSDARG00000079095 Euteleosteomorpha ANCESTRAL SPECIES 205 ENSGT00550000075103 ENSGT00530000064165.a.c ENSGT00940000159437.d ENSGT00390000015815.h ENSGT00390000013762.a.e ENSGT00510000048151.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000164137.b ENSGT00940000167292.b ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007071 ENSGT00390000018613.b ENSGT01100000263497.B ENSGT00390000011639.p Acanthomorphata ANCESTRAL SPECIES 563 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.a.b ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00970000195560 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00970000195560 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Tiger tail seahorse MODERN SPECIES 357 si:ch211-160d20.3 (ENSHCOG00000000252) ttc9b (ENSHCOG00000007422) MAP3K10 (ENSHCOG00000007405) SIPA1L3 (ENSHCOG00000007347) rrm1 (ENSHCOG00000007337) qpctla (ENSHCOG00000007323) six5 (ENSHCOG00000007315) tbcb (ENSHCOG00000000238) clptm1 (ENSHCOG00000000707) ENSHCOG00000007270 mrpl28 (ENSHCOG00000000219) ppp1r37 (ENSHCOG00000007120) ENSHCOG00000007061 bmp16 (ENSHCOG00000007049) gemin7 (ENSHCOG00000007043) calm3a (ENSHCOG00000007031) ##22 PTGIR (ENSHCOG00000007014) ENSHCOG00000007004 ppm1na (ENSHCOG00000006994) rtn2a (ENSHCOG00000006977) rhoub (ENSHCOG00000006961) rab4b (ENSHCOG00000000208) ap2s1 (ENSHCOG00000006931) ENSHCOG00000006914 ENSHCOG00000006895 NPAS1 (ENSHCOG00000006869) tmem160 (ENSHCOG00000006792) ENSHCOG00000006766 slc1a5 (ENSHCOG00000006722) fkrp (ENSHCOG00000006696) STRN4 (ENSHCOG00000006683) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Mangrove rivulus MODERN SPECIES 79 SIPA1L3 (ENSKMAG00000021136) rrm1 (ENSKMAG00000021216) qpctla (ENSKMAG00000021237) six9 (ENSKMAG00000021242) ##34 six5 (ENSKMAG00000021248) tbcb (ENSKMAG00000021257) clptm1 (ENSKMAG00000021262) ENSKMAG00000021271 mrpl28 (ENSKMAG00000021277) ENSKMAG00000021287 ppp1r37 (ENSKMAG00000021296) ENSKMAG00000021310 bmp16 (ENSKMAG00000021322) gemin7 (ENSKMAG00000021331) ENSKMAG00000021341 ENSKMAG00000021362 ##22 PTGIR (ENSKMAG00000021374) ENSKMAG00000021377 ppm1na (ENSKMAG00000021386) ENSKMAG00000021390 rtn2a (ENSKMAG00000021396) Turquoise killifish MODERN SPECIES 1615 SIPA1L3 (ENSNFUG00015009516) RRM1 (ENSNFUG00015009581) qpctla (ENSNFUG00015009609) six9 (ENSNFUG00015009685) ##34 SIX4.3 (ENSNFUG00015009713) tbcb (ENSNFUG00015009726) clptm1 (ENSNFUG00015009826) ENSNFUG00015009970 mrpl28 (ENSNFUG00015010032) PPP1R37 (ENSNFUG00015010055) ENSNFUG00015010100 ENSNFUG00015010123 Nfu_g_1_000575 (ENSNFUG00015010130) ENSNFUG00015010136 GEMIN7 (ENSNFUG00015010141) Nfu_g_1_007837 (ENSNFUG00015010167) ##22 PTGIR (ENSNFUG00015010329) PPM1NA (ENSNFUG00015010383) RTN2A (ENSNFUG00015010661) RHOUB (ENSNFUG00015010667) rab4b (ENSNFUG00015010688) AP2S1 (ENSNFUG00015010718) ARHGAP35 (ENSNFUG00015010752) NPAS1 (ENSNFUG00015010764) TMEM160 (ENSNFUG00015010791) EGLN2 (ENSNFUG00015010796) SLC1A5 (ENSNFUG00015010810) FKRP (ENSNFUG00015010839) STRN4 (ENSNFUG00015010940) PRKD2 (ENSNFUG00015012719) GPR132 (ENSNFUG00015013881) Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Poeciliinae ANCESTRAL SPECIES 14 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Poecilia ANCESTRAL SPECIES 2 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b NAME_6 ANCESTRAL SPECIES 75 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00740000115816.A ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900.a ENSGT00940000165900.b ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Sailfin molly MODERN SPECIES 1476 ENSPLAG00000004555 ##22 PTGIR (ENSPLAG00000004560) ENSPLAG00000004566 ppm1na (ENSPLAG00000004580) ENSPLAG00000004612 rhoub (ENSPLAG00000004627) Amazon molly MODERN SPECIES 283 SIPA1L3 (ENSPFOG00000009920) rrm1 (ENSPFOG00000009903) qpctla (ENSPFOG00000009835) six9 (ENSPFOG00000009821) ##34 six5 (ENSPFOG00000009796) tbcb (ENSPFOG00000009743) clptm1 (ENSPFOG00000009570) ENSPFOG00000022538 mrpl28 (ENSPFOG00000009485) ENSPFOG00000009466 ppp1r37 (ENSPFOG00000009326) bmp16 (ENSPFOG00000009315) gemin7 (ENSPFOG00000009309) ENSPFOG00000022404 ENSPFOG00000024002 ENSPFOG00000009278 ##22 PTGIR (ENSPFOG00000009272) ENSPFOG00000024064 ppm1na (ENSPFOG00000009223) rtn2a (ENSPFOG00000009216) rhoub (ENSPFOG00000009174) rhoub (ENSPFOG00000009162) rab4b (ENSPFOG00000009095) ap2s1 (ENSPFOG00000009059) ENSPFOG00000008993 NPAS1 (ENSPFOG00000008940) tmem160 (ENSPFOG00000008919) ENSPFOG00000008899 slc1a5 (ENSPFOG00000008751) fkrp (ENSPFOG00000020376) STRN4 (ENSPFOG00000008538) Guppy MODERN SPECIES 443 ttc9b (ENSPREG00000000778) MAP3K10 (ENSPREG00000000770) SIPA1L3 (ENSPREG00000000759) rrm1 (ENSPREG00000000731) qpctla (ENSPREG00000000703) six9 (ENSPREG00000000683) ##34 six5 (ENSPREG00000000679) tbcb (ENSPREG00000000640) clptm1 (ENSPREG00000000569) ENSPREG00000000561 mrpl28 (ENSPREG00000022968) ppp1r37 (ENSPREG00000022961) ENSPREG00000022956 bmp16 (ENSPREG00000022947) gemin7 (ENSPREG00000022938) calm3a (ENSPREG00000022928) ##22 PTGIR (ENSPREG00000022925) ENSPREG00000022919 ppm1na (ENSPREG00000022913) ENSPREG00000022893 rhoub (ENSPREG00000022882) rab4b (ENSPREG00000022875) ap2s1 (ENSPREG00000022869) ENSPREG00000022858 NPAS1 (ENSPREG00000022851) tmem160 (ENSPREG00000022844) ENSPREG00000022839 slc1a5 (ENSPREG00000022822) fkrp (ENSPREG00000022804) STRN4 (ENSPREG00000022797) PRKD2 (ENSPREG00000022776) Platyfish MODERN SPECIES 9 MAP3K10 (ENSXMAG00000018686) SIPA1L3 (ENSXMAG00000021118) rrm1 (ENSXMAG00000004335) qpctla (ENSXMAG00000004319) six9 (ENSXMAG00000004316) ##34 six5 (ENSXMAG00000025473) tbcb (ENSXMAG00000004309) clptm1 (ENSXMAG00000004298) ENSXMAG00000004297 mrpl28 (ENSXMAG00000004293) ENSXMAG00000026593 ppp1r37 (ENSXMAG00000020834) ENSXMAG00000019557 bmp16 (ENSXMAG00000026621) gemin7 (ENSXMAG00000019556) calm3b (ENSXMAG00000004263) ##22 PTGIR (ENSXMAG00000025943) ENSXMAG00000023012 ppm1na (ENSXMAG00000001773) rtn2a (ENSXMAG00000022638) rhoub (ENSXMAG00000022375) rab4b (ENSXMAG00000004238) ap2s1 (ENSXMAG00000004235) ENSXMAG00000004221 NPAS1 (ENSXMAG00000028521) tmem160 (ENSXMAG00000004210) EGLN2 (ENSXMAG00000028470) slc1a5 (ENSXMAG00000004179) fkrp (ENSXMAG00000004177) STRN4 (ENSXMAG00000004130) PRKD2 (ENSXMAG00000004089) NAME_4 ANCESTRAL SPECIES 82 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Sheepshead minnow MODERN SPECIES 579 calm3b (ENSCVAG00000020476) ##22 PTGIR (ENSCVAG00000020463) ppm1na (ENSCVAG00000020455) ENSCVAG00000020452 rtn2a (ENSCVAG00000020443) rhoub (ENSCVAG00000020417) rab4b (ENSCVAG00000020399) ap2s1 (ENSCVAG00000020380) ENSCVAG00000020349 NPAS1 (ENSCVAG00000020326) tmem160 (ENSCVAG00000020290) EGLN2 (ENSCVAG00000020270) Oryzias ANCESTRAL SPECIES 8 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295.s ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.x ENSGT00950000183024.a.b.b Oryzias_b ANCESTRAL SPECIES 14 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295.s ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.x ENSGT00950000183024.a.b.b Indian medaka MODERN SPECIES 12 ttc9b (ENSOMEG00000013281) MAP3K10 (ENSOMEG00000013309) SIPA1L3 (ENSOMEG00000013380) rrm1 (ENSOMEG00000013415) qpctla (ENSOMEG00000013429) six9 (ENSOMEG00000013448) ##34 six5 (ENSOMEG00000013459) tbcb (ENSOMEG00000013486) clptm1 (ENSOMEG00000013516) ENSOMEG00000013536 mrpl28 (ENSOMEG00000013553) ENSOMEG00000013567 ppp1r37 (ENSOMEG00000013594) ENSOMEG00000013642 bmp16 (ENSOMEG00000013665) calm3a (ENSOMEG00000013695) ##22 PTGIR (ENSOMEG00000013711) ENSOMEG00000013732 ppm1na (ENSOMEG00000013743) rtn2a (ENSOMEG00000000735) rhoub (ENSOMEG00000013845) rab4b (ENSOMEG00000013881) ap2s1 (ENSOMEG00000000353) ARHGAP35 (ENSOMEG00000013962) NPAS1 (ENSOMEG00000013988) tmem160 (ENSOMEG00000014008) EGLN2 (ENSOMEG00000014031) slc1a5 (ENSOMEG00000014071) fkrp (ENSOMEG00000014092) STRN4 (ENSOMEG00000014165) PRKD2 (ENSOMEG00000014217) Javanese ricefish MODERN SPECIES 4 MAP3K10 (ENSOJAG00000003506) SIPA1L3 (ENSOJAG00000003375) rrm1 (ENSOJAG00000003362) qpctla (ENSOJAG00000003352) six9 (ENSOJAG00000003343) ##34 six5 (ENSOJAG00000003337) tbcb (ENSOJAG00000003330) clptm1 (ENSOJAG00000003041) ENSOJAG00000002987 mrpl28 (ENSOJAG00000002974) ENSOJAG00000002968 ppp1r37 (ENSOJAG00000002937) ENSOJAG00000002927 bmp16 (ENSOJAG00000002922) gemin7 (ENSOJAG00000002917) ENSOJAG00000002765 ##22 PTGIR (ENSOJAG00000002721) ENSOJAG00000002717 ppm1na (ENSOJAG00000002711) rtn2a (ENSOJAG00000002700) rhoub (ENSOJAG00000002693) rab4b (ENSOJAG00000002672) ap2s1 (ENSOJAG00000002643) ARHGAP35 (ENSOJAG00000002635) NPAS1 (ENSOJAG00000002620) tmem160 (ENSOJAG00000002613) EGLN2 (ENSOJAG00000002604) slc1a5 (ENSOJAG00000002585) fkrp (ENSOJAG00000002572) STRN4 (ENSOJAG00000002540) PRKD2 (ENSOJAG00000001882) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295.s ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.x ENSGT00950000183024.a.b.b Japanese Medaka HdrR MODERN SPECIES 4 ENSORLG00000006721 ENSORLG00000006731 qpctla (ENSORLG00000006752) six9 (ENSORLG00000006757) ##34 six5 (ENSORLG00000006762) tbcb (ENSORLG00000006774) clptm1 (ENSORLG00000006781) ENSORLG00000029281 ENSORLG00000006786 mrpl28 (ENSORLG00000006806) ENSORLG00000006812 ppp1r37 (ENSORLG00000006817) ENSORLG00000006822 bmp16 (ENSORLG00000028570) gemin7 (ENSORLG00000006826) ENSORLG00000006842 ##22 PTGIR (ENSORLG00000006848) ENSORLG00000006854 ppm1na (ENSORLG00000006866) rtn2a (ENSORLG00000027944) rhoub (ENSORLG00000024468) rab4b (ENSORLG00000006902) ap2s1 (ENSORLG00000006912) ENSORLG00000022767 ENSORLG00000006927 NPAS1 (ENSORLG00000006935) tmem160 (ENSORLG00000006946) ENSORLG00000006962 ENSORLG00000013757 slc1a5 (ENSORLG00000007018) fkrp (ENSORLG00000007025) Chinese medaka MODERN SPECIES 925 ENSOSIG00000008894 SIPA1L3 (ENSOSIG00000008864) rrm1 (ENSOSIG00000008860) qpctla (ENSOSIG00000008857) six9 (ENSOSIG00000008855) ##34 six5 (ENSOSIG00000008854) tbcb (ENSOSIG00000008853) clptm1 (ENSOSIG00000007940) ENSOSIG00000007928 mrpl28 (ENSOSIG00000007927) ENSOSIG00000007924 ppp1r37 (ENSOSIG00000007921) ENSOSIG00000007915 bmp16 (ENSOSIG00000007914) gemin7 (ENSOSIG00000007912) calm3b (ENSOSIG00000007750) ##22 PTGIR (ENSOSIG00000007743) ENSOSIG00000007740 ENSOSIG00000007736 ppm1na (ENSOSIG00000007732) rtn2a (ENSOSIG00000007725) rhoub (ENSOSIG00000007721) rab4b (ENSOSIG00000007645) ap2s1 (ENSOSIG00000007633) ENSOSIG00000007628 ENSOSIG00000007624 NPAS1 (ENSOSIG00000007621) tmem160 (ENSOSIG00000007617) EGLN2 (ENSOSIG00000007615) slc1a5 (ENSOSIG00000007614) fkrp (ENSOSIG00000007613) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Cichlidae ANCESTRAL SPECIES 25 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Nile tilapia MODERN SPECIES 5 FUT4 (ENSONIG00000020639) cux1b (ENSONIG00000003797) SH2B2 (ENSONIG00000003802) dnajc30b (ENSONIG00000041035) bud23 (ENSONIG00000003804) STX1A (ENSONIG00000003808) ENSONIG00000003818 ENSONIG00000030880 ENSONIG00000032366 mrpl28 (ENSONIG00000005965) ENSONIG00000030433 ppp1r37 (ENSONIG00000005960) ENSONIG00000005959 bmp16 (ENSONIG00000036110) ENSONIG00000035108 ENSONIG00000032840 ##22 PTGIR (ENSONIG00000005975) ENSONIG00000005976 ppm1na (ENSONIG00000005977) rtn2a (ENSONIG00000041725) rhoub (ENSONIG00000033189) rab4b (ENSONIG00000005987) ap2s1 (ENSONIG00000030333) ENSONIG00000005995 NPAS1 (ENSONIG00000036145) tmem160 (ENSONIG00000041394) EGLN2 (ENSONIG00000006001) slc1a5 (ENSONIG00000006006) fkrp (ENSONIG00000020469) STRN4 (ENSONIG00000006015) PRKD2 (ENSONIG00000006021) Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00940000159751 ENSGT00940000163742 ENSGT00950000183191.a.b ENSGT00510000048685.g.a ENSGT00390000014737 ENSGT01030000234627.a.a.c ENSGT00940000162428.g.b ENSGT00940000162428.g.a ENSGT00990000203749 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Lyretail cichlid MODERN SPECIES 327 FUT4 (ENSNBRG00000004813) cux1b (ENSNBRG00000004825) ENSNBRG00000004847 SH2B2 (ENSNBRG00000004866) dnajc30b (ENSNBRG00000004964) bud23 (ENSNBRG00000004990) STX1A (ENSNBRG00000005189) ENSNBRG00000005247 ENSNBRG00000005360 ENSNBRG00000005366 gemin7 (ENSNBRG00000005377) bmp16 (ENSNBRG00000005399) ENSNBRG00000005415 ppp1r37 (ENSNBRG00000005527) mrpl28 (ENSNBRG00000005544) ENSNBRG00000005576 ##22 PTGIR (ENSNBRG00000005586) ENSNBRG00000005603 ppm1na (ENSNBRG00000005618) ENSNBRG00000005646 rtn2a (ENSNBRG00000005652) rhoub (ENSNBRG00000005685) rab4b (ENSNBRG00000005698) ap2s1 (ENSNBRG00000005730) ARHGAP35 (ENSNBRG00000005754) NPAS1 (ENSNBRG00000005778) tmem160 (ENSNBRG00000005848) EGLN2 (ENSNBRG00000005857) slc1a5 (ENSNBRG00000005904) fkrp (ENSNBRG00000006122) STRN4 (ENSNBRG00000006138) Haplochromini ANCESTRAL SPECIES 15 ENSGT00940000159751 ENSGT00940000163742 ENSGT00950000183191.a.b ENSGT00510000048685.g.a ENSGT00390000014737 ENSGT01030000234627.a.a.c ENSGT00940000162428.g.b ENSGT00940000162428.g.a ENSGT00990000203749 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Burton s mouthbrooder MODERN SPECIES 281 ENSHBUG00000019364 ##22 PTGIR (ENSHBUG00000019321) rtn2a (ENSHBUG00000019300) ppm1na (ENSHBUG00000019216) rhoub (ENSHBUG00000019211) rab4b (ENSHBUG00000019191) ap2s1 (ENSHBUG00000019141) ENSHBUG00000019114 NPAS1 (ENSHBUG00000019089) tmem160 (ENSHBUG00000019078) EGLN2 (ENSHBUG00000019071) slc1a5 (ENSHBUG00000019048) fkrp (ENSHBUG00000019015) STRN4 (ENSHBUG00000019003) PRKD2 (ENSHBUG00000018974) gpr184 (ENSHBUG00000018782) Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00940000159751 ENSGT00940000163742 ENSGT00950000183191.a.b ENSGT00510000048685.g.a ENSGT00390000014737 ENSGT01030000234627.a.a.c ENSGT00940000162428.g.b ENSGT00940000162428.g.a ENSGT00990000203749 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b P. nyererei MODERN SPECIES 298 si:dkey-81h8.1 (ENSPNYG00000019651) ilf2 (ENSPNYG00000019624) pex11b (ENSPNYG00000019616) smad10a (ENSPNYG00000019437) snapin (ENSPNYG00000019394) chtopa (ENSPNYG00000019370) txnipa (ENSPNYG00000019323) gatad2b (ENSPNYG00000019289) eepd1 (ENSPNYG00000019255) ENSPNYG00000019224 arl4ab (ENSPNYG00000019193) scin (ENSPNYG00000019143) thsd7aa (ENSPNYG00000019031) ENSPNYG00000018981 nxph1 (ENSPNYG00000018970) ENSPNYG00000018960 ##22 PTGIR (ENSPNYG00000018955) ppm1na (ENSPNYG00000018942) ENSPNYG00000018934 rtn2a (ENSPNYG00000018916) rhoub (ENSPNYG00000018907) rab4b (ENSPNYG00000018884) ap2s1 (ENSPNYG00000018856) ENSPNYG00000018831 NPAS1 (ENSPNYG00000018818) tmem160 (ENSPNYG00000018807) ENSPNYG00000018789 slc1a5 (ENSPNYG00000018765) fkrp (ENSPNYG00000018753) STRN4 (ENSPNYG00000018681) PRKD2 (ENSPNYG00000018590) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000159751 ENSGT00940000163742 ENSGT00950000183191.a.b ENSGT00510000048685.g.a ENSGT00390000014737 ENSGT01030000234627.a.a.c ENSGT00940000162428.g.b ENSGT00940000162428.g.a ENSGT00990000203749 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Zebra mbuna MODERN SPECIES 1096 SH2B2 (ENSMZEG00005016571) dnajc30b (ENSMZEG00005016565) bud23 (ENSMZEG00005016548) ENSMZEG00005016537 mrpl28 (ENSMZEG00005016524) ENSMZEG00005016513 ppp1r37 (ENSMZEG00005016488) ENSMZEG00005016479 bmp16 (ENSMZEG00005016468) gemin7 (ENSMZEG00005016459) ENSMZEG00005016457 ENSMZEG00005016451 ENSMZEG00005016444 ENSMZEG00005016437 dpcd (ENSMZEG00005016422) ENSMZEG00005016410 ##22 PTGIR (ENSMZEG00005016402) ppm1na (ENSMZEG00005016391) ENSMZEG00005016388 rtn2a (ENSMZEG00005016385) rhoub (ENSMZEG00005016378) rab4b (ENSMZEG00005016373) ap2s1 (ENSMZEG00005016368) ARHGAP35 (ENSMZEG00005016358) NPAS1 (ENSMZEG00005016333) tmem160 (ENSMZEG00005016316) EGLN2 (ENSMZEG00005016309) slc1a5 (ENSMZEG00005016302) fkrp (ENSMZEG00005016301) STRN4 (ENSMZEG00005016296) PRKD2 (ENSMZEG00005016268) Eastern happy MODERN SPECIES 5 SH2B2 (ENSACLG00000016927) dnajc30b (ENSACLG00000016979) bud23 (ENSACLG00000016987) STX1A (ENSACLG00000017056) ENSACLG00000017079 ENSACLG00000017123 ENSACLG00000017145 gemin7 (ENSACLG00000017160) bmp16 (ENSACLG00000017170) ENSACLG00000017247 ppp1r37 (ENSACLG00000017303) ENSACLG00000017369 mrpl28 (ENSACLG00000017376) ENSACLG00000017402 ENSACLG00000017412 ENSACLG00000017450 ##22 PTGIR (ENSACLG00000017460) rtn2a (ENSACLG00000017475) ppm1na (ENSACLG00000017560) rhoub (ENSACLG00000017582) rab4b (ENSACLG00000017589) ap2s1 (ENSACLG00000017617) ARHGAP35 (ENSACLG00000017654) NPAS1 (ENSACLG00000017707) tmem160 (ENSACLG00000017722) EGLN2 (ENSACLG00000017731) slc1a5 (ENSACLG00000017764) fkrp (ENSACLG00000017782) STRN4 (ENSACLG00000017792) PRKD2 (ENSACLG00000017889) gpr184 (ENSACLG00000018018) Midas cichlid MODERN SPECIES 1164 calm3b (ENSACIG00000019598) ##22 PTGIR (ENSACIG00000019614) ENSACIG00000019624 ppm1na (ENSACIG00000019638) ENSACIG00000019652 rtn2a (ENSACIG00000019660) rhoub (ENSACIG00000019675) rab4b (ENSACIG00000019697) ap2s1 (ENSACIG00000019718) ENSACIG00000019733 NPAS1 (ENSACIG00000019758) tmem160 (ENSACIG00000000180) ENSACIG00000000269 slc1a5 (ENSACIG00000000293) fkrp (ENSACIG00000000309) STRN4 (ENSACIG00000000332) Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295.q ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295.q ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Amphiprion ANCESTRAL SPECIES 6 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295.q ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Orange clownfish MODERN SPECIES 23 ENSAPEG00000010409 ENSAPEG00000010427 zgc:174895 (ENSAPEG00000010474) rab34a (ENSAPEG00000010503) tlcd1 (ENSAPEG00000010552) DHRS11 (ENSAPEG00000010562) YWHAG (ENSAPEG00000010597) camkk1b (ENSAPEG00000010616) mrpl28 (ENSAPEG00000010705) ENSAPEG00000010737 ppp1r37 (ENSAPEG00000010771) ENSAPEG00000010782 bmp16 (ENSAPEG00000010826) gemin7 (ENSAPEG00000010856) ENSAPEG00000010879 calm3a (ENSAPEG00000010897) ##22 PTGIR (ENSAPEG00000010934) ENSAPEG00000010941 ppm1na (ENSAPEG00000010976) ENSAPEG00000011018 rtn2a (ENSAPEG00000011030) rhoub (ENSAPEG00000011089) ENSAPEG00000011109 rab4b (ENSAPEG00000011130) ap2s1 (ENSAPEG00000011184) ARHGAP35 (ENSAPEG00000011195) NPAS1 (ENSAPEG00000011225) tmem160 (ENSAPEG00000011303) ENSAPEG00000011316 slc1a5 (ENSAPEG00000011336) fkrp (ENSAPEG00000011378) Clown anemonefish MODERN SPECIES 2169 ENSAOCG00000012115 calm3a (ENSAOCG00000012060) ##22 PTGIR (ENSAOCG00000012040) ENSAOCG00000012023 ppm1na (ENSAOCG00000012010) ENSAOCG00000011917 rtn2a (ENSAOCG00000011904) Spiny chromis MODERN SPECIES 48 SIPA1L3 (ENSAPOG00000016721) rrm1 (ENSAPOG00000016739) qpctla (ENSAPOG00000016752) six9 (ENSAPOG00000016776) ##34 six5 (ENSAPOG00000016780) tbcb (ENSAPOG00000016810) clptm1 (ENSAPOG00000016825) ENSAPOG00000016851 mrpl28 (ENSAPOG00000016883) ENSAPOG00000000460 ppp1r37 (ENSAPOG00000016897) ENSAPOG00000016927 bmp16 (ENSAPOG00000016950) gemin7 (ENSAPOG00000016954) ENSAPOG00000016975 calm3a (ENSAPOG00000016996) ##22 PTGIR (ENSAPOG00000000955) ENSAPOG00000017041 ppm1na (ENSAPOG00000017178) rtn2a (ENSAPOG00000017202) rhoub (ENSAPOG00000017216) rab4b (ENSAPOG00000017258) ap2s1 (ENSAPOG00000017271) ARHGAP35 (ENSAPOG00000017295) NPAS1 (ENSAPOG00000017306) tmem160 (ENSAPOG00000017335) ENSAPOG00000017357 Bicolor damselfish MODERN SPECIES 1637 gemin7 (ENSSPAG00000019464) ENSSPAG00000019425 ENSSPAG00000019411 ##22 PTGIR (ENSSPAG00000019403) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Carangaria ANCESTRAL SPECIES 8 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Turbot MODERN SPECIES 15 ENSSMAG00000013747 ENSSMAG00000013788 ENSSMAG00000013821 qpctla (ENSSMAG00000013839) six5 (ENSSMAG00000013852) tbcb (ENSSMAG00000013857) clptm1 (ENSSMAG00000013869) ENSSMAG00000013895 mrpl28 (ENSSMAG00000013912) ENSSMAG00000013935 ppp1r37 (ENSSMAG00000013943) ENSSMAG00000013968 bmp16 (ENSSMAG00000014001) gemin7 (ENSSMAG00000014017) ENSSMAG00000032057 calm3a (ENSSMAG00000034840) ##22 ENSSMAG00000014044 ENSSMAG00000023018 ENSSMAG00000014108 ppm1na (ENSSMAG00000014095) rhoub (ENSSMAG00000035260) rab4b (ENSSMAG00000014221) ap2s1 (ENSSMAG00000014249) ARHGAP35 (ENSSMAG00000014276) NPAS1 (ENSSMAG00000014307) tmem160 (ENSSMAG00000014348) ENSSMAG00000014356 slc1a5 (ENSSMAG00000014367) fkrp (ENSSMAG00000014389) STRN4 (ENSSMAG00000014394) PRKD2 (ENSSMAG00000014413) Tongue sole MODERN SPECIES 14 vtna (ENSCSEG00000007841) SCARF1 (ENSCSEG00000007859) ENSCSEG00000007880 prpf8 (ENSCSEG00000007905) six5 (ENSCSEG00000008012) tbcb (ENSCSEG00000008024) clptm1 (ENSCSEG00000008044) ENSCSEG00000008061 mrpl28 (ENSCSEG00000008095) ENSCSEG00000008107 ppp1r37 (ENSCSEG00000008118) ENSCSEG00000008130 bmp16 (ENSCSEG00000008137) gemin7 (ENSCSEG00000008152) ENSCSEG00000008160 calm3a (ENSCSEG00000008164) ##22 PTGIR (ENSCSEG00000008173) ENSCSEG00000008188 ppm1na (ENSCSEG00000008195) rtn2a (ENSCSEG00000008206) rhoub (ENSCSEG00000008236) rab4b (ENSCSEG00000008253) ap2s1 (ENSCSEG00000008268) ARHGAP35 (ENSCSEG00000008279) ENSCSEG00000008286 NPAS1 (ENSCSEG00000008295) tmem160 (ENSCSEG00000008300) ENSCSEG00000008308 slc1a5 (ENSCSEG00000008312) fkrp (ENSCSEG00000008321) STRN4 (ENSCSEG00000008326) Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Barramundi perch MODERN SPECIES 316 mrpl28 (ENSLCAG00010019213) ENSLCAG00010019207 ppp1r37 (ENSLCAG00010019178) ENSLCAG00010019168 bmp16 (ENSLCAG00010019164) gemin7 (ENSLCAG00010019160) ENSLCAG00010019159 calm3a (ENSLCAG00010019063) ##22 PTGIR (ENSLCAG00010019043) ENSLCAG00010019034 ppm1na (ENSLCAG00010019028) ENSLCAG00010019017 rhoub (ENSLCAG00010019007) rab4b (ENSLCAG00010018968) ap2s1 (ENSLCAG00010018929) ARHGAP35 (ENSLCAG00010018908) NPAS1 (ENSLCAG00010018893) tmem160 (ENSLCAG00010018884) ENSLCAG00010018876 slc1a5 (ENSLCAG00010018862) fkrp (ENSLCAG00010018855) STRN4 (ENSLCAG00010018847) PRKD2 (ENSLCAG00010018759) Seriola ANCESTRAL SPECIES 62 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00970000195560 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Greater amberjack MODERN SPECIES 256 mrpl28 (ENSSDUG00000005764) ENSSDUG00000005754 ppp1r37 (ENSSDUG00000005737) ENSSDUG00000005700 bmp16 (ENSSDUG00000005681) gemin7 (ENSSDUG00000005677) ENSSDUG00000005665 calm3a (ENSSDUG00000005643) ##22 PTGIR (ENSSDUG00000005631) ENSSDUG00000005617 ppm1na (ENSSDUG00000005546) rtn2a (ENSSDUG00000005515) rhoub (ENSSDUG00000005508) rab4b (ENSSDUG00000005481) ap2s1 (ENSSDUG00000005475) ARHGAP35 (ENSSDUG00000005456) NPAS1 (ENSSDUG00000005432) tmem160 (ENSSDUG00000005406) ENSSDUG00000005372 slc1a5 (ENSSDUG00000005338) fkrp (ENSSDUG00000005327) STRN4 (ENSSDUG00000005308) PRKD2 (ENSSDUG00000005199) Yellowtail amberjack MODERN SPECIES 2765 mrpl28 (ENSSLDG00000000409) ENSSLDG00000000398 ENSSLDG00000000394 ENSSLDG00000000257 bmp16 (ENSSLDG00000000217) gemin7 (ENSSLDG00000000173) ENSSLDG00000000157 calm3a (ENSSLDG00000000103) ##22 PTGIR (ENSSLDG00000022322) ENSSLDG00000022309 ppm1na (ENSSLDG00000022294) rtn2a (ENSSLDG00000022267) rhoub (ENSSLDG00000022253) rab4b (ENSSLDG00000022231) ap2s1 (ENSSLDG00000022219) ARHGAP35 (ENSSLDG00000022208) NPAS1 (ENSSLDG00000022197) tmem160 (ENSSLDG00000022177) ENSSLDG00000022164 slc1a5 (ENSSLDG00000022155) fkrp (ENSSLDG00000022150) STRN4 (ENSSLDG00000022100) PRKD2 (ENSSLDG00000022017) Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Zig-zag eel MODERN SPECIES 4 ENSMAMG00000011570 ENSMAMG00000011563 ENSMAMG00000011554 qpctla (ENSMAMG00000011548) six9 (ENSMAMG00000027159) ##34 six5 (ENSMAMG00000011533) tbcb (ENSMAMG00000011522) clptm1 (ENSMAMG00000011513) ENSMAMG00000011497 mrpl28 (ENSMAMG00000011487) ENSMAMG00000011482 ppp1r37 (ENSMAMG00000011469) ENSMAMG00000011197 bmp16 (ENSMAMG00000011163) gemin7 (ENSMAMG00000011153) ENSMAMG00000011135 ##22 ENSMAMG00000011128 ENSMAMG00000011109 ENSMAMG00000025723 ppm1na (ENSMAMG00000011076) rtn2a (ENSMAMG00000011037) rhoub (ENSMAMG00000011031) rab4b (ENSMAMG00000011009) ap2s1 (ENSMAMG00000027708) ENSMAMG00000010943 ENSMAMG00000010860 tmem160 (ENSMAMG00000010840) ENSMAMG00000010817 slc1a5 (ENSMAMG00000010781) fkrp (ENSMAMG00000010770) STRN4 (ENSMAMG00000010765) Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Siamese fighting fish MODERN SPECIES 4 ttc9b (ENSBSLG00000005299) MAP3K10 (ENSBSLG00000005369) SIPA1L3 (ENSBSLG00000005425) rrm1 (ENSBSLG00000005518) qpctla (ENSBSLG00000005566) six9 (ENSBSLG00000005576) ##34 six5 (ENSBSLG00000005593) tbcb (ENSBSLG00000005608) clptm1 (ENSBSLG00000005653) mrpl28 (ENSBSLG00000005893) ENSBSLG00000005898 ppp1r37 (ENSBSLG00000006589) ENSBSLG00000007081 bmp16 (ENSBSLG00000007088) gemin7 (ENSBSLG00000007092) ENSBSLG00000007117 ##22 PTGIR (ENSBSLG00000007204) ENSBSLG00000007206 ppm1na (ENSBSLG00000007209) rtn2a (ENSBSLG00000007224) rhoub (ENSBSLG00000007238) gemin7 (ENSBSLG00000007242) rab4b (ENSBSLG00000007254) ap2s1 (ENSBSLG00000007305) ARHGAP35 (ENSBSLG00000007336) NPAS1 (ENSBSLG00000007346) tmem160 (ENSBSLG00000007376) ENSBSLG00000007382 slc1a5 (ENSBSLG00000007391) fkrp (ENSBSLG00000007406) STRN4 (ENSBSLG00000007435) Climbing perch MODERN SPECIES 4 ENSATEG00000013453 ENSATEG00000013302 ENSATEG00000013255 qpctla (ENSATEG00000013220) six9 (ENSATEG00000013202) ##34 six5 (ENSATEG00000013199) tbcb (ENSATEG00000013182) clptm1 (ENSATEG00000013128) ENSATEG00000013107 mrpl28 (ENSATEG00000013085) ENSATEG00000013073 ppp1r37 (ENSATEG00000013054) ENSATEG00000013043 bmp16 (ENSATEG00000013021) gemin7 (ENSATEG00000012989) ENSATEG00000012960 ##22 ENSATEG00000012953 ENSATEG00000012941 ppm1na (ENSATEG00000012925) rtn2a (ENSATEG00000026895) rhoub (ENSATEG00000026799) rab4b (ENSATEG00000012855) ap2s1 (ENSATEG00000012831) ARHGAP35 (ENSATEG00000012799) NPAS1 (ENSATEG00000012695) tmem160 (ENSATEG00000012679) ENSATEG00000012670 slc1a5 (ENSATEG00000012644) fkrp (ENSATEG00000012629) STRN4 (ENSATEG00000012485) PRKD2 (ENSATEG00000012391) Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Tetraodon MODERN SPECIES 8 si:ch211-160d20.3 (ENSTNIG00000007736) ttc9b (ENSTNIG00000007737) MAP3K10 (ENSTNIG00000007738) SIPA1L3 (ENSTNIG00000007739) rrm1 (ENSTNIG00000007740) qpctla (ENSTNIG00000007741) six5 (ENSTNIG00000007742) tbcb (ENSTNIG00000007743) clptm1 (ENSTNIG00000007744) RELB (ENSTNIG00000007745) mrpl28 (ENSTNIG00000007746) ENSTNIG00000000961 ppp1r37 (ENSTNIG00000007747) ENSTNIG00000007748 bmp16 (ENSTNIG00000007749) calm3b (ENSTNIG00000007750) ##22 PTGIR (ENSTNIG00000001391) ppm1na (ENSTNIG00000007751) rtn2a (ENSTNIG00000000564) rhoub (ENSTNIG00000007752) rab4b (ENSTNIG00000007753) ap2s1 (ENSTNIG00000007754) ENSTNIG00000007755 NPAS1 (ENSTNIG00000007756) tmem160 (ENSTNIG00000007757) EGLN2 (ENSTNIG00000007758) slc1a5 (ENSTNIG00000000523) slc1a5 (ENSTNIG00000007759) slc1a5 (ENSTNIG00000007760) fkrp (ENSTNIG00000007761) STRN4 (ENSTNIG00000007762) Fugu MODERN SPECIES 2 ENSTRUG00000010051 fosb (ENSTRUG00000010593) ttc9b (ENSTRUG00000010808) MAP3K10 (ENSTRUG00000010858) SIPA1L3 (ENSTRUG00000011034) six5 (ENSTRUG00000011163) tbcb (ENSTRUG00000011197) clptm1 (ENSTRUG00000011269) ENSTRUG00000011348 mrpl28 (ENSTRUG00000019877) ppp1r37 (ENSTRUG00000019606) ENSTRUG00000011465 bmp16 (ENSTRUG00000011486) gemin7 (ENSTRUG00000011620) ENSTRUG00000028429 calm3b (ENSTRUG00000021268) ##22 PTGIR (ENSTRUG00000011708) ENSTRUG00000011761 ppm1na (ENSTRUG00000011812) rtn2 (ENSTRUG00000011895) rhoub (ENSTRUG00000033432) rab4b (ENSTRUG00000012010) ap2s1 (ENSTRUG00000012134) ENSTRUG00000012205 NPAS1 (ENSTRUG00000012318) tmem160 (ENSTRUG00000021260) ENSTRUG00000021179 slc1a5 (ENSTRUG00000012427) fkrp (ENSTRUG00000012773) PRKD2 (ENSTRUG00000012916) gpr184 (ENSTRUG00000013068) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Ballan wrasse MODERN SPECIES 383 ENSLBEG00000026503 ##22 PTGIR (ENSLBEG00000026490) ENSLBEG00000026461 ppm1na (ENSLBEG00000026427) rtn2a (ENSLBEG00000026400) rhoub (ENSLBEG00000026384) SYNRG (ENSLBEG00000026280) dusp14 (ENSLBEG00000026215) tada2a (ENSLBEG00000026167) traf4a (ENSLBEG00000026134) nek8 (ENSLBEG00000026072) tlcd1 (ENSLBEG00000026036) rab34a (ENSLBEG00000026006) zgc:174895 (ENSLBEG00000025988) ENSLBEG00000025970 ca4b (ENSLBEG00000025934) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000160518 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Gilthead seabream MODERN SPECIES 11 rrm1 (ENSSAUG00010013384) qpctla (ENSSAUG00010013389) six9 (ENSSAUG00010013391) ##34 six5 (ENSSAUG00010013392) tbcb (ENSSAUG00010013393) clptm1 (ENSSAUG00010013398) ENSSAUG00010013594 mrpl28 (ENSSAUG00010013627) ENSSAUG00010013629 ENSSAUG00010013630 ppp1r37 (ENSSAUG00010013635) ENSSAUG00010013745 bmp16 (ENSSAUG00010013747) gemin7 (ENSSAUG00010013748) ENSSAUG00010013752 calm3a (ENSSAUG00010013755) ##22 PTGIR (ENSSAUG00010013890) ENSSAUG00010013893 ppm1na (ENSSAUG00010013895) rtn2a (ENSSAUG00010013899) rhoub (ENSSAUG00010013901) rab4b (ENSSAUG00010013905) ap2s1 (ENSSAUG00010013923) ARHGAP35 (ENSSAUG00010014039) NPAS1 (ENSSAUG00010014044) ENSSAUG00010014047 tmem160 (ENSSAUG00010014050) ENSSAUG00010014055 slc1a5 (ENSSAUG00010014062) fkrp (ENSSAUG00010014067) STRN4 (ENSSAUG00010014073) Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b European seabass MODERN SPECIES 3 ENSDLAG00005000951 ENSDLAG00005000900 ENSDLAG00005000877 six9 (ENSDLAG00005000868) ##34 ENSDLAG00005030159 ENSDLAG00005029683 clptm1 (ENSDLAG00005000842) ENSDLAG00005000830 mrpl28 (ENSDLAG00005000825) ENSDLAG00005000818 ppp1r37 (ENSDLAG00005000772) ENSDLAG00005000758 bmp16 (ENSDLAG00005000755) gemin7 (ENSDLAG00005000753) ENSDLAG00005000747 calm3a (ENSDLAG00005000735) ##22 ENSDLAG00005000729 ENSDLAG00005000727 ppm1na (ENSDLAG00005027240) rtn2a (ENSDLAG00005000721) rhoub (ENSDLAG00005000718) rab4b (ENSDLAG00005000714) ap2s1 (ENSDLAG00005030226) ARHGAP35 (ENSDLAG00005000707) ENSDLAG00005027965 ENSDLAG00005000698 tmem160 (ENSDLAG00005035128) slc1a5 (ENSDLAG00005030735) fkrp (ENSDLAG00005000689) STRN4 (ENSDLAG00005000469) PRKD2 (ENSDLAG00005029851) Large yellow croaker MODERN SPECIES 479 SIPA1L3 (ENSLCRG00005003625) rrm1 (ENSLCRG00005003624) qpctla (ENSLCRG00005003621) six9 (ENSLCRG00005003617) ##34 six5 (ENSLCRG00005003615) tbcb (ENSLCRG00005003612) clptm1 (ENSLCRG00005002992) ENSLCRG00005002970 mrpl28 (ENSLCRG00005002966) ENSLCRG00005002964 ppp1r37 (ENSLCRG00005002828) ENSLCRG00005002809 bmp16 (ENSLCRG00005002805) gemin7 (ENSLCRG00005002804) ENSLCRG00005002799 calm3a (ENSLCRG00005002706) ##22 PTGIR (ENSLCRG00005002699) ENSLCRG00005002691 ENSLCRG00005002688 ppm1na (ENSLCRG00005002684) rtn2a (ENSLCRG00005002680) rhoub (ENSLCRG00005002675) rab4b (ENSLCRG00005002663) ap2s1 (ENSLCRG00005002386) ARHGAP35 (ENSLCRG00005002362) NPAS1 (ENSLCRG00005002351) ENSLCRG00005002346 tmem160 (ENSLCRG00005015005) ENSLCRG00005015002 slc1a5 (ENSLCRG00005014999) fkrp (ENSLCRG00005014997) Perciformes ANCESTRAL SPECIES 10 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Lumpfish MODERN SPECIES 4 ENSCLMG00005015757 ENSCLMG00005015756 RRM1 (ENSCLMG00005015755) qpctla (ENSCLMG00005015754) six9 (ENSCLMG00005015753) ##34 six5 (ENSCLMG00005015752) tbcb (ENSCLMG00005015750) clptm1 (ENSCLMG00005015548) ENSCLMG00005015546 mrpl28 (ENSCLMG00005015544) ppp1r37 (ENSCLMG00005015351) ENSCLMG00005015349 bmp16 (ENSCLMG00005015348) gemin7 (ENSCLMG00005015347) ENSCLMG00005015346 calm3a (ENSCLMG00005015297) ##22 PTGIR (ENSCLMG00005015296) ENSCLMG00005015295 ppm1na (ENSCLMG00005015264) rtn2a (ENSCLMG00005015244) rhoub (ENSCLMG00005015243) rab4b (ENSCLMG00005015242) ap2s1 (ENSCLMG00005015240) ENSCLMG00005015236 NPAS1 (ENSCLMG00005015233) tmem160 (ENSCLMG00005015230) ENSCLMG00005015228 slc1a5 (ENSCLMG00005015226) fkrp (ENSCLMG00005015224) STRN4 (ENSCLMG00005015102) PRKD2 (ENSCLMG00005012032) Stickleback MODERN SPECIES SIPA1L3 (ENSGACG00000009761) rrm1 (ENSGACG00000009741) qpctla (ENSGACG00000009732) six9 (ENSGACG00000009726) ##34 six5 (ENSGACG00000009721) tbcb (ENSGACG00000009693) clptm1 (ENSGACG00000009668) RELB (ENSGACG00000009656) mrpl28 (ENSGACG00000009641) ENSGACG00000009639 ppp1r37 (ENSGACG00000009629) ENSGACG00000009625 bmp16 (ENSGACG00000009621) gemin7 (ENSGACG00000009619) ENSGACG00000009610 ENSGACG00000009604 ##22 PTGIR (ENSGACG00000009600) ppm1na (ENSGACG00000009594) rtn2a (ENSGACG00000009589) rhoub (ENSGACG00000009566) rab4b (ENSGACG00000009539) ap2s1 (ENSGACG00000009507) ENSGACG00000009502 NPAS1 (ENSGACG00000009494) tmem160 (ENSGACG00000009491) EGLN2 (ENSGACG00000009469) slc1a5 (ENSGACG00000009446) fkrp (ENSGACG00000009443) STRN4 (ENSGACG00000009437) PRKD2 (ENSGACG00000009426) gpr184 (ENSGACG00000009424) Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000159183 ENSGT00910000144246.b.c.a ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000166868.b ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000177307 ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a.c ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a Channel bull blenny MODERN SPECIES 4 MAP3K10 (ENSCGOG00000009579) SIPA1L3 (ENSCGOG00000009564) rrm1 (ENSCGOG00000009549) qpctla (ENSCGOG00000009543) six9 (ENSCGOG00000009534) ##34 six5 (ENSCGOG00000009530) tbcb (ENSCGOG00000009526) clptm1 (ENSCGOG00000009254) ENSCGOG00000009248 mrpl28 (ENSCGOG00000009242) ppp1r37 (ENSCGOG00000009023) ENSCGOG00000008976 bmp16 (ENSCGOG00000008973) gemin7 (ENSCGOG00000008969) ENSCGOG00000008960 calm3a (ENSCGOG00000008787) ##22 PTGIR (ENSCGOG00000008783) ENSCGOG00000008778 ppm1na (ENSCGOG00000008707) rtn2a (ENSCGOG00000008701) rhoub (ENSCGOG00000008699) rab4b (ENSCGOG00000008647) ap2s1 (ENSCGOG00000008629) ENSCGOG00000008625 ENSCGOG00000008621 ENSCGOG00000008617 tmem160 (ENSCGOG00000008615) EGLN2 (ENSCGOG00000008610) slc1a5 (ENSCGOG00000008594) fkrp (ENSCGOG00000008592) STRN4 (ENSCGOG00000008537) Pike perch MODERN SPECIES 133 SIPA1L3 (ENSSLUG00000010903) rrm1 (ENSSLUG00000010952) qpctla (ENSSLUG00000010967) six9 (ENSSLUG00000010982) ##34 six5 (ENSSLUG00000010996) tbcb (ENSSLUG00000011003) clptm1 (ENSSLUG00000011013) RELB (ENSSLUG00000011027) mrpl28 (ENSSLUG00000011031) ENSSLUG00000011033 ppp1r37 (ENSSLUG00000011048) ENSSLUG00000011311 bmp16 (ENSSLUG00000011313) gemin7 (ENSSLUG00000011316) ENSSLUG00000011318 calm3a (ENSSLUG00000011325) ##22 PTGIR (ENSSLUG00000011390) ENSSLUG00000011393 ppm1na (ENSSLUG00000011397) ENSSLUG00000011400 rtn2a (ENSSLUG00000011403) rhoub (ENSSLUG00000011408) rab4b (ENSSLUG00000011423) ap2s1 (ENSSLUG00000011496) ENSSLUG00000011551 NPAS1 (ENSSLUG00000011556) tmem160 (ENSSLUG00000014758) ENSSLUG00000014761 slc1a5 (ENSSLUG00000014770) fkrp (ENSSLUG00000014776) STRN4 (ENSSLUG00000014785) Pinecone sodierfish MODERN SPECIES 4 si:ch211-160d20.3 (ENSMMDG00005006736) ttc9b (ENSMMDG00005006734) MAP3K10 (ENSMMDG00005006720) rrm1 (ENSMMDG00005006713) qpctla (ENSMMDG00005006712) ENSMMDG00005006711 ENSMMDG00005006709 tbcb (ENSMMDG00005006708) clptm1 (ENSMMDG00005005563) ENSMMDG00005005543 mrpl28 (ENSMMDG00005005538) ppp1r37 (ENSMMDG00005005222) bmp16 (ENSMMDG00005004472) gemin7 (ENSMMDG00005014211) ENSMMDG00005014207 calm3a (ENSMMDG00005014140) ##22 PTGIR (ENSMMDG00005014135) ENSMMDG00005014132 ppm1na (ENSMMDG00005014038) ENSMMDG00005014036 rtn2a (ENSMMDG00005014006) rhoub (ENSMMDG00005014003) rab4b (ENSMMDG00005013995) ap2s1 (ENSMMDG00005013914) ARHGAP35 (ENSMMDG00005013906) NPAS1 (ENSMMDG00005013903) tmem160 (ENSMMDG00005013900) ENSMMDG00005013899 ENSMMDG00005013898 slc1a5 (ENSMMDG00005013896) fkrp (ENSMMDG00005013893) Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 7 ENSGT00940000161494 ENSGT00940000160518 ENSGT00530000063583.a.a.b ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B ENSGT00940000160230 ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00950000182980.a.b.b.a.b.b.c ##22 ENSGT01050000244902.b.d ENSGT00940000167255 ENSGT00940000164695.a ENSGT00940000167260 ENSGT00940000165900 ENSGT00940000159399.c.b ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 228 ENSGT00940000161494.i.a ENSGT00940000161494.j ENSGT00940000160518.a ENSGT00940000159183.u.b ENSGT00390000003107.b.j.h ENSGT00940000158292.b.e ##34 ENSGT00940000166238.a ENSGT00940000156119 ENSGT00530000063461.B.b ENSGT00940000160230.m.a.b ENSGT00390000017359.l ENSGT00940000156484.a.d ENSGT00940000157454.rc.a ENSGT00940000155666.d.b ENSGT00390000018039.o ENSGT00950000182980.a.b.b.a.b.b.c.a ##22 ENSGT01050000244902.b.d.f ENSGT00940000164695.a.h ENSGT00940000167260.d ENSGT00940000165900.c ENSGT00940000159399.c.b.a Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00390000005773.c ENSGT00940000161494.i.a ENSGT00940000160518.a ENSGT00940000159183.u.b ENSGT00390000003107.b.j.h ENSGT00940000158292.b.e ##34 ENSGT00940000166238.a.c ENSGT00940000156119 ENSGT00530000063461.B.b ENSGT00940000160230.m.a.b ENSGT00390000017359.l ENSGT00940000156484.a.d ENSGT00940000157454.rc.a ENSGT00940000155666.d.b ENSGT00390000018039.o ENSGT00950000182980.a.b.b.a.b.b.c.a ##22 ENSGT01050000244902.b.d.f ENSGT00940000164695.a.h ENSGT00940000167260.d ENSGT00940000165900.c ENSGT00940000159399.c.b.a ENSGT00970000193421.A.bb ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00940000161295.n.a ENSGT00390000012863.d ENSGT00940000160655.w.a ENSGT00940000159485.i ENSGT00390000017583.f ENSGT00950000183095.a.b.a.b.a.r ENSGT00950000183024.a.b.b.j ENSGT01100000263537.b.b.c.b.h Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00940000160358.k.a ENSGT00390000005773.c ENSGT00940000161494.j.a ENSGT00940000160518.a ENSGT00940000159183.u.b ENSGT00390000003107.b.j.h ENSGT00940000158292.b.e ##34 ENSGT00940000166238.a.c ENSGT00940000156119 ENSGT00530000063461.B.b ENSGT00940000160230.m.a.b ENSGT00390000017359.l ENSGT00940000156484.a.d ENSGT00940000157454.rc.a ENSGT00940000155666.d.b ENSGT00950000182980.a.b.b.a.b.b.c.a ##22 ENSGT01050000244902.b.d.f ENSGT00940000164695.a.h ENSGT00940000167260.d ENSGT00940000165900.c ENSGT00940000159399.c.b.a ENSGT00970000193421.A.bb ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00390000012863.d ENSGT00940000160655.w.a ENSGT00940000159485.i ENSGT00390000017583.f ENSGT00950000183095.a.b.a.b.a.r ENSGT00950000183024.a.b.b.j.a ENSGT01100000263537.b.b.c.b.h ENSGT00940000162008.e.a.a Oncorhynchus_a ANCESTRAL SPECIES 41 ENSGT00940000166395.c.a.b ENSGT00940000160358.k.a ENSGT00390000005773.c ENSGT00940000161494.j.a ENSGT00940000160518.a ENSGT00940000159183.u.b ENSGT00940000158292.b.e ##34 ENSGT00940000166238.a.c ENSGT00940000156119 ENSGT00530000063461.B.b ENSGT00940000160230.m.a.b ENSGT00390000017359.l ENSGT00940000156484.a.d ENSGT00940000157454.rc.a ENSGT00940000155666.d.b ENSGT00950000182980.a.b.b.a.b.b.c.a ##22 ENSGT01050000244902.b.d.f ENSGT00940000164695.a.h ENSGT00940000167260.d ENSGT00940000165900.c ENSGT00940000159399.c.b.a ENSGT00970000193421.A.bb ENSGT00390000012863.d ENSGT00940000160655.w.a ENSGT00940000159485.i ENSGT00390000017583.f ENSGT00950000183095.a.b.a.b.a.r ENSGT00950000183024.a.b.b.j.a ENSGT01100000263537.b.b.c.b.h ENSGT00940000162008.e.a.a ENSGT01030000234872.a.a Coho salmon MODERN SPECIES 9 si:ch211-160d20.3 (ENSOKIG00005021548) ttc9b (ENSOKIG00005048353) MAP3K10 (ENSOKIG00005048350) SIPA1L3 (ENSOKIG00005048335) six9 (ENSOKIG00005048324) ##34 six5 (ENSOKIG00005048319) tbcb (ENSOKIG00005048314) clptm1 (ENSOKIG00005048128) ENSOKIG00005048109 ENSOKIG00005048105 mrpl28 (ENSOKIG00005048088) ENSOKIG00005048077 ppp1r37 (ENSOKIG00005048009) ENSOKIG00005047993 bmp16 (ENSOKIG00005047983) ENSOKIG00005047928 ##22 PTGIR (ENSOKIG00005047918) ppm1na (ENSOKIG00005047912) rtn2a (ENSOKIG00005047889) rhoub (ENSOKIG00005047880) rab4b (ENSOKIG00005047835) ap2s1 (ENSOKIG00005047804) NPAS1 (ENSOKIG00005047796) ENSOKIG00005047792 tmem160 (ENSOKIG00005047779) ENSOKIG00005047770 slc1a5 (ENSOKIG00005047738) fkrp (ENSOKIG00005047730) STRN4 (ENSOKIG00005047682) PRKD2 (ENSOKIG00005047551) gpr184 (ENSOKIG00005047525) Chinook salmon MODERN SPECIES 5 dnajc8 (ENSOTSG00005011501) ENSOTSG00005011733 ENSOTSG00005012261 ADGRB1 (ENSOTSG00005012277) HERPUD2 (ENSOTSG00005012859) ENSOTSG00005012867 SLC4A7 (ENSOTSG00005013377) eomesa (ENSOTSG00005015312) ENSOTSG00005015313 ENSOTSG00005015314 mrpl28 (ENSOTSG00005015315) ENSOTSG00005015316 ppp1r37 (ENSOTSG00005015319) bmp16 (ENSOTSG00005015323) ENSOTSG00005015326 ENSOTSG00005015328 ##22 ENSOTSG00005015521 PTGIR (ENSOTSG00005015523) ppm1na (ENSOTSG00005015525) rtn2a (ENSOTSG00005015526) rhoub (ENSOTSG00005015528) rab4b (ENSOTSG00005015530) ap2s1 (ENSOTSG00005015531) ARHGAP35 (ENSOTSG00005015557) ENSOTSG00005015559 ENSOTSG00005015560 slc1a5 (ENSOTSG00005015561) fkrp (ENSOTSG00005015562) STRN4 (ENSOTSG00005015563) PRKD2 (ENSOTSG00005015564) gpr184 (ENSOTSG00005015569) Salmo ANCESTRAL SPECIES ENSGT00950000182980.a.b.b.a.b.b.c.a ##22 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000101038 ttc9b (ENSSSAG00000005311) ENSSSAG00000093904 map3k10 (ENSSSAG00000005318) ENSSSAG00000005339 six9 (ENSSSAG00000092455) ##34 six5 (ENSSSAG00000120633) tbcb (ENSSSAG00000005371) clptm1 (ENSSSAG00000005391) relb (ENSSSAG00000052551) mrpl28 (ENSSSAG00000052408) ppp1r37 (ENSSSAG00000050748) ENSSSAG00000101396 gemin7 (ENSSSAG00000050696) ptgir (ENSSSAG00000050308) calm2a (ENSSSAG00000100630) ##22 ENSSSAG00000098660 ppm1na (ENSSSAG00000114761) rtn2 (ENSSSAG00000050238) rhoub (ENSSSAG00000093611) rab4b (ENSSSAG00000112839) AP2S1 (ENSSSAG00000049632) ARHGAP35 (ENSSSAG00000088356) NPAS1 (ENSSSAG00000052649) tmem160 (ENSSSAG00000105319) egln2 (ENSSSAG00000052632) slc1a5 (ENSSSAG00000106214) fkrp (ENSSSAG00000112023) STRN4 (ENSSSAG00000089805) ENSSSAG00000099064 PRKD2 (ENSSSAG00000002560) Huchen MODERN SPECIES 645 ENSHHUG00000041319 mrpl28 (ENSHHUG00000041331) ENSHHUG00000041348 ENSHHUG00000041349 ppp1r37 (ENSHHUG00000041350) bmp16 (ENSHHUG00000041353) gemin7 (ENSHHUG00000041427) ENSHHUG00000041429 ##22 PTGIR (ENSHHUG00000041583) ppm1na (ENSHHUG00000041586) rtn2a (ENSHHUG00000041595) rhoub (ENSHHUG00000041624) rab4b (ENSHHUG00000041633) ap2s1 (ENSHHUG00000041863) Salmoninae ANCESTRAL SPECIES 26 ENSGT00940000161494.i.b ENSGT00940000160518.b ENSGT00530000063583.a.a.b ENSGT00940000159183.u.a ENSGT00390000003107.b.j.g ENSGT00940000158292.b.f ##34 ENSGT00940000167410 ENSGT01010000224936 ENSGT00530000063461.B.a ENSGT00940000160230.m.b ENSGT00390000017359.k ENSGT00940000156484.a.c ENSGT00940000157454.rc.b ENSGT00940000155666.d.a ENSGT00390000018039.p ENSGT00950000182980.a.b.b.a.b.b.c.b ##22 ENSGT01050000244902.b.d.e ENSGT00940000167255 ENSGT00940000164695.a.g ENSGT00940000167260.c ENSGT00940000165900.d ENSGT00940000159399.c.b.b ENSGT00970000193421.A ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00940000161295.n.a ENSGT00390000012863.c ENSGT00940000160655.w.b ENSGT00940000159485.j ENSGT00390000017583.e ENSGT00950000183095.a.b.a.b.a.q Huchen MODERN SPECIES 31 ttc9b (ENSHHUG00000003130) MAP3K10 (ENSHHUG00000003138) ENSHHUG00000003419 SIPA1L3 (ENSHHUG00000003454) qpctla (ENSHHUG00000003623) six9 (ENSHHUG00000003626) ##34 ENSHHUG00000003630 ENSHHUG00000003632 clptm1 (ENSHHUG00000003638) ENSHHUG00000003796 mrpl28 (ENSHHUG00000003803) ENSHHUG00000003816 ppp1r37 (ENSHHUG00000003826) bmp16 (ENSHHUG00000003835) gemin7 (ENSHHUG00000003837) ENSHHUG00000003845 ##22 PTGIR (ENSHHUG00000004308) ENSHHUG00000004312 ppm1na (ENSHHUG00000004316) rtn2a (ENSHHUG00000004319) rhoub (ENSHHUG00000004325) rab4b (ENSHHUG00000004327) ap2s1 (ENSHHUG00000004485) ENSHHUG00000004517 ARHGAP35 (ENSHHUG00000004527) tmem160 (ENSHHUG00000004544) ENSHHUG00000004554 slc1a5 (ENSHHUG00000004571) fkrp (ENSHHUG00000004577) STRN4 (ENSHHUG00000004590) PRKD2 (ENSHHUG00000004711) Salmoninae_a ANCESTRAL SPECIES 19 ENSGT00940000160518.b ENSGT00530000063583.a.a.b ENSGT00940000159183.u.a ENSGT00390000003107.b.j.g ENSGT00940000158292.b.f ##34 ENSGT00940000166238.a.d ENSGT00940000167410 ENSGT01010000224936 ENSGT00530000063461.B.a ENSGT00940000160230.m.a.a ENSGT00390000017359.k ENSGT00940000156484.a.c ENSGT00940000157454.rc.b ENSGT00940000155666.d.a ENSGT00390000018039.p ENSGT00950000182980.a.b.b.a.b.b.c.b ##22 ENSGT01050000244902.b.d.e ENSGT00940000167255 ENSGT00940000164695.a.g ENSGT00940000167260.c ENSGT00940000165900.d ENSGT00940000159399.c.b.b ENSGT00970000193421.A.cb ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00940000161295.n.b ENSGT00940000161295.o ENSGT00390000012863.c ENSGT00940000160655.w.b ENSGT00940000159485.j ENSGT00390000017583.e