Gnathostomata	ANCESTRAL SPECIES	1154															ENSGT00390000014148 #21	ENSGT00940000160010 #22
Euteleostomi	ANCESTRAL SPECIES	287						ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00390000004458 #23
Sarcopterygii	ANCESTRAL SPECIES	78	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000159200	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00940000170611	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529	ENSGT00940000159976
Tetrapoda	ANCESTRAL SPECIES	34	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000159200	ENSGT00940000160991	ENSGT00390000009448	ENSGT00940000164565	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800
Amniota	ANCESTRAL SPECIES	27	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Mammalia	ANCESTRAL SPECIES	23	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Theria	ANCESTRAL SPECIES	23	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00940000153294.m.a	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000153294.n	ENSGT00530000064194	ENSGT00940000153294.m.a	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00850000133605	ENSGT01050000244868.a.a.a.b.b ##27	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a.c.a	ENSGT00940000155193.a.a.f	ENSGT00390000014818	ENSGT00940000153294.m.b
Primates	ANCESTRAL SPECIES	9	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a.c.b	ENSGT00940000155193.a.a.f	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a.c.b	ENSGT00940000155193.a.a.f	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Tarsier	MODERN SPECIES	2158														SPACA9 (ENSTSYG00000026698) #20	TSC1 (ENSTSYG00000006969) #21	GFI1B (ENSTSYG00000006831) #22	GTF3C5 (ENSTSYG00000001147) #23	CEL (ENSTSYG00000031983) #24	RALGDS (ENSTSYG00000028839) #25	GBGT1 (ENSTSYG00000028294) #26	ENSTSYG00000026176 #27	LCN1 (ENSTSYG00000007024) #28	ABO (ENSTSYG00000030160) #29
Simiiformes	ANCESTRAL SPECIES	11	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a.c.b.p	ENSGT00940000155193.a.a.f	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.r.b	ENSGT00940000153294.m.a.c.b.p	ENSGT00390000014818	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000156235	ENSGT00390000012207.j	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00390000014818.j	ENSGT00940000153294.m.b.r.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000156235	ENSGT00390000012207.j	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b.d #27	ENSGT01050000244868.a.a.a.a.b.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00390000014818.j	ENSGT00940000153294.m.b.r.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b.c #27	ENSGT01050000244868.a.a.a.a.b.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00390000014818.j	ENSGT00940000153294.m.b.r.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Gorilla	MODERN SPECIES	22	PRRT1B (ENSGGOG00000026372)	RAPGEF1 (ENSGGOG00000008226)	ENSGGOG00000039160	ENSGGOG00000036257	MED27 (ENSGGOG00000010390)	NTNG2 (ENSGGOG00000016200)	SETX (ENSGGOG00000027664)	TTF1 (ENSGGOG00000008285)	CFAP77 (ENSGGOG00000008297)	BARHL1 (ENSGGOG00000008307)	DDX31 (ENSGGOG00000008314)	GTF3C4 (ENSGGOG00000008326)	AK8 (ENSGGOG00000002135)	SPACA9 (ENSGGOG00000002138) #20	TSC1 (ENSGGOG00000002139) #21	GFI1B (ENSGGOG00000015828) #22	GTF3C5 (ENSGGOG00000015837) #23	ENSGGOG00000015855 #24	RALGDS (ENSGGOG00000003440) #25	GBGT1 (ENSGGOG00000003448) #26	ENSGGOG00000009459 #27	ENSGGOG00000006193 #28	ABO (ENSGGOG00000011353) #29	SURF6 (ENSGGOG00000014426)	MED22 (ENSGGOG00000014437)	ENSGGOG00000014442	ENSGGOG00000024950	SURF1 (ENSGGOG00000039195)	SURF2 (ENSGGOG00000014467)	SURF4 (ENSGGOG00000014456)	STKLD1 (ENSGGOG00000014486)
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b.d #27	ENSGT01050000244868.a.a.a.a.b.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607.a
Pan	ANCESTRAL SPECIES	18	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b.c #27	ENSGT01050000244868.a.a.a.a.b.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607.a
Chimpanzee	MODERN SPECIES	22	PRRT1B (ENSPTRG00000051275)	RAPGEF1 (ENSPTRG00000021490)	ENSPTRG00000043931	ENSPTRG00000047190	MED27 (ENSPTRG00000021492)	NTNG2 (ENSPTRG00000021493)	SETX (ENSPTRG00000021495)	TTF1 (ENSPTRG00000021496)	CFAP77 (ENSPTRG00000021497)	BARHL1 (ENSPTRG00000021499)	DDX31 (ENSPTRG00000021500)	GTF3C4 (ENSPTRG00000021501)	AK8 (ENSPTRG00000021502)	SPACA9 (ENSPTRG00000022917) #20	TSC1 (ENSPTRG00000021504) #21	GFI1B (ENSPTRG00000021505) #22	GTF3C5 (ENSPTRG00000021506) #23	RALGDS (ENSPTRG00000021509) #25	GBGT1 (ENSPTRG00000021510) #26	ENSPTRG00000021511 #27	ENSPTRG00000044289 #28	SURF6 (ENSPTRG00000021514)	MED22 (ENSPTRG00000021515)	RPL7A (ENSPTRG00000051833)	SURF1 (ENSPTRG00000021517)	SURF2 (ENSPTRG00000021518)	SURF4 (ENSPTRG00000021519)	STKLD1 (ENSPTRG00000024153)	REXO4 (ENSPTRG00000023363)	ADAMTS13 (ENSPTRG00000022942)	CACFD1 (ENSPTRG00000024267)
Bonobo	MODERN SPECIES	22	ENSPPAG00000033521	RAPGEF1 (ENSPPAG00000040344)	ENSPPAG00000043227	ENSPPAG00000034497	MED27 (ENSPPAG00000043027)	NTNG2 (ENSPPAG00000036118)	SETX (ENSPPAG00000004108)	TTF1 (ENSPPAG00000029768)	CFAP77 (ENSPPAG00000028346)	BARHL1 (ENSPPAG00000031432)	DDX31 (ENSPPAG00000027761)	GTF3C4 (ENSPPAG00000014319)	AK8 (ENSPPAG00000035422)	SPACA9 (ENSPPAG00000028794) #20	TSC1 (ENSPPAG00000035459) #21	GFI1B (ENSPPAG00000030105) #22	GTF3C5 (ENSPPAG00000029135) #23	CEL (ENSPPAG00000034136) #24	RALGDS (ENSPPAG00000041413) #25	GBGT1 (ENSPPAG00000025608) #26	ENSPPAG00000040239 #27	ENSPPAG00000039342 #28	ABO (ENSPPAG00000035877) #29	SURF6 (ENSPPAG00000032305)	MED22 (ENSPPAG00000042477)	ENSPPAG00000018940	SURF1 (ENSPPAG00000028495)	SURF2 (ENSPPAG00000031707)	SURF4 (ENSPPAG00000028946)	STKLD1 (ENSPPAG00000040907)	REXO4 (ENSPPAG00000027911)
Human	MODERN SPECIES	21	POMT1 (ENSG00000130714)	UCK1 (ENSG00000130717)	PRRT1B (ENSG00000283526)	RAPGEF1 (ENSG00000107263)	MED27 (ENSG00000160563)	NTNG2 (ENSG00000196358)	SETX (ENSG00000107290)	TTF1 (ENSG00000125482)	CFAP77 (ENSG00000188523)	BARHL1 (ENSG00000125492)	DDX31 (ENSG00000125485)	GTF3C4 (ENSG00000125484)	AK8 (ENSG00000165695)	SPACA9 (ENSG00000165698) #20	TSC1 (ENSG00000165699) #21	GFI1B (ENSG00000165702) #22	GTF3C5 (ENSG00000148308) #23	CEL (ENSG00000170835) #24	RALGDS (ENSG00000160271) #25	ENSG00000285245	GBGT1 (ENSG00000148288) #26	OBP2B (ENSG00000171102) #27	ABO (ENSG00000175164) #29	SURF6 (ENSG00000148296)	MED22 (ENSG00000148297)	RPL7A (ENSG00000148303)	SURF1 (ENSG00000148290)	SURF2 (ENSG00000148291)	SURF4 (ENSG00000148248)	STKLD1 (ENSG00000198870)	REXO4 (ENSG00000148300)
Orangutan	MODERN SPECIES	22	POMT1 (ENSPPYG00000019703)	UCK1 (ENSPPYG00000019704)	PRRT1B (ENSPPYG00000041277)	RAPGEF1 (ENSPPYG00000019705)	MED27 (ENSPPYG00000019706)	NTNG2 (ENSPPYG00000019707)	SETX (ENSPPYG00000019708)	TTF1 (ENSPPYG00000019709)	CFAP77 (ENSPPYG00000019710)	BARHL1 (ENSPPYG00000039031)	DDX31 (ENSPPYG00000019713)	GTF3C4 (ENSPPYG00000019714)	AK8 (ENSPPYG00000019715)	ENSPPYG00000019716 #20	TSC1 (ENSPPYG00000019717) #21	GFI1B (ENSPPYG00000019718) #22	GTF3C5 (ENSPPYG00000019719) #23	ENSPPYG00000019720	ENSPPYG00000037482 #24	RALGDS (ENSPPYG00000019723) #25	ENSPPYG00000019724	OBP2B (ENSPPYG00000019725) #27	ENSPPYG00000031612 #28	ABO (ENSPPYG00000032466) #29	ENSPPYG00000034398	SURF6 (ENSPPYG00000031162)	MED22 (ENSPPYG00000031224)	ENSPPYG00000019730	ENSPPYG00000019731	ENSPPYG00000019732	SURF4 (ENSPPYG00000019733)
Gibbon	MODERN SPECIES	23	UCK1 (ENSNLEG00000012812)	PRRT1B (ENSNLEG00000012825)	RAPGEF1 (ENSNLEG00000012826)	ENSNLEG00000029445	MED27 (ENSNLEG00000012828)	NTNG2 (ENSNLEG00000012836)	SETX (ENSNLEG00000012839)	TTF1 (ENSNLEG00000012847)	CFAP77 (ENSNLEG00000012857)	BARHL1 (ENSNLEG00000012866)	DDX31 (ENSNLEG00000012870)	GTF3C4 (ENSNLEG00000012911)	AK8 (ENSNLEG00000012917)	SPACA9 (ENSNLEG00000012923) #20	TSC1 (ENSNLEG00000012928) #21	GFI1B (ENSNLEG00000012963) #22	GTF3C5 (ENSNLEG00000012972) #23	CEL (ENSNLEG00000012996) #24	RALGDS (ENSNLEG00000013013) #25	GBGT1 (ENSNLEG00000028325) #26	SURF6 (ENSNLEG00000013079)	MED22 (ENSNLEG00000028828)	ENSNLEG00000035888	RPL7A (ENSNLEG00000013068)	SURF1 (ENSNLEG00000013086)	SURF2 (ENSNLEG00000031716)	SURF4 (ENSNLEG00000013096)	STKLD1 (ENSNLEG00000013124)	ENSNLEG00000013130	ADAMTS13 (ENSNLEG00000013159)	ENSNLEG00000013216
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00910000147066	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00910000147066	ENSGT00390000004339	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.r.b	ENSGT00910000147066	ENSGT00940000153294.m.b.s.e.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00910000147066	ENSGT00940000153294.m.b.s.e.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Cercopithecinae_d	ANCESTRAL SPECIES	166	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00950000182858.A.a.a #29
Sooty mangabey	MODERN SPECIES	218	PRRT1B (ENSCATG00000014149)	RAPGEF1 (ENSCATG00000027023)	ENSCATG00000012578	ENSCATG00000015811	MED27 (ENSCATG00000045015)	NTNG2 (ENSCATG00000036707)	SETX (ENSCATG00000043139)	TTF1 (ENSCATG00000043682)	CFAP77 (ENSCATG00000032071)	BARHL1 (ENSCATG00000030153)	DDX31 (ENSCATG00000038462)	GTF3C4 (ENSCATG00000023239)	AK8 (ENSCATG00000033123)	SPACA9 (ENSCATG00000030256) #20	TSC1 (ENSCATG00000032651) #21	GFI1B (ENSCATG00000031910) #22	GTF3C5 (ENSCATG00000029873) #23	CEL (ENSCATG00000038063) #24	RALGDS (ENSCATG00000011854) #25	ENSCATG00000043947 #27	ABO (ENSCATG00000039429) #29
Drill	MODERN SPECIES	901													SPACA9 (ENSMLEG00000040291) #20	TSC1 (ENSMLEG00000036879) #21	ENSMLEG00000032394	GFI1B (ENSMLEG00000032672) #22	GTF3C5 (ENSMLEG00000038455) #23	CEL (ENSMLEG00000043320) #24	RALGDS (ENSMLEG00000007426) #25	GBGT1 (ENSMLEG00000016615) #26	ENSMLEG00000042872	ABO (ENSMLEG00000034095) #29	SLC5A7 (ENSMLEG00000044117)	ENSMLEG00000012533	ENSMLEG00000031769	ST6GAL2 (ENSMLEG00000033668)	ENSMLEG00000041246	UXS1 (ENSMLEG00000041396)	ECRG4 (ENSMLEG00000030125)	NCK2 (ENSMLEG00000043453)
Olive baboon	MODERN SPECIES	4	POMT1 (ENSPANG00000025980)	UCK1 (ENSPANG00000025985)	PRRT1B (ENSPANG00000025986)	RAPGEF1 (ENSPANG00000025994)	MED27 (ENSPANG00000025993)	NTNG2 (ENSPANG00000025992)	SETX (ENSPANG00000025990)	TTF1 (ENSPANG00000035653)	CFAP77 (ENSPANG00000025989)	BARHL1 (ENSPANG00000025988)	DDX31 (ENSPANG00000025987)	GTF3C4 (ENSPANG00000026029)	AK8 (ENSPANG00000026030)	SPACA9 (ENSPANG00000026038) #20	TSC1 (ENSPANG00000026037) #21	GFI1B (ENSPANG00000024216) #22	GTF3C5 (ENSPANG00000021827) #23	ENSPANG00000046372	RALGDS (ENSPANG00000018172) #25	GBGT1 (ENSPANG00000034220) #26	ENSPANG00000015132 #27	ENSPANG00000026111 #28	ABO (ENSPANG00000003775) #29	SURF6 (ENSPANG00000026036)	MED22 (ENSPANG00000046839)	ENSPANG00000026035	ENSPANG00000026034	SURF2 (ENSPANG00000026033)	SURF4 (ENSPANG00000026032)	STKLD1 (ENSPANG00000026031)	REXO4 (ENSPANG00000026040)
Macaca	ANCESTRAL SPECIES	10	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b.b #28	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.r.b	ENSGT00910000147066	ENSGT00940000153294.m.b.s.e.a	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Pig-tailed macaque	MODERN SPECIES	317	UCK1 (ENSMNEG00000036653)	PRRT1B (ENSMNEG00000042784)	RAPGEF1 (ENSMNEG00000029854)	ENSMNEG00000041728	MED27 (ENSMNEG00000033749)	NTNG2 (ENSMNEG00000033050)	SETX (ENSMNEG00000030657)	TTF1 (ENSMNEG00000028059)	CFAP77 (ENSMNEG00000039824)	DDX31 (ENSMNEG00000045539)	BARHL1 (ENSMNEG00000044595)	GTF3C4 (ENSMNEG00000034001)	AK8 (ENSMNEG00000044559)	SPACA9 (ENSMNEG00000035533) #20	TSC1 (ENSMNEG00000037167) #21	GFI1B (ENSMNEG00000036351) #22	GTF3C5 (ENSMNEG00000029898) #23	CEL (ENSMNEG00000028240) #24	ENSMNEG00000022776	RALGDS (ENSMNEG00000044614) #25	GBGT1 (ENSMNEG00000030334) #26	ENSMNEG00000031544 #27	ENSMNEG00000038584 #28
Macaca_a	ANCESTRAL SPECIES	10	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.a.b	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00940000164691.a.a.a.a.b.a.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b.r.b	ENSGT00940000153294.m.b.s.f	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00390000000529
Crab-eating macaque	MODERN SPECIES	6	ENSMFAG00000047252	NTNG2 (ENSMFAG00000045866)	ENSMFAG00000052185	ENSMFAG00000055541	SETX (ENSMFAG00000039742)	ENSMFAG00000052569	TTF1 (ENSMFAG00000039898)	ENSMFAG00000048053	CFAP77 (ENSMFAG00000001992)	BARHL1 (ENSMFAG00000001005)	DDX31 (ENSMFAG00000036342)	GTF3C4 (ENSMFAG00000041984)	AK8 (ENSMFAG00000032283)	SPACA9 (ENSMFAG00000033110) #20	TSC1 (ENSMFAG00000007299) #21	GFI1B (ENSMFAG00000043346) #22	GTF3C5 (ENSMFAG00000041901) #23	ENSMFAG00000050859	CEL (ENSMFAG00000042247) #24	RALGDS (ENSMFAG00000043674) #25	ENSMFAG00000058803 #28	ENSMFAG00000048334	SURF6 (ENSMFAG00000047763)	ENSMFAG00000036880	MED22 (ENSMFAG00000042665)	SURF1 (ENSMFAG00000032426)	SURF2 (ENSMFAG00000031802)	SURF4 (ENSMFAG00000045368)	ENSMFAG00000057657	STKLD1 (ENSMFAG00000041753)	REXO4 (ENSMFAG00000042425)
Rhesus	MODERN SPECIES	6	UCK1 (ENSMMUG00000009976)	PRRT1B (ENSMMUG00000058925)	RAPGEF1 (ENSMMUG00000006479)	MED27 (ENSMMUG00000001727)	ENSMMUG00000058353	NTNG2 (ENSMMUG00000006923)	SETX (ENSMMUG00000018468)	TTF1 (ENSMMUG00000006833)	CFAP77 (ENSMMUG00000004588)	BARHL1 (ENSMMUG00000058445)	DDX31 (ENSMMUG00000004590)	GTF3C4 (ENSMMUG00000009915)	AK8 (ENSMMUG00000009916)	SPACA9 (ENSMMUG00000021158) #20	TSC1 (ENSMMUG00000009918) #21	GFI1B (ENSMMUG00000005948) #22	GTF3C5 (ENSMMUG00000001267) #23	CEL (ENSMMUG00000001272) #24	RALGDS (ENSMMUG00000015274) #25	ENSMMUG00000054901	ENSMMUG00000050399	ABO (ENSMMUG00000015100) #29	WDR5 (ENSMMUG00000014159)	ENSMMUG00000065260	ENSMMUG00000065261	RPL7A (ENSMMUG00000022341)	SURF6 (ENSMMUG00000022339)	SURF1 (ENSMMUG00000022344)	SURF2 (ENSMMUG00000022346)	SURF4 (ENSMMUG00000022348)	STKLD1 (ENSMMUG00000000934)
Vervet Monkey	MODERN SPECIES	3	PRRC2B (ENSCSAG00000014854)	POMT1 (ENSCSAG00000014870)	UCK1 (ENSCSAG00000014877)	RAPGEF1 (ENSCSAG00000014892)	MED27 (ENSCSAG00000014901)	NTNG2 (ENSCSAG00000014906)	SETX (ENSCSAG00000014918)	TTF1 (ENSCSAG00000014926)	CFAP77 (ENSCSAG00000014940)	BARHL1 (ENSCSAG00000014946)	DDX31 (ENSCSAG00000014953)	GTF3C4 (ENSCSAG00000014958)	AK8 (ENSCSAG00000014967)	SPACA9 (ENSCSAG00000014971) #20	TSC1 (ENSCSAG00000014999) #21	GFI1B (ENSCSAG00000015008) #22	GTF3C5 (ENSCSAG00000015015) #23	CEL (ENSCSAG00000015022) #24	RALGDS (ENSCSAG00000015094) #25	GBGT1 (ENSCSAG00000015155) #26	ENSCSAG00000015173 #27	ENSCSAG00000015183 #28	ABO (ENSCSAG00000015193) #29	ENSCSAG00000015203	MED22 (ENSCSAG00000015210)	SURF1 (ENSCSAG00000015225)	SURF2 (ENSCSAG00000015232)	SURF4 (ENSCSAG00000015237)	STKLD1 (ENSCSAG00000015266)	REXO4 (ENSCSAG00000015280)	ADAMTS13 (ENSCSAG00000015360)
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00910000147066	ENSGT00390000004339	ENSGT00390000014818.h	ENSGT00940000153294.m.b.s	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
Black snub-nosed monkey	MODERN SPECIES	130									BARHL1 (ENSRBIG00000040930)	DDX31 (ENSRBIG00000042353)	GTF3C4 (ENSRBIG00000026348)	AK8 (ENSRBIG00000031522)	SPACA9 (ENSRBIG00000035119) #20	ENSRBIG00000030505	TSC1 (ENSRBIG00000035693) #21	GFI1B (ENSRBIG00000032113) #22	GTF3C5 (ENSRBIG00000031213) #23	CEL (ENSRBIG00000011705) #24	RALGDS (ENSRBIG00000040046) #25	GBGT1 (ENSRBIG00000032070) #26	ABO (ENSRBIG00000041187) #29	SURF6 (ENSRBIG00000028268)	MED22 (ENSRBIG00000012741)	ENSRBIG00000042922	ENSRBIG00000029545	SURF1 (ENSRBIG00000039669)	SURF2 (ENSRBIG00000037030)	SURF4 (ENSRBIG00000044124)	STKLD1 (ENSRBIG00000037451)	REXO4 (ENSRBIG00000037515)	ADAMTS13 (ENSRBIG00000040768)
Golden snub-nosed monkey	MODERN SPECIES	1695	PRRT1B (ENSRROG00000028892)	ENSRROG00000029313	ENSRROG00000031979	RAPGEF1 (ENSRROG00000044132)	MED27 (ENSRROG00000036973)	NTNG2 (ENSRROG00000013877)	SETX (ENSRROG00000040530)	TTF1 (ENSRROG00000042014)	CFAP77 (ENSRROG00000041245)	BARHL1 (ENSRROG00000029855)	DDX31 (ENSRROG00000044427)	GTF3C4 (ENSRROG00000011474)	AK8 (ENSRROG00000007267)	SPACA9 (ENSRROG00000035888) #20	TSC1 (ENSRROG00000040517) #21	GFI1B (ENSRROG00000032600) #22	GTF3C5 (ENSRROG00000038857) #23	CEL (ENSRROG00000043926) #24	RALGDS (ENSRROG00000039481) #25	ENSRROG00000035030 ##26	ABO (ENSRROG00000041717) #29	SURF6 (ENSRROG00000012667)	ENSRROG00000045021	MED22 (ENSRROG00000034974)	ENSRROG00000031476	ENSRROG00000033341	SURF1 (ENSRROG00000041375)	SURF2 (ENSRROG00000028551)	SURF4 (ENSRROG00000037683)	STKLD1 (ENSRROG00000028757)	REXO4 (ENSRROG00000028864)
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a.c.a.e.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123.xd.b	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00390000000529
