Tetrapoda	ANCESTRAL SPECIES	26	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00980000202663	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000167008	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000163886.B.a	ENSGT00940000161279	ENSGT00940000153993.B
Amniota	ANCESTRAL SPECIES	46	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000163886.B.a	ENSGT00940000161279
Mammalia	ANCESTRAL SPECIES	31	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339
Theria	ANCESTRAL SPECIES	2	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d	ENSGT00940000153339
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Primates	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.c.b
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.c.b
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.c.b.b
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.b	ENSGT00940000153309.c.b.a.a
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748.a #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00860000135570.a.a	ENSGT00940000153336.e.a.a.a.a
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748.a #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000153889.e.b.a.d.b.a #32	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.e
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748.a #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000153889.e.b.a.d.b.a #32	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00860000135570.a.a.c
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748.a #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000153889.e.b.a.d.b.a #32	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00860000135570.a.a.c
Pan	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748.a #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000153889.e.b.a.d.b.a #32	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00860000135570.a.a.c
Bonobo	MODERN SPECIES	3	HOXC10 (ENSPPAG00000035276) #7	HOXC11 (ENSPPAG00000043277) #8	HOXC12 (ENSPPAG00000029866) #9	HOXC13 (ENSPPAG00000035078) #10	CALCOCO1 (ENSPPAG00000029982) #11	ENSPPAG00000037762 #12	ATF7 (ENSPPAG00000036335) #13	NPFF (ENSPPAG00000002483) #14	TARBP2 (ENSPPAG00000030429) #15	MAP3K12 (ENSPPAG00000040619) #16	ENSPPAG00000027632 #17	PRR13 (ENSPPAG00000035773) #18	AMHR2 (ENSPPAG00000027083) #19	SP1 (ENSPPAG00000031675) #20	SP7 (ENSPPAG00000031590) #21	AAAS (ENSPPAG00000043470) #22	MYG1 (ENSPPAG00000041478) #23	PFDN5 (ENSPPAG00000037126) #24	ESPL1 (ENSPPAG00000042460) #25	MFSD5 (ENSPPAG00000035626) #26	ENSPPAG00000025838 #27	RARG (ENSPPAG00000028990) #28	ITGB7 (ENSPPAG00000037612) #29	ZNF740 (ENSPPAG00000030804) #30	CSAD (ENSPPAG00000042278) #31	ENSPPAG00000038939 #32	SOAT2 (ENSPPAG00000040391) #33	IGFBP6 (ENSPPAG00000033673) #34	SPRYD3 (ENSPPAG00000027156) #35	TNS2 (ENSPPAG00000035457) #36	ENSPPAG00000041857 #37
Chimpanzee	MODERN SPECIES	3	HOXC11 (ENSPTRG00000005027) #8	HOXC12 (ENSPTRG00000005026) #9	HOXC13 (ENSPTRG00000005025) #10	CALCOCO1 (ENSPTRG00000005024) #11	ATP5MC2 (ENSPTRG00000005023) #12	ATF7 (ENSPTRG00000005022) #13	NPFF (ENSPTRG00000005021) #14	TARBP2 (ENSPTRG00000005020) #15	MAP3K12 (ENSPTRG00000005019) #16	PCBP2 (ENSPTRG00000005018) #17	ENSPTRG00000049293	PRR13 (ENSPTRG00000029739) #18	AMHR2 (ENSPTRG00000005015) #19	SP1 (ENSPTRG00000005014) #20	SP7 (ENSPTRG00000050925) #21	AAAS (ENSPTRG00000005012) #22	MYG1 (ENSPTRG00000005011) #23	PFDN5 (ENSPTRG00000005010) #24	ESPL1 (ENSPTRG00000005009) #25	MFSD5 (ENSPTRG00000005008) #26	ENSPTRG00000050981 #27	RARG (ENSPTRG00000005007) #28	ITGB7 (ENSPTRG00000005006) #29	ZNF740 (ENSPTRG00000005005) #30	CSAD (ENSPTRG00000005004) #31	ENSPTRG00000048517 #32	ENSPTRG00000052178	SOAT2 (ENSPTRG00000005002) #33	IGFBP6 (ENSPTRG00000005001) #34	SPRYD3 (ENSPTRG00000005000) #35	TNS2 (ENSPTRG00000004999) #36
Human	MODERN SPECIES	3	HOXC11 (ENSG00000123388) #8	HOXC12 (ENSG00000123407) #9	HOXC13 (ENSG00000123364) #10	CALCOCO1 (ENSG00000012822) #11	ATP5MC2 (ENSG00000135390)	ATF7 (ENSG00000170653) #13	ATF7-NPFF (ENSG00000267281)	NPFF (ENSG00000139574) #14	TARBP2 (ENSG00000139546) #15	MAP3K12 (ENSG00000139625) #16	PCBP2 (ENSG00000197111) #17	PRR13 (ENSG00000205352) #18	AMHR2 (ENSG00000135409) #19	SP1 (ENSG00000185591) #20	SP7 (ENSG00000170374) #21	AAAS (ENSG00000094914) #22	MYG1 (ENSG00000139637) #23	PFDN5 (ENSG00000123349) #24	ESPL1 (ENSG00000135476) #25	MFSD5 (ENSG00000182544) #26	ENSG00000283536 #27	RARG (ENSG00000172819) #28	ITGB7 (ENSG00000139626) #29	ZNF740 (ENSG00000139651) #30	CSAD (ENSG00000139631) #31	SOAT2 (ENSG00000167780) #33	IGFBP6 (ENSG00000167779) #34	SPRYD3 (ENSG00000167778) #35	TNS2 (ENSG00000111077) #36	EIF4B (ENSG00000063046)	KRT18 (ENSG00000111057)
Gorilla	MODERN SPECIES	3	HOXC10 (ENSGGOG00000001105) #7	HOXC11 (ENSGGOG00000026566) #8	HOXC12 (ENSGGOG00000023684) #9	HOXC13 (ENSGGOG00000015765) #10	CALCOCO1 (ENSGGOG00000011541) #11	ENSGGOG00000015641 #12	ATF7 (ENSGGOG00000015195) #13	NPFF (ENSGGOG00000012647) #14	TARBP2 (ENSGGOG00000012637) #15	MAP3K12 (ENSGGOG00000012622) #16	PCBP2 (ENSGGOG00000012613) #17	PRR13 (ENSGGOG00000012608) #18	AMHR2 (ENSGGOG00000012599) #19	SP1 (ENSGGOG00000012593) #20	SP7 (ENSGGOG00000015818) #21	AAAS (ENSGGOG00000015799) #22	MYG1 (ENSGGOG00000015795) #23	PFDN5 (ENSGGOG00000026308) #24	ESPL1 (ENSGGOG00000001600) #25	MFSD5 (ENSGGOG00000004121) #26	ENSGGOG00000039229 #27	RARG (ENSGGOG00000003215) #28	ITGB7 (ENSGGOG00000006795) #29	ZNF740 (ENSGGOG00000006790) #30	CSAD (ENSGGOG00000014976) #31	ENSGGOG00000024256 #32	SOAT2 (ENSGGOG00000003146) #33	IGFBP6 (ENSGGOG00000003143) #34	SPRYD3 (ENSGGOG00000014874) #35	TNS2 (ENSGGOG00000014860) #36	EIF4B (ENSGGOG00000013695)
Orangutan	MODERN SPECIES	3	HOXC10 (ENSPPYG00000004591) #7	ENSPPYG00000004590 #8	HOXC12 (ENSPPYG00000004589) #9	HOXC13 (ENSPPYG00000004588) #10	CALCOCO1 (ENSPPYG00000004587) #11	ATP5MC2 (ENSPPYG00000004586) #12	ATF7 (ENSPPYG00000004585) #13	NPFF (ENSPPYG00000004584) #14	TARBP2 (ENSPPYG00000004583) #15	MAP3K12 (ENSPPYG00000004582) #16	PCBP2 (ENSPPYG00000004581) #17	PRR13 (ENSPPYG00000034305) #18	AMHR2 (ENSPPYG00000004580) #19	SP1 (ENSPPYG00000004579) #20	SP7 (ENSPPYG00000040679) #21	AAAS (ENSPPYG00000004577) #22	MYG1 (ENSPPYG00000004576) #23	PFDN5 (ENSPPYG00000004575) #24	ESPL1 (ENSPPYG00000004574) #25	MFSD5 (ENSPPYG00000004573) #26	ENSPPYG00000039523 #27	RARG (ENSPPYG00000004572) #28	ITGB7 (ENSPPYG00000004571) #29	ZNF740 (ENSPPYG00000035927) #30	CSAD (ENSPPYG00000004569) #31	ENSPPYG00000040758 #32	SOAT2 (ENSPPYG00000004568) #33	ENSPPYG00000004567 #34	SPRYD3 (ENSPPYG00000004566) #35	TNS2 (ENSPPYG00000004565) #36	ENSPPYG00000025848
Gibbon	MODERN SPECIES	1	HOXC10 (ENSNLEG00000017679) #7	ENSNLEG00000035339 #8	HOXC12 (ENSNLEG00000017683) #9	HOXC13 (ENSNLEG00000017680) #10	CALCOCO1 (ENSNLEG00000017685) #11	ENSNLEG00000017686 #12	ENSNLEG00000017688 #13	NPFF (ENSNLEG00000017689) #14	TARBP2 (ENSNLEG00000017690) #15	MAP3K12 (ENSNLEG00000017692) #16	PCBP2 (ENSNLEG00000017693) #17	PRR13 (ENSNLEG00000034057) #18	AMHR2 (ENSNLEG00000017698) #19	SP1 (ENSNLEG00000017699) #20	SP7 (ENSNLEG00000017701) #21	AAAS (ENSNLEG00000017702) #22	MYG1 (ENSNLEG00000017704) #23	PFDN5 (ENSNLEG00000017706) #24	ESPL1 (ENSNLEG00000017709) #25	MFSD5 (ENSNLEG00000017713) #26	ENSNLEG00000031387 #27	RARG (ENSNLEG00000017714) #28	ITGB7 (ENSNLEG00000017715) #29	ZNF740 (ENSNLEG00000017717) #30	CSAD (ENSNLEG00000017718) #31	ENSNLEG00000029784 ##32	SOAT2 (ENSNLEG00000017720) #33	IGFBP6 (ENSNLEG00000017722) #34	SPRYD3 (ENSNLEG00000017724) #35	TNS2 (ENSNLEG00000017725) #36	EIF4B (ENSNLEG00000017727)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000008783.l #24	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.b
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000008783.l #24	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.b
Vervet Monkey	MODERN SPECIES	2	HOXC10 (ENSCSAG00000005455) #7	HOXC11 (ENSCSAG00000005457) #8	HOXC12 (ENSCSAG00000005459) #9	HOXC13 (ENSCSAG00000005461) #10	CALCOCO1 (ENSCSAG00000005466) #11	ENSCSAG00000005468 #12	ATF7 (ENSCSAG00000005473) #13	NPFF (ENSCSAG00000005475) #14	TARBP2 (ENSCSAG00000005479) #15	MAP3K12 (ENSCSAG00000005483) #16	ENSCSAG00000005487 #17	PRR13 (ENSCSAG00000005490) #18	AMHR2 (ENSCSAG00000005495) #19	SP1 (ENSCSAG00000005498) #20	SP7 (ENSCSAG00000019258) #21	ENSCSAG00000005499 #22	PFDN5 (ENSCSAG00000005502) #24	MYG1 (ENSCSAG00000005511) #23	ESPL1 (ENSCSAG00000005520) #25	MFSD5 (ENSCSAG00000019257) #26	RARG (ENSCSAG00000005525) #28	ITGB7 (ENSCSAG00000005529) #29	ZNF740 (ENSCSAG00000005533) #30	CSAD (ENSCSAG00000005538) #31	SOAT2 (ENSCSAG00000005549) #33	IGFBP6 (ENSCSAG00000005554) #34	SPRYD3 (ENSCSAG00000005555) #35	TNS2 (ENSCSAG00000005561) #36	EIF4B (ENSCSAG00000005574)	ENSCSAG00000005581	KRT78 (ENSCSAG00000005588)
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.b	ENSGT00940000153309.c.b.a.a.b.b
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.b	ENSGT00940000153309.c.b.a.a.b.a.b.a.b.a.b.a.a.b
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.c.b.a.a.b.a.b.a.a
Crab-eating macaque	MODERN SPECIES	2	ENSMFAG00000039005 #8	HOXC12 (ENSMFAG00000002263) #9	HOXC13 (ENSMFAG00000062591) #10	ENSMFAG00000043577	CALCOCO1 (ENSMFAG00000002103) #11	ENSMFAG00000045028 #12	ATF7 (ENSMFAG00000002429) #13	NPFF (ENSMFAG00000007389) #14	TARBP2 (ENSMFAG00000013567) #15	MAP3K12 (ENSMFAG00000043896) #16	ENSMFAG00000044356 #17	PRR13 (ENSMFAG00000040262) #18	AMHR2 (ENSMFAG00000040829) #19	SP1 (ENSMFAG00000045267) #20	SP7 (ENSMFAG00000048583) #21	AAAS (ENSMFAG00000039804) #22	MYG1 (ENSMFAG00000031782) #23	PFDN5 (ENSMFAG00000003143) #24	ESPL1 (ENSMFAG00000031428) #25	MFSD5 (ENSMFAG00000045867) #26	RARG (ENSMFAG00000016523) #28	ITGB7 (ENSMFAG00000044578) #29	ZNF740 (ENSMFAG00000051716) #30	CSAD (ENSMFAG00000031711) #31	ENSMFAG00000059940	ENSMFAG00000057147	SOAT2 (ENSMFAG00000033078) #33	IGFBP6 (ENSMFAG00000000085) #34	SPRYD3 (ENSMFAG00000033467) #35	TNS2 (ENSMFAG00000032151) #36	EIF4B (ENSMFAG00000037195)
Rhesus	MODERN SPECIES	2	HOXC9 (ENSMMUG00000063144)	HOXC10 (ENSMMUG00000000925) #7	HOXC11 (ENSMMUG00000000924) #8	HOXC12 (ENSMMUG00000004541) #9	HOXC13 (ENSMMUG00000054600) #10	CALCOCO1 (ENSMMUG00000009457) #11	ATP5MC2 (ENSMMUG00000016241) #12	ATF7 (ENSMMUG00000022313) #13	TARBP2 (ENSMMUG00000018492) #15	MAP3K12 (ENSMMUG00000006613) #16	ENSMMUG00000006608 #17	PRR13 (ENSMMUG00000017738) #18	AMHR2 (ENSMMUG00000020037) #19	SP1 (ENSMMUG00000020036) #20	SP7 (ENSMMUG00000052817) #21	AAAS (ENSMMUG00000022036) #22	MYG1 (ENSMMUG00000022034) #23	PFDN5 (ENSMMUG00000022030) #24	ESPL1 (ENSMMUG00000022021) #25	MFSD5 (ENSMMUG00000022020) #26	ENSMMUG00000065110 #27	RARG (ENSMMUG00000022017) #28	ITGB7 (ENSMMUG00000005245) #29	ZNF740 (ENSMMUG00000005246) #30	CSAD (ENSMMUG00000015153) #31	SOAT2 (ENSMMUG00000020339) #33	IGFBP6 (ENSMMUG00000051123) #34	SPRYD3 (ENSMMUG00000000329) #35	TNS2 (ENSMMUG00000000318) #36	EIF4B (ENSMMUG00000001062)	ENSMMUG00000031911
Pig-tailed macaque	MODERN SPECIES	526	HOXC11 (ENSMNEG00000041343) #8	HOXC12 (ENSMNEG00000028886) #9	HOXC13 (ENSMNEG00000044057) #10	ENSMNEG00000028594	CALCOCO1 (ENSMNEG00000044215) #11	ENSMNEG00000039677 #12	ATF7 (ENSMNEG00000042742) #13	NPFF (ENSMNEG00000043486) #14	TARBP2 (ENSMNEG00000036477) #15	MAP3K12 (ENSMNEG00000038360) #16	ENSMNEG00000031958 #17	PRR13 (ENSMNEG00000029804) #18	AMHR2 (ENSMNEG00000042822) #19	SP1 (ENSMNEG00000041302) #20	SP7 (ENSMNEG00000030296) #21	AAAS (ENSMNEG00000028301) #22	MYG1 (ENSMNEG00000041952) #23	ENSMNEG00000038567 #24	ESPL1 (ENSMNEG00000039047) #25	MFSD5 (ENSMNEG00000045251) #26	RARG (ENSMNEG00000031617) #28	ITGB7 (ENSMNEG00000029882) #29	ZNF740 (ENSMNEG00000038972) #30	CSAD (ENSMNEG00000029398) #31	SOAT2 (ENSMNEG00000038339) #33	IGFBP6 (ENSMNEG00000041594) #34	SPRYD3 (ENSMNEG00000040414) #35	TNS2 (ENSMNEG00000031140) #36	ENSMNEG00000029195	ENSMNEG00000037680	ENSMNEG00000041804
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.a	ENSGT00940000153309.c.b.a.a.b.b	ENSGT01040000241613
Olive baboon	MODERN SPECIES	19	HOXC11 (ENSPANG00000016365) #8	HOXC12 (ENSPANG00000010379) #9	HOXC13 (ENSPANG00000002383) #10	CALCOCO1 (ENSPANG00000011373) #11	ENSPANG00000014072 #12	ATF7 (ENSPANG00000013986) #13	NPFF (ENSPANG00000013483) #14	TARBP2 (ENSPANG00000010689) #15	AMHR2 (ENSPANG00000017127) #19	PRR13 (ENSPANG00000022134) #18	PCBP2 (ENSPANG00000029560) #17	MAP3K12 (ENSPANG00000020580) #16	SP1 (ENSPANG00000018241) #20	ENSPANG00000049962	SP7 (ENSPANG00000014421) #21	AAAS (ENSPANG00000012540) #22	MYG1 (ENSPANG00000012627) #23	PFDN5 (ENSPANG00000005796) #24	ESPL1 (ENSPANG00000022963) #25	MFSD5 (ENSPANG00000002873) #26	ENSPANG00000037729 #27	ENSPANG00000041548	RARG (ENSPANG00000022411) #28	ITGB7 (ENSPANG00000013193) #29	ZNF740 (ENSPANG00000018242) #30	CSAD (ENSPANG00000020843) #31	SOAT2 (ENSPANG00000014885) #33	IGFBP6 (ENSPANG00000004243) #34	ENSPANG00000014458	TNS2 (ENSPANG00000014073) #36	SPRYD3 (ENSPANG00000011605) #35
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.a	ENSGT00940000153309.c.b.a.a.b.b	ENSGT01040000241613
Sooty mangabey	MODERN SPECIES	571	HOXC6 (ENSCATG00000004493)	HOXC8 (ENSCATG00000043163)	HOXC12 (ENSCATG00000041764) #9	HOXC13 (ENSCATG00000013447) #10	CALCOCO1 (ENSCATG00000029411) #11	ENSCATG00000031402 #12	ATF7 (ENSCATG00000016814) #13	NPFF (ENSCATG00000043924) #14	TARBP2 (ENSCATG00000026344) #15	MAP3K12 (ENSCATG00000038068) #16	PCBP2 (ENSCATG00000036013) #17	PRR13 (ENSCATG00000043426) #18	AMHR2 (ENSCATG00000002460) #19	SP1 (ENSCATG00000017070) #20	SP7 (ENSCATG00000035712) #21	AAAS (ENSCATG00000043842) #22	MYG1 (ENSCATG00000041234) #23	ENSCATG00000041179 #24	ESPL1 (ENSCATG00000040354) #25	MFSD5 (ENSCATG00000042670) #26	RARG (ENSCATG00000038973) #28	ITGB7 (ENSCATG00000039968) #29	ZNF740 (ENSCATG00000034973) #30	CSAD (ENSCATG00000024517) #31	SOAT2 (ENSCATG00000030834) #33	IGFBP6 (ENSCATG00000001828) #34	SPRYD3 (ENSCATG00000042509) #35	TNS2 (ENSCATG00000039493) #36	ENSCATG00000032007	ENSCATG00000009708	ENSCATG00000039075
Drill	MODERN SPECIES	235														SP1 (ENSMLEG00000042683) #20	SP7 (ENSMLEG00000029733) #21	AAAS (ENSMLEG00000037326) #22	MYG1 (ENSMLEG00000043408) #23	ENSMLEG00000034937 #24	ESPL1 (ENSMLEG00000016446) #25	MFSD5 (ENSMLEG00000036087) #26	RARG (ENSMLEG00000025257) #28	ITGB7 (ENSMLEG00000023677) #29	ZNF740 (ENSMLEG00000007040) #30	CSAD (ENSMLEG00000039097) #31	SOAT2 (ENSMLEG00000039805) #33	IGFBP6 (ENSMLEG00000033891) #34	SPRYD3 (ENSMLEG00000038760) #35	TNS2 (ENSMLEG00000035686) #36	EIF4B (ENSMLEG00000023226)	ENSMLEG00000037665	ENSMLEG00000043460
