Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00390000002550 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000154367.b ##21 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00390000002550 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000153424.a.b Glires ANCESTRAL SPECIES 9 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000153424.a.b ENSGT00390000001195.a Rodentia ANCESTRAL SPECIES 9 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 Myomorpha ANCESTRAL SPECIES 60 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 Muroidea ANCESTRAL SPECIES 72 ENSGT00950000183043.a.b.b.a.b ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b ENSGT00940000153321.b.b.l.b.a ENSGT00940000153424.a.b ENSGT00390000001195.a Muroidea_A ANCESTRAL SPECIES 14 ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b Murinae ANCESTRAL SPECIES 21 ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b Rat MODERN SPECIES 8 Or9s18 (ENSRNOG00000067756) #10 Or14p1 (ENSRNOG00000018489) #11 Mfsd14b (ENSRNOG00000018227) #12 Prss47 (ENSRNOG00000031461) #13 Spata31d1c (ENSRNOG00000040116) #14 Spata31a5 (ENSRNOG00000018202) #15 Cntnap3 (ENSRNOG00000027309) #16 AABR07026805.2 (ENSRNOG00000040101) #17 Fam240b (ENSRNOG00000050209) #18 Cdk20 (ENSRNOG00000017991) #19 AABR07026797.1 (ENSRNOG00000018554) #20 Ctsl (ENSRNOG00000018566) #21 Prxl2c (ENSRNOG00000018886) #22 Cdc14b (ENSRNOG00000018999) #23 Habp4 (ENSRNOG00000019027) #24 Zfp367 (ENSRNOG00000027234) #25 Slc35d2 (ENSRNOG00000027229) #26 Hsd17b3 (ENSRNOG00000019096) #27 Ercc6l2 (ENSRNOG00000019175) #28 Ptch1 (ENSRNOG00000019354) #29 Fancc (ENSRNOG00000016889) #30 Aopep (ENSRNOG00000017505) #31 ENSRNOG00000063737 #32 Fbp1 (ENSRNOG00000017597) #33 Fbp2 (ENSRNOG00000017637) #34 ENSRNOG00000065205 #35 ENSRNOG00000063205 #36 ENSRNOG00000068622 #37 Mus ANCESTRAL SPECIES 18 ENSGT00530000063576.B ENSGT00390000005801 ENSGT00390000012916.t ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.a.a Mus_A ANCESTRAL SPECIES 14 ENSGT00940000155274.a.b.c.b ENSGT00530000063576.B ENSGT00390000005801 ENSGT00390000012916.t ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.a.a Ryukyu mouse MODERN SPECIES 4 Zfp712 (MGP_CAROLIEiJ_G0018656) Ptdss1 (MGP_CAROLIEiJ_G0018655) Mterf3 (MGP_CAROLIEiJ_G0018654) Uqcrb (MGP_CAROLIEiJ_G0018653) Nlrp4f (MGP_CAROLIEiJ_G0018652) Or9s18 (MGP_CAROLIEiJ_G0018651) #10 Or14p1 (MGP_CAROLIEiJ_G0018650) #11 Mfsd14b (MGP_CAROLIEiJ_G0018649) #12 Prss47 (MGP_CAROLIEiJ_G0018648) #13 Spata31d1c (MGP_CAROLIEiJ_G0018647) ##15 Spata31 (MGP_CAROLIEiJ_G0018646) #15 Cntnap3 (MGP_CAROLIEiJ_G0018645) #16 Fam240b (MGP_CAROLIEiJ_G0018644) #18 Cdk20 (MGP_CAROLIEiJ_G0018643) #19 Ctsl (MGP_CAROLIEiJ_G0018642) Prxl2c (MGP_CAROLIEiJ_G0018641) #22 Cdc14b (MGP_CAROLIEiJ_G0018640) #23 Habp4 (MGP_CAROLIEiJ_G0018639) #24 Zfp367 (MGP_CAROLIEiJ_G0018638) #25 Slc35d2 (MGP_CAROLIEiJ_G0018637) #26 Hsd17b3 (MGP_CAROLIEiJ_G0018636) #27 MGP_CAROLIEiJ_G0018635 #28 Ptch1 (MGP_CAROLIEiJ_G0018634) #29 Fancc (MGP_CAROLIEiJ_G0018633) #30 Aopep (MGP_CAROLIEiJ_G0018632) #31 Fbp1 (MGP_CAROLIEiJ_G0018631) #33 Fbp2 (MGP_CAROLIEiJ_G0018630) #34 MGP_CAROLIEiJ_G0018629 Ctsm (MGP_CAROLIEiJ_G0018628) Cts7 (MGP_CAROLIEiJ_G0018627) Cts8 (MGP_CAROLIEiJ_G0018626) Mus_B ANCESTRAL SPECIES 13 ENSGT00390000011190.y.a ENSGT00390000012916.t ENSGT00940000162111.d ENSGT00860000136162 ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.a.a Mouse MODERN SPECIES 4 Zfp997 (ENSMUSG00000095909) ##36 Gm10139 (ENSMUSG00000063905) ##36 Zfp369 (ENSMUSG00000021514) Gm10775 (ENSMUSG00000074847) Nlrp4f (ENSMUSG00000032999) Or9s18 (ENSMUSG00000049806) #10 Or14p1 (ENSMUSG00000108426) #11 Mfsd14b (ENSMUSG00000038212) #12 Prss47 (ENSMUSG00000090658) #13 Spata31d1c (ENSMUSG00000074849) ##15 Spata31 (ENSMUSG00000056223) #15 Cntnap3 (ENSMUSG00000033063) #16 Fam240b (ENSMUSG00000096537) #18 Cdk20 (ENSMUSG00000021483) #19 Ctsl (ENSMUSG00000021477) Prxl2c (ENSMUSG00000021482) #22 Cdc14b (ENSMUSG00000033102) #23 Habp4 (ENSMUSG00000021476) #24 Zfp367 (ENSMUSG00000044934) #25 Slc35d2 (ENSMUSG00000033114) #26 Hsd17b3 (ENSMUSG00000033122) #27 Ercc6l2 (ENSMUSG00000021470) #28 Ptch1 (ENSMUSG00000021466) #29 Fancc (ENSMUSG00000021461) #30 Aopep (ENSMUSG00000021458) #31 Fbp1 (ENSMUSG00000069805) #33 Fbp2 (ENSMUSG00000021456) #34 Gm5141 (ENSMUSG00000091183) #36 Platr25 (ENSMUSG00000074863) #36 6720489N17Rik (ENSMUSG00000072066) ##36 Zfp934 (ENSMUSG00000074865) #36 Mus_C ANCESTRAL SPECIES 10 ENSGT00390000011190.y.a ENSGT00390000012916.t ENSGT00940000162111.d ENSGT00860000136162 ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.a.a Steppe mouse MODERN SPECIES 3039 Or9s18 (ENSMSIG00000021783) #10 Or14p1 (ENSMSIG00000021778) #11 ENSMSIG00000021775 Mfsd14b (ENSMSIG00000021759) #12 ENSMSIG00000021748 #13 Spata31d1c (ENSMSIG00000021735) ##15 ENSMSIG00000021729 Spata31 (ENSMSIG00000021723) #15 ENSMSIG00000021707 Cntnap3 (ENSMSIG00000021683) #16 ENSMSIG00000021657 ENSMSIG00000021654 Fam240b (ENSMSIG00000021651) #18 Cdk20 (ENSMSIG00000021605) #19 Ctsl (ENSMSIG00000021593) Prxl2c (ENSMSIG00000021569) #22 ENSMSIG00000021554 Cdc14b (ENSMSIG00000021401) #23 Habp4 (ENSMSIG00000021366) #24 Zfp367 (ENSMSIG00000021336) #25 Slc35d2 (ENSMSIG00000021264) #26 Hsd17b3 (ENSMSIG00000021249) #27 ENSMSIG00000021243 Ercc6l2 (ENSMSIG00000021038) #28 Ptch1 (ENSMSIG00000020849) #29 spretus MODERN SPECIES 4 Mterf3 (MGP_SPRETEiJ_G0019536) Gm10767 (MGP_SPRETEiJ_G0019535) Uqcrb (MGP_SPRETEiJ_G0019534) MGP_SPRETEiJ_G0019533 Gm10775 (MGP_SPRETEiJ_G0019532) Or9s18 (MGP_SPRETEiJ_G0019531) #10 Or14p1 (MGP_SPRETEiJ_G0019530) #11 Mfsd14b (MGP_SPRETEiJ_G0019529) #12 Prss47 (MGP_SPRETEiJ_G0019528) #13 Spata31d1c (MGP_SPRETEiJ_G0019527) ##15 Spata31 (MGP_SPRETEiJ_G0019526) #15 Cntnap3 (MGP_SPRETEiJ_G0019525) #16 Fam240b (MGP_SPRETEiJ_G0019524) #18 Cdk20 (MGP_SPRETEiJ_G0019523) #19 Ctsl (MGP_SPRETEiJ_G0019522) Prxl2c (MGP_SPRETEiJ_G0019521) #22 Cdc14b (MGP_SPRETEiJ_G0019520) #23 Habp4 (MGP_SPRETEiJ_G0019519) #24 Zfp367 (MGP_SPRETEiJ_G0019518) #25 Slc35d2 (MGP_SPRETEiJ_G0019517) #26 Hsd17b3 (MGP_SPRETEiJ_G0019516) #27 MGP_SPRETEiJ_G0019515 #28 Ptch1 (MGP_SPRETEiJ_G0019514) #29 Fancc (MGP_SPRETEiJ_G0019513) #30 Aopep (MGP_SPRETEiJ_G0019512) #31 Fbp1 (MGP_SPRETEiJ_G0019511) #33 Fbp2 (MGP_SPRETEiJ_G0019510) #34 MGP_SPRETEiJ_G0019509 Ctsm (MGP_SPRETEiJ_G0019508) Cts7 (MGP_SPRETEiJ_G0019507) Cts8 (MGP_SPRETEiJ_G0019506) Shrew mouse MODERN SPECIES 7 Ptdss1 (MGP_PahariEiJ_G0019720) Mterf3 (MGP_PahariEiJ_G0019719) Uqcrb (MGP_PahariEiJ_G0019718) MGP_PahariEiJ_G0019717 Nlrp4f (MGP_PahariEiJ_G0019716) Or9s18 (MGP_PahariEiJ_G0019715) #10 Or14p1 (MGP_PahariEiJ_G0019714) #11 Mfsd14b (MGP_PahariEiJ_G0019713) #12 Prss47 (MGP_PahariEiJ_G0019712) #13 Spata31d1c (MGP_PahariEiJ_G0019711) ##15 Spata31 (MGP_PahariEiJ_G0019710) #15 Cntnap3 (MGP_PahariEiJ_G0019709) #16 Fam240b (MGP_PahariEiJ_G0019708) #18 