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.a.e.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123.xd.b	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Marmoset	MODERN SPECIES		PRRT1B (ENSCJAG00000042543)	RAPGEF1 (ENSCJAG00000008301)	MED27 (ENSCJAG00000018305)	ENSCJAG00000085067	NTNG2 (ENSCJAG00000018288)	SETX (ENSCJAG00000018245)	TTF1 (ENSCJAG00000018230)	CFAP77 (ENSCJAG00000018226)	BARHL1 (ENSCJAG00000018212)	DDX31 (ENSCJAG00000018173)	GTF3C4 (ENSCJAG00000018166)	AK8 (ENSCJAG00000018142)	ENSCJAG00000071621	SPACA9 (ENSCJAG00000046099) #20	TSC1 (ENSCJAG00000018087) #21	GFI1B (ENSCJAG00000018071) #22	GTF3C5 (ENSCJAG00000018039) #23	CEL (ENSCJAG00000018024) #24	RALGDS (ENSCJAG00000018000) #25	GBGT1 (ENSCJAG00000043109) #26	ABO (ENSCJAG00000017944) #29	SURF6 (ENSCJAG00000085079)	ENSCJAG00000077420	SURF1 (ENSCJAG00000009542)	ENSCJAG00000076939	SURF2 (ENSCJAG00000009532)	SURF4 (ENSCJAG00000014836)	STKLD1 (ENSCJAG00000009746)	REXO4 (ENSCJAG00000009774)	ADAMTS13 (ENSCJAG00000009791)	CACFD1 (ENSCJAG00000047455)
Cebidae_a	ANCESTRAL SPECIES	76	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26
Bolivian squirrel monkey	MODERN SPECIES	121	POPDC3 (ENSSBOG00000025829)	BVES (ENSSBOG00000024089)	LIN28B (ENSSBOG00000025323)	HACE1 (ENSSBOG00000024126)	NTNG2 (ENSSBOG00000030323)	ENSSBOG00000025878	SETX (ENSSBOG00000028982)	TTF1 (ENSSBOG00000034090)	CFAP77 (ENSSBOG00000014688)	BARHL1 (ENSSBOG00000028564)	DDX31 (ENSSBOG00000021668)	GTF3C4 (ENSSBOG00000021825)	AK8 (ENSSBOG00000024960)	SPACA9 (ENSSBOG00000019863) #20	TSC1 (ENSSBOG00000019012) #21	GFI1B (ENSSBOG00000018523) #22	GTF3C5 (ENSSBOG00000022976) #23	CEL (ENSSBOG00000030353) #24	RALGDS (ENSSBOG00000031916) #25	GBGT1 (ENSSBOG00000034243) #26	ENSSBOG00000030252 #27
Capuchin	MODERN SPECIES	635									CFAP77 (ENSCCAG00000027429)	BARHL1 (ENSCCAG00000008914)	DDX31 (ENSCCAG00000025989)	GTF3C4 (ENSCCAG00000024568)	AK8 (ENSCCAG00000028379)	SPACA9 (ENSCCAG00000025529) #20	TSC1 (ENSCCAG00000028182) #21	GFI1B (ENSCCAG00000029537) #22	GTF3C5 (ENSCCAG00000033556) #23	CEL (ENSCCAG00000024303) #24	RALGDS (ENSCCAG00000026951) #25	GBGT1 (ENSCCAG00000025118) #26	ENSCCAG00000000049 #27	ENSCCAG00000036409 #28
Mas night monkey	MODERN SPECIES	768	UCK1 (ENSANAG00000033402)	PRRT1B (ENSANAG00000033367)	RAPGEF1 (ENSANAG00000030130)	MED27 (ENSANAG00000035284)	NTNG2 (ENSANAG00000027447)	SETX (ENSANAG00000028057)	ENSANAG00000037080	CFAP77 (ENSANAG00000020872)	BARHL1 (ENSANAG00000023140)	DDX31 (ENSANAG00000035120)	GTF3C4 (ENSANAG00000022521)	AK8 (ENSANAG00000025481)	SPACA9 (ENSANAG00000033355) #20	TSC1 (ENSANAG00000018256) #21	ENSANAG00000015018	GFI1B (ENSANAG00000032820) #22	GTF3C5 (ENSANAG00000020332) #23	CEL (ENSANAG00000026870) #24	RALGDS (ENSANAG00000024068) #25	ENSANAG00000033615 #26	ENSANAG00000034013 #28
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531.cb	ENSGT00940000164320	ENSGT00940000157531.db	ENSGT00940000159211.C	ENSGT00910000147521
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531.cb	ENSGT00940000164320	ENSGT00940000157531.db	ENSGT00940000159211.C	ENSGT00910000147521
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531.cb	ENSGT00940000164320	ENSGT00940000157531.db	ENSGT00940000159211.C	ENSGT00910000147521
Coquerels sifaka	MODERN SPECIES	168	POMT1 (ENSPCOG00000024209)	UCK1 (ENSPCOG00000015238)	PRRT1B (ENSPCOG00000020619)	RAPGEF1 (ENSPCOG00000002269)	MED27 (ENSPCOG00000009676)	NTNG2 (ENSPCOG00000025244)	SETX (ENSPCOG00000022383)	ENSPCOG00000020045	CFAP77 (ENSPCOG00000009926)	BARHL1 (ENSPCOG00000009751)	DDX31 (ENSPCOG00000010431)	GTF3C4 (ENSPCOG00000008769)	AK8 (ENSPCOG00000020905)	SPACA9 (ENSPCOG00000010088) #20	TSC1 (ENSPCOG00000005694) #21	GFI1B (ENSPCOG00000013263) #22	GTF3C5 (ENSPCOG00000015281) #23	RALGDS (ENSPCOG00000019492) #25	GBGT1 (ENSPCOG00000019167) #26	ENSPCOG00000005869 #27	LCN1 (ENSPCOG00000024334) #28	MRPS2 (ENSPCOG00000021399)	PIERCE1 (ENSPCOG00000018856)	OLFM1 (ENSPCOG00000027190)	FCN1 (ENSPCOG00000013370)	FCN2 (ENSPCOG00000026673)	COL5A1 (ENSPCOG00000022711)
Greater bamboo lemur	MODERN SPECIES	851				RAPGEF1 (ENSPSMG00000016632)	MED27 (ENSPSMG00000016690)	NTNG2 (ENSPSMG00000016709)	SETX (ENSPSMG00000016750)	ENSPSMG00000016760	CFAP77 (ENSPSMG00000016769)	BARHL1 (ENSPSMG00000016780)	DDX31 (ENSPSMG00000016791)	GTF3C4 (ENSPSMG00000016800)	AK8 (ENSPSMG00000016816)	SPACA9 (ENSPSMG00000016830) #20	TSC1 (ENSPSMG00000017099) #21	GFI1B (ENSPSMG00000017414) #22	GTF3C5 (ENSPSMG00000017481) #23	CEL (ENSPSMG00000017556) #24	RALGDS (ENSPSMG00000017670) #25	ENSPSMG00000017689 #27	LCN1 (ENSPSMG00000017698) #28	MRPS2 (ENSPSMG00000017708)	PIERCE1 (ENSPSMG00000017721)	PPP1R26 (ENSPSMG00000017726)	OLFM1 (ENSPSMG00000017754)	ENSPSMG00000017764	ENSPSMG00000017770	COL5A1 (ENSPSMG00000017852)	ENSPSMG00000017886	RXRA (ENSPSMG00000017946)	WDR5 (ENSPSMG00000017986)
Mouse lemur	MODERN SPECIES	1	RAPGEF1 (ENSMICG00000006835)	ENSMICG00000031134	MED27 (ENSMICG00000003670)	NTNG2 (ENSMICG00000003678)	SETX (ENSMICG00000033597)	ENSMICG00000032240	TTF1 (ENSMICG00000044842)	CFAP77 (ENSMICG00000010567)	BARHL1 (ENSMICG00000045524)	DDX31 (ENSMICG00000010581)	GTF3C4 (ENSMICG00000030831)	AK8 (ENSMICG00000010627)	ENSMICG00000016589	SPACA9 (ENSMICG00000010636) #20	TSC1 (ENSMICG00000010639) #21	GFI1B (ENSMICG00000010656) #22	GTF3C5 (ENSMICG00000010660) #23	CEL (ENSMICG00000033505) #24	RALGDS (ENSMICG00000010670) #25	GBGT1 (ENSMICG00000010686) #26	ENSMICG00000046188 #27	LCN1 (ENSMICG00000044064) #28	MRPS2 (ENSMICG00000030645)	PIERCE1 (ENSMICG00000031679)	PPP1R26 (ENSMICG00000000398)	OLFM1 (ENSMICG00000000544)	FCN1 (ENSMICG00000000452)	COL5A1 (ENSMICG00000000447)	RXRA (ENSMICG00000010833)	WDR5 (ENSMICG00000008085)	ENSMICG00000004674
Bushbaby	MODERN SPECIES	202	PRRC2B (ENSOGAG00000012796)	POMT1 (ENSOGAG00000012801)	ENSOGAG00000028797	RAPGEF1 (ENSOGAG00000004147)	MED27 (ENSOGAG00000004158)	NTNG2 (ENSOGAG00000028768)	SETX (ENSOGAG00000013387)	TTF1 (ENSOGAG00000009611)	CFAP77 (ENSOGAG00000004070)	BARHL1 (ENSOGAG00000004071)	DDX31 (ENSOGAG00000004072)	GTF3C4 (ENSOGAG00000007623)	AK8 (ENSOGAG00000034450)	SPACA9 (ENSOGAG00000008870) #20	TSC1 (ENSOGAG00000008872) #21	GFI1B (ENSOGAG00000008879) #22	GTF3C5 (ENSOGAG00000008881) #23	ENSOGAG00000008886 #24	RALGDS (ENSOGAG00000008888) #25	ENSOGAG00000008626 ##27	ENSOGAG00000013605 #27	ENSOGAG00000032342 #28	MRPS2 (ENSOGAG00000000550)	PIERCE1 (ENSOGAG00000000548)	PPP1R26 (ENSOGAG00000025445)	OLFM1 (ENSOGAG00000006739)	ENSOGAG00000034926	ENSOGAG00000027072	COL5A1 (ENSOGAG00000024645)	RXRA (ENSOGAG00000010970)	WDR5 (ENSOGAG00000008960)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.a ##27	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e
Tree shrew	MODERN SPECIES	4794									ENSTBEG00000013636	DDX31 (ENSTBEG00000013672)	GTF3C4 (ENSTBEG00000013851)	AK8 (ENSTBEG00000013947)	ENSTBEG00000014127	SPACA9 (ENSTBEG00000014137) #20	TSC1 (ENSTBEG00000014176) #21	GFI1B (ENSTBEG00000014459) #22	GTF3C5 (ENSTBEG00000014529) #23	ENSTBEG00000014624	CEL (ENSTBEG00000014670) #24
Glires	ANCESTRAL SPECIES	9	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.a ##27	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782	ENSGT00940000159718
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782	ENSGT00940000159718
Chinese hamster chok1gshd	MODERN SPECIES	188	ENSCGRG00001020194	Gm13420 (ENSCGRG00001019828)	Rapgef1 (ENSCGRG00001020836)	Med27 (ENSCGRG00001021730)	Ntng2 (ENSCGRG00001020557)	Setx (ENSCGRG00001000907)	Ttf1 (ENSCGRG00001024020)	Cfap77 (ENSCGRG00001023845)	Barhl1 (ENSCGRG00001022242)	Ddx31 (ENSCGRG00001014191)	Gtf3c4 (ENSCGRG00001012779)	ENSCGRG00001008263	Ak8 (ENSCGRG00001016050)	Spaca9 (ENSCGRG00001019888) #20	Tsc1 (ENSCGRG00001018344) #21	Gfi1b (ENSCGRG00001016849) #22	Gtf3c5 (ENSCGRG00001019068) #23	Cel (ENSCGRG00001017763) #24	Ralgds (ENSCGRG00001021797) #25	Gbgt1 (ENSCGRG00001024653) #26	Mrps2 (ENSCGRG00001024411)	Pierce1 (ENSCGRG00001023750)	ENSCGRG00001022931	Olfm1 (ENSCGRG00001022283)	Fcnb (ENSCGRG00001023823)	Col5a1 (ENSCGRG00001008534)	Rxra (ENSCGRG00001016924)	Wdr5 (ENSCGRG00001019447)	Brd3 (ENSCGRG00001018938)	Brd3os (ENSCGRG00001006747)	Vav2 (ENSCGRG00001018004)
Golden Hamster	MODERN SPECIES	807						Ntng2 (ENSMAUG00000020166)	Setx (ENSMAUG00000000420)	Ttf1 (ENSMAUG00000009378)	Cfap77 (ENSMAUG00000007733)	Barhl1 (ENSMAUG00000000749)	Ddx31 (ENSMAUG00000016824)	Gtf3c4 (ENSMAUG00000008231)	Ak8 (ENSMAUG00000010208)	Spaca9 (ENSMAUG00000019810) #20	Tsc1 (ENSMAUG00000021557) #21	Gfi1b (ENSMAUG00000018728) #22	Gtf3c5 (ENSMAUG00000001687) #23	Cel (ENSMAUG00000012782) #24	Ralgds (ENSMAUG00000018712) #25	Gbgt1 (ENSMAUG00000011657) #26	Mrps2 (ENSMAUG00000011150)	Ppp1r26 (ENSMAUG00000013002)	ENSMAUG00000017070	Olfm1 (ENSMAUG00000001109)	Fcnb (ENSMAUG00000001057)	Col5a1 (ENSMAUG00000011031)	Rxra (ENSMAUG00000016806)	Wdr5 (ENSMAUG00000013154)	Brd3 (ENSMAUG00000007843)	Brd3os (ENSMAUG00000003794)	Vav2 (ENSMAUG00000010085)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782	ENSGT00940000159718
Prairie vole	MODERN SPECIES	12	ENSMOCG00000013759	Gm13420 (ENSMOCG00000016999)	Rapgef1 (ENSMOCG00000003434)	ENSMOCG00000001471	Med27 (ENSMOCG00000001125)	Ntng2 (ENSMOCG00000007465)	Setx (ENSMOCG00000000848)	Ttf1 (ENSMOCG00000022131)	Cfap77 (ENSMOCG00000010524)	Barhl1 (ENSMOCG00000013749)	Ddx31 (ENSMOCG00000020938)	Gtf3c4 (ENSMOCG00000011365)	Ak8 (ENSMOCG00000015262)	Spaca9 (ENSMOCG00000014407) #20	Tsc1 (ENSMOCG00000003627) #21	Gfi1b (ENSMOCG00000010408) #22	Gtf3c5 (ENSMOCG00000019295) #23	Cel (ENSMOCG00000016370) #24	Ralgds (ENSMOCG00000018763) #25	Gbgt1 (ENSMOCG00000014087) #26	ENSMOCG00000018447	Pierce1 (ENSMOCG00000020023)	Ppp1r26 (ENSMOCG00000018082)	ENSMOCG00000020298	Olfm1 (ENSMOCG00000022489)	Fcnb (ENSMOCG00000022961)	Col5a1 (ENSMOCG00000015096)	Rxra (ENSMOCG00000007921)	Wdr5 (ENSMOCG00000013826)	Brd3 (ENSMOCG00000008917)	Brd3os (ENSMOCG00000001377)
Northern American deer mouse	MODERN SPECIES	17	ENSPEMG00000018841	Gm13420 (ENSPEMG00000011970)	Rapgef1 (ENSPEMG00000016265)	Med27 (ENSPEMG00000009323)	Ntng2 (ENSPEMG00000011411)	Setx (ENSPEMG00000000875)	Ttf1 (ENSPEMG00000012727)	Cfap77 (ENSPEMG00000013789)	ENSPEMG00000025570	Barhl1 (ENSPEMG00000026128)	Ddx31 (ENSPEMG00000014798)	Gtf3c4 (ENSPEMG00000002789)	Ak8 (ENSPEMG00000018744)	Spaca9 (ENSPEMG00000018153) #20	Tsc1 (ENSPEMG00000018731) #21	Gfi1b (ENSPEMG00000001375) #22	Gtf3c5 (ENSPEMG00000002651) #23	Cel (ENSPEMG00000008308) #24	Ralgds (ENSPEMG00000019230) #25	Gbgt1 (ENSPEMG00000009964) #26	Mrps2 (ENSPEMG00000024330)	Pierce1 (ENSPEMG00000027353)	Ppp1r26 (ENSPEMG00000027038)	ENSPEMG00000009157	Fcnb (ENSPEMG00000016295)	Col5a1 (ENSPEMG00000000663)	Rxra (ENSPEMG00000015777)	Wdr5 (ENSPEMG00000019087)	Brd3 (ENSPEMG00000017759)	Brd3os (ENSPEMG00000003927)	Vav2 (ENSPEMG00000012131)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Mus	ANCESTRAL SPECIES	1	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Mus_A	ANCESTRAL SPECIES		ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01020000230782
Mus_C	ANCESTRAL SPECIES		ENSGT00940000156773	ENSGT01090000260597	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.h #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT00940000159718
Steppe mouse	MODERN SPECIES	3038										ENSMSIG00000020831	Ddx31 (ENSMSIG00000020635)	Gtf3c4 (ENSMSIG00000020618)	Ak8 (ENSMSIG00000020545)	ENSMSIG00000020517 #20	Tsc1 (ENSMSIG00000020389) #21	Gfi1b (ENSMSIG00000020374) #22	Gtf3c5 (ENSMSIG00000020342) #23	Cel (ENSMSIG00000020324) #24	Ralgds (ENSMSIG00000020228) #25	Gbgt1 (ENSMSIG00000020208) #26	Mrps2 (ENSMSIG00000020191)	Pierce1 (ENSMSIG00000020180)	Ppp1r26 (ENSMSIG00000020170)	Olfm1 (ENSMSIG00000020131)	ENSMSIG00000020119	ENSMSIG00000020105	Col5a1 (ENSMSIG00000019992)	ENSMSIG00000019950	Wdr5 (ENSMSIG00000019932)	Brd3 (ENSMSIG00000019895)	Vav2 (ENSMSIG00000019732)
spretus	MODERN SPECIES	11	Coq4 (MGP_SPRETEiJ_G0024287)	Trub2 (MGP_SPRETEiJ_G0024286)	MGP_SPRETEiJ_G0024285	Rapgef1 (MGP_SPRETEiJ_G0024284)	Med27 (MGP_SPRETEiJ_G0024283)	Ntng2 (MGP_SPRETEiJ_G0024282)	Setx (MGP_SPRETEiJ_G0024281)	Ttf1 (MGP_SPRETEiJ_G0024280)	Cfap77 (MGP_SPRETEiJ_G0024279)	Barhl1 (MGP_SPRETEiJ_G0024278)	Ddx31 (MGP_SPRETEiJ_G0024277)	Gtf3c4 (MGP_SPRETEiJ_G0024276)	Ak8 (MGP_SPRETEiJ_G0024275)	Spaca9 (MGP_SPRETEiJ_G0024274) #20	Tsc1 (MGP_SPRETEiJ_G0024273) #21	Gfi1b (MGP_SPRETEiJ_G0024272) #22	Gtf3c5 (MGP_SPRETEiJ_G0024271) #23	Cel (MGP_SPRETEiJ_G0024270) #24	Ralgds (MGP_SPRETEiJ_G0024269) #25	Gbgt1 (MGP_SPRETEiJ_G0024268) #26	Mrps2 (MGP_SPRETEiJ_G0024267)	Pierce1 (MGP_SPRETEiJ_G0024266)	Ppp1r26 (MGP_SPRETEiJ_G0024265)	Olfm1 (MGP_SPRETEiJ_G0024264)	Fcnb (MGP_SPRETEiJ_G0024263)	Col5a1 (MGP_SPRETEiJ_G0024262)	Rxra (MGP_SPRETEiJ_G0024261)	Wdr5 (MGP_SPRETEiJ_G0024260)	Brd3 (MGP_SPRETEiJ_G0024259)	Vav2 (MGP_SPRETEiJ_G0024258)	Sardh (MGP_SPRETEiJ_G0024257)
Mouse	MODERN SPECIES	11	Coq4 (ENSMUSG00000026798)	Trub2 (ENSMUSG00000039826)	Gm13420 (ENSMUSG00000079497)	Rapgef1 (ENSMUSG00000039844)	Med27 (ENSMUSG00000026799)	Ntng2 (ENSMUSG00000035513)	Setx (ENSMUSG00000043535)	Ttf1 (ENSMUSG00000026803)	Cfap77 (ENSMUSG00000079502)	Barhl1 (ENSMUSG00000026805)	Ddx31 (ENSMUSG00000026806)	Gtf3c4 (ENSMUSG00000035666)	Ak8 (ENSMUSG00000026807)	Spaca9 (ENSMUSG00000026809) #20	Tsc1 (ENSMUSG00000026812) #21	Gfi1b (ENSMUSG00000026815) #22	Gtf3c5 (ENSMUSG00000026816) #23	Cel (ENSMUSG00000026818) #24	Ralgds (ENSMUSG00000026821) #25	Gbgt1 (ENSMUSG00000026829) #26	Mrps2 (ENSMUSG00000035772)	Pierce1 (ENSMUSG00000026831)	Ppp1r26 (ENSMUSG00000035829)	Olfm1 (ENSMUSG00000026833)	Fcnb (ENSMUSG00000026835)	Col5a1 (ENSMUSG00000026837)	Rxra (ENSMUSG00000015846)	Wdr5 (ENSMUSG00000026917)	Brd3 (ENSMUSG00000026918)	Brd3os (ENSMUSG00000109946)	Vav2 (ENSMUSG00000009621)
Ryukyu mouse	MODERN SPECIES	11	Coq4 (MGP_CAROLIEiJ_G0023370)	MGP_CAROLIEiJ_G0023369	Trub2 (MGP_CAROLIEiJ_G0023368)	Rapgef1 (MGP_CAROLIEiJ_G0023367)	Med27 (MGP_CAROLIEiJ_G0023366)	Ntng2 (MGP_CAROLIEiJ_G0023365)	Setx (MGP_CAROLIEiJ_G0023364)	Ttf1 (MGP_CAROLIEiJ_G0023363)	Cfap77 (MGP_CAROLIEiJ_G0023362)	Barhl1 (MGP_CAROLIEiJ_G0023361)	Ddx31 (MGP_CAROLIEiJ_G0023360)	Gtf3c4 (MGP_CAROLIEiJ_G0023359)	Ak8 (MGP_CAROLIEiJ_G0023358)	Spaca9 (MGP_CAROLIEiJ_G0023357) #20	Tsc1 (MGP_CAROLIEiJ_G0023356) #21	Gfi1b (MGP_CAROLIEiJ_G0023355) #22	Gtf3c5 (MGP_CAROLIEiJ_G0023354) #23	Cel (MGP_CAROLIEiJ_G0023353) #24	Ralgds (MGP_CAROLIEiJ_G0023352) #25	Gbgt1 (MGP_CAROLIEiJ_G0023351) #26	Mrps2 (MGP_CAROLIEiJ_G0023350)	Pierce1 (MGP_CAROLIEiJ_G0023349)	Ppp1r26 (MGP_CAROLIEiJ_G0023348)	Olfm1 (MGP_CAROLIEiJ_G0023347)	Fcnb (MGP_CAROLIEiJ_G0023346)	Col5a1 (MGP_CAROLIEiJ_G0023345)	Rxra (MGP_CAROLIEiJ_G0023344)	Wdr5 (MGP_CAROLIEiJ_G0023343)	Brd3 (MGP_CAROLIEiJ_G0023342)	Vav2 (MGP_CAROLIEiJ_G0023341)	Sardh (MGP_CAROLIEiJ_G0023340)
Shrew mouse	MODERN SPECIES	16	Coq4 (MGP_PahariEiJ_G0024827)	Trub2 (MGP_PahariEiJ_G0024826)	MGP_PahariEiJ_G0024825	Rapgef1 (MGP_PahariEiJ_G0024824)	Med27 (MGP_PahariEiJ_G0024823)	Ntng2 (MGP_PahariEiJ_G0024822)	Setx (MGP_PahariEiJ_G0024821)	MGP_PahariEiJ_G0024820	Cfap77 (MGP_PahariEiJ_G0024819)	Barhl1 (MGP_PahariEiJ_G0024818)	Ddx31 (MGP_PahariEiJ_G0024817)	Gtf3c4 (MGP_PahariEiJ_G0024816)	Ak8 (MGP_PahariEiJ_G0024815)	Spaca9 (MGP_PahariEiJ_G0024814) #20	Tsc1 (MGP_PahariEiJ_G0024813) #21	MGP_PahariEiJ_G0024812 #22	Gtf3c5 (MGP_PahariEiJ_G0024811) #23	Cel (MGP_PahariEiJ_G0024810) #24	Ralgds (MGP_PahariEiJ_G0024809) #25	Gbgt1 (MGP_PahariEiJ_G0024808) #26	Mrps2 (MGP_PahariEiJ_G0024807)	MGP_PahariEiJ_G0024806	MGP_PahariEiJ_G0024805	Olfm1 (MGP_PahariEiJ_G0024804)	Fcnb (MGP_PahariEiJ_G0024803)	Col5a1 (MGP_PahariEiJ_G0024802)	MGP_PahariEiJ_G0024801	Wdr5 (MGP_PahariEiJ_G0024800)	Brd3 (MGP_PahariEiJ_G0024799)	Vav2 (MGP_PahariEiJ_G0024798)	Sardh (MGP_PahariEiJ_G0024797)
Rat	MODERN SPECIES	13	Trub2 (ENSRNOG00000043189)	LOC102547011 (ENSRNOG00000050262)	Prrt1b (ENSRNOG00000046655)	Rapgef1 (ENSRNOG00000014316)	Med27 (ENSRNOG00000013933)	Ntng2 (ENSRNOG00000013694)	Setx (ENSRNOG00000013491)	Ttf1 (ENSRNOG00000039777)	Cfap77 (ENSRNOG00000028805)	Barhl1 (ENSRNOG00000013209)	Ddx31 (ENSRNOG00000013040)	Gtf3c4 (ENSRNOG00000054725)	Ak8 (ENSRNOG00000012761)	Spaca9 (ENSRNOG00000012697) #20	Tsc1 (ENSRNOG00000011470) #21	Gfi1b (ENSRNOG00000011353) #22	Gtf3c5 (ENSRNOG00000010981) #23	Cel (ENSRNOG00000010406) #24	Ralgds (ENSRNOG00000010219) #25	Mrps2 (ENSRNOG00000010164)	Pierce1 (ENSRNOG00000010152)	Ppp1r26 (ENSRNOG00000027193)	ENSRNOG00000069269	Olfm1 (ENSRNOG00000009862)	Fcnb (ENSRNOG00000009342)	ENSRNOG00000063457	Col5a1 (ENSRNOG00000008749)	Rxra (ENSRNOG00000009446)	Wdr5 (ENSRNOG00000008212)	Brd3 (ENSRNOG00000007681)	Vav2 (ENSRNOG00000007422)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1249	Coq4 (ENSNGAG00000000970)	Trub2 (ENSNGAG00000018679)	ENSNGAG00000019768	Gm13420 (ENSNGAG00000012226)	Rapgef1 (ENSNGAG00000015271)	Med27 (ENSNGAG00000001480)	Ntng2 (ENSNGAG00000000374)	ENSNGAG00000017385	Cfap77 (ENSNGAG00000012081)	Barhl1 (ENSNGAG00000013497)	Ddx31 (ENSNGAG00000020928)	Gtf3c4 (ENSNGAG00000014984)	Ak8 (ENSNGAG00000000659)	Spaca9 (ENSNGAG00000010284) #20	Tsc1 (ENSNGAG00000020617) #21	Gfi1b (ENSNGAG00000003333) #22	Gtf3c5 (ENSNGAG00000013789) #23	Cel (ENSNGAG00000018878) #24	Ralgds (ENSNGAG00000019107) #25	Mrps2 (ENSNGAG00000012946)	Olfm1 (ENSNGAG00000003989)	Fcnb (ENSNGAG00000018239)	Col5a1 (ENSNGAG00000017290)	Rxra (ENSNGAG00000020257)	Wdr5 (ENSNGAG00000013503)	Brd3 (ENSNGAG00000013052)	Vav2 (ENSNGAG00000016873)	Sardh (ENSNGAG00000010560)	Dbh (ENSNGAG00000021288)	Fam163b (ENSNGAG00000019126)	ENSNGAG00000004227