Rhinopithecus	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.k.a.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00860000135570.a.a.a	ENSGT00860000135570.a.a.b	ENSGT00940000153336.e.a.a.a.a
Golden snub-nosed monkey	MODERN SPECIES	1766	HOXC10 (ENSRROG00000043103) #7	HOXC11 (ENSRROG00000045396) #8	HOXC12 (ENSRROG00000039382) #9	HOXC13 (ENSRROG00000038970) #10	CALCOCO1 (ENSRROG00000035160) #11	ENSRROG00000017152 #12	ATF7 (ENSRROG00000031964) #13	NPFF (ENSRROG00000042539) #14	TARBP2 (ENSRROG00000044783) #15	MAP3K12 (ENSRROG00000029455) #16	PCBP2 (ENSRROG00000041377) #17	ENSRROG00000043448 #18	AMHR2 (ENSRROG00000035137) #19	SP1 (ENSRROG00000029551) #20	SP7 (ENSRROG00000029296) #21	AAAS (ENSRROG00000040227) #22	MYG1 (ENSRROG00000030453) #23	ENSRROG00000042206 #24	ESPL1 (ENSRROG00000043464) #25	MFSD5 (ENSRROG00000037319) #26	RARG (ENSRROG00000034892) #28	ENSRROG00000007396	ITGB7 (ENSRROG00000028868) #29	ZNF740 (ENSRROG00000037136) #30	CSAD (ENSRROG00000036761) #31	SOAT2 (ENSRROG00000043344) #33	IGFBP6 (ENSRROG00000028720) #34	SPRYD3 (ENSRROG00000036435) #35	TNS2 (ENSRROG00000040696) #36	EIF4B (ENSRROG00000033336)	ENSRROG00000038431
Black snub-nosed monkey	MODERN SPECIES	2207												ENSRBIG00000043837	AMHR2 (ENSRBIG00000044077) #19	SP1 (ENSRBIG00000041532) #20	SP7 (ENSRBIG00000039181) #21	AAAS (ENSRBIG00000040686) #22	MYG1 (ENSRBIG00000033203) #23	ENSRBIG00000033437 #24	ESPL1 (ENSRBIG00000007935) #25	MFSD5 (ENSRBIG00000038377) #26	RARG (ENSRBIG00000027890) #28	ITGB7 (ENSRBIG00000034526) #29	ZNF740 (ENSRBIG00000029862) #30	CSAD (ENSRBIG00000043791) #31	SOAT2 (ENSRBIG00000041879) #33	IGFBP6 (ENSRBIG00000040978) #34	SPRYD3 (ENSRBIG00000038184) #35	TNS2 (ENSRBIG00000038773) #36	EIF4B (ENSRBIG00000043823)	ENSRBIG00000030342	ENSRBIG00000033351
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.i.d	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.w #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.n #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.g	ENSGT00940000153309.c.b.a.b.a.a.a.a
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.i.d	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.w #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.n.a.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.g	ENSGT00940000153309.c.b.a.b.a.a.a.a
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.i.d.b	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.w #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.n.a.a.c #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a.g	ENSGT00940000153309.c.b.a.b.a.a.a.a	ENSGT01100000266501
Bolivian squirrel monkey	MODERN SPECIES	153	HOXC9 (ENSSBOG00000027042)	HOXC10 (ENSSBOG00000034914) #7	HOXC11 (ENSSBOG00000031215) #8	HOXC12 (ENSSBOG00000028822) #9	CALCOCO1 (ENSSBOG00000033966) #11	ENSSBOG00000012565	ATF7 (ENSSBOG00000025454) #13	NPFF (ENSSBOG00000028463) #14	TARBP2 (ENSSBOG00000027305) #15	MAP3K12 (ENSSBOG00000035393) #16	PCBP2 (ENSSBOG00000020308) #17	PRR13 (ENSSBOG00000024818) #18	AMHR2 (ENSSBOG00000027918) #19	SP1 (ENSSBOG00000022096) #20	SP7 (ENSSBOG00000034582) #21	AAAS (ENSSBOG00000025082) #22	MYG1 (ENSSBOG00000011763) #23	ENSSBOG00000031586 #24	ESPL1 (ENSSBOG00000035678) #25	MFSD5 (ENSSBOG00000004420) #26	RARG (ENSSBOG00000033172) #28	ITGB7 (ENSSBOG00000022839) #29	ZNF740 (ENSSBOG00000034251) #30	CSAD (ENSSBOG00000023095) #31	SOAT2 (ENSSBOG00000034893) #33	IGFBP6 (ENSSBOG00000030141) #34	SPRYD3 (ENSSBOG00000022719) #35	TNS2 (ENSSBOG00000031927) #36	EIF4B (ENSSBOG00000026444)	ENSSBOG00000035078	ENSSBOG00000020319
Capuchin	MODERN SPECIES	285	HOXC10 (ENSCCAG00000037870) #7	HOXC11 (ENSCCAG00000020099) #8	HOXC12 (ENSCCAG00000035755) #9	HOXC13 (ENSCCAG00000023554) #10	CALCOCO1 (ENSCCAG00000035008) #11	ENSCCAG00000036221	ATF7 (ENSCCAG00000034241) #13	NPFF (ENSCCAG00000034365) #14	TARBP2 (ENSCCAG00000033025) #15	MAP3K12 (ENSCCAG00000036528) #16	PCBP2 (ENSCCAG00000012038) #17	PRR13 (ENSCCAG00000036400) #18	AMHR2 (ENSCCAG00000023375) #19	SP1 (ENSCCAG00000038082) #20	SP7 (ENSCCAG00000032917) #21	AAAS (ENSCCAG00000032957) #22	MYG1 (ENSCCAG00000031836) #23	ENSCCAG00000037724 #24	ENSCCAG00000020775	ESPL1 (ENSCCAG00000024910) #25	MFSD5 (ENSCCAG00000029742) #26	RARG (ENSCCAG00000027904) #28	ITGB7 (ENSCCAG00000027453) #29	ZNF740 (ENSCCAG00000023745) #30	CSAD (ENSCCAG00000024214) #31	SOAT2 (ENSCCAG00000009578) #33	IGFBP6 (ENSCCAG00000035277) #34	SPRYD3 (ENSCCAG00000028334) #35	TNS2 (ENSCCAG00000032183) #36	ENSCCAG00000035872	ENSCCAG00000026462
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	21	HOXC12 (ENSCJAG00000018806) #9	HOXC13 (ENSCJAG00000044250) #10	CALCOCO1 (ENSCJAG00000018726) #11	ENSCJAG00000086022	ATP5MC2 (ENSCJAG00000039433)	ATF7 (ENSCJAG00000018699) #13	NPFF (ENSCJAG00000018696) #14	TARBP2 (ENSCJAG00000018668) #15	MAP3K12 (ENSCJAG00000018634) #16	ENSCJAG00000018590 #17	ENSCJAG00000072130 #18	AMHR2 (ENSCJAG00000018563) #19	SP1 (ENSCJAG00000018553) #20	ENSCJAG00000041364	SP7 (ENSCJAG00000018549) #21	ENSCJAG00000018507 #22	MYG1 (ENSCJAG00000018493) #23	ENSCJAG00000018477 #24	ENSCJAG00000082926	ESPL1 (ENSCJAG00000018446) #25	MFSD5 (ENSCJAG00000018442) #26	ENSCJAG00000046838 #27	RARG (ENSCJAG00000018408) #28	ITGB7 (ENSCJAG00000018387) #29	ZNF740 (ENSCJAG00000044519) #30	CSAD (ENSCJAG00000018351) #31	SOAT2 (ENSCJAG00000018319) #33	IGFBP6 (ENSCJAG00000018309) #34	SPRYD3 (ENSCJAG00000018286) #35	TNS2 (ENSCJAG00000018241) #36	EIF4B (ENSCJAG00000018176)
Marmoset	MODERN SPECIES	3	HNRNPF (ENSCJAG00000008291)	RASGEF1A (ENSCJAG00000016210)	CSGALNACT2 (ENSCJAG00000016195)	RET (ENSCJAG00000016166)	ENSCJAG00000070828	ENSCJAG00000045167	ENSCJAG00000082778	ENSCJAG00000064808	ENSCJAG00000054685	ENSCJAG00000082272	ENSCJAG00000066699	ENSCJAG00000071128	ENSCJAG00000070932	ENSCJAG00000021249	ENSCJAG00000072339	ENSCJAG00000000767 #22	ZNF37A (ENSCJAG00000079448)	ENSCJAG00000067735	ZNF25 (ENSCJAG00000047737)	ENSCJAG00000039609	ZNF248 (ENSCJAG00000048147)	ENSCJAG00000046022	ZNF267 (ENSCJAG00000054634)	ENSCJAG00000067358	AHSP (ENSCJAG00000000814)	RUSF1 (ENSCJAG00000000816)	SLC5A2 (ENSCJAG00000000834)	TGFB1I1 (ENSCJAG00000000840)	ARMC5 (ENSCJAG00000000862)	ENSCJAG00000000876	ENSCJAG00000072621
Mas night monkey	MODERN SPECIES	1031	HOXC11 (ENSANAG00000032883) #8	HOXC12 (ENSANAG00000032833) #9	HOXC13 (ENSANAG00000032093) #10	CALCOCO1 (ENSANAG00000022801) #11	ENSANAG00000035655	ATF7 (ENSANAG00000032521) #13	NPFF (ENSANAG00000031895) #14	TARBP2 (ENSANAG00000034453) #15	MAP3K12 (ENSANAG00000020253) #16	PCBP2 (ENSANAG00000032275) #17	PRR13 (ENSANAG00000026491) #18	AMHR2 (ENSANAG00000033465) #19	ENSANAG00000011194	SP1 (ENSANAG00000031483) #20	SP7 (ENSANAG00000020784) #21	AAAS (ENSANAG00000026936) #22	MYG1 (ENSANAG00000033276) #23	ENSANAG00000026581	ENSANAG00000036915	ESPL1 (ENSANAG00000022743) #25	MFSD5 (ENSANAG00000007415) #26	RARG (ENSANAG00000035586) #28	ITGB7 (ENSANAG00000030851) #29	ZNF740 (ENSANAG00000036013) #30	CSAD (ENSANAG00000026031) #31	SOAT2 (ENSANAG00000024453) #33	IGFBP6 (ENSANAG00000027039) #34	SPRYD3 (ENSANAG00000024966) #35	TNS2 (ENSANAG00000029871) #36	ENSANAG00000021956	ENSANAG00000024649
Tarsier	MODERN SPECIES	2155															SP7 (ENSTSYG00000027614) #21	AAAS (ENSTSYG00000000735) #22	MYG1 (ENSTSYG00000000734) #23	PFDN5 (ENSTSYG00000031479) #24	ESPL1 (ENSTSYG00000011226) #25
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.d
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.d
Mouse lemur	MODERN SPECIES	29	HOXC12 (ENSMICG00000011709) #9	HOXC13 (ENSMICG00000042545) #10	CALCOCO1 (ENSMICG00000011694) #11	ENSMICG00000011686 #12	ENSMICG00000045673	ATF7 (ENSMICG00000011677) #13	NPFF (ENSMICG00000047279) #14	TARBP2 (ENSMICG00000027441) #15	MAP3K12 (ENSMICG00000011662) #16	ENSMICG00000011651 #17	ENSMICG00000042073	AMHR2 (ENSMICG00000011633) #19	ENSMICG00000041676 #20	SP1 (ENSMICG00000035082) #20	SP7 (ENSMICG00000038102) #21	AAAS (ENSMICG00000014285) #22	MYG1 (ENSMICG00000014281) #23	PFDN5 (ENSMICG00000014277) #24	ESPL1 (ENSMICG00000014243) #25	MFSD5 (ENSMICG00000014231) #26	RARG (ENSMICG00000014220) #28	ITGB7 (ENSMICG00000014197) #29	ZNF740 (ENSMICG00000014191) #30	CSAD (ENSMICG00000014180) #31	SOAT2 (ENSMICG00000014163) #33	IGFBP6 (ENSMICG00000041428) #34	SPRYD3 (ENSMICG00000014150) #35	TNS2 (ENSMICG00000014125) #36	ENSMICG00000033915	ENSMICG00000002255	ENSMICG00000042427
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.a.a.a.a	ENSGT00940000153309.d
Coquerels sifaka	MODERN SPECIES	91	HOXC10 (ENSPCOG00000017406) #7	HOXC11 (ENSPCOG00000015117) #8	HOXC12 (ENSPCOG00000024756) #9	HOXC13 (ENSPCOG00000027689) #10	CALCOCO1 (ENSPCOG00000028080) #11	ENSPCOG00000016053 #12	ATF7 (ENSPCOG00000018139) #13	NPFF (ENSPCOG00000024092) #14	TARBP2 (ENSPCOG00000013102) #15	MAP3K12 (ENSPCOG00000027308) #16	PCBP2 (ENSPCOG00000025737) #17	PRR13 (ENSPCOG00000025138) #18	AMHR2 (ENSPCOG00000017741) #19	SP1 (ENSPCOG00000025912) #20	SP7 (ENSPCOG00000014948) #21	AAAS (ENSPCOG00000014719) #22	MYG1 (ENSPCOG00000026269) #23	PFDN5 (ENSPCOG00000020283) #24	ESPL1 (ENSPCOG00000016146) #25	MFSD5 (ENSPCOG00000003152) #26	RARG (ENSPCOG00000019459) #28	ITGB7 (ENSPCOG00000013758) #29	ZNF740 (ENSPCOG00000022742) #30	CSAD (ENSPCOG00000016019) #31	SOAT2 (ENSPCOG00000018664) #33	IGFBP6 (ENSPCOG00000014603) #34	SPRYD3 (ENSPCOG00000028428) #35	TNS2 (ENSPCOG00000027013) #36	ENSPCOG00000007039	ENSPCOG00000028253	ENSPCOG00000022837
Greater bamboo lemur	MODERN SPECIES	516						ATF7 (ENSPSMG00000018932) #13	NPFF (ENSPSMG00000018955) #14	TARBP2 (ENSPSMG00000018983) #15	MAP3K12 (ENSPSMG00000019104) #16	ENSPSMG00000019281 #17	PRR13 (ENSPSMG00000019577) #18	ENSPSMG00000019585	AMHR2 (ENSPSMG00000019625) #19	SP1 (ENSPSMG00000019633) #20	SP7 (ENSPSMG00000019647) #21	AAAS (ENSPSMG00000019719) #22	MYG1 (ENSPSMG00000019787) #23	PFDN5 (ENSPSMG00000019833) #24	ESPL1 (ENSPSMG00000019895) #25	MFSD5 (ENSPSMG00000019914) #26	ENSPSMG00000019918 #27	RARG (ENSPSMG00000020029) #28	ITGB7 (ENSPSMG00000020120) #29	ZNF740 (ENSPSMG00000020129) #30	CSAD (ENSPSMG00000020166) #31	SOAT2 (ENSPSMG00000020201) #33	IGFBP6 (ENSPSMG00000020220) #34	SPRYD3 (ENSPSMG00000020290) #35	TNS2 (ENSPSMG00000020515) #36	ENSPSMG00000020651
Bushbaby	MODERN SPECIES	158	HOXC8 (ENSOGAG00000003619)	HOXC9 (ENSOGAG00000003616)	HOXC10 (ENSOGAG00000003615) #7	HOXC11 (ENSOGAG00000029804) #8	HOXC12 (ENSOGAG00000025383) #9	HOXC13 (ENSOGAG00000030391) #10	CALCOCO1 (ENSOGAG00000003612) #11	ENSOGAG00000003611 #12	ATF7 (ENSOGAG00000001748) #13	TARBP2 (ENSOGAG00000001744) #15	MAP3K12 (ENSOGAG00000001739) #16	PRR13 (ENSOGAG00000001734) #18	AMHR2 (ENSOGAG00000028440) #19	SP1 (ENSOGAG00000031759) #20	SP7 (ENSOGAG00000032371) #21	AAAS (ENSOGAG00000009477) #22	MYG1 (ENSOGAG00000009469) #23	ENSOGAG00000009463 #24	ESPL1 (ENSOGAG00000009447) #25	MFSD5 (ENSOGAG00000009445) #26	RARG (ENSOGAG00000026655) #28	ITGB7 (ENSOGAG00000014673) #29	ZNF740 (ENSOGAG00000025330) #30	CSAD (ENSOGAG00000005244) #31	SOAT2 (ENSOGAG00000005242) #33	IGFBP6 (ENSOGAG00000005239) #34	SPRYD3 (ENSOGAG00000012481) #35	TNS2 (ENSOGAG00000012472) #36	EIF4B (ENSOGAG00000012459)	ENSOGAG00000006237	ENSOGAG00000032490
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Tree shrew	MODERN SPECIES	1927																AAAS (ENSTBEG00000016689) #22	MYG1 (ENSTBEG00000016469) #23	PFDN5 (ENSTBEG00000016436) #24	ESPL1 (ENSTBEG00000015912) #25	RARG (ENSTBEG00000015684) #28	ENSTBEG00000015560	ZNF740 (ENSTBEG00000015437) #30	CSAD (ENSTBEG00000015284) #31
Glires	ANCESTRAL SPECIES	4	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Lagomorpha	ANCESTRAL SPECIES	30	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d	ENSGT01070000255698
Rabbit	MODERN SPECIES	15	HOXC10 (ENSOCUG00000015176) #7	HOXC11 (ENSOCUG00000001159) #8	HOXC12 (ENSOCUG00000001157) #9	CALCOCO1 (ENSOCUG00000008943) #11	ENSOCUG00000008933 #12	ENSOCUG00000022568	ATF7 (ENSOCUG00000005707) #13	NPFF (ENSOCUG00000026663) #14	TARBP2 (ENSOCUG00000005700) #15	MAP3K12 (ENSOCUG00000005689) #16	PCBP2 (ENSOCUG00000022490) #17	ENSOCUG00000035898	AMHR2 (ENSOCUG00000004151) #19	SP1 (ENSOCUG00000004147) #20	SP7 (ENSOCUG00000003811) #21	AAAS (ENSOCUG00000011288) #22	MYG1 (ENSOCUG00000011280) #23	PFDN5 (ENSOCUG00000011275) #24	ESPL1 (ENSOCUG00000011244) #25	MFSD5 (ENSOCUG00000011242) #26	ENSOCUG00000001432 #28	ITGB7 (ENSOCUG00000001426) #29	ZNF740 (ENSOCUG00000001422) #30	ENSOCUG00000004445	CSAD (ENSOCUG00000001419) #31	SOAT2 (ENSOCUG00000001415) #33	IGFBP6 (ENSOCUG00000001412) #34	SPRYD3 (ENSOCUG00000016826) #35	ENSOCUG00000013484	ENSOCUG00000027691	ENSOCUG00000035148
Pika	MODERN SPECIES	1328															ENSOPRG00000015704 #21	AAAS (ENSOPRG00000015680) #22	MYG1 (ENSOPRG00000015655) #23	PFDN5 (ENSOPRG00000015638) #24	ENSOPRG00000015584 #25
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m.y #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d	ENSGT00940000153339.b
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m.y #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d	ENSGT00940000153339.b.u
Hystricomorpha_b	ANCESTRAL SPECIES	53	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129.m.y #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d	ENSGT00940000153339.b.u
Long-tailed chinchilla	MODERN SPECIES	165	HOXC10 (ENSCLAG00000010877) #7	HOXC11 (ENSCLAG00000010432) #8	HOXC12 (ENSCLAG00000012849) #9	HOXC13 (ENSCLAG00000012400) #10	CALCOCO1 (ENSCLAG00000008505) #11	ENSCLAG00000010492 #12	ATF7 (ENSCLAG00000009615) #13	NPFF (ENSCLAG00000007501) #14	TARBP2 (ENSCLAG00000009175) #15	MAP3K12 (ENSCLAG00000007958) #16	ENSCLAG00000012230 #17	ENSCLAG00000011497	AMHR2 (ENSCLAG00000010183) #19	SP1 (ENSCLAG00000007425) #20	SP7 (ENSCLAG00000012354) #21	AAAS (ENSCLAG00000010660) #22	MYG1 (ENSCLAG00000012669) #23	PFDN5 (ENSCLAG00000012087) #24	ESPL1 (ENSCLAG00000007332) #25	MFSD5 (ENSCLAG00000010550) #26	RARG (ENSCLAG00000007433) #28	ITGB7 (ENSCLAG00000009316) #29	ZNF740 (ENSCLAG00000010938) #30	CSAD (ENSCLAG00000009330) #31	SOAT2 (ENSCLAG00000014123) #33	IGFBP6 (ENSCLAG00000011244) #34	SPRYD3 (ENSCLAG00000009291) #35	TNS2 (ENSCLAG00000009285) #36	ENSCLAG00000013741	KRT18 (ENSCLAG00000016350)	KRT78 (ENSCLAG00000009595)
