Mus	ANCESTRAL SPECIES	1	ENSGT00940000156773 #8	ENSGT01090000260597	ENSGT00940000163383 #9	ENSGT00940000156235 #10	ENSGT00390000012207 #11	ENSGT00940000153601.a.a #12	ENSGT00940000160918 #13	ENSGT00940000159729 #14	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382 #27	ENSGT00940000154745.a #28	ENSGT00390000014118 #29	ENSGT00940000156959.B #30	ENSGT00940000157531 #31	ENSGT01030000236295	ENSGT00940000159211.C #32	ENSGT00940000159789 #33	ENSGT00940000154143.e #34	ENSGT00940000153385.b.a.a #35	ENSGT01020000230782 #36
Mus_A	ANCESTRAL SPECIES		ENSGT00940000156773 #8	ENSGT01090000260597	ENSGT00940000163383 #9	ENSGT00940000156235 #10	ENSGT00390000012207 #11	ENSGT00940000153601.a.a #12	ENSGT00940000160918 #13	ENSGT00940000159729 #14	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382 #27	ENSGT00940000154745.a #28	ENSGT00390000014118 #29	ENSGT00940000156959.B #30	ENSGT00940000157531 #31	ENSGT01030000236295	ENSGT00940000159211.C #32	ENSGT00940000159789 #33	ENSGT00940000154143.e #34	ENSGT00940000153385.b.a.a #35	ENSGT01020000230782 #36
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156773 #8	ENSGT01090000260597	ENSGT00940000163383 #9	ENSGT00940000156235 #10	ENSGT00390000012207 #11	ENSGT00940000153601.a.a #12	ENSGT00940000160918 #13	ENSGT00940000159729 #14	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382 #27	ENSGT00940000154745.a #28	ENSGT00390000014118 #29	ENSGT00940000156959.B #30	ENSGT00940000157531 #31	ENSGT01030000236295	ENSGT00940000159211.C #32	ENSGT00940000159789 #33	ENSGT00940000154143.e #34	ENSGT00940000153385.b.a.a #35	ENSGT01020000230782 #36
Mouse	MODERN SPECIES	11	Coq4 (ENSMUSG00000026798) #7	Trub2 (ENSMUSG00000039826) #8	Gm13420 (ENSMUSG00000079497) #9	Rapgef1 (ENSMUSG00000039844) #10	Med27 (ENSMUSG00000026799) #11	Ntng2 (ENSMUSG00000035513) #12	Setx (ENSMUSG00000043535) #13	Ttf1 (ENSMUSG00000026803) #14	Cfap77 (ENSMUSG00000079502) #15	Barhl1 (ENSMUSG00000026805) #16	Ddx31 (ENSMUSG00000026806) #17	Gtf3c4 (ENSMUSG00000035666) #18	Ak8 (ENSMUSG00000026807) #19	Spaca9 (ENSMUSG00000026809) #20	Tsc1 (ENSMUSG00000026812) #21	Gfi1b (ENSMUSG00000026815) #22	Gtf3c5 (ENSMUSG00000026816) #23	Cel (ENSMUSG00000026818) #24	Ralgds (ENSMUSG00000026821) #25	Gbgt1 (ENSMUSG00000026829) #26	Mrps2 (ENSMUSG00000035772) #27	Pierce1 (ENSMUSG00000026831) #28	Ppp1r26 (ENSMUSG00000035829) #29	Olfm1 (ENSMUSG00000026833) #30	Fcnb (ENSMUSG00000026835) #31	Col5a1 (ENSMUSG00000026837) #32	Rxra (ENSMUSG00000015846) #33	Wdr5 (ENSMUSG00000026917) #34	Brd3 (ENSMUSG00000026918) #35	Brd3os (ENSMUSG00000109946) #36	Vav2 (ENSMUSG00000009621) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000156773 #8	ENSGT01090000260597	ENSGT00940000163383 #9	ENSGT00940000156235 #10	ENSGT00390000012207 #11	ENSGT00940000153601.a.a #12	ENSGT00940000160918 #13	ENSGT00940000159729 #14	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382 #27	ENSGT00940000154745.a #28	ENSGT00390000014118 #29	ENSGT00940000156959.B #30	ENSGT00940000157531 #31	ENSGT01030000236295	ENSGT00940000159211.C #32	ENSGT00940000159789 #33	ENSGT00940000154143.e #34	ENSGT00940000153385.b.a.a #35	ENSGT00940000159718 #37
Steppe mouse	MODERN SPECIES	3038										ENSMSIG00000020831 #16	Ddx31 (ENSMSIG00000020635) #17	Gtf3c4 (ENSMSIG00000020618) #18	Ak8 (ENSMSIG00000020545) #19	ENSMSIG00000020517 #20	Tsc1 (ENSMSIG00000020389) #21	Gfi1b (ENSMSIG00000020374) #22	Gtf3c5 (ENSMSIG00000020342) #23	Cel (ENSMSIG00000020324) #24	Ralgds (ENSMSIG00000020228) #25	Gbgt1 (ENSMSIG00000020208) #26	Mrps2 (ENSMSIG00000020191) #27	Pierce1 (ENSMSIG00000020180) #28	Ppp1r26 (ENSMSIG00000020170) #29	Olfm1 (ENSMSIG00000020131) #30	ENSMSIG00000020119 #31	ENSMSIG00000020105	Col5a1 (ENSMSIG00000019992) #32	ENSMSIG00000019950 #33	Wdr5 (ENSMSIG00000019932) #34	Brd3 (ENSMSIG00000019895) #35	Vav2 (ENSMSIG00000019732) #37
spretus	MODERN SPECIES	11	Coq4 (MGP_SPRETEiJ_G0024287) #7	Trub2 (MGP_SPRETEiJ_G0024286) #8	MGP_SPRETEiJ_G0024285	Rapgef1 (MGP_SPRETEiJ_G0024284) #10	Med27 (MGP_SPRETEiJ_G0024283) #11	Ntng2 (MGP_SPRETEiJ_G0024282) #12	Setx (MGP_SPRETEiJ_G0024281) #13	Ttf1 (MGP_SPRETEiJ_G0024280) #14	Cfap77 (MGP_SPRETEiJ_G0024279) #15	Barhl1 (MGP_SPRETEiJ_G0024278) #16	Ddx31 (MGP_SPRETEiJ_G0024277) #17	Gtf3c4 (MGP_SPRETEiJ_G0024276) #18	Ak8 (MGP_SPRETEiJ_G0024275) #19	Spaca9 (MGP_SPRETEiJ_G0024274) #20	Tsc1 (MGP_SPRETEiJ_G0024273) #21	Gfi1b (MGP_SPRETEiJ_G0024272) #22	Gtf3c5 (MGP_SPRETEiJ_G0024271) #23	Cel (MGP_SPRETEiJ_G0024270) #24	Ralgds (MGP_SPRETEiJ_G0024269) #25	Gbgt1 (MGP_SPRETEiJ_G0024268) #26	Mrps2 (MGP_SPRETEiJ_G0024267) #27	Pierce1 (MGP_SPRETEiJ_G0024266) #28	Ppp1r26 (MGP_SPRETEiJ_G0024265) #29	Olfm1 (MGP_SPRETEiJ_G0024264) #30	Fcnb (MGP_SPRETEiJ_G0024263) #31	Col5a1 (MGP_SPRETEiJ_G0024262) #32	Rxra (MGP_SPRETEiJ_G0024261) #33	Wdr5 (MGP_SPRETEiJ_G0024260) #34	Brd3 (MGP_SPRETEiJ_G0024259) #35	Vav2 (MGP_SPRETEiJ_G0024258) #37	Sardh (MGP_SPRETEiJ_G0024257)