Lesser Egyptian jerboa	MODERN SPECIES	53	Uck1 (ENSJJAG00000020985)	Gm13420 (ENSJJAG00000019008)	Rapgef1 (ENSJJAG00000017691)	Med27 (ENSJJAG00000023911)	Ntng2 (ENSJJAG00000018991)	ENSJJAG00000019967	ENSJJAG00000018182	ENSJJAG00000019991	Cfap77 (ENSJJAG00000012589)	Barhl1 (ENSJJAG00000010393)	Ddx31 (ENSJJAG00000018491)	Gtf3c4 (ENSJJAG00000017992)	Ak8 (ENSJJAG00000002840)	Spaca9 (ENSJJAG00000000472) #20	Tsc1 (ENSJJAG00000021403) #21	Gfi1b (ENSJJAG00000016355) #22	Gtf3c5 (ENSJJAG00000024195) #23	Cel (ENSJJAG00000022364) #24	Ralgds (ENSJJAG00000000521) #25	Gbgt1 (ENSJJAG00000023443) #26	ENSJJAG00000017040	Abo (ENSJJAG00000018846) #29	ENSJJAG00000015760	ENSJJAG00000019000	Surf6 (ENSJJAG00000016287)	Med22 (ENSJJAG00000009802)	Rpl7a (ENSJJAG00000021747)	ENSJJAG00000009729	Surf2 (ENSJJAG00000009756)	Surf4 (ENSJJAG00000010962)	Stkld1 (ENSJJAG00000009934)
Kangaroo rat	MODERN SPECIES	374	Plpp7 (ENSDORG00000007637)	Prrc2b (ENSDORG00000005945)	Pomt1 (ENSDORG00000014415)	Uck1 (ENSDORG00000025358)	Rapgef1 (ENSDORG00000003580)	Med27 (ENSDORG00000014279)	Ntng2 (ENSDORG00000015371)	ENSDORG00000030223	Cfap77 (ENSDORG00000008723)	ENSDORG00000025192	Ddx31 (ENSDORG00000005071)	Gtf3c4 (ENSDORG00000005077)	Ak8 (ENSDORG00000014202)	Spaca9 (ENSDORG00000012261) #20	Tsc1 (ENSDORG00000012262) #21	Gfi1b (ENSDORG00000000342) #22	Gtf3c5 (ENSDORG00000011381) #23	Cel (ENSDORG00000011382) #24	Ralgds (ENSDORG00000011383) #25	Gbgt1 (ENSDORG00000011384) #26	ENSDORG00000025076
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.a.a.a ##27	ENSGT00850000133605	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT01030000236295	ENSGT00940000159211.C
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b.k.b #27	ENSGT01050000244868.a.a.a.a.a.b.k.a #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01090000263159	ENSGT00940000159718
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.b.b.b.a ##27	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01090000263159
Degu	MODERN SPECIES	164	ENSODEG00000016290	PRRT1B (ENSODEG00000016405)	RAPGEF1 (ENSODEG00000015868)	ENSODEG00000017667	NTNG2 (ENSODEG00000015897)	ENSODEG00000016205	ENSODEG00000016387	ENSODEG00000020330	CFAP77 (ENSODEG00000016491)	BARHL1 (ENSODEG00000016066)	DDX31 (ENSODEG00000015685)	GTF3C4 (ENSODEG00000016319)	AK8 (ENSODEG00000016102)	SPACA9 (ENSODEG00000016492) #20	TSC1 (ENSODEG00000015814) #21	GFI1B (ENSODEG00000015968) #22	GTF3C5 (ENSODEG00000015672) #23	ENSODEG00000015962 #24	ENSODEG00000015984	GBGT1 (ENSODEG00000015844) #26	LCN10 (ENSODEG00000015867) ##27	MRPS2 (ENSODEG00000015658)	PIERCE1 (ENSODEG00000016088)	PPP1R26 (ENSODEG00000015787)	OLFM1 (ENSODEG00000016174)	ENSODEG00000020365	FCN1 (ENSODEG00000015722)	COL5A1 (ENSODEG00000016018)	RXRA (ENSODEG00000016500)	ENSODEG00000015612	BRD3 (ENSODEG00000016350)
Long-tailed chinchilla	MODERN SPECIES	220	PRRC2B (ENSCLAG00000006317)	POMT1 (ENSCLAG00000005548)	UCK1 (ENSCLAG00000006376)	RAPGEF1 (ENSCLAG00000007111)	MED27 (ENSCLAG00000010715)	NTNG2 (ENSCLAG00000010283)	SETX (ENSCLAG00000012582)	ENSCLAG00000012676	CFAP77 (ENSCLAG00000012901)	BARHL1 (ENSCLAG00000013082)	DDX31 (ENSCLAG00000008431)	GTF3C4 (ENSCLAG00000009930)	AK8 (ENSCLAG00000010073)	SPACA9 (ENSCLAG00000013602) #20	TSC1 (ENSCLAG00000012367) #21	GFI1B (ENSCLAG00000009914) #22	GTF3C5 (ENSCLAG00000011273) #23	CEL (ENSCLAG00000009166) #24	RALGDS (ENSCLAG00000004723) #25	GBGT1 (ENSCLAG00000005202) #26	ENSCLAG00000005378 #27	ENSCLAG00000005902 #27	SURF6 (ENSCLAG00000004429)	MED22 (ENSCLAG00000004487)	ENSCLAG00000006800	SURF1 (ENSCLAG00000008095)	SURF2 (ENSCLAG00000009277)	SURF4 (ENSCLAG00000010537)	STKLD1 (ENSCLAG00000011038)	REXO4 (ENSCLAG00000006919)	ADAMTS13 (ENSCLAG00000007542)
Guinea pig	MODERN SPECIES	27	POMT1 (ENSCPOG00000020217)	UCK1 (ENSCPOG00000038192)	PRRT1B (ENSCPOG00000022704)	RAPGEF1 (ENSCPOG00000009942)	MED27 (ENSCPOG00000038756)	NTNG2 (ENSCPOG00000024399)	SETX (ENSCPOG00000001492)	ENSCPOG00000021944	CFAP77 (ENSCPOG00000033078)	BARHL1 (ENSCPOG00000025325)	DDX31 (ENSCPOG00000014243)	GTF3C4 (ENSCPOG00000014247)	AK8 (ENSCPOG00000004415)	SPACA9 (ENSCPOG00000004416) #20	TSC1 (ENSCPOG00000004419) #21	GFI1B (ENSCPOG00000026928) #22	GTF3C5 (ENSCPOG00000011139) #23	CEL (ENSCPOG00000002598) #24	RALGDS (ENSCPOG00000005190) #25	GBGT1 (ENSCPOG00000040276) #26	MRPS2 (ENSCPOG00000035320)	PIERCE1 (ENSCPOG00000031034)	PPP1R26 (ENSCPOG00000026849)	OLFM1 (ENSCPOG00000025461)	FCN1 (ENSCPOG00000013876)	COL5A1 (ENSCPOG00000023391)
Naked mole-rat female	MODERN SPECIES	3	POMT1 (ENSHGLG00000016861)	UCK1 (ENSHGLG00000014736)	PRRT1B (ENSHGLG00000014409)	RAPGEF1 (ENSHGLG00000012902)	MED27 (ENSHGLG00000011262)	NTNG2 (ENSHGLG00000012731)	SETX (ENSHGLG00000010385)	ENSHGLG00000013502	CFAP77 (ENSHGLG00000012393)	BARHL1 (ENSHGLG00000011858)	DDX31 (ENSHGLG00000013194)	GTF3C4 (ENSHGLG00000011891)	AK8 (ENSHGLG00000014699)	SPACA9 (ENSHGLG00000014500) #20	TSC1 (ENSHGLG00000012695) #21	GFI1B (ENSHGLG00000012212) #22	GTF3C5 (ENSHGLG00000011110) #23	ENSHGLG00000042543 #24	ENSHGLG00000014091 #24	ENSHGLG00000012657 #25	ENSHGLG00000048599	ENSHGLG00000049287	ENSHGLG00000012186 #27	ENSHGLG00000032443 #27	ENSHGLG00000050663	ENSHGLG00000042072 #27	ENSHGLG00000033381 #28	MRPS2 (ENSHGLG00000011363)	PIERCE1 (ENSHGLG00000010952)	PPP1R26 (ENSHGLG00000049830)	OLFM1 (ENSHGLG00000037158)
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Marmotini	ANCESTRAL SPECIES	1	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Arctic ground squirrel	MODERN SPECIES	156					MED27 (ENSUPAG00010011579)	NTNG2 (ENSUPAG00010011504)	SETX (ENSUPAG00010011465)	TTF1 (ENSUPAG00010011449)	CFAP77 (ENSUPAG00010011437)	BARHL1 (ENSUPAG00010011426)	DDX31 (ENSUPAG00010011408)	ENSUPAG00010011403	AK8 (ENSUPAG00010011364)	SPACA9 (ENSUPAG00010011343) #20	TSC1 (ENSUPAG00010011312) #21	GFI1B (ENSUPAG00010011298) #22	GTF3C5 (ENSUPAG00010011268) #23	CEL (ENSUPAG00010011253) #24	RALGDS (ENSUPAG00010009287) #25	GBGT1 (ENSUPAG00010009274) #26	ENSUPAG00010009264 #27	SURF6 (ENSUPAG00010009255)	MED22 (ENSUPAG00010009242)	ENSUPAG00010009198	SURF1 (ENSUPAG00010009179)	ENSUPAG00010009151	SURF4 (ENSUPAG00010009141)	STKLD1 (ENSUPAG00010009115)	REXO4 (ENSUPAG00010008958)	ADAMTS13 (ENSUPAG00010008908)	ENSUPAG00010008892
Squirrel	MODERN SPECIES	87	PRRC2B (ENSSTOG00000024364)	POMT1 (ENSSTOG00000004011)	UCK1 (ENSSTOG00000004058)	RAPGEF1 (ENSSTOG00000002466)	MED27 (ENSSTOG00000008925)	NTNG2 (ENSSTOG00000010575)	SETX (ENSSTOG00000021600)	TTF1 (ENSSTOG00000007957)	CFAP77 (ENSSTOG00000007973)	BARHL1 (ENSSTOG00000024230)	DDX31 (ENSSTOG00000007985)	ENSSTOG00000004976	AK8 (ENSSTOG00000003440)	SPACA9 (ENSSTOG00000019976) #20	TSC1 (ENSSTOG00000003477) #21	GFI1B (ENSSTOG00000022285) #22	GTF3C5 (ENSSTOG00000023452) #23	CEL (ENSSTOG00000025882) #24	RALGDS (ENSSTOG00000010884) #25	GBGT1 (ENSSTOG00000033831) #26
Alpin marmot	MODERN SPECIES	47	PRRC2B (ENSMMMG00000011717)	POMT1 (ENSMMMG00000011692)	UCK1 (ENSMMMG00000011656)	RAPGEF1 (ENSMMMG00000011529)	MED27 (ENSMMMG00000011517)	NTNG2 (ENSMMMG00000011377)	SETX (ENSMMMG00000011147)	TTF1 (ENSMMMG00000011133)	CFAP77 (ENSMMMG00000011095)	BARHL1 (ENSMMMG00000011083)	ENSMMMG00000011072	GTF3C4 (ENSMMMG00000011057)	AK8 (ENSMMMG00000011029)	SPACA9 (ENSMMMG00000011006) #20	TSC1 (ENSMMMG00000010855) #21	GFI1B (ENSMMMG00000010832) #22	GTF3C5 (ENSMMMG00000010805) #23	CEL (ENSMMMG00000010784) #24	RALGDS (ENSMMMG00000010748) #25	GBGT1 (ENSMMMG00000010723) #26	ENSMMMG00000010709 #27
Eurasian red squirrel	MODERN SPECIES	6	UCK1 (ENSSVLG00005016660)	PRRT1B (ENSSVLG00005016788)	RAPGEF1 (ENSSVLG00005016872)	MED27 (ENSSVLG00005017453)	ENSSVLG00005017582	NTNG2 (ENSSVLG00005017637)	SETX (ENSSVLG00005017731)	ENSSVLG00005017981	CFAP77 (ENSSVLG00005018111)	BARHL1 (ENSSVLG00005018193)	DDX31 (ENSSVLG00005018236)	GTF3C4 (ENSSVLG00005018400)	AK8 (ENSSVLG00005018451)	SPACA9 (ENSSVLG00005018579) #20	TSC1 (ENSSVLG00005018656) #21	GFI1B (ENSSVLG00005018870) #22	GTF3C5 (ENSSVLG00005019188) #23	CEL (ENSSVLG00005019483) #24	RALGDS (ENSSVLG00005019860) #25	GBGT1 (ENSSVLG00005020564) #26	ENSSVLG00005020620 #27	ENSSVLG00005020674 #28	ENSSVLG00005020798 #27	ENSSVLG00005021039 #27	ENSSVLG00005021321 #27	ENSSVLG00005021381 #28	ENSSVLG00005021439	PIERCE1 (ENSSVLG00005021480)	PPP1R26 (ENSSVLG00005021536)	ENSSVLG00005021574	FCN1 (ENSSVLG00005021662)
Lagomorpha	ANCESTRAL SPECIES	119	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148.d #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25
Rabbit	MODERN SPECIES	929															ENSOCUG00000029457 #21	GFI1B (ENSOCUG00000001793) #22	GTF3C5 (ENSOCUG00000011741) #23	CEL (ENSOCUG00000009597) #24
Pika	MODERN SPECIES	2992													ENSOPRG00000000115	ENSOPRG00000000118 #20	TSC1 (ENSOPRG00000000120) #21	GFI1B (ENSOPRG00000000125) #22	GTF3C5 (ENSOPRG00000000130) #23	CEL (ENSOPRG00000000133) #24	RALGDS (ENSOPRG00000000136) #25	ENSOPRG00000000140
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT00940000170286	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.n	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800
Eulipotyphla	ANCESTRAL SPECIES	538																ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24
Hedgehog	MODERN SPECIES	6002																ENSEEUG00000012609 #22	GTF3C5 (ENSEEUG00000012752) #23	ENSEEUG00000012878 #24
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.n	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00950000182858.A.a.a.n #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.n	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Carnivora	ANCESTRAL SPECIES	18	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT01030000236295	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088
Caniformia	ANCESTRAL SPECIES	16	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT01030000236295	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00950000182858.A.a.a.n #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.n	ENSGT00390000014818.o.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.l #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT01030000236295	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00940000171485	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00950000186246	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.l #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26
American black bear	MODERN SPECIES	745									BARHL1 (ENSUAMG00000024812)	DDX31 (ENSUAMG00000024811)	GTF3C4 (ENSUAMG00000024810)	AK8 (ENSUAMG00000024809)	SPACA9 (ENSUAMG00000024808) #20	ENSUAMG00000024807	TSC1 (ENSUAMG00000024563) #21	GFI1B (ENSUAMG00000024547) #22	GTF3C5 (ENSUAMG00000024545) #23	CEL (ENSUAMG00000024544) #24
Polar bear	MODERN SPECIES	214	FAM78A (ENSUMAG00000018578)	PRRC2B (ENSUMAG00000017561)	POMT1 (ENSUMAG00000017298)	UCK1 (ENSUMAG00000017233)	RAPGEF1 (ENSUMAG00000016922)	MED27 (ENSUMAG00000016856)	NTNG2 (ENSUMAG00000016843)	SETX (ENSUMAG00000016729)	TTF1 (ENSUMAG00000016720)	DDX31 (ENSUMAG00000016669)	GTF3C4 (ENSUMAG00000016660)	AK8 (ENSUMAG00000016644)	SPACA9 (ENSUMAG00000016626) #20	ENSUMAG00000016623	TSC1 (ENSUMAG00000016000) #21	GFI1B (ENSUMAG00000015877) #22	GTF3C5 (ENSUMAG00000015869) #23	CEL (ENSUMAG00000015848) #24	RALGDS (ENSUMAG00000015840) #25	GBGT1 (ENSUMAG00000015836) #26	ABO (ENSUMAG00000015832) #29
Giant Panda	MODERN SPECIES	17	ENSAMEG00000016424	ENSAMEG00000023674	RAPGEF1 (ENSAMEG00000016435)	ENSAMEG00000026484	MED27 (ENSAMEG00000023998)	NTNG2 (ENSAMEG00000004056)	SETX (ENSAMEG00000004067)	TTF1 (ENSAMEG00000004093)	CFAP77 (ENSAMEG00000004104)	DDX31 (ENSAMEG00000004120)	BARHL1 (ENSAMEG00000004111)	GTF3C4 (ENSAMEG00000004147)	AK8 (ENSAMEG00000004168)	SPACA9 (ENSAMEG00000004204) #20	TSC1 (ENSAMEG00000004214) #21	GFI1B (ENSAMEG00000004257) #22	GTF3C5 (ENSAMEG00000004275) #23	ENSAMEG00000004305 #24	ENSAMEG00000027963	ENSAMEG00000023915	OLFM1 (ENSAMEG00000010661)	COL5A1 (ENSAMEG00000010741)	ENSAMEG00000030949	RXRA (ENSAMEG00000011124)	WDR5 (ENSAMEG00000011179)	BRD3 (ENSAMEG00000011209)	BRD3OS (ENSAMEG00000027826)	VAV2 (ENSAMEG00000011237)	SARDH (ENSAMEG00000011425)	DBH (ENSAMEG00000011491)	FAM163B (ENSAMEG00000025210)
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.n #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000155193.a.a	ENSGT00940000155193.a.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607.h	ENSGT00940000158379
American mink	MODERN SPECIES	182	POMT1 (ENSNVIG00000018225)	UCK1 (ENSNVIG00000018285)	ENSNVIG00000018309	RAPGEF1 (ENSNVIG00000018310)	MED27 (ENSNVIG00000018350)	NTNG2 (ENSNVIG00000018391)	SETX (ENSNVIG00000018470)	TTF1 (ENSNVIG00000018501)	CFAP77 (ENSNVIG00000018524)	BARHL1 (ENSNVIG00000018540)	DDX31 (ENSNVIG00000018554)	GTF3C4 (ENSNVIG00000018658)	AK8 (ENSNVIG00000018666)	SPACA9 (ENSNVIG00000018697) #20	TSC1 (ENSNVIG00000018736) #21	GFI1B (ENSNVIG00000019359) #22	GTF3C5 (ENSNVIG00000019444) #23	CEL (ENSNVIG00000019455) #24	RALGDS (ENSNVIG00000019470) #25	GBGT1 (ENSNVIG00000019551) #26	ENSNVIG00000019600 #29
Ferret	MODERN SPECIES	218	PRRC2B (ENSMPUG00000012589)	POMT1 (ENSMPUG00000012587)	UCK1 (ENSMPUG00000012585)	PRRT1B (ENSMPUG00000012584)	RAPGEF1 (ENSMPUG00000012577)	NTNG2 (ENSMPUG00000012558)	SETX (ENSMPUG00000012542)	TTF1 (ENSMPUG00000012536)	CFAP77 (ENSMPUG00000012533)	BARHL1 (ENSMPUG00000012529)	DDX31 (ENSMPUG00000012522)	GTF3C4 (ENSMPUG00000012519)	AK8 (ENSMPUG00000012500)	SPACA9 (ENSMPUG00000012496) #20	TSC1 (ENSMPUG00000012491) #21	GFI1B (ENSMPUG00000012489) #22	GTF3C5 (ENSMPUG00000012459) #23	CEL (ENSMPUG00000012440) #24	RALGDS (ENSMPUG00000012429) #25	GBGT1 (ENSMPUG00000012426) #26	ENSMPUG00000012419 #29	SURF6 (ENSMPUG00000012416)	MED22 (ENSMPUG00000012409)	ENSMPUG00000012398	SURF1 (ENSMPUG00000012374)	SURF4 (ENSMPUG00000012354)	STKLD1 (ENSMPUG00000012330)	REXO4 (ENSMPUG00000012315)	ADAMTS13 (ENSMPUG00000012303)	ENSMPUG00000012288	SLC2A6 (ENSMPUG00000012247)
Canidae	ANCESTRAL SPECIES	2	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT00940000159718	ENSGT00940000157589
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT00940000159718	ENSGT00940000157589
Dingo	MODERN SPECIES	327	POMT1 (ENSCAFG00020024466)	UCK1 (ENSCAFG00020024467)	PRRT1B (ENSCAFG00020024468)	RAPGEF1 (ENSCAFG00020024469)	MED27 (ENSCAFG00020024473)	NTNG2 (ENSCAFG00020024478)	SETX (ENSCAFG00020024489)	TTF1 (ENSCAFG00020024520)	CFAP77 (ENSCAFG00020024540)	BARHL1 (ENSCAFG00020024543)	DDX31 (ENSCAFG00020024548)	GTF3C4 (ENSCAFG00020024554)	AK8 (ENSCAFG00020024564)	SPACA9 (ENSCAFG00020024589) #20	TSC1 (ENSCAFG00020024613) #21	GFI1B (ENSCAFG00020024790) #22	GTF3C5 (ENSCAFG00020024793) #23	CEL (ENSCAFG00020024796) #24	RALGDS (ENSCAFG00020024801) #25	GBGT1 (ENSCAFG00020024804) #26	PIERCE1 (ENSCAFG00020024806)	PPP1R26 (ENSCAFG00020024808)	OLFM1 (ENSCAFG00020024815)	ENSCAFG00020024827	ENSCAFG00020024835	ENSCAFG00020024836	ENSCAFG00020024839	RXRA (ENSCAFG00020024843)	WDR5 (ENSCAFG00020024847)	BRD3 (ENSCAFG00020000107)	VAV2 (ENSCAFG00020000584)
Dog	MODERN SPECIES	37	POMT1 (ENSCAFG00845018932)	UCK1 (ENSCAFG00845018761)	PRRT1B (ENSCAFG00845018678)	RAPGEF1 (ENSCAFG00845018101)	MED27 (ENSCAFG00845017764)	NTNG2 (ENSCAFG00845017552)	SETX (ENSCAFG00845017137)	TTF1 (ENSCAFG00845016913)	CFAP77 (ENSCAFG00845016847)	BARHL1 (ENSCAFG00845016811)	DDX31 (ENSCAFG00845016626)	GTF3C4 (ENSCAFG00845016490)	AK8 (ENSCAFG00845016359)	SPACA9 (ENSCAFG00845016272) #20	TSC1 (ENSCAFG00845016069) #21	GFI1B (ENSCAFG00845015938) #22	CEL (ENSCAFG00845013932) #23	RALGDS (ENSCAFG00845013717) #25	GBGT1 (ENSCAFG00845013604) #26	ENSCAFG00845013515	ENSCAFG00845013483	ENSCAFG00845013336	FCN2 (ENSCAFG00845013263)	COL5A1 (ENSCAFG00845012744)	RXRA (ENSCAFG00845012191)	WDR5 (ENSCAFG00845011994)	BRD3 (ENSCAFG00845011912)	VAV2 (ENSCAFG00845011337)	SARDH (ENSCAFG00845010972)	DBH (ENSCAFG00845010802)	FAM163B (ENSCAFG00845010779)
Red fox	MODERN SPECIES	77	POMT1 (ENSVVUG00000028093)	UCK1 (ENSVVUG00000028334)	RAPGEF1 (ENSVVUG00000028347)	ENSVVUG00000028373	MED27 (ENSVVUG00000028375)	NTNG2 (ENSVVUG00000028377)	SETX (ENSVVUG00000028381)	TTF1 (ENSVVUG00000028389)	CFAP77 (ENSVVUG00000028394)	BARHL1 (ENSVVUG00000028398)	DDX31 (ENSVVUG00000028399)	GTF3C4 (ENSVVUG00000028407)	AK8 (ENSVVUG00000028418)	SPACA9 (ENSVVUG00000028425) #20	TSC1 (ENSVVUG00000028433) #21	GFI1B (ENSVVUG00000028440) #22	GTF3C5 (ENSVVUG00000028445) #23	CEL (ENSVVUG00000028454) #24	RALGDS (ENSVVUG00000028470) #25	GBGT1 (ENSVVUG00000028491) #26