Degu	MODERN SPECIES	134	HOXC11 (ENSODEG00000013494) #8	HOXC12 (ENSODEG00000013405) #9	HOXC13 (ENSODEG00000013741) #10	ENSODEG00000020085	CALCOCO1 (ENSODEG00000013989) #11	ENSODEG00000013371 #12	ATF7 (ENSODEG00000014081) #13	ENSODEG00000013431	TARBP2 (ENSODEG00000013413) #15	MAP3K12 (ENSODEG00000013787) #16	ENSODEG00000013186 #17	ENSODEG00000012995	AMHR2 (ENSODEG00000013644) #19	SP1 (ENSODEG00000013583) #20	SP7 (ENSODEG00000013161) #21	AAAS (ENSODEG00000012591) #22	MYG1 (ENSODEG00000013685) #23	ENSODEG00000013601 #24	ESPL1 (ENSODEG00000014509) #25	MFSD5 (ENSODEG00000014360) #26	RARG (ENSODEG00000012669) #28	ITGB7 (ENSODEG00000013660) #29	ZNF740 (ENSODEG00000014638) #30	CSAD (ENSODEG00000013041) #31	SOAT2 (ENSODEG00000013152) #33	IGFBP6 (ENSODEG00000013565) #34	SPRYD3 (ENSODEG00000012727) #35	TNS2 (ENSODEG00000014711) #36	ENSODEG00000012941	ENSODEG00000012306	ENSODEG00000013629
Naked mole-rat female	MODERN SPECIES	8	HOXC9 (ENSHGLG00000002316)	HOXC10 (ENSHGLG00000002263) #7	HOXC11 (ENSHGLG00000002244) #8	HOXC12 (ENSHGLG00000002214) #9	HOXC13 (ENSHGLG00000001849) #10	CALCOCO1 (ENSHGLG00000001954) #11	ENSHGLG00000043196 #12	ATF7 (ENSHGLG00000001620) #13	ENSHGLG00000048122 #14	ENSHGLG00000034619 #15	ENSHGLG00000045875 #15	MAP3K12 (ENSHGLG00000001148) #16	ENSHGLG00000001776 #17	SP1 (ENSHGLG00000001375) #20	SP7 (ENSHGLG00000000980) #21	AAAS (ENSHGLG00000002843) #22	ENSHGLG00000049848 #23	ENSHGLG00000039611	ENSHGLG00000044103	ENSHGLG00000049773	ENSHGLG00000032190	ENSHGLG00000002363 #24	ENSHGLG00000007558 #25	ENSHGLG00000019577 #26	ENSHGLG00000019365 #28	ITGB7 (ENSHGLG00000005533) #29	ZNF740 (ENSHGLG00000042228) #30	CSAD (ENSHGLG00000003514) #31	SOAT2 (ENSHGLG00000001722) #33	IGFBP6 (ENSHGLG00000003596) #34	SPRYD3 (ENSHGLG00000003437) #35
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m.s #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00390000011010.b.u.a
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m.s #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00390000011010.b.u.a
Arctic ground squirrel	MODERN SPECIES	202	HOXC11 (ENSUPAG00010020543) #8	HOXC12 (ENSUPAG00010020565) #9	HOXC13 (ENSUPAG00010020570) #10	CALCOCO1 (ENSUPAG00010020573) #11	ENSUPAG00010020616	ATF7 (ENSUPAG00010020626) #13	NPFF (ENSUPAG00010020645) #14	TARBP2 (ENSUPAG00010020659) #15	MAP3K12 (ENSUPAG00010020680) #16	ENSUPAG00010020704	ENSUPAG00010020714 #17	PRR13 (ENSUPAG00010020867) #18	AMHR2 (ENSUPAG00010020887) #19	SP1 (ENSUPAG00010020892) #20	SP7 (ENSUPAG00010020894) #21	AAAS (ENSUPAG00010020904) #22	MYG1 (ENSUPAG00010020913) #23	PFDN5 (ENSUPAG00010020941) #24	ESPL1 (ENSUPAG00010020953) #25	ENSUPAG00010020994 #26	ENSUPAG00010020996 #27	RARG (ENSUPAG00010021002) #28	ITGB7 (ENSUPAG00010021024) #29	ZNF740 (ENSUPAG00010021056) #30	CSAD (ENSUPAG00010021094) #31	SOAT2 (ENSUPAG00010021116) #33	IGFBP6 (ENSUPAG00010021123) #34	SPRYD3 (ENSUPAG00010021124) #35	TNS2 (ENSUPAG00010021130) #36	ENSUPAG00010021155	KRT18 (ENSUPAG00010021179)
Squirrel	MODERN SPECIES	112	HOXC10 (ENSSTOG00000012545) #7	HOXC11 (ENSSTOG00000028958) #8	HOXC12 (ENSSTOG00000019478) #9	CALCOCO1 (ENSSTOG00000007150) #11	ATP5MC2 (ENSSTOG00000008217)	ATF7 (ENSSTOG00000006788) #13	NPFF (ENSSTOG00000032315) #14	TARBP2 (ENSSTOG00000003678) #15	ENSSTOG00000025374	MAP3K12 (ENSSTOG00000023587) #16	ENSSTOG00000003635 #17	PRR13 (ENSSTOG00000003624) #18	AMHR2 (ENSSTOG00000003607) #19	SP1 (ENSSTOG00000005928) #20	SP7 (ENSSTOG00000025061) #21	AAAS (ENSSTOG00000004351) #22	MYG1 (ENSSTOG00000004332) #23	PFDN5 (ENSSTOG00000004313) #24	ESPL1 (ENSSTOG00000004238) #25	MFSD5 (ENSSTOG00000004229) #26	RARG (ENSSTOG00000021101) #28	ITGB7 (ENSSTOG00000011195) #29	ZNF740 (ENSSTOG00000011188) #30	CSAD (ENSSTOG00000011031) #31	SOAT2 (ENSSTOG00000011020) #33	IGFBP6 (ENSSTOG00000011018) #34	SPRYD3 (ENSSTOG00000006818) #35	TNS2 (ENSSTOG00000011007) #36	ENSSTOG00000006800	ENSSTOG00000021011	KRT18 (ENSSTOG00000015587)
Alpin marmot	MODERN SPECIES	34	HOXC11 (ENSMMMG00000003528) #8	HOXC12 (ENSMMMG00000003500) #9	ENSMMMG00000003492	CALCOCO1 (ENSMMMG00000003404) #11	ATP5MC2 (ENSMMMG00000003392)	ATF7 (ENSMMMG00000003376) #13	NPFF (ENSMMMG00000003352) #14	TARBP2 (ENSMMMG00000003329) #15	ENSMMMG00000003318	MAP3K12 (ENSMMMG00000003252) #16	ENSMMMG00000002876 #17	PRR13 (ENSMMMG00000002834) #18	AMHR2 (ENSMMMG00000002803) #19	SP1 (ENSMMMG00000002792) #20	SP7 (ENSMMMG00000002774) #21	AAAS (ENSMMMG00000002752) #22	PFDN5 (ENSMMMG00000002736) #24	MYG1 (ENSMMMG00000002670) #23	ESPL1 (ENSMMMG00000002554) #25	MFSD5 (ENSMMMG00000002535) #26	ENSMMMG00000002529 #27	RARG (ENSMMMG00000002491) #28	ITGB7 (ENSMMMG00000002454) #29	ZNF740 (ENSMMMG00000002367) #30	CSAD (ENSMMMG00000002317) #31	SOAT2 (ENSMMMG00000002301) #33	IGFBP6 (ENSMMMG00000002295) #34	SPRYD3 (ENSMMMG00000002277) #35	TNS2 (ENSMMMG00000002139) #36	ENSMMMG00000002074	ENSMMMG00000002067
Eurasian red squirrel	MODERN SPECIES	14	HOXC8 (ENSSVLG00005024998)	HOXC9 (ENSSVLG00005024979)	HOXC10 (ENSSVLG00005024954) #7	HOXC13 (ENSSVLG00005024880) #10	CALCOCO1 (ENSSVLG00005024843) #11	ENSSVLG00005024802	ATF7 (ENSSVLG00005024779) #13	NPFF (ENSSVLG00005024757) #14	TARBP2 (ENSSVLG00005024730) #15	MAP3K12 (ENSSVLG00005024636) #16	ENSSVLG00005024125 #17	PRR13 (ENSSVLG00005024006) #18	AMHR2 (ENSSVLG00005023965) #19	SP1 (ENSSVLG00005023931) #20	SP7 (ENSSVLG00005023903) #21	AAAS (ENSSVLG00005023795) #22	MYG1 (ENSSVLG00005023737) #23	PFDN5 (ENSSVLG00005023667) #24	ESPL1 (ENSSVLG00005023501) #25	MFSD5 (ENSSVLG00005023473) #26	ENSSVLG00005023458 #27	RARG (ENSSVLG00005023407) #28	ITGB7 (ENSSVLG00005023259) #29	ZNF740 (ENSSVLG00005023231) #30	CSAD (ENSSVLG00005023137) #31	SOAT2 (ENSSVLG00005023026) #33	ENSSVLG00005023005 #34	ENSSVLG00005022985 #34	SPRYD3 (ENSSVLG00005022945) #35	TNS2 (ENSSVLG00005022041) #36	ENSSVLG00005021941
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Kangaroo rat	MODERN SPECIES	474	Hoxc10 (ENSDORG00000006992) #7	Hoxc11 (ENSDORG00000006990) #8	Hoxc12 (ENSDORG00000026466) #9	Hoxc13 (ENSDORG00000023942) #10	Calcoco1 (ENSDORG00000002957) #11	Atp5g2 (ENSDORG00000002955)	Atf7 (ENSDORG00000001395) #13	Npff (ENSDORG00000027814) #14	Tarbp2 (ENSDORG00000001390) #15	Map3k12 (ENSDORG00000001389) #16	Pcbp2 (ENSDORG00000001384) #17	ENSDORG00000024095	Amhr2 (ENSDORG00000010718) #19	Sp1 (ENSDORG00000027635) #20	Sp7 (ENSDORG00000028171) #21	Aaas (ENSDORG00000015337) #22	Myg1 (ENSDORG00000015335) #23	Pfdn5 (ENSDORG00000015334) #24	Espl1 (ENSDORG00000015325) #25	Mfsd5 (ENSDORG00000012006) #26	Rarg (ENSDORG00000016232) #28	Itgb7 (ENSDORG00000002970) #29	Zfp740 (ENSDORG00000025338) #30	Csad (ENSDORG00000011344) #31	Soat2 (ENSDORG00000015049) #33	Igfbp6 (ENSDORG00000015048) #34	Spryd3 (ENSDORG00000015045) #35	Tns2 (ENSDORG00000015042) #36	ENSDORG00000004008	Krt18 (ENSDORG00000012109)	Krt8 (ENSDORG00000024873)
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.`b.b	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.`b.b	ENSGT00940000155261 #13	ENSGT00900000143176	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d.v
Golden Hamster	MODERN SPECIES	626	Hoxc8 (ENSMAUG00000016196)	Hoxc9 (ENSMAUG00000016070)	Hoxc10 (ENSMAUG00000015971) #7	Hoxc11 (ENSMAUG00000015214) #8	Hoxc12 (ENSMAUG00000015132) #9	Hoxc13 (ENSMAUG00000014990) #10	Calcoco1 (ENSMAUG00000013934) #11	ENSMAUG00000020460	Atf7 (ENSMAUG00000020350) #13	Tarbp2 (ENSMAUG00000019805) #15	Map3k12 (ENSMAUG00000019237) #16	ENSMAUG00000018893 #17	Prr13 (ENSMAUG00000018724)	Sp1 (ENSMAUG00000018418) #20	Sp7 (ENSMAUG00000010687) #21	Aaas (ENSMAUG00000017306) #22	Myg1 (ENSMAUG00000016541) #23	Pfdn5 (ENSMAUG00000016172) #24	Espl1 (ENSMAUG00000015882) #25	Mfsd5 (ENSMAUG00000020935) #26	Rarg (ENSMAUG00000020715) #28	Itgb7 (ENSMAUG00000020375) #29	Zfp740 (ENSMAUG00000017995) #30	Csad (ENSMAUG00000017154) #31	Soat2 (ENSMAUG00000016033) #33	Igfbp6 (ENSMAUG00000018051) #34	Spryd3 (ENSMAUG00000017127) #35	Tns2 (ENSMAUG00000015595) #36	Eif4b (ENSMAUG00000018343)	ENSMAUG00000017515	Krt8 (ENSMAUG00000016517)
Chinese hamster chok1gshd	MODERN SPECIES	1	Hoxc13 (ENSCGRG00001013867) #10	Calcoco1 (ENSCGRG00001014119) #11	ENSCGRG00001017197	Atf7 (ENSCGRG00001016192) #13	ENSCGRG00001015358	Npff (ENSCGRG00001012802) #14	TARBP2 (ENSCGRG00001011856) #15	Gm10337 (ENSCGRG00001010232)	Map3k12 (ENSCGRG00001012727) #16	ENSCGRG00001012894 #17	Prr13 (ENSCGRG00001016470)	Amhr2 (ENSCGRG00001012924) #19	ENSCGRG00001011981	Sp1 (ENSCGRG00001013852) #20	Sp7 (ENSCGRG00001012000) #21	Aaas (ENSCGRG00001012977) #22	Myg1 (ENSCGRG00001011384) #23	Pfdn5 (ENSCGRG00001016773) #24	Espl1 (ENSCGRG00001019762) #25	Mfsd5 (ENSCGRG00001009958) #26	Gm9918 (ENSCGRG00001009834) #27	Rarg (ENSCGRG00001012774) #28	Itgb7 (ENSCGRG00001013435) #29	Zfp740 (ENSCGRG00001010943) #30	Csad (ENSCGRG00001014017) #31	Soat2 (ENSCGRG00001017110) #33	Igfbp6 (ENSCGRG00001012017) #34	Spryd3 (ENSCGRG00001011326) #35	Tns2 (ENSCGRG00001013620) #36	Eif4b (ENSCGRG00001014070)	ENSCGRG00001013532
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.`b.b	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.e.b	ENSGT00940000153336.f	ENSGT00940000153309.d
Prairie vole	MODERN SPECIES	2	Hoxc10 (ENSMOCG00000009084) #7	Hoxc11 (ENSMOCG00000010091) #8	Hoxc12 (ENSMOCG00000016790) #9	Hoxc13 (ENSMOCG00000001084) #10	Calcoco1 (ENSMOCG00000010205) #11	Atp5g2 (ENSMOCG00000012641)	Atf7 (ENSMOCG00000014166) #13	Npff (ENSMOCG00000018084) #14	Tarbp2 (ENSMOCG00000003691) #15	Map3k12 (ENSMOCG00000015681) #16	ENSMOCG00000010409 #17	Prr13 (ENSMOCG00000014216)	Amhr2 (ENSMOCG00000015653) #19	Sp1 (ENSMOCG00000019761) #20	Sp7 (ENSMOCG00000004740) #21	Aaas (ENSMOCG00000010752) #22	Myg1 (ENSMOCG00000010593) #23	ENSMOCG00000016981 #24	Espl1 (ENSMOCG00000000327) #25	Mfsd5 (ENSMOCG00000015218) #26	Rarg (ENSMOCG00000017875) #28	Itgb7 (ENSMOCG00000015998) #29	Zfp740 (ENSMOCG00000008851) #30	Csad (ENSMOCG00000010697) #31	Soat2 (ENSMOCG00000019188) #33	Igfbp6 (ENSMOCG00000019916) #34	Spryd3 (ENSMOCG00000021720) #35	Tns2 (ENSMOCG00000018864) #36	ENSMOCG00000015277	ENSMOCG00000021743	ENSMOCG00000002864
Northern American deer mouse	MODERN SPECIES	12	Hoxc10 (ENSPEMG00000013609) #7	Hoxc11 (ENSPEMG00000011561) #8	Hoxc12 (ENSPEMG00000013217) #9	Hoxc13 (ENSPEMG00000005314) #10	Calcoco1 (ENSPEMG00000014813) #11	ENSPEMG00000017690	Atf7 (ENSPEMG00000016864) #13	Npff (ENSPEMG00000029282) #14	Tarbp2 (ENSPEMG00000014285) #15	Map3k12 (ENSPEMG00000000990) #16	ENSPEMG00000013236 #17	Prr13 (ENSPEMG00000017327)	Amhr2 (ENSPEMG00000004637) #19	Sp1 (ENSPEMG00000016000) #20	Sp7 (ENSPEMG00000006882) #21	Aaas (ENSPEMG00000009586) #22	Myg1 (ENSPEMG00000012414) #23	Pfdn5 (ENSPEMG00000004263) #24	Espl1 (ENSPEMG00000019219) #25	Mfsd5 (ENSPEMG00000013196) #26	Rarg (ENSPEMG00000014599) #28	Itgb7 (ENSPEMG00000016354) #29	Zfp740 (ENSPEMG00000026625) #30	Csad (ENSPEMG00000012689) #31	Soat2 (ENSPEMG00000015574) #33	Igfbp6 (ENSPEMG00000019192) #34	Spryd3 (ENSPEMG00000019117) #35	Tns2 (ENSPEMG00000002537) #36	ENSPEMG00000016399	Krt18 (ENSPEMG00000005282)	Krt8 (ENSPEMG00000014514)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535.b #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535.b #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261.e.a #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535.b #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261.e.a #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.u #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535.b #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
Mouse	MODERN SPECIES	6	Hoxc11 (ENSMUSG00000001656) #8	Hoxc12 (ENSMUSG00000050328) #9	Hoxc13 (ENSMUSG00000001655) #10	Calcoco1 (ENSMUSG00000023055) #11	Atp5g2 (ENSMUSG00000062683)	Atf7 (ENSMUSG00000099083) #13	Npff (ENSMUSG00000023052) #14	Tarbp2 (ENSMUSG00000023051) #15	Gm10337 (ENSMUSG00000071586)	Map3k12 (ENSMUSG00000023050) #16	Pcbp2 (ENSMUSG00000056851) #17	Prr13 (ENSMUSG00000023048)	Amhr2 (ENSMUSG00000023047) #19	Sp1 (ENSMUSG00000001280) #20	Sp7 (ENSMUSG00000060284) #21	Aaas (ENSMUSG00000036678) #22	Myg1 (ENSMUSG00000001285) #23	Pfdn5 (ENSMUSG00000001289) #24	Espl1 (ENSMUSG00000058290) #25	Mfsd5 (ENSMUSG00000045665) #26	Gm9918 (ENSMUSG00000097050) #27	Rarg (ENSMUSG00000001288) #28	Itgb7 (ENSMUSG00000001281) #29	Zfp740 (ENSMUSG00000046897) #30	Csad (ENSMUSG00000023044) #31	Soat2 (ENSMUSG00000023045) #33	Igfbp6 (ENSMUSG00000023046) #34	Spryd3 (ENSMUSG00000036966) #35	Tns2 (ENSMUSG00000037003) #36	Eif4b (ENSMUSG00000058655)	Krt18 (ENSMUSG00000023043)
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.y	ENSGT00940000155261.e.a #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00520000058554	ENSGT00940000154129.m #17	ENSGT00730000113467	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.u #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535.b #36	ENSGT00940000153336.e.b	ENSGT00940000153309.d
spretus	MODERN SPECIES	6	Hoxc12 (MGP_SPRETEiJ_G0021256) #9	Hoxc13 (MGP_SPRETEiJ_G0021255) #10	Calcoco1 (MGP_SPRETEiJ_G0021254) #11	MGP_SPRETEiJ_G0021253	MGP_SPRETEiJ_G0021252 #13	MGP_SPRETEiJ_G0021251 #13	Npff (MGP_SPRETEiJ_G0021250) #14	Tarbp2 (MGP_SPRETEiJ_G0021249) #15	Gm10337 (MGP_SPRETEiJ_G0021248)	Map3k12 (MGP_SPRETEiJ_G0021247) #16	Pcbp2 (MGP_SPRETEiJ_G0021246) #17	MGP_SPRETEiJ_G0021245	Amhr2 (MGP_SPRETEiJ_G0021244) #19	Sp1 (MGP_SPRETEiJ_G0021243) #20	Sp7 (MGP_SPRETEiJ_G0021242) #21	Aaas (MGP_SPRETEiJ_G0021241) #22	Myg1 (MGP_SPRETEiJ_G0021240) #23	Pfdn5 (MGP_SPRETEiJ_G0021239) #24	Espl1 (MGP_SPRETEiJ_G0021238) #25	Mfsd5 (MGP_SPRETEiJ_G0021237) #26	Rarg (MGP_SPRETEiJ_G0021236) #28	Itgb7 (MGP_SPRETEiJ_G0021235) #29	Zfp740 (MGP_SPRETEiJ_G0021234) #30	Csad (MGP_SPRETEiJ_G0021233) #31	Soat2 (MGP_SPRETEiJ_G0021232) #33	Igfbp6 (MGP_SPRETEiJ_G0021231) #34	Spryd3 (MGP_SPRETEiJ_G0021230) #35	Tns2 (MGP_SPRETEiJ_G0021229) #36	Eif4b (MGP_SPRETEiJ_G0021228)	Krt18 (MGP_SPRETEiJ_G0021227)	Krt8 (MGP_SPRETEiJ_G0021226)
Steppe mouse	MODERN SPECIES	2542				Atf7 (ENSMSIG00000025119) #13	ENSMSIG00000025180	Npff (ENSMSIG00000025187) #14	ENSMSIG00000025203 #15	Map3k12 (ENSMSIG00000025260) #16	Gm10337 (ENSMSIG00000025299)	ENSMSIG00000025304 #17	ENSMSIG00000025400	Amhr2 (ENSMSIG00000025424) #19	Sp1 (ENSMSIG00000025451) #20	ENSMSIG00000025505	Sp7 (ENSMSIG00000025533) #21	Aaas (ENSMSIG00000025551) #22	Myg1 (ENSMSIG00000025575) #23	Pfdn5 (ENSMSIG00000025610) #24	Espl1 (ENSMSIG00000025644) #25	Mfsd5 (ENSMSIG00000025738) #26	Gm9918 (ENSMSIG00000025744) #27	Rarg (ENSMSIG00000025751) #28	Itgb7 (ENSMSIG00000025781) #29	Zfp740 (ENSMSIG00000025809) #30	Csad (ENSMSIG00000025844) #31	Igfbp6 (ENSMSIG00000025891) #34	Spryd3 (ENSMSIG00000025900) #35	ENSMSIG00000025921 #36
