Tetrapoda ANCESTRAL SPECIES 26 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00980000202663 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000167008 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000163886.B.a ENSGT00940000161279 ENSGT00940000153993.B Amniota ANCESTRAL SPECIES 46 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000163886.B.a ENSGT00940000161279 Mammalia ANCESTRAL SPECIES 31 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 ENSGT00940000153339 #37 Theria ANCESTRAL SPECIES 2 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 ENSGT00940000153339 #37 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 ENSGT00940000153339 #37 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Glires ANCESTRAL SPECIES 4 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Myomorpha ANCESTRAL SPECIES 2 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Lesser Egyptian jerboa MODERN SPECIES 42 Hoxc12 (ENSJJAG00000024305) #7 Hoxc13 (ENSJJAG00000023584) #8 Calcoco1 (ENSJJAG00000011789) #9 Atp5g2 (ENSJJAG00000009417) #10 Atf7 (ENSJJAG00000014294) #11 ENSJJAG00000012378 #12 Npff (ENSJJAG00000010307) #13 ENSJJAG00000007198 #14 Gm10337 (ENSJJAG00000003834) #15 Map3k12 (ENSJJAG00000007805) #16 ENSJJAG00000019739 #17 ENSJJAG00000011729 #18 Amhr2 (ENSJJAG00000001950) #19 Sp1 (ENSJJAG00000013725) #20 Sp7 (ENSJJAG00000016003) #21 Aaas (ENSJJAG00000017804) #22 ENSJJAG00000017792 #23 Myg1 (ENSJJAG00000012427) #24 Espl1 (ENSJJAG00000020338) #25 Mfsd5 (ENSJJAG00000019216) #26 Rarg (ENSJJAG00000019786) #27 Itgb7 (ENSJJAG00000016744) #28 ENSJJAG00000023791 #29 Csad (ENSJJAG00000002414) #30 Soat2 (ENSJJAG00000023343) #31 Igfbp6 (ENSJJAG00000013008) #32 Spryd3 (ENSJJAG00000021510) #33 Tns2 (ENSJJAG00000010755) #34 Eif4b (ENSJJAG00000021178) #35 Krt18 (ENSJJAG00000003448) #36 Krt8 (ENSJJAG00000016043) #37 Muroidea ANCESTRAL SPECIES 31 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.`b.b #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.`b.b #10 ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d.v #36 Golden Hamster MODERN SPECIES 626 Hoxc8 (ENSMAUG00000016196) Hoxc9 (ENSMAUG00000016070) Hoxc10 (ENSMAUG00000015971) Hoxc11 (ENSMAUG00000015214) Hoxc12 (ENSMAUG00000015132) #7 Hoxc13 (ENSMAUG00000014990) #8 Calcoco1 (ENSMAUG00000013934) #9 ENSMAUG00000020460 #10 Atf7 (ENSMAUG00000020350) #11 Tarbp2 (ENSMAUG00000019805) #14 Map3k12 (ENSMAUG00000019237) #16 ENSMAUG00000018893 #17 Prr13 (ENSMAUG00000018724) Sp1 (ENSMAUG00000018418) #20 Sp7 (ENSMAUG00000010687) #21 Aaas (ENSMAUG00000017306) #22 Myg1 (ENSMAUG00000016541) #24 Pfdn5 (ENSMAUG00000016172) #23 Espl1 (ENSMAUG00000015882) #25 Mfsd5 (ENSMAUG00000020935) #26 Rarg (ENSMAUG00000020715) #27 Itgb7 (ENSMAUG00000020375) #28 Zfp740 (ENSMAUG00000017995) #29 Csad (ENSMAUG00000017154) #30 Soat2 (ENSMAUG00000016033) #31 Igfbp6 (ENSMAUG00000018051) #32 Spryd3 (ENSMAUG00000017127) #33 Tns2 (ENSMAUG00000015595) #34 Eif4b (ENSMAUG00000018343) #35 ENSMAUG00000017515 #36 Krt8 (ENSMAUG00000016517) #37 Chinese hamster chok1gshd MODERN SPECIES 1 Hoxc13 (ENSCGRG00001013867) #8 Calcoco1 (ENSCGRG00001014119) #9 ENSCGRG00001017197 #10 Atf7 (ENSCGRG00001016192) #11 ENSCGRG00001015358 #12 Npff (ENSCGRG00001012802) #13 TARBP2 (ENSCGRG00001011856) #14 Gm10337 (ENSCGRG00001010232) #15 Map3k12 (ENSCGRG00001012727) #16 ENSCGRG00001012894 #17 Prr13 (ENSCGRG00001016470) Amhr2 (ENSCGRG00001012924) #19 ENSCGRG00001011981 Sp1 (ENSCGRG00001013852) #20 Sp7 (ENSCGRG00001012000) #21 Aaas (ENSCGRG00001012977) #22 Myg1 (ENSCGRG00001011384) #24 Pfdn5 (ENSCGRG00001016773) #23 Espl1 (ENSCGRG00001019762) #25 Mfsd5 (ENSCGRG00001009958) #26 Gm9918 (ENSCGRG00001009834) Rarg (ENSCGRG00001012774) #27 Itgb7 (ENSCGRG00001013435) #28 Zfp740 (ENSCGRG00001010943) #29 Csad (ENSCGRG00001014017) #30 Soat2 (ENSCGRG00001017110) #31 Igfbp6 (ENSCGRG00001012017) #32 Spryd3 (ENSCGRG00001011326) #33 Tns2 (ENSCGRG00001013620) #34 Eif4b (ENSCGRG00001014070) #35 ENSCGRG00001013532 #36 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.`b.b #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153336.f ##35 ENSGT00940000153309.d #36 Prairie vole MODERN SPECIES 2 Hoxc10 (ENSMOCG00000009084) Hoxc11 (ENSMOCG00000010091) Hoxc12 (ENSMOCG00000016790) #7 Hoxc13 (ENSMOCG00000001084) #8 Calcoco1 (ENSMOCG00000010205) #9 Atp5g2 (ENSMOCG00000012641) #10 Atf7 (ENSMOCG00000014166) #11 Npff (ENSMOCG00000018084) #13 Tarbp2 (ENSMOCG00000003691) #14 Map3k12 (ENSMOCG00000015681) #16 ENSMOCG00000010409 #17 Prr13 (ENSMOCG00000014216) Amhr2 (ENSMOCG00000015653) #19 Sp1 (ENSMOCG00000019761) #20 Sp7 (ENSMOCG00000004740) #21 Aaas (ENSMOCG00000010752) #22 Myg1 (ENSMOCG00000010593) #24 ENSMOCG00000016981 #23 Espl1 (ENSMOCG00000000327) #25 Mfsd5 (ENSMOCG00000015218) #26 Rarg (ENSMOCG00000017875) #27 Itgb7 (ENSMOCG00000015998) #28 Zfp740 (ENSMOCG00000008851) #29 Csad (ENSMOCG00000010697) #30 Soat2 (ENSMOCG00000019188) #31 Igfbp6 (ENSMOCG00000019916) #32 Spryd3 (ENSMOCG00000021720) #33 Tns2 (ENSMOCG00000018864) #34 ENSMOCG00000015277 #35 ENSMOCG00000021743 ENSMOCG00000002864 Northern American deer mouse MODERN SPECIES 12 Hoxc10 (ENSPEMG00000013609) Hoxc11 (ENSPEMG00000011561) Hoxc12 (ENSPEMG00000013217) #7 Hoxc13 (ENSPEMG00000005314) #8 Calcoco1 (ENSPEMG00000014813) #9 ENSPEMG00000017690 #10 Atf7 (ENSPEMG00000016864) #11 Npff (ENSPEMG00000029282) #13 Tarbp2 (ENSPEMG00000014285) #14 Map3k12 (ENSPEMG00000000990) #16 ENSPEMG00000013236 #17 Prr13 (ENSPEMG00000017327) Amhr2 (ENSPEMG00000004637) #19 Sp1 (ENSPEMG00000016000) #20 Sp7 (ENSPEMG00000006882) #21 Aaas (ENSPEMG00000009586) #22 Myg1 (ENSPEMG00000012414) #24 Pfdn5 (ENSPEMG00000004263) #23 Espl1 (ENSPEMG00000019219) #25 Mfsd5 (ENSPEMG00000013196) #26 Rarg (ENSPEMG00000014599) #27 Itgb7 (ENSPEMG00000016354) #28 Zfp740 (ENSPEMG00000026625) #29 Csad (ENSPEMG00000012689) #30 Soat2 (ENSPEMG00000015574) #31 Igfbp6 (ENSPEMG00000019192) #32 Spryd3 (ENSPEMG00000019117) #33 Tns2 (ENSPEMG00000002537) #34 ENSPEMG00000016399 ##35 Krt18 (ENSPEMG00000005282) #36 Krt8 (ENSPEMG00000014514) #37 Murinae ANCESTRAL SPECIES 10 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535.b #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Mus ANCESTRAL SPECIES 11 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535.b #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Mus_A ANCESTRAL SPECIES 13 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261.e.a #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535.b #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Mus_B ANCESTRAL SPECIES 12 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261.e.a #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.u #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535.b #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Mouse MODERN SPECIES 6 Hoxc11 (ENSMUSG00000001656) Hoxc12 (ENSMUSG00000050328) #7 Hoxc13 (ENSMUSG00000001655) #8 Calcoco1 (ENSMUSG00000023055) #9 Atp5g2 (ENSMUSG00000062683) #10 Atf7 (ENSMUSG00000099083) #11 Npff (ENSMUSG00000023052) #13 Tarbp2 (ENSMUSG00000023051) #14 Gm10337 (ENSMUSG00000071586) #15 Map3k12 (ENSMUSG00000023050) #16 Pcbp2 (ENSMUSG00000056851) #17 Prr13 (ENSMUSG00000023048) Amhr2 (ENSMUSG00000023047) #19 Sp1 (ENSMUSG00000001280) #20 Sp7 (ENSMUSG00000060284) #21 Aaas (ENSMUSG00000036678) #22 Myg1 (ENSMUSG00000001285) #24 Pfdn5 (ENSMUSG00000001289) #23 Espl1 (ENSMUSG00000058290) #25 Mfsd5 (ENSMUSG00000045665) #26 Gm9918 (ENSMUSG00000097050) Rarg (ENSMUSG00000001288) #27 Itgb7 (ENSMUSG00000001281) #28 Zfp740 (ENSMUSG00000046897) #29 Csad (ENSMUSG00000023044) #30 Soat2 (ENSMUSG00000023045) #31 Igfbp6 (ENSMUSG00000023046) #32 Spryd3 (ENSMUSG00000036966) #33 Tns2 (ENSMUSG00000037003) #34 Eif4b (ENSMUSG00000058655) #35 Krt18 (ENSMUSG00000023043) #36 Mus_C ANCESTRAL SPECIES 17 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.y #10 ENSGT00940000155261.e.a #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m #17 ENSGT00730000113467 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.u #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535.b #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 spretus MODERN SPECIES 6 Hoxc12 (MGP_SPRETEiJ_G0021256) #7 Hoxc13 (MGP_SPRETEiJ_G0021255) #8 Calcoco1 (MGP_SPRETEiJ_G0021254) #9 MGP_SPRETEiJ_G0021253 #10 MGP_SPRETEiJ_G0021252 #11 MGP_SPRETEiJ_G0021251 #11 Npff (MGP_SPRETEiJ_G0021250) #13 Tarbp2 (MGP_SPRETEiJ_G0021249) #14 Gm10337 (MGP_SPRETEiJ_G0021248) #15 Map3k12 (MGP_SPRETEiJ_G0021247) #16 Pcbp2 (MGP_SPRETEiJ_G0021246) #17 MGP_SPRETEiJ_G0021245 Amhr2 (MGP_SPRETEiJ_G0021244) #19 Sp1 (MGP_SPRETEiJ_G0021243) #20 Sp7 (MGP_SPRETEiJ_G0021242) #21 Aaas (MGP_SPRETEiJ_G0021241) #22 Myg1 (MGP_SPRETEiJ_G0021240) #24 Pfdn5 (MGP_SPRETEiJ_G0021239) #23 Espl1 (MGP_SPRETEiJ_G0021238) #25 Mfsd5 (MGP_SPRETEiJ_G0021237) #26 Rarg (MGP_SPRETEiJ_G0021236) #27 Itgb7 (MGP_SPRETEiJ_G0021235) #28 Zfp740 (MGP_SPRETEiJ_G0021234) #29 Csad (MGP_SPRETEiJ_G0021233) #30 Soat2 (MGP_SPRETEiJ_G0021232) #31 Igfbp6 (MGP_SPRETEiJ_G0021231) #32 Spryd3 (MGP_SPRETEiJ_G0021230) #33 Tns2 (MGP_SPRETEiJ_G0021229) #34 Eif4b (MGP_SPRETEiJ_G0021228) #35 Krt18 (MGP_SPRETEiJ_G0021227) #36 Krt8 (MGP_SPRETEiJ_G0021226) #37 Steppe mouse MODERN SPECIES 2542 Atf7 (ENSMSIG00000025119) #11 ENSMSIG00000025180 Npff (ENSMSIG00000025187) #13 ENSMSIG00000025203 #14 Map3k12 (ENSMSIG00000025260) #16 Gm10337 (ENSMSIG00000025299) #15 ENSMSIG00000025304 #17 ENSMSIG00000025400 Amhr2 (ENSMSIG00000025424) #19 Sp1 (ENSMSIG00000025451) #20 ENSMSIG00000025505 Sp7 (ENSMSIG00000025533) #21 Aaas (ENSMSIG00000025551) #22 Myg1 (ENSMSIG00000025575) #24 Pfdn5 (ENSMSIG00000025610) #23 Espl1 (ENSMSIG00000025644) #25 Mfsd5 (ENSMSIG00000025738) #26 Gm9918 (ENSMSIG00000025744) Rarg (ENSMSIG00000025751) #27 Itgb7 (ENSMSIG00000025781) #28 Zfp740 (ENSMSIG00000025809) #29 Csad (ENSMSIG00000025844) #30 Igfbp6 (ENSMSIG00000025891) #32 Spryd3 (ENSMSIG00000025900) #33 ENSMSIG00000025921 #34 Ryukyu mouse MODERN SPECIES 6 Hoxc12 (MGP_CAROLIEiJ_G0020363) #7 Hoxc13 (MGP_CAROLIEiJ_G0020362) #8 Calcoco1 (MGP_CAROLIEiJ_G0020361) #9 Atp5g2 (MGP_CAROLIEiJ_G0020360) #10 MGP_CAROLIEiJ_G0020359 #11 MGP_CAROLIEiJ_G0020358 #11 Npff (MGP_CAROLIEiJ_G0020357) #13 Tarbp2 (MGP_CAROLIEiJ_G0020356) #14 Gm10337 (MGP_CAROLIEiJ_G0020355) #15 MGP_CAROLIEiJ_G0020354 Pcbp2 (MGP_CAROLIEiJ_G0020353) #17 Prr13 (MGP_CAROLIEiJ_G0020352) Amhr2 (MGP_CAROLIEiJ_G0020351) #19 MGP_CAROLIEiJ_G0020350 #20 Sp7 (MGP_CAROLIEiJ_G0020349) #21 Aaas (MGP_CAROLIEiJ_G0020348) #22 Myg1 (MGP_CAROLIEiJ_G0020347) #24 Pfdn5 (MGP_CAROLIEiJ_G0020346) #23 Espl1 (MGP_CAROLIEiJ_G0020345) #25 Mfsd5 (MGP_CAROLIEiJ_G0020344) #26 Rarg (MGP_CAROLIEiJ_G0020343) #27 Itgb7 (MGP_CAROLIEiJ_G0020342) #28 Zfp740 (MGP_CAROLIEiJ_G0020341) #29 Csad (MGP_CAROLIEiJ_G0020340) #30 Soat2 (MGP_CAROLIEiJ_G0020339) #31 Igfbp6 (MGP_CAROLIEiJ_G0020338) #32 Spryd3 (MGP_CAROLIEiJ_G0020337) #33 Tns2 (MGP_CAROLIEiJ_G0020336) #34 Eif4b (MGP_CAROLIEiJ_G0020335) #35 Krt18 (MGP_CAROLIEiJ_G0020334) #36 Krt8 (MGP_CAROLIEiJ_G0020333) #37 Shrew mouse MODERN SPECIES 8 Hoxc12 (MGP_PahariEiJ_G0020362) #7 Hoxc13 (MGP_PahariEiJ_G0020361) #8 Calcoco1 (MGP_PahariEiJ_G0020360) #9 Atp5g2 (MGP_PahariEiJ_G0020359) #10 MGP_PahariEiJ_G0020358 #11 MGP_PahariEiJ_G0020357 #11 Npff (MGP_PahariEiJ_G0020356) #13 Tarbp2 (MGP_PahariEiJ_G0020355) #14 Gm10337 (MGP_PahariEiJ_G0020354) #15 Map3k12 (MGP_PahariEiJ_G0020353) #16 MGP_PahariEiJ_G0020352 #17 Prr13 (MGP_PahariEiJ_G0020351) Amhr2 (MGP_PahariEiJ_G0020350) #19 Sp1 (MGP_PahariEiJ_G0020349) #20 Sp7 (MGP_PahariEiJ_G0020348) #21 Aaas (MGP_PahariEiJ_G0020347) #22 Myg1 (MGP_PahariEiJ_G0020346) #24 Pfdn5 (MGP_PahariEiJ_G0020345) #23 Espl1 (MGP_PahariEiJ_G0020344) #25 Mfsd5 (MGP_PahariEiJ_G0020343) #26 Rarg (MGP_PahariEiJ_G0020342) #27 Itgb7 (MGP_PahariEiJ_G0020341) #28 Zfp740 (MGP_PahariEiJ_G0020340) #29 Csad (MGP_PahariEiJ_G0020339) #30 MGP_PahariEiJ_G0020338 #31 Igfbp6 (MGP_PahariEiJ_G0020337) #32 Spryd3 (MGP_PahariEiJ_G0020336) #33 Tns2 (MGP_PahariEiJ_G0020335) #34 MGP_PahariEiJ_G0020334 #35 Krt18 (MGP_PahariEiJ_G0020333) #36 Krt8 (MGP_PahariEiJ_G0020332) #37 Rat MODERN SPECIES 17 Hoxc11 (ENSRNOG00000016141) Hoxc12 (ENSRNOG00000016116) #7 Hoxc13 (ENSRNOG00000028679) #8 AABR07058934.1 (ENSRNOG00000016100) Calcoco1 (ENSRNOG00000015447) #9 Atp5mc2 (ENSRNOG00000015320) #10 Atf7 (ENSRNOG00000015269) #11 Tarbp2 (ENSRNOG00000042355) #14 Gm10337 (ENSRNOG00000063518) #15 Map3k12 (ENSRNOG00000015134) #16 Pcbp2 (ENSRNOG00000036852) #17 Prr13 (ENSRNOG00000042094) Amhr2 (ENSRNOG00000014850) #19 Sp1 (ENSRNOG00000014084) #20 Sp7 (ENSRNOG00000014082) #21 Aaas (ENSRNOG00000013445) #22 Myg1 (ENSRNOG00000013343) #24 Pfdn5 (ENSRNOG00000012985) #23 Espl1 (ENSRNOG00000012835) #25 Mfsd5 (ENSRNOG00000012832) #26 Gm9918 (ENSRNOG00000062295) Rarg (ENSRNOG00000012499) #27 Itgb7 (ENSRNOG00000012208) #28 Znf740 (ENSRNOG00000012192) #29 Csad (ENSRNOG00000011573) #30 Soat2 (ENSRNOG00000053769) #31 Igfbp6 (ENSRNOG00000010977) #32 Spryd3 (ENSRNOG00000010793) #33 Tns2 (ENSRNOG00000010588) #34 Krt18 (ENSRNOG00000047393) #36 Krt8 (ENSRNOG00000009779) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 441 Hoxc11 (ENSNGAG00000022627) Hoxc12 (ENSNGAG00000022515) #7 Hoxc13 (ENSNGAG00000022328) #8 Calcoco1 (ENSNGAG00000022012) #9 ENSNGAG00000020790 #10 Atf7 (ENSNGAG00000018161) #11 ENSNGAG00000016268 #12 Npff (ENSNGAG00000019691) #13 ENSNGAG00000017769 #14 Map3k12 (ENSNGAG00000017001) #16 Pcbp2 (ENSNGAG00000012054) #17 Prr13 (ENSNGAG00000007574) Amhr2 (ENSNGAG00000004072) #19 Sp1 (ENSNGAG00000021540) #20 Sp7 (ENSNGAG00000023698) #21 Aaas (ENSNGAG00000017125) #22 Myg1 (ENSNGAG00000014076) #24 Pfdn5 (ENSNGAG00000000684) #23 Espl1 (ENSNGAG00000012909) #25 ENSNGAG00000006649 Mfsd5 (ENSNGAG00000020403) #26 Rarg (ENSNGAG00000003866) #27 Itgb7 (ENSNGAG00000017710) #28 Zfp740 (ENSNGAG00000014852) #29 Csad (ENSNGAG00000012528) #30 Soat2 (ENSNGAG00000015773) #31 Igfbp6 (ENSNGAG00000015002) #32 Spryd3 (ENSNGAG00000012021) #33 Tns2 (ENSNGAG00000003782) #34 Eif4b (ENSNGAG00000012353) #35 ENSNGAG00000010448 #36 Kangaroo rat MODERN SPECIES 474 Hoxc10 (ENSDORG00000006992) Hoxc11 (ENSDORG00000006990) Hoxc12 (ENSDORG00000026466) #7 Hoxc13 (ENSDORG00000023942) #8 Calcoco1 (ENSDORG00000002957) #9 Atp5g2 (ENSDORG00000002955) #10 Atf7 (ENSDORG00000001395) #11 Npff (ENSDORG00000027814) #13 Tarbp2 (ENSDORG00000001390) #14 Map3k12 (ENSDORG00000001389) #16 Pcbp2 (ENSDORG00000001384) #17 ENSDORG00000024095 Amhr2 (ENSDORG00000010718) #19 Sp1 (ENSDORG00000027635) #20 Sp7 (ENSDORG00000028171) #21 Aaas (ENSDORG00000015337) #22 Myg1 (ENSDORG00000015335) #24 Pfdn5 (ENSDORG00000015334) #23 Espl1 (ENSDORG00000015325) #25 Mfsd5 (ENSDORG00000012006) #26 Rarg (ENSDORG00000016232) #27 Itgb7 (ENSDORG00000002970) #28 Zfp740 (ENSDORG00000025338) #29 Csad (ENSDORG00000011344) #30 Soat2 (ENSDORG00000015049) #31 Igfbp6 (ENSDORG00000015048) #32 Spryd3 (ENSDORG00000015045) #33 Tns2 (ENSDORG00000015042) #34 ENSDORG00000004008 ##35 Krt18 (ENSDORG00000012109) #36 Krt8 (ENSDORG00000024873) #37 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m.y #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 ENSGT00940000153339.b #37 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00900000143176 #12 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00520000058554 #15 ENSGT00940000154129.m.y #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 ENSGT00940000153339.b.u #37 Hystricomorpha_b ANCESTRAL SPECIES 53 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129.m.y #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 ENSGT00940000153339.b.u #37 Long-tailed chinchilla MODERN SPECIES 165 HOXC10 (ENSCLAG00000010877) HOXC11 (ENSCLAG00000010432) HOXC12 (ENSCLAG00000012849) #7 HOXC13 (ENSCLAG00000012400) #8 CALCOCO1 (ENSCLAG00000008505) #9 ENSCLAG00000010492 ATF7 (ENSCLAG00000009615) #11 NPFF (ENSCLAG00000007501) #13 TARBP2 (ENSCLAG00000009175) #14 MAP3K12 (ENSCLAG00000007958) #16 ENSCLAG00000012230 #17 ENSCLAG00000011497 AMHR2 (ENSCLAG00000010183) #19 SP1 (ENSCLAG00000007425) #20 SP7 (ENSCLAG00000012354) #21 AAAS (ENSCLAG00000010660) #22 MYG1 (ENSCLAG00000012669) #24 PFDN5 (ENSCLAG00000012087) #23 ESPL1 (ENSCLAG00000007332) #25 MFSD5 (ENSCLAG00000010550) #26 RARG (ENSCLAG00000007433) #27 ITGB7 (ENSCLAG00000009316) #28 ZNF740 (ENSCLAG00000010938) #29 CSAD (ENSCLAG00000009330) #30 SOAT2 (ENSCLAG00000014123) #31 IGFBP6 (ENSCLAG00000011244) #32 SPRYD3 (ENSCLAG00000009291) #33 TNS2 (ENSCLAG00000009285) #34 ENSCLAG00000013741 #35 KRT18 (ENSCLAG00000016350) #36 KRT78 (ENSCLAG00000009595) Degu MODERN SPECIES 134 HOXC11 (ENSODEG00000013494) HOXC12 (ENSODEG00000013405) #7 HOXC13 (ENSODEG00000013741) #8 ENSODEG00000020085 CALCOCO1 (ENSODEG00000013989) #9 ENSODEG00000013371 ATF7 (ENSODEG00000014081) #11 ENSODEG00000013431 #12 TARBP2 (ENSODEG00000013413) #14 MAP3K12 (ENSODEG00000013787) #16 ENSODEG00000013186 #17 ENSODEG00000012995 AMHR2 (ENSODEG00000013644) #19 SP1 (ENSODEG00000013583) #20 SP7 (ENSODEG00000013161) #21 AAAS (ENSODEG00000012591) #22 MYG1 (ENSODEG00000013685) #24 ENSODEG00000013601 #23 ESPL1 (ENSODEG00000014509) #25 MFSD5 (ENSODEG00000014360) #26 RARG (ENSODEG00000012669) #27 ITGB7 (ENSODEG00000013660) #28 ZNF740 (ENSODEG00000014638) #29 CSAD (ENSODEG00000013041) #30 SOAT2 (ENSODEG00000013152) #31 IGFBP6 (ENSODEG00000013565) #32 SPRYD3 (ENSODEG00000012727) #33 TNS2 (ENSODEG00000014711) #34 ENSODEG00000012941 #35 ENSODEG00000012306 #36 ENSODEG00000013629 #37 Naked mole-rat female MODERN SPECIES 8 HOXC9 (ENSHGLG00000002316) HOXC10 (ENSHGLG00000002263) HOXC11 (ENSHGLG00000002244) HOXC12 (ENSHGLG00000002214) #7 HOXC13 (ENSHGLG00000001849) #8 CALCOCO1 (ENSHGLG00000001954) #9 ENSHGLG00000043196 ATF7 (ENSHGLG00000001620) #11 ENSHGLG00000048122 #13 ENSHGLG00000034619 #14 ENSHGLG00000045875 #14 MAP3K12 (ENSHGLG00000001148) #16 ENSHGLG00000001776 #17 SP1 (ENSHGLG00000001375) #20 SP7 (ENSHGLG00000000980) #21 AAAS (ENSHGLG00000002843) #22 ENSHGLG00000049848 #24 ENSHGLG00000039611 ENSHGLG00000044103 ENSHGLG00000049773 ENSHGLG00000032190 ENSHGLG00000002363 #23 ENSHGLG00000007558 #25 ENSHGLG00000019577 #26 ENSHGLG00000019365 #27 ITGB7 (ENSHGLG00000005533) #28 ZNF740 (ENSHGLG00000042228) #29 CSAD (ENSHGLG00000003514) #30 SOAT2 (ENSHGLG00000001722) #31 IGFBP6 (ENSHGLG00000003596) #32 SPRYD3 (ENSHGLG00000003437) #33 Sciuridae ANCESTRAL SPECIES 15 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 Marmotini ANCESTRAL SPECIES 19 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m.s #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00390000011010.b.u.a Marmotini_b ANCESTRAL SPECIES 11 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129.m.s #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00390000011010.b.u.a Arctic ground squirrel MODERN SPECIES 202 HOXC11 (ENSUPAG00010020543) HOXC12 (ENSUPAG00010020565) #7 HOXC13 (ENSUPAG00010020570) #8 CALCOCO1 (ENSUPAG00010020573) #9 ENSUPAG00010020616 #10 ATF7 (ENSUPAG00010020626) #11 NPFF (ENSUPAG00010020645) #13 TARBP2 (ENSUPAG00010020659) #14 MAP3K12 (ENSUPAG00010020680) #16 ENSUPAG00010020704 #15 ENSUPAG00010020714 #17 PRR13 (ENSUPAG00010020867) #18 AMHR2 (ENSUPAG00010020887) #19 SP1 (ENSUPAG00010020892) #20 SP7 (ENSUPAG00010020894) #21 AAAS (ENSUPAG00010020904) #22 MYG1 (ENSUPAG00010020913) #24 PFDN5 (ENSUPAG00010020941) #23 ESPL1 (ENSUPAG00010020953) #25 ENSUPAG00010020994 #26 ENSUPAG00010020996 RARG (ENSUPAG00010021002) #27 ITGB7 (ENSUPAG00010021024) #28 ZNF740 (ENSUPAG00010021056) #29 CSAD (ENSUPAG00010021094) #30 SOAT2 (ENSUPAG00010021116) #31 IGFBP6 (ENSUPAG00010021123) #32 SPRYD3 (ENSUPAG00010021124) #33 TNS2 (ENSUPAG00010021130) #34 ENSUPAG00010021155 #35 KRT18 (ENSUPAG00010021179) #36 Squirrel MODERN SPECIES 112 HOXC10 (ENSSTOG00000012545) HOXC11 (ENSSTOG00000028958) HOXC12 (ENSSTOG00000019478) #7 CALCOCO1 (ENSSTOG00000007150) #9 ATP5MC2 (ENSSTOG00000008217) #10 ATF7 (ENSSTOG00000006788) #11 NPFF (ENSSTOG00000032315) #13 TARBP2 (ENSSTOG00000003678) #14 ENSSTOG00000025374 #15 MAP3K12 (ENSSTOG00000023587) #16 ENSSTOG00000003635 #17 PRR13 (ENSSTOG00000003624) #18 AMHR2 (ENSSTOG00000003607) #19 SP1 (ENSSTOG00000005928) #20 SP7 (ENSSTOG00000025061) #21 AAAS (ENSSTOG00000004351) #22 MYG1 (ENSSTOG00000004332) #24 PFDN5 (ENSSTOG00000004313) #23 ESPL1 (ENSSTOG00000004238) #25 MFSD5 (ENSSTOG00000004229) #26 RARG (ENSSTOG00000021101) #27 ITGB7 (ENSSTOG00000011195) #28 ZNF740 (ENSSTOG00000011188) #29 CSAD (ENSSTOG00000011031) #30 SOAT2 (ENSSTOG00000011020) #31 IGFBP6 (ENSSTOG00000011018) #32 SPRYD3 (ENSSTOG00000006818) #33 TNS2 (ENSSTOG00000011007) #34 ENSSTOG00000006800 #35 ENSSTOG00000021011 KRT18 (ENSSTOG00000015587) #36 Alpin marmot MODERN SPECIES 34 HOXC11 (ENSMMMG00000003528) HOXC12 (ENSMMMG00000003500) #7 ENSMMMG00000003492 CALCOCO1 (ENSMMMG00000003404) #9 ATP5MC2 (ENSMMMG00000003392) #10 ATF7 (ENSMMMG00000003376) #11 NPFF (ENSMMMG00000003352) #13 TARBP2 (ENSMMMG00000003329) #14 ENSMMMG00000003318 #15 MAP3K12 (ENSMMMG00000003252) #16 ENSMMMG00000002876 #17 PRR13 (ENSMMMG00000002834) #18 AMHR2 (ENSMMMG00000002803) #19 SP1 (ENSMMMG00000002792) #20 SP7 (ENSMMMG00000002774) #21 AAAS (ENSMMMG00000002752) #22 PFDN5 (ENSMMMG00000002736) #23 MYG1 (ENSMMMG00000002670) #24 ESPL1 (ENSMMMG00000002554) #25 MFSD5 (ENSMMMG00000002535) #26 ENSMMMG00000002529 RARG (ENSMMMG00000002491) #27 ITGB7 (ENSMMMG00000002454) #28 ZNF740 (ENSMMMG00000002367) #29 CSAD (ENSMMMG00000002317) #30 SOAT2 (ENSMMMG00000002301) #31 IGFBP6 (ENSMMMG00000002295) #32 SPRYD3 (ENSMMMG00000002277) #33 TNS2 (ENSMMMG00000002139) #34 ENSMMMG00000002074 #35 ENSMMMG00000002067 Eurasian red squirrel MODERN SPECIES 14 HOXC8 (ENSSVLG00005024998) HOXC9 (ENSSVLG00005024979) HOXC10 (ENSSVLG00005024954) HOXC13 (ENSSVLG00005024880) #8 CALCOCO1 (ENSSVLG00005024843) #9 ENSSVLG00005024802 #10 ATF7 (ENSSVLG00005024779) #11 NPFF (ENSSVLG00005024757) #13 TARBP2 (ENSSVLG00005024730) #14 MAP3K12 (ENSSVLG00005024636) #16 ENSSVLG00005024125 #17 PRR13 (ENSSVLG00005024006) #18 AMHR2 (ENSSVLG00005023965) #19 SP1 (ENSSVLG00005023931) #20 SP7 (ENSSVLG00005023903) #21 AAAS (ENSSVLG00005023795) #22 MYG1 (ENSSVLG00005023737) #24 PFDN5 (ENSSVLG00005023667) #23 ESPL1 (ENSSVLG00005023501) #25 MFSD5 (ENSSVLG00005023473) #26 ENSSVLG00005023458 RARG (ENSSVLG00005023407) #27 ITGB7 (ENSSVLG00005023259) #28 ZNF740 (ENSSVLG00005023231) #29 CSAD (ENSSVLG00005023137) #30 SOAT2 (ENSSVLG00005023026) #31 ENSSVLG00005023005 #32 ENSSVLG00005022985 #32 SPRYD3 (ENSSVLG00005022945) #33 TNS2 (ENSSVLG00005022041) #34 ENSSVLG00005021941 Lagomorpha ANCESTRAL SPECIES 30 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.b #35 ENSGT00940000153309.d #36 ENSGT01070000255698 Rabbit MODERN SPECIES 15 HOXC10 (ENSOCUG00000015176) HOXC11 (ENSOCUG00000001159) HOXC12 (ENSOCUG00000001157) #7 CALCOCO1 (ENSOCUG00000008943) #9 ENSOCUG00000008933 ENSOCUG00000022568 ATF7 (ENSOCUG00000005707) #11 NPFF (ENSOCUG00000026663) #13 TARBP2 (ENSOCUG00000005700) #14 MAP3K12 (ENSOCUG00000005689) #16 PCBP2 (ENSOCUG00000022490) #17 ENSOCUG00000035898 AMHR2 (ENSOCUG00000004151) #19 SP1 (ENSOCUG00000004147) #20 SP7 (ENSOCUG00000003811) #21 AAAS (ENSOCUG00000011288) #22 MYG1 (ENSOCUG00000011280) #24 PFDN5 (ENSOCUG00000011275) #23 ESPL1 (ENSOCUG00000011244) #25 MFSD5 (ENSOCUG00000011242) #26 ENSOCUG00000001432 #27 ITGB7 (ENSOCUG00000001426) #28 ZNF740 (ENSOCUG00000001422) #29 ENSOCUG00000004445 CSAD (ENSOCUG00000001419) #30 SOAT2 (ENSOCUG00000001415) #31 IGFBP6 (ENSOCUG00000001412) #32 SPRYD3 (ENSOCUG00000016826) #33 ENSOCUG00000013484 #35 ENSOCUG00000027691 #36 ENSOCUG00000035148 Pika MODERN SPECIES 1328 ENSOPRG00000015704 #21 AAAS (ENSOPRG00000015680) #22 MYG1 (ENSOPRG00000015655) #24 PFDN5 (ENSOPRG00000015638) #23 ENSOPRG00000015584 #25 Tree shrew MODERN SPECIES 1927 AAAS (ENSTBEG00000016689) #22 MYG1 (ENSTBEG00000016469) #24 PFDN5 (ENSTBEG00000016436) #23 ESPL1 (ENSTBEG00000015912) #25 RARG (ENSTBEG00000015684) #27 ENSTBEG00000015560 ZNF740 (ENSTBEG00000015437) #29 CSAD (ENSTBEG00000015284) #30 Primates ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.c.b ##36 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.c.b ##36 Simiiformes ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.c.b.b ##36 Catarrhini ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.b ##35 ENSGT00940000153309.c.b.a.a ##36 Hominoidea ANCESTRAL SPECIES 5 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748.a #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00860000135570.a.a ENSGT00940000153336.e.a.a.a.a ##35 Hominidae ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748.a #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000153889.e.b.a.d.b.a ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.e ##35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748.a #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000153889.e.b.a.d.b.a ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00860000135570.a.a.c Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748.a #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000153889.e.b.a.d.b.a ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00860000135570.a.a.c Pan ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748.a #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000153889.e.b.a.d.b.a ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00860000135570.a.a.c Chimpanzee MODERN SPECIES 3 HOXC11 (ENSPTRG00000005027) HOXC12 (ENSPTRG00000005026) #7 HOXC13 (ENSPTRG00000005025) #8 CALCOCO1 (ENSPTRG00000005024) #9 ATP5MC2 (ENSPTRG00000005023) ATF7 (ENSPTRG00000005022) #11 NPFF (ENSPTRG00000005021) #13 TARBP2 (ENSPTRG00000005020) #14 MAP3K12 (ENSPTRG00000005019) #16 PCBP2 (ENSPTRG00000005018) #17 ENSPTRG00000049293 PRR13 (ENSPTRG00000029739) #18 AMHR2 (ENSPTRG00000005015) #19 SP1 (ENSPTRG00000005014) #20 SP7 (ENSPTRG00000050925) #21 AAAS (ENSPTRG00000005012) #22 MYG1 (ENSPTRG00000005011) #24 PFDN5 (ENSPTRG00000005010) #23 ESPL1 (ENSPTRG00000005009) #25 MFSD5 (ENSPTRG00000005008) #26 ENSPTRG00000050981 RARG (ENSPTRG00000005007) #27 ITGB7 (ENSPTRG00000005006) #28 ZNF740 (ENSPTRG00000005005) #29 CSAD (ENSPTRG00000005004) #30 ENSPTRG00000048517 ENSPTRG00000052178 SOAT2 (ENSPTRG00000005002) #31 IGFBP6 (ENSPTRG00000005001) #32 SPRYD3 (ENSPTRG00000005000) #33 TNS2 (ENSPTRG00000004999) #34 Bonobo MODERN SPECIES 3 HOXC10 (ENSPPAG00000035276) HOXC11 (ENSPPAG00000043277) HOXC12 (ENSPPAG00000029866) #7 HOXC13 (ENSPPAG00000035078) #8 CALCOCO1 (ENSPPAG00000029982) #9 ENSPPAG00000037762 ATF7 (ENSPPAG00000036335) #11 NPFF (ENSPPAG00000002483) #13 TARBP2 (ENSPPAG00000030429) #14 MAP3K12 (ENSPPAG00000040619) #16 ENSPPAG00000027632 #17 PRR13 (ENSPPAG00000035773) #18 AMHR2 (ENSPPAG00000027083) #19 SP1 (ENSPPAG00000031675) #20 SP7 (ENSPPAG00000031590) #21 AAAS (ENSPPAG00000043470) #22 MYG1 (ENSPPAG00000041478) #24 PFDN5 (ENSPPAG00000037126) #23 ESPL1 (ENSPPAG00000042460) #25 MFSD5 (ENSPPAG00000035626) #26 ENSPPAG00000025838 RARG (ENSPPAG00000028990) #27 ITGB7 (ENSPPAG00000037612) #28 ZNF740 (ENSPPAG00000030804) #29 CSAD (ENSPPAG00000042278) #30 ENSPPAG00000038939 SOAT2 (ENSPPAG00000040391) #31 IGFBP6 (ENSPPAG00000033673) #32 SPRYD3 (ENSPPAG00000027156) #33 TNS2 (ENSPPAG00000035457) #34 ENSPPAG00000041857 Human MODERN SPECIES 3 HOXC11 (ENSG00000123388) HOXC12 (ENSG00000123407) #7 HOXC13 (ENSG00000123364) #8 CALCOCO1 (ENSG00000012822) #9 ATP5MC2 (ENSG00000135390) #10 ATF7 (ENSG00000170653) #11 ATF7-NPFF (ENSG00000267281) NPFF (ENSG00000139574) #13 TARBP2 (ENSG00000139546) #14 MAP3K12 (ENSG00000139625) #16 PCBP2 (ENSG00000197111) #17 PRR13 (ENSG00000205352) #18 AMHR2 (ENSG00000135409) #19 SP1 (ENSG00000185591) #20 SP7 (ENSG00000170374) #21 AAAS (ENSG00000094914) #22 MYG1 (ENSG00000139637) #24 PFDN5 (ENSG00000123349) #23 ESPL1 (ENSG00000135476) #25 MFSD5 (ENSG00000182544) #26 ENSG00000283536 RARG (ENSG00000172819) #27 ITGB7 (ENSG00000139626) #28 ZNF740 (ENSG00000139651) #29 CSAD (ENSG00000139631) #30 SOAT2 (ENSG00000167780) #31 IGFBP6 (ENSG00000167779) #32 SPRYD3 (ENSG00000167778) #33 TNS2 (ENSG00000111077) #34 EIF4B (ENSG00000063046) ##35 KRT18 (ENSG00000111057) ##36 Gorilla MODERN SPECIES 3 HOXC10 (ENSGGOG00000001105) HOXC11 (ENSGGOG00000026566) HOXC12 (ENSGGOG00000023684) #7 HOXC13 (ENSGGOG00000015765) #8 CALCOCO1 (ENSGGOG00000011541) #9 ENSGGOG00000015641 ATF7 (ENSGGOG00000015195) #11 NPFF (ENSGGOG00000012647) #13 TARBP2 (ENSGGOG00000012637) #14 MAP3K12 (ENSGGOG00000012622) #16 PCBP2 (ENSGGOG00000012613) #17 PRR13 (ENSGGOG00000012608) #18 AMHR2 (ENSGGOG00000012599) #19 SP1 (ENSGGOG00000012593) #20 SP7 (ENSGGOG00000015818) #21 AAAS (ENSGGOG00000015799) #22 MYG1 (ENSGGOG00000015795) #24 PFDN5 (ENSGGOG00000026308) #23 ESPL1 (ENSGGOG00000001600) #25 MFSD5 (ENSGGOG00000004121) #26 ENSGGOG00000039229 RARG (ENSGGOG00000003215) #27 ITGB7 (ENSGGOG00000006795) #28 ZNF740 (ENSGGOG00000006790) #29 CSAD (ENSGGOG00000014976) #30 ENSGGOG00000024256 SOAT2 (ENSGGOG00000003146) #31 IGFBP6 (ENSGGOG00000003143) #32 SPRYD3 (ENSGGOG00000014874) #33 TNS2 (ENSGGOG00000014860) #34 EIF4B (ENSGGOG00000013695) ##35 Orangutan MODERN SPECIES 3 HOXC10 (ENSPPYG00000004591) ENSPPYG00000004590 HOXC12 (ENSPPYG00000004589) #7 HOXC13 (ENSPPYG00000004588) #8 CALCOCO1 (ENSPPYG00000004587) #9 ATP5MC2 (ENSPPYG00000004586) ATF7 (ENSPPYG00000004585) #11 NPFF (ENSPPYG00000004584) #13 TARBP2 (ENSPPYG00000004583) #14 MAP3K12 (ENSPPYG00000004582) #16 PCBP2 (ENSPPYG00000004581) #17 PRR13 (ENSPPYG00000034305) #18 AMHR2 (ENSPPYG00000004580) #19 SP1 (ENSPPYG00000004579) #20 SP7 (ENSPPYG00000040679) #21 AAAS (ENSPPYG00000004577) #22 MYG1 (ENSPPYG00000004576) #24 PFDN5 (ENSPPYG00000004575) #23 ESPL1 (ENSPPYG00000004574) #25 MFSD5 (ENSPPYG00000004573) #26 ENSPPYG00000039523 RARG (ENSPPYG00000004572) #27 ITGB7 (ENSPPYG00000004571) #28 ZNF740 (ENSPPYG00000035927) #29 CSAD (ENSPPYG00000004569) #30 ENSPPYG00000040758 SOAT2 (ENSPPYG00000004568) #31 ENSPPYG00000004567 #32 SPRYD3 (ENSPPYG00000004566) #33 TNS2 (ENSPPYG00000004565) #34 ENSPPYG00000025848 ##35 Gibbon MODERN SPECIES 1 HOXC10 (ENSNLEG00000017679) ENSNLEG00000035339 HOXC12 (ENSNLEG00000017683) #7 HOXC13 (ENSNLEG00000017680) #8 CALCOCO1 (ENSNLEG00000017685) #9 ENSNLEG00000017686 ENSNLEG00000017688 #11 NPFF (ENSNLEG00000017689) #13 TARBP2 (ENSNLEG00000017690) #14 MAP3K12 (ENSNLEG00000017692) #16 PCBP2 (ENSNLEG00000017693) #17 PRR13 (ENSNLEG00000034057) #18 AMHR2 (ENSNLEG00000017698) #19 SP1 (ENSNLEG00000017699) #20 SP7 (ENSNLEG00000017701) #21 AAAS (ENSNLEG00000017702) #22 MYG1 (ENSNLEG00000017704) #24 PFDN5 (ENSNLEG00000017706) #23 ESPL1 (ENSNLEG00000017709) #25 MFSD5 (ENSNLEG00000017713) #26 ENSNLEG00000031387 RARG (ENSNLEG00000017714) #27 ITGB7 (ENSNLEG00000017715) #28 ZNF740 (ENSNLEG00000017717) #29 CSAD (ENSNLEG00000017718) #30 ENSNLEG00000029784 SOAT2 (ENSNLEG00000017720) #31 IGFBP6 (ENSNLEG00000017722) #32 SPRYD3 (ENSNLEG00000017724) #33 TNS2 (ENSNLEG00000017725) #34 EIF4B (ENSNLEG00000017727) ##35 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000008783.l #23 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.b ##35 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000008783.l #23 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.b ##35 Vervet Monkey MODERN SPECIES 2 HOXC10 (ENSCSAG00000005455) HOXC11 (ENSCSAG00000005457) HOXC12 (ENSCSAG00000005459) #7 HOXC13 (ENSCSAG00000005461) #8 CALCOCO1 (ENSCSAG00000005466) #9 ENSCSAG00000005468 ATF7 (ENSCSAG00000005473) #11 NPFF (ENSCSAG00000005475) #13 TARBP2 (ENSCSAG00000005479) #14 MAP3K12 (ENSCSAG00000005483) #16 ENSCSAG00000005487 #17 PRR13 (ENSCSAG00000005490) #18 AMHR2 (ENSCSAG00000005495) #19 SP1 (ENSCSAG00000005498) #20 SP7 (ENSCSAG00000019258) #21 ENSCSAG00000005499 #22 PFDN5 (ENSCSAG00000005502) #23 MYG1 (ENSCSAG00000005511) #24 ESPL1 (ENSCSAG00000005520) #25 MFSD5 (ENSCSAG00000019257) #26 RARG (ENSCSAG00000005525) #27 ITGB7 (ENSCSAG00000005529) #28 ZNF740 (ENSCSAG00000005533) #29 CSAD (ENSCSAG00000005538) #30 SOAT2 (ENSCSAG00000005549) #31 IGFBP6 (ENSCSAG00000005554) #32 SPRYD3 (ENSCSAG00000005555) #33 TNS2 (ENSCSAG00000005561) #34 EIF4B (ENSCSAG00000005574) ##35 ENSCSAG00000005581 ##36 KRT78 (ENSCSAG00000005588) Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.b ##35 ENSGT00940000153309.c.b.a.a.b.b ##36 Macaca ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.b ##35 ENSGT00940000153309.c.b.a.a.b.a.b.a.b.a.b.a.a.b ##36 Macaca_a ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.c.b.a.a.b.a.b.a.a ##36 Crab-eating macaque MODERN SPECIES 2 ENSMFAG00000039005 HOXC12 (ENSMFAG00000002263) #7 HOXC13 (ENSMFAG00000062591) #8 ENSMFAG00000043577 CALCOCO1 (ENSMFAG00000002103) #9 ENSMFAG00000045028 ATF7 (ENSMFAG00000002429) #11 NPFF (ENSMFAG00000007389) #13 TARBP2 (ENSMFAG00000013567) #14 MAP3K12 (ENSMFAG00000043896) #16 ENSMFAG00000044356 #17 PRR13 (ENSMFAG00000040262) #18 AMHR2 (ENSMFAG00000040829) #19 SP1 (ENSMFAG00000045267) #20 SP7 (ENSMFAG00000048583) #21 AAAS (ENSMFAG00000039804) #22 MYG1 (ENSMFAG00000031782) #24 PFDN5 (ENSMFAG00000003143) #23 ESPL1 (ENSMFAG00000031428) #25 MFSD5 (ENSMFAG00000045867) #26 RARG (ENSMFAG00000016523) #27 ITGB7 (ENSMFAG00000044578) #28 ZNF740 (ENSMFAG00000051716) #29 CSAD (ENSMFAG00000031711) #30 ENSMFAG00000059940 ENSMFAG00000057147 SOAT2 (ENSMFAG00000033078) #31 IGFBP6 (ENSMFAG00000000085) #32 SPRYD3 (ENSMFAG00000033467) #33 TNS2 (ENSMFAG00000032151) #34 EIF4B (ENSMFAG00000037195) ##35 Rhesus MODERN SPECIES 2 HOXC9 (ENSMMUG00000063144) HOXC10 (ENSMMUG00000000925) HOXC11 (ENSMMUG00000000924) HOXC12 (ENSMMUG00000004541) #7 HOXC13 (ENSMMUG00000054600) #8 CALCOCO1 (ENSMMUG00000009457) #9 ATP5MC2 (ENSMMUG00000016241) ATF7 (ENSMMUG00000022313) #11 TARBP2 (ENSMMUG00000018492) #14 MAP3K12 (ENSMMUG00000006613) #16 ENSMMUG00000006608 #17 PRR13 (ENSMMUG00000017738) #18 AMHR2 (ENSMMUG00000020037) #19 SP1 (ENSMMUG00000020036) #20 SP7 (ENSMMUG00000052817) #21 AAAS (ENSMMUG00000022036) #22 MYG1 (ENSMMUG00000022034) #24 PFDN5 (ENSMMUG00000022030) #23 ESPL1 (ENSMMUG00000022021) #25 MFSD5 (ENSMMUG00000022020) #26 ENSMMUG00000065110 RARG (ENSMMUG00000022017) #27 ITGB7 (ENSMMUG00000005245) #28 ZNF740 (ENSMMUG00000005246) #29 CSAD (ENSMMUG00000015153) #30 SOAT2 (ENSMMUG00000020339) #31 IGFBP6 (ENSMMUG00000051123) #32 SPRYD3 (ENSMMUG00000000329) #33 TNS2 (ENSMMUG00000000318) #34 EIF4B (ENSMMUG00000001062) ##35 ENSMMUG00000031911 ##36 Pig-tailed macaque MODERN SPECIES 526 HOXC11 (ENSMNEG00000041343) HOXC12 (ENSMNEG00000028886) #7 HOXC13 (ENSMNEG00000044057) #8 ENSMNEG00000028594 CALCOCO1 (ENSMNEG00000044215) #9 ENSMNEG00000039677 ATF7 (ENSMNEG00000042742) #11 NPFF (ENSMNEG00000043486) #13 TARBP2 (ENSMNEG00000036477) #14 MAP3K12 (ENSMNEG00000038360) #16 ENSMNEG00000031958 #17 PRR13 (ENSMNEG00000029804) #18 AMHR2 (ENSMNEG00000042822) #19 SP1 (ENSMNEG00000041302) #20 SP7 (ENSMNEG00000030296) #21 AAAS (ENSMNEG00000028301) #22 MYG1 (ENSMNEG00000041952) #24 ENSMNEG00000038567 #23 ESPL1 (ENSMNEG00000039047) #25 MFSD5 (ENSMNEG00000045251) #26 RARG (ENSMNEG00000031617) #27 ITGB7 (ENSMNEG00000029882) #28 ZNF740 (ENSMNEG00000038972) #29 CSAD (ENSMNEG00000029398) #30 SOAT2 (ENSMNEG00000038339) #31 IGFBP6 (ENSMNEG00000041594) #32 SPRYD3 (ENSMNEG00000040414) #33 TNS2 (ENSMNEG00000031140) #34 ENSMNEG00000029195 ##35 ENSMNEG00000037680 ##36 ENSMNEG00000041804 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.a ##35 ENSGT00940000153309.c.b.a.a.b.b ##36 ENSGT01040000241613 Olive baboon MODERN SPECIES 19 HOXC11 (ENSPANG00000016365) HOXC12 (ENSPANG00000010379) #7 HOXC13 (ENSPANG00000002383) #8 CALCOCO1 (ENSPANG00000011373) #9 ENSPANG00000014072 ATF7 (ENSPANG00000013986) #11 NPFF (ENSPANG00000013483) #13 TARBP2 (ENSPANG00000010689) #14 AMHR2 (ENSPANG00000017127) #19 PRR13 (ENSPANG00000022134) #18 PCBP2 (ENSPANG00000029560) #17 MAP3K12 (ENSPANG00000020580) #16 SP1 (ENSPANG00000018241) #20 ENSPANG00000049962 SP7 (ENSPANG00000014421) #21 AAAS (ENSPANG00000012540) #22 MYG1 (ENSPANG00000012627) #24 PFDN5 (ENSPANG00000005796) #23 ESPL1 (ENSPANG00000022963) #25 MFSD5 (ENSPANG00000002873) #26 ENSPANG00000037729 ENSPANG00000041548 RARG (ENSPANG00000022411) #27 ITGB7 (ENSPANG00000013193) #28 ZNF740 (ENSPANG00000018242) #29 CSAD (ENSPANG00000020843) #30 SOAT2 (ENSPANG00000014885) #31 IGFBP6 (ENSPANG00000004243) #32 ENSPANG00000014458 ##35 TNS2 (ENSPANG00000014073) #34 SPRYD3 (ENSPANG00000011605) #33 Cercopithecinae_d ANCESTRAL SPECIES 3 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.a ##35 ENSGT00940000153309.c.b.a.a.b.b ##36 ENSGT01040000241613 Sooty mangabey MODERN SPECIES 571 HOXC6 (ENSCATG00000004493) HOXC8 (ENSCATG00000043163) HOXC12 (ENSCATG00000041764) #7 HOXC13 (ENSCATG00000013447) #8 CALCOCO1 (ENSCATG00000029411) #9 ENSCATG00000031402 ATF7 (ENSCATG00000016814) #11 NPFF (ENSCATG00000043924) #13 TARBP2 (ENSCATG00000026344) #14 MAP3K12 (ENSCATG00000038068) #16 PCBP2 (ENSCATG00000036013) #17 PRR13 (ENSCATG00000043426) #18 AMHR2 (ENSCATG00000002460) #19 SP1 (ENSCATG00000017070) #20 SP7 (ENSCATG00000035712) #21 AAAS (ENSCATG00000043842) #22 MYG1 (ENSCATG00000041234) #24 ENSCATG00000041179 #23 ESPL1 (ENSCATG00000040354) #25 MFSD5 (ENSCATG00000042670) #26 RARG (ENSCATG00000038973) #27 ITGB7 (ENSCATG00000039968) #28 ZNF740 (ENSCATG00000034973) #29 CSAD (ENSCATG00000024517) #30 SOAT2 (ENSCATG00000030834) #31 IGFBP6 (ENSCATG00000001828) #32 SPRYD3 (ENSCATG00000042509) #33 TNS2 (ENSCATG00000039493) #34 ENSCATG00000032007 ##35 ENSCATG00000009708 ##36 ENSCATG00000039075 Drill MODERN SPECIES 235 SP1 (ENSMLEG00000042683) #20 SP7 (ENSMLEG00000029733) #21 AAAS (ENSMLEG00000037326) #22 MYG1 (ENSMLEG00000043408) #24 ENSMLEG00000034937 #23 ESPL1 (ENSMLEG00000016446) #25 MFSD5 (ENSMLEG00000036087) #26 RARG (ENSMLEG00000025257) #27 ITGB7 (ENSMLEG00000023677) #28 ZNF740 (ENSMLEG00000007040) #29 CSAD (ENSMLEG00000039097) #30 SOAT2 (ENSMLEG00000039805) #31 IGFBP6 (ENSMLEG00000033891) #32 SPRYD3 (ENSMLEG00000038760) #33 TNS2 (ENSMLEG00000035686) #34 EIF4B (ENSMLEG00000023226) ##35 ENSMLEG00000037665 ##36 ENSMLEG00000043460 Rhinopithecus ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.k.a.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00860000135570.a.a.a ENSGT00860000135570.a.a.b ENSGT00940000153336.e.a.a.a.a ##35 Golden snub-nosed monkey MODERN SPECIES 1766 HOXC10 (ENSRROG00000043103) HOXC11 (ENSRROG00000045396) HOXC12 (ENSRROG00000039382) #7 HOXC13 (ENSRROG00000038970) #8 CALCOCO1 (ENSRROG00000035160) #9 ENSRROG00000017152 ATF7 (ENSRROG00000031964) #11 NPFF (ENSRROG00000042539) #13 TARBP2 (ENSRROG00000044783) #14 MAP3K12 (ENSRROG00000029455) #16 PCBP2 (ENSRROG00000041377) #17 ENSRROG00000043448 #18 AMHR2 (ENSRROG00000035137) #19 SP1 (ENSRROG00000029551) #20 SP7 (ENSRROG00000029296) #21 AAAS (ENSRROG00000040227) #22 MYG1 (ENSRROG00000030453) #24 ENSRROG00000042206 #23 ESPL1 (ENSRROG00000043464) #25 MFSD5 (ENSRROG00000037319) #26 RARG (ENSRROG00000034892) #27 ENSRROG00000007396 ITGB7 (ENSRROG00000028868) #28 ZNF740 (ENSRROG00000037136) #29 CSAD (ENSRROG00000036761) #30 SOAT2 (ENSRROG00000043344) #31 IGFBP6 (ENSRROG00000028720) #32 SPRYD3 (ENSRROG00000036435) #33 TNS2 (ENSRROG00000040696) #34 EIF4B (ENSRROG00000033336) ##35 ENSRROG00000038431 Black snub-nosed monkey MODERN SPECIES 2207 ENSRBIG00000043837 AMHR2 (ENSRBIG00000044077) #19 SP1 (ENSRBIG00000041532) #20 SP7 (ENSRBIG00000039181) #21 AAAS (ENSRBIG00000040686) #22 MYG1 (ENSRBIG00000033203) #24 ENSRBIG00000033437 #23 ESPL1 (ENSRBIG00000007935) #25 MFSD5 (ENSRBIG00000038377) #26 RARG (ENSRBIG00000027890) #27 ITGB7 (ENSRBIG00000034526) #28 ZNF740 (ENSRBIG00000029862) #29 CSAD (ENSRBIG00000043791) #30 SOAT2 (ENSRBIG00000041879) #31 IGFBP6 (ENSRBIG00000040978) #32 SPRYD3 (ENSRBIG00000038184) #33 TNS2 (ENSRBIG00000038773) #34 EIF4B (ENSRBIG00000043823) ##35 ENSRBIG00000030342 ENSRBIG00000033351 ##37 Platyrrhini ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.i.d #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.w #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.n #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.g ##35 ENSGT00940000153309.c.b.a.b.a.a.a.a ##36 Cebidae ANCESTRAL SPECIES 2 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.i.d #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.w #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.n.a.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.g ##35 ENSGT00940000153309.c.b.a.b.a.a.a.a ##36 Cebidae_a ANCESTRAL SPECIES 5 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.i.d.b #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.w #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.n.a.a.c #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a.g ##35 ENSGT00940000153309.c.b.a.b.a.a.a.a ##36 ENSGT01100000266501 Bolivian squirrel monkey MODERN SPECIES 153 HOXC9 (ENSSBOG00000027042) HOXC10 (ENSSBOG00000034914) HOXC11 (ENSSBOG00000031215) HOXC12 (ENSSBOG00000028822) #7 CALCOCO1 (ENSSBOG00000033966) #9 ENSSBOG00000012565 #10 ATF7 (ENSSBOG00000025454) #11 NPFF (ENSSBOG00000028463) #13 TARBP2 (ENSSBOG00000027305) #14 MAP3K12 (ENSSBOG00000035393) #16 PCBP2 (ENSSBOG00000020308) #17 PRR13 (ENSSBOG00000024818) #18 AMHR2 (ENSSBOG00000027918) #19 SP1 (ENSSBOG00000022096) #20 SP7 (ENSSBOG00000034582) #21 AAAS (ENSSBOG00000025082) #22 MYG1 (ENSSBOG00000011763) #24 ENSSBOG00000031586 #23 ESPL1 (ENSSBOG00000035678) #25 MFSD5 (ENSSBOG00000004420) #26 RARG (ENSSBOG00000033172) #27 ITGB7 (ENSSBOG00000022839) #28 ZNF740 (ENSSBOG00000034251) #29 CSAD (ENSSBOG00000023095) #30 SOAT2 (ENSSBOG00000034893) #31 IGFBP6 (ENSSBOG00000030141) #32 SPRYD3 (ENSSBOG00000022719) #33 TNS2 (ENSSBOG00000031927) #34 EIF4B (ENSSBOG00000026444) ##35 ENSSBOG00000035078 ##36 ENSSBOG00000020319 Capuchin MODERN SPECIES 285 HOXC10 (ENSCCAG00000037870) HOXC11 (ENSCCAG00000020099) HOXC12 (ENSCCAG00000035755) #7 HOXC13 (ENSCCAG00000023554) #8 CALCOCO1 (ENSCCAG00000035008) #9 ENSCCAG00000036221 #10 ATF7 (ENSCCAG00000034241) #11 NPFF (ENSCCAG00000034365) #13 TARBP2 (ENSCCAG00000033025) #14 MAP3K12 (ENSCCAG00000036528) #16 PCBP2 (ENSCCAG00000012038) #17 PRR13 (ENSCCAG00000036400) #18 AMHR2 (ENSCCAG00000023375) #19 SP1 (ENSCCAG00000038082) #20 SP7 (ENSCCAG00000032917) #21 AAAS (ENSCCAG00000032957) #22 MYG1 (ENSCCAG00000031836) #24 ENSCCAG00000037724 #23 ENSCCAG00000020775 ESPL1 (ENSCCAG00000024910) #25 MFSD5 (ENSCCAG00000029742) #26 RARG (ENSCCAG00000027904) #27 ITGB7 (ENSCCAG00000027453) #28 ZNF740 (ENSCCAG00000023745) #29 CSAD (ENSCCAG00000024214) #30 SOAT2 (ENSCCAG00000009578) #31 IGFBP6 (ENSCCAG00000035277) #32 SPRYD3 (ENSCCAG00000028334) #33 TNS2 (ENSCCAG00000032183) #34 ENSCCAG00000035872 ##35 ENSCCAG00000026462 ##36 Marmoset DUPLICATION Marmoset MODERN SPECIES 21 HOXC12 (ENSCJAG00000018806) #7 HOXC13 (ENSCJAG00000044250) #8 CALCOCO1 (ENSCJAG00000018726) #9 ENSCJAG00000086022 ATP5MC2 (ENSCJAG00000039433) #10 ATF7 (ENSCJAG00000018699) #11 NPFF (ENSCJAG00000018696) #13 TARBP2 (ENSCJAG00000018668) #14 MAP3K12 (ENSCJAG00000018634) #16 ENSCJAG00000018590 #17 ENSCJAG00000072130 #18 AMHR2 (ENSCJAG00000018563) #19 SP1 (ENSCJAG00000018553) #20 ENSCJAG00000041364 SP7 (ENSCJAG00000018549) #21 ENSCJAG00000018507 #22 MYG1 (ENSCJAG00000018493) #24 ENSCJAG00000018477 #23 ENSCJAG00000082926 ESPL1 (ENSCJAG00000018446) #25 MFSD5 (ENSCJAG00000018442) #26 ENSCJAG00000046838 RARG (ENSCJAG00000018408) #27 ITGB7 (ENSCJAG00000018387) #28 ZNF740 (ENSCJAG00000044519) #29 CSAD (ENSCJAG00000018351) #30 SOAT2 (ENSCJAG00000018319) #31 IGFBP6 (ENSCJAG00000018309) #32 SPRYD3 (ENSCJAG00000018286) #33 TNS2 (ENSCJAG00000018241) #34 EIF4B (ENSCJAG00000018176) ##35 Marmoset MODERN SPECIES 3 HNRNPF (ENSCJAG00000008291) RASGEF1A (ENSCJAG00000016210) CSGALNACT2 (ENSCJAG00000016195) RET (ENSCJAG00000016166) ENSCJAG00000070828 ENSCJAG00000045167 ENSCJAG00000082778 ENSCJAG00000064808 ENSCJAG00000054685 ENSCJAG00000082272 ENSCJAG00000066699 ENSCJAG00000071128 ENSCJAG00000070932 