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000159211.C	ENSGT01030000236295	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088	ENSGT00940000159718
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088	ENSGT00940000159718	ENSGT00940000157589
Tiger	MODERN SPECIES	121	FAM78A (ENSPTIG00000017998)	ENSPTIG00000006604	PRRC2B (ENSPTIG00000019108)	ENSPTIG00000009105	UCK1 (ENSPTIG00000011425)	RAPGEF1 (ENSPTIG00000014173)	MED27 (ENSPTIG00000019985)	SETX (ENSPTIG00000021101)	ENSPTIG00000007300	CFAP77 (ENSPTIG00000008549)	BARHL1 (ENSPTIG00000010132)	GTF3C4 (ENSPTIG00000013338)	AK8 (ENSPTIG00000013682)	SPACA9 (ENSPTIG00000015397) #20	TSC1 (ENSPTIG00000016626) #21	ENSPTIG00000021544 #22	GTF3C5 (ENSPTIG00000005918) #23	CEL (ENSPTIG00000012207) #24	RALGDS (ENSPTIG00000013741) #25	GBGT1 (ENSPTIG00000020735) #26
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088	ENSGT00940000159718	ENSGT00940000157589
leopard	MODERN SPECIES	83	PRRC2B (ENSPPRG00000001024)	POMT1 (ENSPPRG00000004061)	UCK1 (ENSPPRG00000005312)	PRRT1B (ENSPPRG00000005555)	RAPGEF1 (ENSPPRG00000009403)	MED27 (ENSPPRG00000011635)	NTNG2 (ENSPPRG00000012075)	SETX (ENSPPRG00000012867)	ENSPPRG00000013458	CFAP77 (ENSPPRG00000013940)	BARHL1 (ENSPPRG00000014315)	GTF3C4 (ENSPPRG00000023751)	AK8 (ENSPPRG00000023284)	SPACA9 (ENSPPRG00000000325) #20	TSC1 (ENSPPRG00000002602) #21	GFI1B (ENSPPRG00000006981) #22	GTF3C5 (ENSPPRG00000010449) #23	CEL (ENSPPRG00000011888) #24	RALGDS (ENSPPRG00000000852) #25	GBGT1 (ENSPPRG00000001434) #26
lion	MODERN SPECIES	13	PRRC2B (ENSPLOG00000008611)	POMT1 (ENSPLOG00000008262)	UCK1 (ENSPLOG00000008110)	RAPGEF1 (ENSPLOG00000007743)	MED27 (ENSPLOG00000007533)	NTNG2 (ENSPLOG00000022306)	SETX (ENSPLOG00000022285)	TTF1 (ENSPLOG00000022265)	CFAP77 (ENSPLOG00000022256)	BARHL1 (ENSPLOG00000022248)	DDX31 (ENSPLOG00000022208)	GTF3C4 (ENSPLOG00000022189)	AK8 (ENSPLOG00000022172)	SPACA9 (ENSPLOG00000022149) #20	TSC1 (ENSPLOG00000022121) #21	GFI1B (ENSPLOG00000022077) #22	GTF3C5 (ENSPLOG00000022039) #23	CEL (ENSPLOG00000021970) #24	RALGDS (ENSPLOG00000021773) #25	GBGT1 (ENSPLOG00000021682) #26	MRPS2 (ENSPLOG00000021664)	PIERCE1 (ENSPLOG00000021652)	PPP1R26 (ENSPLOG00000021642)	OLFM1 (ENSPLOG00000021622)	COL5A1 (ENSPLOG00000021178)	RXRA (ENSPLOG00000021054)	WDR5 (ENSPLOG00000020988)	BRD3 (ENSPLOG00000020921)	BRD3OS (ENSPLOG00000020892)	VAV2 (ENSPLOG00000020836)	SARDH (ENSPLOG00000020722)
Cat	MODERN SPECIES	244	POMT1 (ENSFCAG00000008385)	UCK1 (ENSFCAG00000032302)	PRRT1B (ENSFCAG00000034542)	RAPGEF1 (ENSFCAG00000007100)	MED27 (ENSFCAG00000007101)	NTNG2 (ENSFCAG00000028886)	SETX (ENSFCAG00000007102)	TTF1 (ENSFCAG00000039920)	CFAP77 (ENSFCAG00000024893)	BARHL1 (ENSFCAG00000007105)	DDX31 (ENSFCAG00000007106)	GTF3C4 (ENSFCAG00000023003)	AK8 (ENSFCAG00000023153)	SPACA9 (ENSFCAG00000007110) #20	TSC1 (ENSFCAG00000007112) #21	GFI1B (ENSFCAG00000027147) #22	GTF3C5 (ENSFCAG00000007113) #23	CEL (ENSFCAG00000024301) #24	RALGDS (ENSFCAG00000007114) #25	GBGT1 (ENSFCAG00000024387) #26	MRPS2 (ENSFCAG00000000137)	PIERCE1 (ENSFCAG00000037561)	PPP1R26 (ENSFCAG00000044731)	OLFM1 (ENSFCAG00000023543)	COL5A1 (ENSFCAG00000040298)	ENSFCAG00000049773	RXRA (ENSFCAG00000002431)	WDR5 (ENSFCAG00000005712)	ENSFCAG00000052020	BRD3 (ENSFCAG00000005710)	VAV2 (ENSFCAG00000011529)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00950000182858.A.a.a.n #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Equus	ANCESTRAL SPECIES	30	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00950000182858.A.a.a.n #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Horse	MODERN SPECIES	17	PRRT1B (ENSECAG00000043912)	ENSECAG00000048983	RAPGEF1 (ENSECAG00000018775)	MED27 (ENSECAG00000022727)	NTNG2 (ENSECAG00000008808)	SETX (ENSECAG00000012019)	TTF1 (ENSECAG00000026979)	ENSECAG00000035265	CFAP77 (ENSECAG00000020370)	DDX31 (ENSECAG00000005146)	BARHL1 (ENSECAG00000021032)	GTF3C4 (ENSECAG00000019248)	AK8 (ENSECAG00000006330)	SPACA9 (ENSECAG00000008353) #20	TSC1 (ENSECAG00000009564) #21	GFI1B (ENSECAG00000008127) #22	GTF3C5 (ENSECAG00000008807) #23	CEL (ENSECAG00000013218) #24	RALGDS (ENSECAG00000021996) #25	GBGT1 (ENSECAG00000012442) #26	ENSECAG00000048478	ENSECAG00000058413	ABO (ENSECAG00000014463) #29	SURF6 (ENSECAG00000021229)	MED22 (ENSECAG00000004668)	RPL7A (ENSECAG00000008548)	SURF1 (ENSECAG00000039267)	SURF2 (ENSECAG00000020897)	SURF4 (ENSECAG00000031341)	STKLD1 (ENSECAG00000022240)	REXO4 (ENSECAG00000007896)
Donkey	MODERN SPECIES	1	ENSEASG00005009581	PRRT1B (ENSEASG00005027000)	RAPGEF1 (ENSEASG00005009606)	ENSEASG00005025052	ENSEASG00005029732	NTNG2 (ENSEASG00005009813)	SETX (ENSEASG00005009822)	TTF1 (ENSEASG00005009833)	CFAP77 (ENSEASG00005009838)	BARHL1 (ENSEASG00005009842)	DDX31 (ENSEASG00005009845)	GTF3C4 (ENSEASG00005009846)	AK8 (ENSEASG00005009847)	SPACA9 (ENSEASG00005009848) #20	TSC1 (ENSEASG00005009849) #21	GFI1B (ENSEASG00005009852) #22	GTF3C5 (ENSEASG00005009855) #23	CEL (ENSEASG00005009861) #24	RALGDS (ENSEASG00005009872) #25	GBGT1 (ENSEASG00005009878) #26	ABO (ENSEASG00005038246) #29	ENSEASG00005031108 #29	SURF6 (ENSEASG00005024763)	MED22 (ENSEASG00005027340)	ENSEASG00005009897	SURF1 (ENSEASG00005009904)	SURF2 (ENSEASG00005030289)	SURF4 (ENSEASG00005009909)	STKLD1 (ENSEASG00005009912)	REXO4 (ENSEASG00005026586)	ADAMTS13 (ENSEASG00005009916)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Megabat	MODERN SPECIES	353								TTF1 (ENSPVAG00000002038)	CFAP77 (ENSPVAG00000002042)	BARHL1 (ENSPVAG00000002046)	DDX31 (ENSPVAG00000002050)	GTF3C4 (ENSPVAG00000002052)	AK8 (ENSPVAG00000002053)	SPACA9 (ENSPVAG00000002055) #20	TSC1 (ENSPVAG00000002056) #21	ENSPVAG00000002058 #22
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z.b #25	ENSGT00950000182858.A.b.b #26	ENSGT00950000182858.A.a.a.m #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Microbat	MODERN SPECIES	1498											SETX (ENSMLUG00000004836)	ENSMLUG00000004861	DDX31 (ENSMLUG00000011507)	GTF3C4 (ENSMLUG00000011547)	TSC1 (ENSMLUG00000006647) #21	GFI1B (ENSMLUG00000006673) #22	GTF3C5 (ENSMLUG00000006684) #23	ENSMLUG00000026415 #24	ENSMLUG00000027198 #24	ENSMLUG00000006710 #24	ENSMLUG00000029545 #24	RALGDS (ENSMLUG00000017466) #25
Greater horseshoe bat	MODERN SPECIES	3	POMT1 (ENSRFEG00010011466)	UCK1 (ENSRFEG00010011586)	PRRT1B (ENSRFEG00010011742)	RAPGEF1 (ENSRFEG00010011862)	MED27 (ENSRFEG00010012877)	NTNG2 (ENSRFEG00010013000)	SETX (ENSRFEG00010013062)	TTF1 (ENSRFEG00010013126)	CFAP77 (ENSRFEG00010013175)	BARHL1 (ENSRFEG00010013240)	DDX31 (ENSRFEG00010013285)	GTF3C4 (ENSRFEG00010013327)	AK8 (ENSRFEG00010013382)	SPACA9 (ENSRFEG00010013459) #20	TSC1 (ENSRFEG00010013563) #21	GFI1B (ENSRFEG00010013771) #22	GTF3C5 (ENSRFEG00010013965) #23	CEL (ENSRFEG00010014276) #24	RALGDS (ENSRFEG00010014681) #25	GBGT1 (ENSRFEG00010014887) #26	ABO (ENSRFEG00010014997) #29	SURF6 (ENSRFEG00010015035)	MED22 (ENSRFEG00010015089)	ENSRFEG00010015226	SURF1 (ENSRFEG00010015383)	SURF2 (ENSRFEG00010015562)	SURF4 (ENSRFEG00010015631)	STKLD1 (ENSRFEG00010015753)	REXO4 (ENSRFEG00010016265)	ENSRFEG00010016293	ENSRFEG00010016345
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800
Suina	ANCESTRAL SPECIES	37	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.a.b #28	ENSGT00950000182858.A.a.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Pig	MODERN SPECIES		POMT1 (ENSSSCG00000005716)	UCK1 (ENSSSCG00000005717)	PRRT1B (ENSSSCG00000031465)	RAPGEF1 (ENSSSCG00000005719)	MED27 (ENSSSCG00000005720)	NTNG2 (ENSSSCG00000005723)	SETX (ENSSSCG00000005724)	TTF1 (ENSSSCG00000005725)	CFAP77 (ENSSSCG00000005727)	BARHL1 (ENSSSCG00000005730)	DDX31 (ENSSSCG00000005729)	GTF3C4 (ENSSSCG00000005731)	AK8 (ENSSSCG00000039188)	SPACA9 (ENSSSCG00000022250) #20	TSC1 (ENSSSCG00000046003) #21	GFI1B (ENSSSCG00000005737) #22	ENSSSCG00000032110	CEL (ENSSSCG00000028671) #24	RALGDS (ENSSSCG00000005738) #25	GBGT1 (ENSSSCG00000031532) #26	ENSSSCG00000043049 #27	ENSSSCG00000035964 #28	SURF6 (ENSSSCG00000032106)	MED22 (ENSSSCG00000031941)	ENSSSCG00000035904	ENSSSCG00000043356	SURF1 (ENSSSCG00000035727)	SURF2 (ENSSSCG00000038459)	SURF4 (ENSSSCG00000040710)	STKLD1 (ENSSSCG00000031407)	REXO4 (ENSSSCG00000023173)
Chacoan peccary	MODERN SPECIES	887	PRRC2B (ENSCWAG00000006791)	POMT1 (ENSCWAG00000006722)	UCK1 (ENSCWAG00000006666)	RAPGEF1 (ENSCWAG00000006397)	MED27 (ENSCWAG00000006239)	NTNG2 (ENSCWAG00000006197)	SETX (ENSCWAG00000006034)	TTF1 (ENSCWAG00000005976)	CFAP77 (ENSCWAG00000005915)	BARHL1 (ENSCWAG00000005894)	DDX31 (ENSCWAG00000005734)	GTF3C4 (ENSCWAG00000005692)	AK8 (ENSCWAG00000005678)	SPACA9 (ENSCWAG00000005647) #20	TSC1 (ENSCWAG00000005535) #21	GFI1B (ENSCWAG00000005093) #22	GTF3C5 (ENSCWAG00000005017) #23	CEL (ENSCWAG00000004938) #24	RALGDS (ENSCWAG00000004098) #25	GBGT1 (ENSCWAG00000003939) #26	ENSCWAG00000003886 #27	LCN1 (ENSCWAG00000003847) #28	ENSCWAG00000003813 ##27	MRPS2 (ENSCWAG00000003786)	PIERCE1 (ENSCWAG00000006500)	PPP1R26 (ENSCWAG00000006492)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088	ENSGT00940000159718
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01060000249362	ENSGT00940000159718
Cetacea	ANCESTRAL SPECIES	9	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00910000147033	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01060000249362
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Narwhal	MODERN SPECIES	312	PRRC2B (ENSMMNG00015014308)	POMT1 (ENSMMNG00015014401)	UCK1 (ENSMMNG00015014428)	PRRT1B (ENSMMNG00015014448)	RAPGEF1 (ENSMMNG00015014496)	MED27 (ENSMMNG00015014609)	NTNG2 (ENSMMNG00015014639)	SETX (ENSMMNG00015014662)	TTF1 (ENSMMNG00015014693)	CFAP77 (ENSMMNG00015014748)	BARHL1 (ENSMMNG00015014770)	DDX31 (ENSMMNG00015014795)	GTF3C4 (ENSMMNG00015014850)	AK8 (ENSMMNG00015014866)	TSC1 (ENSMMNG00015014899) #21	GFI1B (ENSMMNG00015014939) #22	GTF3C5 (ENSMMNG00015014986) #23	CEL (ENSMMNG00015015072) #24	RALGDS (ENSMMNG00015015227) #25	GBGT1 (ENSMMNG00015015453) #26	MRPS2 (ENSMMNG00015015534)	PIERCE1 (ENSMMNG00015015543)	PPP1R26 (ENSMMNG00015015550)	ENSMMNG00015015555	OLFM1 (ENSMMNG00015015563)	FCN1 (ENSMMNG00015014173)	COL5A1 (ENSMMNG00015014221)	RXRA (ENSMMNG00015014359)	WDR5 (ENSMMNG00015014388)	BRD3 (ENSMMNG00015014410)	ENSMMNG00015014467
Beluga whale	MODERN SPECIES	19	POMT1 (ENSDLEG00000005160)	UCK1 (ENSDLEG00000005153)	PRRT1B (ENSDLEG00000005148)	RAPGEF1 (ENSDLEG00000005079)	MED27 (ENSDLEG00000005036)	NTNG2 (ENSDLEG00000005024)	SETX (ENSDLEG00000005002)	TTF1 (ENSDLEG00000004956)	CFAP77 (ENSDLEG00000004940)	BARHL1 (ENSDLEG00000004938)	DDX31 (ENSDLEG00000004925)	GTF3C4 (ENSDLEG00000004892)	AK8 (ENSDLEG00000004877)	ENSDLEG00000004857 #20	TSC1 (ENSDLEG00000004840) #21	GFI1B (ENSDLEG00000004827) #22	GTF3C5 (ENSDLEG00000004811) #23	CEL (ENSDLEG00000004676) #24	RALGDS (ENSDLEG00000004623) #25	ENSDLEG00000004604	MRPS2 (ENSDLEG00000004586)	CUNH9orf116 (ENSDLEG00000004579)	PPP1R26 (ENSDLEG00000004572)	ENSDLEG00000004532	ENSDLEG00000004526	ENSDLEG00000004521	ENSDLEG00000004514	ENSDLEG00000004503	COL5A1 (ENSDLEG00000004399)	RXRA (ENSDLEG00000004352)	WDR5 (ENSDLEG00000004313)
Vaquita	MODERN SPECIES	17	POMT1 (ENSPSNG00000011380)	UCK1 (ENSPSNG00000011299)	PRRT1B (ENSPSNG00000011276)	RAPGEF1 (ENSPSNG00000010810)	MED27 (ENSPSNG00000010671)	NTNG2 (ENSPSNG00000010573)	SETX (ENSPSNG00000010504)	TTF1 (ENSPSNG00000010461)	CFAP77 (ENSPSNG00000010381)	BARHL1 (ENSPSNG00000010335)	DDX31 (ENSPSNG00000010312)	GTF3C4 (ENSPSNG00000010263)	AK8 (ENSPSNG00000010223)	ENSPSNG00000010143 #20	TSC1 (ENSPSNG00000009941) #21	GFI1B (ENSPSNG00000009574) #22	GTF3C5 (ENSPSNG00000009435) #23	CEL (ENSPSNG00000009284) #24	RALGDS (ENSPSNG00000009004) #25	GBGT1 (ENSPSNG00000008899) #26	MRPS2 (ENSPSNG00000008854)	PIERCE1 (ENSPSNG00000008821)	PPP1R26 (ENSPSNG00000008807)	ENSPSNG00000008765	OLFM1 (ENSPSNG00000009427)	ENSPSNG00000009306	ENSPSNG00000009178	COL5A1 (ENSPSNG00000008774)	RXRA (ENSPSNG00000008516)	WDR5 (ENSPSNG00000008438)	BRD3 (ENSPSNG00000008397)
Dolphin	MODERN SPECIES	1613													AK8 (ENSTTRG00000014370)	ENSTTRG00000014386 #20	TSC1 (ENSTTRG00000014398) #21	GFI1B (ENSTTRG00000014423) #22	GTF3C5 (ENSTTRG00000014428) #23	CEL (ENSTTRG00000014433) #24	RALGDS (ENSTTRG00000014436) #25	GBGT1 (ENSTTRG00000014438) #26
Sperm whale	MODERN SPECIES	4	ENSPCTG00005008296	PRRC2B (ENSPCTG00005008198)	POMT1 (ENSPCTG00005008076)	UCK1 (ENSPCTG00005008011)	RAPGEF1 (ENSPCTG00005005974)	SETX (ENSPCTG00005005641)	ENSPCTG00005005608	ENSPCTG00005005572	ENSPCTG00005005551	ENSPCTG00005005541	DDX31 (ENSPCTG00005005522)	GTF3C4 (ENSPCTG00005005484)	AK8 (ENSPCTG00005005459)	ENSPCTG00005005432 #20	TSC1 (ENSPCTG00005005336) #21	GFI1B (ENSPCTG00005005104) #22	MRPS2 (ENSPCTG00005005046)	C13H9orf116 (ENSPCTG00005005022)	ENSPCTG00005004983	OLFM1 (ENSPCTG00005004913)	FCN1 (ENSPCTG00005004867)	COL5A1 (ENSPCTG00005004630)	WDR5 (ENSPCTG00005004552)	RXRA (ENSPCTG00005004526)	BRD3 (ENSPCTG00005004497)	BRD3OS (ENSPCTG00005004490)	VAV2 (ENSPCTG00005004328)	DBH (ENSPCTG00005017629)	FAM163B (ENSPCTG00005017596)	ADAMTSL2 (ENSPCTG00005017407)	MYMK (ENSPCTG00005017370)
Blue whale	MODERN SPECIES	17	POMT1 (ENSBMSG00010020652)	UCK1 (ENSBMSG00010020674)	RAPGEF1 (ENSBMSG00010020935)	ENSBMSG00010021721	MED27 (ENSBMSG00010021722)	NTNG2 (ENSBMSG00010021726)	SETX (ENSBMSG00010021728)	TTF1 (ENSBMSG00010021732)	CFAP77 (ENSBMSG00010021736)	BARHL1 (ENSBMSG00010021739)	DDX31 (ENSBMSG00010021741)	GTF3C4 (ENSBMSG00010021744)	AK8 (ENSBMSG00010021745)	SPACA9 (ENSBMSG00010021749) #20	TSC1 (ENSBMSG00010021751) #21	GFI1B (ENSBMSG00010021763) #22	GTF3C5 (ENSBMSG00010021786) #23	CEL (ENSBMSG00010021795) #24	RALGDS (ENSBMSG00010021812) #25	GBGT1 (ENSBMSG00010021845) #26	MRPS2 (ENSBMSG00010021868)	PIERCE1 (ENSBMSG00010021871)	PPP1R26 (ENSBMSG00010021874)	ENSBMSG00010021875	OLFM1 (ENSBMSG00010021879)	ENSBMSG00010021886	ENSBMSG00010021891	ENSBMSG00010021897	RXRA (ENSBMSG00010021899)	WDR5 (ENSBMSG00010004269)	BRD3 (ENSBMSG00010004279)
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Caprinae	ANCESTRAL SPECIES	27	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Goat	MODERN SPECIES	2	PRRC2B (ENSCHIG00000019708)	POMT1 (ENSCHIG00000024383)	UCK1 (ENSCHIG00000011080)	RAPGEF1 (ENSCHIG00000017236)	MED27 (ENSCHIG00000022460)	NTNG2 (ENSCHIG00000013952)	SETX (ENSCHIG00000020740)	TTF1 (ENSCHIG00000016211)	CFAP77 (ENSCHIG00000022706)	BARHL1 (ENSCHIG00000024799)	DDX31 (ENSCHIG00000020011)	GTF3C4 (ENSCHIG00000006949)	AK8 (ENSCHIG00000026374)	SPACA9 (ENSCHIG00000011365) #20	TSC1 (ENSCHIG00000018208) #21	GFI1B (ENSCHIG00000026837) #22	GTF3C5 (ENSCHIG00000024162) #23	CEL (ENSCHIG00000025027) #24	RALGDS (ENSCHIG00000015793) #25	GBGT1 (ENSCHIG00000011247) #26	ENSCHIG00000023482 #27	PAEP (ENSCHIG00000014239) ##27	GLT6D1 (ENSCHIG00000019179) ##26	ENSCHIG00000025929 ##27	ENSCHIG00000018572	KCNT1 (ENSCHIG00000007884)	CAMSAP1 (ENSCHIG00000016116)	UBAC1 (ENSCHIG00000018504)	NACC2 (ENSCHIG00000007966)	TMEM250 (ENSCHIG00000010273)	LHX3 (ENSCHIG00000024793)
Rambouillet Sheep	MODERN SPECIES	19	PLPP7 (ENSOARG00020000737)	PRRC2B (ENSOARG00020000660)	POMT1 (ENSOARG00020000540)	UCK1 (ENSOARG00020000489)	RAPGEF1 (ENSOARG00020000271)	MED27 (ENSOARG00020000195)	NTNG2 (ENSOARG00020000152)	TTF1 (ENSOARG00020017929)	CFAP77 (ENSOARG00020017851)	BARHL1 (ENSOARG00020017803)	DDX31 (ENSOARG00020017578)	GTF3C4 (ENSOARG00020017513)	AK8 (ENSOARG00020017399)	SPACA9 (ENSOARG00020017323) #20	TSC1 (ENSOARG00020017058) #21	GFI1B (ENSOARG00020016632) #22	GTF3C5 (ENSOARG00020016366) #23	CEL (ENSOARG00020016231) #24	RALGDS (ENSOARG00020014951) #25	GBGT1 (ENSOARG00020014323) #26	ENSOARG00020014156 #27	ENSOARG00020013569 ##27	GLT6D1 (ENSOARG00020013449) ##26	ENSOARG00020013271 ##27	KCNT1 (ENSOARG00020005353)	CAMSAP1 (ENSOARG00020004888)	PAEP (ENSOARG00020004839) ##27	UBAC1 (ENSOARG00020004817)	NACC2 (ENSOARG00020004779)	TMEM250 (ENSOARG00020004761)	LHX3 (ENSOARG00020004662)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT01000000214793	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT01100000263569.a.a.b	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Bos	ANCESTRAL SPECIES	5	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT01000000214793	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT01100000263569.a.a.b	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT01100000263569.a.a.b	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707	ENSGT00940000160316