Ryukyu mouse	MODERN SPECIES	6	Hoxc12 (MGP_CAROLIEiJ_G0020363) #9	Hoxc13 (MGP_CAROLIEiJ_G0020362) #10	Calcoco1 (MGP_CAROLIEiJ_G0020361) #11	Atp5g2 (MGP_CAROLIEiJ_G0020360)	MGP_CAROLIEiJ_G0020359 #13	MGP_CAROLIEiJ_G0020358 #13	Npff (MGP_CAROLIEiJ_G0020357) #14	Tarbp2 (MGP_CAROLIEiJ_G0020356) #15	Gm10337 (MGP_CAROLIEiJ_G0020355)	MGP_CAROLIEiJ_G0020354	Pcbp2 (MGP_CAROLIEiJ_G0020353) #17	Prr13 (MGP_CAROLIEiJ_G0020352)	Amhr2 (MGP_CAROLIEiJ_G0020351) #19	MGP_CAROLIEiJ_G0020350 #20	Sp7 (MGP_CAROLIEiJ_G0020349) #21	Aaas (MGP_CAROLIEiJ_G0020348) #22	Myg1 (MGP_CAROLIEiJ_G0020347) #23	Pfdn5 (MGP_CAROLIEiJ_G0020346) #24	Espl1 (MGP_CAROLIEiJ_G0020345) #25	Mfsd5 (MGP_CAROLIEiJ_G0020344) #26	Rarg (MGP_CAROLIEiJ_G0020343) #28	Itgb7 (MGP_CAROLIEiJ_G0020342) #29	Zfp740 (MGP_CAROLIEiJ_G0020341) #30	Csad (MGP_CAROLIEiJ_G0020340) #31	Soat2 (MGP_CAROLIEiJ_G0020339) #33	Igfbp6 (MGP_CAROLIEiJ_G0020338) #34	Spryd3 (MGP_CAROLIEiJ_G0020337) #35	Tns2 (MGP_CAROLIEiJ_G0020336) #36	Eif4b (MGP_CAROLIEiJ_G0020335)	Krt18 (MGP_CAROLIEiJ_G0020334)	Krt8 (MGP_CAROLIEiJ_G0020333)
Shrew mouse	MODERN SPECIES	8	Hoxc12 (MGP_PahariEiJ_G0020362) #9	Hoxc13 (MGP_PahariEiJ_G0020361) #10	Calcoco1 (MGP_PahariEiJ_G0020360) #11	Atp5g2 (MGP_PahariEiJ_G0020359)	MGP_PahariEiJ_G0020358 #13	MGP_PahariEiJ_G0020357 #13	Npff (MGP_PahariEiJ_G0020356) #14	Tarbp2 (MGP_PahariEiJ_G0020355) #15	Gm10337 (MGP_PahariEiJ_G0020354)	Map3k12 (MGP_PahariEiJ_G0020353) #16	MGP_PahariEiJ_G0020352 #17	Prr13 (MGP_PahariEiJ_G0020351)	Amhr2 (MGP_PahariEiJ_G0020350) #19	Sp1 (MGP_PahariEiJ_G0020349) #20	Sp7 (MGP_PahariEiJ_G0020348) #21	Aaas (MGP_PahariEiJ_G0020347) #22	Myg1 (MGP_PahariEiJ_G0020346) #23	Pfdn5 (MGP_PahariEiJ_G0020345) #24	Espl1 (MGP_PahariEiJ_G0020344) #25	Mfsd5 (MGP_PahariEiJ_G0020343) #26	Rarg (MGP_PahariEiJ_G0020342) #28	Itgb7 (MGP_PahariEiJ_G0020341) #29	Zfp740 (MGP_PahariEiJ_G0020340) #30	Csad (MGP_PahariEiJ_G0020339) #31	MGP_PahariEiJ_G0020338 #33	Igfbp6 (MGP_PahariEiJ_G0020337) #34	Spryd3 (MGP_PahariEiJ_G0020336) #35	Tns2 (MGP_PahariEiJ_G0020335) #36	MGP_PahariEiJ_G0020334	Krt18 (MGP_PahariEiJ_G0020333)	Krt8 (MGP_PahariEiJ_G0020332)
Rat	MODERN SPECIES	17	Hoxc11 (ENSRNOG00000016141) #8	Hoxc12 (ENSRNOG00000016116) #9	Hoxc13 (ENSRNOG00000028679) #10	AABR07058934.1 (ENSRNOG00000016100)	Calcoco1 (ENSRNOG00000015447) #11	Atp5mc2 (ENSRNOG00000015320)	Atf7 (ENSRNOG00000015269) #13	Tarbp2 (ENSRNOG00000042355) #15	Gm10337 (ENSRNOG00000063518)	Map3k12 (ENSRNOG00000015134) #16	Pcbp2 (ENSRNOG00000036852) #17	Prr13 (ENSRNOG00000042094)	Amhr2 (ENSRNOG00000014850) #19	Sp1 (ENSRNOG00000014084) #20	Sp7 (ENSRNOG00000014082) #21	Aaas (ENSRNOG00000013445) #22	Myg1 (ENSRNOG00000013343) #23	Pfdn5 (ENSRNOG00000012985) #24	Espl1 (ENSRNOG00000012835) #25	Mfsd5 (ENSRNOG00000012832) #26	Gm9918 (ENSRNOG00000062295) #27	Rarg (ENSRNOG00000012499) #28	Itgb7 (ENSRNOG00000012208) #29	Znf740 (ENSRNOG00000012192) #30	Csad (ENSRNOG00000011573) #31	Soat2 (ENSRNOG00000053769) #33	Igfbp6 (ENSRNOG00000010977) #34	Spryd3 (ENSRNOG00000010793) #35	Tns2 (ENSRNOG00000010588) #36	Krt18 (ENSRNOG00000047393)	Krt8 (ENSRNOG00000009779)
Upper Galilee mountains blind mole rat	MODERN SPECIES	441	Hoxc11 (ENSNGAG00000022627) #8	Hoxc12 (ENSNGAG00000022515) #9	Hoxc13 (ENSNGAG00000022328) #10	Calcoco1 (ENSNGAG00000022012) #11	ENSNGAG00000020790	Atf7 (ENSNGAG00000018161) #13	ENSNGAG00000016268	Npff (ENSNGAG00000019691) #14	ENSNGAG00000017769 #15	Map3k12 (ENSNGAG00000017001) #16	Pcbp2 (ENSNGAG00000012054) #17	Prr13 (ENSNGAG00000007574)	Amhr2 (ENSNGAG00000004072) #19	Sp1 (ENSNGAG00000021540) #20	Sp7 (ENSNGAG00000023698) #21	Aaas (ENSNGAG00000017125) #22	Myg1 (ENSNGAG00000014076) #23	Pfdn5 (ENSNGAG00000000684) #24	Espl1 (ENSNGAG00000012909) #25	ENSNGAG00000006649	Mfsd5 (ENSNGAG00000020403) #26	Rarg (ENSNGAG00000003866) #28	Itgb7 (ENSNGAG00000017710) #29	Zfp740 (ENSNGAG00000014852) #30	Csad (ENSNGAG00000012528) #31	Soat2 (ENSNGAG00000015773) #33	Igfbp6 (ENSNGAG00000015002) #34	Spryd3 (ENSNGAG00000012021) #35	Tns2 (ENSNGAG00000003782) #36	Eif4b (ENSNGAG00000012353)	ENSNGAG00000010448
Lesser Egyptian jerboa	MODERN SPECIES	42	Hoxc12 (ENSJJAG00000024305) #9	Hoxc13 (ENSJJAG00000023584) #10	Calcoco1 (ENSJJAG00000011789) #11	Atp5g2 (ENSJJAG00000009417)	Atf7 (ENSJJAG00000014294) #13	ENSJJAG00000012378	Npff (ENSJJAG00000010307) #14	ENSJJAG00000007198 #15	Gm10337 (ENSJJAG00000003834)	Map3k12 (ENSJJAG00000007805) #16	ENSJJAG00000019739 #17	ENSJJAG00000011729 #18	Amhr2 (ENSJJAG00000001950) #19	Sp1 (ENSJJAG00000013725) #20	Sp7 (ENSJJAG00000016003) #21	Aaas (ENSJJAG00000017804) #22	ENSJJAG00000017792 #24	Myg1 (ENSJJAG00000012427) #23	Espl1 (ENSJJAG00000020338) #25	Mfsd5 (ENSJJAG00000019216) #26	Rarg (ENSJJAG00000019786) #28	Itgb7 (ENSJJAG00000016744) #29	ENSJJAG00000023791 #30	Csad (ENSJJAG00000002414) #31	Soat2 (ENSJJAG00000023343) #33	Igfbp6 (ENSJJAG00000013008) #34	Spryd3 (ENSJJAG00000021510) #35	Tns2 (ENSJJAG00000010755) #36	Eif4b (ENSJJAG00000021178)	Krt18 (ENSJJAG00000003448)	Krt8 (ENSJJAG00000016043)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Eulipotyphla	ANCESTRAL SPECIES	414																ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24
Common shrew	MODERN SPECIES	1694																ENSSARG00000006254 #22	MYG1 (ENSSARG00000006241) #23	PFDN5 (ENSSARG00000006221) #24
Hedgehog	MODERN SPECIES	2318																AAAS (ENSEEUG00000013994) #22	MYG1 (ENSEEUG00000013949) #23	ENSEEUG00000013930 #24
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Suina	ANCESTRAL SPECIES	21	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d	ENSGT01010000229947
Chacoan peccary	MODERN SPECIES	900	HOXC10 (ENSCWAG00000014844) #7	HOXC11 (ENSCWAG00000014873) #8	HOXC12 (ENSCWAG00000014902) #9	HOXC13 (ENSCWAG00000014937) #10	CALCOCO1 (ENSCWAG00000014985) #11	ENSCWAG00000015074 #12	ATF7 (ENSCWAG00000015117) #13	NPFF (ENSCWAG00000015156) #14	TARBP2 (ENSCWAG00000015198) #15	MAP3K12 (ENSCWAG00000015294) #16	PCBP2 (ENSCWAG00000015488) #17	PRR13 (ENSCWAG00000015767) #18	AMHR2 (ENSCWAG00000015809) #19	SP1 (ENSCWAG00000016036) #20	SP7 (ENSCWAG00000016057) #21	AAAS (ENSCWAG00000016123) #22	MYG1 (ENSCWAG00000016458) #23	PFDN5 (ENSCWAG00000016508) #24	ESPL1 (ENSCWAG00000016610) #25	MFSD5 (ENSCWAG00000016820) #26
Pig	MODERN SPECIES	13	HOXC11 (ENSSSCG00000028104) #8	HOXC12 (ENSSSCG00000000281) #9	HOXC13 (ENSSSCG00000000279) #10	CALCOCO1 (ENSSSCG00000028481) #11	ATP5MC2 (ENSSSCG00000062561)	ATF7 (ENSSSCG00000000278) #13	NPFF (ENSSSCG00000000277) #14	TARBP2 (ENSSSCG00000000276) #15	MAP3K12 (ENSSSCG00000000275) #16	PCBP2 (ENSSSCG00000000274) #17	PRR13 (ENSSSCG00000000273) #18	AMHR2 (ENSSSCG00000000271) #19	ENSSSCG00000049546	SP1 (ENSSSCG00000000272) #20	SP7 (ENSSSCG00000062878) #21	AAAS (ENSSSCG00000000268) #22	MYG1 (ENSSSCG00000046295) #23	PFDN5 (ENSSSCG00000000267) #24	ESPL1 (ENSSSCG00000000265) #25	MFSD5 (ENSSSCG00000000264) #26	RARG (ENSSSCG00000000258) #28	ITGB7 (ENSSSCG00000000257) #29	ZNF740 (ENSSSCG00000036564) #30	CSAD (ENSSSCG00000000259) #31	SOAT2 (ENSSSCG00000000260) #33	IGFBP6 (ENSSSCG00000000261) #34	SPRYD3 (ENSSSCG00000000262) #35	TNS2 (ENSSSCG00000000263) #36	EIF4B (ENSSSCG00000032028)	KRT18 (ENSSSCG00000000253)	ENSSSCG00000051741
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000155255.r	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.c	ENSGT00940000155001.B.h.b.b	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000155255.r	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.n	ENSGT00940000153309.d.f
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000157455.c	ENSGT00940000155261 #13	ENSGT00940000155001.B.h.b.b	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00390000007772.db.c.b	ENSGT00390000007772.db.c.a	ENSGT00390000007772.db.d	ENSGT00940000155255.r	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.n	ENSGT00940000153309.d.f
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.c	ENSGT00940000155261 #13	ENSGT00940000155001.B.h.b.b	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.n	ENSGT00940000153309.d.f
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.c	ENSGT00940000155261 #13	ENSGT00940000155001.B.h.b.b	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.n	ENSGT00550000074912.g.a
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455.c	ENSGT00940000155261 #13	ENSGT00940000155001.B.h.b.b	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.n	ENSGT00550000074912.g.a	ENSGT00940000153309.d.f
Narwhal	MODERN SPECIES	313	HOXC11 (ENSMMNG00015015840) #8	HOXC12 (ENSMMNG00015015809) #9	HOXC13 (ENSMMNG00015015786) #10	CALCOCO1 (ENSMMNG00015015727) #11	ENSMMNG00015015701	ENSMMNG00015017394	ATF7 (ENSMMNG00015017347) #13	NPFF (ENSMMNG00015017292) #14	TARBP2 (ENSMMNG00015017195) #15	MAP3K12 (ENSMMNG00015017081) #16	PCBP2 (ENSMMNG00015016994) #17	PRR13 (ENSMMNG00015016930) #18	AMHR2 (ENSMMNG00015016804) #19	SP1 (ENSMMNG00015016728) #20	SP7 (ENSMMNG00015016703) #21	AAAS (ENSMMNG00015016590) #22	MYG1 (ENSMMNG00015016491) #23	PFDN5 (ENSMMNG00015016405) #24	ESPL1 (ENSMMNG00015016245) #25	MFSD5 (ENSMMNG00015016198) #26	RARG (ENSMMNG00015016062) #28	ITGB7 (ENSMMNG00015015947) #29	ZNF740 (ENSMMNG00015015890) #30	CSAD (ENSMMNG00015015824) #31	SOAT2 (ENSMMNG00015015735) #33	IGFBP6 (ENSMMNG00015015708) #34	SPRYD3 (ENSMMNG00015015677) #35	TNS2 (ENSMMNG00015015588) #36	EIF4B (ENSMMNG00015015515)	ENSMMNG00015015486	ENSMMNG00015015476
Beluga whale	MODERN SPECIES	39	HOXC9 (ENSDLEG00000006790)	HOXC10 (ENSDLEG00000006797) #7	HOXC11 (ENSDLEG00000003644) #8	HOXC12 (ENSDLEG00000003651) #9	HOXC13 (ENSDLEG00000003655) #10	CALCOCO1 (ENSDLEG00000003663) #11	ATF7 (ENSDLEG00000003680) #13	ENSDLEG00000003693	NPFF (ENSDLEG00000003697) #14	TARBP2 (ENSDLEG00000003709) #15	MAP3K12 (ENSDLEG00000003715) #16	PRR13 (ENSDLEG00000003739) #17	AMHR2 (ENSDLEG00000003786) #19	SP1 (ENSDLEG00000003794) #20	SP7 (ENSDLEG00000003806) #21	AAAS (ENSDLEG00000003810) #22	CUNH12orf10 (ENSDLEG00000003824) #23	PFDN5 (ENSDLEG00000003832) #24	ESPL1 (ENSDLEG00000003868) #25	MFSD5 (ENSDLEG00000004023) #26	RARG (ENSDLEG00000004025) #28	ITGB7 (ENSDLEG00000004036) #29	ZNF740 (ENSDLEG00000004043) #30	CSAD (ENSDLEG00000004054) #31	SOAT2 (ENSDLEG00000004069) #33	IGFBP6 (ENSDLEG00000004084) #34	SPRYD3 (ENSDLEG00000004093) #35	TNS2 (ENSDLEG00000004106) #36	EIF4B (ENSDLEG00000004139)	ENSDLEG00000004153	KRT18 (ENSDLEG00000004159)
Vaquita	MODERN SPECIES	1	HOXC11 (ENSPSNG00000015803) #8	HOXC12 (ENSPSNG00000015844) #9	HOXC13 (ENSPSNG00000015899) #10	CALCOCO1 (ENSPSNG00000004212) #11	ENSPSNG00000004253	ATF7 (ENSPSNG00000004293) #13	ENSPSNG00000004322	NPFF (ENSPSNG00000004338) #14	TARBP2 (ENSPSNG00000004360) #15	MAP3K12 (ENSPSNG00000004421) #16	PCBP2 (ENSPSNG00000004524) #17	PRR13 (ENSPSNG00000004650) #18	AMHR2 (ENSPSNG00000004719) #19	SP1 (ENSPSNG00000004798) #20	SP7 (ENSPSNG00000004847) #21	AAAS (ENSPSNG00000004913) #22	MYG1 (ENSPSNG00000004998) #23	PFDN5 (ENSPSNG00000005161) #24	ESPL1 (ENSPSNG00000005038) #25	MFSD5 (ENSPSNG00000005186) #26	ENSPSNG00000005203 #27	RARG (ENSPSNG00000005237) #28	ITGB7 (ENSPSNG00000005404) #29	ZNF740 (ENSPSNG00000005501) #30	CSAD (ENSPSNG00000005543) #31	SOAT2 (ENSPSNG00000005621) #33	IGFBP6 (ENSPSNG00000005671) #34	SPRYD3 (ENSPSNG00000005703) #35	TNS2 (ENSPSNG00000005790) #36	EIF4B (ENSPSNG00000006000)	ENSPSNG00000006052
Dolphin	MODERN SPECIES	878															SP7 (ENSTTRG00000002784) #21	AAAS (ENSTTRG00000002783) #22	MYG1 (ENSTTRG00000002782) #23	PFDN5 (ENSTTRG00000002781) #24	ESPL1 (ENSTTRG00000002780) #25	RARG (ENSTTRG00000002778) #28	ITGB7 (ENSTTRG00000002777) #29	ZNF740 (ENSTTRG00000002776) #30	CSAD (ENSTTRG00000002775) #31	SOAT2 (ENSTTRG00000002774) #33	IGFBP6 (ENSTTRG00000002773) #34	SPRYD3 (ENSTTRG00000002772) #35	TNS2 (ENSTTRG00000002771) #36	EIF4B (ENSTTRG00000002770)
Sperm whale	MODERN SPECIES	17	HOXC12 (ENSPCTG00005008558) #9	HOXC13 (ENSPCTG00005008577) #10	ENSPCTG00005008605	ATP5MC2 (ENSPCTG00005008660)	ATF7 (ENSPCTG00005008736) #13	ENSPCTG00005008838	NPFF (ENSPCTG00005008851) #14	TARBP2 (ENSPCTG00005008878) #15	PCBP2 (ENSPCTG00005009053) #17	PRR13 (ENSPCTG00005009366) #18	ENSPCTG00005009457	AMHR2 (ENSPCTG00005009529) #19	SP1 (ENSPCTG00005009868) #20	ENSPCTG00005009901	SP7 (ENSPCTG00005009940) #21	AAAS (ENSPCTG00005010087) #22	C6H12orf10 (ENSPCTG00005010244) #23	PFDN5 (ENSPCTG00005010402) #24	ENSPCTG00005010522 #27	RARG (ENSPCTG00005010616) #28	ITGB7 (ENSPCTG00005010788) #29	ZNF740 (ENSPCTG00005011077) #30	CSAD (ENSPCTG00005011166) #31	SOAT2 (ENSPCTG00005011541) #33	IGFBP6 (ENSPCTG00005011716) #34	SPRYD3 (ENSPCTG00005011783) #35	TNS2 (ENSPCTG00005011947) #36	EIF4B (ENSPCTG00005013255)	ENSPCTG00005013898	ENSPCTG00005013944	ENSPCTG00005014251
Blue whale	MODERN SPECIES	1	ENSBMSG00010008971	CALCOCO1 (ENSBMSG00010008941) #11	ENSBMSG00010008905	ENSBMSG00010008895	ATF7 (ENSBMSG00010008868) #13	NPFF (ENSBMSG00010008841) #14	TARBP2 (ENSBMSG00010008807) #15	MAP3K12 (ENSBMSG00010008766) #16	PCBP2 (ENSBMSG00010008701) #17	PRR13 (ENSBMSG00010008673) #18	ENSBMSG00010008662	AMHR2 (ENSBMSG00010008612) #19	ENSBMSG00010008588	SP1 (ENSBMSG00010008563) #20	SP7 (ENSBMSG00010008549) #21	AAAS (ENSBMSG00010008504) #22	MYG1 (ENSBMSG00010008409) #23	PFDN5 (ENSBMSG00010008361) #24	ESPL1 (ENSBMSG00010008313) #25	MFSD5 (ENSBMSG00010008292) #26	RARG (ENSBMSG00010008243) #28	ITGB7 (ENSBMSG00010008198) #29	ZNF740 (ENSBMSG00010008171) #30	CSAD (ENSBMSG00010008143) #31	SOAT2 (ENSBMSG00010008108) #33	IGFBP6 (ENSBMSG00010008088) #34	SPRYD3 (ENSBMSG00010008059) #35	TNS2 (ENSBMSG00010007646) #36	EIF4B (ENSBMSG00010007537)	KRT18 (ENSBMSG00010007501)	ENSBMSG00010007486
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000161087 #10	ENSGT00940000154517.hb	ENSGT00940000154940	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000155255.r	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Yarkand deer	MODERN SPECIES	22	HOXC11 (ENSCHYG00000002704) #8	HOXC12 (ENSCHYG00000002710) #9	HOXC13 (ENSCHYG00000002721) #10	ENSCHYG00000002730	ENSCHYG00000002740	CALCOCO1 (ENSCHYG00000002756) #11	ENSCHYG00000002802 #12	ATF7 (ENSCHYG00000002814) #13	NPFF (ENSCHYG00000002830) #14	TARBP2 (ENSCHYG00000002847) #15	MAP3K12 (ENSCHYG00000002884) #16	ENSCHYG00000002986 #17	AMHR2 (ENSCHYG00000003480) #19	SP1 (ENSCHYG00000003580) #20	SP7 (ENSCHYG00000003603) #21	AAAS (ENSCHYG00000003635) #22	ENSCHYG00000003725 #24	MYG1 (ENSCHYG00000003771) #23	ESPL1 (ENSCHYG00000003808) #25	MFSD5 (ENSCHYG00000003855) #26	ENSCHYG00000003863 #27	RARG (ENSCHYG00000000032) #28	ITGB7 (ENSCHYG00000000052) #29	ZNF740 (ENSCHYG00000000069) #30	CSAD (ENSCHYG00000000099) #31	SOAT2 (ENSCHYG00000000132) #33	IGFBP6 (ENSCHYG00000000153) #34	SPRYD3 (ENSCHYG00000000180) #35	TNS2 (ENSCHYG00000000253) #36	ENSCHYG00000000573	ENSCHYG00000000689
