Percora_a	ANCESTRAL SPECIES	29	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT01030000235189	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000161328	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT01030000235189	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000161328	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37
Caprinae	ANCESTRAL SPECIES	14	ENSGT00940000159597 #8	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37	ENSGT00390000001195.a
Rambouillet Sheep	MODERN SPECIES	11	CARD19 (ENSOARG00020001118) #7	FGD3 (ENSOARG00020001158) #8	BICD2 (ENSOARG00020001190) #9	IPPK (ENSOARG00020001217) #10	CENPP (ENSOARG00020001265) #11	ECM2 (ENSOARG00020001301) #12	ASPN (ENSOARG00020001312) #13	OMD (ENSOARG00020001323) #14	OGN (ENSOARG00020001335) #15	NOL8 (ENSOARG00020001357) #16	IARS1 (ENSOARG00020001407) #17	ZNF484 (ENSOARG00020001616) #18	ENSOARG00020001669 #19	FAM240B (ENSOARG00020001683) #20	CTSV (ENSOARG00020001702) #21	PRXL2C (ENSOARG00020001718) #22	CDC14B (ENSOARG00020001763) #23	ENSOARG00020002021 #24	HABP4 (ENSOARG00020002042) #25	ZNF367 (ENSOARG00020002077) #26	SLC35D2 (ENSOARG00020002106) #27	HSD17B3 (ENSOARG00020002196) #28	ENSOARG00020002258 #29	ERCC6L2 (ENSOARG00020002268) #30	PTCH1 (ENSOARG00020002334) #31	FANCC (ENSOARG00020002435) #32	AOPEP (ENSOARG00020002497) #33	FBP1 (ENSOARG00020002574) #34	FBP2 (ENSOARG00020002620) #35	CTSL (ENSOARG00020002639) #36	DAPK1 (ENSOARG00020002680) #37
Goat	MODERN SPECIES	27	FGD3 (ENSCHIG00000009338) #8	BICD2 (ENSCHIG00000022062) #9	IPPK (ENSCHIG00000008640) #10	ECM2 (ENSCHIG00000017909) #12	ASPN (ENSCHIG00000015608) #13	OMD (ENSCHIG00000025168) #14	OGN (ENSCHIG00000016330) #15	ENSCHIG00000014248 #11	NOL8 (ENSCHIG00000023837) #16	IARS1 (ENSCHIG00000023719) #17	ZNF484 (ENSCHIG00000010357) #18	ENSCHIG00000025319 #19	FAM240B (ENSCHIG00000017288) #20	CTSV (ENSCHIG00000008805) #21	ZNF782 (ENSCHIG00000016455)	PRXL2C (ENSCHIG00000023456) #22	ENSCHIG00000009780 #23	HABP4 (ENSCHIG00000018392) #25	ZNF367 (ENSCHIG00000020288) #26	SLC35D2 (ENSCHIG00000020406) #27	HSD17B3 (ENSCHIG00000027090) #28	ENSCHIG00000016622 #29	ERCC6L2 (ENSCHIG00000020777) #30	PTCH1 (ENSCHIG00000013837) #31	ENSCHIG00000022324	FANCC (ENSCHIG00000021780) #32	AOPEP (ENSCHIG00000011940) #33	FBP2 (ENSCHIG00000017472) #35	CTSL (ENSCHIG00000020875) #36	DAPK1 (ENSCHIG00000013443) #37	GAS1 (ENSCHIG00000007592)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT01030000235189	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000161328	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37