Cdk20 (MGP_PahariEiJ_G0019707) #19 MGP_PahariEiJ_G0019706 #21 Prxl2c (MGP_PahariEiJ_G0019705) #22 Cdc14b (MGP_PahariEiJ_G0019704) #23 Habp4 (MGP_PahariEiJ_G0019703) #24 Zfp367 (MGP_PahariEiJ_G0019702) #25 Slc35d2 (MGP_PahariEiJ_G0019701) #26 Hsd17b3 (MGP_PahariEiJ_G0019700) #27 MGP_PahariEiJ_G0019699 #28 Ptch1 (MGP_PahariEiJ_G0019698) #29 Fancc (MGP_PahariEiJ_G0019697) #30 Aopep (MGP_PahariEiJ_G0019696) #31 Fbp1 (MGP_PahariEiJ_G0019695) #33 Fbp2 (MGP_PahariEiJ_G0019694) #34 MGP_PahariEiJ_G0019693 MGP_PahariEiJ_G0019692 Cts7 (MGP_PahariEiJ_G0019691) Cts8 (MGP_PahariEiJ_G0019690) Cricetidae ANCESTRAL SPECIES 22 ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b Cricetidae_B ANCESTRAL SPECIES 22 ENSGT01100000263494.a.a.a.a.b.b #10 ENSGT01050000244828.c.b.b.b.c.b #11 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b Northern American deer mouse MODERN SPECIES 18 Or9s18 (ENSPEMG00000006716) #10 Or14p1 (ENSPEMG00000000696) #11 Mfsd14b (ENSPEMG00000006359) #12 Prss47 (ENSPEMG00000024096) #13 ENSPEMG00000009179 ##15 ENSPEMG00000025407 Fam240b (ENSPEMG00000020614) #18 Cdk20 (ENSPEMG00000023165) #19 Ctsl (ENSPEMG00000021285) ENSPEMG00000021037 Prxl2c (ENSPEMG00000020672) #22 Cdc14b (ENSPEMG00000020534) #23 ENSPEMG00000021224 #24 Zfp367 (ENSPEMG00000013770) #25 Slc35d2 (ENSPEMG00000021173) #26 Hsd17b3 (ENSPEMG00000021000) #27 ENSPEMG00000006631 #28 Ptch1 (ENSPEMG00000016117) #29 Fancc (ENSPEMG00000022299) #30 Aopep (ENSPEMG00000011169) #31 Fbp1 (ENSPEMG00000020415) #33 Fbp2 (ENSPEMG00000003200) #34 ENSPEMG00000020678 ENSPEMG00000030384 ENSPEMG00000027810 Cts8 (ENSPEMG00000021957) Prairie vole MODERN SPECIES 201 ENSMOCG00000000793 ##36 Mfsd14b (ENSMOCG00000000124) #12 Prss47 (ENSMOCG00000013963) #13 Spata31 (ENSMOCG00000002879) #15 Fam240b (ENSMOCG00000009158) #18 Cdk20 (ENSMOCG00000000538) #19 ENSMOCG00000012435 #21 Prxl2c (ENSMOCG00000001857) #22 Cdc14b (ENSMOCG00000011367) #23 Habp4 (ENSMOCG00000015678) #24 Zfp367 (ENSMOCG00000005924) #25 Slc35d2 (ENSMOCG00000017626) #26 Hsd17b3 (ENSMOCG00000014078) #27 Ercc6l2 (ENSMOCG00000019362) #28 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000156081 #12 ENSGT00940000157345.a #13 ENSGT00950000183043.a.b.b.a.b.u.a.a ##15 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000159128 #19 ENSGT00940000153321.b.b.l.a ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.b.a.b Golden Hamster MODERN SPECIES 699 Mfsd14b (ENSMAUG00000001438) #12 Prss47 (ENSMAUG00000001035) #13 Spata31d1c (ENSMAUG00000020041) ##15 Spata31 (ENSMAUG00000018558) #15 Cntnap3 (ENSMAUG00000002315) #16 Fam240b (ENSMAUG00000003441) #18 Cdk20 (ENSMAUG00000001239) #19 Ctsv (ENSMAUG00000000661) #21 Prxl2c (ENSMAUG00000007262) #22 Cdc14b (ENSMAUG00000002176) #23 Habp4 (ENSMAUG00000020977) #24 Zfp367 (ENSMAUG00000019699) #25 Slc35d2 (ENSMAUG00000016504) #26 Hsd17b3 (ENSMAUG00000018759) #27 Ercc6l2 (ENSMAUG00000004820) #28 Ptch1 (ENSMAUG00000014816) #29 Fancc (ENSMAUG00000012407) #30 Aopep (ENSMAUG00000003279) #31 Fbp1 (ENSMAUG00000015819) #33 Fbp2 (ENSMAUG00000017596) #34 ENSMAUG00000016362 Cts8 (ENSMAUG00000018878) Ctsr (ENSMAUG00000014961) Cts6 (ENSMAUG00000016662) Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001012071 #10 ENSCGRG00001024215 ENSCGRG00001003953 #10 Mfsd14b (ENSCGRG00001016271) #12 Prss47 (ENSCGRG00001011133) #13 ENSCGRG00001000347 #14 Spata31 (ENSCGRG00001024965) #15 Cntnap3 (ENSCGRG00001012388) #16 Fam240b (ENSCGRG00001020040) #18 Cdk20 (ENSCGRG00001001834) #19 Ctsl (ENSCGRG00001023416) Prxl2c (ENSCGRG00001003859) #22 ENSCGRG00001002667 Cdc14b (ENSCGRG00001019066) #23 Habp4 (ENSCGRG00001025040) #24 Zfp367 (ENSCGRG00001022531) #25 Slc35d2 (ENSCGRG00001020192) #26 Hsd17b3 (ENSCGRG00001009870) #27 ENSCGRG00001022738 #28 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) #29 Fancc (ENSCGRG00001013491) #30 Aopep (ENSCGRG00001012713) #31 Fbp1 (ENSCGRG00001009150) #33 Fbp2 (ENSCGRG00001022515) #34 Cts8 (ENSCGRG00001013704) Cts6 (ENSCGRG00001022925) Upper Galilee mountains blind mole rat MODERN SPECIES 1726 ENSNGAG00000016381 #21 Prxl2c (ENSNGAG00000018224) #22 Cdc14b (ENSNGAG00000007537) #23 Habp4 (ENSNGAG00000011671) #24 Zfp367 (ENSNGAG00000012049) #25 Slc35d2 (ENSNGAG00000013360) #26 Hsd17b3 (ENSNGAG00000015712) #27 ENSNGAG00000016174 #28 Ptch1 (ENSNGAG00000006843) #29 ENSNGAG00000000772 #30 ENSNGAG00000001462 #31 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 163 Zfp185 (ENSJJAG00000014731) Nsdhl (ENSJJAG00000000243) Cetn2 (ENSJJAG00000013760) Gabrq (ENSJJAG00000022087) Gabra3 (ENSJJAG00000001310) Cnga2 (ENSJJAG00000013042) Fate1 (ENSJJAG00000015245) Prrg3 (ENSJJAG00000015583) Vma21 (ENSJJAG00000020071) Gpr50 (ENSJJAG00000020668) ENSJJAG00000021123 Cd99l2 (ENSJJAG00000006249) ENSJJAG00000012519 #22 Mtmr1 (ENSJJAG00000018376) Mtm1 (ENSJJAG00000020995) Mamld1 (ENSJJAG00000003438) Tmem185a (ENSJJAG00000011818) Ids (ENSJJAG00000013271) Aff2 (ENSJJAG00000022176) ENSJJAG00000019383 ENSJJAG00000014630 Lesser Egyptian jerboa MODERN SPECIES 176 ENSJJAG00000017463 ENSJJAG00000017952 Hdc (ENSJJAG00000021664) Slc27a2 (ENSJJAG00000012884) ENSJJAG00000014259 Atp8b4 (ENSJJAG00000017268) ENSJJAG00000013820 ENSJJAG00000020065 Dtwd1 (ENSJJAG00000007677) ENSJJAG00000018025 ENSJJAG00000018894 Fgf7 (ENSJJAG00000010425) Galk2 (ENSJJAG00000010967) ENSJJAG00000011328 ENSJJAG00000011858 ENSJJAG00000012276 #22 Cops2 (ENSJJAG00000012737) Secisbp2l (ENSJJAG00000014644) ENSJJAG00000017576 Shc4 (ENSJJAG00000021146) Eid1 (ENSJJAG00000022180) Fbn1 (ENSJJAG00000018173) Slc12a1 (ENSJJAG00000009847) Ctxn2 (ENSJJAG00000013770) ENSJJAG00000015428 Slc24a5 (ENSJJAG00000017458) ENSJJAG00000013797 Lesser Egyptian jerboa MODERN SPECIES 60 ENSJJAG00000000714 ENSJJAG00000021508 Vapa (ENSJJAG00000015092) Rab31 (ENSJJAG00000000852) Ppp4r1 (ENSJJAG00000010207) Ralbp1 (ENSJJAG00000017102) Twsg1 (ENSJJAG00000017095) Ankrd12 (ENSJJAG00000020013) Ndufv2 (ENSJJAG00000016857) Ddx11 (ENSJJAG00000018162) ENSJJAG00000018543 ENSJJAG00000022665 Cntnap3 (ENSJJAG00000006453) #16 Fam240b (ENSJJAG00000019963) #18 ENSJJAG00000011401 #21 ENSJJAG00000024373 #22 Cdc14b (ENSJJAG00000002103) #23 Habp4 (ENSJJAG00000015599) #24 Zfp367 (ENSJJAG00000006992) #25 Slc35d2 (ENSJJAG00000011235) #26 Hsd17b3 (ENSJJAG00000001953) #27 ENSJJAG00000018150 #28 Ptch1 (ENSJJAG00000016228) #29 Fancc (ENSJJAG00000001579) #30 Aopep (ENSJJAG00000015878) #31 Fbp1 (ENSJJAG00000010371) #33 Fbp2 (ENSJJAG00000022384) #34 ENSJJAG00000023768 ENSJJAG00000005732 Mfsd14b (ENSJJAG00000019365) #12 ENSJJAG00000002085 Kangaroo rat MODERN SPECIES 359 Prxl2c (ENSDORG00000001634) #22 Cdc14b (ENSDORG00000005998) #23 Rasef (ENSDORG00000015570) ENSDORG00000026939 ENSDORG00000025974 ENSDORG00000026113 Tle4 (ENSDORG00000008552) Psat1 (ENSDORG00000016698) ENSDORG00000013680 Gna14 (ENSDORG00000028684) Vps13a (ENSDORG00000014372) ENSDORG00000016172 ENSDORG00000028786 