ENSCJAG00000021249 ENSCJAG00000072339 ENSCJAG00000000767 #22 ZNF37A (ENSCJAG00000079448) ENSCJAG00000067735 ZNF25 (ENSCJAG00000047737) ENSCJAG00000039609 ZNF248 (ENSCJAG00000048147) ENSCJAG00000046022 ZNF267 (ENSCJAG00000054634) ENSCJAG00000067358 AHSP (ENSCJAG00000000814) RUSF1 (ENSCJAG00000000816) SLC5A2 (ENSCJAG00000000834) TGFB1I1 (ENSCJAG00000000840) ARMC5 (ENSCJAG00000000862) ENSCJAG00000000876 ENSCJAG00000072621 Mas night monkey MODERN SPECIES 1031 HOXC11 (ENSANAG00000032883) HOXC12 (ENSANAG00000032833) #7 HOXC13 (ENSANAG00000032093) #8 CALCOCO1 (ENSANAG00000022801) #9 ENSANAG00000035655 #10 ATF7 (ENSANAG00000032521) #11 NPFF (ENSANAG00000031895) #13 TARBP2 (ENSANAG00000034453) #14 MAP3K12 (ENSANAG00000020253) #16 PCBP2 (ENSANAG00000032275) #17 PRR13 (ENSANAG00000026491) #18 AMHR2 (ENSANAG00000033465) #19 ENSANAG00000011194 SP1 (ENSANAG00000031483) #20 SP7 (ENSANAG00000020784) #21 AAAS (ENSANAG00000026936) #22 MYG1 (ENSANAG00000033276) #24 ENSANAG00000026581 ENSANAG00000036915 ESPL1 (ENSANAG00000022743) #25 MFSD5 (ENSANAG00000007415) #26 RARG (ENSANAG00000035586) #27 ITGB7 (ENSANAG00000030851) #28 ZNF740 (ENSANAG00000036013) #29 CSAD (ENSANAG00000026031) #30 SOAT2 (ENSANAG00000024453) #31 IGFBP6 (ENSANAG00000027039) #32 SPRYD3 (ENSANAG00000024966) #33 TNS2 (ENSANAG00000029871) #34 ENSANAG00000021956 ##35 ENSANAG00000024649 ##36 Tarsier MODERN SPECIES 2155 SP7 (ENSTSYG00000027614) #21 AAAS (ENSTSYG00000000735) #22 MYG1 (ENSTSYG00000000734) #24 PFDN5 (ENSTSYG00000031479) #23 ESPL1 (ENSTSYG00000011226) #25 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.d #36 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.d #36 Mouse lemur MODERN SPECIES 29 HOXC12 (ENSMICG00000011709) #7 HOXC13 (ENSMICG00000042545) #8 CALCOCO1 (ENSMICG00000011694) #9 ENSMICG00000011686 ENSMICG00000045673 ATF7 (ENSMICG00000011677) #11 NPFF (ENSMICG00000047279) #13 TARBP2 (ENSMICG00000027441) #14 MAP3K12 (ENSMICG00000011662) #16 ENSMICG00000011651 #17 ENSMICG00000042073 AMHR2 (ENSMICG00000011633) #19 ENSMICG00000041676 #20 SP1 (ENSMICG00000035082) #20 SP7 (ENSMICG00000038102) #21 AAAS (ENSMICG00000014285) #22 MYG1 (ENSMICG00000014281) #24 PFDN5 (ENSMICG00000014277) #23 ESPL1 (ENSMICG00000014243) #25 MFSD5 (ENSMICG00000014231) #26 RARG (ENSMICG00000014220) #27 ITGB7 (ENSMICG00000014197) #28 ZNF740 (ENSMICG00000014191) #29 CSAD (ENSMICG00000014180) #30 SOAT2 (ENSMICG00000014163) #31 IGFBP6 (ENSMICG00000041428) #32 SPRYD3 (ENSMICG00000014150) #33 TNS2 (ENSMICG00000014125) #34 ENSMICG00000033915 ##35 ENSMICG00000002255 #36 ENSMICG00000042427 Lemuriformes_a ANCESTRAL SPECIES 8 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.e.a.a.a.a ##35 ENSGT00940000153309.d #36 Coquerels sifaka MODERN SPECIES 91 HOXC10 (ENSPCOG00000017406) HOXC11 (ENSPCOG00000015117) HOXC12 (ENSPCOG00000024756) #7 HOXC13 (ENSPCOG00000027689) #8 CALCOCO1 (ENSPCOG00000028080) #9 ENSPCOG00000016053 ATF7 (ENSPCOG00000018139) #11 NPFF (ENSPCOG00000024092) #13 TARBP2 (ENSPCOG00000013102) #14 MAP3K12 (ENSPCOG00000027308) #16 PCBP2 (ENSPCOG00000025737) #17 PRR13 (ENSPCOG00000025138) #18 AMHR2 (ENSPCOG00000017741) #19 SP1 (ENSPCOG00000025912) #20 SP7 (ENSPCOG00000014948) #21 AAAS (ENSPCOG00000014719) #22 MYG1 (ENSPCOG00000026269) #24 PFDN5 (ENSPCOG00000020283) #23 ESPL1 (ENSPCOG00000016146) #25 MFSD5 (ENSPCOG00000003152) #26 RARG (ENSPCOG00000019459) #27 ITGB7 (ENSPCOG00000013758) #28 ZNF740 (ENSPCOG00000022742) #29 CSAD (ENSPCOG00000016019) #30 SOAT2 (ENSPCOG00000018664) #31 IGFBP6 (ENSPCOG00000014603) #32 SPRYD3 (ENSPCOG00000028428) #33 TNS2 (ENSPCOG00000027013) #34 ENSPCOG00000007039 ##35 ENSPCOG00000028253 #36 ENSPCOG00000022837 Greater bamboo lemur MODERN SPECIES 516 ATF7 (ENSPSMG00000018932) #11 NPFF (ENSPSMG00000018955) #13 TARBP2 (ENSPSMG00000018983) #14 MAP3K12 (ENSPSMG00000019104) #16 ENSPSMG00000019281 #17 PRR13 (ENSPSMG00000019577) #18 ENSPSMG00000019585 AMHR2 (ENSPSMG00000019625) #19 SP1 (ENSPSMG00000019633) #20 SP7 (ENSPSMG00000019647) #21 AAAS (ENSPSMG00000019719) #22 MYG1 (ENSPSMG00000019787) #24 PFDN5 (ENSPSMG00000019833) #23 ESPL1 (ENSPSMG00000019895) #25 MFSD5 (ENSPSMG00000019914) #26 ENSPSMG00000019918 RARG (ENSPSMG00000020029) #27 ITGB7 (ENSPSMG00000020120) #28 ZNF740 (ENSPSMG00000020129) #29 CSAD (ENSPSMG00000020166) #30 SOAT2 (ENSPSMG00000020201) #31 IGFBP6 (ENSPSMG00000020220) #32 SPRYD3 (ENSPSMG00000020290) #33 TNS2 (ENSPSMG00000020515) #34 ENSPSMG00000020651 Bushbaby MODERN SPECIES 158 HOXC8 (ENSOGAG00000003619) HOXC9 (ENSOGAG00000003616) HOXC10 (ENSOGAG00000003615) HOXC11 (ENSOGAG00000029804) HOXC12 (ENSOGAG00000025383) #7 HOXC13 (ENSOGAG00000030391) #8 CALCOCO1 (ENSOGAG00000003612) #9 ENSOGAG00000003611 ATF7 (ENSOGAG00000001748) #11 TARBP2 (ENSOGAG00000001744) #14 MAP3K12 (ENSOGAG00000001739) #16 PRR13 (ENSOGAG00000001734) #18 AMHR2 (ENSOGAG00000028440) #19 SP1 (ENSOGAG00000031759) #20 SP7 (ENSOGAG00000032371) #21 AAAS (ENSOGAG00000009477) #22 MYG1 (ENSOGAG00000009469) #24 ENSOGAG00000009463 #23 ESPL1 (ENSOGAG00000009447) #25 MFSD5 (ENSOGAG00000009445) #26 RARG (ENSOGAG00000026655) #27 ITGB7 (ENSOGAG00000014673) #28 ZNF740 (ENSOGAG00000025330) #29 CSAD (ENSOGAG00000005244) #30 SOAT2 (ENSOGAG00000005242) #31 IGFBP6 (ENSOGAG00000005239) #32 SPRYD3 (ENSOGAG00000012481) #33 TNS2 (ENSOGAG00000012472) #34 EIF4B (ENSOGAG00000012459) ##35 ENSOGAG00000006237 ENSOGAG00000032490 #36 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Eulipotyphla ANCESTRAL SPECIES 414 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 Common shrew MODERN SPECIES 1694 ENSSARG00000006254 #22 MYG1 (ENSSARG00000006241) #24 PFDN5 (ENSSARG00000006221) #23 Hedgehog MODERN SPECIES 2318 AAAS (ENSEEUG00000013994) #22 MYG1 (ENSEEUG00000013949) #24 ENSEEUG00000013930 #23 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Suina ANCESTRAL SPECIES 21 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 ENSGT01010000229947 Chacoan peccary MODERN SPECIES 900 HOXC10 (ENSCWAG00000014844) HOXC11 (ENSCWAG00000014873) HOXC12 (ENSCWAG00000014902) #7 HOXC13 (ENSCWAG00000014937) #8 CALCOCO1 (ENSCWAG00000014985) #9 ENSCWAG00000015074 ATF7 (ENSCWAG00000015117) #11 NPFF (ENSCWAG00000015156) #13 TARBP2 (ENSCWAG00000015198) #14 MAP3K12 (ENSCWAG00000015294) #16 PCBP2 (ENSCWAG00000015488) #17 PRR13 (ENSCWAG00000015767) #18 AMHR2 (ENSCWAG00000015809) #19 SP1 (ENSCWAG00000016036) #20 SP7 (ENSCWAG00000016057) #21 AAAS (ENSCWAG00000016123) #22 MYG1 (ENSCWAG00000016458) #24 PFDN5 (ENSCWAG00000016508) #23 ESPL1 (ENSCWAG00000016610) #25 MFSD5 (ENSCWAG00000016820) #26 Pig MODERN SPECIES 13 HOXC11 (ENSSSCG00000028104) HOXC12 (ENSSSCG00000000281) #7 HOXC13 (ENSSSCG00000000279) #8 CALCOCO1 (ENSSSCG00000028481) #9 ATP5MC2 (ENSSSCG00000062561) #10 ATF7 (ENSSSCG00000000278) #11 NPFF (ENSSSCG00000000277) #13 TARBP2 (ENSSSCG00000000276) #14 MAP3K12 (ENSSSCG00000000275) #16 PCBP2 (ENSSSCG00000000274) #17 PRR13 (ENSSSCG00000000273) #18 AMHR2 (ENSSSCG00000000271) #19 ENSSSCG00000049546 SP1 (ENSSSCG00000000272) #20 SP7 (ENSSSCG00000062878) #21 AAAS (ENSSSCG00000000268) #22 MYG1 (ENSSSCG00000046295) #24 PFDN5 (ENSSSCG00000000267) #23 ESPL1 (ENSSSCG00000000265) #25 MFSD5 (ENSSSCG00000000264) #26 RARG (ENSSSCG00000000258) #27 ITGB7 (ENSSSCG00000000257) #28 ZNF740 (ENSSSCG00000036564) #29 CSAD (ENSSSCG00000000259) #30 SOAT2 (ENSSSCG00000000260) #31 IGFBP6 (ENSSSCG00000000261) #32 SPRYD3 (ENSSSCG00000000262) #33 TNS2 (ENSSSCG00000000263) #34 EIF4B (ENSSSCG00000032028) #35 KRT18 (ENSSSCG00000000253) #36 ENSSSCG00000051741 Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000155255.r ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Cetacea ANCESTRAL SPECIES 8 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.c #10 ENSGT00940000155001.B.h.b.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000155255.r ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.n #35 ENSGT00940000153309.d.f #36 Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000157455.c #10 ENSGT00940000155261 #11 ENSGT00940000155001.B.h.b.b ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00390000007772.db.c.b ENSGT00390000007772.db.c.a ENSGT00390000007772.db.d ENSGT00940000155255.r ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.n #35 ENSGT00940000153309.d.f #36 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.c #10 ENSGT00940000155261 #11 ENSGT00940000155001.B.h.b.b ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.n #35 ENSGT00940000153309.d.f #36 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.c #10 ENSGT00940000155261 #11 ENSGT00940000155001.B.h.b.b ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.n #35 ENSGT00550000074912.g.a Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455.c #10 ENSGT00940000155261 #11 ENSGT00940000155001.B.h.b.b ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.n #35 ENSGT00550000074912.g.a ENSGT00940000153309.d.f #36 Narwhal MODERN SPECIES 313 HOXC11 (ENSMMNG00015015840) HOXC12 (ENSMMNG00015015809) #7 HOXC13 (ENSMMNG00015015786) #8 CALCOCO1 (ENSMMNG00015015727) #9 ENSMMNG00015015701 #10 ENSMMNG00015017394 ATF7 (ENSMMNG00015017347) #11 NPFF (ENSMMNG00015017292) #13 TARBP2 (ENSMMNG00015017195) #14 MAP3K12 (ENSMMNG00015017081) #16 PCBP2 (ENSMMNG00015016994) #17 PRR13 (ENSMMNG00015016930) #18 AMHR2 (ENSMMNG00015016804) #19 SP1 (ENSMMNG00015016728) #20 SP7 (ENSMMNG00015016703) #21 AAAS (ENSMMNG00015016590) #22 MYG1 (ENSMMNG00015016491) #24 PFDN5 (ENSMMNG00015016405) #23 ESPL1 (ENSMMNG00015016245) #25 MFSD5 (ENSMMNG00015016198) #26 RARG (ENSMMNG00015016062) #27 ITGB7 (ENSMMNG00015015947) #28 ZNF740 (ENSMMNG00015015890) #29 CSAD (ENSMMNG00015015824) #30 SOAT2 (ENSMMNG00015015735) #31 IGFBP6 (ENSMMNG00015015708) #32 SPRYD3 (ENSMMNG00015015677) #33 TNS2 (ENSMMNG00015015588) #34 EIF4B (ENSMMNG00015015515) #35 ENSMMNG00015015486 ENSMMNG00015015476 Beluga whale MODERN SPECIES 39 HOXC9 (ENSDLEG00000006790) HOXC10 (ENSDLEG00000006797) HOXC11 (ENSDLEG00000003644) HOXC12 (ENSDLEG00000003651) #7 HOXC13 (ENSDLEG00000003655) #8 CALCOCO1 (ENSDLEG00000003663) #9 ATF7 (ENSDLEG00000003680) #11 ENSDLEG00000003693 NPFF (ENSDLEG00000003697) #13 TARBP2 (ENSDLEG00000003709) #14 MAP3K12 (ENSDLEG00000003715) #16 PRR13 (ENSDLEG00000003739) #17 AMHR2 (ENSDLEG00000003786) #19 SP1 (ENSDLEG00000003794) #20 SP7 (ENSDLEG00000003806) #21 AAAS (ENSDLEG00000003810) #22 CUNH12orf10 (ENSDLEG00000003824) #24 PFDN5 (ENSDLEG00000003832) #23 ESPL1 (ENSDLEG00000003868) #25 MFSD5 (ENSDLEG00000004023) #26 RARG (ENSDLEG00000004025) #27 ITGB7 (ENSDLEG00000004036) #28 ZNF740 (ENSDLEG00000004043) #29 CSAD (ENSDLEG00000004054) #30 SOAT2 (ENSDLEG00000004069) #31 IGFBP6 (ENSDLEG00000004084) #32 SPRYD3 (ENSDLEG00000004093) #33 TNS2 (ENSDLEG00000004106) #34 EIF4B (ENSDLEG00000004139) #35 ENSDLEG00000004153 KRT18 (ENSDLEG00000004159) #36 Vaquita MODERN SPECIES 1 HOXC11 (ENSPSNG00000015803) HOXC12 (ENSPSNG00000015844) #7 HOXC13 (ENSPSNG00000015899) #8 CALCOCO1 (ENSPSNG00000004212) #9 ENSPSNG00000004253 #10 ATF7 (ENSPSNG00000004293) #11 ENSPSNG00000004322 NPFF (ENSPSNG00000004338) #13 TARBP2 (ENSPSNG00000004360) #14 MAP3K12 (ENSPSNG00000004421) #16 PCBP2 (ENSPSNG00000004524) #17 PRR13 (ENSPSNG00000004650) #18 AMHR2 (ENSPSNG00000004719) #19 SP1 (ENSPSNG00000004798) #20 SP7 (ENSPSNG00000004847) #21 AAAS (ENSPSNG00000004913) #22 MYG1 (ENSPSNG00000004998) #24 PFDN5 (ENSPSNG00000005161) #23 ESPL1 (ENSPSNG00000005038) #25 MFSD5 (ENSPSNG00000005186) #26 ENSPSNG00000005203 RARG (ENSPSNG00000005237) #27 ITGB7 (ENSPSNG00000005404) #28 ZNF740 (ENSPSNG00000005501) #29 CSAD (ENSPSNG00000005543) #30 SOAT2 (ENSPSNG00000005621) #31 IGFBP6 (ENSPSNG00000005671) #32 SPRYD3 (ENSPSNG00000005703) #33 TNS2 (ENSPSNG00000005790) #34 EIF4B (ENSPSNG00000006000) #35 ENSPSNG00000006052 Dolphin MODERN SPECIES 878 SP7 (ENSTTRG00000002784) #21 AAAS (ENSTTRG00000002783) #22 MYG1 (ENSTTRG00000002782) #24 PFDN5 (ENSTTRG00000002781) #23 ESPL1 (ENSTTRG00000002780) #25 RARG (ENSTTRG00000002778) #27 ITGB7 (ENSTTRG00000002777) #28 ZNF740 (ENSTTRG00000002776) #29 CSAD (ENSTTRG00000002775) #30 SOAT2 (ENSTTRG00000002774) #31 IGFBP6 (ENSTTRG00000002773) #32 SPRYD3 (ENSTTRG00000002772) #33 TNS2 (ENSTTRG00000002771) #34 EIF4B (ENSTTRG00000002770) #35 Sperm whale MODERN SPECIES 17 HOXC12 (ENSPCTG00005008558) #7 HOXC13 (ENSPCTG00005008577) #8 ENSPCTG00005008605 ATP5MC2 (ENSPCTG00005008660) #10 ATF7 (ENSPCTG00005008736) #11 ENSPCTG00005008838 NPFF (ENSPCTG00005008851) #13 TARBP2 (ENSPCTG00005008878) #14 PCBP2 (ENSPCTG00005009053) #17 PRR13 (ENSPCTG00005009366) #18 ENSPCTG00005009457 AMHR2 (ENSPCTG00005009529) #19 SP1 (ENSPCTG00005009868) #20 ENSPCTG00005009901 SP7 (ENSPCTG00005009940) #21 AAAS (ENSPCTG00005010087) #22 C6H12orf10 (ENSPCTG00005010244) #24 PFDN5 (ENSPCTG00005010402) #23 ENSPCTG00005010522 RARG (ENSPCTG00005010616) #27 ITGB7 (ENSPCTG00005010788) #28 ZNF740 (ENSPCTG00005011077) #29 CSAD (ENSPCTG00005011166) #30 SOAT2 (ENSPCTG00005011541) #31 IGFBP6 (ENSPCTG00005011716) #32 SPRYD3 (ENSPCTG00005011783) #33 TNS2 (ENSPCTG00005011947) #34 EIF4B (ENSPCTG00005013255) #35 ENSPCTG00005013898 ENSPCTG00005013944 #36 ENSPCTG00005014251 Blue whale MODERN SPECIES 1 ENSBMSG00010008971 CALCOCO1 (ENSBMSG00010008941) #9 ENSBMSG00010008905 #10 ENSBMSG00010008895 ATF7 (ENSBMSG00010008868) #11 NPFF (ENSBMSG00010008841) #13 TARBP2 (ENSBMSG00010008807) #14 MAP3K12 (ENSBMSG00010008766) #16 PCBP2 (ENSBMSG00010008701) #17 PRR13 (ENSBMSG00010008673) #18 ENSBMSG00010008662 AMHR2 (ENSBMSG00010008612) #19 ENSBMSG00010008588 SP1 (ENSBMSG00010008563) #20 SP7 (ENSBMSG00010008549) #21 AAAS (ENSBMSG00010008504) #22 MYG1 (ENSBMSG00010008409) #24 PFDN5 (ENSBMSG00010008361) #23 ESPL1 (ENSBMSG00010008313) #25 MFSD5 (ENSBMSG00010008292) #26 RARG (ENSBMSG00010008243) #27 ITGB7 (ENSBMSG00010008198) #28 ZNF740 (ENSBMSG00010008171) #29 CSAD (ENSBMSG00010008143) #30 SOAT2 (ENSBMSG00010008108) #31 IGFBP6 (ENSBMSG00010008088) #32 SPRYD3 (ENSBMSG00010008059) #33 TNS2 (ENSBMSG00010007646) #34 EIF4B (ENSBMSG00010007537) #35 KRT18 (ENSBMSG00010007501) #36 ENSBMSG00010007486 Pecora ANCESTRAL SPECIES 3 ENSGT00940000161087 #8 ENSGT00940000154517.hb ENSGT00940000154940 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000155255.r ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Yarkand deer MODERN SPECIES 22 HOXC11 (ENSCHYG00000002704) HOXC12 (ENSCHYG00000002710) #7 HOXC13 (ENSCHYG00000002721) #8 ENSCHYG00000002730 ENSCHYG00000002740 CALCOCO1 (ENSCHYG00000002756) #9 ENSCHYG00000002802 ATF7 (ENSCHYG00000002814) #11 NPFF (ENSCHYG00000002830) #13 TARBP2 (ENSCHYG00000002847) #14 MAP3K12 (ENSCHYG00000002884) #16 ENSCHYG00000002986 #17 AMHR2 (ENSCHYG00000003480) #19 