American bison	MODERN SPECIES	2992	IPPK (ENSBBBG00000002153) #10	ENSBBBG00000011664	ECM2 (ENSBBBG00000011657) #12	ASPN (ENSBBBG00000011634) #13	OMD (ENSBBBG00000002138) #14	OGN (ENSBBBG00000011606) #15	CENPP (ENSBBBG00000011595) #11	NOL8 (ENSBBBG00000007305) #16	IARS1 (ENSBBBG00000011459) #17	ZNF484 (ENSBBBG00000011408) #18	ENSBBBG00000011394 #19	FAM240B (ENSBBBG00000011389) #20	CTSV (ENSBBBG00000011377) #21	ZNF782 (ENSBBBG00000002064)	ENSBBBG00000002059	PRXL2C (ENSBBBG00000011344) #22	ENSBBBG00000011311 #23	HABP4 (ENSBBBG00000011198) #25	ZNF367 (ENSBBBG00000002021) #26	SLC35D2 (ENSBBBG00000011173) #27	HSD17B3 (ENSBBBG00000011138) #28	ENSBBBG00000011110 #29	ENSBBBG00000011107	PTCH1 (ENSBBBG00000001995) #31	FANCC (ENSBBBG00000011004) #32	AOPEP (ENSBBBG00000007304) #33	FBP1 (ENSBBBG00000001945) #34	FBP2 (ENSBBBG00000010933) #35	CTSL (ENSBBBG00000010912) #36	DAPK1 (ENSBBBG00000010880) #37
Bos	ANCESTRAL SPECIES	10	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00950000183198.c.a.a.a.a.c.a	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000161328	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00950000183198.c.a.a.a.a.c.a	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000163752 #30	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT01100000263481.n.a.a.b.b.b.a.a.b.a.b	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37
Cow	MODERN SPECIES	27	FGD3 (ENSBTAG00000006939) #8	BICD2 (ENSBTAG00000046549) #9	IPPK (ENSBTAG00000011859) #10	ECM2 (ENSBTAG00000024081) #12	ASPN (ENSBTAG00000011847) #13	OMD (ENSBTAG00000011836) #14	OGN (ENSBTAG00000011824) #15	CENPP (ENSBTAG00000011814) #11	NOL8 (ENSBTAG00000018613) #16	IARS1 (ENSBTAG00000000974) #17	ZNF484 (ENSBTAG00000031682) #18	ENSBTAG00000009764 #19	CTSV (ENSBTAG00000017077) #21	ZNF782 (ENSBTAG00000008836)	ENSBTAG00000037600	PRXL2C (ENSBTAG00000020749) #22	CDC14B (ENSBTAG00000011589) #23	HABP4 (ENSBTAG00000011586) #25	ZNF367 (ENSBTAG00000006587) #26	SLC35D2 (ENSBTAG00000019939) #27	HSD17B3 (ENSBTAG00000016867) #28	ENSBTAG00000053599 #29	ERCC6L2 (ENSBTAG00000020626) #30	PTCH1 (ENSBTAG00000009903) #31	FANCC (ENSBTAG00000017195) #32	AOPEP (ENSBTAG00000000699) #33	ENSBTAG00000049470	FBP1 (ENSBTAG00000009733) #34	FBP2 (ENSBTAG00000019554) #35	CTSL (ENSBTAG00000000720) #36	DAPK1 (ENSBTAG00000000738) #37