Gcnt1 (ENSDORG00000024110) Rfk (ENSDORG00000028987) ENSDORG00000004033 Rodentia_A ANCESTRAL SPECIES 30 ENSGT00390000011897 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154367.b.d ##21 Sciuridae ANCESTRAL SPECIES 48 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154367.b.d ##21 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 4 ENSSVLG00005008505 ENSSVLG00005008478 ENSSVLG00005008454 ENSSVLG00005008425 ENSSVLG00005008387 ENSSVLG00005008350 #15 ENSSVLG00005008320 ENSSVLG00005008296 CTSV (ENSSVLG00005008235) #21 ENSSVLG00005008172 ENSSVLG00005008143 ENSSVLG00005008130 ZNF782 (ENSSVLG00005008114) ENSSVLG00005008085 ZNF510 (ENSSVLG00005008057) ENSSVLG00005008017 #22 ENSSVLG00005007732 #23 HABP4 (ENSSVLG00005007550) #24 ZNF367 (ENSSVLG00005007498) #25 SLC35D2 (ENSSVLG00005007372) #26 HSD17B3 (ENSSVLG00005007249) #27 ERCC6L2 (ENSSVLG00005007060) PTCH1 (ENSSVLG00005006529) #29 ENSSVLG00005006388 FANCC (ENSSVLG00005006217) #30 AOPEP (ENSSVLG00005005936) #31 FBP1 (ENSSVLG00005005878) #33 FBP2 (ENSSVLG00005005833) #34 ENSSVLG00005005478 ##21 ENSSVLG00005005381 MC2R (ENSSVLG00005005361) Eurasian red squirrel MODERN SPECIES 1 ENSSVLG00005013423 ENSSVLG00005013345 ENSSVLG00005013290 ENSSVLG00005013214 NSUN3 (ENSSVLG00005013136) ENSSVLG00005013029 ARL13B (ENSSVLG00005012937) PROS1 (ENSSVLG00005012814) ENSSVLG00005012746 EPHA3 (ENSSVLG00005012314) ENSSVLG00005012271 ENSSVLG00005012217 ZNF654 (ENSSVLG00005012126) ENSSVLG00005012096 HTR1F (ENSSVLG00005012072) ENSSVLG00005012054 #22 POU1F1 (ENSSVLG00005011862) ENSSVLG00005011686 VGLL3 (ENSSVLG00005011630) CADM2 (ENSSVLG00005011324) ENSSVLG00005019667 ENSSVLG00005019648 GBE1 (ENSSVLG00005019519) ENSSVLG00005019248 ROBO1 (ENSSVLG00005018820) ENSSVLG00005018748 ENSSVLG00005018707 ROBO2 (ENSSVLG00005018151) ENSSVLG00005018057 LIPI (ENSSVLG00005017807) RBM11 (ENSSVLG00005017683) Marmotini ANCESTRAL SPECIES 67 ENSGT00390000011897 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000153321.b.b.l.a ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 Marmotini_b ANCESTRAL SPECIES 154 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000163284 ENSGT00940000156081 #12 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 Arctic ground squirrel MODERN SPECIES 770 ZNF782 (ENSUPAG00010003510) ZNF510 (ENSUPAG00010003515) PRXL2C (ENSUPAG00010003522) #22 ENSUPAG00010003529 #23 HABP4 (ENSUPAG00010003633) #24 ZNF367 (ENSUPAG00010003641) #25 SLC35D2 (ENSUPAG00010003656) #26 Squirrel MODERN SPECIES 87 OMD (ENSSTOG00000015221) OGN (ENSSTOG00000021933) CENPP (ENSSTOG00000030603) NOL8 (ENSSTOG00000015195) IARS1 (ENSSTOG00000015173) ZNF484 (ENSSTOG00000030040) ENSSTOG00000033485 MFSD14B (ENSSTOG00000013898) #12 ENSSTOG00000034953 ZNF658 (ENSSTOG00000030701) ENSSTOG00000004899 #16 FAM240B (ENSSTOG00000031821) #18 ENSSTOG00000033524 CTSV (ENSSTOG00000007841) #21 ZNF782 (ENSSTOG00000031527) PRXL2C (ENSSTOG00000021859) #22 ENSSTOG00000028527 #23 ENSSTOG00000025805 #24 ZNF367 (ENSSTOG00000005655) #25 SLC35D2 (ENSSTOG00000005639) #26 HSD17B3 (ENSSTOG00000004893) #27 Alpin marmot MODERN SPECIES 89 SEMA4D (ENSMMMG00000021970) ENSMMMG00000021973 SECISBP2 (ENSMMMG00000021975) CKS2 (ENSMMMG00000021980) SHC3 (ENSMMMG00000021983) S1PR3 (ENSMMMG00000021989) SPIN1 (ENSMMMG00000021994) ENSMMMG00000022012 #19 ENSMMMG00000022016 ENSMMMG00000022029 #13 ENSMMMG00000022032 CTSV (ENSMMMG00000022033) #21 ENSMMMG00000022038 ZNF782 (ENSMMMG00000022039) ZNF510 (ENSMMMG00000022042) PRXL2C (ENSMMMG00000022044) #22 ENSMMMG00000002227 #23 ENSMMMG00000002250 #24 SLC35D2 (ENSMMMG00000002267) #26 HSD17B3 (ENSMMMG00000002462) #27 ENSMMMG00000002531 #28 PTCH1 (ENSMMMG00000002556) #29 FANCC (ENSMMMG00000002674) #30 AOPEP (ENSMMMG00000002776) #31 FBP1 (ENSMMMG00000002815) #33 FBP2 (ENSMMMG00000002826) #34 ENSMMMG00000002840 MC2R (ENSMMMG00000002896) MC5R (ENSMMMG00000002904) Hystricomorpha ANCESTRAL SPECIES 16 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154853.c ENSGT00940000154853.d ENSGT00940000158566 ENSGT00940000157482.d Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000012322 FBP1 (ENSHGLG00000050880) #33 ENSHGLG00000045615 ENSHGLG00000012042 #31 ENSHGLG00000044815 #31 FANCC (ENSHGLG00000013830) #30 ENSHGLG00000005827 ENSHGLG00000039274 ENSHGLG00000009673 #29 ENSHGLG00000032934 ENSHGLG00000009488 ENSHGLG00000009668 ENSHGLG00000047769 ENSHGLG00000016253 #27 ENSHGLG00000045218 ENSHGLG00000016555 #22 ENSHGLG00000016044 #23 ENSHGLG00000041746 #24 ENSHGLG00000021000 ENSHGLG00000043295 ENSHGLG00000039205 ENSHGLG00000017371 #25 ENSHGLG00000049299 ENSHGLG00000042791 ENSHGLG00000015021 ENSHGLG00000016807 ENSHGLG00000044728 ZNF451 (ENSHGLG00000018721) ENSHGLG00000018722 RAB23 (ENSHGLG00000013030) ENSHGLG00000033625 Hystricomorpha_a ANCESTRAL SPECIES 12 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000162955 ENSGT00940000159128 #19 ENSGT00940000157345.a #13 ENSGT00530000069333.a #18 ENSGT00940000160228 #16 ENSGT00940000153505.a.a.c.b ENSGT00940000156081 #12 ENSGT00940000163284 ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154853.c ENSGT00940000154853.d ENSGT00940000158566 ENSGT00940000157482.d Hystricomorpha_b ANCESTRAL SPECIES 10 ENSGT00940000153505.a.a.c.b ENSGT00940000156081 #12 ENSGT00940000163284 ENSGT00940000154367.a #21 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154853.c ENSGT00940000154853.d ENSGT00940000158566 Long-tailed chinchilla MODERN SPECIES 129 MARK2 (ENSCLAG00000017063) SPINDOC (ENSCLAG00000016329) ZFTA (ENSCLAG00000016548) ENSCLAG00000016800 ATL3 (ENSCLAG00000016950) PLAAT3 (ENSCLAG00000017157) PLAAT2 (ENSCLAG00000016552) FBP2 (ENSCLAG00000016623) #34 FBP1 (ENSCLAG00000017181) #33 ENSCLAG00000016743 #31 ENSCLAG00000017128 #31 FANCC (ENSCLAG00000016996) #30 PTCH1 (ENSCLAG00000016919) #29 ERCC6L2 (ENSCLAG00000016395) HSD17B3 (ENSCLAG00000016961) #27 PRXL2C (ENSCLAG00000016163) #22 ENSCLAG00000017065 #23 HABP4 (ENSCLAG00000016858) #24 ZNF367 (ENSCLAG00000016816) #25 ENSCLAG00000017191 #14 CTSV (ENSCLAG00000016668) #21 ENSCLAG00000016927 ZNF484 (ENSCLAG00000017189) MFSD14B (ENSCLAG00000016962) #12 ENSCLAG00000016812 MANBAL (ENSCLAG00000017093) GHRH (ENSCLAG00000017196) RPN2 (ENSCLAG00000015587) MROH8 (ENSCLAG00000016903) RBL1 (ENSCLAG00000017232) SAMHD1 (ENSCLAG00000017223) Degu DUPLICATION Degu MODERN SPECIES 138 TMX3 (ENSODEG00000005564) ENSODEG00000005594 #22 ENSODEG00000005052 ENSODEG00000005064 CDH19 (ENSODEG00000005082) CDH7 (ENSODEG00000005126) ENSODEG00000019197 SERPINB2 (ENSODEG00000005185) ENSODEG00000005206 ENSODEG00000019230 SERPINB5 (ENSODEG00000005216) ENSODEG00000005222 VPS4B (ENSODEG00000005230) KDSR (ENSODEG00000005258) BCL2 (ENSODEG00000005287) ZCCHC2 (ENSODEG00000005310) RELCH (ENSODEG00000005369) Degu MODERN SPECIES 225 ENSODEG00000016057 ENSODEG00000016317 #12 CTSV (ENSODEG00000016040) #21 ENSODEG00000020401 ENSODEG00000016407 #22 