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000154517.hb	ENSGT00940000154940	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000155255.r	ENSGT00730000111608.a #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000154517.hb	ENSGT00940000154940	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000155255.r	ENSGT00730000111608.a #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Bovinae	ANCESTRAL SPECIES	17	ENSGT00940000161087 #10	ENSGT00940000154517.hb	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000155255.r	ENSGT00730000111608.a #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Bos	ANCESTRAL SPECIES	2	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154517.hb	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000161087 #10	ENSGT00940000154517.hb	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000155255.r	ENSGT00730000111608.a #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Hybrid Bos Indicus	MODERN SPECIES	24	HOXC11 (ENSBIXG00005013716) #8	HOXC12 (ENSBIXG00005013757) #9	HOXC13 (ENSBIXG00005001711) #10	ENSBIXG00005013795	CALCOCO1 (ENSBIXG00005005927) #11	ENSBIXG00005014027 #12	ATF7 (ENSBIXG00005014058) #13	NPFF (ENSBIXG00005014073) #14	TARBP2 (ENSBIXG00005014116) #15	MAP3K12 (ENSBIXG00005006369) #16	PCBP2 (ENSBIXG00005014274) #17	ENSBIXG00005007121 #18	ENSBIXG00005014381	SP1 (ENSBIXG00005014609) #20	SP7 (ENSBIXG00005014666) #21	AAAS (ENSBIXG00005002129) #22	MYG1 (ENSBIXG00005002148) #23	PFDN5 (ENSBIXG00005014918) #24	ESPL1 (ENSBIXG00005002191) #25	MFSD5 (ENSBIXG00005014976) #26	ENSBIXG00005014989 #27	RARG (ENSBIXG00005015040) #28	ITGB7 (ENSBIXG00005015140) #29	CSAD (ENSBIXG00005002243) #31	SOAT2 (ENSBIXG00005006560) #33	IGFBP6 (ENSBIXG00005006436) #34	SPRYD3 (ENSBIXG00005015414) #35	TNS2 (ENSBIXG00005015711) #36	EIF4B (ENSBIXG00005000161)	ENSBIXG00005015865	KRT18 (ENSBIXG00005015883)
Cow	MODERN SPECIES	24	HOXC11 (ENSBTAG00000006879) #8	HOXC12 (ENSBTAG00000000924) #9	HOXC13 (ENSBTAG00000000923) #10	ENSBTAG00000052958	CALCOCO1 (ENSBTAG00000015016) #11	ATP5MC2 (ENSBTAG00000005735) #12	ATF7 (ENSBTAG00000005863) #13	NPFF (ENSBTAG00000002401) #14	TARBP2 (ENSBTAG00000000435) #15	MAP3K12 (ENSBTAG00000020758) #16	PCBP2 (ENSBTAG00000020757) #17	PRR13 (ENSBTAG00000026916) #18	AMHR2 (ENSBTAG00000018524) #19	SP1 (ENSBTAG00000003021) #20	SP7 (ENSBTAG00000033292) #21	AAAS (ENSBTAG00000020179) #22	MYG1 (ENSBTAG00000020177) #23	PFDN5 (ENSBTAG00000008935) #24	ESPL1 (ENSBTAG00000008934) #25	MFSD5 (ENSBTAG00000008933) #26	RARG (ENSBTAG00000007592) #28	ITGB7 (ENSBTAG00000018993) #29	ZNF740 (ENSBTAG00000046481) #30	CSAD (ENSBTAG00000007829) #31	SOAT2 (ENSBTAG00000005623) #33	IGFBP6 (ENSBTAG00000021467) #34	SPRYD3 (ENSBTAG00000021464) #35	TNS2 (ENSBTAG00000006904) #36	EIF4B (ENSBTAG00000006883)	KRT18 (ENSBTAG00000001517)	KRT8 (ENSBTAG00000000836)
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154517.hb	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.a.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Wild yak	MODERN SPECIES	1370					CALCOCO1 (ENSBMUG00000021277) #11	ENSBMUG00000021320 #12	ATF7 (ENSBMUG00000021354) #13	NPFF (ENSBMUG00000021363) #14	TARBP2 (ENSBMUG00000021375) #15	MAP3K12 (ENSBMUG00000021413) #16	PCBP2 (ENSBMUG00000021744) #17	ENSBMUG00000022042 #18	AMHR2 (ENSBMUG00000022128) #19	SP1 (ENSBMUG00000022146) #20	SP7 (ENSBMUG00000022156) #21	AAAS (ENSBMUG00000022211) #22	MYG1 (ENSBMUG00000022239) #23	PFDN5 (ENSBMUG00000022264) #24	ESPL1 (ENSBMUG00000022293) #25	MFSD5 (ENSBMUG00000022313) #26	ENSBMUG00000022324 #27	RARG (ENSBMUG00000022368) #28	ITGB7 (ENSBMUG00000022408) #29	ENSBMUG00000022424 #30	CSAD (ENSBMUG00000022478) #31	SOAT2 (ENSBMUG00000022561) #33	ENSBMUG00000022571 #34	SPRYD3 (ENSBMUG00000022579) #35	TNS2 (ENSBMUG00000022663) #36	EIF4B (ENSBMUG00000022718)	KRT18 (ENSBMUG00000022735)
Domestic yak	MODERN SPECIES	24	HOXC10 (ENSBGRG00000003864) #7	HOXC9 (ENSBGRG00000003819)	HOXC12 (ENSBGRG00000003794) #9	HOXC13 (ENSBGRG00000003766) #10	ENSBGRG00000003755	CALCOCO1 (ENSBGRG00000003673) #11	ENSBGRG00000003615	ATF7 (ENSBGRG00000003588) #13	NPFF (ENSBGRG00000003578) #14	TARBP2 (ENSBGRG00000003551) #15	MAP3K12 (ENSBGRG00000003502) #16	PCBP2 (ENSBGRG00000003386) #17	ENSBGRG00000003334 #18	SP1 (ENSBGRG00000003298) #20	SP7 (ENSBGRG00000003281) #21	AAAS (ENSBGRG00000003057) #22	MYG1 (ENSBGRG00000002968) #23	PFDN5 (ENSBGRG00000002918) #24	ESPL1 (ENSBGRG00000002871) #25	MFSD5 (ENSBGRG00000002864) #26	ENSBGRG00000002856 #27	RARG (ENSBGRG00000002743) #28	ITGB7 (ENSBGRG00000002637) #29	ENSBGRG00000002603 #30	CSAD (ENSBGRG00000002515) #31	SOAT2 (ENSBGRG00000002467) #33	IGFBP6 (ENSBGRG00000002440) #34	SPRYD3 (ENSBGRG00000002401) #35	TNS2 (ENSBGRG00000001825) #36	EIF4B (ENSBGRG00000001634)	KRT18 (ENSBGRG00000001564)
American bison	MODERN SPECIES	3297	HOXC12 (ENSBBBG00000004755) #9	HOXC13 (ENSBBBG00000004761) #10	ENSBBBG00000018889	CALCOCO1 (ENSBBBG00000004810) #11	ENSBBBG00000004822 #12	ATF7 (ENSBBBG00000018999) #13	NPFF (ENSBBBG00000019006) #14	TARBP2 (ENSBBBG00000019042) #15	MAP3K12 (ENSBBBG00000019107) #16	PCBP2 (ENSBBBG00000019391) #17	ENSBBBG00000007514 #18	ENSBBBG00000005204	AMHR2 (ENSBBBG00000019512) #19	SP1 (ENSBBBG00000019533) #20	SP7 (ENSBBBG00000005289) #21	AAAS (ENSBBBG00000019621) #22	MYG1 (ENSBBBG00000005178) #23	PFDN5 (ENSBBBG00000019688) #24	ESPL1 (ENSBBBG00000019754) #25	MFSD5 (ENSBBBG00000006967) #26	ENSBBBG00000019765 #27	RARG (ENSBBBG00000019817) #28	ITGB7 (ENSBBBG00000019882) #29	ZNF740 (ENSBBBG00000019895) #30	CSAD (ENSBBBG00000008174) #31	SOAT2 (ENSBBBG00000019978) #33	IGFBP6 (ENSBBBG00000005403) #34	SPRYD3 (ENSBBBG00000020007) #35	TNS2 (ENSBBBG00000020200) #36	EIF4B (ENSBBBG00000020243)	KRT18 (ENSBBBG00000020257)
Caprinae	ANCESTRAL SPECIES		ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.cb.b.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608.b.b #18	ENSGT00730000111608.a.a #18	ENSGT00940000155255.r	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609.h.b #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Goat	MODERN SPECIES	24	HOXC13 (ENSCHIG00000025201) #10	ENSCHIG00000009554	ENSCHIG00000022160	CALCOCO1 (ENSCHIG00000016780) #11	ENSCHIG00000010354 #12	ATF7 (ENSCHIG00000025884) #13	NPFF (ENSCHIG00000020253) #14	TARBP2 (ENSCHIG00000026017) #15	MAP3K12 (ENSCHIG00000008756) #16	PCBP2 (ENSCHIG00000019895) #17	ENSCHIG00000004451 #18	ENSCHIG00000025106	AMHR2 (ENSCHIG00000007964) #19	SP1 (ENSCHIG00000012718) #20	SP7 (ENSCHIG00000026953) #21	AAAS (ENSCHIG00000019501) #22	MYG1 (ENSCHIG00000026582) #23	ENSCHIG00000020918 #24	ESPL1 (ENSCHIG00000015195) #25	RARG (ENSCHIG00000023543) #28	ITGB7 (ENSCHIG00000015178) #29	ZNF740 (ENSCHIG00000008608) #30	CSAD (ENSCHIG00000026280) #31	SOAT2 (ENSCHIG00000025165) #33	IGFBP6 (ENSCHIG00000019464) #34	SPRYD3 (ENSCHIG00000013548) #35	TNS2 (ENSCHIG00000005570) #36	ENSCHIG00000012380	ENSCHIG00000023628	KRT8 (ENSCHIG00000018745)	KRT78 (ENSCHIG00000026015)
Rambouillet Sheep	MODERN SPECIES	19	HOXC10 (ENSOARG00020018091) #7	HOXC11 (ENSOARG00020018118) #8	HOXC12 (ENSOARG00020018162) #9	HOXC13 (ENSOARG00020018195) #10	CALCOCO1 (ENSOARG00020018277) #11	ATP5MC2 (ENSOARG00020018507) #12	ATF7 (ENSOARG00020018598) #13	NPFF (ENSOARG00020018800) #14	TARBP2 (ENSOARG00020018838) #15	MAP3K12 (ENSOARG00020019014) #16	PCBP2 (ENSOARG00020019417) #17	PRR13 (ENSOARG00020019703) #18	AMHR2 (ENSOARG00020019831) #19	SP1 (ENSOARG00020006599) #20	SP7 (ENSOARG00020006625) #21	AAAS (ENSOARG00020006677) #22	MYG1 (ENSOARG00020006926) #23	PFDN5 (ENSOARG00020007019) #24	ESPL1 (ENSOARG00020007157) #25	MFSD5 (ENSOARG00020007322) #26	ENSOARG00020007350 #27	RARG (ENSOARG00020007395) #28	ITGB7 (ENSOARG00020007654) #29	ZNF740 (ENSOARG00020007786) #30	ENSOARG00020007822 #31	SOAT2 (ENSOARG00020008053) #33	IGFBP6 (ENSOARG00020008241) #34	SPRYD3 (ENSOARG00020008291) #35	TNS2 (ENSOARG00020008391) #36	EIF4B (ENSOARG00020009127)	KRT18 (ENSOARG00020009288)
Siberian musk deer	MODERN SPECIES	320	HOXC12 (ENSMMSG00000007203) #9	HOXC13 (ENSMMSG00000007187) #10	ENSMMSG00000007150	CALCOCO1 (ENSMMSG00000007007) #11	ENSMMSG00000006941 #12	ATF7 (ENSMMSG00000006891) #13	NPFF (ENSMMSG00000006851) #14	TARBP2 (ENSMMSG00000006759) #15	MAP3K12 (ENSMMSG00000006599) #16	PCBP2 (ENSMMSG00000004497) #17	ENSMMSG00000004368 #18	AMHR2 (ENSMMSG00000022928) #19	SP1 (ENSMMSG00000022916) #20	ENSMMSG00000022914	SP7 (ENSMMSG00000022909) #21	AAAS (ENSMMSG00000022868) #22	MYG1 (ENSMMSG00000022839) #23	ENSMMSG00000022815 #24	ESPL1 (ENSMMSG00000022781) #25	MFSD5 (ENSMMSG00000022760) #26	RARG (ENSMMSG00000022717) #28	ITGB7 (ENSMMSG00000022688) #29	ZNF740 (ENSMMSG00000022675) #30	CSAD (ENSMMSG00000022614) #31	SOAT2 (ENSMMSG00000022566) #33	IGFBP6 (ENSMMSG00000022540) #34	SPRYD3 (ENSMMSG00000022512) #35	TNS2 (ENSMMSG00000022143) #36	EIF4B (ENSMMSG00000022018)	KRT18 (ENSMMSG00000021989)	ENSMMSG00000021973
Camelidae	ANCESTRAL SPECIES	27	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.l	ENSGT00970000195436
Arabian camel	MODERN SPECIES	3	HOXC10 (ENSCDRG00005004457) #7	HOXC11 (ENSCDRG00005004473) #8	HOXC12 (ENSCDRG00005004486) #9	HOXC13 (ENSCDRG00005004494) #10	CALCOCO1 (ENSCDRG00005004535) #11	ENSCDRG00005004636 #12	ATF7 (ENSCDRG00005004669) #13	NPFF (ENSCDRG00005004686) #14	TARBP2 (ENSCDRG00005004705) #15	MAP3K12 (ENSCDRG00005004763) #16	PCBP2 (ENSCDRG00005004874) #17	PRR13 (ENSCDRG00005005020) #18	AMHR2 (ENSCDRG00005005034) #19	SP1 (ENSCDRG00005005074) #20	SP7 (ENSCDRG00005005094) #21	AAAS (ENSCDRG00005005129) #22	MYG1 (ENSCDRG00005005242) #23	PFDN5 (ENSCDRG00005005285) #24	ESPL1 (ENSCDRG00005005411) #25	MFSD5 (ENSCDRG00005005519) #26	RARG (ENSCDRG00005005534) #28	ITGB7 (ENSCDRG00005005597) #29	ZNF740 (ENSCDRG00005005666) #30	CSAD (ENSCDRG00005005717) #31	SOAT2 (ENSCDRG00005005839) #33	SPRYD3 (ENSCDRG00005005926) #35	IGFBP6 (ENSCDRG00005006043) #34	TNS2 (ENSCDRG00005006132) #36	EIF4B (ENSCDRG00005006873)	ENSCDRG00005006986	ENSCDRG00005007095
Alpaca	MODERN SPECIES	733																ENSVPAG00000000953 #22	MYG1 (ENSVPAG00000000952) #23	PFDN5 (ENSVPAG00000000951) #24	ENSVPAG00000000949 #25	MFSD5 (ENSVPAG00000000948) #26	ZNF740 (ENSVPAG00000000947) #30	CSAD (ENSVPAG00000000946) #31
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Equus	ANCESTRAL SPECIES	16	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Donkey	MODERN SPECIES	14	HOXC10 (ENSEASG00005010143) #7	HOXC11 (ENSEASG00005010141) #8	HOXC12 (ENSEASG00005010128) #9	HOXC13 (ENSEASG00005032367) #10	CALCOCO1 (ENSEASG00005010125) #11	ENSEASG00005033090 #12	ATF7 (ENSEASG00005010041) #13	ENSEASG00005033454 #14	TARBP2 (ENSEASG00005010030) #15	MAP3K12 (ENSEASG00005010026) #16	ENSEASG00005010021 #17	PRR13 (ENSEASG00005030826) #18	AMHR2 (ENSEASG00005010020) #19	SP1 (ENSEASG00005010018) #20	SP7 (ENSEASG00005026327) #21	AAAS (ENSEASG00005009956) #22	MYG1 (ENSEASG00005009953) #23	PFDN5 (ENSEASG00005009949) #24	ESPL1 (ENSEASG00005009817) #25	MFSD5 (ENSEASG00005009753) #26	ENSEASG00005037807 #27	RARG (ENSEASG00005009743) #28	ITGB7 (ENSEASG00005009717) #29	ZNF740 (ENSEASG00005009710) #30	CSAD (ENSEASG00005009384) #31	SOAT2 (ENSEASG00005009300) #33	IGFBP6 (ENSEASG00005009293) #34	SPRYD3 (ENSEASG00005009289) #35	TNS2 (ENSEASG00005009273) #36	EIF4B (ENSEASG00005009268)	KRT18 (ENSEASG00005009265)
Horse	MODERN SPECIES	27	HOXC12 (ENSECAG00000024893) #9	HOXC11 (ENSECAG00000024900) #8	HOXC13 (ENSECAG00000024867) #10	CALCOCO1 (ENSECAG00000024023) #11	ATP5MC2 (ENSECAG00000023021) #12	ATF7 (ENSECAG00000021521) #13	NPFF (ENSECAG00000021139) #14	TARBP2 (ENSECAG00000011695) #15	MAP3K12 (ENSECAG00000010837) #16	ENSECAG00000022389 #17	PRR13 (ENSECAG00000042810) #18	AMHR2 (ENSECAG00000020247) #19	SP1 (ENSECAG00000028970) #20	SP7 (ENSECAG00000020140) #21	MYG1 (ENSECAG00000011273) #23	AAAS (ENSECAG00000012966) #22	PFDN5 (ENSECAG00000008454) #24	ESPL1 (ENSECAG00000022722) #25	MFSD5 (ENSECAG00000022554) #26	RARG (ENSECAG00000016596) #28	ITGB7 (ENSECAG00000013502) #29	ZNF740 (ENSECAG00000013071) #30	CSAD (ENSECAG00000006878) #31	SOAT2 (ENSECAG00000020109) #33	IGFBP6 (ENSECAG00000019633) #34	SPRYD3 (ENSECAG00000016252) #35	TNS2 (ENSECAG00000010909) #36	EIF4B (ENSECAG00000024091)	ENSECAG00000043286	ENSECAG00000038379	KRT8 (ENSECAG00000021775)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Greater horseshoe bat	MODERN SPECIES	1	HOXC10 (ENSRFEG00010002942) #7	HOXC11 (ENSRFEG00010002928) #8	HOXC12 (ENSRFEG00010002916) #9	HOXC13 (ENSRFEG00010002899) #10	CALCOCO1 (ENSRFEG00010002780) #11	ENSRFEG00010002728 #12	ATF7 (ENSRFEG00010002698) #13	NPFF (ENSRFEG00010002678) #14	TARBP2 (ENSRFEG00010002628) #15	MAP3K12 (ENSRFEG00010002570) #16	PCBP2 (ENSRFEG00010002468) #17	PRR13 (ENSRFEG00010002417) #18	AMHR2 (ENSRFEG00010002381) #19	SP1 (ENSRFEG00010002351) #20	SP7 (ENSRFEG00010002336) #21	AAAS (ENSRFEG00010002278) #22	MYG1 (ENSRFEG00010002224) #23	PFDN5 (ENSRFEG00010002194) #24	ESPL1 (ENSRFEG00010002105) #25	MFSD5 (ENSRFEG00010002068) #26	ENSRFEG00010002059 #27	RARG (ENSRFEG00010001971) #28	ITGB7 (ENSRFEG00010001861) #29	ZNF740 (ENSRFEG00010001819) #30	CSAD (ENSRFEG00010001736) #31	SOAT2 (ENSRFEG00010001666) #33	IGFBP6 (ENSRFEG00010001642) #34	SPRYD3 (ENSRFEG00010001612) #35	TNS2 (ENSRFEG00010001462) #36	EIF4B (ENSRFEG00010001396)	KRT18 (ENSRFEG00010001356)
Microbat	MODERN SPECIES	1097	HOXC8 (ENSMLUG00000003097)	HOXC9 (ENSMLUG00000000483)	HOXC10 (ENSMLUG00000000482) #7	HOXC11 (ENSMLUG00000000470) #8	HOXC12 (ENSMLUG00000026984) #9	HOXC13 (ENSMLUG00000015050) #10	CALCOCO1 (ENSMLUG00000011866) #11	ENSMLUG00000011860 #12	ATF7 (ENSMLUG00000007697) #13	NPFF (ENSMLUG00000026248) #14	TARBP2 (ENSMLUG00000010035) #15	MAP3K12 (ENSMLUG00000010002) #16	PCBP2 (ENSMLUG00000009971) #17	AMHR2 (ENSMLUG00000017305) #19	SP1 (ENSMLUG00000017303) #20	AAAS (ENSMLUG00000017298) #22	MYG1 (ENSMLUG00000017297) #23	PFDN5 (ENSMLUG00000017296) #24	ESPL1 (ENSMLUG00000017290) #25	MFSD5 (ENSMLUG00000017285) #26	RARG (ENSMLUG00000017284) #28	ITGB7 (ENSMLUG00000017277) #29	ZNF740 (ENSMLUG00000017275) #30	CSAD (ENSMLUG00000017271) #31	SOAT2 (ENSMLUG00000017267) #33	IGFBP6 (ENSMLUG00000017266) #34	SPRYD3 (ENSMLUG00000013050) #35	TNS2 (ENSMLUG00000013033) #36	EIF4B (ENSMLUG00000013021)	ENSMLUG00000022439	ENSMLUG00000004240