ENSGT00950000183095.a.b.a.b.a.q Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00940000161494.j.b ENSGT00940000160518.b ENSGT00940000174677 ENSGT00940000159183.u.a ENSGT00390000003107.b.j.g ENSGT00940000158292.b.f ##34 ENSGT00940000166238.a.d ENSGT01010000224936 ENSGT00530000063461.B.a ENSGT00940000160230.m.a.a ENSGT00390000017359.k ENSGT00940000156484.a.c ENSGT00940000157454.rc.b ENSGT00940000155666.d.a ENSGT00390000018039.p ENSGT00950000182980.a.b.b.a.b.b.c.b ##22 ENSGT01050000244902.b.d.e ENSGT00940000167255 ENSGT00940000164695.a.g ENSGT00940000167260.c ENSGT00940000165900.d ENSGT00940000159399.c.b.b ENSGT00970000193421.A.cb ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00940000161295.n.a ENSGT00390000012863.c ENSGT00940000160655.w.b ENSGT00940000159485.j ENSGT00390000017583.e ENSGT00950000183095.a.b.a.b.a.q ENSGT00950000183024.a.b.b.i Rainbow trout MODERN SPECIES 19 ttc9b (ENSOMYG00000021609) ENSOMYG00000021615 ENSOMYG00000048634 ENSOMYG00000021727 qpctla (ENSOMYG00000021787) six9 (ENSOMYG00000021795) ##34 six5 (ENSOMYG00000021802) clptm1 (ENSOMYG00000021855) ENSOMYG00000052183 ENSOMYG00000021944 mrpl28 (ENSOMYG00000021960) ENSOMYG00000021974 ppp1r37 (ENSOMYG00000022054) bmp16 (ENSOMYG00000022166) gemin7 (ENSOMYG00000022172) ENSOMYG00000022241 ##22 ENSOMYG00000022323 ENSOMYG00000022332 ppm1na (ENSOMYG00000022344) RTN2 (ENSOMYG00000022377) rhoub (ENSOMYG00000022411) rab4b (ENSOMYG00000022476) ap2s1 (ENSOMYG00000022579) ARHGAP35 (ENSOMYG00000022615) NPAS1 (ENSOMYG00000069164) ENSOMYG00000065488 tmem160 (ENSOMYG00000022620) ENSOMYG00000022630 slc1a5 (ENSOMYG00000022652) fkrp (ENSOMYG00000022673) STRN4 (ENSOMYG00000022684) Oncorhynchus_a ANCESTRAL SPECIES 59 ENSGT00940000161494.j.b ENSGT00940000160518.b ENSGT00940000174677 ENSGT00940000159183.u.a ENSGT00390000003107.b.j.g ENSGT00940000158292.b.f ##34 ENSGT00940000166238.a.d ENSGT01010000224936 ENSGT00530000063461.B.a ENSGT00940000160230.m.a.a ENSGT00390000017359.k ENSGT00940000156484.a.c ENSGT00940000157454.rc.b ENSGT00940000155666.d.a ENSGT00390000018039.p ENSGT00950000182980.a.b.b.a.b.b.c.b ##22 ENSGT01050000244902.b.d.e ENSGT00940000167255 ENSGT00940000164695.a.g ENSGT00940000167260.c ENSGT00940000165900.d ENSGT00940000159399.c.b.b ENSGT00970000193421.A.cb ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00940000161295.n.a ENSGT00390000012863.c ENSGT00940000160655.w.b ENSGT00940000159485.j ENSGT00390000017583.e ENSGT00950000183095.a.b.a.b.a.q Chinook salmon MODERN SPECIES 4 LAYN (ENSOTSG00005043425) zgc:162608 (ENSOTSG00005043426) ENSOTSG00005043427 ttc12 (ENSOTSG00005043428) ankk1 (ENSOTSG00005043431) drd2a (ENSOTSG00005043432) scn3b (ENSOTSG00005043433) NRGN (ENSOTSG00005043436) hepacama (ENSOTSG00005043439) ENSOTSG00005043450 OAF (ENSOTSG00005043635) tlcd5a (ENSOTSG00005043639) ARHGEF12 (ENSOTSG00005043640) ENSOTSG00005043643 ENSOTSG00005043645 ENSOTSG00005043647 ##22 PTGIR (ENSOTSG00005043672) ENSOTSG00005043673 ppm1na (ENSOTSG00005043674) rtn2a (ENSOTSG00005043676) rhoub (ENSOTSG00005043677) rab4b (ENSOTSG00005043678) ap2s1 (ENSOTSG00005043679) ENSOTSG00005043680 NPAS1 (ENSOTSG00005043681) tmem160 (ENSOTSG00005043682) ENSOTSG00005043683 slc1a5 (ENSOTSG00005043684) fkrp (ENSOTSG00005001620) STRN4 (ENSOTSG00005001825) ENSOTSG00005003755 Coho salmon MODERN SPECIES 6 ttc9b (ENSOKIG00005009081) MAP3K10 (ENSOKIG00005009084) SIPA1L3 (ENSOKIG00005009109) qpctla (ENSOKIG00005009379) six9 (ENSOKIG00005009386) ##34 six5 (ENSOKIG00005009396) ENSOKIG00005009406 clptm1 (ENSOKIG00005009484) ENSOKIG00005010103 mrpl28 (ENSOKIG00005010118) ENSOKIG00005010132 ppp1r37 (ENSOKIG00005010148) bmp16 (ENSOKIG00005010205) gemin7 (ENSOKIG00005010213) ENSOKIG00005010216 ENSOKIG00005010225 ##22 PTGIR (ENSOKIG00005010261) ENSOKIG00005010262 ppm1na (ENSOKIG00005010273) rtn2a (ENSOKIG00005010286) rhoub (ENSOKIG00005010309) rab4b (ENSOKIG00005010321) ap2s1 (ENSOKIG00005010352) ARHGAP35 (ENSOKIG00005010433) NPAS1 (ENSOKIG00005010441) tmem160 (ENSOKIG00005010444) ENSOKIG00005010448 slc1a5 (ENSOKIG00005010455) fkrp (ENSOKIG00005010469) STRN4 (ENSOKIG00005010510) ENSOKIG00005011447 Salmo ANCESTRAL SPECIES 22 ENSGT00940000160358.k.a ENSGT00390000005773.c ENSGT00940000161494.i.a ENSGT00940000160518.a ENSGT00940000159183.u.b ENSGT00940000158292.b.e ##34 ENSGT00940000166238.a.c ENSGT00940000156119 ENSGT00530000063461.B.b ENSGT00940000160230.m.a.b ENSGT00390000017359.l ENSGT00940000156484.a.d ENSGT00940000157454.rc.a ENSGT00940000155666.d.b ENSGT00390000018039.o ENSGT00950000182980.a.b.b.a.b.b.c.b ##22 ENSGT01050000244902.b.d.f ENSGT00940000164695.a.h ENSGT00940000167260.d ENSGT00940000165900.c ENSGT00940000159399.c.b.a ENSGT00970000193421.A.bb ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00940000161295.n.a.a ENSGT00940000161295.n.a.b ENSGT00390000012863.d ENSGT00940000160655.w.a ENSGT00940000159485.i ENSGT00390000017583.f ENSGT00950000183095.a.b.a.b.a.r ENSGT00950000183024.a.b.b.j River trout MODERN SPECIES 4 si:ch211-160d20.3 (ENSSTUG00000021735) ttc9b (ENSSTUG00000021742) MAP3K10 (ENSSTUG00000021747) SIPA1L3 (ENSSTUG00000021779) six9 (ENSSTUG00000022381) ##34 six5 (ENSSTUG00000022386) tbcb (ENSSTUG00000022404) clptm1 (ENSSTUG00000022422) ENSSTUG00000022496 mrpl28 (ENSSTUG00000022510) ENSSTUG00000022525 ppp1r37 (ENSSTUG00000022547) bmp16 (ENSSTUG00000022832) gemin7 (ENSSTUG00000022970) ENSSTUG00000022993 ENSSTUG00000022999 ##22 PTGIR (ENSSTUG00000023110) ppm1na (ENSSTUG00000023117) rtn2a (ENSSTUG00000023138) rhoub (ENSSTUG00000001068) rab4b (ENSSTUG00000001302) ap2s1 (ENSSTUG00000001378) ARHGAP35 (ENSSTUG00000001456) NPAS1 (ENSSTUG00000001462) tmem160 (ENSSTUG00000001468) ENSSTUG00000001486 slc1a5 (ENSSTUG00000001501) fkrp (ENSSTUG00000001521) STRN4 (ENSSTUG00000001534) PRKD2 (ENSSTUG00000001609) gpr184 (ENSSTUG00000001949) Northern pike MODERN SPECIES MAP3K10 (ENSELUG00000014411) ENSELUG00000014393 SIPA1L3 (ENSELUG00000014332) ENSELUG00000028314 qpctla (ENSELUG00000014266) six9 (ENSELUG00000014253) ##34 six5 (ENSELUG00000014235) tbcb (ENSELUG00000014206) clptm1 (ENSELUG00000014159) ENSELUG00000000515 mrpl28 (ENSELUG00000014104) ENSELUG00000014075 ppp1r37 (ENSELUG00000000513) bmp16 (ENSELUG00000014051) gemin7 (ENSELUG00000014034) ENSELUG00000014007 ##22 PTGIR (ENSELUG00000013943) ENSELUG00000013934 ppm1na (ENSELUG00000013890) rtn2a (ENSELUG00000013859) rhoub (ENSELUG00000013830) rab4b (ENSELUG00000013817) ap2s1 (ENSELUG00000013793) ARHGAP35 (ENSELUG00000013772) NPAS1 (ENSELUG00000034542) tmem160 (ENSELUG00000013720) ENSELUG00000013701 slc1a5 (ENSELUG00000013665) fkrp (ENSELUG00000001171) STRN4 (ENSELUG00000013635) PRKD2 (ENSELUG00000013565) Protacanthopterygii ANCESTRAL SPECIES 11 ENSGT00390000012647 ENSGT00940000154783 ENSGT00390000007430 ENSGT00390000010397.a ENSGT00940000158195 ENSGT00550000075103 ENSGT00530000064165.a.c ENSGT00940000159437.d ENSGT00390000015815.h ENSGT00940000162317.c ENSGT00390000012589 ENSGT00950000183000.c.a.a.h ENSGT00390000013762.a.e ENSGT00510000048151.b ENSGT00940000156646.d ENSGT00950000182980.a.b.b.a.b.b.d ##22 ENSGT00900000141164.q.a ENSGT00940000165651.a ENSGT00940000157074 ENSGT00950000182985.b.b.sc ENSGT00940000164137.b ENSGT00940000167292.b.d ENSGT00940000167292.b.c ENSGT00940000164485.b ENSGT00940000155031.a.b ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007071 ENSGT00390000018613.b ENSGT01100000263497.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 169 ENSGT00940000164188.c.b ENSGT00940000164188.c.a.a ENSGT00940000159444.g ENSGT00390000000360.d ENSGT00960000187909 ENSGT00940000154783.m ENSGT00390000007430.k ENSGT00390000010397.a.h ENSGT00940000158195.g ENSGT00550000075103.m ENSGT00530000064165.a.c.c ENSGT00950000183000.c.a.a.h.a ENSGT00390000013762.a.e.d ENSGT00510000048151.b ENSGT00940000156646.d.b ENSGT00950000182980.a.b.b.a.b.b.d.a ##22 ENSGT00940000165651.a.c ENSGT00900000141164.q.a.a ENSGT00940000157074.g ENSGT00950000182985.b.b.sc.d.b.b ENSGT00940000164137.a.d Salmoninae_a ANCESTRAL SPECIES 4 ENSGT01060000248589.C.h.c ENSGT00940000160507.d ENSGT00940000164188.c.b ENSGT00940000159444.g ENSGT00390000000360.d ENSGT00940000154783.m ENSGT00390000007430.k ENSGT00390000010397.a.h ENSGT00940000158195.g ENSGT00550000075103.m ENSGT00530000064165.a.c.c ENSGT00950000183000.c.a.a.h.a ENSGT00390000013762.a.e.d ENSGT00510000048151.b ENSGT00940000156646.d.b ENSGT00950000182980.a.b.b.a.b.b.d.a ##22 ENSGT00900000141164.q.a.a ENSGT00940000165651.a.c ENSGT00940000157074.g ENSGT00950000182985.b.b.sc.d.b.b ENSGT00940000164137.b.a ENSGT00940000167292.b.c ENSGT00940000164485.b ENSGT00940000155031.a.b.c ENSGT00940000166053.c ENSGT00390000007071 ENSGT00390000018613.b.d ENSGT01100000263497.B.n ENSGT00390000011639.p.e ENSGT00390000007539.b.d ENSGT00390000018173.s Oncorhynchus ANCESTRAL SPECIES 4 ENSGT01060000248589.C.h.c