ENSODEG00000016766 ENSODEG00000016541 #23 ENSODEG00000015838 #24 ZNF367 (ENSODEG00000016186) #25 ENSODEG00000016377 SLC35D2 (ENSODEG00000016013) #26 HSD17B3 (ENSODEG00000015880) #27 ENSODEG00000016588 #28 ENSODEG00000016127 PTCH1 (ENSODEG00000016019) #29 ENSODEG00000015865 FANCC (ENSODEG00000016098) #30 ENSODEG00000015655 #31 FBP1 (ENSODEG00000015932) #33 FBP2 (ENSODEG00000016600) #34 Lagomorpha ANCESTRAL SPECIES 150 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154367.b.f.a ##21 ENSGT00940000154367.b.f.b ##21 ENSGT00940000153424.a.b Rabbit MODERN SPECIES NFIL3 (ENSOCUG00000000145) ENSOCUG00000038426 ROR2 (ENSOCUG00000016548) SPTLC1 (ENSOCUG00000008078) ENSOCUG00000035088 ENSOCUG00000012553 ##15 ENSOCUG00000008249 #15 ENSOCUG00000011174 ##15 ENSOCUG00000003550 #15 ENSOCUG00000029501 FAM240B (ENSOCUG00000029919) #18 ENSOCUG00000008405 CTSV (ENSOCUG00000008397) #21 ENSOCUG00000039654 ZNF782 (ENSOCUG00000029054) PRXL2C (ENSOCUG00000013208) #22 ENSOCUG00000005332 #23 ENSOCUG00000023077 #24 SLC35D2 (ENSOCUG00000008540) #26 HSD17B3 (ENSOCUG00000008531) #27 ENSOCUG00000023971 ENSOCUG00000000442 #28 ENSOCUG00000008778 PTCH1 (ENSOCUG00000002973) #29 FANCC (ENSOCUG00000010476) #30 AOPEP (ENSOCUG00000000678) #31 FBP1 (ENSOCUG00000029295) #33 ENSOCUG00000029172 ##21 ENSOCUG00000017854 ##21 ENSOCUG00000017008 ##21 DAPK1 (ENSOCUG00000003518) Tree shrew MODERN SPECIES 9454 ENSTBEG00000005443 PRXL2C (ENSTBEG00000005773) #22 Primates ANCESTRAL SPECIES 9 ENSGT00390000011897 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000156081 #12 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000162764.A ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000154367.b ##21 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 Strepsirrhini ANCESTRAL SPECIES ENSGT00510000048363 #22 Bushbaby MODERN SPECIES 203 S1PR3 (ENSOGAG00000011514) NXNL2 (ENSOGAG00000002167) SPIN1 (ENSOGAG00000002166) CDK20 (ENSOGAG00000008726) #19 ENSOGAG00000012304 ENSOGAG00000027205 #13 ZNF169 (ENSOGAG00000001828) PTPDC1 (ENSOGAG00000006733) BARX1 (ENSOGAG00000003345) ENSOGAG00000028712 PHF2 (ENSOGAG00000025710) FAM120A (ENSOGAG00000031505) ENSOGAG00000011866 ENSOGAG00000029124 ENSOGAG00000024737 ENSOGAG00000017058 #22 ZNF510 (ENSOGAG00000004170) ZNF782 (ENSOGAG00000005589) ENSOGAG00000003992 #16 ENSOGAG00000034919 ##15 ZNF658 (ENSOGAG00000027640) ENSOGAG00000032637 ZNF484 (ENSOGAG00000029152) MFSD14B (ENSOGAG00000012986) #12 ENSOGAG00000028083 WNK2 (ENSOGAG00000015885) NINJ1 (ENSOGAG00000025448) CARD19 (ENSOGAG00000025973) SUSD3 (ENSOGAG00000015877) FGD3 (ENSOGAG00000007894) BICD2 (ENSOGAG00000002635) Lemuriformes ANCESTRAL SPECIES 84 ENSGT00390000010053 ENSGT00390000011897 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000156081 #12 ENSGT00940000163284 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00510000048363 #22 Lemuriformes_a ANCESTRAL SPECIES 170 ENSGT00940000154471.a.b.a.a ENSGT00940000159597 ENSGT00390000006976 ENSGT00390000016408 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00940000153505.a.b.b ENSGT00940000156081 #12 ENSGT00940000163284 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00390000005708.f ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00510000048363 #22 Greater bamboo lemur MODERN SPECIES 1465 ENSPSMG00000013122 #21 ZNF782 (ENSPSMG00000013135) ENSPSMG00000013140 #22 Mouse lemur MODERN SPECIES 1 ENSMICG00000035447 MFSD14B (ENSMICG00000013141) #12 ENSMICG00000046897 ENSMICG00000028181 ZNF484 (ENSMICG00000009252) ENSMICG00000030968 ENSMICG00000028276 ENSMICG00000028834 ZNF658 (ENSMICG00000042550) ENSMICG00000033419 #16 ENSMICG00000033450 ENSMICG00000029296 FAM240B (ENSMICG00000038032) #18 CTSV (ENSMICG00000008715) #21 ZNF782 (ENSMICG00000014905) PRXL2C (ENSMICG00000032554) #22 CDK20 (ENSMICG00000002945) #19 ENSMICG00000003697 ZNF169 (ENSMICG00000003159) PTPDC1 (ENSMICG00000006876) BARX1 (ENSMICG00000045287) PHF2 (ENSMICG00000011463) ENSMICG00000011445 ENSMICG00000029452 SPIN1 (ENSMICG00000048058) NXNL2 (ENSMICG00000045442) SHC3 (ENSMICG00000036874) CKS2 (ENSMICG00000043815) SECISBP2 (ENSMICG00000001176) SEMA4D (ENSMICG00000001178) GADD45G (ENSMICG00000030733) Haplorrhini ANCESTRAL SPECIES 57 ENSGT00940000163284 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000162764.A ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 Tarsier MODERN SPECIES 7341 PRXL2C (ENSTSYG00000014664) #22 Simiiformes ANCESTRAL SPECIES 37 ENSGT00940000156081 #12 ENSGT00940000163284 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000162764.A ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000163169 ENSGT00410000025793.b.t ENSGT00940000156081 #12 ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B ENSGT00550000076453 Cercopithecidae DUPLICATION Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES ENSGT00510000048363.e.a #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00510000048363.e.a #22 Golden snub-nosed monkey MODERN SPECIES 2066 ENSRROG00000028467 #22 Black snub-nosed monkey MODERN SPECIES 355 ENSRBIG00000040115 #22 Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00510000048363.e.a.a #22 Vervet Monkey MODERN SPECIES 3 PHF2 (ENSCSAG00000007054) BARX1 (ENSCSAG00000007043) PTPDC1 (ENSCSAG00000007033) ZNF169 (ENSCSAG00000007022) ENSCSAG00000007011 MFSD14B (ENSCSAG00000006995) #12 ANKRD18B (ENSCSAG00000006989) ENSCSAG00000006981 ZNF484 (ENSCSAG00000006974) ZNF658 (ENSCSAG00000006965) ENSCSAG00000006953 #15 ENSCSAG00000006901 #16 ENSCSAG00000006794 CTSV (ENSCSAG00000006790) #21 ENSCSAG00000006782 PRXL2C (ENSCSAG00000006764) #22 ENSCSAG00000006736 #23 HABP4 (ENSCSAG00000006711) #24 ZNF367 (ENSCSAG00000006700) #25 SLC35D2 (ENSCSAG00000006682) #26 HSD17B3 (ENSCSAG00000006626) #27 ERCC6L2 (ENSCSAG00000006596) PTCH1 (ENSCSAG00000006537) #29 FANCC (ENSCSAG00000006433) #30 AOPEP (ENSCSAG00000006410) #31 FBP1 (ENSCSAG00000006399) #33 FBP2 (ENSCSAG00000006385) #34 TEKT4 (ENSCSAG00000006380) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00510000048363.e.a.a #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00510000048363.e.a.a #22 Cercopithecinae_d ANCESTRAL SPECIES 108 ENSGT00390000004113 ENSGT00940000165911 ENSGT00940000163169 ENSGT00410000025793.b.t ENSGT01070000253921 ENSGT00940000156081 #12 ENSGT00940000163510.D ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00940000163669 ENSGT00940000160228.x #16 ENSGT00530000069333.a #18 ENSGT01050000245888.a ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00510000048363.e.a.a #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B ENSGT00550000076453 Sooty mangabey MODERN SPECIES 109 ENSCATG00000029814 ENSCATG00000030909 MFSD14B (ENSCATG00000032863) #12 ENSCATG00000031931 ENSCATG00000038654 ZNF484 (ENSCATG00000029970) ENSCATG00000030028 ENSCATG00000019880 ENSCATG00000019926 ZNF658 (ENSCATG00000032510) ENSCATG00000035993 #16 FAM240B (ENSCATG00000044157) #18 ANKRD18B (ENSCATG00000027085) CTSV (ENSCATG00000037585) #21 ZNF782 (ENSCATG00000015893) ENSCATG00000034172 #22 ENSCATG00000037256 #23 ENSCATG00000021520 HABP4 (ENSCATG00000040518) #24 ZNF367 (ENSCATG00000042183) #25 SLC35D2 (ENSCATG00000036124) #26 HSD17B3 (ENSCATG00000035198) #27 ERCC6L2 (ENSCATG00000039681) PTCH1 (ENSCATG00000033231) #29 FANCC (ENSCATG00000030963) #30 AOPEP (ENSCATG00000031331) #31 FBP1 (ENSCATG00000040445) #33 FBP2 (ENSCATG00000033535) #34 TEKT4 (ENSCATG00000015986) ENSCATG00000034400 Cercopithecinae ANCESTRAL SPECIES ENSGT00510000048363.e.a.