Wild yak	MODERN SPECIES	1456									ENSBMUG00000003674	BARHL1 (ENSBMUG00000003728)	DDX31 (ENSBMUG00000003829)	GTF3C4 (ENSBMUG00000003856)	AK8 (ENSBMUG00000003890)	SPACA9 (ENSBMUG00000003927) #20	TSC1 (ENSBMUG00000004198) #21	GFI1B (ENSBMUG00000004554) #22	GTF3C5 (ENSBMUG00000004687) #23	CEL (ENSBMUG00000004733) #24	RALGDS (ENSBMUG00000004883) #25	GBGT1 (ENSBMUG00000004978) #26
Domestic yak	MODERN SPECIES	28	PRRC2B (ENSBGRG00000012453)	POMT1 (ENSBGRG00000012652)	UCK1 (ENSBGRG00000012820)	RAPGEF1 (ENSBGRG00000013023)	MED27 (ENSBGRG00000013975)	NTNG2 (ENSBGRG00000014300)	SETX (ENSBGRG00000014400)	TTF1 (ENSBGRG00000014543)	CFAP77 (ENSBGRG00000014588)	BARHL1 (ENSBGRG00000014646)	DDX31 (ENSBGRG00000014697)	GTF3C4 (ENSBGRG00000015208)	AK8 (ENSBGRG00000015381)	SPACA9 (ENSBGRG00000015688) #20	ENSBGRG00000015798 #21	GFI1B (ENSBGRG00000015879) #22	GTF3C5 (ENSBGRG00000016199) #23	CEL (ENSBGRG00000016811) #24	RALGDS (ENSBGRG00000016946) #25	GBGT1 (ENSBGRG00000018685) #26	ENSBGRG00000018826 #27	ENSBGRG00000018918 ##27	GLT6D1 (ENSBGRG00000019100) ##26	ENSBGRG00000019170 ##27	ENSBGRG00000019236	KCNT1 (ENSBGRG00000019473)	CAMSAP1 (ENSBGRG00000024559)	UBAC1 (ENSBGRG00000024753)	NACC2 (ENSBGRG00000024826)	ENSBGRG00000024840	LHX3 (ENSBGRG00000024850)
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT01000000214793	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT01100000263569.a.a.a.a	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b #27	ENSGT01050000244868.a.a.a.b.b.d ##27	ENSGT01050000244868.a.a.a.b.b.c ##27	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b ##27	ENSGT00390000000656	ENSGT00940000156880	ENSGT00950000182975.a.a.b	ENSGT00390000014658	ENSGT00940000159244	ENSGT00560000078707
Hybrid Bos Indicus	MODERN SPECIES	2	UCK1 (ENSBIXG00005012183)	PRRT1B (ENSBIXG00005012138)	RAPGEF1 (ENSBIXG00005012047)	MED27 (ENSBIXG00005011937)	NTNG2 (ENSBIXG00005011889)	SETX (ENSBIXG00005011828)	TTF1 (ENSBIXG00005011724)	ENSBIXG00005011692	CFAP77 (ENSBIXG00005011671)	BARHL1 (ENSBIXG00005011650)	DDX31 (ENSBIXG00005011618)	GTF3C4 (ENSBIXG00005011513)	AK8 (ENSBIXG00005001111)	SPACA9 (ENSBIXG00005011449) #20	TSC1 (ENSBIXG00005011396) #21	GFI1B (ENSBIXG00005011310) #22	GTF3C5 (ENSBIXG00005011251) #23	CEL (ENSBIXG00005011145) #24	RALGDS (ENSBIXG00005011070) #25	GBGT1 (ENSBIXG00005010899) #26	ENSBIXG00005010804	ENSBIXG00005010799 #27	ENSBIXG00005010741 ##27	ENSBIXG00005010722 ##27	GLT6D1 (ENSBIXG00005010707) ##26	ENSBIXG00005000638 ##27	ENSBIXG00005010677	KCNT1 (ENSBIXG00005010453)	CAMSAP1 (ENSBIXG00005008646)	UBAC1 (ENSBIXG00005008614)	NACC2 (ENSBIXG00005008585)
Cow	MODERN SPECIES	2	PRRT1B (ENSBTAG00000052831)	RAPGEF1 (ENSBTAG00000020791)	MED27 (ENSBTAG00000000382)	ENSBTAG00000053838	NTNG2 (ENSBTAG00000007235)	SETX (ENSBTAG00000024822)	TTF1 (ENSBTAG00000018710)	ENSBTAG00000023697	CFAP77 (ENSBTAG00000019254)	BARHL1 (ENSBTAG00000023801)	DDX31 (ENSBTAG00000003530)	GTF3C4 (ENSBTAG00000004091)	AK8 (ENSBTAG00000004092)	SPACA9 (ENSBTAG00000005189) #20	TSC1 (ENSBTAG00000005190) #21	GFI1B (ENSBTAG00000012772) #22	GTF3C5 (ENSBTAG00000021373) #23	CEL (ENSBTAG00000007486) #24	RALGDS (ENSBTAG00000004194) #25	GBGT1 (ENSBTAG00000030319) #26	ENSBTAG00000000893 #27	ENSBTAG00000048091 ##27	PAEP (ENSBTAG00000014678) ##27	GLT6D1 (ENSBTAG00000020249) ##26	LCN9 (ENSBTAG00000038972) ##27	KCNT1 (ENSBTAG00000018975)	CAMSAP1 (ENSBTAG00000006008)	UBAC1 (ENSBTAG00000039851)	NACC2 (ENSBTAG00000020490)	TMEM250 (ENSBTAG00000046939)	LHX3 (ENSBTAG00000011124)
American bison	MODERN SPECIES	3289	PRRT1B (ENSBBBG00000009687)	RAPGEF1 (ENSBBBG00000009731)	MED27 (ENSBBBG00000009741)	ENSBBBG00000009748	NTNG2 (ENSBBBG00000009755)	SETX (ENSBBBG00000009759)	ENSBBBG00000009760	ENSBBBG00000007875	CFAP77 (ENSBBBG00000009763)	BARHL1 (ENSBBBG00000001614)	DDX31 (ENSBBBG00000009774)	ENSBBBG00000009777	AK8 (ENSBBBG00000009783)	ENSBBBG00000009785 #20	TSC1 (ENSBBBG00000009854) #21	GFI1B (ENSBBBG00000009900) #22	GTF3C5 (ENSBBBG00000009918) #23	CEL (ENSBBBG00000009935) #24	RALGDS (ENSBBBG00000001671) #25	GBGT1 (ENSBBBG00000001685) #26	ENSBBBG00000009981 #27	ENSBBBG00000009984 ##27	ENSBBBG00000010016 ##27	GLT6D1 (ENSBBBG00000010031) ##26	ENSBBBG00000010035 ##27
Siberian musk deer	MODERN SPECIES	1178	PRRC2B (ENSMMSG00000008368)	POMT1 (ENSMMSG00000008544)	UCK1 (ENSMMSG00000008624)	RAPGEF1 (ENSMMSG00000008741)	MED27 (ENSMMSG00000009213)	NTNG2 (ENSMMSG00000009330)	SETX (ENSMMSG00000009473)	ENSMMSG00000009527	CFAP77 (ENSMMSG00000009596)	BARHL1 (ENSMMSG00000009623)	DDX31 (ENSMMSG00000009648)	GTF3C4 (ENSMMSG00000009716)	AK8 (ENSMMSG00000009755)	SPACA9 (ENSMMSG00000009874) #20	TSC1 (ENSMMSG00000009923) #21	GFI1B (ENSMMSG00000010068) #22	GTF3C5 (ENSMMSG00000010368) #23	CEL (ENSMMSG00000010762) #24	RALGDS (ENSMMSG00000010851) #25	GBGT1 (ENSMMSG00000010991) #26	ENSMMSG00000011070 #27	ENSMMSG00000011095 ##27	ENSMMSG00000011134 ##27	GLT6D1 (ENSMMSG00000011226) ##26	ENSMMSG00000011276 ##27	KCNT1 (ENSMMSG00000011544)	CAMSAP1 (ENSMMSG00000017438)	UBAC1 (ENSMMSG00000017512)	NACC2 (ENSMMSG00000017566)	LHX3 (ENSMMSG00000017607)	QSOX2 (ENSMMSG00000017697)
Yarkand deer	MODERN SPECIES	2	PRRC2B (ENSCHYG00000022095)	POMT1 (ENSCHYG00000022562)	ENSCHYG00000022691	RAPGEF1 (ENSCHYG00000022836)	MED27 (ENSCHYG00000023708)	NTNG2 (ENSCHYG00000023956)	SETX (ENSCHYG00000024123)	TTF1 (ENSCHYG00000024227)	CFAP77 (ENSCHYG00000024295)	BARHL1 (ENSCHYG00000024337)	DDX31 (ENSCHYG00000024361)	GTF3C4 (ENSCHYG00000024487)	AK8 (ENSCHYG00000024548)	SPACA9 (ENSCHYG00000024687) #20	TSC1 (ENSCHYG00000024737) #21	GFI1B (ENSCHYG00000024813) #22	GTF3C5 (ENSCHYG00000024889) #23	CEL (ENSCHYG00000025109) #24	RALGDS (ENSCHYG00000025294) #25	GBGT1 (ENSCHYG00000025531) #26	ENSCHYG00000025629	ENSCHYG00000025640 #27	ENSCHYG00000025684 ##27	ENSCHYG00000025740 ##27	GLT6D1 (ENSCHYG00000025780) ##26	ENSCHYG00000025799 ##27	SOHLH1 (ENSCHYG00000025814)	KCNT1 (ENSCHYG00000025895)	CAMSAP1 (ENSCHYG00000026516)	UBAC1 (ENSCHYG00000026555)	NACC2 (ENSCHYG00000026588)
Camelidae	ANCESTRAL SPECIES	5	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26
Arabian camel	MODERN SPECIES	30	POMT1 (ENSCDRG00005006084)	UCK1 (ENSCDRG00005006047)	RAPGEF1 (ENSCDRG00005004831)	MED27 (ENSCDRG00005004656)	NTNG2 (ENSCDRG00005004638)	SETX (ENSCDRG00005004571)	TTF1 (ENSCDRG00005004487)	ENSCDRG00005004468	CFAP77 (ENSCDRG00005004446)	BARHL1 (ENSCDRG00005004416)	DDX31 (ENSCDRG00005004319)	GTF3C4 (ENSCDRG00005004253)	AK8 (ENSCDRG00005004189)	SPACA9 (ENSCDRG00005004128) #20	TSC1 (ENSCDRG00005003981) #21	GFI1B (ENSCDRG00005003865) #22	GTF3C5 (ENSCDRG00005003789) #23	CEL (ENSCDRG00005003564) #24	RALGDS (ENSCDRG00005003140) #25	GBGT1 (ENSCDRG00005003053) #26	ENSCDRG00005003034	LCN9 (ENSCDRG00005003024) ##27	ENSCDRG00005003014 ##27	ENSCDRG00005002998	KCNT1 (ENSCDRG00005002073)	CAMSAP1 (ENSCDRG00005001959)	UBAC1 (ENSCDRG00005001921)	NACC2 (ENSCDRG00005001900)	TMEM250 (ENSCDRG00005001892)	LHX3 (ENSCDRG00005001876)	QSOX2 (ENSCDRG00005001830)
Alpaca	MODERN SPECIES	1653																ENSVPAG00000007557 #22
Atlantogenata	ANCESTRAL SPECIES	47	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23
Elephant	MODERN SPECIES	472	POMT1 (ENSLAFG00000021539)	UCK1 (ENSLAFG00000021633)	ENSLAFG00000027336	RAPGEF1 (ENSLAFG00000003693)	MED27 (ENSLAFG00000011556)	NTNG2 (ENSLAFG00000032466)	ENSLAFG00000017327	TTF1 (ENSLAFG00000001119)	CFAP77 (ENSLAFG00000015373)	BARHL1 (ENSLAFG00000015377)	DDX31 (ENSLAFG00000015379)	GTF3C4 (ENSLAFG00000015395)	AK8 (ENSLAFG00000015400)	SPACA9 (ENSLAFG00000015404) #20	TSC1 (ENSLAFG00000008433) #21	GFI1B (ENSLAFG00000022367) #22	GTF3C5 (ENSLAFG00000003053) #23	ENSLAFG00000004056	GBGT1 (ENSLAFG00000005668) #26	FXN (ENSLAFG00000009606)	CEL (ENSLAFG00000003263) #24	ENSLAFG00000009356	ENTREP1 (ENSLAFG00000001072)	APBA1 (ENSLAFG00000004384)	PTAR1 (ENSLAFG00000001293)	MAMDC2 (ENSLAFG00000005018)	ENSLAFG00000005022	ENSLAFG00000021378	KLF9 (ENSLAFG00000027506)	TRPM3 (ENSLAFG00000006930)	CEMIP2 (ENSLAFG00000015624)
Hyrax	MODERN SPECIES	10780																GFI1B (ENSPCAG00000012329) #22
Tenrec	MODERN SPECIES	16610																GFI1B (ENSETEG00000010167) #22
Xenarthra	ANCESTRAL SPECIES	279								ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b
Armadillo	MODERN SPECIES	3478								TTF1 (ENSDNOG00000014161)	CFAP77 (ENSDNOG00000046193)	BARHL1 (ENSDNOG00000005808)	DDX31 (ENSDNOG00000009865)	GTF3C4 (ENSDNOG00000040012)	AK8 (ENSDNOG00000017112)	SPACA9 (ENSDNOG00000014209) #20	TSC1 (ENSDNOG00000014217) #21	GFI1B (ENSDNOG00000036528) #22	GTF3C5 (ENSDNOG00000015105) #23	CEL (ENSDNOG00000015119) #24	RALGDS (ENSDNOG00000042514) #25	GBGT1 (ENSDNOG00000034893) #26	CCDC180 (ENSDNOG00000001092)	ENSDNOG00000048975
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.l	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.l	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.l	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.l	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
koala	MODERN SPECIES	11																ENSPCIG00000019724 #22	GTF3C5 (ENSPCIG00000019723) #23	CEL (ENSPCIG00000019261) #24	RALGDS (ENSPCIG00000019258) #25	GBGT1 (ENSPCIG00000019257) #26	ENSPCIG00000017355	ABO (ENSPCIG00000037174) #29	ENSPCIG00000017357	SURF6 (ENSPCIG00000017358)	MED22 (ENSPCIG00000017359)	ENSPCIG00000017361	SURF1 (ENSPCIG00000017368)	SURF2 (ENSPCIG00000017370)	SURF4 (ENSPCIG00000034579)	ENSPCIG00000017378	REXO4 (ENSPCIG00000017379)
Common wonbat	MODERN SPECIES	1030	POMT1 (ENSVURG00010012559)	UCK1 (ENSVURG00010012538)	ENSVURG00010012532	RAPGEF1 (ENSVURG00010012445)	MED27 (ENSVURG00010012431)	NTNG2 (ENSVURG00010012426)	SETX (ENSVURG00010012398)	ENSVURG00010012387	CFAP77 (ENSVURG00010012382)	BARHL1 (ENSVURG00010012374)	DDX31 (ENSVURG00010012363)	GTF3C4 (ENSVURG00010012352)	AK8 (ENSVURG00010012340)	SPACA9 (ENSVURG00010012327) #20	TSC1 (ENSVURG00010012309) #21	ENSVURG00010012303 #22	GTF3C5 (ENSVURG00010012277) #23	RALGDS (ENSVURG00010012218) #25	GBGT1 (ENSVURG00010012204) #26	ABO (ENSVURG00010012185) #29	SURF6 (ENSVURG00010012180)	MED22 (ENSVURG00010012177)	ENSVURG00010012159	ENSVURG00010012150	SURF2 (ENSVURG00010012144)	SURF4 (ENSVURG00010012136)	REXO4 (ENSVURG00010012130)	ADAMTS13 (ENSVURG00010012105)	CACFD1 (ENSVURG00010012091)	SLC2A6 (ENSVURG00010012076)	MYMK (ENSVURG00010012068)
Tasmanian devil	MODERN SPECIES	1	PRRC2B (ENSSHAG00000017574)	UCK1 (ENSSHAG00000026604)	ENSSHAG00000027332	RAPGEF1 (ENSSHAG00000017744)	MED27 (ENSSHAG00000021149)	NTNG2 (ENSSHAG00000018529)	SETX (ENSSHAG00000018610)	ENSSHAG00000023663	CFAP77 (ENSSHAG00000018717)	BARHL1 (ENSSHAG00000025768)	DDX31 (ENSSHAG00000018804)	GTF3C4 (ENSSHAG00000018827)	AK8 (ENSSHAG00000025576)	SPACA9 (ENSSHAG00000004975) #20	TSC1 (ENSSHAG00000005234) #21	GFI1B (ENSSHAG00000006462) #22	GTF3C5 (ENSSHAG00000007100) #23	CEL (ENSSHAG00000007405) #24	RALGDS (ENSSHAG00000007565) #25	GBGT1 (ENSSHAG00000008459) #26	ENSSHAG00000030785	SURF6 (ENSSHAG00000030011)	ENSSHAG00000023202	RPL7A (ENSSHAG00000004337)	SURF1 (ENSSHAG00000004408)	SURF2 (ENSSHAG00000004511)	SURF4 (ENSSHAG00000029692)	ENSSHAG00000005002	REXO4 (ENSSHAG00000005827)	ENSSHAG00000027814	ENSSHAG00000006104
Opossum	MODERN SPECIES		POMT1 (ENSMODG00000012449)	UCK1 (ENSMODG00000012460)	ENSMODG00000049539	RAPGEF1 (ENSMODG00000012492)	MED27 (ENSMODG00000012499)	NTNG2 (ENSMODG00000012511)	SETX (ENSMODG00000012535)	ENSMODG00000012538	CFAP77 (ENSMODG00000028455)	BARHL1 (ENSMODG00000012544)	DDX31 (ENSMODG00000012555)	GTF3C4 (ENSMODG00000012559)	AK8 (ENSMODG00000012561)	SPACA9 (ENSMODG00000012565) #20	TSC1 (ENSMODG00000012592) #21	GFI1B (ENSMODG00000012600) #22	GTF3C5 (ENSMODG00000012620) #23	CEL (ENSMODG00000012628) #24	RALGDS (ENSMODG00000012656) #25	GBGT1 (ENSMODG00000012666) #26	ENSMODG00000012689	ENSMODG00000012702 #29	ENSMODG00000029365	SURF6 (ENSMODG00000012744)	MED22 (ENSMODG00000012748)	ENSMODG00000012754	SURF1 (ENSMODG00000012759)	SURF2 (ENSMODG00000012766)	ENSMODG00000012773	ENSMODG00000012800	REXO4 (ENSMODG00000012817)
Platypus	MODERN SPECIES	15	PRRC2B (ENSOANG00000014780)	POMT1 (ENSOANG00000014781)	UCK1 (ENSOANG00000014782)	ENSOANG00000031008	RAPGEF1 (ENSOANG00000014783)	MED27 (ENSOANG00000014784)	NTNG2 (ENSOANG00000049690)	SETX (ENSOANG00000050914)	ENSOANG00000003116	BARHL1 (ENSOANG00000050331)	DDX31 (ENSOANG00000005047)	GTF3C4 (ENSOANG00000005050)	AK8 (ENSOANG00000005052)	SPACA9 (ENSOANG00000005054) #20	TSC1 (ENSOANG00000005055) #21	ENSOANG00000022289 #22	GTF3C5 (ENSOANG00000014724) #23	CEL (ENSOANG00000014725) #24	RALGDS (ENSOANG00000014726) #25	GBGT1 (ENSOANG00000042550) #26	ENSOANG00000012224	ENSOANG00000015238 #29	SURF6 (ENSOANG00000039386)	ENSOANG00000038229 #29	ENSOANG00000045924 #29	MED22 (ENSOANG00000007059)	ENSOANG00000007060	SURF1 (ENSOANG00000050637)	SURF2 (ENSOANG00000039568)	SURF4 (ENSOANG00000050279)	ENSOANG00000002452
Sauria	ANCESTRAL SPECIES	33	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Episquamata	ANCESTRAL SPECIES	15	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Toxicofera	ANCESTRAL SPECIES	26	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Elapidae	ANCESTRAL SPECIES	18	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729.c	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Elapidae_a	ANCESTRAL SPECIES	26	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235.b	ENSGT00940000156235.a	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729.c	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529	ENSGT00940000159976
Acanthophiinae	ANCESTRAL SPECIES	27	ENSGT00530000064359.b.a	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235.a	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729.c	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800.c	ENSGT00530000064123	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529	ENSGT00940000159976
Mainland tiger snake	MODERN SPECIES	338					MED27 (ENSNSUG00000019942)	NTNG2 (ENSNSUG00000019943)	SETX (ENSNSUG00000019945)	ENSNSUG00000019949	ENSNSUG00000019950	BARHL1 (ENSNSUG00000019951)	DDX31 (ENSNSUG00000019952)	GTF3C4 (ENSNSUG00000019953)	ENSNSUG00000019954	SPACA9 (ENSNSUG00000019955) #20	TSC1 (ENSNSUG00000019956) #21	GFI1B (ENSNSUG00000020013) #22	GTF3C5 (ENSNSUG00000020014) #23	CEL (ENSNSUG00000020017) #24
Eastern brown snake	MODERN SPECIES	54	SLC2A8 (ENSPTXG00000006491)	FBXW2 (ENSPTXG00000006488)	ENSPTXG00000006486	ENSPTXG00000006484	UCK1 (ENSPTXG00000006482)	RAPGEF1 (ENSPTXG00000006454)	MED27 (ENSPTXG00000006450)	NTNG2 (ENSPTXG00000006443)	SETX (ENSPTXG00000006442)	ENSPTXG00000006441	ENSPTXG00000006437	BARHL1 (ENSPTXG00000006435)	ENSPTXG00000006434	GTF3C4 (ENSPTXG00000006433)	TSC1 (ENSPTXG00000006432) #21	GFI1B (ENSPTXG00000006431) #22	GTF3C5 (ENSPTXG00000006429) #23	CEL (ENSPTXG00000006097) #24	RALGDS (ENSPTXG00000006071) #25	ENSPTXG00000006070	SURF6 (ENSPTXG00000006069)	MED22 (ENSPTXG00000006068)	ENSPTXG00000006064	RPL7A (ENSPTXG00000006063)	SURF1 (ENSPTXG00000006062)	ENSPTXG00000006061	SURF4 (ENSPTXG00000006060)	REXO4 (ENSPTXG00000006059)	ENSPTXG00000006058	ENSPTXG00000006057	CACFD1 (ENSPTXG00000006055)
Indian cobra	MODERN SPECIES	8	FIBCD1 (ENSNNAG00000017765)	LAMC3 (ENSNNAG00000017777)	AIF1L (ENSNNAG00000017808)	ENSNNAG00000017814	POMT1 (ENSNNAG00000017820)	UCK1 (ENSNNAG00000017826)	PRRT1B (ENSNNAG00000017829)	ENSNNAG00000017831	NTNG2 (ENSNNAG00000017832)	SETX (ENSNNAG00000017835)	ENSNNAG00000017840	ENSNNAG00000017847	ENSNNAG00000017849	TSC1 (ENSNNAG00000003400) #21	SPACA9 (ENSNNAG00000003551) #20	GFI1B (ENSNNAG00000003570) #22	GTF3C5 (ENSNNAG00000003589) #23	ENSNNAG00000003615 #25	ENSNNAG00000003659	SURF6 (ENSNNAG00000003691)	MED22 (ENSNNAG00000003707)	RPL7A (ENSNNAG00000003733)	SURF1 (ENSNNAG00000003784)	SURF2 (ENSNNAG00000003801)	SURF4 (ENSNNAG00000003827)	STKLD1 (ENSNNAG00000003875)	REXO4 (ENSNNAG00000004002)	ADAMTS13 (ENSNNAG00000004087)	CACFD1 (ENSNNAG00000004619)	SLC2A6 (ENSNNAG00000004629)	RNF183 (ENSNNAG00000004642)
Laterata	ANCESTRAL SPECIES	20	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784.e	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Argentine black and white tegu	MODERN SPECIES	52	POMT1 (ENSSMRG00000007566)	UCK1 (ENSSMRG00000007569)	PRRT1B (ENSSMRG00000007570)	RAPGEF1 (ENSSMRG00000007571)	MED27 (ENSSMRG00000007604)	NTNG2 (ENSSMRG00000007605)	SETX (ENSSMRG00000007608)	ENSSMRG00000007632	ENSSMRG00000007640	BARHL1 (ENSSMRG00000007641)	DDX31 (ENSSMRG00000007644)	GTF3C4 (ENSSMRG00000007647)	ENSSMRG00000007648	SPACA9 (ENSSMRG00000007649) #20	TSC1 (ENSSMRG00000007650) #21	GFI1B (ENSSMRG00000007655) #22	GTF3C5 (ENSSMRG00000007664) #23	CEL (ENSSMRG00000007678) #24	PIERCE1 (ENSSMRG00000007760)	RALGDS (ENSSMRG00000007784) #25	GBGT1 (ENSSMRG00000007794) #26	SURF6 (ENSSMRG00000007795)	MED22 (ENSSMRG00000007797)	RPL7A (ENSSMRG00000007800)	SURF1 (ENSSMRG00000007809)	SURF2 (ENSSMRG00000007810)	SURF4 (ENSSMRG00000007813)	REXO4 (ENSSMRG00000007816)	ENSSMRG00000007820	ENSSMRG00000007824	CACFD1 (ENSSMRG00000007825)