SP1 (ENSCHYG00000003580) #20 SP7 (ENSCHYG00000003603) #21 AAAS (ENSCHYG00000003635) #22 ENSCHYG00000003725 #23 MYG1 (ENSCHYG00000003771) #24 ESPL1 (ENSCHYG00000003808) #25 MFSD5 (ENSCHYG00000003855) #26 ENSCHYG00000003863 RARG (ENSCHYG00000000032) #27 ITGB7 (ENSCHYG00000000052) #28 ZNF740 (ENSCHYG00000000069) #29 CSAD (ENSCHYG00000000099) #30 SOAT2 (ENSCHYG00000000132) #31 IGFBP6 (ENSCHYG00000000153) #32 SPRYD3 (ENSCHYG00000000180) #33 TNS2 (ENSCHYG00000000253) #34 ENSCHYG00000000573 #35 ENSCHYG00000000689 #36 Percora_a ANCESTRAL SPECIES 3 ENSGT00940000154517.hb ENSGT00940000154940 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000155255.r ENSGT00730000111608.a #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000154517.hb ENSGT00940000154940 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000155255.r ENSGT00730000111608.a #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Bovinae ANCESTRAL SPECIES 17 ENSGT00940000161087 #8 ENSGT00940000154517.hb ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000155255.r ENSGT00730000111608.a #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Bos ANCESTRAL SPECIES 2 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154517.hb ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Bos_b ANCESTRAL SPECIES 4 ENSGT00940000161087 #8 ENSGT00940000154517.hb ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000155255.r ENSGT00730000111608.a #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Hybrid Bos Indicus MODERN SPECIES 24 HOXC11 (ENSBIXG00005013716) HOXC12 (ENSBIXG00005013757) #7 HOXC13 (ENSBIXG00005001711) #8 ENSBIXG00005013795 CALCOCO1 (ENSBIXG00005005927) #9 ENSBIXG00005014027 ATF7 (ENSBIXG00005014058) #11 NPFF (ENSBIXG00005014073) #13 TARBP2 (ENSBIXG00005014116) #14 MAP3K12 (ENSBIXG00005006369) #16 PCBP2 (ENSBIXG00005014274) #17 ENSBIXG00005007121 #18 ENSBIXG00005014381 SP1 (ENSBIXG00005014609) #20 SP7 (ENSBIXG00005014666) #21 AAAS (ENSBIXG00005002129) #22 MYG1 (ENSBIXG00005002148) #24 PFDN5 (ENSBIXG00005014918) #23 ESPL1 (ENSBIXG00005002191) #25 MFSD5 (ENSBIXG00005014976) #26 ENSBIXG00005014989 RARG (ENSBIXG00005015040) #27 ITGB7 (ENSBIXG00005015140) #28 CSAD (ENSBIXG00005002243) #30 SOAT2 (ENSBIXG00005006560) #31 IGFBP6 (ENSBIXG00005006436) #32 SPRYD3 (ENSBIXG00005015414) #33 TNS2 (ENSBIXG00005015711) #34 EIF4B (ENSBIXG00005000161) #35 ENSBIXG00005015865 KRT18 (ENSBIXG00005015883) #36 Cow MODERN SPECIES 24 HOXC11 (ENSBTAG00000006879) HOXC12 (ENSBTAG00000000924) #7 HOXC13 (ENSBTAG00000000923) #8 ENSBTAG00000052958 CALCOCO1 (ENSBTAG00000015016) #9 ATP5MC2 (ENSBTAG00000005735) ATF7 (ENSBTAG00000005863) #11 NPFF (ENSBTAG00000002401) #13 TARBP2 (ENSBTAG00000000435) #14 MAP3K12 (ENSBTAG00000020758) #16 PCBP2 (ENSBTAG00000020757) #17 PRR13 (ENSBTAG00000026916) #18 AMHR2 (ENSBTAG00000018524) #19 SP1 (ENSBTAG00000003021) #20 SP7 (ENSBTAG00000033292) #21 AAAS (ENSBTAG00000020179) #22 MYG1 (ENSBTAG00000020177) #24 PFDN5 (ENSBTAG00000008935) #23 ESPL1 (ENSBTAG00000008934) #25 MFSD5 (ENSBTAG00000008933) #26 RARG (ENSBTAG00000007592) #27 ITGB7 (ENSBTAG00000018993) #28 ZNF740 (ENSBTAG00000046481) #29 CSAD (ENSBTAG00000007829) #30 SOAT2 (ENSBTAG00000005623) #31 IGFBP6 (ENSBTAG00000021467) #32 SPRYD3 (ENSBTAG00000021464) #33 TNS2 (ENSBTAG00000006904) #34 EIF4B (ENSBTAG00000006883) #35 KRT18 (ENSBTAG00000001517) #36 KRT8 (ENSBTAG00000000836) #37 Bos_a ANCESTRAL SPECIES 3 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154517.hb ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.a.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Wild yak MODERN SPECIES 1370 CALCOCO1 (ENSBMUG00000021277) #9 ENSBMUG00000021320 ATF7 (ENSBMUG00000021354) #11 NPFF (ENSBMUG00000021363) #13 TARBP2 (ENSBMUG00000021375) #14 MAP3K12 (ENSBMUG00000021413) #16 PCBP2 (ENSBMUG00000021744) #17 ENSBMUG00000022042 #18 AMHR2 (ENSBMUG00000022128) #19 SP1 (ENSBMUG00000022146) #20 SP7 (ENSBMUG00000022156) #21 AAAS (ENSBMUG00000022211) #22 MYG1 (ENSBMUG00000022239) #24 PFDN5 (ENSBMUG00000022264) #23 ESPL1 (ENSBMUG00000022293) #25 MFSD5 (ENSBMUG00000022313) #26 ENSBMUG00000022324 RARG (ENSBMUG00000022368) #27 ITGB7 (ENSBMUG00000022408) #28 ENSBMUG00000022424 #29 CSAD (ENSBMUG00000022478) #30 SOAT2 (ENSBMUG00000022561) #31 ENSBMUG00000022571 #32 SPRYD3 (ENSBMUG00000022579) #33 TNS2 (ENSBMUG00000022663) #34 EIF4B (ENSBMUG00000022718) #35 KRT18 (ENSBMUG00000022735) #36 Domestic yak MODERN SPECIES 24 HOXC10 (ENSBGRG00000003864) HOXC9 (ENSBGRG00000003819) HOXC12 (ENSBGRG00000003794) #7 HOXC13 (ENSBGRG00000003766) #8 ENSBGRG00000003755 CALCOCO1 (ENSBGRG00000003673) #9 ENSBGRG00000003615 ATF7 (ENSBGRG00000003588) #11 NPFF (ENSBGRG00000003578) #13 TARBP2 (ENSBGRG00000003551) #14 MAP3K12 (ENSBGRG00000003502) #16 PCBP2 (ENSBGRG00000003386) #17 ENSBGRG00000003334 #18 SP1 (ENSBGRG00000003298) #20 SP7 (ENSBGRG00000003281) #21 AAAS (ENSBGRG00000003057) #22 MYG1 (ENSBGRG00000002968) #24 PFDN5 (ENSBGRG00000002918) #23 ESPL1 (ENSBGRG00000002871) #25 MFSD5 (ENSBGRG00000002864) #26 ENSBGRG00000002856 RARG (ENSBGRG00000002743) #27 ITGB7 (ENSBGRG00000002637) #28 ENSBGRG00000002603 #29 CSAD (ENSBGRG00000002515) #30 SOAT2 (ENSBGRG00000002467) #31 IGFBP6 (ENSBGRG00000002440) #32 SPRYD3 (ENSBGRG00000002401) #33 TNS2 (ENSBGRG00000001825) #34 EIF4B (ENSBGRG00000001634) #35 KRT18 (ENSBGRG00000001564) #36 American bison MODERN SPECIES 3297 HOXC12 (ENSBBBG00000004755) #7 HOXC13 (ENSBBBG00000004761) #8 ENSBBBG00000018889 CALCOCO1 (ENSBBBG00000004810) #9 ENSBBBG00000004822 ATF7 (ENSBBBG00000018999) #11 NPFF (ENSBBBG00000019006) #13 TARBP2 (ENSBBBG00000019042) #14 MAP3K12 (ENSBBBG00000019107) #16 PCBP2 (ENSBBBG00000019391) #17 ENSBBBG00000007514 #18 ENSBBBG00000005204 AMHR2 (ENSBBBG00000019512) #19 SP1 (ENSBBBG00000019533) #20 SP7 (ENSBBBG00000005289) #21 AAAS (ENSBBBG00000019621) #22 MYG1 (ENSBBBG00000005178) #24 PFDN5 (ENSBBBG00000019688) #23 ESPL1 (ENSBBBG00000019754) #25 MFSD5 (ENSBBBG00000006967) #26 ENSBBBG00000019765 RARG (ENSBBBG00000019817) #27 ITGB7 (ENSBBBG00000019882) #28 ZNF740 (ENSBBBG00000019895) #29 CSAD (ENSBBBG00000008174) #30 SOAT2 (ENSBBBG00000019978) #31 IGFBP6 (ENSBBBG00000005403) #32 SPRYD3 (ENSBBBG00000020007) #33 TNS2 (ENSBBBG00000020200) #34 EIF4B (ENSBBBG00000020243) #35 KRT18 (ENSBBBG00000020257) #36 Caprinae ANCESTRAL SPECIES ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.cb.b.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608.b.b #18 ENSGT00730000111608.a.a #18 ENSGT00940000155255.r ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609.h.b #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Goat MODERN SPECIES 24 HOXC13 (ENSCHIG00000025201) #8 ENSCHIG00000009554 ENSCHIG00000022160 CALCOCO1 (ENSCHIG00000016780) #9 ENSCHIG00000010354 ATF7 (ENSCHIG00000025884) #11 NPFF (ENSCHIG00000020253) #13 TARBP2 (ENSCHIG00000026017) #14 MAP3K12 (ENSCHIG00000008756) #16 PCBP2 (ENSCHIG00000019895) #17 ENSCHIG00000004451 #18 ENSCHIG00000025106 AMHR2 (ENSCHIG00000007964) #19 SP1 (ENSCHIG00000012718) #20 SP7 (ENSCHIG00000026953) #21 AAAS (ENSCHIG00000019501) #22 MYG1 (ENSCHIG00000026582) #24 ENSCHIG00000020918 #23 ESPL1 (ENSCHIG00000015195) #25 RARG (ENSCHIG00000023543) #27 ITGB7 (ENSCHIG00000015178) #28 ZNF740 (ENSCHIG00000008608) #29 CSAD (ENSCHIG00000026280) #30 SOAT2 (ENSCHIG00000025165) #31 IGFBP6 (ENSCHIG00000019464) #32 SPRYD3 (ENSCHIG00000013548) #33 TNS2 (ENSCHIG00000005570) #34 ENSCHIG00000012380 #35 ENSCHIG00000023628 #36 KRT8 (ENSCHIG00000018745) #37 KRT78 (ENSCHIG00000026015) Rambouillet Sheep MODERN SPECIES 19 HOXC10 (ENSOARG00020018091) HOXC11 (ENSOARG00020018118) HOXC12 (ENSOARG00020018162) #7 HOXC13 (ENSOARG00020018195) #8 CALCOCO1 (ENSOARG00020018277) #9 ATP5MC2 (ENSOARG00020018507) ATF7 (ENSOARG00020018598) #11 NPFF (ENSOARG00020018800) #13 TARBP2 (ENSOARG00020018838) #14 MAP3K12 (ENSOARG00020019014) #16 PCBP2 (ENSOARG00020019417) #17 PRR13 (ENSOARG00020019703) #18 AMHR2 (ENSOARG00020019831) #19 SP1 (ENSOARG00020006599) #20 SP7 (ENSOARG00020006625) #21 AAAS (ENSOARG00020006677) #22 MYG1 (ENSOARG00020006926) #24 PFDN5 (ENSOARG00020007019) #23 ESPL1 (ENSOARG00020007157) #25 MFSD5 (ENSOARG00020007322) #26 ENSOARG00020007350 RARG (ENSOARG00020007395) #27 ITGB7 (ENSOARG00020007654) #28 ZNF740 (ENSOARG00020007786) #29 ENSOARG00020007822 #30 SOAT2 (ENSOARG00020008053) #31 IGFBP6 (ENSOARG00020008241) #32 SPRYD3 (ENSOARG00020008291) #33 TNS2 (ENSOARG00020008391) #34 EIF4B (ENSOARG00020009127) #35 KRT18 (ENSOARG00020009288) #36 Siberian musk deer MODERN SPECIES 320 HOXC12 (ENSMMSG00000007203) #7 HOXC13 (ENSMMSG00000007187) #8 ENSMMSG00000007150 CALCOCO1 (ENSMMSG00000007007) #9 ENSMMSG00000006941 ATF7 (ENSMMSG00000006891) #11 NPFF (ENSMMSG00000006851) #13 TARBP2 (ENSMMSG00000006759) #14 MAP3K12 (ENSMMSG00000006599) #16 PCBP2 (ENSMMSG00000004497) #17 ENSMMSG00000004368 #18 AMHR2 (ENSMMSG00000022928) #19 SP1 (ENSMMSG00000022916) #20 ENSMMSG00000022914 SP7 (ENSMMSG00000022909) #21 AAAS (ENSMMSG00000022868) #22 MYG1 (ENSMMSG00000022839) #24 ENSMMSG00000022815 #23 ESPL1 (ENSMMSG00000022781) #25 MFSD5 (ENSMMSG00000022760) #26 RARG (ENSMMSG00000022717) #27 ITGB7 (ENSMMSG00000022688) #28 ZNF740 (ENSMMSG00000022675) #29 CSAD (ENSMMSG00000022614) #30 SOAT2 (ENSMMSG00000022566) #31 IGFBP6 (ENSMMSG00000022540) #32 SPRYD3 (ENSMMSG00000022512) #33 TNS2 (ENSMMSG00000022143) #34 EIF4B (ENSMMSG00000022018) #35 KRT18 (ENSMMSG00000021989) #36 ENSMMSG00000021973 Camelidae ANCESTRAL SPECIES 27 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.l #36 ENSGT00970000195436 Arabian camel MODERN SPECIES 3 HOXC10 (ENSCDRG00005004457) HOXC11 (ENSCDRG00005004473) HOXC12 (ENSCDRG00005004486) #7 HOXC13 (ENSCDRG00005004494) #8 CALCOCO1 (ENSCDRG00005004535) #9 ENSCDRG00005004636 ATF7 (ENSCDRG00005004669) #11 NPFF (ENSCDRG00005004686) #13 TARBP2 (ENSCDRG00005004705) #14 MAP3K12 (ENSCDRG00005004763) #16 PCBP2 (ENSCDRG00005004874) #17 PRR13 (ENSCDRG00005005020) #18 AMHR2 (ENSCDRG00005005034) #19 SP1 (ENSCDRG00005005074) #20 SP7 (ENSCDRG00005005094) #21 AAAS (ENSCDRG00005005129) #22 MYG1 (ENSCDRG00005005242) #24 PFDN5 (ENSCDRG00005005285) #23 ESPL1 (ENSCDRG00005005411) #25 MFSD5 (ENSCDRG00005005519) #26 RARG (ENSCDRG00005005534) #27 ITGB7 (ENSCDRG00005005597) #28 ZNF740 (ENSCDRG00005005666) #29 CSAD (ENSCDRG00005005717) #30 SOAT2 (ENSCDRG00005005839) #31 SPRYD3 (ENSCDRG00005005926) #33 IGFBP6 (ENSCDRG00005006043) #32 TNS2 (ENSCDRG00005006132) #34 EIF4B (ENSCDRG00005006873) #35 ENSCDRG00005006986 #36 ENSCDRG00005007095 Alpaca MODERN SPECIES 733 ENSVPAG00000000953 #22 MYG1 (ENSVPAG00000000952) #24 PFDN5 (ENSVPAG00000000951) #23 ENSVPAG00000000949 #25 MFSD5 (ENSVPAG00000000948) #26 ZNF740 (ENSVPAG00000000947) #29 CSAD (ENSVPAG00000000946) #30 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Equus ANCESTRAL SPECIES 16 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Donkey MODERN SPECIES 14 HOXC10 (ENSEASG00005010143) HOXC11 (ENSEASG00005010141) HOXC12 (ENSEASG00005010128) #7 HOXC13 (ENSEASG00005032367) #8 CALCOCO1 (ENSEASG00005010125) #9 ENSEASG00005033090 ATF7 (ENSEASG00005010041) #11 ENSEASG00005033454 #13 TARBP2 (ENSEASG00005010030) #14 MAP3K12 (ENSEASG00005010026) #16 ENSEASG00005010021 #17 PRR13 (ENSEASG00005030826) #18 AMHR2 (ENSEASG00005010020) #19 SP1 (ENSEASG00005010018) #20 SP7 (ENSEASG00005026327) #21 AAAS (ENSEASG00005009956) #22 MYG1 (ENSEASG00005009953) #24 PFDN5 (ENSEASG00005009949) #23 ESPL1 (ENSEASG00005009817) #25 MFSD5 (ENSEASG00005009753) #26 ENSEASG00005037807 RARG (ENSEASG00005009743) #27 ITGB7 (ENSEASG00005009717) #28 ZNF740 (ENSEASG00005009710) #29 CSAD (ENSEASG00005009384) #30 SOAT2 (ENSEASG00005009300) #31 IGFBP6 (ENSEASG00005009293) #32 SPRYD3 (ENSEASG00005009289) #33 TNS2 (ENSEASG00005009273) #34 EIF4B (ENSEASG00005009268) #35 KRT18 (ENSEASG00005009265) #36 Horse MODERN SPECIES 27 HOXC12 (ENSECAG00000024893) #7 HOXC11 (ENSECAG00000024900) HOXC13 (ENSECAG00000024867) #8 CALCOCO1 (ENSECAG00000024023) #9 ATP5MC2 (ENSECAG00000023021) ATF7 (ENSECAG00000021521) #11 NPFF (ENSECAG00000021139) #13 TARBP2 (ENSECAG00000011695) #14 MAP3K12 (ENSECAG00000010837) #16 ENSECAG00000022389 #17 PRR13 (ENSECAG00000042810) #18 AMHR2 (ENSECAG00000020247) #19 SP1 (ENSECAG00000028970) #20 SP7 (ENSECAG00000020140) #21 MYG1 (ENSECAG00000011273) #24 AAAS (ENSECAG00000012966) #22 PFDN5 (ENSECAG00000008454) #23 ESPL1 (ENSECAG00000022722) #25 MFSD5 (ENSECAG00000022554) #26 RARG (ENSECAG00000016596) #27 ITGB7 (ENSECAG00000013502) #28 ZNF740 (ENSECAG00000013071) #29 CSAD (ENSECAG00000006878) #30 SOAT2 (ENSECAG00000020109) #31 IGFBP6 (ENSECAG00000019633) #32 SPRYD3 (ENSECAG00000016252) #33 TNS2 (ENSECAG00000010909) #34 EIF4B (ENSECAG00000024091) #35 ENSECAG00000043286 ENSECAG00000038379 #36 KRT8 (ENSECAG00000021775) #37 Chiroptera ANCESTRAL SPECIES 4 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Microchiroptera ANCESTRAL SPECIES 2 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Greater horseshoe bat MODERN SPECIES 1 HOXC10 (ENSRFEG00010002942) HOXC11 (ENSRFEG00010002928) HOXC12 (ENSRFEG00010002916) #7 HOXC13 (ENSRFEG00010002899) #8 CALCOCO1 (ENSRFEG00010002780) #9 ENSRFEG00010002728 ATF7 (ENSRFEG00010002698) #11 NPFF (ENSRFEG00010002678) #13 TARBP2 (ENSRFEG00010002628) #14 MAP3K12 (ENSRFEG00010002570) #16 PCBP2 (ENSRFEG00010002468) #17 PRR13 (ENSRFEG00010002417) #18 AMHR2 (ENSRFEG00010002381) #19 SP1 (ENSRFEG00010002351) #20 SP7 (ENSRFEG00010002336) #21 AAAS (ENSRFEG00010002278) #22 MYG1 (ENSRFEG00010002224) #24 PFDN5 (ENSRFEG00010002194) #23 ESPL1 (ENSRFEG00010002105) #25 MFSD5 (ENSRFEG00010002068) #26 ENSRFEG00010002059 RARG (ENSRFEG00010001971) #27 ITGB7 (ENSRFEG00010001861) #28 ZNF740 (ENSRFEG00010001819) #29 CSAD (ENSRFEG00010001736) #30 SOAT2 (ENSRFEG00010001666) #31 IGFBP6 (ENSRFEG00010001642) #32 SPRYD3 (ENSRFEG00010001612) #33 TNS2 (ENSRFEG00010001462) #34 EIF4B (ENSRFEG00010001396) #35 KRT18 (ENSRFEG00010001356) #36 Microbat MODERN SPECIES 1097 HOXC8 (ENSMLUG00000003097) HOXC9 (ENSMLUG00000000483) HOXC10 (ENSMLUG00000000482) HOXC11 (ENSMLUG00000000470) HOXC12 (ENSMLUG00000026984) #7 HOXC13 (ENSMLUG00000015050) #8 CALCOCO1 (ENSMLUG00000011866) #9 ENSMLUG00000011860 ATF7 (ENSMLUG00000007697) #11 NPFF (ENSMLUG00000026248) #13 TARBP2 (ENSMLUG00000010035) #14 MAP3K12 (ENSMLUG00000010002) #16 PCBP2 (ENSMLUG00000009971) #17 AMHR2 (ENSMLUG00000017305) #19 SP1 (ENSMLUG00000017303) #20 AAAS (ENSMLUG00000017298) #22 MYG1 (ENSMLUG00000017297) #24 PFDN5 (ENSMLUG00000017296) #23 ESPL1 (ENSMLUG00000017290) #25 MFSD5 (ENSMLUG00000017285) #26 RARG (ENSMLUG00000017284) #27 ITGB7 (ENSMLUG00000017277) #28 ZNF740 (ENSMLUG00000017275) #29 