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00510000048363.e.a.b #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00510000048363.e.a.b #22 Olive baboon MODERN SPECIES 792 ENSPANG00000039410 ENSPANG00000046059 ENSPANG00000044832 ENSPANG00000029603 #22 NLGN4X (ENSPANG00000013392) PUDP (ENSPANG00000006960) STS (ENSPANG00000015621) PNPLA4 (ENSPANG00000012311) ANOS1 (ENSPANG00000020427) FAM9B (ENSPANG00000008548) ENSPANG00000046530 ENSPANG00000040998 TBL1X (ENSPANG00000016547) GPR143 (ENSPANG00000010106) SHROOM2 (ENSPANG00000005170) WWC3 (ENSPANG00000017940) CLCN4 (ENSPANG00000020606) MID1 (ENSPANG00000006683) HCCS (ENSPANG00000004637) Cercopithecinae_d ANCESTRAL SPECIES 51 ENSGT00940000162883.c ENSGT00940000162413 ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b.eb ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00510000048363.e.a.b #22 ENSGT01030000234626.A.b.o.a ENSGT00940000156607.a.a.a ENSGT00390000014753.l.a ENSGT00940000161153 ENSGT00940000162022 ENSGT00440000033720.a ENSGT00390000000062.x.b.g.b ENSGT00390000000062.x.b.g.a ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i ENSGT00390000016722 ENSGT00390000016478.i.b ENSGT00940000155212 ENSGT00410000025556.a.b ENSGT00940000158265 Sooty mangabey MODERN SPECIES 448 ENSCATG00000035971 SLC25A6 (ENSCATG00000011264) ASMTL (ENSCATG00000021222) AKAP17A (ENSCATG00000043302) ASMT (ENSCATG00000029353) DHRSX (ENSCATG00000025135) CD99 (ENSCATG00000023170) XG (ENSCATG00000031578) GYG2 (ENSCATG00000041872) ARSD (ENSCATG00000031084) ARSL (ENSCATG00000043732) ARSH (ENSCATG00000035369) ARSF (ENSCATG00000037426) MXRA5 (ENSCATG00000032500) PRKX (ENSCATG00000040178) ENSCATG00000044673 #22 ENSCATG00000033348 NLGN4X (ENSCATG00000045063) PUDP (ENSCATG00000039040) STS (ENSCATG00000042492) PNPLA4 (ENSCATG00000041197) ANOS1 (ENSCATG00000034938) FAM9A (ENSCATG00000017254) FAM9B (ENSCATG00000037312) ENSCATG00000028947 TBL1X (ENSCATG00000010513) GPR143 (ENSCATG00000032300) ENSCATG00000030274 SHROOM2 (ENSCATG00000036342) WWC3 (ENSCATG00000036479) CLCN4 (ENSCATG00000045208) Drill MODERN SPECIES 316 DHRSX (ENSMLEG00000012634) ZBED1 (ENSMLEG00000022851) CD99 (ENSMLEG00000040327) XG (ENSMLEG00000028813) GYG2 (ENSMLEG00000038126) ARSD (ENSMLEG00000031691) ARSL (ENSMLEG00000042870) ARSH (ENSMLEG00000011210) ARSF (ENSMLEG00000033547) MXRA5 (ENSMLEG00000044099) PRKX (ENSMLEG00000029098) ENSMLEG00000035662 #22 ENSMLEG00000028136 NLGN4X (ENSMLEG00000035839) Cercopithecidae ANCESTRAL SPECIES ENSGT00510000048363.e.b #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00510000048363.e.b #22 Golden snub-nosed monkey MODERN SPECIES 3252 ZNF510 (ENSRROG00000037276) PRXL2C (ENSRROG00000036920) #22 ENSRROG00000036107 #23 HABP4 (ENSRROG00000039635) #24 ZNF367 (ENSRROG00000029683) #25 SLC35D2 (ENSRROG00000013075) #26 HSD17B3 (ENSRROG00000002674) #27 Cercopithecinae ANCESTRAL SPECIES ENSGT00510000048363.e.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00510000048363.e.b #22 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000156081 #12 ENSGT00940000163510.D ENSGT01030000235462.f ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b #15 ENSGT00940000163669 ENSGT00940000160228.x #16 ENSGT00530000069333.a #18 ENSGT00940000164347 ENSGT00940000163510.B ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00510000048363.e.b #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B ENSGT00550000076453 Olive baboon MODERN SPECIES 4 ENSPANG00000032596 ZNF169 (ENSPANG00000024689) ENSPANG00000024688 MFSD14B (ENSPANG00000024686) #12 ENSPANG00000042402 ZNF658 (ENSPANG00000024644) ENSPANG00000022870 #15 ENSPANG00000042828 ENSPANG00000024641 FAM240B (ENSPANG00000049907) #18 ENSPANG00000042937 ENSPANG00000024642 #16 ENSPANG00000038692 CTSV (ENSPANG00000038323) #21 ZNF782 (ENSPANG00000029757) PRXL2C (ENSPANG00000049957) #22 ENSPANG00000024637 #23 HABP4 (ENSPANG00000024636) #24 ZNF367 (ENSPANG00000033224) #25 SLC35D2 (ENSPANG00000024634) #26 HSD17B3 (ENSPANG00000024646) #27 ERCC6L2 (ENSPANG00000024647) PTCH1 (ENSPANG00000024654) #29 ENSPANG00000042015 FANCC (ENSPANG00000024653) #30 AOPEP (ENSPANG00000024652) #31 FBP2 (ENSPANG00000024650) #34 TEKT4 (ENSPANG00000024649) ENSPANG00000046722 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00390000004113 ENSGT00940000165911 ENSGT00940000163169 ENSGT00410000025793.b.t ENSGT00940000156081 #12 ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00390000013988 ENSGT00940000163669 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B Rhinopithecus ANCESTRAL SPECIES 248 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00390000013132.q.a.b ENSGT00950000182894.B Black snub-nosed monkey MODERN SPECIES 377 ENSRBIG00000032664 #16 FAM240B (ENSRBIG00000039695) #18 CTSV (ENSRBIG00000038849) #21 ZNF782 (ENSRBIG00000044941) ZNF510 (ENSRBIG00000038910) ENSRBIG00000027628 #22 ENSRBIG00000040088 #23 HABP4 (ENSRBIG00000042343) #24 ENSRBIG00000013156 ZNF367 (ENSRBIG00000031984) #25 SLC35D2 (ENSRBIG00000034500) #26 HSD17B3 (ENSRBIG00000036582) #27 ENSRBIG00000018434 #28 ENSRBIG00000043857 PTCH1 (ENSRBIG00000029681) #29 FANCC (ENSRBIG00000044845) #30 ENSRBIG00000033464 AOPEP (ENSRBIG00000035706) #31 ENSRBIG00000037014 FBP1 (ENSRBIG00000034787) #33 FBP2 (ENSRBIG00000029833) #34 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000163169 ENSGT00410000025793.b.t ENSGT00940000156081 #12 ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000164347 ENSGT00910000147193 ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b #15 ENSGT00390000013988 ENSGT00910000147065 ENSGT00910000147042 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000164347 ENSGT00940000163510.B ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00410000025793.b.t ENSGT00940000156081 #12 ENSGT00940000163510.D ENSGT01030000235462.f ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00940000163284 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b #15 ENSGT00940000163669 ENSGT00940000160228.x #16 ENSGT00530000069333.a #18 ENSGT00940000164347 ENSGT00940000163510.B ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00510000048363.e.b #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B ENSGT00550000076453 Cercopithecinae_d ANCESTRAL SPECIES 286 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 