tuatara	MODERN SPECIES	585	ENSSPUG00000017223	ENSSPUG00000017193	POMT1 (ENSSPUG00000017171)	UCK1 (ENSSPUG00000017157)	PRRT1B (ENSSPUG00000017149)	RAPGEF1 (ENSSPUG00000016839)	MED27 (ENSSPUG00000016739)	NTNG2 (ENSSPUG00000016729)	SETX (ENSSPUG00000016332)	TTF1 (ENSSPUG00000016225)	CFAP77 (ENSSPUG00000016191)	DDX31 (ENSSPUG00000016144)	AK8 (ENSSPUG00000016094)	SPACA9 (ENSSPUG00000016070) #20	TSC1 (ENSSPUG00000016052) #21	GFI1B (ENSSPUG00000016039) #22	GTF3C5 (ENSSPUG00000016018) #23	CEL (ENSSPUG00000016006) #24	RALGDS (ENSSPUG00000015985) #25	GBGT1 (ENSSPUG00000015979) #26	ABO (ENSSPUG00000015966) #29	SURF6 (ENSSPUG00000015954)	MED22 (ENSSPUG00000015941)	RPL7A (ENSSPUG00000015903)	SURF1 (ENSSPUG00000015894)	SURF2 (ENSSPUG00000015887)	SURF4 (ENSSPUG00000015878)	REXO4 (ENSSPUG00000015868)
Archelosauria	ANCESTRAL SPECIES	32	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Archosauria	ANCESTRAL SPECIES	25	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Aves	ANCESTRAL SPECIES	21	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229
Neognathae	ANCESTRAL SPECIES	20	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00960000189395	ENSGT00940000155193.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00960000189395	ENSGT00940000155193.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000178229
Golden eagle	MODERN SPECIES	16	POMT1 (ENSACCG00020013833)	UCK1 (ENSACCG00020013870)	PRRT1B (ENSACCG00020013892)	RAPGEF1 (ENSACCG00020013990)	MED27 (ENSACCG00020014108)	NTNG2 (ENSACCG00020014123)	SETX (ENSACCG00020014176)	TTF1 (ENSACCG00020014241)	CFAP77 (ENSACCG00020014262)	BARHL1 (ENSACCG00020014275)	DDX31 (ENSACCG00020014292)	GTF3C4 (ENSACCG00020014316)	ENSACCG00020014358	SPACA9 (ENSACCG00020014400) #20	TSC1 (ENSACCG00020014425) #21	GFI1B (ENSACCG00020014453) #22	CEL (ENSACCG00020014463) #24	GTF3C5 (ENSACCG00020014480) #23	RALGDS (ENSACCG00020014509) #25	GBGT1 (ENSACCG00020014545) #26	ENSACCG00020014574	SURF6 (ENSACCG00020014640)	MED22 (ENSACCG00020014651)	RPL7A (ENSACCG00020014662)	SURF1 (ENSACCG00020014703)	SURF2 (ENSACCG00020014719)	SURF4 (ENSACCG00020014728)	ENSACCG00020014739	REXO4 (ENSACCG00020014754)	ADAMTS13 (ENSACCG00020014817)	ENSACCG00020014783
Kakapo	MODERN SPECIES	9	POMT1 (ENSSHBG00005017043)	UCK1 (ENSSHBG00005017024)	PRRT1B (ENSSHBG00005017020)	RAPGEF1 (ENSSHBG00005014669)	MED27 (ENSSHBG00005014439)	NTNG2 (ENSSHBG00005014433)	SETX (ENSSHBG00005014399)	TTF1 (ENSSHBG00005014371)	CFAP77 (ENSSHBG00005014350)	BARHL1 (ENSSHBG00005014333)	DDX31 (ENSSHBG00005014274)	GTF3C4 (ENSSHBG00005014255)	ENSSHBG00005014233	SPACA9 (ENSSHBG00005014220) #20	TSC1 (ENSSHBG00005014209) #21	GFI1B (ENSSHBG00005014198) #22	GARNL3 (ENSSHBG00005014166)	SLC2A8 (ENSSHBG00005014129)	FBXW2 (ENSSHBG00005014071)	ENSSHBG00005014060	ENSSHBG00005014052	ANGPTL2 (ENSSHBG00005014043)	RALGPS1 (ENSSHBG00005014025)	ZBTB34 (ENSSHBG00005013999)	ZBTB43 (ENSSHBG00005013981)	LMX1B (ENSSHBG00005013967)	MVB12B (ENSSHBG00005013946)	ENSSHBG00005013923	MAPKAP1 (ENSSHBG00005013878)	GAPVD1 (ENSSHBG00005013815)	HSPA5 (ENSSHBG00005013782)
Passeriformes	ANCESTRAL SPECIES	20	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000178229	ENSGT00940000158379	ENSGT00390000000529
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000155193.b	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000178229	ENSGT00940000158379
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746.c #20	ENSGT00390000007746.d #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000155193.b	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00390000000529.a
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746.c #20	ENSGT00390000007746.d #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000155193.b	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00390000000529.a
Common canary	MODERN SPECIES	22	ENSSCAG00000004075	RAPGEF1 (ENSSCAG00000004064)	MED27 (ENSSCAG00000004058)	NTNG2 (ENSSCAG00000004051)	SETX (ENSSCAG00000004025)	TTF1 (ENSSCAG00000004015)	CFAP77 (ENSSCAG00000004005)	BARHL1 (ENSSCAG00000003997)	ENSSCAG00000003986	DDX31 (ENSSCAG00000003958)	GTF3C4 (ENSSCAG00000003948)	ENSSCAG00000003930	ENSSCAG00000003917 #20	ENSSCAG00000003912 #20	TSC1 (ENSSCAG00000003900) #21	GFI1B (ENSSCAG00000003887) #22	CEL (ENSSCAG00000003877) #24	GTF3C5 (ENSSCAG00000003831) #23	RALGDS (ENSSCAG00000003810) #25	GBGT1 (ENSSCAG00000003805) #26	SURF6 (ENSSCAG00000003799)	MED22 (ENSSCAG00000003785)	ENSSCAG00000003767	ENSSCAG00000003765	SURF1 (ENSSCAG00000003763)	SURF2 (ENSSCAG00000003761)	SURF4 (ENSSCAG00000003758)	REXO4 (ENSSCAG00000003750)	ADAMTS13 (ENSSCAG00000003641)	CACFD1 (ENSSCAG00000003605)	SLC2A6 (ENSSCAG00000003602)
Zebra finch	MODERN SPECIES	8	PRRC2B (ENSTGUG00000004903)	POMT1 (ENSTGUG00000004939)	UCK1 (ENSTGUG00000022263)	RAPGEF1 (ENSTGUG00000005007)	MED27 (ENSTGUG00000005076)	NTNG2 (ENSTGUG00000005108)	SETX (ENSTGUG00000005117)	TTF1 (ENSTGUG00000005125)	ENSTGUG00000005102	BARHL1 (ENSTGUG00000005134)	DDX31 (ENSTGUG00000005142)	GTF3C4 (ENSTGUG00000005175)	ENSTGUG00000025695	TSC1 (ENSTGUG00000005221) #21	SPACA9 (ENSTGUG00000005213) #20	GFI1B (ENSTGUG00000028979) #22	CEL (ENSTGUG00000005306) #24	GTF3C5 (ENSTGUG00000005329) #23	RALGDS (ENSTGUG00000005351) #25	GBGT1 (ENSTGUG00000005430) #26	SURF6 (ENSTGUG00000005438)	RPL7A (ENSTGUG00000018936)	ENSTGUG00000023360	SURF1 (ENSTGUG00000005485)	SURF2 (ENSTGUG00000005497)	SURF4 (ENSTGUG00000005505)	STKLD1 (ENSTGUG00000005535)	REXO4 (ENSTGUG00000005537)	ADAMTS13 (ENSTGUG00000005547)	CACFD1 (ENSTGUG00000020148)	SLC2A6 (ENSTGUG00000005568)
Medium ground finch	MODERN SPECIES	32	PLPP7 (ENSGFOG00000010507)	PRRC2B (ENSGFOG00000010475)	POMT1 (ENSGFOG00000010438)	UCK1 (ENSGFOG00000010426)	RAPGEF1 (ENSGFOG00000010329)	MED27 (ENSGFOG00000010306)	NTNG2 (ENSGFOG00000010295)	SETX (ENSGFOG00000010285)	TTF1 (ENSGFOG00000010270)	CFAP77 (ENSGFOG00000010260)	DDX31 (ENSGFOG00000010248)	GTF3C4 (ENSGFOG00000010238)	ENSGFOG00000010223	SPACA9 (ENSGFOG00000010216) #20	TSC1 (ENSGFOG00000010188) #21	GFI1B (ENSGFOG00000010176) #22	CEL (ENSGFOG00000010160) #24	GTF3C5 (ENSGFOG00000010072) #23	RALGDS (ENSGFOG00000010040) #25	GBGT1 (ENSGFOG00000010032) #26	SURF6 (ENSGFOG00000010029)	MED22 (ENSGFOG00000010019)	ENSGFOG00000009998	SURF1 (ENSGFOG00000009990)	SURF2 (ENSGFOG00000009981)	SURF4 (ENSGFOG00000009969)	REXO4 (ENSGFOG00000009958)	ADAMTS13 (ENSGFOG00000009940)	CACFD1 (ENSGFOG00000009924)	SLC2A6 (ENSGFOG00000009900)	MYMK (ENSGFOG00000009881)
Flycatcher	MODERN SPECIES	7	ENSFALG00000029093	PRRT1B (ENSFALG00000027167)	RAPGEF1 (ENSFALG00000001461)	MED27 (ENSFALG00000001462)	NTNG2 (ENSFALG00000001463)	SETX (ENSFALG00000001464)	TTF1 (ENSFALG00000001465)	ENSFALG00000001466	BARHL1 (ENSFALG00000001467)	DDX31 (ENSFALG00000001468)	GTF3C4 (ENSFALG00000001474)	ENSFALG00000001475	ENSFALG00000001476 #20	ENSFALG00000001477 #20	TSC1 (ENSFALG00000001478) #21	GFI1B (ENSFALG00000001479) #22	ENSFALG00000001483 #24	ENSFALG00000026142 #24	GTF3C5 (ENSFALG00000026322) #23	RALGDS (ENSFALG00000001491) #25	GBGT1 (ENSFALG00000001494) #26	SURF6 (ENSFALG00000001495)	MED22 (ENSFALG00000022909)	ENSFALG00000023190	ENSFALG00000028824	SURF1 (ENSFALG00000023827)	SURF2 (ENSFALG00000001509)	SURF4 (ENSFALG00000027118)	REXO4 (ENSFALG00000001520)	ADAMTS13 (ENSFALG00000024186)	ENSFALG00000001527
Great tit	MODERN SPECIES	7	UCK1 (ENSPMJG00000006806)	PRRT1B (ENSPMJG00000006804)	RAPGEF1 (ENSPMJG00000006780)	ENSPMJG00000006751	MED27 (ENSPMJG00000006745)	NTNG2 (ENSPMJG00000006737)	SETX (ENSPMJG00000006725)	TTF1 (ENSPMJG00000006722)	CFAP77 (ENSPMJG00000006721)	BARHL1 (ENSPMJG00000006706)	DDX31 (ENSPMJG00000006705)	ENSPMJG00000006704	GTF3C4 (ENSPMJG00000006703)	ENSPMJG00000006702	TSC1 (ENSPMJG00000006701) #21	GFI1B (ENSPMJG00000006697) #22	GTF3C5 (ENSPMJG00000006692) #23	RALGDS (ENSPMJG00000006684) #25	GBGT1 (ENSPMJG00000006674) #26	SURF6 (ENSPMJG00000006670)	MED22 (ENSPMJG00000006667)	RPL7A (ENSPMJG00000006519)	SURF1 (ENSPMJG00000006517)	SURF2 (ENSPMJG00000006516)	SURF4 (ENSPMJG00000006513)	STKLD1 (ENSPMJG00000006510)	REXO4 (ENSPMJG00000006509)	ADAMTS13 (ENSPMJG00000006470)	CACFD1 (ENSPMJG00000006469)	SLC2A6 (ENSPMJG00000006468)	MYMK (ENSPMJG00000006466)
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379	ENSGT00940000178229	ENSGT00390000000529
Anatidae	ANCESTRAL SPECIES	13	ENSGT01070000256962	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00940000155193.a.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379.a	ENSGT00390000000529	ENSGT00940000159976
Duck	MODERN SPECIES	8	POMT1 (ENSAPLG00000014827)	UCK1 (ENSAPLG00000027008)	PRRT1B (ENSAPLG00000029937)	RAPGEF1 (ENSAPLG00000015465)	MED27 (ENSAPLG00000016059)	NTNG2 (ENSAPLG00000016131)	ENSAPLG00000017432	SETX (ENSAPLG00000016276)	TTF1 (ENSAPLG00000016383)	CFAP77 (ENSAPLG00000016385)	DDX31 (ENSAPLG00000016396)	GTF3C4 (ENSAPLG00000000962)	ENSAPLG00000002249	SPACA9 (ENSAPLG00000002446) #20	TSC1 (ENSAPLG00000002487) #21	GFI1B (ENSAPLG00000003373) #22	GTF3C5 (ENSAPLG00000003782) #23	ENSAPLG00000019453	GBGT1 (ENSAPLG00000004843) #26	ENSAPLG00000004861	SURF6 (ENSAPLG00000005069)	ENSAPLG00000005247	SURF1 (ENSAPLG00000005581)	SURF2 (ENSAPLG00000005587)	SURF4 (ENSAPLG00000005704)	STKLD1 (ENSAPLG00000005819)	REXO4 (ENSAPLG00000005865)	ENSAPLG00000019736	ENSAPLG00000017995	ENSAPLG00000006553	CACFD1 (ENSAPLG00000006756)
Pink-footed goose	MODERN SPECIES	8	ENSABRG00000021060	POMT1 (ENSABRG00000021073)	UCK1 (ENSABRG00000021134)	RAPGEF1 (ENSABRG00000021162)	MED27 (ENSABRG00000021196)	NTNG2 (ENSABRG00000021198)	ENSABRG00000021202	SETX (ENSABRG00000021209)	ENSABRG00000021218	CFAP77 (ENSABRG00000021236)	DDX31 (ENSABRG00000021246)	GTF3C4 (ENSABRG00000021253)	ENSABRG00000021258	SPACA9 (ENSABRG00000021271) #20	TSC1 (ENSABRG00000021321) #21	GFI1B (ENSABRG00000021434) #22	CEL (ENSABRG00000021442) #24	GTF3C5 (ENSABRG00000021454) #23	RALGDS (ENSABRG00000021498) #25	GBGT1 (ENSABRG00000021532) #26	ENSABRG00000021548	SURF6 (ENSABRG00000021551)	MED22 (ENSABRG00000021552)	RPL7A (ENSABRG00000021556)	SURF1 (ENSABRG00000021570)	SURF2 (ENSABRG00000021576)	SURF4 (ENSABRG00000021580)	ENSABRG00000021582	ADAMTS13 (ENSABRG00000021585)	CACFD1 (ENSABRG00000021596)	SLC2A6 (ENSABRG00000021613)
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Japanese quail	MODERN SPECIES	8	PRRC2B (ENSCJPG00005003775)	POMT1 (ENSCJPG00005005203)	UCK1 (ENSCJPG00005005442)	RAPGEF1 (ENSCJPG00005005477)	MED27 (ENSCJPG00005006101)	NTNG2 (ENSCJPG00005006108)	SETX (ENSCJPG00005006122)	ENSCJPG00005006396	CFAP77 (ENSCJPG00005006401)	BARHL1 (ENSCJPG00005006405)	ENSCJPG00005006408	GTF3C4 (ENSCJPG00005006410)	ENSCJPG00005006421	SPACA9 (ENSCJPG00005006432) #20	TSC1 (ENSCJPG00005006437) #21	GFI1B (ENSCJPG00005006841) #22	CEL (ENSCJPG00005006842) #24	GTF3C5 (ENSCJPG00005006845) #23	RALGDS (ENSCJPG00005006859) #25	GBGT1 (ENSCJPG00005006862) #26	SURF6 (ENSCJPG00005006864)	MED22 (ENSCJPG00005006870)	RPL7A (ENSCJPG00005006873)	SURF1 (ENSCJPG00005006886)	SURF2 (ENSCJPG00005006936)	SURF4 (ENSCJPG00005006937)	REXO4 (ENSCJPG00005006938)	ADAMTS13 (ENSCJPG00005006939)	CACFD1 (ENSCJPG00005006982)	SLC2A6 (ENSCJPG00005006987)	MYMK (ENSCJPG00005007014)
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00940000156231 #24	ENSGT00390000004458 #23	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00960000189395	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Turkey	MODERN SPECIES	10	PRRC2B (ENSMGAG00000005688)	POMT1 (ENSMGAG00000005747)	UCK1 (ENSMGAG00000005829)	RAPGEF1 (ENSMGAG00000005844)	MED27 (ENSMGAG00000005905)	NTNG2 (ENSMGAG00000005914)	SETX (ENSMGAG00000005934)	ENSMGAG00000005982	CFAP77 (ENSMGAG00000005994)	BARHL1 (ENSMGAG00000019353)	DDX31 (ENSMGAG00000006002)	GTF3C4 (ENSMGAG00000006042)	ENSMGAG00000006059	SPACA9 (ENSMGAG00000006076) #20	TSC1 (ENSMGAG00000006080) #21	GFI1B (ENSMGAG00000006129) #22	CEL (ENSMGAG00000006148) #24	GTF3C5 (ENSMGAG00000006216) #23	RALGDS (ENSMGAG00000006234) #25	GBGT1 (ENSMGAG00000019070) #26	ENSMGAG00000006338	SURF6 (ENSMGAG00000017822)	MED22 (ENSMGAG00000006384)	RPL7A (ENSMGAG00000006406)	ENSMGAG00000020582	SURF1 (ENSMGAG00000006465)	SURF2 (ENSMGAG00000006391)	SURF4 (ENSMGAG00000022913)	STKLD1 (ENSMGAG00000006514)	REXO4 (ENSMGAG00000006521)	ADAMTS13 (ENSMGAG00000006545)
Chicken	MODERN SPECIES	8	POMT1 (ENSGALG00010028175)	UCK1 (ENSGALG00010028198)	PRRT1B (ENSGALG00010028205)	RAPGEF1 (ENSGALG00010028270)	MED27 (ENSGALG00010028438)	NTNG2 (ENSGALG00010028768)	SETX (ENSGALG00010028771)	TTF1 (ENSGALG00010028772)	CFAP77 (ENSGALG00010028777)	BARHL1 (ENSGALG00010028780)	DDX31 (ENSGALG00010028783)	GTF3C4 (ENSGALG00010028786)	ENSGALG00010028800	SPACA9 (ENSGALG00010028806) #20	TSC1 (ENSGALG00010028818) #21	GFI1B (ENSGALG00010028823) #22	CEL (ENSGALG00010028826) #24	GTF3C5 (ENSGALG00010028829) #23	RALGDS (ENSGALG00010029148) #25	GBGT1 (ENSGALG00010028833) #26	ENSGALG00010028849	SURF6 (ENSGALG00010028855)	MED22 (ENSGALG00010028857)	RPL7A (ENSGALG00010028854)	SURF1 (ENSGALG00010028859)	SURF2 (ENSGALG00010028860)	SURF4 (ENSGALG00010028861)	STKLD1 (ENSGALG00010028865)	REXO4 (ENSGALG00010028867)	ADAMTS13 (ENSGALG00010028869)	CACFD1 (ENSGALG00010028870)
African ostrich	MODERN SPECIES	293	PLPP7 (ENSSCUG00000002660)	PRRC2B (ENSSCUG00000002639)	POMT1 (ENSSCUG00000002625)	UCK1 (ENSSCUG00000002622)	RAPGEF1 (ENSSCUG00000002611)	MED27 (ENSSCUG00000002608)	NTNG2 (ENSSCUG00000002607)	SETX (ENSSCUG00000002596)	TTF1 (ENSSCUG00000002580)	CFAP77 (ENSSCUG00000002576)	DDX31 (ENSSCUG00000002568)	GTF3C4 (ENSSCUG00000002566)	ENSSCUG00000002564	SPACA9 (ENSSCUG00000002563) #20	TSC1 (ENSSCUG00000002558) #21	GFI1B (ENSSCUG00000002554) #22	GTF3C5 (ENSSCUG00000002549) #23	CEL (ENSSCUG00000002546) #24	RALGDS (ENSSCUG00000002541) #25	GBGT1 (ENSSCUG00000002536) #26	CCDC180 (ENSSCUG00000002532)	SURF6 (ENSSCUG00000002530)	RPL7A (ENSSCUG00000002526)	ENSSCUG00000002524	SURF2 (ENSSCUG00000002523)	SURF4 (ENSSCUG00000002521)	STKLD1 (ENSSCUG00000002519)	ENSSCUG00000002518	ADAMTS13 (ENSSCUG00000002516)	CACFD1 (ENSSCUG00000002514)	SLC2A6 (ENSSCUG00000002513)
Australian saltwater crocodile	MODERN SPECIES	44	POMT1 (ENSCPRG00005006119)	UCK1 (ENSCPRG00005006129)	RAPGEF1 (ENSCPRG00005006208)	MED27 (ENSCPRG00005006504)	NTNG2 (ENSCPRG00005006507)	SETX (ENSCPRG00005006521)	TTF1 (ENSCPRG00005006533)	ENSCPRG00005006540	ENSCPRG00005006545	BARHL1 (ENSCPRG00005006561)	DDX31 (ENSCPRG00005006568)	GTF3C4 (ENSCPRG00005006577)	ENSCPRG00005006588	SPACA9 (ENSCPRG00005006605) #20	TSC1 (ENSCPRG00005006645) #21	GFI1B (ENSCPRG00005006997) #22	GTF3C5 (ENSCPRG00005007006) #23	CEL (ENSCPRG00005007020) #24	RALGDS (ENSCPRG00005007054) #25	GBGT1 (ENSCPRG00005007166) #26	CCDC180 (ENSCPRG00005007199)	SURF6 (ENSCPRG00005007246)	MED22 (ENSCPRG00005007254)	RPL7A (ENSCPRG00005007264)	SURF1 (ENSCPRG00005007324)	SURF2 (ENSCPRG00005007341)	SURF4 (ENSCPRG00005007349)	REXO4 (ENSCPRG00005007353)	ADAMTS13 (ENSCPRG00005007373)	CACFD1 (ENSCPRG00005007483)	SLC2A6 (ENSCPRG00005007503)
Cryptodira	ANCESTRAL SPECIES	33	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e #29	ENSGT00390000004339	ENSGT00390000006980	ENSGT00940000155193.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607	ENSGT00940000158379
Emydidae	ANCESTRAL SPECIES	29	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00940000179483	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e.a #29	ENSGT00950000182858.A.a.e.b #29	ENSGT00390000004339	ENSGT00390000006980	ENSGT00940000155193.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00390000018038	ENSGT00940000159607
painted turtle	MODERN SPECIES	716	PRRC2B (ENSCPBG00000021552)	POMT1 (ENSCPBG00000021526)	UCK1 (ENSCPBG00000021525)	RAPGEF1 (ENSCPBG00000021248)	MED27 (ENSCPBG00000021233)	NTNG2 (ENSCPBG00000021231)	SETX (ENSCPBG00000021225)	TTF1 (ENSCPBG00000021220)	ENSCPBG00000021218	BARHL1 (ENSCPBG00000021217)	DDX31 (ENSCPBG00000021215)	ENSCPBG00000021213	GTF3C4 (ENSCPBG00000021211)	SPACA9 (ENSCPBG00000021206) #20	TSC1 (ENSCPBG00000021196) #21	GFI1B (ENSCPBG00000021186) #22	GTF3C5 (ENSCPBG00000021184) #23	CEL (ENSCPBG00000021181) #24	RALGDS (ENSCPBG00000021180) #25	GBGT1 (ENSCPBG00000021179) #26	CCDC180 (ENSCPBG00000021177)	ENSCPBG00000021175 #29	ENSCPBG00000021172 #29	MED22 (ENSCPBG00000021170)	SURF6 (ENSCPBG00000021169)	ENSCPBG00000021161	SURF1 (ENSCPBG00000021159)	SURF2 (ENSCPBG00000021158)	SURF4 (ENSCPBG00000021157)	STKLD1 (ENSCPBG00000021154)	REXO4 (ENSCPBG00000021152)