ENSGT00940000160507.d ENSGT00940000164188.c.b ENSGT00940000159444.g ENSGT00390000000360.d ENSGT00940000154783.m ENSGT00390000007430.k ENSGT00390000010397.a.h ENSGT00940000158195.g ENSGT00550000075103.m ENSGT00530000064165.a.c.c ENSGT00950000183000.c.a.a.h.a ENSGT00390000013762.a.e.d ENSGT00510000048151.b ENSGT00940000156646.d.b ENSGT00950000182980.a.b.b.a.b.b.d.a ##22 ENSGT00900000141164.q.a.a ENSGT00940000165651.a.c ENSGT00940000157074.g ENSGT00950000182985.b.b.sc.d.b.b ENSGT00940000164137.b.a ENSGT00940000167292.b.c ENSGT00940000164916.nb.b ENSGT00940000164485.b ENSGT00940000155031.a.b.c ENSGT00940000166053.c ENSGT00390000007071 ENSGT00390000018613.b.d ENSGT01100000263497.B.n ENSGT00390000011639.p.e ENSGT00390000007539.b.d Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT01060000248589.C.h.c ENSGT00940000160507.d ENSGT00940000164188.c.b ENSGT00940000159444.g ENSGT00390000000360.d ENSGT00940000154783.m ENSGT00390000007430.k ENSGT00390000010397.a.h ENSGT00940000158195.g ENSGT00550000075103.m ENSGT00530000064165.a.c.c ENSGT00950000183000.c.a.a.h.a ENSGT00390000013762.a.e.d ENSGT00510000048151.b ENSGT00940000156646.d.b ENSGT00950000182980.a.b.b.a.b.b.d.a ##22 ENSGT00900000141164.q.a.a ENSGT00940000165651.a.c ENSGT00940000157074.g ENSGT00950000182985.b.b.sc.d.b.b ENSGT00940000164137.b.a ENSGT00940000167292.b.c ENSGT00940000164916.nb.b ENSGT00940000164485.b ENSGT00940000155031.a.b.c ENSGT00940000166053.c ENSGT00390000007071 ENSGT00390000018613.b.d ENSGT01100000263497.B.n ENSGT00390000011639.p.e ENSGT00390000007539.b.d Coho salmon MODERN SPECIES 20 ENSOKIG00005046601 ENSOKIG00005046596 ENSOKIG00005046591 GABRA3 (ENSOKIG00005046570) ENSOKIG00005046536 fundc2 (ENSOKIG00005046524) TMEM164 (ENSOKIG00005046517) ammecr1 (ENSOKIG00005046512) kif4 (ENSOKIG00005046404) mrps12 (ENSOKIG00005046362) ENSOKIG00005046347 CFL1 (ENSOKIG00005046341) ENSOKIG00005046337 ENSOKIG00005046334 slc3a2b (ENSOKIG00005046307) ENSOKIG00005046294 ##22 ENSOKIG00005046288 pcxa (ENSOKIG00005045861) fkbp2 (ENSOKIG00005045785) ppp1r14ba (ENSOKIG00005045771) slc8a4a (ENSOKIG00005045724) ENSOKIG00005045712 zgc:110782 (ENSOKIG00005045696) zgc:77262 (ENSOKIG00005045690) MARK2 (ENSOKIG00005039989) ENSOKIG00005039780 SART1 (ENSOKIG00005039411) banf1 (ENSOKIG00005039366) gng3 (ENSOKIG00005039348) bscl2 (ENSOKIG00005039258) ENSOKIG00005038545 Chinook salmon MODERN SPECIES 23 ENSOTSG00005031415 GABRA3 (ENSOTSG00005031417) ENSOTSG00005031419 fundc2 (ENSOTSG00005031420) TMEM164 (ENSOTSG00005028948) ammecr1 (ENSOTSG00005028949) kif4 (ENSOTSG00005028956) mrps12 (ENSOTSG00005029125) ENSOTSG00005029128 cfl1 (ENSOTSG00005029131) ENSOTSG00005029133 ENSOTSG00005029135 ENSOTSG00005029136 ENSOTSG00005029140 slc3a2b (ENSOTSG00005029144) ENSOTSG00005029147 ##22 pcxa (ENSOTSG00005029154) ENSOTSG00005029242 fkbp2 (ENSOTSG00005029244) ppp1r14ba (ENSOTSG00005029248) slc8a4a (ENSOTSG00005029249) ENSOTSG00005029251 zgc:77262 (ENSOTSG00005029289) MARK2 (ENSOTSG00005029319) ENSOTSG00005030787 SART1 (ENSOTSG00005030800) banf1 (ENSOTSG00005030974) gng3 (ENSOTSG00005030977) bscl2 (ENSOTSG00005030985) ENSOTSG00005030988 ENSOTSG00005031022 Salmo ANCESTRAL SPECIES 18 ENSGT00940000160507.d ENSGT00940000164188.c.a.a ENSGT00940000159444.g ENSGT00390000000360.d ENSGT00940000154783.m ENSGT00390000007430.k ENSGT00390000010397.a.h ENSGT00940000158195.g ENSGT00550000075103.m ENSGT00530000064165.a.c.c ENSGT00390000015815.h.f ENSGT00950000183000.c.a.a.h.a ENSGT00390000013762.a.e.d ENSGT00510000048151.b ENSGT00940000156646.d.b ENSGT00950000182980.a.b.b.a.b.b.d.a ##22 ENSGT00900000141164.q.a.a ENSGT00940000165651.a.c ENSGT00940000157074.g ENSGT00950000182985.b.b.sc.d.b.b ENSGT00940000164137.b.a ENSGT00940000167292.b.c ENSGT01100000266607 ENSGT00940000164485.b ENSGT00940000155031.a.b.c ENSGT00940000166053.c ENSGT00390000007071 ENSGT00390000018613.b.d ENSGT01100000263497.B.n ENSGT00390000011639.p.e ENSGT00390000007539.b.d River trout MODERN SPECIES 10 ENSSTUG00000021670 ENSSTUG00000021859 GABRA3 (ENSSTUG00000021892) BRCC3 (ENSSTUG00000021936) fundc2 (ENSSTUG00000021972) TMEM164 (ENSSTUG00000016281) ammecr1 (ENSSTUG00000016287) kif4 (ENSSTUG00000016319) mrps12 (ENSSTUG00000016873) ENSSTUG00000016882 ENSSTUG00000016887 cfl1 (ENSSTUG00000016894) ENSSTUG00000016904 ENSSTUG00000016906 slc3a2b (ENSSTUG00000016932) ENSSTUG00000016950 ##22 pcxa (ENSSTUG00000017031) ENSSTUG00000019209 fkbp2 (ENSSTUG00000019217) ppp1r14ba (ENSSTUG00000019252) slc8a4a (ENSSTUG00000019257) ENSSTUG00000019271 ENSSTUG00000019279 zgc:77262 (ENSSTUG00000019291) MARK2 (ENSSTUG00000019440) ENSSTUG00000023414 SART1 (ENSSTUG00000023424) banf1 (ENSSTUG00000023623) gng3 (ENSSTUG00000023636) bscl2 (ENSSTUG00000023653) ENSSTUG00000023688 Atlantic salmon MODERN SPECIES 23 ENSSSAG00000077567 ENSSSAG00000100861 fundc2 (ENSSSAG00000077555) ENSSSAG00000107635 ENSSSAG00000119868 ammecr1 (ENSSSAG00000077547) kif4 (ENSSSAG00000077347) RT12 (ENSSSAG00000077311) ENSSSAG00000077308 fibpb (ENSSSAG00000077299) ENSSSAG00000118568 COF2 (ENSSSAG00000077295) ENSSSAG00000077291 ENSSSAG00000110097 slc3a2b (ENSSSAG00000077280) calm2a (ENSSSAG00000108588) ##22 ENSSSAG00000077273 pcxa (ENSSSAG00000076798) fkbp2 (ENSSSAG00000076774) ppp1r14ba (ENSSSAG00000076770) slc8a4a (ENSSSAG00000076764) BAD (ENSSSAG00000076758) ENSSSAG00000076756 zgc:77262 (ENSSSAG00000076753) ENSSSAG00000071344 ENSSSAG00000071217 ENSSSAG00000070936 gng3 (ENSSSAG00000093499) bscl2 (ENSSSAG00000070897) ENSSSAG00000069675 prdx5 (ENSSSAG00000069629) Huchen MODERN SPECIES 840 ENSHHUG00000042982 cmc4 (ENSHHUG00000042979) fundc2 (ENSHHUG00000042976) TMEM164 (ENSHHUG00000042973) ammecr1 (ENSHHUG00000042968) kif4 (ENSHHUG00000042940) mrps12 (ENSHHUG00000042938) ENSHHUG00000042933 ENSHHUG00000042931 cfl1 (ENSHHUG00000042878) ENSHHUG00000042873 ENSHHUG00000042864 slc3a2b (ENSHHUG00000042856) ENSHHUG00000042592 ##22 ENSHHUG00000042586 pcxa (ENSHHUG00000042471) fkbp2 (ENSHHUG00000042447) ppp1r14ba (ENSHHUG00000042443) ENSHHUG00000042437 Salmoninae ANCESTRAL SPECIES 69 ENSGT00390000000360.c ENSGT00390000012647 ENSGT00940000154783.n ENSGT00390000007430.l ENSGT00390000010397.a.g ENSGT00940000158195.h ENSGT00550000075103.n ENSGT00530000064165.a.c.d ENSGT00940000159437.d ENSGT00390000015815.h ENSGT00940000162317.c ENSGT00390000012589 ENSGT00950000183000.c.a.a.h.b ENSGT00390000013762.a.e.c ENSGT00940000156646.d.a ENSGT00950000182980.a.b.b.a.b.b.d.b ##22 ENSGT00900000141164.q.a.b ENSGT00940000165651.a.d ENSGT00940000157074.h ENSGT00950000182985.b.b.sc.d.b.a ENSGT00940000164137.b.b ENSGT00940000167292.b.d ENSGT00940000155031.a.b.d ENSGT00940000166053.d ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000018613.b.c ENSGT01100000263497.B.m ENSGT00390000011639.p.f ENSGT00390000007539.b.c ENSGT00390000018173.t Huchen MODERN SPECIES 742 CMC4 (ENSHHUG00000025177) fundc2 (ENSHHUG00000025181) TMEM164 (ENSHHUG00000025184) ammecr1 (ENSHHUG00000025191) kif4 (ENSHHUG00000025205) mrps12 (ENSHHUG00000025312) ENSHHUG00000025317 efemp2b (ENSHHUG00000025324) fibpb (ENSHHUG00000025371) CCDC85B (ENSHHUG00000025408) tmem223 (ENSHHUG00000025410) cfl1 (ENSHHUG00000025411) ENSHHUG00000025416 ENSHHUG00000025478 slc3a2b (ENSHHUG00000025493) ENSHHUG00000025510 ##22 pcxa (ENSHHUG00000025801) ENSHHUG00000026245 fkbp2 (ENSHHUG00000026249) ppp1r14ba (ENSHHUG00000026310) slc8a4a (ENSHHUG00000026313) ENSHHUG00000026367 zgc:110782 (ENSHHUG00000026369) zgc:77262 (ENSHHUG00000026370) ENSHHUG00000026372 ENSHHUG00000026375 Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00390000012647 ENSGT00940000154783.n ENSGT00390000007430.l ENSGT00390000010397.a.g ENSGT00940000158195.h ENSGT00550000075103.n ENSGT00530000064165.a.c.d ENSGT00940000159437.d ENSGT00390000015815.h.f ENSGT00940000162317.c ENSGT00390000012589 ENSGT00950000183000.c.a.a.h.b ENSGT00390000013762.a.e.c ENSGT00990000214255 ENSGT00940000156646.d.a ENSGT00950000182980.a.b.b.a.b.b.d.b ##22 ENSGT00900000141164.q.a.b ENSGT00940000165651.a.d ENSGT00940000157074.h ENSGT00950000182985.b.b.sc.d.b.a ENSGT00940000164137.b.b ENSGT00940000167292.b.d ENSGT00940000155031.a.b.d ENSGT00940000166053.d ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000018613.b.c ENSGT01100000263497.B.m ENSGT00390000011639.p.f ENSGT00390000007539.b.c ENSGT00390000018173.t Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00390000012647 ENSGT00940000154783.n ENSGT00390000007430.l ENSGT00390000010397.a.g ENSGT00940000158195.h ENSGT00550000075103.n ENSGT00530000064165.a.c.d ENSGT00940000159437.d ENSGT00390000015815.h.f ENSGT00940000162317.c ENSGT00390000012589 ENSGT00950000183000.c.a.a.h.b ENSGT00390000013762.a.e.c ENSGT00990000214255 ENSGT00940000156646.d.a ENSGT00950000182980.a.b.b.a.b.b.d.b ##22 ENSGT00900000141164.q.a.b ENSGT00940000165651.a.d ENSGT00940000157074.h