Megabat	MODERN SPECIES	688		HOXC11 (ENSPVAG00000012298) #8	HOXC12 (ENSPVAG00000012297) #9	HOXC13 (ENSPVAG00000012296) #10	CALCOCO1 (ENSPVAG00000012293) #11	ATP5MC2 (ENSPVAG00000012291)	ATF7 (ENSPVAG00000012289) #13	NPFF (ENSPVAG00000012288) #14	TARBP2 (ENSPVAG00000012286) #15	MAP3K12 (ENSPVAG00000012285) #16	PCBP2 (ENSPVAG00000012284) #17	ENSPVAG00000012283	AMHR2 (ENSPVAG00000012281) #19	SP1 (ENSPVAG00000012280) #20	SP7 (ENSPVAG00000012279) #21	AAAS (ENSPVAG00000012276) #22	MYG1 (ENSPVAG00000012275) #23	PFDN5 (ENSPVAG00000012274) #24	ESPL1 (ENSPVAG00000012271) #25
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.v #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Panthera	ANCESTRAL SPECIES		ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.v #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.v #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d
lion	MODERN SPECIES	7	HOXC11 (ENSPLOG00000004812) #8	HOXC12 (ENSPLOG00000004799) #9	HOXC13 (ENSPLOG00000004788) #10	ENSPLOG00000004763	CALCOCO1 (ENSPLOG00000004698) #11	ENSPLOG00000004664 #12	ATF7 (ENSPLOG00000004653) #13	NPFF (ENSPLOG00000004647) #14	TARBP2 (ENSPLOG00000004637) #15	MAP3K12 (ENSPLOG00000004592) #16	PCBP2 (ENSPLOG00000004549) #17	PRR13 (ENSPLOG00000004509) #18	AMHR2 (ENSPLOG00000004468) #19	SP1 (ENSPLOG00000004442) #20	SP7 (ENSPLOG00000004434) #21	AAAS (ENSPLOG00000004385) #22	MYG1 (ENSPLOG00000004326) #23	ENSPLOG00000004300 #24	ESPL1 (ENSPLOG00000004253) #25	MFSD5 (ENSPLOG00000004236) #26	ENSPLOG00000004229 #27	RARG (ENSPLOG00000004210) #28	ITGB7 (ENSPLOG00000004131) #29	ZNF740 (ENSPLOG00000004077) #30	CSAD (ENSPLOG00000004045) #31	SOAT2 (ENSPLOG00000004001) #33	IGFBP6 (ENSPLOG00000003974) #34	SPRYD3 (ENSPLOG00000003951) #35	TNS2 (ENSPLOG00000003813) #36	EIF4B (ENSPLOG00000003586)	KRT18 (ENSPLOG00000003515)
leopard	MODERN SPECIES	77	HOXC12 (ENSPPRG00000017257) #9	ENSPPRG00000017468 #10	ENSPPRG00000018754 #10	ENSPPRG00000019762	CALCOCO1 (ENSPPRG00000024719) #11	ENSPPRG00000023773 #12	ATF7 (ENSPPRG00000023291) #13	NPFF (ENSPPRG00000023107) #14	TARBP2 (ENSPPRG00000000189) #15	MAP3K12 (ENSPPRG00000001122) #16	PCBP2 (ENSPPRG00000005414) #17	PRR13 (ENSPPRG00000006236) #18	AMHR2 (ENSPPRG00000008074) #19	SP1 (ENSPPRG00000008912) #20	SP7 (ENSPPRG00000009172) #21	AAAS (ENSPPRG00000010054) #22	ENSPPRG00000011016 #23	ENSPPRG00000011404 #24	ESPL1 (ENSPPRG00000012544) #25	MFSD5 (ENSPPRG00000015955) #26	ENSPPRG00000015967 #27	RARG (ENSPPRG00000016824) #28	ITGB7 (ENSPPRG00000023772) #29	ZNF740 (ENSPPRG00000023629) #30	CSAD (ENSPPRG00000001296) #31	SOAT2 (ENSPPRG00000001733) #33	IGFBP6 (ENSPPRG00000001958) #34	SPRYD3 (ENSPPRG00000002219) #35	TNS2 (ENSPPRG00000006741) #36	EIF4B (ENSPPRG00000008730)	KRT18 (ENSPPRG00000009215)
Tiger	MODERN SPECIES	160	HOXC9 (ENSPTIG00000013688)	HOXC10 (ENSPTIG00000013134) #7	HOXC11 (ENSPTIG00000012999) #8	ENSPTIG00000012759	CALCOCO1 (ENSPTIG00000010683) #11	ENSPTIG00000010097 #12	ATF7 (ENSPTIG00000009129) #13	NPFF (ENSPTIG00000009027) #14	TARBP2 (ENSPTIG00000007859) #15	MAP3K12 (ENSPTIG00000006349) #16	ENSPTIG00000020757 #17	PRR13 (ENSPTIG00000019940) #18	AMHR2 (ENSPTIG00000018647) #19	SP1 (ENSPTIG00000018468) #20	SP7 (ENSPTIG00000018235) #21	AAAS (ENSPTIG00000016977) #22	MYG1 (ENSPTIG00000016171) #23	PFDN5 (ENSPTIG00000015595) #24	ESPL1 (ENSPTIG00000012412) #25	MFSD5 (ENSPTIG00000005497) #26	ENSPTIG00000005491 #27	RARG (ENSPTIG00000011244) #28	ITGB7 (ENSPTIG00000007998) #29	ZNF740 (ENSPTIG00000007587) #30	CSAD (ENSPTIG00000005979) #31	SOAT2 (ENSPTIG00000004607) #33	IGFBP6 (ENSPTIG00000002176) #34	SPRYD3 (ENSPTIG00000022015) #35	TNS2 (ENSPTIG00000017362) #36	EIF4B (ENSPTIG00000014635)	KRT18 (ENSPTIG00000011876)
Cat	MODERN SPECIES	238	HOXC9 (ENSFCAG00000031037)	HOXC10 (ENSFCAG00000011202) #7	HOXC11 (ENSFCAG00000038352) #8	HOXC12 (ENSFCAG00000023389) #9	HOXC13 (ENSFCAG00000044858) #10	CALCOCO1 (ENSFCAG00000012712) #11	ATP5MC2 (ENSFCAG00000001502) #12	ATF7 (ENSFCAG00000012783) #13	TARBP2 (ENSFCAG00000007757) #15	MAP3K12 (ENSFCAG00000012780) #16	PRR13 (ENSFCAG00000041253) #18	PCBP2 (ENSFCAG00000023348) #17	AMHR2 (ENSFCAG00000005894) #19	SP1 (ENSFCAG00000030741) #20	SP7 (ENSFCAG00000030976) #21	AAAS (ENSFCAG00000005881) #22	MYG1 (ENSFCAG00000050847) #23	ENSFCAG00000046899 #24	ESPL1 (ENSFCAG00000005874) #25	MFSD5 (ENSFCAG00000005873) #26	ENSFCAG00000040838 #27	RARG (ENSFCAG00000005870) #28	ITGB7 (ENSFCAG00000005869) #29	ZNF740 (ENSFCAG00000005868) #30	CSAD (ENSFCAG00000013234) #31	SOAT2 (ENSFCAG00000000307) #33	IGFBP6 (ENSFCAG00000000306) #34	SPRYD3 (ENSFCAG00000000305) #35	TNS2 (ENSFCAG00000000304) #36	EIF4B (ENSFCAG00000000300)	KRT18 (ENSFCAG00000000299)
Caniformia	ANCESTRAL SPECIES	19	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.o.b
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.o.b
Ursidae	ANCESTRAL SPECIES	36	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.y.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.ab.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.o.b
Ursus	ANCESTRAL SPECIES	39					ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.y.a #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.ab.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.o.b	ENSGT00940000153339.b
Polar bear	MODERN SPECIES	262	HOXC6 (ENSUMAG00000010520)	HOXC8 (ENSUMAG00000010514)	ENSUMAG00000010512	HOXC10 (ENSUMAG00000010505) #7	CALCOCO1 (ENSUMAG00000010484) #11	ENSUMAG00000010480 #12	ATF7 (ENSUMAG00000010473) #13	NPFF (ENSUMAG00000010468) #14	TARBP2 (ENSUMAG00000010461) #15	MAP3K12 (ENSUMAG00000010453) #16	PCBP2 (ENSUMAG00000010437) #17	PRR13 (ENSUMAG00000010429) #18	AMHR2 (ENSUMAG00000010400) #19	SP1 (ENSUMAG00000010388) #20	SP7 (ENSUMAG00000010381) #21	AAAS (ENSUMAG00000010370) #22	MYG1 (ENSUMAG00000010360) #23	ENSUMAG00000010344 #24	ESPL1 (ENSUMAG00000010029) #25	MFSD5 (ENSUMAG00000009999) #26	RARG (ENSUMAG00000009993) #28	ITGB7 (ENSUMAG00000009982) #29	ZNF740 (ENSUMAG00000009977) #30	CSAD (ENSUMAG00000009967) #31	SOAT2 (ENSUMAG00000009955) #33	SPRYD3 (ENSUMAG00000009949) #35	TNS2 (ENSUMAG00000009423) #36	EIF4B (ENSUMAG00000009372)	KRT18 (ENSUMAG00000009365)	KRT8 (ENSUMAG00000009361)	KRT78 (ENSUMAG00000009358)
American black bear	MODERN SPECIES	1955																AAAS (ENSUAMG00000003393) #22	MYG1 (ENSUAMG00000003341) #23	ENSUAMG00000003329 #24	ESPL1 (ENSUAMG00000003305) #25
Giant Panda	MODERN SPECIES	7	HOXC11 (ENSAMEG00000000668) #8	HOXC12 (ENSAMEG00000026141) #9	HOXC13 (ENSAMEG00000029355) #10	CALCOCO1 (ENSAMEG00000000633) #11	ENSAMEG00000000619 #12	ATF7 (ENSAMEG00000012625) #13	NPFF (ENSAMEG00000012622) #14	TARBP2 (ENSAMEG00000012601) #15	MAP3K12 (ENSAMEG00000012574) #16	PCBP2 (ENSAMEG00000012520) #17	ENSAMEG00000026467	PRR13 (ENSAMEG00000019417) #18	AMHR2 (ENSAMEG00000012496) #19	SP1 (ENSAMEG00000012479) #20	SP7 (ENSAMEG00000019390) #21	AAAS (ENSAMEG00000012432) #22	MYG1 (ENSAMEG00000026006) #23	ENSAMEG00000012414 #24	ESPL1 (ENSAMEG00000012346) #25	MFSD5 (ENSAMEG00000019354) #26	ENSAMEG00000027561 #27	RARG (ENSAMEG00000012299) #28	ITGB7 (ENSAMEG00000012226) #29	ZNF740 (ENSAMEG00000026317) #30	CSAD (ENSAMEG00000012173) #31	SOAT2 (ENSAMEG00000012141) #33	IGFBP6 (ENSAMEG00000025337) #34	SPRYD3 (ENSAMEG00000012120) #35	ENSAMEG00000012074 #36	ENSAMEG00000012023	ENSAMEG00000011981
Mustelinae	ANCESTRAL SPECIES	33	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157455.b.e	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00860000135771 #27	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d.o.b
American mink	MODERN SPECIES	304	HXC10 (ENSNVIG00000002291) #7	HOXC11 (ENSNVIG00000002270) #8	HOXC12 (ENSNVIG00000002217) #9	HOXC13 (ENSNVIG00000002210) #10	CALCOCO1 (ENSNVIG00000002092) #11	ENSNVIG00000002061	ATF7 (ENSNVIG00000001946) #13	NPFF (ENSNVIG00000001931) #14	TARBP2 (ENSNVIG00000001900) #15	MAP3K12 (ENSNVIG00000001854) #16	ENSNVIG00000001409 #17	PRR13 (ENSNVIG00000001375) #18	AMHR2 (ENSNVIG00000001357) #19	SP1 (ENSNVIG00000001335) #20	SP7 (ENSNVIG00000001314) #21	AAAS (ENSNVIG00000001213) #22	MYG1 (ENSNVIG00000001139) #23	PFDN5 (ENSNVIG00000001059) #24	ESPL1 (ENSNVIG00000000404) #25	MFSD5 (ENSNVIG00000000383) #26	ENSNVIG00000000374 #27	RARG (ENSNVIG00000000342) #28	ITGB7 (ENSNVIG00000000201) #29	ZNF740 (ENSNVIG00000000185) #30	CSAD (ENSNVIG00000000101) #31	SOAT2 (ENSNVIG00000000039) #33	IGFBP6 (ENSNVIG00000023318) #34	SPRYD3 (ENSNVIG00000023309) #35	TNS2 (ENSNVIG00000023249) #36	EIF4B (ENSNVIG00000023238)	ENSNVIG00000023237
Ferret	MODERN SPECIES	362	HOXC10 (ENSMPUG00000005868) #7	HOXC11 (ENSMPUG00000005876) #8	HOXC12 (ENSMPUG00000005886) #9	HOXC13 (ENSMPUG00000005890) #10	ENSMPUG00000005897	CALCOCO1 (ENSMPUG00000005917) #11	ENSMPUG00000005927	ATF7 (ENSMPUG00000005932) #13	TARBP2 (ENSMPUG00000005944) #15	MAP3K12 (ENSMPUG00000005953) #16	PCBP2 (ENSMPUG00000005980) #17	PRR13 (ENSMPUG00000005995) #18	AMHR2 (ENSMPUG00000006005) #19	SP1 (ENSMPUG00000006016) #20	SP7 (ENSMPUG00000006036) #21	AAAS (ENSMPUG00000006044) #22	MYG1 (ENSMPUG00000006052) #23	ENSMPUG00000006059 #24	ESPL1 (ENSMPUG00000006087) #25	MFSD5 (ENSMPUG00000006104) #26	RARG (ENSMPUG00000006113) #28	ITGB7 (ENSMPUG00000006121) #29	ZNF740 (ENSMPUG00000006131) #30	CSAD (ENSMPUG00000006140) #31	SOAT2 (ENSMPUG00000006149) #33	IGFBP6 (ENSMPUG00000006160) #34	SPRYD3 (ENSMPUG00000006180) #35	TNS2 (ENSMPUG00000006189) #36	EIF4B (ENSMPUG00000006220)	ENSMPUG00000006369	ENSMPUG00000006441
Canidae	ANCESTRAL SPECIES	8	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.cb.a.a #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b.c #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.i.b	ENSGT00940000153309.d.o.b	ENSGT00940000153339.b.k.a
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000154651.j.b	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.cb.a.a #24	ENSGT00390000004990 #25	ENSGT00390000012138.a.a.j.s.f.a	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b.c #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336.i.b	ENSGT00940000153309.d.o.b
Dog	MODERN SPECIES	19	HOXC8 (ENSCAFG00845018237)	ENSCAFG00845018282	HOXC10 (ENSCAFG00845018342) #7	HOXC11 (ENSCAFG00845018373) #8	HOXC12 (ENSCAFG00845018411) #9	HOXC13 (ENSCAFG00845018448) #10	ENSCAFG00845018482	CALCOCO1 (ENSCAFG00845018567) #11	ENSCAFG00845018811	ATF7 (ENSCAFG00845018892) #13	TARBP2 (ENSCAFG00845019060) #15	MAP3K12 (ENSCAFG00845019204) #16	ENSCAFG00845019393 #17	PRR13 (ENSCAFG00845019602) #18	SP1 (ENSCAFG00845019670) #20	AAAS (ENSCAFG00845019773) #22	C27H12orf10 (ENSCAFG00845020121) #23	PFDN5 (ENSCAFG00845020284) #24	ESPL1 (ENSCAFG00845020502) #25	ENSCAFG00845021046	MFSD5 (ENSCAFG00845021076) #26	ENSCAFG00845021117 #34	RARG (ENSCAFG00845021228) #28	ITGB7 (ENSCAFG00845021413) #29	ZNF740 (ENSCAFG00845021661) #30	CSAD (ENSCAFG00845021812) #31	SOAT2 (ENSCAFG00845022156) #33	SPRYD3 (ENSCAFG00845022297) #35	TNS2 (ENSCAFG00845022708) #36	EIF4B (ENSCAFG00845023395)	KRT18 (ENSCAFG00845023645)
Dingo	MODERN SPECIES	202	HOXC8 (ENSCAFG00020020648)	HOXC9 (ENSCAFG00020020653)	HOXC10 (ENSCAFG00020020660) #7	HOXC11 (ENSCAFG00020020666) #8	HOXC12 (ENSCAFG00020020691) #9	HOXC13 (ENSCAFG00020020697) #10	ENSCAFG00020020699	CALCOCO1 (ENSCAFG00020020705) #11	ENSCAFG00020020717 #12	ATF7 (ENSCAFG00020020729) #13	TARBP2 (ENSCAFG00020020735) #15	MAP3K12 (ENSCAFG00020020750) #16	PCBP2 (ENSCAFG00020020983) #17	AMHR2 (ENSCAFG00020021015) #19	SP1 (ENSCAFG00020021019) #20	AAAS (ENSCAFG00020021032) #22	MYG1 (ENSCAFG00020021220) #23	ENSCAFG00020021228 #24	ESPL1 (ENSCAFG00020021234) #25	ENSCAFG00020021248	MFSD5 (ENSCAFG00020021254) #26	RARG (ENSCAFG00020021255) #28	ENSCAFG00020021261 #29	ENSCAFG00020021265 #29	CSAD (ENSCAFG00020021290) #31	SOAT2 (ENSCAFG00020021371) #33	IGFBP6 (ENSCAFG00020021373) #34	SPRYD3 (ENSCAFG00020021374) #35	TNS2 (ENSCAFG00020021401) #36	ENSCAFG00020021664	ENSCAFG00020021666
Red fox	MODERN SPECIES	32	HOXC9 (ENSVVUG00000028202)	HOXC10 (ENSVVUG00000028196) #7	HOXC11 (ENSVVUG00000028193) #8	ENSVVUG00000028182 #9	HOXC13 (ENSVVUG00000028177) #10	ENSVVUG00000028173	CALCOCO1 (ENSVVUG00000028166) #11	ENSVVUG00000028163	ATF7 (ENSVVUG00000028157) #13	TARBP2 (ENSVVUG00000028150) #15	MAP3K12 (ENSVVUG00000028137) #16	PCBP2 (ENSVVUG00000028129) #17	AMHR2 (ENSVVUG00000028127) #19	SP1 (ENSVVUG00000028123) #20	SP7 (ENSVVUG00000028120) #21	AAAS (ENSVVUG00000028112) #22	ENSVVUG00000028098 #24	MYG1 (ENSVVUG00000028076) #23	ENSVVUG00000028073	ESPL1 (ENSVVUG00000028069) #25	MFSD5 (ENSVVUG00000028067) #26	RARG (ENSVVUG00000028065) #28	ITGB7 (ENSVVUG00000028061) #29	ENSVVUG00000028054	CSAD (ENSVVUG00000028042) #31	SOAT2 (ENSVVUG00000028038) #33	IGFBP6 (ENSVVUG00000028035) #34	SPRYD3 (ENSVVUG00000028027) #35	ENSVVUG00000028023 #36	ENSVVUG00000028018	ENSVVUG00000028016
Atlantogenata	ANCESTRAL SPECIES	33	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d	ENSGT00940000153339
Xenarthra	ANCESTRAL SPECIES	47	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00730000111608 #18	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336
Sloth	MODERN SPECIES	156																AAAS (ENSCHOG00000004679) #22
Armadillo	MODERN SPECIES	2448	HOXC10 (ENSDNOG00000017505) #7	HOXC11 (ENSDNOG00000017503) #8	HOXC12 (ENSDNOG00000033631) #9	HOXC13 (ENSDNOG00000048301) #10	CALCOCO1 (ENSDNOG00000032227) #11	ATP5MC2 (ENSDNOG00000009429)	ATF7 (ENSDNOG00000008735) #13	TARBP2 (ENSDNOG00000002144) #15	ENSDNOG00000008709 #16	ENSDNOG00000035361 #17	PRR13 (ENSDNOG00000034392) #18	AMHR2 (ENSDNOG00000016742) #19	SP1 (ENSDNOG00000017346) #20	ENSDNOG00000042952	SP7 (ENSDNOG00000013009) #21	AAAS (ENSDNOG00000039341) #22	ENSDNOG00000035598 #23	PFDN5 (ENSDNOG00000034200) #24	ESPL1 (ENSDNOG00000012939) #25	MFSD5 (ENSDNOG00000032000) #26	ITGB7 (ENSDNOG00000012912) #29	ZNF740 (ENSDNOG00000033888) #30	CSAD (ENSDNOG00000012871) #31	SOAT2 (ENSDNOG00000009436) #33	IGFBP6 (ENSDNOG00000000264) #34	SPRYD3 (ENSDNOG00000012484) #35	TNS2 (ENSDNOG00000034981) #36	ENSDNOG00000034034
Afrotheria	ANCESTRAL SPECIES	40	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d	ENSGT00940000153339
Afrotheria_a	ANCESTRAL SPECIES	40	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157455	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00520000058554	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309.d	ENSGT00940000153339