Ryukyu mouse	MODERN SPECIES	11	Coq4 (MGP_CAROLIEiJ_G0023370) #7	MGP_CAROLIEiJ_G0023369	Trub2 (MGP_CAROLIEiJ_G0023368) #8	Rapgef1 (MGP_CAROLIEiJ_G0023367) #10	Med27 (MGP_CAROLIEiJ_G0023366) #11	Ntng2 (MGP_CAROLIEiJ_G0023365) #12	Setx (MGP_CAROLIEiJ_G0023364) #13	Ttf1 (MGP_CAROLIEiJ_G0023363) #14	Cfap77 (MGP_CAROLIEiJ_G0023362) #15	Barhl1 (MGP_CAROLIEiJ_G0023361) #16	Ddx31 (MGP_CAROLIEiJ_G0023360) #17	Gtf3c4 (MGP_CAROLIEiJ_G0023359) #18	Ak8 (MGP_CAROLIEiJ_G0023358) #19	Spaca9 (MGP_CAROLIEiJ_G0023357) #20	Tsc1 (MGP_CAROLIEiJ_G0023356) #21	Gfi1b (MGP_CAROLIEiJ_G0023355) #22	Gtf3c5 (MGP_CAROLIEiJ_G0023354) #23	Cel (MGP_CAROLIEiJ_G0023353) #24	Ralgds (MGP_CAROLIEiJ_G0023352) #25	Gbgt1 (MGP_CAROLIEiJ_G0023351) #26	Mrps2 (MGP_CAROLIEiJ_G0023350) #27	Pierce1 (MGP_CAROLIEiJ_G0023349) #28	Ppp1r26 (MGP_CAROLIEiJ_G0023348) #29	Olfm1 (MGP_CAROLIEiJ_G0023347) #30	Fcnb (MGP_CAROLIEiJ_G0023346) #31	Col5a1 (MGP_CAROLIEiJ_G0023345) #32	Rxra (MGP_CAROLIEiJ_G0023344) #33	Wdr5 (MGP_CAROLIEiJ_G0023343) #34	Brd3 (MGP_CAROLIEiJ_G0023342) #35	Vav2 (MGP_CAROLIEiJ_G0023341) #37	Sardh (MGP_CAROLIEiJ_G0023340)
Shrew mouse	MODERN SPECIES	16	Coq4 (MGP_PahariEiJ_G0024827) #7	Trub2 (MGP_PahariEiJ_G0024826) #8	MGP_PahariEiJ_G0024825	Rapgef1 (MGP_PahariEiJ_G0024824) #10	Med27 (MGP_PahariEiJ_G0024823) #11	Ntng2 (MGP_PahariEiJ_G0024822) #12	Setx (MGP_PahariEiJ_G0024821) #13	MGP_PahariEiJ_G0024820 #14	Cfap77 (MGP_PahariEiJ_G0024819) #15	Barhl1 (MGP_PahariEiJ_G0024818) #16	Ddx31 (MGP_PahariEiJ_G0024817) #17	Gtf3c4 (MGP_PahariEiJ_G0024816) #18	Ak8 (MGP_PahariEiJ_G0024815) #19	Spaca9 (MGP_PahariEiJ_G0024814) #20	Tsc1 (MGP_PahariEiJ_G0024813) #21	MGP_PahariEiJ_G0024812 #22	Gtf3c5 (MGP_PahariEiJ_G0024811) #23	Cel (MGP_PahariEiJ_G0024810) #24	Ralgds (MGP_PahariEiJ_G0024809) #25	Gbgt1 (MGP_PahariEiJ_G0024808) #26	Mrps2 (MGP_PahariEiJ_G0024807) #27	MGP_PahariEiJ_G0024806 #28	MGP_PahariEiJ_G0024805 #29	Olfm1 (MGP_PahariEiJ_G0024804) #30	Fcnb (MGP_PahariEiJ_G0024803) #31	Col5a1 (MGP_PahariEiJ_G0024802) #32	MGP_PahariEiJ_G0024801 #33	Wdr5 (MGP_PahariEiJ_G0024800) #34	Brd3 (MGP_PahariEiJ_G0024799) #35	Vav2 (MGP_PahariEiJ_G0024798) #37	Sardh (MGP_PahariEiJ_G0024797)