Bos_a	ANCESTRAL SPECIES	20	ENSGT00940000154471.a.b.a.a #9	ENSGT00390000010053 #10	ENSGT00940000159941 #12	ENSGT00940000157444 #13	ENSGT00940000160986 #14	ENSGT00940000157238 #15	ENSGT00390000011897 #11	ENSGT00390000004860 #16	ENSGT00550000074921 #17	ENSGT00940000163284 #18	ENSGT00950000183043.a.b.b.a.a.a.a.b #19	ENSGT00530000069333.a #20	ENSGT00940000154367.a #21	ENSGT00940000163051	ENSGT00950000183198.c.a.a.a.a.c.a	ENSGT00510000048363 #22	ENSGT00940000155950 #23	ENSGT00520000055591.b #25	ENSGT00670000098074 #26	ENSGT00940000160237 #27	ENSGT00940000160266 #28	ENSGT00940000165777.b #29	ENSGT00940000161328	ENSGT00940000159011 #31	ENSGT00390000016390 #32	ENSGT00940000155211 #33	ENSGT00390000015513.a.a.a #34	ENSGT00390000015513.a.a.b #35	ENSGT00940000154367.b #36	ENSGT00940000153424.a.b #37	ENSGT00390000001195.a
Domestic yak	MODERN SPECIES	26	BICD2 (ENSBGRG00000013860) #9	IPPK (ENSBGRG00000013623) #10	ECM2 (ENSBGRG00000013425) #12	ASPN (ENSBGRG00000013260) #13	OMD (ENSBGRG00000013215) #14	OGN (ENSBGRG00000013163) #15	CENPP (ENSBGRG00000013099) #11	NOL8 (ENSBGRG00000012947) #16	IARS1 (ENSBGRG00000012252) #17	ZNF484 (ENSBGRG00000012197) #18	ENSBGRG00000012121 #19	FAM240B (ENSBGRG00000012064) #20	CTSV (ENSBGRG00000012003) #21	ZNF782 (ENSBGRG00000011910)	ENSBGRG00000011890	PRXL2C (ENSBGRG00000011780) #22	ENSBGRG00000011754	ENSBGRG00000011305 #23	HABP4 (ENSBGRG00000010967) #25	ZNF367 (ENSBGRG00000010925) #26	SLC35D2 (ENSBGRG00000010244) #27	ENSBGRG00000010208	ERCC6L2 (ENSBGRG00000009781) #30	PTCH1 (ENSBGRG00000009313) #31	ENSBGRG00000009288	FANCC (ENSBGRG00000009148) #32	AOPEP (ENSBGRG00000008818) #33	ENSBGRG00000006482	CTSL (ENSBGRG00000006446) #36	FBP2 (ENSBGRG00000006288) #35	DAPK1 (ENSBGRG00000005913) #37
Wild yak	MODERN SPECIES	1603													CTSV (ENSBMUG00000001673) #21	ZNF782 (ENSBMUG00000001743)	ENSBMUG00000001763	PRXL2C (ENSBMUG00000001782) #22	ENSBMUG00000001939 #23	HABP4 (ENSBMUG00000002019) #25	ZNF367 (ENSBMUG00000002068) #26	ENSBMUG00000002090 #27
Siberian musk deer	MODERN SPECIES	328	FGD3 (ENSMMSG00000009438) #8	BICD2 (ENSMMSG00000009303) #9	IPPK (ENSMMSG00000009229) #10	ECM2 (ENSMMSG00000009172) #12	ASPN (ENSMMSG00000009119) #13	OMD (ENSMMSG00000009072) #14	ENSMMSG00000009029	OGN (ENSMMSG00000009002) #15	CENPP (ENSMMSG00000008957) #11	NOL8 (ENSMMSG00000008845) #16	IARS1 (ENSMMSG00000008349) #17	ZNF484 (ENSMMSG00000008310) #18	FAM240B (ENSMMSG00000008287) #20	CTSV (ENSMMSG00000008251) #21	ZNF782 (ENSMMSG00000008217)	PRXL2C (ENSMMSG00000008179) #22	ENSMMSG00000008052 #23	HABP4 (ENSMMSG00000007990) #25	ZNF367 (ENSMMSG00000007964) #26	SLC35D2 (ENSMMSG00000007742) #27	HSD17B3 (ENSMMSG00000007613) #28	ENSMMSG00000007564	ERCC6L2 (ENSMMSG00000007507) #30	PTCH1 (ENSMMSG00000007210) #31	FANCC (ENSMMSG00000007120) #32	AOPEP (ENSMMSG00000007017) #33	FBP1 (ENSMMSG00000006947) #34	FBP2 (ENSMMSG00000006907) #35	CTSL (ENSMMSG00000006857) #36	DAPK1 (ENSMMSG00000006717) #37	GAS1 (ENSMMSG00000012475)