Elephant	MODERN SPECIES	196	HOXC10 (ENSLAFG00000018137) #7	HOXC11 (ENSLAFG00000018133) #8	HOXC12 (ENSLAFG00000024750) #9	HOXC13 (ENSLAFG00000030195) #10	CALCOCO1 (ENSLAFG00000015535) #11	ATP5MC2 (ENSLAFG00000015528)	ATF7 (ENSLAFG00000002626) #13	TARBP2 (ENSLAFG00000002620) #15	ENSLAFG00000029818	MAP3K12 (ENSLAFG00000002616) #16	ENSLAFG00000013187 #17	ENSLAFG00000013184	AMHR2 (ENSLAFG00000018046) #19	SP1 (ENSLAFG00000018043) #20	SP7 (ENSLAFG00000013129) #21	AAAS (ENSLAFG00000018038) #22	MYG1 (ENSLAFG00000018032) #23	ENSLAFG00000027020 #24	ESPL1 (ENSLAFG00000008351) #25	MFSD5 (ENSLAFG00000008349) #26	RARG (ENSLAFG00000008347) #28	ITGB7 (ENSLAFG00000009194) #29	ZNF740 (ENSLAFG00000009191) #30	CSAD (ENSLAFG00000026715) #31	SOAT2 (ENSLAFG00000012870) #33	IGFBP6 (ENSLAFG00000027851) #34	SPRYD3 (ENSLAFG00000013333) #35	TNS2 (ENSLAFG00000009544) #36	EIF4B (ENSLAFG00000009534)	KRT18 (ENSLAFG00000003179)	KRT8 (ENSLAFG00000028611)
Hyrax	MODERN SPECIES	2947															SP7 (ENSPCAG00000012545) #21	AAAS (ENSPCAG00000012459) #22	PFDN5 (ENSPCAG00000012413) #24	ESPL1 (ENSPCAG00000012180) #25	RARG (ENSPCAG00000012059) #28	ITGB7 (ENSPCAG00000011924) #29	ZNF740 (ENSPCAG00000011869) #30	ENSPCAG00000011767 #31
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	3113																ENSETEG00000002113 #22	ENSETEG00000002112 #23	PFDN5 (ENSETEG00000002111) #24	ESPL1 (ENSETEG00000002107) #25
Tenrec	MODERN SPECIES	14829																ENSETEG00000012809 #22
Marsupialia	ANCESTRAL SPECIES	24	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339
Diprotodontia	ANCESTRAL SPECIES	29	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.f #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309
Diprotodontia_a	ANCESTRAL SPECIES	29	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b.f #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783.qb #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886	ENSGT00950000183081.a.a.b #33	ENSGT00940000160528 #34	ENSGT00940000158675 #35	ENSGT00940000161535 #36	ENSGT00940000153336	ENSGT00940000153309
Common wonbat	MODERN SPECIES	793				HOXC12 (ENSVURG00010010771) #9	HOXC13 (ENSVURG00010010776) #10	CALCOCO1 (ENSVURG00010010795) #11	ENSVURG00010010814 #12	ATF7 (ENSVURG00010010840) #13	TARBP2 (ENSVURG00010010864) #15	MAP3K12 (ENSVURG00010010877) #16	PCBP2 (ENSVURG00010010916) #17	ENSVURG00010010974	AMHR2 (ENSVURG00010010987) #19	SP1 (ENSVURG00010011017) #20	SP7 (ENSVURG00010011030) #21	AAAS (ENSVURG00010011046) #22	ENSVURG00010011090 #23	ENSVURG00010011103 #24	ESPL1 (ENSVURG00010011152) #25	MFSD5 (ENSVURG00010011235) #26	RARG (ENSVURG00010011242) #28	ITGB7 (ENSVURG00010011266) #29	ZNF740 (ENSVURG00010011298) #30	CSAD (ENSVURG00010011317) #31	ENSVURG00010011346	SOAT2 (ENSVURG00010011356) #33	IGFBP6 (ENSVURG00010011364) #34	SPRYD3 (ENSVURG00010011377) #35	TNS2 (ENSVURG00010011411) #36	EIF4B (ENSVURG00010011541)	KRT18 (ENSVURG00010011564)
koala	MODERN SPECIES	165	HOXC9 (ENSPCIG00000037360)	HOXC10 (ENSPCIG00000006695) #7	HOXC11 (ENSPCIG00000006693) #8	HOXC12 (ENSPCIG00000006689) #9	HOXC13 (ENSPCIG00000006688) #10	CALCOCO1 (ENSPCIG00000006685) #11	ENSPCIG00000006683 #12	ATF7 (ENSPCIG00000006677) #13	NPFF (ENSPCIG00000006674) #14	TARBP2 (ENSPCIG00000006672) #15	MAP3K12 (ENSPCIG00000006667) #16	PCBP2 (ENSPCIG00000006658) #17	AMHR2 (ENSPCIG00000006651) #19	SP1 (ENSPCIG00000006649) #20	SP7 (ENSPCIG00000006646) #21	AAAS (ENSPCIG00000006642) #22	ENSPCIG00000006639 #23	ENSPCIG00000006634 #24	ESPL1 (ENSPCIG00000005389) #25	MFSD5 (ENSPCIG00000005331) #26	RARG (ENSPCIG00000005306) #28	ITGB7 (ENSPCIG00000005268) #29	ZNF740 (ENSPCIG00000005254) #30	CSAD (ENSPCIG00000005239) #31	ENSPCIG00000035255	ENSPCIG00000005217	SOAT2 (ENSPCIG00000005204) #33	IGFBP6 (ENSPCIG00000005195) #34	SPRYD3 (ENSPCIG00000011234) #35	TNS2 (ENSPCIG00000011220) #36	EIF4B (ENSPCIG00000011212)
Wallaby	MODERN SPECIES	4134																AAAS (ENSMEUG00000012126) #22	MYG1 (ENSMEUG00000012114) #23	PFDN5 (ENSMEUG00000012110) #24	ESPL1 (ENSMEUG00000012046) #25
Tasmanian devil	MODERN SPECIES	4	HOXC10 (ENSSHAG00000006601) #7	HOXC11 (ENSSHAG00000027021) #8	HOXC12 (ENSSHAG00000032054) #9	HOXC13 (ENSSHAG00000024515) #10	CALCOCO1 (ENSSHAG00000004757) #11	ENSSHAG00000020669 #12	ATF7 (ENSSHAG00000006701) #13	NPFF (ENSSHAG00000007053) #14	TARBP2 (ENSSHAG00000007064) #15	MAP3K12 (ENSSHAG00000007265) #16	ENSSHAG00000007342 #17	ENSSHAG00000027175	AMHR2 (ENSSHAG00000001044) #19	SP1 (ENSSHAG00000003502) #20	SP7 (ENSSHAG00000025485) #21	AAAS (ENSSHAG00000005509) #22	PFDN5 (ENSSHAG00000030064) #24	ENSSHAG00000004455 #25	ENSSHAG00000005453 #23	MFSD5 (ENSSHAG00000026364) #26	RARG (ENSSHAG00000002378) #28	ITGB7 (ENSSHAG00000001218) #29	ZNF740 (ENSSHAG00000023992) #30	CSAD (ENSSHAG00000001476) #31	SOAT2 (ENSSHAG00000001418) #33	IGFBP6 (ENSSHAG00000002190) #34	SPRYD3 (ENSSHAG00000001889) #35	TNS2 (ENSSHAG00000021258) #36	EIF4B (ENSSHAG00000003682)	KRT18 (ENSSHAG00000005702)	KRT8 (ENSSHAG00000002794)
Platypus	MODERN SPECIES	1	HOXC9 (ENSOANG00000047626)	HOXC10 (ENSOANG00000013041) #7	HOXC11 (ENSOANG00000013040) #8	HOXC12 (ENSOANG00000015091) #9	HOXC13 (ENSOANG00000015090) #10	CALCOCO1 (ENSOANG00000043577) #11	ENSOANG00000011230 #12	ATF7 (ENSOANG00000037869) #13	ENSOANG00000036045	TARBP2 (ENSOANG00000038528) #15	MAP3K12 (ENSOANG00000045742) #16	PCBP2 (ENSOANG00000046601) #17	AMHR2 (ENSOANG00000040113) #19	ENSOANG00000037395 #20	SP7 (ENSOANG00000043620) #21	AAAS (ENSOANG00000049038) #22	ENSOANG00000045056 #23	PFDN5 (ENSOANG00000010773) #24	ESPL1 (ENSOANG00000051340) #25	MFSD5 (ENSOANG00000047684) #26	RARG (ENSOANG00000012236) #28	ITGB7 (ENSOANG00000005915) #29	ZNF740 (ENSOANG00000049477) #30	CSAD (ENSOANG00000039630) #31	SOAT2 (ENSOANG00000021000) #33	ENSOANG00000040336 #34	SPRYD3 (ENSOANG00000013039) #35	EIF4B (ENSOANG00000009940)	KRT18 (ENSOANG00000045852)	ENSOANG00000001940	ENSOANG00000002920
Sauria	ANCESTRAL SPECIES	25	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29
Archelosauria	ANCESTRAL SPECIES	26	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29
Archosauria	ANCESTRAL SPECIES	33	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886
Aves	ANCESTRAL SPECIES	41	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886
Neognathae	ANCESTRAL SPECIES	31	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886
Galloanserae	ANCESTRAL SPECIES	37	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00940000173886
Anatidae	ANCESTRAL SPECIES	125															ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366
Duck	MODERN SPECIES	31															ENSAPLG00000026205 #21	AAAS (ENSAPLG00000029097) #22	MYG1 (ENSAPLG00000030654) #23	VDR (ENSAPLG00000005087)	SENP1 (ENSAPLG00000010680)	PFKM (ENSAPLG00000026256)	MARS1 (ENSAPLG00000014821)	ENSAPLG00000001411	GLI1 (ENSAPLG00000024305)	ENSAPLG00000026069	INHBC (ENSAPLG00000024015)	R3HDM2 (ENSAPLG00000004298)	STAC3 (ENSAPLG00000004189)	ENSAPLG00000026322	ENSAPLG00000023380	ENSAPLG00000026068	ENSAPLG00000019820
Pink-footed goose	MODERN SPECIES	535															SP7 (ENSABRG00000013768) #21	AAAS (ENSABRG00000013804) #22	MYG1 (ENSABRG00000013840) #23	VDR (ENSABRG00000013874)	TMEM106C (ENSABRG00000013893)	COL2A1 (ENSABRG00000013919)
Phasianidae	ANCESTRAL SPECIES	25	ENSGT00940000161023	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00940000158240 #31	ENSGT00940000159609 #30	ENSGT01090000259987.a.a.b #29	ENSGT00940000156458 #28	ENSGT00390000012629 #26	ENSGT00940000173886
Phasianidae_b	ANCESTRAL SPECIES	37	ENSGT00940000158801	ENSGT00390000004897.o	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00940000154265.bc.c.a.a.b	ENSGT00940000158240 #31	ENSGT00940000159609 #30	ENSGT01090000259987.a.a.b #29	ENSGT00940000156458 #28	ENSGT00390000012629 #26	ENSGT00940000173886
Chicken	MODERN SPECIES	27	HOXC8 (ENSGALG00010025708)	HOXC9 (ENSGALG00010025958)	HOXC10 (ENSGALG00010025964) #7	HOXC11 (ENSGALG00010025719) #8	HOXC12 (ENSGALG00010025552) #9	HOXC13 (ENSGALG00010025397) #10	ENSGALG00010022734 #12	ATF7 (ENSGALG00010024238) #13	NPFF (ENSGALG00010024241)	TARBP2 (ENSGALG00010024245) #15	MAP3K12 (ENSGALG00010024267) #16	PCBP2 (ENSGALG00010024325) #17	AMHR2 (ENSGALG00010024335) #19	SP1 (ENSGALG00010024351) #20	ENSGALG00010024365	AAAS (ENSGALG00010024389) #22	MYG1 (ENSGALG00010024410) #23	VDR (ENSGALG00010024416)	TMEM106C (ENSGALG00010024420)	SENP1 (ENSGALG00010024465)	PFKM (ENSGALG00010024547)	ASB8 (ENSGALG00010024553)	ENSGALG00010024556	PFDN5 (ENSGALG00010024558) #24	ESPL1 (ENSGALG00010024563) #25	ENSGALG00010024573	CSAD (ENSGALG00010024576) #31	ZNF740 (ENSGALG00010024579) #30	ITGB7 (ENSGALG00010024583) #29	MFSD5 (ENSGALG00010024604) #26	RARG (ENSGALG00010024607) #28
Turkey	MODERN SPECIES	1011																ENSMGAG00000022573 #22	ENSMGAG00000022375 #23	ENSMGAG00000004846	ENSMGAG00000004877
Japanese quail	MODERN SPECIES	43	HOXC6 (ENSCJPG00005007698)	HOXC8 (ENSCJPG00005007699)	HOXC9 (ENSCJPG00005007700)	HOXC10 (ENSCJPG00005007702) #7	HOXC11 (ENSCJPG00005007703) #8	HOXC13 (ENSCJPG00005007704) #10	ENSCJPG00005007709 #12	ATF7 (ENSCJPG00005007711) #13	ENSCJPG00005007713	ENSCJPG00005007715	ENSCJPG00005007716 #15	MAP3K12 (ENSCJPG00005007718) #16	PCBP2 (ENSCJPG00005007888) #17	SP1 (ENSCJPG00005007894) #20	ENSCJPG00005007897	AAAS (ENSCJPG00005007913) #22	MYG1 (ENSCJPG00005007919) #23	VDR (ENSCJPG00005007922)	TMEM106C (ENSCJPG00005007927)	COL2A1 (ENSCJPG00005007932)	SENP1 (ENSCJPG00005007946)	PFKM (ENSCJPG00005007950)	ASB8 (ENSCJPG00005007951)	ENSCJPG00005007952	ESPL1 (ENSCJPG00005007953) #25	ENSCJPG00005007954	CSAD (ENSCJPG00005007955) #31	ZNF740 (ENSCJPG00005007956) #30	ENSCJPG00005007957 #29	RARG (ENSCJPG00005007958) #28	MFSD5 (ENSCJPG00005007960) #26
Neognathae_b	ANCESTRAL SPECIES	30	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25
Neognathae_c	ANCESTRAL SPECIES	34	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000008783 #24	ENSGT00390000004990 #25
Kakapo	MODERN SPECIES	15	DAZAP2 (ENSSHBG00005020394)	SMAGP (ENSSHBG00005020396)	BIN2 (ENSSHBG00005020400)	ENSSHBG00005020406	ENSSHBG00005020411	GALNT6 (ENSSHBG00005020420)	SLC4A8 (ENSSHBG00005020437)	TARBP2 (ENSSHBG00005020456) #15	MAP3K12 (ENSSHBG00005020459) #16	ENSSHBG00005020466	ENSSHBG00005020472	PCBP2 (ENSSHBG00005020490) #17	AMHR2 (ENSSHBG00005020511) #19	SP1 (ENSSHBG00005020520) #20	SP7 (ENSSHBG00005020523) #21	AAAS (ENSSHBG00005020532) #22	MYG1 (ENSSHBG00005020536) #23	VDR (ENSSHBG00005020542)	TMEM106C (ENSSHBG00005020552)	COL2A1 (ENSSHBG00005020568)	SENP1 (ENSSHBG00005020604)	PFKM (ENSSHBG00005020639)	ASB8 (ENSSHBG00005020645)	ENSSHBG00005020652	PFDN5 (ENSSHBG00005020657) #24	ESPL1 (ENSSHBG00005020705) #25	BCDIN3D (ENSSHBG00005020729)	ENSSHBG00005020731	ENSSHBG00005020735	ENSSHBG00005020743	ENSSHBG00005020765
Golden eagle	MODERN SPECIES	6	HOXC9 (ENSACCG00020009698)	HOXC10 (ENSACCG00020009716) #7	HOXC11 (ENSACCG00020009738) #8	HOXC12 (ENSACCG00020009752) #9	HOXC13 (ENSACCG00020009769) #10	ENSACCG00020009790 #12	ATF7 (ENSACCG00020009825) #13	ENSACCG00020009852	ENSACCG00020009866 #15	ENSACCG00020009882 #15	MAP3K12 (ENSACCG00020009899) #16	PCBP2 (ENSACCG00020009932) #17	AMHR2 (ENSACCG00020009950) #19	SP1 (ENSACCG00020009967) #20	ENSACCG00020010022	AAAS (ENSACCG00020010065) #22	MYG1 (ENSACCG00020010078) #23	VDR (ENSACCG00020010088)	TMEM106C (ENSACCG00020010101)	COL2A1 (ENSACCG00020010155)	SENP1 (ENSACCG00020010196)	ENSACCG00020010210	PFKM (ENSACCG00020010225)	ASB8 (ENSACCG00020010239)	PFDN5 (ENSACCG00020011466) #24	C1QL4 (ENSACCG00020011541)	DNAJC22 (ENSACCG00020011560)	SPATS2 (ENSACCG00020011580)	KCNH3 (ENSACCG00020011660)	MCRS1 (ENSACCG00020011760)	ITGA7 (ENSACCG00020012060)
Passeriformes	ANCESTRAL SPECIES	49	ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00740000115581.e
Great tit	MODERN SPECIES	276							HOXC13 (ENSPMJG00000000827) #10	ENSPMJG00000000824 #12	ATF7 (ENSPMJG00000000810) #13	ENSPMJG00000000806 #15	MAP3K12 (ENSPMJG00000000797) #16	PCBP2 (ENSPMJG00000000734) #17	AMHR2 (ENSPMJG00000000705) #19	SP1 (ENSPMJG00000000695) #20	SP7 (ENSPMJG00000000660) #21	AAAS (ENSPMJG00000000640) #22	MYG1 (ENSPMJG00000000630) #23	VDR (ENSPMJG00000000611)	TMEM106C (ENSPMJG00000000589)	COL2A1 (ENSPMJG00000000506)	SENP1 (ENSPMJG00000000428)	PFKM (ENSPMJG00000000399)	ASB8 (ENSPMJG00000000372)	ENSPMJG00000000368
Passeriformes_d	ANCESTRAL SPECIES	45		ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473.h	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d.l	ENSGT00940000159366	ENSGT00740000115581.e
Flycatcher	MODERN SPECIES	319															SP1 (ENSFALG00000001318) #20	ENSFALG00000001303 #22	MYG1 (ENSFALG00000001289) #23	ENSFALG00000001285	ENSFALG00000001283
Passeriformes_g	ANCESTRAL SPECIES	56		ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473.h	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d.l	ENSGT00940000159366	ENSGT00740000115581.e
Medium ground finch	MODERN SPECIES	415														PCBP2 (ENSGFOG00000002750) #17	ENSGFOG00000002720 #20	AAAS (ENSGFOG00000002642) #22	ENSGFOG00000002628 #23	VDR (ENSGFOG00000002430)	TMEM106C (ENSGFOG00000002399)	SENP1 (ENSGFOG00000002252)	PFKM (ENSGFOG00000002211)	ASB8 (ENSGFOG00000002151)	ENSGFOG00000002102
Passeroidea	ANCESTRAL SPECIES	58		ENSGT00940000159254	ENSGT00940000161194	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00940000155473.h	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d.l	ENSGT00940000159366	ENSGT00740000115581.e
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	22	ENSTGUG00000024758	ENSTGUG00000015572	ENSTGUG00000014303	ENSTGUG00000028506 #7	ENSTGUG00000029253 #8	HOXC12 (ENSTGUG00000016959) #9	ENSTGUG00000018823 #10	ENSTGUG00000019351 #13	ENSTGUG00000025685 #15	ENSTGUG00000023957 #15	ENSTGUG00000023166 #16	ENSTGUG00000016232 #17	ENSTGUG00000021232 #19	ENSTGUG00000020153 #20	ENSTGUG00000028639 #21	ENSTGUG00000023338 #22	ENSTGUG00000025076 #23	ENSTGUG00000029269	ENSTGUG00000027589	ENSTGUG00000028804	ENSTGUG00000029376	ENSTGUG00000024525	ENSTGUG00000029058	ENSTGUG00000021259	ENSTGUG00000019886	ENSTGUG00000021283	ENSTGUG00000003479	ENSTGUG00000003412	ENSTGUG00000003391	ATF1 (ENSTGUG00000027804)	ENSTGUG00000003382
Zebra finch	MODERN SPECIES	22	ENSTGUG00000024186	ENSTGUG00000028939	HOXC4 (ENSTGUG00000028387)	ENSTGUG00000023038	ENSTGUG00000023138	ENSTGUG00000015566	ENSTGUG00000014511 #7	ENSTGUG00000027959 #8	ENSTGUG00000023354 #10	ENSTGUG00000017046 #13	ENSTGUG00000026425 #15	ENSTGUG00000029660 #16	ENSTGUG00000028344 #17	ENSTGUG00000022474 #19	ENSTGUG00000022073 #20	ENSTGUG00000027678 #22	ENSTGUG00000028340 #23	ENSTGUG00000017093	ENSTGUG00000029458	COL1A1 (ENSTGUG00000024335)	ENSTGUG00000003284	ENSTGUG00000020432 #15	ENSTGUG00000003546	ENSTGUG00000029291	ENSTGUG00000027694	ENSTGUG00000026704 #21	ENSTGUG00000025968	ENSTGUG00000025052	ENSTGUG00000019082	ENSTGUG00000022305	ENSTGUG00000025020