ENSGT00950000182985.b.b.sc.d.b.a ENSGT00940000164137.b.b ENSGT00940000167292.b.d ENSGT00940000164916.nb.a ENSGT00940000155031.a.b.d ENSGT00940000166053.d ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000018613.b.c ENSGT01100000263497.B.m ENSGT00390000011639.p.f ENSGT00390000007539.b.c Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00390000012647 ENSGT00940000154783.n ENSGT00390000007430.l ENSGT00390000010397.a.g ENSGT00940000158195.h ENSGT00550000075103.n ENSGT00530000064165.a.c.d ENSGT00940000159437.d ENSGT00390000015815.h.f ENSGT00940000162317.c ENSGT00390000012589 ENSGT00950000183000.c.a.a.h.b ENSGT00390000013762.a.e.c ENSGT00990000214255 ENSGT00940000156646.d.a ENSGT00950000182980.a.b.b.a.b.b.d.b ##22 ENSGT00900000141164.q.a.b ENSGT00940000165651.a.d ENSGT00940000157074.h ENSGT00950000182985.b.b.sc.d.b.a ENSGT00940000164137.b.b ENSGT00940000167292.b.d ENSGT00940000164916.nb.a ENSGT00940000155031.a.b.d ENSGT00940000166053.d ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000018613.b.c ENSGT01100000263497.B.m ENSGT00390000011639.p.f ENSGT00390000007539.b.c Coho salmon MODERN SPECIES 21 fundc2 (ENSOKIG00005046408) TMEM164 (ENSOKIG00005046401) ENSOKIG00005046398 ammecr1 (ENSOKIG00005046387) kif4 (ENSOKIG00005045977) mrps12 (ENSOKIG00005045939) ENSOKIG00005045933 efemp2b (ENSOKIG00005045769) fibpb (ENSOKIG00005045740) CCDC85B (ENSOKIG00005045737) tmem223 (ENSOKIG00005045732) CFL1 (ENSOKIG00005045721) ENSOKIG00005045715 ENSOKIG00005045704 slc3a2b (ENSOKIG00005045697) ENSOKIG00005045679 ##22 ENSOKIG00005045673 pcxa (ENSOKIG00005044337) fkbp2 (ENSOKIG00005044217) ppp1r14ba (ENSOKIG00005044212) ENSOKIG00005044203 slc8a4a (ENSOKIG00005044186) ENSOKIG00005044175 zgc:110782 (ENSOKIG00005044160) MARK2 (ENSOKIG00005041490) ENSOKIG00005041285 ENSOKIG00005041276 sart1 (ENSOKIG00005040975) banf1 (ENSOKIG00005040913) gng3 (ENSOKIG00005040884) bscl2 (ENSOKIG00005040849) Chinook salmon MODERN SPECIES 26 ENSOTSG00005003427 fundc2 (ENSOTSG00005003424) TMEM164 (ENSOTSG00005003422) ammecr1 (ENSOTSG00005003420) kif4 (ENSOTSG00005003278) mrps12 (ENSOTSG00005003247) ENSOTSG00005003246 efemp2b (ENSOTSG00005002987) fibpb (ENSOTSG00005012517) CCDC85B (ENSOTSG00005012514) tmem223 (ENSOTSG00005012513) cfl1 (ENSOTSG00005012511) ENSOTSG00005012509 ENSOTSG00005012508 slc3a2b (ENSOTSG00005012507) ENSOTSG00005012505 ##22 ENSOTSG00005012502 pcxa (ENSOTSG00005012453) fkbp2 (ENSOTSG00005012449) ppp1r14ba (ENSOTSG00005012448) slc8a4a (ENSOTSG00005012446) ENSOTSG00005012444 zgc:110782 (ENSOTSG00005012442) MARK2 (ENSOTSG00005009591) ENSOTSG00005009562 ENSOTSG00005009561 sart1 (ENSOTSG00005009462) banf1 (ENSOTSG00005009460) gng3 (ENSOTSG00005009459) bscl2 (ENSOTSG00005009456) ENSOTSG00005007678 Rainbow trout MODERN SPECIES 364 ENSOMYG00000038019 ENSOMYG00000050510 ammecr1 (ENSOMYG00000038209) kif4 (ENSOMYG00000038405) ENSOMYG00000052976 mrps12 (ENSOMYG00000038677) ENSOMYG00000038688 efemp2b (ENSOMYG00000038715) fibpb (ENSOMYG00000038742) CCDC85B (ENSOMYG00000038775) tmem223 (ENSOMYG00000038779) ENSOMYG00000038789 ENSOMYG00000056696 ENSOMYG00000038832 slc3a2b (ENSOMYG00000038863) ENSOMYG00000073801 ##22 pcxa (ENSOMYG00000039910) ENSOMYG00000043027 ENSOMYG00000072288 fkbp2 (ENSOMYG00000043031) ppp1r14ba (ENSOMYG00000070297) slc8a4a (ENSOMYG00000043050) ENSOMYG00000066035 ENSOMYG00000043056 zgc:110782 (ENSOMYG00000043060) ENSOMYG00000043105 ENSOMYG00000043384 ENSOMYG00000056601 sart1 (ENSOMYG00000043439) banf1 (ENSOMYG00000043486) gng3 (ENSOMYG00000032989) Salmo ANCESTRAL SPECIES 1 ENSGT00390000000360.c ENSGT00390000012647 ENSGT00940000154783.n ENSGT00390000007430.l ENSGT00390000010397.a.g ENSGT00940000158195.h ENSGT00550000075103.n ENSGT00530000064165.a.c.d ENSGT00940000159437.d ENSGT00390000015815.h.e ENSGT00940000162317.c ENSGT00950000183000.c.a.a.h.b ENSGT00390000013762.a.e.c ENSGT00990000214255 ENSGT00940000156646.d.a ENSGT00950000182980.a.b.b.a.b.b.d.b ##22 ENSGT00900000141164.q.a.b ENSGT00940000165651.a.d ENSGT00940000157074.h ENSGT00950000182985.b.b.sc.d.b.a ENSGT00940000164137.b.b ENSGT00940000167292.b.d ENSGT00940000164916 ENSGT00390000007971 ENSGT00940000155031.a.b.d ENSGT00940000166053.d ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000018613.b.c ENSGT01100000263497.B.m ENSGT00390000011639.p.f Atlantic salmon MODERN SPECIES 2 brcc3 (ENSSSAG00000014566) ENSSSAG00000015070 fundc2 (ENSSSAG00000120557) ENSSSAG00000015213 ENSSSAG00000101457 ammecr1 (ENSSSAG00000106885) ENSSSAG00000086893 kif4 (ENSSSAG00000015319) ENSSSAG00000015446 efemp2b (ENSSSAG00000015480) fibpb (ENSSSAG00000110899) COF2 (ENSSSAG00000016215) ENSSSAG00000016369 ENSSSAG00000016423 slc3a2b (ENSSSAG00000111850) ENSSSAG00000016565 ##22 pcxa (ENSSSAG00000017625) ENSSSAG00000119069 FKBP2 (ENSSSAG00000037619) ppp1r14ba (ENSSSAG00000116542) slc8a4a (ENSSSAG00000038024) ENSSSAG00000038508 zgc:110782 (ENSSSAG00000121337) ENSSSAG00000039397 ENSSSAG00000105351 ENSSSAG00000050806 sart1 (ENSSSAG00000050823) bscl2 (ENSSSAG00000050994) nxf1 (ENSSSAG00000051042) prdx5 (ENSSSAG00000051514) ENSSSAG00000051529 River trout MODERN SPECIES 3 ENSSTUG00000010663 fundc2 (ENSSTUG00000010666) TMEM164 (ENSSTUG00000010679) ammecr1 (ENSSTUG00000010685) kif4 (ENSSTUG00000010732) mrps12 (ENSSTUG00000011371) ENSSTUG00000011385 efemp2b (ENSSTUG00000011425) fibpb (ENSSTUG00000026935) CCDC85B (ENSSTUG00000027022) cfl1 (ENSSTUG00000027025) ENSSTUG00000027036 ENSSTUG00000027038 ENSSTUG00000027044 slc3a2b (ENSSTUG00000027073) ENSSTUG00000027084 ##22 pcxa (ENSSTUG00000027151) ENSSTUG00000027381 ENSSTUG00000027382 fkbp2 (ENSSTUG00000027387) ppp1r14ba (ENSSTUG00000027408) slc8a4a (ENSSTUG00000027412) ENSSTUG00000027419 zgc:110782 (ENSSTUG00000027424) MARK2 (ENSSTUG00000027524) ENSSTUG00000031928 ENSSTUG00000031940 sart1 (ENSSTUG00000031947) banf1 (ENSSTUG00000032269) gng3 (ENSSTUG00000032282) bscl2 (ENSSTUG00000032304) Northern pike MODERN SPECIES 6 cmc4 (ENSELUG00000014856) fundc2 (ENSELUG00000033100) TMEM164 (ENSELUG00000014898) ammecr1 (ENSELUG00000014919) kif4 (ENSELUG00000014965) MRPS12 (ENSELUG00000026877) ENSELUG00000015024 efemp2b (ENSELUG00000015086) fibpb (ENSELUG00000000545) CCDC85B (ENSELUG00000015142) tmem223 (ENSELUG00000015149) cfl1 (ENSELUG00000015160) ENSELUG00000015170 ENSELUG00000015184 slc3a2b (ENSELUG00000015213) ENSELUG00000015269 ##22 pcxa (ENSELUG00000015354) ENSELUG00000015305 fkbp2 (ENSELUG00000015454) ppp1r14ba (ENSELUG00000015483) slc8a4a (ENSELUG00000015498) ENSELUG00000015517 ENSELUG00000015539 zgc:77262 (ENSELUG00000031478) MARK2 (ENSELUG00000015657) ENSELUG00000015706 ENSELUG00000015715 sart1 (ENSELUG00000015791) banf1 (ENSELUG00000001189) gng3 (ENSELUG00000019216) bscl2 (ENSELUG00000015842) Osteoglossiformes ANCESTRAL SPECIES 85 ENSGT00940000166868 ENSGT00950000182980.a.b.b.a.b.b ##22 ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000159399 ENSGT00970000193421.A ENSGT00940000154553.a.a ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000161295 ENSGT00390000012863 ENSGT00940000160655.kb ENSGT00940000160655.jb ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b.k ENSGT01100000263537.b.b.c.b Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 19 ENSSFOG00015004050 znf711 (ENSSFOG00015004064) kctd12b (ENSSFOG00015004112) taf1 (ENSSFOG00015004159) ENSSFOG00015030568 OGT (ENSSFOG00015004499) plp1b (ENSSFOG00015004596) nlgn3a (ENSSFOG00015004656) GRIA3 (ENSSFOG00015004701) THOC2 (ENSSFOG00015004767) STAG2 (ENSSFOG00015004879) acsl4b (ENSSFOG00015004988) MID2 (ENSSFOG00015005025) ENSSFOG00015029870 ENSSFOG00015005072 ENSSFOG00015005100 ##22 ppm1nb (ENSSFOG00015005140) rtn2b (ENSSFOG00015032049) RAB4B (ENSSFOG00015005173) ARHGAP35 (ENSSFOG00015005210) ENSSFOG00015026092 slc1a5 (ENSSFOG00015005253) PRKD2 (ENSSFOG00015005283) DSCAML1 (ENSSFOG00015005337) ENSSFOG00015005441 scn4bb (ENSSFOG00015005459) zgc:153990 (ENSSFOG00015005526) ENSSFOG00015005535 alkbh6 (ENSSFOG00015005576) ENSSFOG00015029428 fpgt (ENSSFOG00015005604) Asian bonytongue MODERN SPECIES 13 her1 (ENSSFOG00015018051) ENSSFOG00015018065 her7 (ENSSFOG00015018078) pfdn6 (ENSSFOG00015018089) mrps12 (ENSSFOG00015018102) NPAS4 (ENSSFOG00015031883) efemp2b (ENSSFOG00015018161) ENSSFOG00015018304 tmem223 (ENSSFOG00015018309) ENSSFOG00015018318 ENSSFOG00015018328 TMEM151A (ENSSFOG00015025550) ENSSFOG00015030268 ENSSFOG00015018349 slc3a2b (ENSSFOG00015018360) ENSSFOG00015030399 ##22 ENSSFOG00015018435 pcxa (ENSSFOG00015018392) fkbp2 (ENSSFOG00015032554) ppp1r14bb (ENSSFOG00015026465) slc8a4a (ENSSFOG00015018478) PPP2R5B (ENSSFOG00015018534) zgc:77262 (ENSSFOG00015028830) naa40 (ENSSFOG00015018622) RCOR2 (ENSSFOG00015018659) MARK2 (ENSSFOG00015018688) ENSSFOG00015018777 ENSSFOG00015018782 SART1 (ENSSFOG00015018792) ENSSFOG00015032485 gng3 (ENSSFOG00015027748)