Drill MODERN SPECIES 551 CTSV (ENSMLEG00000024018) #21 ZNF782 (ENSMLEG00000033526) ZNF510 (ENSMLEG00000029215) ENSMLEG00000038053 #22 ENSMLEG00000028306 ENSMLEG00000033594 #23 HABP4 (ENSMLEG00000042696) #24 ZNF367 (ENSMLEG00000038378) #25 SLC35D2 (ENSMLEG00000038387) #26 HSD17B3 (ENSMLEG00000027057) #27 ENSMLEG00000019530 #28 PTCH1 (ENSMLEG00000033804) #29 ENSMLEG00000029290 FANCC (ENSMLEG00000028792) #30 AOPEP (ENSMLEG00000032273) #31 FBP1 (ENSMLEG00000028419) #33 FBP2 (ENSMLEG00000032747) #34 TEKT4 (ENSMLEG00000029443) ENSMLEG00000033236 Macaca ANCESTRAL SPECIES 10 ENSGT01030000235462.f ENSGT00940000163284 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b #15 ENSGT00390000013988 ENSGT00910000147065 ENSGT00910000147042 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT00940000164347 ENSGT00940000163510.B ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B Pig-tailed macaque MODERN SPECIES 272 MFSD14B (ENSMNEG00000035430) #12 ANKRD18B (ENSMNEG00000043127) ENSMNEG00000037772 ZNF484 (ENSMNEG00000042400) ENSMNEG00000031024 #15 ENSMNEG00000030451 ENSMNEG00000016365 ENSMNEG00000040742 ZNF658 (ENSMNEG00000042531) ENSMNEG00000032990 #16 FAM240B (ENSMNEG00000038933) #18 ENSMNEG00000042029 CTSV (ENSMNEG00000023935) #21 ZNF782 (ENSMNEG00000021217) ZNF510 (ENSMNEG00000042087) PRXL2C (ENSMNEG00000037463) #22 ENSMNEG00000041847 #23 HABP4 (ENSMNEG00000031443) #24 ZNF367 (ENSMNEG00000036929) #25 SLC35D2 (ENSMNEG00000039536) #26 HSD17B3 (ENSMNEG00000031910) #27 ENSMNEG00000035630 #28 ENSMNEG00000033696 PTCH1 (ENSMNEG00000038967) #29 ENSMNEG00000044125 FANCC (ENSMNEG00000029159) #30 AOPEP (ENSMNEG00000042607) #31 FBP1 (ENSMNEG00000028215) #33 FBP2 (ENSMNEG00000029604) #34 TEKT4 (ENSMNEG00000035371) ENSMNEG00000031636 Macaca_a ANCESTRAL SPECIES 10 ENSGT00410000025793.b.t ENSGT00940000156081 #12 ENSGT00940000163510.D ENSGT01100000263493.a.b.a.a.a.a.a.a.a.b.a.a.b.b ENSGT00940000163284 ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.a #15 ENSGT00940000160228 #16 ENSGT00530000069333.a #18 ENSGT01050000245888.a ENSGT00940000164347 ENSGT00940000163510.B ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.f #22 ENSGT00940000155950.h #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000166143.A.a.b.a.b.b ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00950000182967.a.a.a.a.b.a.g.b.b ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B ENSGT00550000076453 Rhesus MODERN SPECIES 6 ENSMMUG00000000494 ENSMMUG00000058646 ENSMMUG00000049485 ENSMMUG00000056934 ZNF484 (ENSMMUG00000002396) ENSMMUG00000038652 #15 ZNF658 (ENSMMUG00000007614) ENSMMUG00000016712 #16 ENSMMUG00000050773 FAM240B (ENSMMUG00000059648) #18 ENSMMUG00000052868 ENSMMUG00000008466 CTSV (ENSMMUG00000022971) #21 ZNF782 (ENSMMUG00000041328) ZNF510 (ENSMMUG00000064034) PRXL2C (ENSMMUG00000008295) #22 CDC14B (ENSMMUG00000005997) #23 HABP4 (ENSMMUG00000011369) #24 ZNF367 (ENSMMUG00000060597) #25 SLC35D2 (ENSMMUG00000007992) #26 HSD17B3 (ENSMMUG00000007990) #27 ENSMMUG00000060197 ERCC6L2 (ENSMMUG00000011787) PTCH1 (ENSMMUG00000002634) #29 FANCC (ENSMMUG00000008299) #30 AOPEP (ENSMMUG00000008298) #31 FBP1 (ENSMMUG00000022536) #33 FBP2 (ENSMMUG00000022535) #34 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000052805 ENSMFAG00000051435 ZNF658 (ENSMFAG00000030164) ENSMFAG00000054905 ENSMFAG00000002532 #15 ENSMFAG00000005812 #16 ENSMFAG00000058584 FAM240B (ENSMFAG00000060866) #18 ENSMFAG00000039289 ENSMFAG00000059433 ENSMFAG00000063142 ENSMFAG00000038775 CTSV (ENSMFAG00000035644) #21 ZNF782 (ENSMFAG00000003714) ZNF510 (ENSMFAG00000012154) PRXL2C (ENSMFAG00000053521) #22 ENSMFAG00000041085 #23 HABP4 (ENSMFAG00000034124) #24 ZNF367 (ENSMFAG00000056608) #25 SLC35D2 (ENSMFAG00000000700) #26 HSD17B3 (ENSMFAG00000033598) #27 ENSMFAG00000059381 ERCC6L2 (ENSMFAG00000043281) PTCH1 (ENSMFAG00000031893) #29 ENSMFAG00000030351 FANCC (ENSMFAG00000034968) #30 ENSMFAG00000061994 AOPEP (ENSMFAG00000003845) #31 ENSMFAG00000061577 ENSMFAG00000047226 ENSMFAG00000065386 Hominoidea ANCESTRAL SPECIES 19 ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000153246.a.a.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363 #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00490000044166 ENSGT00940000163752 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00950000182894.B Gibbon MODERN SPECIES 10 HEMGN (ENSNLEG00000016935) TRMO (ENSNLEG00000016930) ENSNLEG00000031602 NCBP1 (ENSNLEG00000016909) TSTD2 (ENSNLEG00000016904) TMOD1 (ENSNLEG00000016899) TDRD7 (ENSNLEG00000016885) CCDC180 (ENSNLEG00000016862) ENSNLEG00000016858 ENSNLEG00000029601 #15 CTSV (ENSNLEG00000016847) #21 ENSNLEG00000018342 ZNF782 (ENSNLEG00000016845) ZNF510 (ENSNLEG00000016838) ENSNLEG00000027861 PRXL2C (ENSNLEG00000036194) #22 CDC14B (ENSNLEG00000016822) #23 HABP4 (ENSNLEG00000016819) #24 ENSNLEG00000029121 ENSNLEG00000016813 #25 SLC35D2 (ENSNLEG00000016807) #26 HSD17B3 (ENSNLEG00000032342) #27 ENSNLEG00000016784 #28 ENSNLEG00000032943 PTCH1 (ENSNLEG00000016755) #29 ENSNLEG00000010465 FANCC (ENSNLEG00000016749) #30 AOPEP (ENSNLEG00000016734) #31 FBP1 (ENSNLEG00000016727) #33 FBP2 (ENSNLEG00000016721) #34 TEKT4 (ENSNLEG00000016708) Hominidae ANCESTRAL SPECIES 10 ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000153246.a.a.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363 #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000156081 #12 ENSGT00410000025793.b.t Orangutan MODERN SPECIES 22 NANS (ENSPPYG00000019431) ANP32B (ENSPPYG00000019430) HEMGN (ENSPPYG00000038384) TRMO (ENSPPYG00000019429) FOXE1 (ENSPPYG00000019428) XPA (ENSPPYG00000019427) NCBP1 (ENSPPYG00000019426) TSTD2 (ENSPPYG00000019425) TMOD1 (ENSPPYG00000019424) TDRD7 (ENSPPYG00000019423) CCDC180 (ENSPPYG00000019422) ENSPPYG00000033114 CTSV (ENSPPYG00000019421) #21 ZNF782 (ENSPPYG00000019420) ZNF510 (ENSPPYG00000040706) PRXL2C (ENSPPYG00000019418) #22 CDC14B (ENSPPYG00000019417) #23 HABP4 (ENSPPYG00000029705) #24 ZNF367 (ENSPPYG00000019416) #25 SLC35D2 (ENSPPYG00000019415) #26 HSD17B3 (ENSPPYG00000019414) #27 ERCC6L2 (ENSPPYG00000019412) PTCH1 (ENSPPYG00000019409) #29 ENSPPYG00000037532 FANCC (ENSPPYG00000019408) #30 AOPEP (ENSPPYG00000019407) #31 FBP1 (ENSPPYG00000019405) #33 FBP2 (ENSPPYG00000019404) #34 ENSPPYG00000035462 ENSPPYG00000019046 ENSPPYG00000019401 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a.q.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.g #22 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363.h.a #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00950000182907.a.b.b.a.q.