African ostrich	MODERN SPECIES	691						HOXC4 (ENSSCUG00000009179)	HOXC6 (ENSSCUG00000009181)	HOXC8 (ENSSCUG00000009183)	ENSSCUG00000009185	HOXC10 (ENSSCUG00000009186) #7	HOXC11 (ENSSCUG00000009188) #8	ATF7 (ENSSCUG00000009193) #13	MAP3K12 (ENSSCUG00000009196) #16	PCBP2 (ENSSCUG00000009200) #17	SP1 (ENSSCUG00000009204) #20	AAAS (ENSSCUG00000009210) #22	MYG1 (ENSSCUG00000009214) #23	VDR (ENSSCUG00000009219)	TMEM106C (ENSSCUG00000009223)
Australian saltwater crocodile	MODERN SPECIES	12				CALCOCO1 (ENSCPRG00005006850) #11	ENSCPRG00005006863	ENSCPRG00005006864 #12	ATF7 (ENSCPRG00005006870) #13	NPFF (ENSCPRG00005006878) #14	TARBP2 (ENSCPRG00005006888) #15	ENSCPRG00005006894	MAP3K12 (ENSCPRG00005006900) #16	PCBP2 (ENSCPRG00005006914) #17	AMHR2 (ENSCPRG00005006942) #19	SP1 (ENSCPRG00005006979) #20	SP7 (ENSCPRG00005006987) #21	AAAS (ENSCPRG00005006993) #22	MYG1 (ENSCPRG00005007001) #23	VDR (ENSCPRG00005007013)	TMEM106C (ENSCPRG00005007033)	SENP1 (ENSCPRG00005007043)	PFKM (ENSCPRG00005007122)	ASB8 (ENSCPRG00005007574)	ENSCPRG00005007580	PFDN5 (ENSCPRG00005007584) #24	ESPL1 (ENSCPRG00005007593) #25	MFSD5 (ENSCPRG00005007633) #26	ENSCPRG00005007636
Cryptodira	ANCESTRAL SPECIES	25	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29
Testudinoidea	ANCESTRAL SPECIES	21	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29
Emydidae	ANCESTRAL SPECIES	34	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29
Three-toed box turtle	MODERN SPECIES	383	HOXC9 (ENSTMTG00000004828)	HOXC10 (ENSTMTG00000004853) #7	HOXC11 (ENSTMTG00000004871) #8	HOXC12 (ENSTMTG00000004887) #9	HOXC13 (ENSTMTG00000004896) #10	CALCOCO1 (ENSTMTG00000004927) #11	ENSTMTG00000004989 #12	ATF7 (ENSTMTG00000005026) #13	TARBP2 (ENSTMTG00000005163) #15	ENSTMTG00000005186	MAP3K12 (ENSTMTG00000005204) #16	PCBP2 (ENSTMTG00000005243) #17	AMHR2 (ENSTMTG00000005331) #19	SP1 (ENSTMTG00000005365) #20	SP7 (ENSTMTG00000005372) #21	AAAS (ENSTMTG00000005384) #22	ENSTMTG00000005427	VDR (ENSTMTG00000005441)	TMEM106C (ENSTMTG00000005459)	COL2A1 (ENSTMTG00000005481)	SENP1 (ENSTMTG00000005570)	PFKM (ENSTMTG00000005865)	ASB8 (ENSTMTG00000008769)	ENSTMTG00000008782	PFDN5 (ENSTMTG00000008802) #24	ESPL1 (ENSTMTG00000008835) #25	MFSD5 (ENSTMTG00000008904) #26	ENSTMTG00000008909	RARG (ENSTMTG00000008939) #28	ITGB7 (ENSTMTG00000008994) #29	ZNF740 (ENSTMTG00000009368) #30
painted turtle	MODERN SPECIES	845	HOXC12 (ENSCPBG00000000425) #9	HOXC13 (ENSCPBG00000000447) #10	CALCOCO1 (ENSCPBG00000000511) #11	ENSCPBG00000000551 #12	ATF7 (ENSCPBG00000000581) #13	NPFF (ENSCPBG00000000635) #14	TARBP2 (ENSCPBG00000000654) #15	ENSCPBG00000000687	ENSCPBG00000000700	MAP3K12 (ENSCPBG00000000760) #16	PCBP2 (ENSCPBG00000001467) #17	AMHR2 (ENSCPBG00000001530) #19	SP1 (ENSCPBG00000001711) #20	ENSCPBG00000001726 #21	ENSCPBG00000001783	AAAS (ENSCPBG00000001788) #22	ENSCPBG00000001804	MYG1 (ENSCPBG00000001813) #23	VDR (ENSCPBG00000001825)
Testudinidae	ANCESTRAL SPECIES	25	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000155224	ENSGT00940000155489.b	ENSGT01000000221284	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00940000162179.f.m.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000164283.a
Abingdon island giant tortoise	MODERN SPECIES	1188	HOXC11 (ENSCABG00000004678) #8	HOXC12 (ENSCABG00000004687) #9	HOXC13 (ENSCABG00000004688) #10	CALCOCO1 (ENSCABG00000004690) #11	ENSCABG00000004691	ENSCABG00000004693 #12	ATF7 (ENSCABG00000004698) #13	ENSCABG00000004755	TARBP2 (ENSCABG00000004756) #15	ENSCABG00000004757	MAP3K12 (ENSCABG00000004759) #16	PCBP2 (ENSCABG00000004763) #17	AMHR2 (ENSCABG00000004771) #19	SP1 (ENSCABG00000004772) #20	SP7 (ENSCABG00000004773) #21	AAAS (ENSCABG00000004775) #22	MYG1 (ENSCABG00000004777) #23	VDR (ENSCABG00000004778)	TMEM106C (ENSCABG00000004784)	COL2A1 (ENSCABG00000004791)	SENP1 (ENSCABG00000004838)	ENSCABG00000005005	PFKM (ENSCABG00000005006)	ASB8 (ENSCABG00000005018)	ENSCABG00000005019	ENSCABG00000005021	PFDN5 (ENSCABG00000005023) #24	ESPL1 (ENSCABG00000005028) #25	MFSD5 (ENSCABG00000005033) #26	ENSCABG00000005034	RARG (ENSCABG00000005035) #28
Goode s thornscrub tortoise	MODERN SPECIES	17	HOXC11 (ENSGEVG00005003936) #8	HOXC12 (ENSGEVG00005003948) #9	HOXC13 (ENSGEVG00005003958) #10	CALCOCO1 (ENSGEVG00005003995) #11	ENSGEVG00005004023 #12	ATF7 (ENSGEVG00005004038) #13	NPFF (ENSGEVG00005004056) #14	TARBP2 (ENSGEVG00005004070) #15	ENSGEVG00005004089	MAP3K12 (ENSGEVG00005004107) #16	PCBP2 (ENSGEVG00005008987) #17	ENSGEVG00005009118	ENSGEVG00005009141	SP1 (ENSGEVG00005009182) #20	SP7 (ENSGEVG00005009213) #21	AAAS (ENSGEVG00005009257) #22	ENSGEVG00005009307	MYG1 (ENSGEVG00005009350) #23	VDR (ENSGEVG00005009445)	TMEM106C (ENSGEVG00005009885)	COL2A1 (ENSGEVG00005009962)	SENP1 (ENSGEVG00005010700)	ENSGEVG00005010778	PFKM (ENSGEVG00005010891)	ASB8 (ENSGEVG00005011375)	ENSGEVG00005011392	ENSGEVG00005011432	ENSGEVG00005011453	PFDN5 (ENSGEVG00005011533) #24	ESPL1 (ENSGEVG00005011575) #25	MFSD5 (ENSGEVG00005011821) #26
Chinese turtle	MODERN SPECIES	2238													PCBP2 (ENSPSIG00000007484) #17	SP1 (ENSPSIG00000007013) #20	SP7 (ENSPSIG00000001445) #21	AAAS (ENSPSIG00000018186) #22	VDR (ENSPSIG00000018108)	TMEM106C (ENSPSIG00000017930)	COL2A1 (ENSPSIG00000014269)	SENP1 (ENSPSIG00000012949)	PFKM (ENSPSIG00000008414)	ASB8 (ENSPSIG00000007270)	ENSPSIG00000006756	PFDN5 (ENSPSIG00000006378) #24	ESPL1 (ENSPSIG00000015544) #25	ENSPSIG00000014806	ENSPSIG00000014799	MFSD5 (ENSPSIG00000014686) #26
Lepidosauria	ANCESTRAL SPECIES	73	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000162804
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00990000209831	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000162804
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000001431	CALCOCO1 (ENSPMRG00000001418) #11	ENSPMRG00000001403	ATF7 (ENSPMRG00000001388) #13	NPFF (ENSPMRG00000001379) #14	TARBP2 (ENSPMRG00000001360) #15	ENSPMRG00000001341	ENSPMRG00000001332	MAP3K12 (ENSPMRG00000001314) #16	PCBP2 (ENSPMRG00000001196) #17	ENSPMRG00000001145	SP1 (ENSPMRG00000001129) #20	ENSPMRG00000001110	ENSPMRG00000001100	SP7 (ENSPMRG00000001076) #21	AAAS (ENSPMRG00000000973) #22	ENSPMRG00000000939	MYG1 (ENSPMRG00000000915) #23	VDR (ENSPMRG00000000898)	ENSPMRG00000000880	ENSPMRG00000000870	ENSPMRG00000000862	ENSPMRG00000000842	TMEM106C (ENSPMRG00000000798)	AGAP2 (ENSPMRG00000000765)	TSPAN31 (ENSPMRG00000000746)	ENSPMRG00000000717	MARCHF9 (ENSPMRG00000000693)	CYP27B1 (ENSPMRG00000000676)	METTL1 (ENSPMRG00000000666)	EEF1AKMT3 (ENSPMRG00000000655)
Argentine black and white tegu	MODERN SPECIES	18	HOXC8 (ENSSMRG00000002576)	HOXC9 (ENSSMRG00000002581)	HOXC10 (ENSSMRG00000002587) #7	HOXC11 (ENSSMRG00000002589) #8	HOXC12 (ENSSMRG00000002593) #9	HOXC13 (ENSSMRG00000002595) #10	CALCOCO1 (ENSSMRG00000002659) #11	ENSSMRG00000002669 #12	ATF7 (ENSSMRG00000002720) #13	TARBP2 (ENSSMRG00000002725) #15	ENSSMRG00000002730	MAP3K12 (ENSSMRG00000002781) #16	ENSSMRG00000003771 #17	SP1 (ENSSMRG00000003831) #20	SP7 (ENSSMRG00000003860) #21	AAAS (ENSSMRG00000003865) #22	ENSSMRG00000003885	MYG1 (ENSSMRG00000003891) #23	VDR (ENSSMRG00000003899)	TMEM106C (ENSSMRG00000003906)	AGAP2 (ENSSMRG00000003925)	TSPAN31 (ENSSMRG00000008366)	CDK4 (ENSSMRG00000008367)	MARCHF9 (ENSSMRG00000008400)	SLC4A8 (ENSSMRG00000008409)	GALNT6 (ENSSMRG00000008495)	ENSSMRG00000008505	BIN2 (ENSSMRG00000008507)	SMAGP (ENSSMRG00000008568)	DAZAP2 (ENSSMRG00000008571)	POU6F1 (ENSSMRG00000008583)
Toxicofera	ANCESTRAL SPECIES	19	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00390000015021 #14	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000155330
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b.c #11	ENSGT00950000183025.b.b.d #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000155330
Indian cobra	MODERN SPECIES	1	HOXC10 (ENSNNAG00000009396) #7	ENSNNAG00000009373 #7	HOXC11 (ENSNNAG00000009350) #8	HOXC12 (ENSNNAG00000009339) #9	HOXC13 (ENSNNAG00000009275) #10	ENSNNAG00000009259 #11	ENSNNAG00000009241 #12	ATF7 (ENSNNAG00000009169) #13	ENSNNAG00000009151	TARBP2 (ENSNNAG00000009069) #15	ENSNNAG00000009038	MAP3K12 (ENSNNAG00000008985) #16	PCBP2 (ENSNNAG00000008863) #17	SP1 (ENSNNAG00000008815) #20	SP7 (ENSNNAG00000008790) #21	AAAS (ENSNNAG00000008624) #22	ENSNNAG00000008588	MYG1 (ENSNNAG00000008552) #23	VDR (ENSNNAG00000008474)	TMEM106C (ENSNNAG00000008329)	AGAP2 (ENSNNAG00000007813)	TSPAN31 (ENSNNAG00000007737)	CDK4 (ENSNNAG00000007706)	MARCHF9 (ENSNNAG00000007575)	CYP27B1 (ENSNNAG00000007139)	METTL1 (ENSNNAG00000007055)	EEF1AKMT3 (ENSNNAG00000007036)	TSFM (ENSNNAG00000007025)	AVIL (ENSNNAG00000006865)	ENSNNAG00000012488	CTDSP2 (ENSNNAG00000012418)
Elapidae_a	ANCESTRAL SPECIES	54	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b.c #11	ENSGT00950000183025.b.b.d #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000155330
Acanthophiinae	ANCESTRAL SPECIES	53	ENSGT00940000160866	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b.c #11	ENSGT00950000183025.b.b.d #11	ENSGT00940000157981.b #12	ENSGT00940000155261 #13	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00940000154360.A.a	ENSGT00390000010265 #23	ENSGT00940000155473	ENSGT00940000161281	ENSGT00940000158956	ENSGT00940000160351	ENSGT00940000154770	ENSGT00940000158208	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000159587	ENSGT01040000240451.a.b.a	ENSGT00940000155330
Eastern brown snake	MODERN SPECIES	72	HOXC9 (ENSPTXG00000007226)	HOXC10 (ENSPTXG00000007224) #7	HOXC11 (ENSPTXG00000007223) #8	HOXC12 (ENSPTXG00000007222) #9	HOXC13 (ENSPTXG00000007221) #10	CALCOCO1 (ENSPTXG00000007220) #11	ENSPTXG00000007219 #12	ATF7 (ENSPTXG00000007218) #13	TARBP2 (ENSPTXG00000007217) #15	ENSPTXG00000007216	MAP3K12 (ENSPTXG00000007215) #16	PCBP2 (ENSPTXG00000007214) #17	AMHR2 (ENSPTXG00000007213) #19	SP1 (ENSPTXG00000007212) #20	SP7 (ENSPTXG00000007211) #21	AAAS (ENSPTXG00000007209) #22	ENSPTXG00000007207	MYG1 (ENSPTXG00000007206) #23	VDR (ENSPTXG00000007205)	TMEM106C (ENSPTXG00000007204)	AGAP2 (ENSPTXG00000007142)	TSPAN31 (ENSPTXG00000007141)	CDK4 (ENSPTXG00000007140)	MARCHF9 (ENSPTXG00000007139)	CYP27B1 (ENSPTXG00000007013)	METTL1 (ENSPTXG00000007012)	EEF1AKMT3 (ENSPTXG00000007011)	TSFM (ENSPTXG00000007010)	AVIL (ENSPTXG00000006976)	CTDSP2 (ENSPTXG00000006974)	SLC11A2 (ENSPTXG00000006972)
Mainland tiger snake	MODERN SPECIES	90	ENSNSUG00000002978	HOXC10 (ENSNSUG00000002979) #7	HOXC11 (ENSNSUG00000002980) #8	HOXC12 (ENSNSUG00000002981) #9	HOXC13 (ENSNSUG00000002982) #10	ENSNSUG00000002983 #11	ENSNSUG00000002984 #11	ENSNSUG00000002985 #12	ATF7 (ENSNSUG00000002987) #13	TARBP2 (ENSNSUG00000003015) #15	ENSNSUG00000003019	MAP3K12 (ENSNSUG00000003022) #16	PCBP2 (ENSNSUG00000003025) #17	SP1 (ENSNSUG00000003037) #20	SP7 (ENSNSUG00000003038) #21	AAAS (ENSNSUG00000003042) #22	MYG1 (ENSNSUG00000003053) #23	VDR (ENSNSUG00000003057)	TMEM106C (ENSNSUG00000003116)	AGAP2 (ENSNSUG00000003119)	TSPAN31 (ENSNSUG00000003179)	CDK4 (ENSNSUG00000003180)	MARCHF9 (ENSNSUG00000003181)	CYP27B1 (ENSNSUG00000003183)	METTL1 (ENSNSUG00000003465)	EEF1AKMT3 (ENSNSUG00000003482)	TSFM (ENSNSUG00000003486)	AVIL (ENSNSUG00000003491)	CTDSP2 (ENSNSUG00000003501)	ENSNSUG00000003503	SLC11A2 (ENSNSUG00000003504)
Blue-lipped sea krait	MODERN SPECIES	1695																AAAS (ENSLLTG00000012774) #22	ENSLLTG00000012797
Lizard	MODERN SPECIES	1148																ENSACAG00000005367 #22	ENSACAG00000005466	ENSACAG00000005470 #23	ENSACAG00000043843 #24	ASB8 (ENSACAG00000005535)	PFKM (ENSACAG00000005562)	SENP1 (ENSACAG00000005981)	ENSACAG00000026660	COL2A1 (ENSACAG00000006064)	ENSACAG00000006384
tuatara	MODERN SPECIES	497							CALCOCO1 (ENSSPUG00000005381) #11	ENSSPUG00000005824	ATF7 (ENSSPUG00000005836) #13	NPFF (ENSSPUG00000005876) #14	TARBP2 (ENSSPUG00000005895) #15	ENSSPUG00000005915	ENSSPUG00000005922	PCBP2 (ENSSPUG00000006081) #17	SP1 (ENSSPUG00000006229) #20	AAAS (ENSSPUG00000006283) #22	MYG1 (ENSSPUG00000006303) #23	VDR (ENSSPUG00000006324)	TMEM106C (ENSSPUG00000006362)	COL2A1 (ENSSPUG00000006388)
Anura	ANCESTRAL SPECIES	3	ENSGT00940000160855 #7	ENSGT00940000160009 #8	ENSGT00940000161307 #9	ENSGT00940000161087 #10	ENSGT00950000183025.b.b #11	ENSGT00940000157981.a.a ##12	ENSGT00940000155261 #13	ENSGT00980000202663	ENSGT00940000157748 #15	ENSGT00940000159006 #16	ENSGT00940000154129 #17	ENSGT00940000160885 #19	ENSGT00940000167008	ENSGT00940000157804 #20	ENSGT00940000161293 #21	ENSGT00390000009446 #22	ENSGT00390000010265 #23	ENSGT00390000008783 #24	ENSGT00390000004990 #25	ENSGT00390000012629 #26	ENSGT00940000156458 #28	ENSGT01090000259987.a.a.b #29	ENSGT00940000159609 #30	ENSGT00940000158240 #31	ENSGT00950000183081.a.a.b #33	ENSGT00940000158675 #35	ENSGT00940000163886.B.a	ENSGT00940000162738.a.a	ENSGT00940000155862.a.b.a.b.a	ENSGT00940000162738.b	ENSGT00940000161279
Frog	MODERN SPECIES	2	calcoco1 (ENSXETG00000031742) #11	ENSXETG00000045047	atp5mc1 (ENSXETG00000016655) ##12	atf7 (ENSXETG00000012641) #13	ENSXETG00000035352	tarbp2 (ENSXETG00000012644) #15	ENSXETG00000043101	map3k12 (ENSXETG00000012650) #16	pcbp3 (ENSXETG00000012658) #17	ENSXETG00000040320	ENSXETG00000044113 #19	XB5882685 [provisional:cdca7] (ENSXETG00000033674)	sp1 (ENSXETG00000012660) #20	ENSXETG00000043353	sp7 (ENSXETG00000040410) #21	aaas (ENSXETG00000012664) #22	myg1 (ENSXETG00000012666) #23	espl1 (ENSXETG00000012668) #25	mfsd5 (ENSXETG00000012669) #26	rarg (ENSXETG00000012670) #28	itgb7 (ENSXETG00000012671) #29	znf740 (ENSXETG00000025177) #30	csad (ENSXETG00000012672) #31	soat2 (ENSXETG00000001821) #33	spryd3 (ENSXETG00000001822) #35	tns2 (ENSXETG00000001823)	eif4b (ENSXETG00000001829)	krt18.1 (ENSXETG00000020455)	ENSXETG00000035663	krt8.1 (ENSXETG00000020454)	krt78.6 (ENSXETG00000024586)
Leishan spiny toad	MODERN SPECIES	5	CALCOCO1 (ENSLLEG00000005659) #11	ENSLLEG00000005727	ENSLLEG00000005743 ##12	ATF7 (ENSLLEG00000005791) #13	TARBP2 (ENSLLEG00000005916) #15	ENSLLEG00000006056	ENSLLEG00000006071	ENSLLEG00000006113	MAP3K12 (ENSLLEG00000006123) #16	ENSLLEG00000006183	PCBP2 (ENSLLEG00000006209) #17	SP1 (ENSLLEG00000006385) #20	AMHR2 (ENSLLEG00000006451) #19	ENSLLEG00000006654	SP7 (ENSLLEG00000006852) #21	AAAS (ENSLLEG00000006896) #22	ENSLLEG00000007190 #23	PFDN5 (ENSLLEG00000007234) #24	ESPL1 (ENSLLEG00000007332) #25	ENSLLEG00000007762	MFSD5 (ENSLLEG00000007773) #26	ENSLLEG00000007786	ENSLLEG00000007797	RARG (ENSLLEG00000007835) #28	ENSLLEG00000007994	ITGB7 (ENSLLEG00000007999) #29	ZNF740 (ENSLLEG00000008065) #30	CSAD (ENSLLEG00000008098) #31	ENSLLEG00000008241	SOAT2 (ENSLLEG00000008275) #33	SPRYD3 (ENSLLEG00000008829) #35