CSAD (ENSMLUG00000017271) #30 SOAT2 (ENSMLUG00000017267) #31 IGFBP6 (ENSMLUG00000017266) #32 SPRYD3 (ENSMLUG00000013050) #33 TNS2 (ENSMLUG00000013033) #34 EIF4B (ENSMLUG00000013021) #35 ENSMLUG00000022439 #36 ENSMLUG00000004240 #37 Megabat MODERN SPECIES 688 HOXC11 (ENSPVAG00000012298) HOXC12 (ENSPVAG00000012297) #7 HOXC13 (ENSPVAG00000012296) #8 CALCOCO1 (ENSPVAG00000012293) #9 ATP5MC2 (ENSPVAG00000012291) #10 ATF7 (ENSPVAG00000012289) #11 NPFF (ENSPVAG00000012288) #13 TARBP2 (ENSPVAG00000012286) #14 MAP3K12 (ENSPVAG00000012285) #16 PCBP2 (ENSPVAG00000012284) #17 ENSPVAG00000012283 AMHR2 (ENSPVAG00000012281) #19 SP1 (ENSPVAG00000012280) #20 SP7 (ENSPVAG00000012279) #21 AAAS (ENSPVAG00000012276) #22 MYG1 (ENSPVAG00000012275) #24 PFDN5 (ENSPVAG00000012274) #23 ESPL1 (ENSPVAG00000012271) #25 Carnivora ANCESTRAL SPECIES 3 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Felidae ANCESTRAL SPECIES 2 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.v ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Panthera ANCESTRAL SPECIES ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.v ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 Panthera_a ANCESTRAL SPECIES 5 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.v ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 lion MODERN SPECIES 7 HOXC11 (ENSPLOG00000004812) HOXC12 (ENSPLOG00000004799) #7 HOXC13 (ENSPLOG00000004788) #8 ENSPLOG00000004763 CALCOCO1 (ENSPLOG00000004698) #9 ENSPLOG00000004664 ATF7 (ENSPLOG00000004653) #11 NPFF (ENSPLOG00000004647) #13 TARBP2 (ENSPLOG00000004637) #14 MAP3K12 (ENSPLOG00000004592) #16 PCBP2 (ENSPLOG00000004549) #17 PRR13 (ENSPLOG00000004509) #18 AMHR2 (ENSPLOG00000004468) #19 SP1 (ENSPLOG00000004442) #20 SP7 (ENSPLOG00000004434) #21 AAAS (ENSPLOG00000004385) #22 MYG1 (ENSPLOG00000004326) #24 ENSPLOG00000004300 #23 ESPL1 (ENSPLOG00000004253) #25 MFSD5 (ENSPLOG00000004236) #26 ENSPLOG00000004229 RARG (ENSPLOG00000004210) #27 ITGB7 (ENSPLOG00000004131) #28 ZNF740 (ENSPLOG00000004077) #29 CSAD (ENSPLOG00000004045) #30 SOAT2 (ENSPLOG00000004001) #31 IGFBP6 (ENSPLOG00000003974) #32 SPRYD3 (ENSPLOG00000003951) #33 TNS2 (ENSPLOG00000003813) #34 EIF4B (ENSPLOG00000003586) #35 KRT18 (ENSPLOG00000003515) #36 leopard MODERN SPECIES 77 HOXC12 (ENSPPRG00000017257) #7 ENSPPRG00000017468 #8 ENSPPRG00000018754 #8 ENSPPRG00000019762 CALCOCO1 (ENSPPRG00000024719) #9 ENSPPRG00000023773 ATF7 (ENSPPRG00000023291) #11 NPFF (ENSPPRG00000023107) #13 TARBP2 (ENSPPRG00000000189) #14 MAP3K12 (ENSPPRG00000001122) #16 PCBP2 (ENSPPRG00000005414) #17 PRR13 (ENSPPRG00000006236) #18 AMHR2 (ENSPPRG00000008074) #19 SP1 (ENSPPRG00000008912) #20 SP7 (ENSPPRG00000009172) #21 AAAS (ENSPPRG00000010054) #22 ENSPPRG00000011016 #24 ENSPPRG00000011404 #23 ESPL1 (ENSPPRG00000012544) #25 MFSD5 (ENSPPRG00000015955) #26 ENSPPRG00000015967 RARG (ENSPPRG00000016824) #27 ITGB7 (ENSPPRG00000023772) #28 ZNF740 (ENSPPRG00000023629) #29 CSAD (ENSPPRG00000001296) #30 SOAT2 (ENSPPRG00000001733) #31 IGFBP6 (ENSPPRG00000001958) #32 SPRYD3 (ENSPPRG00000002219) #33 TNS2 (ENSPPRG00000006741) #34 EIF4B (ENSPPRG00000008730) #35 KRT18 (ENSPPRG00000009215) #36 Tiger MODERN SPECIES 160 HOXC9 (ENSPTIG00000013688) HOXC10 (ENSPTIG00000013134) HOXC11 (ENSPTIG00000012999) ENSPTIG00000012759 CALCOCO1 (ENSPTIG00000010683) #9 ENSPTIG00000010097 ATF7 (ENSPTIG00000009129) #11 NPFF (ENSPTIG00000009027) #13 TARBP2 (ENSPTIG00000007859) #14 MAP3K12 (ENSPTIG00000006349) #16 ENSPTIG00000020757 #17 PRR13 (ENSPTIG00000019940) #18 AMHR2 (ENSPTIG00000018647) #19 SP1 (ENSPTIG00000018468) #20 SP7 (ENSPTIG00000018235) #21 AAAS (ENSPTIG00000016977) #22 MYG1 (ENSPTIG00000016171) #24 PFDN5 (ENSPTIG00000015595) #23 ESPL1 (ENSPTIG00000012412) #25 MFSD5 (ENSPTIG00000005497) #26 ENSPTIG00000005491 RARG (ENSPTIG00000011244) #27 ITGB7 (ENSPTIG00000007998) #28 ZNF740 (ENSPTIG00000007587) #29 CSAD (ENSPTIG00000005979) #30 SOAT2 (ENSPTIG00000004607) #31 IGFBP6 (ENSPTIG00000002176) #32 SPRYD3 (ENSPTIG00000022015) #33 TNS2 (ENSPTIG00000017362) #34 EIF4B (ENSPTIG00000014635) #35 KRT18 (ENSPTIG00000011876) #36 Cat MODERN SPECIES 238 HOXC9 (ENSFCAG00000031037) HOXC10 (ENSFCAG00000011202) HOXC11 (ENSFCAG00000038352) HOXC12 (ENSFCAG00000023389) #7 HOXC13 (ENSFCAG00000044858) #8 CALCOCO1 (ENSFCAG00000012712) #9 ATP5MC2 (ENSFCAG00000001502) ATF7 (ENSFCAG00000012783) #11 TARBP2 (ENSFCAG00000007757) #14 MAP3K12 (ENSFCAG00000012780) #16 PRR13 (ENSFCAG00000041253) #18 PCBP2 (ENSFCAG00000023348) #17 AMHR2 (ENSFCAG00000005894) #19 SP1 (ENSFCAG00000030741) #20 SP7 (ENSFCAG00000030976) #21 AAAS (ENSFCAG00000005881) #22 MYG1 (ENSFCAG00000050847) #24 ENSFCAG00000046899 #23 ESPL1 (ENSFCAG00000005874) #25 MFSD5 (ENSFCAG00000005873) #26 ENSFCAG00000040838 RARG (ENSFCAG00000005870) #27 ITGB7 (ENSFCAG00000005869) #28 ZNF740 (ENSFCAG00000005868) #29 CSAD (ENSFCAG00000013234) #30 SOAT2 (ENSFCAG00000000307) #31 IGFBP6 (ENSFCAG00000000306) #32 SPRYD3 (ENSFCAG00000000305) #33 TNS2 (ENSFCAG00000000304) #34 EIF4B (ENSFCAG00000000300) #35 KRT18 (ENSFCAG00000000299) #36 Caniformia ANCESTRAL SPECIES 19 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.o.b #36 Caniformia_b ANCESTRAL SPECIES 17 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.o.b #36 Ursidae ANCESTRAL SPECIES 36 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.y.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.ab.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.o.b #36 Ursus ANCESTRAL SPECIES 39 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.y.a ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.ab.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.o.b #36 ENSGT00940000153339.b #37 Polar bear MODERN SPECIES 262 HOXC6 (ENSUMAG00000010520) HOXC8 (ENSUMAG00000010514) ENSUMAG00000010512 HOXC10 (ENSUMAG00000010505) CALCOCO1 (ENSUMAG00000010484) #9 ENSUMAG00000010480 ATF7 (ENSUMAG00000010473) #11 NPFF (ENSUMAG00000010468) #13 TARBP2 (ENSUMAG00000010461) #14 MAP3K12 (ENSUMAG00000010453) #16 PCBP2 (ENSUMAG00000010437) #17 PRR13 (ENSUMAG00000010429) #18 AMHR2 (ENSUMAG00000010400) #19 SP1 (ENSUMAG00000010388) #20 SP7 (ENSUMAG00000010381) #21 AAAS (ENSUMAG00000010370) #22 MYG1 (ENSUMAG00000010360) #24 ENSUMAG00000010344 #23 ESPL1 (ENSUMAG00000010029) #25 MFSD5 (ENSUMAG00000009999) #26 RARG (ENSUMAG00000009993) #27 ITGB7 (ENSUMAG00000009982) #28 ZNF740 (ENSUMAG00000009977) #29 CSAD (ENSUMAG00000009967) #30 SOAT2 (ENSUMAG00000009955) #31 SPRYD3 (ENSUMAG00000009949) #33 TNS2 (ENSUMAG00000009423) #34 EIF4B (ENSUMAG00000009372) #35 KRT18 (ENSUMAG00000009365) #36 KRT8 (ENSUMAG00000009361) #37 KRT78 (ENSUMAG00000009358) American black bear MODERN SPECIES 1955 AAAS (ENSUAMG00000003393) #22 MYG1 (ENSUAMG00000003341) #24 ENSUAMG00000003329 #23 ESPL1 (ENSUAMG00000003305) #25 Giant Panda MODERN SPECIES 7 HOXC11 (ENSAMEG00000000668) HOXC12 (ENSAMEG00000026141) #7 HOXC13 (ENSAMEG00000029355) #8 CALCOCO1 (ENSAMEG00000000633) #9 ENSAMEG00000000619 ATF7 (ENSAMEG00000012625) #11 NPFF (ENSAMEG00000012622) #13 TARBP2 (ENSAMEG00000012601) #14 MAP3K12 (ENSAMEG00000012574) #16 PCBP2 (ENSAMEG00000012520) #17 ENSAMEG00000026467 PRR13 (ENSAMEG00000019417) #18 AMHR2 (ENSAMEG00000012496) #19 SP1 (ENSAMEG00000012479) #20 SP7 (ENSAMEG00000019390) #21 AAAS (ENSAMEG00000012432) #22 MYG1 (ENSAMEG00000026006) #24 ENSAMEG00000012414 #23 ESPL1 (ENSAMEG00000012346) #25 MFSD5 (ENSAMEG00000019354) #26 ENSAMEG00000027561 RARG (ENSAMEG00000012299) #27 ITGB7 (ENSAMEG00000012226) #28 ZNF740 (ENSAMEG00000026317) #29 CSAD (ENSAMEG00000012173) #30 SOAT2 (ENSAMEG00000012141) #31 IGFBP6 (ENSAMEG00000025337) #32 SPRYD3 (ENSAMEG00000012120) #33 ENSAMEG00000012074 #34 ENSAMEG00000012023 #35 ENSAMEG00000011981 #36 Mustelinae ANCESTRAL SPECIES 33 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157455.b.e #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00860000135771 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d.o.b #36 American mink MODERN SPECIES 304 HXC10 (ENSNVIG00000002291) HOXC11 (ENSNVIG00000002270) HOXC12 (ENSNVIG00000002217) #7 HOXC13 (ENSNVIG00000002210) #8 CALCOCO1 (ENSNVIG00000002092) #9 ENSNVIG00000002061 #10 ATF7 (ENSNVIG00000001946) #11 NPFF (ENSNVIG00000001931) #13 TARBP2 (ENSNVIG00000001900) #14 MAP3K12 (ENSNVIG00000001854) #16 ENSNVIG00000001409 #17 PRR13 (ENSNVIG00000001375) #18 AMHR2 (ENSNVIG00000001357) #19 SP1 (ENSNVIG00000001335) #20 SP7 (ENSNVIG00000001314) #21 AAAS (ENSNVIG00000001213) #22 MYG1 (ENSNVIG00000001139) #24 PFDN5 (ENSNVIG00000001059) #23 ESPL1 (ENSNVIG00000000404) #25 MFSD5 (ENSNVIG00000000383) #26 ENSNVIG00000000374 RARG (ENSNVIG00000000342) #27 ITGB7 (ENSNVIG00000000201) #28 ZNF740 (ENSNVIG00000000185) #29 CSAD (ENSNVIG00000000101) #30 SOAT2 (ENSNVIG00000000039) #31 IGFBP6 (ENSNVIG00000023318) #32 SPRYD3 (ENSNVIG00000023309) #33 TNS2 (ENSNVIG00000023249) #34 EIF4B (ENSNVIG00000023238) #35 ENSNVIG00000023237 #36 Ferret MODERN SPECIES 362 HOXC10 (ENSMPUG00000005868) HOXC11 (ENSMPUG00000005876) HOXC12 (ENSMPUG00000005886) #7 HOXC13 (ENSMPUG00000005890) #8 ENSMPUG00000005897 CALCOCO1 (ENSMPUG00000005917) #9 ENSMPUG00000005927 #10 ATF7 (ENSMPUG00000005932) #11 TARBP2 (ENSMPUG00000005944) #14 MAP3K12 (ENSMPUG00000005953) #16 PCBP2 (ENSMPUG00000005980) #17 PRR13 (ENSMPUG00000005995) #18 AMHR2 (ENSMPUG00000006005) #19 SP1 (ENSMPUG00000006016) #20 SP7 (ENSMPUG00000006036) #21 AAAS (ENSMPUG00000006044) #22 MYG1 (ENSMPUG00000006052) #24 ENSMPUG00000006059 #23 ESPL1 (ENSMPUG00000006087) #25 MFSD5 (ENSMPUG00000006104) #26 RARG (ENSMPUG00000006113) #27 ITGB7 (ENSMPUG00000006121) #28 ZNF740 (ENSMPUG00000006131) #29 CSAD (ENSMPUG00000006140) #30 SOAT2 (ENSMPUG00000006149) #31 IGFBP6 (ENSMPUG00000006160) #32 SPRYD3 (ENSMPUG00000006180) #33 TNS2 (ENSMPUG00000006189) #34 EIF4B (ENSMPUG00000006220) #35 ENSMPUG00000006369 #36 ENSMPUG00000006441 #37 Canidae ANCESTRAL SPECIES 8 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.cb.a.a #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b.c #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.i.b #35 ENSGT00940000153309.d.o.b #36 ENSGT00940000153339.b.k.a #37 Canis_lupus ANCESTRAL SPECIES 14 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000154651.j.b ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.cb.a.a #23 ENSGT00390000004990 #25 ENSGT00390000012138.a.a.j.s.f.a ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b.c #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336.i.b #35 ENSGT00940000153309.d.o.b #36 Dog MODERN SPECIES 19 HOXC8 (ENSCAFG00845018237) ENSCAFG00845018282 HOXC10 (ENSCAFG00845018342) HOXC11 (ENSCAFG00845018373) HOXC12 (ENSCAFG00845018411) #7 HOXC13 (ENSCAFG00845018448) #8 ENSCAFG00845018482 CALCOCO1 (ENSCAFG00845018567) #9 ENSCAFG00845018811 #10 ATF7 (ENSCAFG00845018892) #11 TARBP2 (ENSCAFG00845019060) #14 MAP3K12 (ENSCAFG00845019204) #16 ENSCAFG00845019393 #17 PRR13 (ENSCAFG00845019602) #18 SP1 (ENSCAFG00845019670) #20 AAAS (ENSCAFG00845019773) #22 C27H12orf10 (ENSCAFG00845020121) #24 PFDN5 (ENSCAFG00845020284) #23 ESPL1 (ENSCAFG00845020502) #25 ENSCAFG00845021046 MFSD5 (ENSCAFG00845021076) #26 ENSCAFG00845021117 #32 RARG (ENSCAFG00845021228) #27 ITGB7 (ENSCAFG00845021413) #28 ZNF740 (ENSCAFG00845021661) #29 CSAD (ENSCAFG00845021812) #30 SOAT2 (ENSCAFG00845022156) #31 SPRYD3 (ENSCAFG00845022297) #33 TNS2 (ENSCAFG00845022708) #34 EIF4B (ENSCAFG00845023395) #35 KRT18 (ENSCAFG00845023645) #36 Dingo MODERN SPECIES 202 HOXC8 (ENSCAFG00020020648) HOXC9 (ENSCAFG00020020653) HOXC10 (ENSCAFG00020020660) HOXC11 (ENSCAFG00020020666) HOXC12 (ENSCAFG00020020691) #7 HOXC13 (ENSCAFG00020020697) #8 ENSCAFG00020020699 CALCOCO1 (ENSCAFG00020020705) #9 ENSCAFG00020020717 ATF7 (ENSCAFG00020020729) #11 TARBP2 (ENSCAFG00020020735) #14 MAP3K12 (ENSCAFG00020020750) #16 PCBP2 (ENSCAFG00020020983) #17 AMHR2 (ENSCAFG00020021015) #19 SP1 (ENSCAFG00020021019) #20 AAAS (ENSCAFG00020021032) #22 MYG1 (ENSCAFG00020021220) #24 ENSCAFG00020021228 #23 ESPL1 (ENSCAFG00020021234) #25 ENSCAFG00020021248 MFSD5 (ENSCAFG00020021254) #26 RARG (ENSCAFG00020021255) #27 ENSCAFG00020021261 #28 ENSCAFG00020021265 #28 CSAD (ENSCAFG00020021290) #30 SOAT2 (ENSCAFG00020021371) #31 IGFBP6 (ENSCAFG00020021373) #32 SPRYD3 (ENSCAFG00020021374) #33 TNS2 (ENSCAFG00020021401) #34 ENSCAFG00020021664 #35 ENSCAFG00020021666 #35 Red fox MODERN SPECIES 32 HOXC9 (ENSVVUG00000028202) HOXC10 (ENSVVUG00000028196) HOXC11 (ENSVVUG00000028193) ENSVVUG00000028182 #7 HOXC13 (ENSVVUG00000028177) #8 ENSVVUG00000028173 CALCOCO1 (ENSVVUG00000028166) #9 ENSVVUG00000028163 #10 ATF7 (ENSVVUG00000028157) #11 TARBP2 (ENSVVUG00000028150) #14 MAP3K12 (ENSVVUG00000028137) #16 PCBP2 (ENSVVUG00000028129) #17 AMHR2 (ENSVVUG00000028127) #19 SP1 (ENSVVUG00000028123) #20 SP7 (ENSVVUG00000028120) #21 AAAS (ENSVVUG00000028112) #22 ENSVVUG00000028098 #23 MYG1 (ENSVVUG00000028076) #24 ENSVVUG00000028073 ESPL1 (ENSVVUG00000028069) #25 MFSD5 (ENSVVUG00000028067) #26 RARG (ENSVVUG00000028065) #27 ITGB7 (ENSVVUG00000028061) #28 ENSVVUG00000028054 CSAD (ENSVVUG00000028042) #30 SOAT2 (ENSVVUG00000028038) #31 IGFBP6 (ENSVVUG00000028035) #32 SPRYD3 (ENSVVUG00000028027) #33 ENSVVUG00000028023 #34 ENSVVUG00000028018 #35 ENSVVUG00000028016 #35 Atlantogenata ANCESTRAL SPECIES 33 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 ENSGT00940000153339 #37 Xenarthra ANCESTRAL SPECIES 47 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00730000111608 #18 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 Sloth MODERN SPECIES 156 AAAS (ENSCHOG00000004679) #22 Armadillo MODERN SPECIES 2448 HOXC10 (ENSDNOG00000017505) HOXC11 (ENSDNOG00000017503) HOXC12 (ENSDNOG00000033631) #7 HOXC13 (ENSDNOG00000048301) #8 CALCOCO1 (ENSDNOG00000032227) #9 ATP5MC2 (ENSDNOG00000009429) #10 ATF7 (ENSDNOG00000008735) #11 TARBP2 (ENSDNOG00000002144) #14 ENSDNOG00000008709 #16 ENSDNOG00000035361 #17 PRR13 (ENSDNOG00000034392) #18 AMHR2 (ENSDNOG00000016742) #19 SP1 (ENSDNOG00000017346) #20 ENSDNOG00000042952 SP7 (ENSDNOG00000013009) #21 AAAS (ENSDNOG00000039341) #22 ENSDNOG00000035598 #24 PFDN5 (ENSDNOG00000034200) #23 ESPL1 (ENSDNOG00000012939) #25 MFSD5 (ENSDNOG00000032000) #26 ITGB7 (ENSDNOG00000012912) #28 ZNF740 (ENSDNOG00000033888) #29 CSAD (ENSDNOG00000012871) #30 SOAT2 (ENSDNOG00000009436) #31 IGFBP6 (ENSDNOG00000000264) #32 SPRYD3 (ENSDNOG00000012484) #33 TNS2 (ENSDNOG00000034981) #34 ENSDNOG00000034034 #35 Afrotheria ANCESTRAL SPECIES 40 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 ENSGT00940000153339 #37 Afrotheria_a ANCESTRAL SPECIES 40 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157455 #10 ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00520000058554 #15 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309.d #36 ENSGT00940000153339 #37 Elephant MODERN SPECIES 196 HOXC10 (ENSLAFG00000018137) HOXC11 (ENSLAFG00000018133) HOXC12 (ENSLAFG00000024750) #7 HOXC13 (ENSLAFG00000030195) #8 CALCOCO1 (ENSLAFG00000015535) #9 ATP5MC2 (ENSLAFG00000015528) #10 ATF7 (ENSLAFG00000002626) #11 TARBP2 (ENSLAFG00000002620) #14 ENSLAFG00000029818 #15 MAP3K12 (ENSLAFG00000002616) #16 ENSLAFG00000013187 #17 ENSLAFG00000013184 AMHR2 (ENSLAFG00000018046) #19 SP1 (ENSLAFG00000018043) #20 SP7 (ENSLAFG00000013129) #21 AAAS (ENSLAFG00000018038) #22 MYG1 (ENSLAFG00000018032) #24 ENSLAFG00000027020 #23 ESPL1 (ENSLAFG00000008351) #25 MFSD5 (ENSLAFG00000008349) #26 RARG (ENSLAFG00000008347) #27 ITGB7 (ENSLAFG00000009194) #28 ZNF740 (ENSLAFG00000009191) #29 CSAD (ENSLAFG00000026715) #30 SOAT2 (ENSLAFG00000012870) #31 IGFBP6 (ENSLAFG00000027851) #32 SPRYD3 (ENSLAFG00000013333) #33 TNS2 (ENSLAFG00000009544) #34 EIF4B (ENSLAFG00000009534) #35 KRT18 (ENSLAFG00000003179) #36 KRT8 (ENSLAFG00000028611) #37 Hyrax MODERN SPECIES 2947 SP7 (ENSPCAG00000012545) #21 AAAS (ENSPCAG00000012459) #22 PFDN5 (ENSPCAG00000012413) #23 ESPL1 (ENSPCAG00000012180) #25 RARG (ENSPCAG00000012059) #27 ITGB7 (ENSPCAG00000011924) #28 ZNF740 (ENSPCAG00000011869) #29 ENSPCAG00000011767 #30 Tenrec DUPLICATION Tenrec MODERN SPECIES 3113 ENSETEG00000002113 #22 ENSETEG00000002112 #24 PFDN5 (ENSETEG00000002111) #23 ESPL1 (ENSETEG00000002107) #25 Tenrec MODERN SPECIES 14829 ENSETEG00000012809 #22 Marsupialia ANCESTRAL SPECIES 24 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 ENSGT00940000153339 #37 Marsupialia_b ANCESTRAL SPECIES 12 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 ENSGT00940000153339 #37 Diprotodontia ANCESTRAL SPECIES 29 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.f ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 Diprotodontia_a ANCESTRAL SPECIES 29 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b.f ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783.qb #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 ENSGT00950000183081.a.a.b #31 ENSGT00940000160528 #32 ENSGT00940000158675 #33 ENSGT00940000161535 #34 ENSGT00940000153336 #35 ENSGT00940000153309 #36 Common wonbat MODERN SPECIES 793 HOXC12 (ENSVURG00010010771) #7 HOXC13 (ENSVURG00010010776) #8 CALCOCO1 (ENSVURG00010010795) #9 ENSVURG00010010814 ATF7 (ENSVURG00010010840) #11 TARBP2 (ENSVURG00010010864) #14 MAP3K12 (ENSVURG00010010877) #16 PCBP2 (ENSVURG00010010916) #17 ENSVURG00010010974 AMHR2 (ENSVURG00010010987) #19 SP1 (ENSVURG00010011017) #20 SP7 (ENSVURG00010011030) #21 AAAS (ENSVURG00010011046) #22 ENSVURG00010011090 #24 ENSVURG00010011103 #23 ESPL1 (ENSVURG00010011152) #25 MFSD5 (ENSVURG00010011235) #26 RARG (ENSVURG00010011242) #27 ITGB7 (ENSVURG00010011266) #28 ZNF740 (ENSVURG00010011298) #29 CSAD (ENSVURG00010011317) #30 ENSVURG00010011346 SOAT2 (ENSVURG00010011356) #31 IGFBP6 (ENSVURG00010011364) #32 SPRYD3 (ENSVURG00010011377) #33 TNS2 (ENSVURG00010011411) #34 EIF4B (ENSVURG00010011541) #35 KRT18 (ENSVURG00010011564) #36 koala MODERN SPECIES 165 HOXC9 (ENSPCIG00000037360) HOXC10 (ENSPCIG00000006695) HOXC11 (ENSPCIG00000006693) HOXC12 (ENSPCIG00000006689) #7 HOXC13 (ENSPCIG00000006688) #8 CALCOCO1 (ENSPCIG00000006685) #9 ENSPCIG00000006683 ATF7 (ENSPCIG00000006677) #11 NPFF (ENSPCIG00000006674) #13 TARBP2 (ENSPCIG00000006672) #14 MAP3K12 (ENSPCIG00000006667) #16 PCBP2 (ENSPCIG00000006658) #17 AMHR2 (ENSPCIG00000006651) #19 SP1 (ENSPCIG00000006649) #20 SP7 (ENSPCIG00000006646) #21 AAAS (ENSPCIG00000006642) #22 ENSPCIG00000006639 #24 ENSPCIG00000006634 #23 ESPL1 (ENSPCIG00000005389) #25 MFSD5 (ENSPCIG00000005331) #26 RARG (ENSPCIG00000005306) #27 ITGB7 (ENSPCIG00000005268) #28 ZNF740 (ENSPCIG00000005254) #29 CSAD (ENSPCIG00000005239) #30 ENSPCIG00000035255 ENSPCIG00000005217 SOAT2 (ENSPCIG00000005204) #31 IGFBP6 (ENSPCIG00000005195) #32 SPRYD3 (ENSPCIG00000011234) #33 TNS2 (ENSPCIG00000011220) #34 EIF4B (ENSPCIG00000011212) #35 Wallaby MODERN SPECIES 4134 AAAS (ENSMEUG00000012126) #22 MYG1 (ENSMEUG00000012114) #24 PFDN5 (ENSMEUG00000012110) #23 ESPL1 (ENSMEUG00000012046) #25 Tasmanian devil MODERN SPECIES 4 HOXC10 (ENSSHAG00000006601) HOXC11 (ENSSHAG00000027021) HOXC12 (ENSSHAG00000032054) #7 HOXC13 (ENSSHAG00000024515) #8 CALCOCO1 (ENSSHAG00000004757) #9 ENSSHAG00000020669 ATF7 (ENSSHAG00000006701) #11 NPFF (ENSSHAG00000007053) #13 TARBP2 (ENSSHAG00000007064) #14 MAP3K12 (ENSSHAG00000007265) #16 ENSSHAG00000007342 #17 ENSSHAG00000027175 AMHR2 (ENSSHAG00000001044) #19 SP1 (ENSSHAG00000003502) #20 SP7 (ENSSHAG00000025485) #21 AAAS (ENSSHAG00000005509) #22 PFDN5 (ENSSHAG00000030064) #23 ENSSHAG00000004455 #25 ENSSHAG00000005453 #24 MFSD5 (ENSSHAG00000026364) #26 RARG (ENSSHAG00000002378) #27 ITGB7 (ENSSHAG00000001218) #28 ZNF740 (ENSSHAG00000023992) #29 CSAD (ENSSHAG00000001476) #30 SOAT2 (ENSSHAG00000001418) #31 IGFBP6 (ENSSHAG00000002190) #32 SPRYD3 (ENSSHAG00000001889) #33 TNS2 (ENSSHAG00000021258) #34 EIF4B (ENSSHAG00000003682) #35 KRT18 (ENSSHAG00000005702) #36 KRT8 (ENSSHAG00000002794) #37 Platypus MODERN SPECIES 1 HOXC9 (ENSOANG00000047626) HOXC10 (ENSOANG00000013041) HOXC11 (ENSOANG00000013040) HOXC12 (ENSOANG00000015091) #7 HOXC13 (ENSOANG00000015090) #8 CALCOCO1 (ENSOANG00000043577) #9 ENSOANG00000011230 ATF7 (ENSOANG00000037869) #11 ENSOANG00000036045 TARBP2 (ENSOANG00000038528) #14 MAP3K12 (ENSOANG00000045742) #16 PCBP2 (ENSOANG00000046601) #17 AMHR2 (ENSOANG00000040113) #19 ENSOANG00000037395 #20 SP7 (ENSOANG00000043620) #21 AAAS (ENSOANG00000049038) #22 ENSOANG00000045056 #24 PFDN5 (ENSOANG00000010773) #23 ESPL1 (ENSOANG00000051340) #25 MFSD5 (ENSOANG00000047684) #26 RARG (ENSOANG00000012236) #27 ITGB7 (ENSOANG00000005915) #28 ZNF740 (ENSOANG00000049477) #29 CSAD (ENSOANG00000039630) #30 SOAT2 (ENSOANG00000021000) #31 ENSOANG00000040336 #32 SPRYD3 (ENSOANG00000013039) #33 EIF4B (ENSOANG00000009940) #35 KRT18 (ENSOANG00000045852) #36 ENSOANG00000001940 ENSOANG00000002920 Sauria ANCESTRAL SPECIES 25 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 Archelosauria ANCESTRAL SPECIES 26 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 Archosauria ANCESTRAL SPECIES 33 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 Aves ANCESTRAL SPECIES 41 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 Neognathae ANCESTRAL SPECIES 31 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 Galloanserae ANCESTRAL SPECIES 37 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00940000173886 Anatidae ANCESTRAL SPECIES 125 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 Duck MODERN SPECIES 31 ENSAPLG00000026205 #21 AAAS (ENSAPLG00000029097) #22 MYG1 (ENSAPLG00000030654) #24 VDR (ENSAPLG00000005087) SENP1 (ENSAPLG00000010680) PFKM (ENSAPLG00000026256) MARS1 (ENSAPLG00000014821) ENSAPLG00000001411 GLI1 (ENSAPLG00000024305) ENSAPLG00000026069 INHBC (ENSAPLG00000024015) R3HDM2 (ENSAPLG00000004298) STAC3 (ENSAPLG00000004189) ENSAPLG00000026322 ENSAPLG00000023380 ENSAPLG00000026068 ENSAPLG00000019820 Pink-footed goose MODERN SPECIES 535 SP7 (ENSABRG00000013768) #21 AAAS (ENSABRG00000013804) #22 MYG1 (ENSABRG00000013840) #24 VDR (ENSABRG00000013874) TMEM106C (ENSABRG00000013893) COL2A1 (ENSABRG00000013919) Phasianidae ANCESTRAL SPECIES 25 ENSGT00940000161023 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00940000158240 #30 ENSGT00940000159609 #29 ENSGT01090000259987.a.a.b #28 ENSGT00940000156458 #27 ENSGT00390000012629 #26 ENSGT00940000173886 Phasianidae_b ANCESTRAL SPECIES 37 ENSGT00940000158801 ENSGT00390000004897.o ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00940000154265.bc.c.a.a.b ENSGT00940000158240 #30 ENSGT00940000159609 #29 ENSGT01090000259987.a.a.b #28 ENSGT00940000156458 #27 ENSGT00390000012629 #26 ENSGT00940000173886 Chicken MODERN SPECIES 27 HOXC8 (ENSGALG00010025708) HOXC9 (ENSGALG00010025958) HOXC10 (ENSGALG00010025964) HOXC11 (ENSGALG00010025719) HOXC12 (ENSGALG00010025552) #7 HOXC13 (ENSGALG00010025397) #8 ENSGALG00010022734 ATF7 (ENSGALG00010024238) #11 NPFF (ENSGALG00010024241) TARBP2 (ENSGALG00010024245) #14 MAP3K12 (ENSGALG00010024267) #16 PCBP2 (ENSGALG00010024325) #17 AMHR2 (ENSGALG00010024335) #19 SP1 (ENSGALG00010024351) #20 ENSGALG00010024365 AAAS (ENSGALG00010024389) #22 MYG1 (ENSGALG00010024410) #24 VDR (ENSGALG00010024416) TMEM106C (ENSGALG00010024420) SENP1 (ENSGALG00010024465) PFKM (ENSGALG00010024547) ASB8 (ENSGALG00010024553) ENSGALG00010024556 PFDN5 (ENSGALG00010024558) #23 ESPL1 (ENSGALG00010024563) #25 ENSGALG00010024573 CSAD (ENSGALG00010024576) #30 ZNF740 (ENSGALG00010024579) #29 ITGB7 (ENSGALG00010024583) #28 MFSD5 (ENSGALG00010024604) #26 RARG (ENSGALG00010024607) #27 Turkey MODERN SPECIES 1011 ENSMGAG00000022573 #22 ENSMGAG00000022375 #24 ENSMGAG00000004846 ENSMGAG00000004877 Japanese quail MODERN SPECIES 43 HOXC6 (ENSCJPG00005007698) HOXC8 (ENSCJPG00005007699) HOXC9 (ENSCJPG00005007700) HOXC10 (ENSCJPG00005007702) HOXC11 (ENSCJPG00005007703) HOXC13 (ENSCJPG00005007704) #8 ENSCJPG00005007709 ATF7 (ENSCJPG00005007711) #11 ENSCJPG00005007713 ENSCJPG00005007715 ENSCJPG00005007716 #14 MAP3K12 (ENSCJPG00005007718) #16 PCBP2 (ENSCJPG00005007888) #17 SP1 (ENSCJPG00005007894) #20 ENSCJPG00005007897 AAAS (ENSCJPG00005007913) #22 MYG1 (ENSCJPG00005007919) #24 VDR (ENSCJPG00005007922) TMEM106C (ENSCJPG00005007927) COL2A1 (ENSCJPG00005007932) SENP1 (ENSCJPG00005007946) PFKM (ENSCJPG00005007950) ASB8 (ENSCJPG00005007951) ENSCJPG00005007952 ESPL1 (ENSCJPG00005007953) #25 ENSCJPG00005007954 CSAD (ENSCJPG00005007955) #30 ZNF740 (ENSCJPG00005007956) #29 ENSCJPG00005007957 #28 RARG (ENSCJPG00005007958) #27 MFSD5 (ENSCJPG00005007960) #26 Neognathae_b ANCESTRAL SPECIES 30 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 Neognathae_c ANCESTRAL SPECIES 34 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00390000008783 #23 ENSGT00390000004990 #25 Kakapo MODERN SPECIES 15 DAZAP2 (ENSSHBG00005020394) SMAGP (ENSSHBG00005020396) BIN2 (ENSSHBG00005020400) ENSSHBG00005020406 ENSSHBG00005020411 GALNT6 (ENSSHBG00005020420) SLC4A8 (ENSSHBG00005020437) TARBP2 (ENSSHBG00005020456) #14 MAP3K12 (ENSSHBG00005020459) #16 ENSSHBG00005020466 ENSSHBG00005020472 PCBP2 (ENSSHBG00005020490) #17 AMHR2 (ENSSHBG00005020511) #19 SP1 (ENSSHBG00005020520) #20 SP7 (ENSSHBG00005020523) #21 AAAS (ENSSHBG00005020532) #22 MYG1 (ENSSHBG00005020536) #24 VDR (ENSSHBG00005020542) TMEM106C (ENSSHBG00005020552) COL2A1 (ENSSHBG00005020568) SENP1 (ENSSHBG00005020604) PFKM (ENSSHBG00005020639) ASB8 (ENSSHBG00005020645) ENSSHBG00005020652 PFDN5 (ENSSHBG00005020657) #23 ESPL1 (ENSSHBG00005020705) #25 BCDIN3D (ENSSHBG00005020729) ENSSHBG00005020731 ENSSHBG00005020735 ENSSHBG00005020743 ENSSHBG00005020765 Golden eagle MODERN SPECIES 6 HOXC9 (ENSACCG00020009698) HOXC10 (ENSACCG00020009716) HOXC11 (ENSACCG00020009738) HOXC12 (ENSACCG00020009752) #7 HOXC13 (ENSACCG00020009769) #8 ENSACCG00020009790 ATF7 (ENSACCG00020009825) #11 ENSACCG00020009852 ENSACCG00020009866 #14 ENSACCG00020009882 #14 MAP3K12 (ENSACCG00020009899) #16 PCBP2 (ENSACCG00020009932) #17 AMHR2 (ENSACCG00020009950) #19 SP1 (ENSACCG00020009967) #20 ENSACCG00020010022 AAAS (ENSACCG00020010065) #22 MYG1 (ENSACCG00020010078) #24 VDR (ENSACCG00020010088) TMEM106C (ENSACCG00020010101) COL2A1 (ENSACCG00020010155) SENP1 (ENSACCG00020010196) ENSACCG00020010210 PFKM (ENSACCG00020010225) ASB8 (ENSACCG00020010239) PFDN5 (ENSACCG00020011466) #23 C1QL4 (ENSACCG00020011541) DNAJC22 (ENSACCG00020011560) SPATS2 (ENSACCG00020011580) KCNH3 (ENSACCG00020011660) MCRS1 (ENSACCG00020011760) ITGA7 (ENSACCG00020012060) Passeriformes ANCESTRAL SPECIES 49 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT00740000115581.e Great tit MODERN SPECIES 276 HOXC13 (ENSPMJG00000000827) #8 ENSPMJG00000000824 ATF7 (ENSPMJG00000000810) #11 ENSPMJG00000000806 #14 MAP3K12 (ENSPMJG00000000797) #16 PCBP2 (ENSPMJG00000000734) #17 AMHR2 (ENSPMJG00000000705) #19 SP1 (ENSPMJG00000000695) #20 SP7 (ENSPMJG00000000660) #21 AAAS (ENSPMJG00000000640) #22 MYG1 (ENSPMJG00000000630) #24 VDR (ENSPMJG00000000611) TMEM106C (ENSPMJG00000000589) COL2A1 (ENSPMJG00000000506) SENP1 (ENSPMJG00000000428) PFKM (ENSPMJG00000000399) ASB8 (ENSPMJG00000000372) ENSPMJG00000000368 Passeriformes_d ANCESTRAL SPECIES 45 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473.h ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d.l ENSGT00940000159366 ENSGT00740000115581.e Flycatcher MODERN SPECIES 319 SP1 (ENSFALG00000001318) #20 ENSFALG00000001303 #22 MYG1 (ENSFALG00000001289) #24 ENSFALG00000001285 ENSFALG00000001283 Passeriformes_g ANCESTRAL SPECIES 56 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473.h ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d.l ENSGT00940000159366 ENSGT00740000115581.e Medium ground finch MODERN SPECIES 415 PCBP2 (ENSGFOG00000002750) #17 ENSGFOG00000002720 #20 AAAS (ENSGFOG00000002642) #22 ENSGFOG00000002628 #24 VDR (ENSGFOG00000002430) TMEM106C (ENSGFOG00000002399) SENP1 (ENSGFOG00000002252) PFKM (ENSGFOG00000002211) ASB8 (ENSGFOG00000002151) ENSGFOG00000002102 Passeroidea ANCESTRAL SPECIES 58 ENSGT00940000159254 ENSGT00940000161194 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00940000155473.h ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d.l ENSGT00940000159366 ENSGT00740000115581.e Zebra finch DUPLICATION Zebra finch MODERN SPECIES 22 ENSTGUG00000024758 ENSTGUG00000015572 ENSTGUG00000014303 ENSTGUG00000028506 ENSTGUG00000029253 HOXC12 (ENSTGUG00000016959) #7 ENSTGUG00000018823 #8 ENSTGUG00000019351 #11 ENSTGUG00000025685 #14 ENSTGUG00000023957 #14 ENSTGUG00000023166 #16 ENSTGUG00000016232 #17 ENSTGUG00000021232 #19 ENSTGUG00000020153 #20 ENSTGUG00000028639 #21 ENSTGUG00000023338 #22 ENSTGUG00000025076 #24 ENSTGUG00000029269 ENSTGUG00000027589 ENSTGUG00000028804 ENSTGUG00000029376 ENSTGUG00000024525 ENSTGUG00000029058 ENSTGUG00000021259 ENSTGUG00000019886 ENSTGUG00000021283 ENSTGUG00000003479 ENSTGUG00000003412 ENSTGUG00000003391 ATF1 (ENSTGUG00000027804) ENSTGUG00000003382 Zebra finch MODERN SPECIES 22 ENSTGUG00000024186 ENSTGUG00000028939 HOXC4 (ENSTGUG00000028387) ENSTGUG00000023038 ENSTGUG00000023138 ENSTGUG00000015566 ENSTGUG00000014511 ENSTGUG00000027959 ENSTGUG00000023354 #8 ENSTGUG00000017046 #11 ENSTGUG00000026425 #14 ENSTGUG00000029660 #16 ENSTGUG00000028344 #17 ENSTGUG00000022474 #19 ENSTGUG00000022073 #20 ENSTGUG00000027678 #22 ENSTGUG00000028340 #24 ENSTGUG00000017093 ENSTGUG00000029458 COL1A1 (ENSTGUG00000024335) ENSTGUG00000003284 ENSTGUG00000020432 #14 ENSTGUG00000003546 ENSTGUG00000029291 ENSTGUG00000027694 ENSTGUG00000026704 #21 ENSTGUG00000025968 ENSTGUG00000025052 ENSTGUG00000019082 ENSTGUG00000022305 ENSTGUG00000025020 African ostrich MODERN SPECIES 691 HOXC4 (ENSSCUG00000009179) HOXC6 (ENSSCUG00000009181) HOXC8 (ENSSCUG00000009183) ENSSCUG00000009185 HOXC10 (ENSSCUG00000009186) HOXC11 (ENSSCUG00000009188) ATF7 (ENSSCUG00000009193) #11 MAP3K12 (ENSSCUG00000009196) #16 PCBP2 (ENSSCUG00000009200) #17 SP1 (ENSSCUG00000009204) #20 AAAS (ENSSCUG00000009210) #22 MYG1 (ENSSCUG00000009214) #24 VDR (ENSSCUG00000009219) TMEM106C (ENSSCUG00000009223) Australian saltwater crocodile MODERN SPECIES 12 CALCOCO1 (ENSCPRG00005006850) #9 ENSCPRG00005006863 ENSCPRG00005006864 ATF7 (ENSCPRG00005006870) #11 NPFF (ENSCPRG00005006878) #13 TARBP2 (ENSCPRG00005006888) #14 ENSCPRG00005006894 MAP3K12 (ENSCPRG00005006900) #16 PCBP2 (ENSCPRG00005006914) #17 AMHR2 (ENSCPRG00005006942) #19 SP1 (ENSCPRG00005006979) #20 SP7 (ENSCPRG00005006987) #21 AAAS (ENSCPRG00005006993) #22 MYG1 (ENSCPRG00005007001) #24 VDR (ENSCPRG00005007013) TMEM106C (ENSCPRG00005007033) SENP1 (ENSCPRG00005007043) PFKM (ENSCPRG00005007122) ASB8 (ENSCPRG00005007574) ENSCPRG00005007580 PFDN5 (ENSCPRG00005007584) #23 ESPL1 (ENSCPRG00005007593) #25 MFSD5 (ENSCPRG00005007633) #26 ENSCPRG00005007636 Cryptodira ANCESTRAL SPECIES 25 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 Testudinoidea ANCESTRAL SPECIES 21 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 Emydidae ANCESTRAL SPECIES 34 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT00940000155440.d ENSGT00940000159366 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 Three-toed box turtle MODERN SPECIES 383 HOXC9 (ENSTMTG00000004828) HOXC10 (ENSTMTG00000004853) HOXC11 (ENSTMTG00000004871) HOXC12 (ENSTMTG00000004887) #7 HOXC13 (ENSTMTG00000004896) #8 CALCOCO1 (ENSTMTG00000004927) #9 ENSTMTG00000004989 ATF7 (ENSTMTG00000005026) #11 TARBP2 (ENSTMTG00000005163) #14 ENSTMTG00000005186 MAP3K12 (ENSTMTG00000005204) #16 PCBP2 (ENSTMTG00000005243) #17 AMHR2 (ENSTMTG00000005331) #19 SP1 (ENSTMTG00000005365) #20 SP7 (ENSTMTG00000005372) #21 AAAS (ENSTMTG00000005384) #22 ENSTMTG00000005427 VDR (ENSTMTG00000005441) TMEM106C (ENSTMTG00000005459) COL2A1 (ENSTMTG00000005481) SENP1 (ENSTMTG00000005570) PFKM (ENSTMTG00000005865) ASB8 (ENSTMTG00000008769) ENSTMTG00000008782 PFDN5 (ENSTMTG00000008802) #23 ESPL1 (ENSTMTG00000008835) #25 MFSD5 (ENSTMTG00000008904) #26 ENSTMTG00000008909 RARG (ENSTMTG00000008939) #27 ITGB7 (ENSTMTG00000008994) #28 ZNF740 (ENSTMTG00000009368) #29 painted turtle MODERN SPECIES 845 HOXC12 (ENSCPBG00000000425) #7 HOXC13 (ENSCPBG00000000447) #8 CALCOCO1 (ENSCPBG00000000511) #9 ENSCPBG00000000551 ATF7 (ENSCPBG00000000581) #11 NPFF (ENSCPBG00000000635) #13 TARBP2 (ENSCPBG00000000654) #14 ENSCPBG00000000687 ENSCPBG00000000700 MAP3K12 (ENSCPBG00000000760) #16 PCBP2 (ENSCPBG00000001467) #17 AMHR2 (ENSCPBG00000001530) #19 SP1 (ENSCPBG00000001711) #20 ENSCPBG00000001726 #21 ENSCPBG00000001783 AAAS (ENSCPBG00000001788) #22 ENSCPBG00000001804 MYG1 (ENSCPBG00000001813) #24 VDR (ENSCPBG00000001825) Testudinidae ANCESTRAL SPECIES 25 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b ENSGT01000000221284 ENSGT00940000155440.d ENSGT00940000159366 ENSGT00940000162179.f.m.a ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000164283.a Abingdon island giant tortoise MODERN SPECIES 1188 HOXC11 (ENSCABG00000004678) HOXC12 (ENSCABG00000004687) #7 HOXC13 (ENSCABG00000004688) #8 CALCOCO1 (ENSCABG00000004690) #9 ENSCABG00000004691 ENSCABG00000004693 ATF7 (ENSCABG00000004698) #11 ENSCABG00000004755 TARBP2 (ENSCABG00000004756) #14 ENSCABG00000004757 MAP3K12 (ENSCABG00000004759) #16 PCBP2 (ENSCABG00000004763) #17 AMHR2 (ENSCABG00000004771) #19 SP1 (ENSCABG00000004772) #20 SP7 (ENSCABG00000004773) #21 AAAS (ENSCABG00000004775) #22 MYG1 (ENSCABG00000004777) #24 VDR (ENSCABG00000004778) TMEM106C (ENSCABG00000004784) COL2A1 (ENSCABG00000004791) SENP1 (ENSCABG00000004838) ENSCABG00000005005 PFKM (ENSCABG00000005006) ASB8 (ENSCABG00000005018) ENSCABG00000005019 ENSCABG00000005021 PFDN5 (ENSCABG00000005023) #23 ESPL1 (ENSCABG00000005028) #25 MFSD5 (ENSCABG00000005033) #26 ENSCABG00000005034 RARG (ENSCABG00000005035) #27 Goode s thornscrub tortoise MODERN SPECIES 17 HOXC11 (ENSGEVG00005003936) HOXC12 (ENSGEVG00005003948) #7 HOXC13 (ENSGEVG00005003958) #8 CALCOCO1 (ENSGEVG00005003995) #9 ENSGEVG00005004023 ATF7 (ENSGEVG00005004038) #11 NPFF (ENSGEVG00005004056) #13 TARBP2 (ENSGEVG00005004070) #14 ENSGEVG00005004089 MAP3K12 (ENSGEVG00005004107) #16 PCBP2 (ENSGEVG00005008987) #17 ENSGEVG00005009118 ENSGEVG00005009141 SP1 (ENSGEVG00005009182) #20 SP7 (ENSGEVG00005009213) #21 AAAS (ENSGEVG00005009257) #22 ENSGEVG00005009307 MYG1 (ENSGEVG00005009350) #24 VDR (ENSGEVG00005009445) TMEM106C (ENSGEVG00005009885) COL2A1 (ENSGEVG00005009962) SENP1 (ENSGEVG00005010700) ENSGEVG00005010778 PFKM (ENSGEVG00005010891) ASB8 (ENSGEVG00005011375) ENSGEVG00005011392 ENSGEVG00005011432 ENSGEVG00005011453 PFDN5 (ENSGEVG00005011533) #23 ESPL1 (ENSGEVG00005011575) #25 MFSD5 (ENSGEVG00005011821) #26 Chinese turtle MODERN SPECIES 2238 PCBP2 (ENSPSIG00000007484) #17 SP1 (ENSPSIG00000007013) #20 SP7 (ENSPSIG00000001445) #21 AAAS (ENSPSIG00000018186) #22 VDR (ENSPSIG00000018108) TMEM106C (ENSPSIG00000017930) COL2A1 (ENSPSIG00000014269) SENP1 (ENSPSIG00000012949) PFKM (ENSPSIG00000008414) ASB8 (ENSPSIG00000007270) ENSPSIG00000006756 PFDN5 (ENSPSIG00000006378) #23 ESPL1 (ENSPSIG00000015544) #25 ENSPSIG00000014806 ENSPSIG00000014799 MFSD5 (ENSPSIG00000014686) #26 Lepidosauria ANCESTRAL SPECIES 73 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 Episquamata ANCESTRAL SPECIES 4 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000162804 Laterata ANCESTRAL SPECIES 1 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00990000209831 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000162804 Common wall lizard MODERN SPECIES 10 ENSPMRG00000001431 CALCOCO1 (ENSPMRG00000001418) #9 ENSPMRG00000001403 ATF7 (ENSPMRG00000001388) #11 NPFF (ENSPMRG00000001379) #13 TARBP2 (ENSPMRG00000001360) #14 ENSPMRG00000001341 ENSPMRG00000001332 MAP3K12 (ENSPMRG00000001314) #16 PCBP2 (ENSPMRG00000001196) #17 ENSPMRG00000001145 SP1 (ENSPMRG00000001129) #20 ENSPMRG00000001110 ENSPMRG00000001100 SP7 (ENSPMRG00000001076) #21 AAAS (ENSPMRG00000000973) #22 ENSPMRG00000000939 MYG1 (ENSPMRG00000000915) #24 VDR (ENSPMRG00000000898) ENSPMRG00000000880 ENSPMRG00000000870 ENSPMRG00000000862 ENSPMRG00000000842 TMEM106C (ENSPMRG00000000798) AGAP2 (ENSPMRG00000000765) TSPAN31 (ENSPMRG00000000746) ENSPMRG00000000717 MARCHF9 (ENSPMRG00000000693) CYP27B1 (ENSPMRG00000000676) METTL1 (ENSPMRG00000000666) EEF1AKMT3 (ENSPMRG00000000655) Argentine black and white tegu MODERN SPECIES 18 HOXC8 (ENSSMRG00000002576) HOXC9 (ENSSMRG00000002581) HOXC10 (ENSSMRG00000002587) HOXC11 (ENSSMRG00000002589) HOXC12 (ENSSMRG00000002593) #7 HOXC13 (ENSSMRG00000002595) #8 CALCOCO1 (ENSSMRG00000002659) #9 ENSSMRG00000002669 ATF7 (ENSSMRG00000002720) #11 TARBP2 (ENSSMRG00000002725) #14 ENSSMRG00000002730 MAP3K12 (ENSSMRG00000002781) #16 ENSSMRG00000003771 #17 SP1 (ENSSMRG00000003831) #20 SP7 (ENSSMRG00000003860) #21 AAAS (ENSSMRG00000003865) #22 ENSSMRG00000003885 MYG1 (ENSSMRG00000003891) #24 VDR (ENSSMRG00000003899) TMEM106C (ENSSMRG00000003906) AGAP2 (ENSSMRG00000003925) TSPAN31 (ENSSMRG00000008366) CDK4 (ENSSMRG00000008367) MARCHF9 (ENSSMRG00000008400) SLC4A8 (ENSSMRG00000008409) GALNT6 (ENSSMRG00000008495) ENSSMRG00000008505 BIN2 (ENSSMRG00000008507) SMAGP (ENSSMRG00000008568) DAZAP2 (ENSSMRG00000008571) POU6F1 (ENSSMRG00000008583) Toxicofera ANCESTRAL SPECIES 19 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00390000015021 #13 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b.c #9 ENSGT00950000183025.b.b.d #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330 Indian cobra MODERN SPECIES 1 HOXC10 (ENSNNAG00000009396) ENSNNAG00000009373 HOXC11 (ENSNNAG00000009350) HOXC12 (ENSNNAG00000009339) #7 HOXC13 (ENSNNAG00000009275) #8 ENSNNAG00000009259 #9 ENSNNAG00000009241 ATF7 (ENSNNAG00000009169) #11 ENSNNAG00000009151 TARBP2 (ENSNNAG00000009069) #14 ENSNNAG00000009038 MAP3K12 (ENSNNAG00000008985) #16 PCBP2 (ENSNNAG00000008863) #17 SP1 (ENSNNAG00000008815) #20 SP7 (ENSNNAG00000008790) #21 AAAS (ENSNNAG00000008624) #22 ENSNNAG00000008588 MYG1 (ENSNNAG00000008552) #24 VDR (ENSNNAG00000008474) TMEM106C (ENSNNAG00000008329) AGAP2 (ENSNNAG00000007813) TSPAN31 (ENSNNAG00000007737) CDK4 (ENSNNAG00000007706) MARCHF9 (ENSNNAG00000007575) CYP27B1 (ENSNNAG00000007139) METTL1 (ENSNNAG00000007055) EEF1AKMT3 (ENSNNAG00000007036) TSFM (ENSNNAG00000007025) AVIL (ENSNNAG00000006865) ENSNNAG00000012488 CTDSP2 (ENSNNAG00000012418) Elapidae_a ANCESTRAL SPECIES 54 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b.c #9 ENSGT00950000183025.b.b.d #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330 Acanthophiinae ANCESTRAL SPECIES 53 ENSGT00940000160866 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b.c #9 ENSGT00950000183025.b.b.d #9 ENSGT00940000157981.b ENSGT00940000155261 #11 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00940000154360.A.a ENSGT00390000010265 #24 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000158956 ENSGT00940000160351 ENSGT00940000154770 ENSGT00940000158208 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330 Eastern brown snake MODERN SPECIES 72 HOXC9 (ENSPTXG00000007226) HOXC10 (ENSPTXG00000007224) HOXC11 (ENSPTXG00000007223) HOXC12 (ENSPTXG00000007222) #7 HOXC13 (ENSPTXG00000007221) #8 CALCOCO1 (ENSPTXG00000007220) #9 ENSPTXG00000007219 ATF7 (ENSPTXG00000007218) #11 TARBP2 (ENSPTXG00000007217) #14 ENSPTXG00000007216 MAP3K12 (ENSPTXG00000007215) #16 PCBP2 (ENSPTXG00000007214) #17 AMHR2 (ENSPTXG00000007213) #19 SP1 (ENSPTXG00000007212) #20 SP7 (ENSPTXG00000007211) #21 AAAS (ENSPTXG00000007209) #22 ENSPTXG00000007207 MYG1 (ENSPTXG00000007206) #24 VDR (ENSPTXG00000007205) TMEM106C (ENSPTXG00000007204) AGAP2 (ENSPTXG00000007142) TSPAN31 (ENSPTXG00000007141) CDK4 (ENSPTXG00000007140) MARCHF9 (ENSPTXG00000007139) CYP27B1 (ENSPTXG00000007013) METTL1 (ENSPTXG00000007012) EEF1AKMT3 (ENSPTXG00000007011) TSFM (ENSPTXG00000007010) AVIL (ENSPTXG00000006976) CTDSP2 (ENSPTXG00000006974) SLC11A2 (ENSPTXG00000006972) Mainland tiger snake MODERN SPECIES 90 ENSNSUG00000002978 HOXC10 (ENSNSUG00000002979) HOXC11 (ENSNSUG00000002980) HOXC12 (ENSNSUG00000002981) #7 HOXC13 (ENSNSUG00000002982) #8 ENSNSUG00000002983 #9 ENSNSUG00000002984 #9 ENSNSUG00000002985 ATF7 (ENSNSUG00000002987) #11 TARBP2 (ENSNSUG00000003015) #14 ENSNSUG00000003019 MAP3K12 (ENSNSUG00000003022) #16 PCBP2 (ENSNSUG00000003025) #17 SP1 (ENSNSUG00000003037) #20 SP7 (ENSNSUG00000003038) #21 AAAS (ENSNSUG00000003042) #22 MYG1 (ENSNSUG00000003053) #24 VDR (ENSNSUG00000003057) TMEM106C (ENSNSUG00000003116) AGAP2 (ENSNSUG00000003119) TSPAN31 (ENSNSUG00000003179) CDK4 (ENSNSUG00000003180) MARCHF9 (ENSNSUG00000003181) CYP27B1 (ENSNSUG00000003183) METTL1 (ENSNSUG00000003465) EEF1AKMT3 (ENSNSUG00000003482) TSFM (ENSNSUG00000003486) AVIL (ENSNSUG00000003491) CTDSP2 (ENSNSUG00000003501) ENSNSUG00000003503 SLC11A2 (ENSNSUG00000003504) Blue-lipped sea krait MODERN SPECIES 1695 AAAS (ENSLLTG00000012774) #22 ENSLLTG00000012797 Lizard MODERN SPECIES 1148 ENSACAG00000005367 #22 ENSACAG00000005466 ENSACAG00000005470 #24 ENSACAG00000043843 #23 ASB8 (ENSACAG00000005535) PFKM (ENSACAG00000005562) SENP1 (ENSACAG00000005981) ENSACAG00000026660 COL2A1 (ENSACAG00000006064) ENSACAG00000006384 tuatara MODERN SPECIES 497 CALCOCO1 (ENSSPUG00000005381) #9 ENSSPUG00000005824 ATF7 (ENSSPUG00000005836) #11 NPFF (ENSSPUG00000005876) #13 TARBP2 (ENSSPUG00000005895) #14 ENSSPUG00000005915 ENSSPUG00000005922 PCBP2 (ENSSPUG00000006081) #17 SP1 (ENSSPUG00000006229) #20 AAAS (ENSSPUG00000006283) #22 MYG1 (ENSSPUG00000006303) #24 VDR (ENSSPUG00000006324) TMEM106C (ENSSPUG00000006362) COL2A1 (ENSSPUG00000006388) Anura ANCESTRAL SPECIES 3 ENSGT00940000160855 ENSGT00940000160009 ENSGT00940000161307 #7 ENSGT00940000161087 #8 ENSGT00950000183025.b.b #9 ENSGT00940000157981.a.a ENSGT00940000155261 #11 ENSGT00980000202663 ENSGT00940000157748 #14 ENSGT00940000159006 #16 ENSGT00940000154129 #17 ENSGT00940000160885 #19 ENSGT00940000167008 ENSGT00940000157804 #20 ENSGT00940000161293 #21 ENSGT00390000009446 #22 ENSGT00390000010265 #24 ENSGT00390000008783 #23 ENSGT00390000004990 #25 ENSGT00390000012629 #26 ENSGT00940000156458 #27 ENSGT01090000259987.a.a.b #28 ENSGT00940000159609 #29 ENSGT00940000158240 #30 ENSGT00950000183081.a.a.b #31 ENSGT00940000158675 #33 ENSGT00940000163886.B.a ENSGT00940000162738.a.a ENSGT00940000155862.a.b.a.b.a ENSGT00940000162738.b ENSGT00940000161279 Frog MODERN SPECIES 2 calcoco1 (ENSXETG00000031742) #9 ENSXETG00000045047 atp5mc1 (ENSXETG00000016655) atf7 (ENSXETG00000012641) #11 ENSXETG00000035352 tarbp2 (ENSXETG00000012644) #14 ENSXETG00000043101 map3k12 (ENSXETG00000012650) #16 pcbp3 (ENSXETG00000012658) #17 ENSXETG00000040320 ENSXETG00000044113 #19 XB5882685 [provisional:cdca7] (ENSXETG00000033674) sp1 (ENSXETG00000012660) #20 ENSXETG00000043353 sp7 (ENSXETG00000040410) #21 aaas (ENSXETG00000012664) #22 myg1 (ENSXETG00000012666) #24 espl1 (ENSXETG00000012668) #25 mfsd5 (ENSXETG00000012669) #26 rarg (ENSXETG00000012670) #27 itgb7 (ENSXETG00000012671) #28 znf740 (ENSXETG00000025177) #29 csad (ENSXETG00000012672) #30 soat2 (ENSXETG00000001821) #31 spryd3 (ENSXETG00000001822) #33 tns2 (ENSXETG00000001823) eif4b (ENSXETG00000001829) #35 krt18.1 (ENSXETG00000020455) #36 ENSXETG00000035663 krt8.1 (ENSXETG00000020454) krt78.6 (ENSXETG00000024586) Leishan spiny toad MODERN SPECIES 5 CALCOCO1 (ENSLLEG00000005659) #9 ENSLLEG00000005727 ENSLLEG00000005743 ATF7 (ENSLLEG00000005791) #11 TARBP2 (ENSLLEG00000005916) #14 ENSLLEG00000006056 ENSLLEG00000006071 ENSLLEG00000006113 MAP3K12 (ENSLLEG00000006123) #16 ENSLLEG00000006183 PCBP2 (ENSLLEG00000006209) #17 SP1 (ENSLLEG00000006385) #20 AMHR2 (ENSLLEG00000006451) #19 ENSLLEG00000006654 SP7 (ENSLLEG00000006852) #21 AAAS (ENSLLEG00000006896) #22 ENSLLEG00000007190 #24 PFDN5 (ENSLLEG00000007234) #23 ESPL1 (ENSLLEG00000007332) #25 ENSLLEG00000007762 MFSD5 (ENSLLEG00000007773) #26 ENSLLEG00000007786 ENSLLEG00000007797 RARG (ENSLLEG00000007835) #27 ENSLLEG00000007994 ITGB7 (ENSLLEG00000007999) #28 ZNF740 (ENSLLEG00000008065) #29 CSAD (ENSLLEG00000008098) #30 ENSLLEG00000008241 SOAT2 (ENSLLEG00000008275) #31 SPRYD3 (ENSLLEG00000008829) #33