Three-toed box turtle	MODERN SPECIES	113	POMT1 (ENSTMTG00000019058)	UCK1 (ENSTMTG00000019090)	PRRT1B (ENSTMTG00000019104)	RAPGEF1 (ENSTMTG00000019367)	MED27 (ENSTMTG00000021208)	NTNG2 (ENSTMTG00000021214)	SETX (ENSTMTG00000021223)	TTF1 (ENSTMTG00000021249)	ENSTMTG00000021258	BARHL1 (ENSTMTG00000021267)	DDX31 (ENSTMTG00000021273)	GTF3C4 (ENSTMTG00000021279)	AK8 (ENSTMTG00000021305)	SPACA9 (ENSTMTG00000021395) #20	TSC1 (ENSTMTG00000021404) #21	GFI1B (ENSTMTG00000021424) #22	GTF3C5 (ENSTMTG00000021436) #23	CEL (ENSTMTG00000021451) #24	RALGDS (ENSTMTG00000021480) #25	GBGT1 (ENSTMTG00000021488) #26	CCDC180 (ENSTMTG00000021496)	MED22 (ENSTMTG00000021513)	ENSTMTG00000021519	SURF1 (ENSTMTG00000021531)	SURF2 (ENSTMTG00000021538)	SURF4 (ENSTMTG00000021543)	ENSTMTG00000021548	REXO4 (ENSTMTG00000021555)	ADAMTS13 (ENSTMTG00000021558)	CACFD1 (ENSTMTG00000021581)	SLC2A6 (ENSTMTG00000021587)
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00950000183161.a.b	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00390000014476.a	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000161613	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.b.b #26	ENSGT00940000153246.b	ENSGT00950000182858.A.a.e.d #29	ENSGT00950000182858.A.a.e.c #29	ENSGT00390000004339	ENSGT00390000006980	ENSGT00940000155193.b	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123	ENSGT00940000159607	ENSGT00940000158379
Goode s thornscrub tortoise	MODERN SPECIES	7	PRRC2B (ENSGEVG00005004949)	POMT1 (ENSGEVG00005005143)	UCK1 (ENSGEVG00005005247)	RAPGEF1 (ENSGEVG00005005647)	MED27 (ENSGEVG00005007043)	NTNG2 (ENSGEVG00005007066)	SETX (ENSGEVG00005007130)	TTF1 (ENSGEVG00005007201)	ENSGEVG00005007254	BARHL1 (ENSGEVG00005007326)	DDX31 (ENSGEVG00005007355)	GTF3C4 (ENSGEVG00005007435)	AK8 (ENSGEVG00005007458)	SPACA9 (ENSGEVG00005007523) #20	TSC1 (ENSGEVG00005007544) #21	GFI1B (ENSGEVG00005007574) #22	GTF3C5 (ENSGEVG00005007610) #23	CEL (ENSGEVG00005007652) #24	RALGDS (ENSGEVG00005007704) #25	GBGT1 (ENSGEVG00005007805) #26	CCDC180 (ENSGEVG00005007831)	ABO (ENSGEVG00005007894) #29	MED22 (ENSGEVG00005007943)	SURF6 (ENSGEVG00005007965)	ENSGEVG00005007982	SURF1 (ENSGEVG00005008048)	SURF2 (ENSGEVG00005008079)	SURF4 (ENSGEVG00005008104)	REXO4 (ENSGEVG00005008119)	ADAMTS13 (ENSGEVG00005008160)	CACFD1 (ENSGEVG00005008343)
Abingdon island giant tortoise	MODERN SPECIES	52					MED27 (ENSCABG00000007235)	NTNG2 (ENSCABG00000007232)	SETX (ENSCABG00000006727)	TTF1 (ENSCABG00000006710)	ENSCABG00000006707	BARHL1 (ENSCABG00000006705)	DDX31 (ENSCABG00000006699)	GTF3C4 (ENSCABG00000006697)	AK8 (ENSCABG00000006675)	SPACA9 (ENSCABG00000006673) #20	TSC1 (ENSCABG00000005822) #21	GFI1B (ENSCABG00000005803) #22	GTF3C5 (ENSCABG00000005774) #23	CEL (ENSCABG00000005765) #24	RALGDS (ENSCABG00000005229) #25	GBGT1 (ENSCABG00000005200) #26	CCDC180 (ENSCABG00000005195)	ENSCABG00000005190 #29
Chinese turtle	MODERN SPECIES	2141							NTNG2 (ENSPSIG00000014560)	TTF1 (ENSPSIG00000006033)	CFAP77 (ENSPSIG00000006088)	BARHL1 (ENSPSIG00000006613)	DDX31 (ENSPSIG00000006722)	GTF3C4 (ENSPSIG00000007625)	ENSPSIG00000007631	SPACA9 (ENSPSIG00000009991) #20	TSC1 (ENSPSIG00000010208) #21	GFI1B (ENSPSIG00000012112) #22	GTF3C5 (ENSPSIG00000012296) #23	CEL (ENSPSIG00000012415) #24	RALGDS (ENSPSIG00000013937) #25	GBGT1 (ENSPSIG00000014027) #26	CCDC180 (ENSPSIG00000014159)
Anura	ANCESTRAL SPECIES	38	ENSGT00940000158049	ENSGT01020000230412.A.c.a	ENSGT00940000163383	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000153601.a.a	ENSGT00940000160918	ENSGT00940000159729	ENSGT00940000172576	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00950000182858.A.a.g.b #29	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294	ENSGT00940000157101.d	ENSGT00530000064194	ENSGT00390000016800
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000026821	RAPGEF1 (ENSLLEG00000026921)	ENSLLEG00000028225	MED27 (ENSLLEG00000028273)	NTNG2 (ENSLLEG00000028376)	SETX (ENSLLEG00000028475)	ENSLLEG00000028595	ENSLLEG00000028788	ENSLLEG00000028891	BARHL1 (ENSLLEG00000028903)	DDX31 (ENSLLEG00000028957)	GTF3C4 (ENSLLEG00000029087)	ENSLLEG00000029120	SPACA9 (ENSLLEG00000029193) #20	TSC1 (ENSLLEG00000029219) #21	GFI1B (ENSLLEG00000029316) #22	GTF3C5 (ENSLLEG00000029343) #23	CEL (ENSLLEG00000029379) #24	ENSLLEG00000029433 #25	ENSLLEG00000029554	ENSLLEG00000029558	ENSLLEG00000029569	ENSLLEG00000029579	ENSLLEG00000029589	ENSLLEG00000029600	ENSLLEG00000029609 #29	ENSLLEG00000029736 #29	ENSLLEG00000029811 #29	ENSLLEG00000029904 #29	ENSLLEG00000029916 #29	ENSLLEG00000029931 #29
Frog	MODERN SPECIES	8	pomt1 (ENSXETG00000001481)	hsp90ab1 (ENSXETG00000001482)	prrt1b (ENSXETG00000047973)	rapgef1 (ENSXETG00000001485)	med27 (ENSXETG00000001486)	ntng2 (ENSXETG00000037767)	setx (ENSXETG00000006254)	ttf1 (ENSXETG00000040672)	cfap77 (ENSXETG00000039454)	ENSXETG00000047881	barhl1 (ENSXETG00000037549)	gtf3c4 (ENSXETG00000006259)	ddx31 (ENSXETG00000006258)	ak8 (ENSXETG00000006260)	spaca9 (ENSXETG00000006261) #20	gfi1b (ENSXETG00000006263) #22	tsc1 (ENSXETG00000006262) #21	gtf3c5 (ENSXETG00000006264) #23	cel.1 (ENSXETG00000006265) #24	ENSXETG00000045678	ralgds (ENSXETG00000006267) #25	ENSXETG00000046617	XB5722382 [provisional] (ENSXETG00000045755)	ENSXETG00000026587	ENSXETG00000043452 #29	ENSXETG00000041901 #29	ENSXETG00000042915 #29	ENSXETG00000042957 #29	ENSXETG00000035761 #29	abo.3 (ENSXETG00000037704) #29	abo.1 (ENSXETG00000005013) #29
Coelacanth	MODERN SPECIES	338								TTF1 (ENSLACG00000001851)	CFAP77 (ENSLACG00000022576)	BARHL1 (ENSLACG00000006792)	DDX31 (ENSLACG00000008136)	GTF3C4 (ENSLACG00000008776)	ENSLACG00000009081	SPACA9 (ENSLACG00000011271) #20	TSC1 (ENSLACG00000011402) #21	GFI1B (ENSLACG00000012207) #22	bbln (ENSLACG00000012936)	PTGES2 (ENSLACG00000012945)	ODF2 (ENSLACG00000013067)	GLE1 (ENSLACG00000013535)	SPTAN1 (ENSLACG00000013823)	DYNC2I2 (ENSLACG00000014551)	SET (ENSLACG00000014738)	si:ch211-51h9.7 (ENSLACG00000014842)	ENSLACG00000014875	ZDHHC12 (ENSLACG00000015022)	ENSLACG00000015090	ZER1 (ENSLACG00000015169)	TBC1D13 (ENSLACG00000015372)	ENDOG (ENSLACG00000015490)	SPOUT1 (ENSLACG00000015521)
Actinopterygii	ANCESTRAL SPECIES	99	ENSGT00940000155591	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a	ENSGT01100000263624	ENSGT00550000075041	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428.b	ENSGT00940000179483	ENSGT00390000011873.e.a	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000156902	ENSGT00940000164790	ENSGT00940000153877	ENSGT00940000158483	ENSGT00940000156662.d	ENSGT00390000012903	ENSGT00530000063497.a	ENSGT00390000000224
Reedfish	MODERN SPECIES	17	C5 (ENSECRG00000014651)	CNTRL (ENSECRG00000014864)	rab14 (ENSECRG00000015048)	gsna (ENSECRG00000015148)	stom (ENSECRG00000015211)	ENSECRG00000007903	ENSECRG00000007933	ENSECRG00000007960	cfap77 (ENSECRG00000007980)	barhl1a (ENSECRG00000007990)	DDX31 (ENSECRG00000008009)	GTF3C4 (ENSECRG00000008028)	ak8 (ENSECRG00000008061)	spaca9 (ENSECRG00000008164) #20	tsc1a (ENSECRG00000008186) #21	GFI1B (ENSECRG00000008218) #22	GTF3C5 (ENSECRG00000008234) #23	cel.1 (ENSECRG00000008266) #24	ralgds (ENSECRG00000008311) #25	ENSECRG00000008346	TBC1D13 (ENSECRG00000008362)	zer1 (ENSECRG00000008379)	ptgesl (ENSECRG00000008395)	odf2b (ENSECRG00000008409)	ENSECRG00000008436	sptan1 (ENSECRG00000008483)	dync2i2 (ENSECRG00000008558)	setb (ENSECRG00000008570)	ENSECRG00000008621	zdhhc12a (ENSECRG00000008689)	uap1l1 (ENSECRG00000008710)
Neopterygii	ANCESTRAL SPECIES	129	ENSGT00940000155178	ENSGT00940000155591	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a	ENSGT00940000159729	ENSGT00390000014476	ENSGT00940000160428.b	ENSGT00550000075041	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00940000179483	ENSGT00390000011873.e.a	ENSGT00940000164784	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181 #25	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000158483	ENSGT00940000156662.d	ENSGT00390000012903	ENSGT00530000063497.a	ENSGT00390000000224
Spotted gar	MODERN SPECIES	660	prdm12b (ENSLOCG00000005429)	ABL1 (ENSLOCG00000005460)	C5 (ENSLOCG00000005479)	ENSLOCG00000005496	rab14 (ENSLOCG00000005509)	gsna (ENSLOCG00000005526)	stom (ENSLOCG00000005541)	ttf1.1 (ENSLOCG00000005572)	cfap77 (ENSLOCG00000005588)	barhl1a (ENSLOCG00000005607)	DDX31 (ENSLOCG00000005630)	GTF3C4 (ENSLOCG00000005643)	ak8 (ENSLOCG00000005659)	spaca9 (ENSLOCG00000005672) #20	tsc1a (ENSLOCG00000005714) #21	GFI1B (ENSLOCG00000005750) #22	GTF3C5 (ENSLOCG00000005767) #23	cel.1 (ENSLOCG00000005785) #24	ralgds (ENSLOCG00000005803) #25	TBC1D13 (ENSLOCG00000005818)	zer1 (ENSLOCG00000005833)	ptgesl (ENSLOCG00000005855)	odf2b (ENSLOCG00000005870)	gle1 (ENSLOCG00000005909)	sptan1 (ENSLOCG00000005929)	dync2i2 (ENSLOCG00000005978)	dync2i2 (ENSLOCG00000005989)	si:ch211-51h9.7 (ENSLOCG00000006014)	setb (ENSLOCG00000006027)	ENSLOCG00000006047	zdhhc12a (ENSLOCG00000006071)
Osteoglossocephalai	ANCESTRAL SPECIES	203													ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000166112	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b	ENSGT00940000154254.a
Osteoglossiformes	ANCESTRAL SPECIES	232														ENSGT00390000011873.e.b	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000166112	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b.t	ENSGT00940000154254.a	ENSGT00940000155127.a.a
Asian bonytongue	MODERN SPECIES	21	dnm1a (ENSSFOG00015028490)	bbln (ENSSFOG00015030057)	surf2 (ENSSFOG00015010928)	surf4 (ENSSFOG00015010967)	ASS1 (ENSSFOG00015011000)	fubp3 (ENSSFOG00015011098)	PRDM12 (ENSSFOG00015026951)	exosc2 (ENSSFOG00015011245)	ABL1 (ENSSFOG00015011289)	RAB14 (ENSSFOG00015011318)	GSN (ENSSFOG00015011358)	STOM (ENSSFOG00015011409)	barhl1b (ENSSFOG00015025863)	GTF3C4 (ENSSFOG00015011515)	tsc1b (ENSSFOG00015011537) #21	GFI1B (ENSSFOG00015011566) #22	GTF3C5 (ENSSFOG00015011578) #23	cel.1 (ENSSFOG00015011611) #24	zgc:92275 (ENSSFOG00015011642)	grin1a (ENSSFOG00015013108)	ENTPD2 (ENSSFOG00015028372)	ENSSFOG00015011793	glulc (ENSSFOG00015011895)	ARRDC1 (ENSSFOG00015028770)	ehmt1b (ENSSFOG00015012030)	CACNA1B (ENSSFOG00015012198)	MAN1B1 (ENSSFOG00015012282)	WHRN (ENSSFOG00015012338)	ENSSFOG00015012387	stxbp1a (ENSSFOG00015012441)	ENSSFOG00015028006
P. kingsleyae	MODERN SPECIES	511															tsc1b (ENSPKIG00000007699) #21	GFI1B (ENSPKIG00000007643) #22	GTF3C5 (ENSPKIG00000007611) #23	cel.1 (ENSPKIG00000007560) #24	AJM1 (ENSPKIG00000007542)	RABL6 (ENSPKIG00000007459)	TRAF2 (ENSPKIG00000007397)	ENSPKIG00000007308	ENSPKIG00000007250
Clupeocephala	ANCESTRAL SPECIES	72					ENSGT00980000198604	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159718	ENSGT00940000153385.a	ENSGT00940000154143.c.b	ENSGT00940000159789	ENSGT00940000155591.j	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000163129	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b	ENSGT00940000154254.a
Otomorpha	ANCESTRAL SPECIES	60						ENSGT00940000156436	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000156959.A.c.b	ENSGT00940000155591.j	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT01100000263542.B.b.b	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000163129	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b
Clupeiformes	ANCESTRAL SPECIES	16	ENSGT00940000158673	ENSGT00940000161008.f	ENSGT00500000044945.b	ENSGT00390000000860.b.b	ENSGT00940000156436	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.b	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b	ENSGT00940000154254.a	ENSGT00940000155127.a.a
Atlantic herring	MODERN SPECIES	3	MYORG (ENSCHAG00000027176)	zgc:109965 (ENSCHAG00000027170)	fam219aa (ENSCHAG00000027165)	dnai1.2 (ENSCHAG00000027125)	ENSCHAG00000027110	VAV2 (ENSCHAG00000026325)	ENSCHAG00000026248	brd3a (ENSCHAG00000026243)	wdr5 (ENSCHAG00000026230)	ENSCHAG00000026104	gsna (ENSCHAG00000025935)	stom (ENSCHAG00000025887)	barhl1b (ENSCHAG00000025878)	GTF3C4 (ENSCHAG00000025874)	tsc1b (ENSCHAG00000025853) #21	GFI1B (ENSCHAG00000025850) #22	GTF3C5 (ENSCHAG00000025842) #23	CEL (ENSCHAG00000025837) #24	ENSCHAG00000025834	CEL (ENSCHAG00000025824) #24	CEL (ENSCHAG00000025807) #24	CEL (ENSCHAG00000025801) #24	ENSCHAG00000025790 #23	CEL (ENSCHAG00000025748) #24	zgc:92275 (ENSCHAG00000025732)	grin1a (ENSCHAG00000025691)	ENTPD2 (ENSCHAG00000025674)	phpt1 (ENSCHAG00000025669)	ENSCHAG00000025636	glulc (ENSCHAG00000025635)	ARRDC1 (ENSCHAG00000025627)
Denticle herring	MODERN SPECIES	13	zgc:109965 (ENSDCDG00000000422)	fam219aa (ENSDCDG00000000438)	DNAI1 (ENSDCDG00000000519)	ENSDCDG00000000533	ENSDCDG00000000537	VAV2 (ENSDCDG00000000609)	brd3a (ENSDCDG00000000738)	wdr5 (ENSDCDG00000000781)	RXRA (ENSDCDG00000000802)	gsna (ENSDCDG00000000909)	stom (ENSDCDG00000001446)	ENSDCDG00000001449	barhl1b (ENSDCDG00000001451)	GTF3C4 (ENSDCDG00000001453)	tsc1b (ENSDCDG00000001474) #21	GFI1B (ENSDCDG00000001514) #22	GTF3C5 (ENSDCDG00000001516) #23	cel.1 (ENSDCDG00000001528) #24	zgc:92275 (ENSDCDG00000001538)	grin1a (ENSDCDG00000001575)	ENTPD2 (ENSDCDG00000001696)	phpt1 (ENSDCDG00000001697)	ENSDCDG00000001700	glulc (ENSDCDG00000001704)	glulc (ENSDCDG00000001714)	ARRDC1 (ENSDCDG00000001716)	ehmt1b (ENSDCDG00000001776)	ENSDCDG00000002414	ENSDCDG00000002415	MAN1B1 (ENSDCDG00000002417)	ENSDCDG00000002423
Otophysi	ANCESTRAL SPECIES	241			ENSGT00940000156436	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000156959.A.c.b	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00940000153491.b.a.k	ENSGT00940000155668.i.a	ENSGT00940000165298.a.a	ENSGT00390000018018	ENSGT00950000183172.A	ENSGT01050000245132	ENSGT00390000012669	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a
Characiphysae	ANCESTRAL SPECIES	23	ENSGT00990000204687	ENSGT00940000156588	ENSGT00510000048998	ENSGT00940000156436	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00940000153491.b.a.k	ENSGT00940000159986	ENSGT00940000165298.a.a	ENSGT00390000018018	ENSGT00950000183172.A	ENSGT01050000245132	ENSGT00390000012669	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00440000038585.c	ENSGT00390000000571	ENSGT00390000004906.b
Characiphysae_b	ANCESTRAL SPECIES	21	ENSGT00990000204687	ENSGT00940000156588	ENSGT00510000048998	ENSGT00940000156436	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00940000153491.b.a.k	ENSGT00940000159986	ENSGT00940000165298.a.a	ENSGT00390000018018	ENSGT00950000183172.A	ENSGT01050000245132	ENSGT00390000012669	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00440000038585.c	ENSGT00390000000571	ENSGT00390000004906.b
Characoidei	ANCESTRAL SPECIES	467																ENSGT00940000160010 #22	ENSGT00940000153491.b.a.k	ENSGT00940000159986
Red-bellied piranha	MODERN SPECIES	615														ENSPNAG00000021178	ENSPNAG00000021153	GFI1B (ENSPNAG00000021118) #22	BCR (ENSPNAG00000021082)	atp2a2b (ENSPNAG00000020938)
Mexicana tetra	MODERN SPECIES	5	DTWD2 (ENSAMXG00000016515)	stard4 (ENSAMXG00000037985)	stard4 (ENSAMXG00000039662)	jak2a (ENSAMXG00000016504)	rln1 (ENSAMXG00000039024)	plgrkt (ENSAMXG00000029991)	ralgds (ENSAMXG00000016474) #25	ENSAMXG00000034143	TBC1D13 (ENSAMXG00000033986)	zer1 (ENSAMXG00000016425)	ENSAMXG00000042150	ENSAMXG00000016406	ENSAMXG00000038847	stk10 (ENSAMXG00000016383)	SH3PXD2B (ENSAMXG00000016359)	GFI1B (ENSAMXG00000037544) #22	BCR (ENSAMXG00000016321)	gpn3 (ENSAMXG00000016293)	arpc3 (ENSAMXG00000042266)	ube2g1b (ENSAMXG00000016275)	ENSAMXG00000016269	vps29 (ENSAMXG00000030298)	ENSAMXG00000039092	GTF3C5 (ENSAMXG00000016255) #23	cel.1 (ENSAMXG00000016230) #24	zgc:92275 (ENSAMXG00000016216)	grin1a (ENSAMXG00000030727)	MMP11 (ENSAMXG00000042400)	smarcb1b (ENSAMXG00000038492)	hmgcrb (ENSAMXG00000016175)	CERT1 (ENSAMXG00000016141)
Electric eel	MODERN SPECIES	76	ENSEEEG00000004292	ENSEEEG00000004283	dnai1.2 (ENSEEEG00000004241)	ENSEEEG00000004240	ENSEEEG00000004239	VAV2 (ENSEEEG00000004238)	brd3a (ENSEEEG00000004236)	wdr5 (ENSEEEG00000004129)	ENSEEEG00000004123	gsna (ENSEEEG00000003890)	ENSEEEG00000003872	stom (ENSEEEG00000003869)	barhl1b (ENSEEEG00000003868)	GTF3C4 (ENSEEEG00000003867)	ENSEEEG00000003853 #21	GFI1B (ENSEEEG00000003850) #22	ENSEEEG00000003849	BCR (ENSEEEG00000003845)	atp2a2b (ENSEEEG00000003792)	ube2g1b (ENSEEEG00000003787)	arpc3 (ENSEEEG00000003783)	gpn3 (ENSEEEG00000003781)	vps29 (ENSEEEG00000003777)	GTF3C5 (ENSEEEG00000003758) #23	cel.1 (ENSEEEG00000003754) #24	zgc:92275 (ENSEEEG00000003752)	grin1a (ENSEEEG00000003582)	ENTPD2 (ENSEEEG00000003554)	smarcb1b (ENSEEEG00000003506)	MMP11 (ENSEEEG00000003499)	ATP8B1 (ENSEEEG00000003495)
Channel catfish	MODERN SPECIES	9	cast (ENSIPUG00000011554)	cd8a (ENSIPUG00000011811)	cd8b (ENSIPUG00000011887)	ENSIPUG00000011933	dnai1 (ENSIPUG00000011953)	ENSIPUG00000012022	vav2 (ENSIPUG00000012072)	BRD3 (ENSIPUG00000012462)	wdr5 (ENSIPUG00000012532)	rxra (ENSIPUG00000012586)	gsna (ENSIPUG00000012618)	STOM (ENSIPUG00000012686)	barhl1b (ENSIPUG00000012709)	gtf3c4 (ENSIPUG00000012720)	tsc1b (ENSIPUG00000012741) #21	gfi1b (ENSIPUG00000012769) #22	bcr (ENSIPUG00000012796)	ENSIPUG00000012963	ube2g1b (ENSIPUG00000013199)	arpc3 (ENSIPUG00000013231)	gpn3 (ENSIPUG00000013244)	vps29 (ENSIPUG00000013313)	cel (ENSIPUG00000013351) #24	zgc:92275 (ENSIPUG00000013424)	grin1a (ENSIPUG00000013467)	ENTPD2 (ENSIPUG00000013795)	smarcb1 (ENSIPUG00000013824)	mmp11 (ENSIPUG00000013850)	atp8b1 (ENSIPUG00000013880)	dym (ENSIPUG00000013952)	smad7 (ENSIPUG00000014015)