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363.g #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000156081 #12 Pan ANCESTRAL SPECIES 18 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363.h.a #22 ENSGT00940000155950.g.b.c #23 ENSGT00510000048363.g #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000156081 #12 ENSGT00410000025793.b.t Chimpanzee MODERN SPECIES 22 FOXE1 (ENSPTRG00000029193) XPA (ENSPTRG00000021168) NCBP1 (ENSPTRG00000021167) TSTD2 (ENSPTRG00000021166) TMOD1 (ENSPTRG00000021165) TDRD7 (ENSPTRG00000022912) CCDC180 (ENSPTRG00000021162) ENSPTRG00000049659 ENSPTRG00000029267 CTSV (ENSPTRG00000002675) #21 ENSPTRG00000021159 #12 ENSPTRG00000021132 ZNF782 (ENSPTRG00000021157) ZNF510 (ENSPTRG00000023307) ENSPTRG00000044248 PRXL2C (ENSPTRG00000021156) #22 CDC14B (ENSPTRG00000021155) #23 HABP4 (ENSPTRG00000021154) #24 ENSPTRG00000046335 ZNF367 (ENSPTRG00000021153) #25 SLC35D2 (ENSPTRG00000021151) #26 HSD17B3 (ENSPTRG00000021150) #27 ENSPTRG00000043521 ERCC6L2 (ENSPTRG00000048689) #28 PTCH1 (ENSPTRG00000046951) #29 ENSPTRG00000049213 ENSPTRG00000039664 FANCC (ENSPTRG00000021140) #30 AOPEP (ENSPTRG00000021139) #31 FBP1 (ENSPTRG00000021138) #33 FBP2 (ENSPTRG00000021136) #34 Human MODERN SPECIES 21 NANS (ENSG00000095380) ANP32B (ENSG00000136938) HEMGN (ENSG00000136929) TRMO (ENSG00000136932) FOXE1 (ENSG00000178919) XPA (ENSG00000136936) NCBP1 (ENSG00000136937) TSTD2 (ENSG00000136925) TMOD1 (ENSG00000136842) TDRD7 (ENSG00000196116) CCDC180 (ENSG00000197816) CTSV (ENSG00000136943) #21 NUTM2G (ENSG00000188152) ZNF782 (ENSG00000196597) ZNF510 (ENSG00000081386) PRXL2C (ENSG00000158122) #22 CDC14B (ENSG00000081377) #23 HABP4 (ENSG00000130956) #24 ZNF367 (ENSG00000165244) #25 SLC35D2 (ENSG00000130958) #26 HSD17B3 (ENSG00000130948) #27 ERCC6L2 (ENSG00000182150) PTCH1 (ENSG00000185920) #29 FANCC (ENSG00000158169) #30 AOPEP (ENSG00000148120) #31 FBP1 (ENSG00000165140) #33 FBP2 (ENSG00000130957) #34 MFSD14B (ENSG00000148110) #12 NUTM2F (ENSG00000130950) ZNF169 (ENSG00000175787) PTPDC1 (ENSG00000158079) Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363.g #22 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363.h.a #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000163752 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 ENSGT00940000156081 #12 Homo/Pan group ANCESTRAL SPECIES 87 ENSGT00510000048363.h.a #22 ENSGT00940000155950.g.b.c #23 Pan ANCESTRAL SPECIES 18 ENSGT00950000182907.a.b.b.a.q.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 ENSGT00390000002721 ENSGT00390000001733 ENSGT00390000016307 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.b ENSGT00940000163510.D ENSGT00940000154367.a #21 ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ENSGT00510000048363.h.a #22 ENSGT00940000155950.g.b.c #23 ENSGT00510000048363.g #22 ENSGT00940000155950.g.a #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000013091.p ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 Bonobo MODERN SPECIES 22 NANS (ENSPPAG00000027418) ANP32B (ENSPPAG00000040611) HEMGN (ENSPPAG00000034879) TRMO (ENSPPAG00000013453) XPA (ENSPPAG00000040453) NCBP1 (ENSPPAG00000026462) TSTD2 (ENSPPAG00000028289) TMOD1 (ENSPPAG00000028497) TDRD7 (ENSPPAG00000041009) CCDC180 (ENSPPAG00000009246) ENSPPAG00000033776 CTSV (ENSPPAG00000041013) #21 ZNF782 (ENSPPAG00000040069) ZNF510 (ENSPPAG00000038934) ENSPPAG00000033645 ENSPPAG00000038888 #22 ENSPPAG00000039845 #23 HABP4 (ENSPPAG00000031320) #24 ZNF367 (ENSPPAG00000035864) #25 ENSPPAG00000039175 #26 HSD17B3 (ENSPPAG00000040278) #27 ENSPPAG00000042252 ENSPPAG00000035061 #28 PTCH1 (ENSPPAG00000042033) #29 ENSPPAG00000033158 FANCC (ENSPPAG00000037232) #30 AOPEP (ENSPPAG00000028823) #31 FBP1 (ENSPPAG00000042827) #33 FBP2 (ENSPPAG00000034055) #34 MFSD14B (ENSPPAG00000025011) #12 ZNF169 (ENSPPAG00000037304) Gorilla MODERN SPECIES 22 ANP32B (ENSGGOG00000011631) HEMGN (ENSGGOG00000011390) TRMO (ENSGGOG00000007683) ENSGGOG00000003735 XPA (ENSGGOG00000001381) NCBP1 (ENSGGOG00000001376) TSTD2 (ENSGGOG00000001374) TMOD1 (ENSGGOG00000001369) TDRD7 (ENSGGOG00000015269) CCDC180 (ENSGGOG00000012429) ENSGGOG00000025728 ENSGGOG00000041208 CTSV (ENSGGOG00000024642) #21 ZNF782 (ENSGGOG00000013745) ZNF510 (ENSGGOG00000002140) ENSGGOG00000036718 #22 CDC14B (ENSGGOG00000008986) #23 HABP4 (ENSGGOG00000012317) #24 ZNF367 (ENSGGOG00000012699) #25 SLC35D2 (ENSGGOG00000007499) #26 HSD17B3 (ENSGGOG00000002825) #27 ENSGGOG00000004382 ENSGGOG00000002705 #28 PTCH1 (ENSGGOG00000008123) #29 ENSGGOG00000040052 FANCC (ENSGGOG00000005983) #30 AOPEP (ENSGGOG00000005975) #31 FBP1 (ENSGGOG00000005671) #33 FBP2 (ENSGGOG00000005665) #34 MFSD14B (ENSGGOG00000008483) #12 ENSGGOG00000008048 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00950000183061.a.a.a.a.b ENSGT00940000153168.A ENSGT00900000143202.b ENSGT00390000008820.e.b.a.a.a ENSGT00940000160157 ENSGT00940000155516 ENSGT00940000153259.a.a.a ENSGT00390000008859.b.d.k.a.b.b ENSGT00940000158517 ENSGT00940000153336.e.a.a.a.b.a.b ENSGT00390000001432 ENSGT00940000154453.b.a.b.b ENSGT01090000260082.d.a.a.a.a.c ENSGT00390000014785 ENSGT00940000159316 ENSGT00510000048363.h.b #22 ENSGT00390000018389 ENSGT00950000182870.a.a.b.i.b ENSGT00940000162717 ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00940000154103.b ENSGT00950000182925.D.a.b.a.b ENSGT00940000154152.d.a.a ENSGT00940000164739.b ENSGT00940000164739.a ENSGT00940000154746.h ENSGT00940000162502.c ENSGT00950000182925.D.a.b.a.a.b ENSGT00950000182925.D.a.a.b.b ENSGT00390000012916.h.a.a Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00950000183061.a.a.a.a.b ENSGT00940000153168.A ENSGT00900000143202.b ENSGT00390000008820.e.b.a.a.a ENSGT00940000160157 ENSGT00940000155516 ENSGT00940000153259.a.a.a ENSGT00390000008859.b.d.k.a.b.b ENSGT00940000158517 ENSGT00940000153336.e.a.a.a.b.a.b ENSGT00390000001432 ENSGT00940000154453.b.a.b.b ENSGT01090000260082.d.a.a.a.a.c ENSGT00390000014785 ENSGT00940000159316 ENSGT00510000048363.h.b #22 ENSGT00390000018389 ENSGT00940000162717 ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00940000154103.b ENSGT00950000182925.D.a.b.a.b ENSGT00940000154152.d.a.a ENSGT00940000164739.b ENSGT00940000164739.a ENSGT00940000154746.h ENSGT00940000162502.c ENSGT00950000182925.D.a.b.a.a.b ENSGT00950000182925.D.a.a.b.b ENSGT00390000012916.h.a.a ENSGT00390000004891 Pan ANCESTRAL SPECIES 6 ENSGT00940000153168.A ENSGT00900000143202.b ENSGT00390000008820.e.b.a.a.a ENSGT00940000160157 ENSGT00940000155516 ENSGT00940000153259.a.a.a ENSGT00390000008859.b.d.k.a.b.b ENSGT00940000158517 ENSGT00940000153336.e.a.a.a.b.a.b ENSGT00390000001432 ENSGT00940000154453.b.a.b.b ENSGT01090000260082.d.a.a.a.a.c ENSGT00530000063721.B.j ENSGT00390000014785 ENSGT00940000159316 ENSGT00510000048363.h.b #22 ENSGT00390000018389 ENSGT00940000167416 ENSGT00940000162717 ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00940000154103.b ENSGT00950000182925.D.a.b.a.b ENSGT00940000154152.d.a.a ENSGT00940000164739.b ENSGT00940000164739.a ENSGT00940000154746.h ENSGT00940000162502.c ENSGT00950000182925.D.a.b.a.a.b.b ENSGT00950000182925.D.a.b.a.a.b.a ENSGT00950000182925.D.a.a.b.b Chimpanzee MODERN SPECIES 972 YIPF6 (ENSPTRG00000051628) ENSPTRG00000051896 OPHN1 (ENSPTRG00000021979) AR (ENSPTRG00000032525) EDA2R (ENSPTRG00000021977) ENSPTRG00000044272 HEPH (ENSPTRG00000046447) ENSPTRG00000049274 VSIG4 (ENSPTRG00000021973) ENSPTRG00000052470 ENSPTRG00000048378 MSN (ENSPTRG00000043871) ENSPTRG00000047745 LAS1L (ENSPTRG00000021970) ZC3H12B (ENSPTRG00000021969) ENSPTRG00000042678 #22 ZC4H2 (ENSPTRG00000021968) ENSPTRG00000049126 MTMR8 (ENSPTRG00000021967) ASB12 (ENSPTRG00000023939) AMER1 (ENSPTRG00000028264) ARHGEF9 (ENSPTRG00000021964) SPIN4 (ENSPTRG00000021963) ENSPTRG00000046006 ENSPTRG00000021962 ZXDB (ENSPTRG00000028265) ENSPTRG00000043211 ENSPTRG00000044247 FAAH2 (ENSPTRG00000021960) ENSPTRG00000045900 ENSPTRG00000043533 Bonobo MODERN SPECIES 369 YIPF6 (ENSPPAG00000041673) ENSPPAG00000040306 ENSPPAG00000043601 OPHN1 (ENSPPAG00000021549) AR (ENSPPAG00000038688) EDA2R (ENSPPAG00000001055) HEPH (ENSPPAG00000037746) ENSPPAG00000038159 VSIG4 (ENSPPAG00000033935) ENSPPAG00000031010 ENSPPAG00000033953 MSN (ENSPPAG00000034551) ENSPPAG00000029012 LAS1L (ENSPPAG00000034161) ZC3H12B (ENSPPAG00000039530) ENSPPAG00000035515 #22 ZC4H2 (ENSPPAG00000039016) ENSPPAG00000037846 MTMR8 (ENSPPAG00000014635) ASB12 (ENSPPAG00000031745) AMER1 (ENSPPAG00000011145) ARHGEF9 (ENSPPAG00000023374) SPIN4 (ENSPPAG00000024587) ENSPPAG00000039611 ENSPPAG00000029850 FAAH2 (ENSPPAG00000039172) ENSPPAG00000014717 ENSPPAG00000036835 ENSPPAG00000010875 ENSPPAG00000028086 NBDY (ENSPPAG00000003509) Gorilla MODERN SPECIES 523 YIPF6 (ENSGGOG00000007149) ENSGGOG00000037195 ENSGGOG00000037101 OPHN1 (ENSGGOG00000034944) AR (ENSGGOG00000005477) EDA2R (ENSGGOG00000009174) ENSGGOG00000043872 HEPH (ENSGGOG00000009064) ENSGGOG00000037535 ENSGGOG00000041250 VSIG4 (ENSGGOG00000000336) ENSGGOG00000013331 MSN (ENSGGOG00000001823) LAS1L (ENSGGOG00000008739) ZC3H12B (ENSGGOG00000024638) ENSGGOG00000041261 #22 ZC4H2 (ENSGGOG00000009687) ENSGGOG00000027970 MTMR8 (ENSGGOG00000015976) ASB12 (ENSGGOG00000007888) ENSGGOG00000009940 ARHGEF9 (ENSGGOG00000003158) SPIN4 (ENSGGOG00000002720) ENSGGOG00000027034 ZXDA (ENSGGOG00000040244) ZXDB (ENSGGOG00000037283) ENSGGOG00000043341 FAAH2 (ENSGGOG00000025619) ENSGGOG00000041892 ENSGGOG00000040276 ENSGGOG00000011187 Platyrrhini ANCESTRAL SPECIES ENSGT00510000048363 #22 Mas night monkey MODERN SPECIES 953 ENSANAG00000028009 ENSANAG00000029034 ENSANAG00000030940 ENSANAG00000024002 ENSANAG00000034297 ENSANAG00000023167 ENSANAG00000019400 FAM240B (ENSANAG00000027625) #18 CTSV (ENSANAG00000025241) #21 ENSANAG00000029914 ZNF782 (ENSANAG00000024951) ZNF510 (ENSANAG00000030522) ENSANAG00000037094 ENSANAG00000023875 ENSANAG00000023712 PRXL2C (ENSANAG00000034602) #22 ENSANAG00000020550 ENSANAG00000035688 ENSANAG00000024265 #23 HABP4 (ENSANAG00000035090) #24 ZNF367 (ENSANAG00000033540) #25 SLC35D2 (ENSANAG00000028518) #26 HSD17B3 (ENSANAG00000032106) #27 ERCC6L2 (ENSANAG00000023092) PTCH1 (ENSANAG00000029389) #29 ENSANAG00000030325 FANCC (ENSANAG00000028572) #30 ENSANAG00000010088 AOPEP (ENSANAG00000030033) #31 ENSANAG00000026785 #33 FBP2 (ENSANAG00000031346) #34 Cebidae ANCESTRAL SPECIES 52 ENSGT00510000048363 #22 ENSGT01010000222530.b.a.a ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 Marmoset MODERN SPECIES ENSCJAG00000086138 ENSCJAG00000073981 NFIL3 (ENSCJAG00000005728) ENSCJAG00000005695 SYK (ENSCJAG00000005666) ENSCJAG00000062354 DIRAS2 (ENSCJAG00000039042) ENSCJAG00000051243 ENSCJAG00000072229 ENSCJAG00000005635 ##21 DAPK1 (ENSCJAG00000005569) ENSCJAG00000074564 GAS1 (ENSCJAG00000062210) ENSCJAG00000084670 ZNF484 (ENSCJAG00000005536) PRXL2C (ENSCJAG00000076685) #22 ENSCJAG00000061833 ENSCJAG00000012598 #23 HABP4 (ENSCJAG00000012589) #24 ENSCJAG00000040778 #25 SLC35D2 (ENSCJAG00000012556) #26 ENSCJAG00000047796 #19 ENSCJAG00000064535 CTSV (ENSCJAG00000046004) #21 ENSCJAG00000067353 ENSCJAG00000076862 ENSCJAG00000075286 FBP2 (ENSCJAG00000021334) #34 FBP1 (ENSCJAG00000041493) #33 AOPEP (ENSCJAG00000021327) #31 FANCC (ENSCJAG00000021324) #30 Cebidae_a ANCESTRAL SPECIES 85 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000153424.a.b ENSGT00940000154367.b.g ##21 ENSGT00940000163051 ENSGT01050000244891.B.i.b ENSGT00940000154367.a #21 ENSGT00530000069333.a #18 ENSGT00390000006208.b.b ENSGT00940000160228 #16 ENSGT00510000048363 #22 ENSGT01010000222530.b.a.a ENSGT00940000155950 #23 ENSGT00520000055591.b #24 ENSGT00670000098074 #25 ENSGT00940000160237 #26 ENSGT00940000160266 #27 ENSGT00940000161328 #28 ENSGT00940000159011 #29 ENSGT00390000016390 #30 ENSGT00940000155211 #31 ENSGT00390000015513.a.a.a #33 ENSGT00390000015513.a.a.b #34 Capuchin MODERN SPECIES 196 DAPK1 (ENSCCAG00000021962) CTSL (ENSCCAG00000021572) ##21 ENSCCAG00000034381 ZNF782 (ENSCCAG00000032117) ENSCCAG00000023112 CTSV (ENSCCAG00000030717) #21 FAM240B (ENSCCAG00000037201) #18 ENSCCAG00000027284 ENSCCAG00000037426 #16 ENSCCAG00000023018 ENSCCAG00000021897 ENSCCAG00000036180 ENSCCAG00000025019 ENSCCAG00000032829 #15 ENSCCAG00000031010 PRXL2C (ENSCCAG00000021330) #22 ENSCCAG00000030771 ENSCCAG00000004738 ENSCCAG00000026671 #23 HABP4 (ENSCCAG00000029535) #24 ENSCCAG00000025778 ZNF367 (ENSCCAG00000011083) #25 SLC35D2 (ENSCCAG00000019726) #26 HSD17B3 (ENSCCAG00000032712) #27 ENSCCAG00000026980 #28 PTCH1 (ENSCCAG00000021603) #29 ENSCCAG00000029017 ENSCCAG00000034109 FANCC (ENSCCAG00000026638) #30 AOPEP (ENSCCAG00000029936) #31 FBP1 (ENSCCAG00000005125) #33 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 193 ENSSBOG00000025632 VIPR2 (ENSSBOG00000008700) DYNC2I1 (ENSSBOG00000030479) ESYT2 (ENSSBOG00000027315) NCAPG2 (ENSSBOG00000023699) PTPRN2 (ENSSBOG00000024253) ENSSBOG00000021508 #22 ENSSBOG00000019223 UBE3C (ENSSBOG00000028621) ENSSBOG00000017310 ENSSBOG00000022284 LMBR1 (ENSSBOG00000024908) RNF32 (ENSSBOG00000024131) ENSSBOG00000019819 RBM33 (ENSSBOG00000029765) ENSSBOG00000025648 ENSSBOG00000025158 HTR5A (ENSSBOG00000018779) ENSSBOG00000014188 PAXIP1 (ENSSBOG00000023365) ENSSBOG00000024425 Bolivian squirrel monkey MODERN SPECIES 140 CDK20 (ENSSBOG00000000634) #19 ZNF169 (ENSSBOG00000028455) PTPDC1 (ENSSBOG00000004417) ENSSBOG00000032959 PHF2 (ENSSBOG00000032633) FAM120A (ENSSBOG00000028151) ENSSBOG00000031256 ENSSBOG00000030330 WNK2 (ENSSBOG00000025266) ENSSBOG00000033994 NINJ1 (ENSSBOG00000027212) CARD19 (ENSSBOG00000019116) SUSD3 (ENSSBOG00000026433) FGD3 (ENSSBOG00000030603) ZNF510 (ENSSBOG00000028269) ENSSBOG00000002057 #22 ENSSBOG00000036373 ENSSBOG00000016229 #23 HABP4 (ENSSBOG00000031480) #24 ZNF367 (ENSSBOG00000023140) #25 SLC35D2 (ENSSBOG00000031140) #26 HSD17B3 (ENSSBOG00000028438) #27 ERCC6L2 (ENSSBOG00000027390) ENSSBOG00000022156 PTCH1 (ENSSBOG00000028218) #29 ENSSBOG00000026970 FANCC (ENSSBOG00000020880) #30 AOPEP (ENSSBOG00000001088) #31 FBP1 (ENSSBOG00000028185) #33 FBP2 (ENSSBOG00000025654) #34 ENSSBOG00000031000