Cyprinoidei	ANCESTRAL SPECIES	36				ENSGT00940000156436.w	ENSGT01040000240817	ENSGT00940000159718	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000156959.A.c.b	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00940000153491.b.a.k	ENSGT00940000155668.i.a	ENSGT00940000165298.a.a	ENSGT00390000018018	ENSGT00950000183172.A	ENSGT01050000245132	ENSGT00390000012669	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f
Zebrafish	MODERN SPECIES	13	TMEM132C (ENSDARG00000074863)	ENSDARG00000075837	RIMBP2 (ENSDARG00000104101)	DNAI1 (ENSDARG00000100081)	wdr5 (ENSDARG00000016903)	brd3a (ENSDARG00000006527)	VAV2 (ENSDARG00000044718)	dnai1.2 (ENSDARG00000038788)	stx2a (ENSDARG00000004618)	rxraa (ENSDARG00000057737)	gsna (ENSDARG00000011459)	stom (ENSDARG00000003835)	barhl1b (ENSDARG00000019013)	GTF3C4 (ENSDARG00000069538)	tsc1b (ENSDARG00000057918) #21	GFI1B (ENSDARG00000079947) #22	BCR (ENSDARG00000079286)	atp2a2b (ENSDARG00000005122)	ube2g1b (ENSDARG00000069527)	arpc3 (ENSDARG00000057882)	gpn3 (ENSDARG00000069525)	ENSDARG00000111211	vps29 (ENSDARG00000069521)	aqp3b (ENSDARG00000069518)	unc5da (ENSDARG00000092722)	tnfrsfa (ENSDARG00000004451)	ENSDARG00000092652	CYB561A3 (ENSDARG00000028257)	zgc:193801 (ENSDARG00000076552)	mzt2b (ENSDARG00000057928)	lhx5 (ENSDARG00000057936)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	428					ENSGT01040000240817.b	ENSGT00940000159718.o.b	ENSGT00940000162790.b.c.a	ENSGT00940000154143.d.d	ENSGT00940000156436.x.a	ENSGT00940000159789.r.a	ENSGT00940000155591.j.d	ENSGT01030000234614.B.a.a.a.v	ENSGT00940000160428.b.a.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e.a #21	ENSGT00940000160010.a.a #22	ENSGT00940000153491.b.a.k.b	ENSGT00940000155668.i.a.d	ENSGT00940000159895	ENSGT00940000165298.a.a.f	ENSGT00390000018018.h.a	ENSGT00950000183172.A.b	ENSGT01050000245132.b	ENSGT00390000012669.bc	ENSGT00950000182996.b.a.a.b.d.b.b.b.a	ENSGT00940000157242.a.b.c	ENSGT00950000182815.a.a.b.g.a	ENSGT00940000165531.b.b.b	ENSGT01070000253744.a.b.tb.b	ENSGT00950000183197.b.a.b.c	ENSGT00670000099470.a
Goldfish	MODERN SPECIES	13	ftsj1 (ENSCARG00000010517)	eif4ebp1 (ENSCARG00000010547)	ndr1 (ENSCARG00000010558)	htr1ab (ENSCARG00000010571)	rnf180b (ENSCARG00000010583)	rgs7bpb (ENSCARG00000010597)	brd3a (ENSCARG00000010623)	wdr5 (ENSCARG00000010679)	DNAI1 (ENSCARG00000010922)	rxraa (ENSCARG00000010953)	gsna (ENSCARG00000011100)	stom (ENSCARG00000013730)	barhl1b (ENSCARG00000014020)	GTF3C4 (ENSCARG00000014029)	tsc1b (ENSCARG00000014076) #21	GFI1B (ENSCARG00000014175) #22	BCR (ENSCARG00000014273)	ENSCARG00000016757	ube2g1b (ENSCARG00000019791)	arpc3 (ENSCARG00000019803)	gpn3 (ENSCARG00000019827)	ENSCARG00000019844	vps29 (ENSCARG00000019857)	ENSCARG00000019876	aqp3b (ENSCARG00000019882)	unc5da (ENSCARG00000019985)	tnfrsfa (ENSCARG00000022488)	ENSCARG00000022495	CYB561A3 (ENSCARG00000022502)	zgc:193801 (ENSCARG00000022553)	ENSCARG00000022568
Cyprininae_a	ANCESTRAL SPECIES	44	ENSGT00950000183203.c.a.b	ENSGT01030000234627.a.b.a.b.b.b	ENSGT00940000156436.w.a	ENSGT01040000240817.b	ENSGT00940000159718.o.b	ENSGT00940000162790.b.c.a	ENSGT00940000154143.d.d	ENSGT00940000156436.x.b	ENSGT00940000156436.x.a	ENSGT00940000159789.r.a	ENSGT00940000155591.j.d	ENSGT01030000234614.B.a.a.a.v	ENSGT00940000160428.b.a.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e.a #21	ENSGT00940000160010.a.a #22	ENSGT00940000153491.b.a.k.b	ENSGT00940000155668.i.a.d	ENSGT00940000159895	ENSGT00940000165298.a.a.f	ENSGT00390000018018.g	ENSGT00950000183172.A.b	ENSGT01050000245132.b	ENSGT00390000012669.bc	ENSGT00950000182996.b.a.a.b.d.b.b.b.a	ENSGT00940000157242.a.b.c	ENSGT00950000182815.a.a.b.g.a	ENSGT00940000165531.b.b.b	ENSGT01070000253744.a.b.tb.b	ENSGT00950000183197.b.a.b.c	ENSGT00670000099470.a
Common carp reference	MODERN SPECIES	45	ENSCCRG00000023977	ENSCCRG00000023964	stx2a (ENSCCRG00000048584)	dnai1.2 (ENSCCRG00000047227)	ENSCCRG00000030916	ENSCCRG00000048535	brd3a (ENSCCRG00000051597)	wdr5 (ENSCCRG00000052996)	ENSCCRG00000059080	ENSCCRG00000065099	rxraa (ENSCCRG00000051567)	gsna (ENSCCRG00000010766)	stom (ENSCCRG00000073303)	barhl1b (ENSCCRG00000054841)	ENSCCRG00000024487	ENSCCRG00000053262 #22	tsc1b (ENSCCRG00000024454) #21	ENSCCRG00000013335	ENSCCRG00000018700	ube2g1b (ENSCCRG00000054668)	gpn3 (ENSCCRG00000016495)	ENSCCRG00000016437	vps29 (ENSCCRG00000016419)	ENSCCRG00000053193	aqp3b (ENSCCRG00000055317)	unc5da (ENSCCRG00000078566)	tnfrsfa (ENSCCRG00000012874)	ENSCCRG00000026537	zgc:193801 (ENSCCRG00000012680)	mzt2b (ENSCCRG00000082452)	lhx5 (ENSCCRG00000078244)
Golden-line barbel	MODERN SPECIES	206										gsna (ENSSGRG00000026246)	stom (ENSSGRG00000026175)	barhl1b (ENSSGRG00000026174)	ENSSGRG00000026173	ENSSGRG00000026172	tsc1b (ENSSGRG00000026027) #21	GFI1B (ENSSGRG00000026025) #22	BCR (ENSSGRG00000025702)	ENSSGRG00000025676	ENSSGRG00000025673	ube2g1b (ENSSGRG00000025668)	ARPC3 (ENSSGRG00000025667)	gpn3 (ENSSGRG00000025584)	ENSSGRG00000025582	vps29 (ENSSGRG00000025565)	aqp3b (ENSSGRG00000025560)	unc5da (ENSSGRG00000025528)	tnfrsfa (ENSSGRG00000025525)	ENSSGRG00000025522	ENSSGRG00000025520	zgc:193801 (ENSSGRG00000025517)	mzt2b (ENSSGRG00000025516)
Cyprininae	ANCESTRAL SPECIES	141	ENSGT00390000006044.k	ENSGT00940000154702.a.b.b	ENSGT00940000166762.d	ENSGT00950000183203.c.a.a	ENSGT01030000234627.a.b.a.b.b.a	ENSGT00940000156436.w.b	ENSGT01040000240817.a	ENSGT00940000159718.o.a	ENSGT00940000162790.b.c.b	ENSGT00940000154143.d.c	ENSGT00940000159789.r.b	ENSGT00940000155591.j.c	ENSGT01030000234614.B.a.a.a.u	ENSGT00940000160428.b.a.a.b	ENSGT00390000014148.e.b #21	ENSGT00940000160010.a.b #22	ENSGT00940000153491.b.a.k.a	ENSGT00940000155668.i.a.c	ENSGT00940000165298.a.a.e	ENSGT00390000018018.h.b	ENSGT00950000183172.A.a	ENSGT01050000245132.a	ENSGT00390000012669.cc	ENSGT00940000157242.a.b.d	ENSGT00950000182815.a.a.b.g.b	ENSGT00940000165531.b.b.a	ENSGT01070000253744.a.b.tb.a	ENSGT00950000183197.b.a.b.d	ENSGT00670000099470.b	ENSGT00390000014845.`b	ENSGT00940000166328.a
Cyprininae_a	ANCESTRAL SPECIES	89	ENSGT00390000006044.k	ENSGT00940000154702.a.b.b	ENSGT00940000166762.d	ENSGT00950000183203.c.a.a	ENSGT01030000234627.a.b.a.b.b.a	ENSGT00940000156436.w.b	ENSGT01040000240817.a	ENSGT00940000159718.o.a	ENSGT00940000162790.b.c.b	ENSGT00940000154143.d.c	ENSGT00940000159789.r.b	ENSGT00940000155591.j.c	ENSGT01030000234614.B.a.a.a.u	ENSGT00940000160428.b.a.a.b	ENSGT00390000014148.e.b #21	ENSGT00940000160010.a.b #22	ENSGT00940000153491.b.a.k.a	ENSGT00940000155668.i.a.c	ENSGT00940000165298.a.a.e	ENSGT00390000018018.h.b	ENSGT01050000245132.a	ENSGT00390000012669.cc	ENSGT00940000157242.a.b.d
Golden-line barbel	MODERN SPECIES	583							ENSSGRG00000049213	ENSSGRG00000049214	wdr5 (ENSSGRG00000049241)	rxraa (ENSSGRG00000049278)	gsna (ENSSGRG00000049419)	stom (ENSSGRG00000051045)	barhl1b (ENSSGRG00000051046)	GTF3C4 (ENSSGRG00000051047)	tsc1b (ENSSGRG00000051053) #21	GFI1B (ENSSGRG00000051057) #22	BCR (ENSSGRG00000051065)	ENSSGRG00000051438	ube2g1b (ENSSGRG00000052303)	gpn3 (ENSSGRG00000052327)	ENSSGRG00000052357	vps29 (ENSSGRG00000052359)	aqp3b (ENSSGRG00000052368)
Common carp reference	MODERN SPECIES	38	med15 (ENSCCRG00000081800)	smpd4 (ENSCCRG00000048346)	ENSCCRG00000064563	ENSCCRG00000058288	ENSCCRG00000024984	ENSCCRG00000078045	stx2a (ENSCCRG00000010609)	ENSCCRG00000029921	brd3a (ENSCCRG00000049737)	wdr5 (ENSCCRG00000067522)	rxraa (ENSCCRG00000011147)	gsna (ENSCCRG00000024564)	stom (ENSCCRG00000077944)	barhl1b (ENSCCRG00000067379)	tsc1b (ENSCCRG00000024474) #21	ENSCCRG00000024437 #22	ENSCCRG00000019744	ENSCCRG00000016519	ube2g1b (ENSCCRG00000016500)	arpc3 (ENSCCRG00000016445)	vps29 (ENSCCRG00000062195)	ENSCCRG00000068815	aqp3b (ENSCCRG00000053298)	ENSCCRG00000061942	unc5da (ENSCCRG00000003275)	tnfrsfa (ENSCCRG00000040423)	ENSCCRG00000012871	zgc:193801 (ENSCCRG00000063885)	mzt2b (ENSCCRG00000076024)	lhx5 (ENSCCRG00000017204)	ENSCCRG00000074322
Goldfish	MODERN SPECIES	40	ncam1a (ENSCARG00000040159)	CADM1 (ENSCARG00000050689)	sptan1 (ENSCARG00000050784)	RIMBP2 (ENSCARG00000051278)	stx2a (ENSCARG00000051644)	ENSCARG00000051658	VAV2 (ENSCARG00000051803)	brd3a (ENSCARG00000053287)	ENSCARG00000053343	wdr5 (ENSCARG00000053384)	rxraa (ENSCARG00000053914)	gsna (ENSCARG00000054160)	stom (ENSCARG00000057497)	barhl1b (ENSCARG00000057552)	tsc1b (ENSCARG00000057588) #21	GFI1B (ENSCARG00000057704) #22	BCR (ENSCARG00000057853)	ENSCARG00000062220	ube2g1b (ENSCARG00000066668)	arpc3 (ENSCARG00000066694)	gpn3 (ENSCARG00000066724)	ENSCARG00000066735	vps29 (ENSCARG00000066770)	aqp3b (ENSCARG00000066859)	nipal4 (ENSCARG00000066881)	gria1b (ENSCARG00000066917)	tmsb (ENSCARG00000067157)	eif4ebp3 (ENSCARG00000067164)	ankhd1 (ENSCARG00000067312)	zgc:110540 (ENSCARG00000068819)	ENSCARG00000068829
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000160010.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000160010.b #22
Common carp reference	MODERN SPECIES	22	ENSCCRG00000067377	mogs (ENSCCRG00000032537)	ENSCCRG00000032541	ENSCCRG00000034366	ENSCCRG00000015981	dnaja1 (ENSCCRG00000074299)	ENSCCRG00000021857	rps6 (ENSCCRG00000021854)	ENSCCRG00000082498	ENSCCRG00000055220	ENSCCRG00000021846	ENSCCRG00000021839	ENSCCRG00000072725	ddx39aa (ENSCCRG00000065677)	ENSCCRG00000007982	ENSCCRG00000055968 #22	ENSCCRG00000016057	ENSCCRG00000066297	ENSCCRG00000079089	emp1 (ENSCCRG00000061539)	f8a (ENSCCRG00000021760)	ENSCCRG00000038242	si:ch211-243a20.3 (ENSCCRG00000021756)	grin2bb (ENSCCRG00000068265)	atf7ip (ENSCCRG00000052450)	septin3 (ENSCCRG00000061428)	serhl (ENSCCRG00000064245)	trappc5 (ENSCCRG00000041302)	mcoln1a (ENSCCRG00000052416)	ENSCCRG00000062759	si:ch211-214c7.5 (ENSCCRG00000052425)
Euteleosteomorpha	ANCESTRAL SPECIES	130									ENSGT00980000198604	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000155591.j	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000166112	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b
Protacanthopterygii	ANCESTRAL SPECIES	16	ENSGT00390000008694.b.a	ENSGT00940000165064.b	ENSGT00940000154909.b.a	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000159718	ENSGT00940000153385.a	ENSGT00940000162790.b	ENSGT00940000154143.d	ENSGT00940000159789	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a	ENSGT00940000160428.b.a.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00390000010047.h	ENSGT01010000222762.b	ENSGT00940000165582	ENSGT00940000169460	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00390000004511.c.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	553													ENSGT00940000160428.b.a.a.c	ENSGT00390000011873.f.d	ENSGT00390000014148.e.e #21	ENSGT00940000160010.c #22	ENSGT00390000004458.f #23	ENSGT00940000156231.o.a.j #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b.c	ENSGT01100000263542.B.b.a.a.c	ENSGT00390000002738.a.o	ENSGT00940000164772	ENSGT00940000159652.i.b	ENSGT01010000222762.b	ENSGT00940000165582.d	ENSGT00940000169460.j	ENSGT00530000063974.b.c	ENSGT00940000155826.d
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000166031.e	ENSGT00390000008694.b.a	ENSGT00940000165064.b.c	ENSGT00940000154909.b.a.f	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000159718.i.b	ENSGT00940000153385.a	ENSGT00940000154143.d.a	ENSGT00940000159789.s.a	ENSGT00940000155591.j.b	ENSGT01030000234614.B.a.a.a.r	ENSGT00940000160428.b.a.a.c	ENSGT00390000011873.f.d	ENSGT00390000014148.e.e #21	ENSGT00940000160010.c #22	ENSGT00390000004458.f #23	ENSGT00940000156231.o.a.j #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b.c	ENSGT01100000263542.B.b.a.a.c	ENSGT00390000002738.a.o	ENSGT00940000164772	ENSGT00940000159652.i.b	ENSGT01010000222762.b	ENSGT00940000165582.d	ENSGT00940000169460.j	ENSGT00530000063974.b.c	ENSGT00940000155826.d	ENSGT00390000004511.c.a.b.b
Salmo	ANCESTRAL SPECIES		ENSGT00940000166031.e	ENSGT00390000008694.b.a	ENSGT00940000165064.b.c	ENSGT00940000154909.b.a.f	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000159718.i.b	ENSGT00940000153385.a	ENSGT00940000154143.d.a	ENSGT00940000159789.s.a	ENSGT00940000155591.j.b	ENSGT01030000234614.B.a.a.a.r	ENSGT00940000160428.b.a.a.c	ENSGT00390000011873.f.d	ENSGT00390000014148.e.e #21	ENSGT00940000160010.c #22	ENSGT00390000004458.f #23	ENSGT00940000156231.o.a.j #24	ENSGT00390000016856.j	ENSGT00730000114714	ENSGT00940000158016.c.a.b.c	ENSGT01100000263542.B.b.a.a.c	ENSGT00390000002738.a.o	ENSGT00940000164772	ENSGT00940000159652.i.b	ENSGT01010000222762.b	ENSGT00940000175735.a	ENSGT00530000063974.b.c	ENSGT00940000155826.d	ENSGT00390000004511.c.a.b.b	ENSGT00940000154078.b.a.c
Atlantic salmon	MODERN SPECIES		ENSSSAG00000008833	ENSSSAG00000009148	ENSSSAG00000010187	ENSSSAG00000009191	ENSSSAG00000009235	ENSSSAG00000009589	ENSSSAG00000105829	ENSSSAG00000048401	ENSSSAG00000070171	rxraa (ENSSSAG00000048597)	gsna (ENSSSAG00000054710)	stom (ENSSSAG00000066152)	barh1 (ENSSSAG00000062861)	GTF3C4 (ENSSSAG00000066132)	tsc1b (ENSSSAG00000062874) #21	GFI1B (ENSSSAG00000062888) #22	ENSSSAG00000084283	CEL (ENSSSAG00000062912) #24	zgc:92275 (ENSSSAG00000063102)	ENSSSAG00000104251	grin1a (ENSSSAG00000063224)	ENSSSAG00000068519	ENSSSAG00000092123	ENSSSAG00000068536	ENSSSAG00000068594	ENSSSAG00000098096	ENSSSAG00000068653	ENSSSAG00000068801	ENSSSAG00000117740	ENSSSAG00000068811	ENSSSAG00000109319
River trout	MODERN SPECIES	15	ENSSTUG00000016011	tmem230a (ENSSTUG00000016017)	ENSSTUG00000016045	LRRTM4 (ENSSTUG00000016100)	ENSSTUG00000016108	ENSSTUG00000016155	VAV2 (ENSSTUG00000016325)	ENSSTUG00000023089	wdr5 (ENSSTUG00000023135)	rxraa (ENSSTUG00000023308)	gsna (ENSSTUG00000024228)	stom (ENSSTUG00000024511)	barhl1b (ENSSTUG00000024762)	GTF3C4 (ENSSTUG00000024772)	tsc1b (ENSSTUG00000024801) #21	GFI1B (ENSSTUG00000024861) #22	GTF3C5 (ENSSTUG00000024890) #23	CEL (ENSSTUG00000024906) #24	zgc:92275 (ENSSTUG00000024951)	ENSSTUG00000024967	grin1a (ENSSTUG00000025010)	ENTPD2 (ENSSTUG00000025430)	phpt1 (ENSSTUG00000025495)	ENSSTUG00000025506	ARRDC1 (ENSSTUG00000025531)	ENSSTUG00000025579	ENSSTUG00000025588	ENSSTUG00000025608	ENSSTUG00000025622	ENSSTUG00000025634	MCC (ENSSTUG00000003645)
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00390000008694.b.a	ENSGT00940000165064.b.c	ENSGT00940000154909.b.a.f	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000159718.i.b	ENSGT00940000153385.a	ENSGT00940000154143.d.a	ENSGT00940000159789.s.a	ENSGT00970000197827.b	ENSGT00940000155591.j.b	ENSGT01030000234614.B.a.a.a.r	ENSGT00940000160428.b.a.a.c	ENSGT00390000011873.f.d	ENSGT00390000014148.e.e #21	ENSGT00940000160010.c #22	ENSGT00390000004458.f #23	ENSGT00940000156231.o.a.j #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b.c	ENSGT01100000263542.B.b.a.a.c	ENSGT00390000002738.a.o	ENSGT00940000164772	ENSGT00940000159652.i.b	ENSGT01010000222762.b	ENSGT00940000165582.d	ENSGT00940000169460.j	ENSGT00530000063974.b.c	ENSGT00940000155826.d	ENSGT00390000004511.c.a.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00390000008694.b.a	ENSGT00940000165064.b.c	ENSGT00940000154909.b.a.f	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000159718.i.b	ENSGT00940000153385.a	ENSGT00940000154143.d.a	ENSGT00940000159789.s.a	ENSGT00970000197827.b	ENSGT00940000155591.j.b	ENSGT01030000234614.B.a.a.a.r	ENSGT00940000160428.b.a.a.c	ENSGT00390000011873.f.d	ENSGT00390000014148.e.e #21	ENSGT00940000160010.c #22	ENSGT00390000004458.f #23	ENSGT00940000156231.o.a.j #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b.c	ENSGT01100000263542.B.b.a.a.c	ENSGT00390000002738.a.o	ENSGT00940000164772	ENSGT00940000159652.i.b	ENSGT01010000222762.b	ENSGT00940000165582.d	ENSGT00940000169460.j	ENSGT00530000063974.b.c	ENSGT00940000155826.d	ENSGT00390000004511.c.a.b.b
Coho salmon	MODERN SPECIES	15	tmem230a (ENSOKIG00005006652)	ENSOKIG00005006665	LRRTM4 (ENSOKIG00005006683)	ENSOKIG00005006690	ENSOKIG00005006721	VAV2 (ENSOKIG00005006822)	ENSOKIG00005008210	ENSOKIG00005008258	rxraa (ENSOKIG00005008370)	ENSOKIG00005008483	gsna (ENSOKIG00005008536)	stom (ENSOKIG00005008883)	barhl1b (ENSOKIG00005008984)	GTF3C4 (ENSOKIG00005009006)	tsc1b (ENSOKIG00005009019) #21	GFI1B (ENSOKIG00005009042) #22	GTF3C5 (ENSOKIG00005009052) #23	CEL (ENSOKIG00005009131) #24	zgc:92275 (ENSOKIG00005009300)	grin1a (ENSOKIG00005009364)	ENTPD2 (ENSOKIG00005009957)	phpt1 (ENSOKIG00005009984)	ENSOKIG00005009994	ARRDC1 (ENSOKIG00005010013)	ENSOKIG00005010049	ENSOKIG00005010065	ENSOKIG00005010134	MCC (ENSOKIG00005010156)	ENSOKIG00005010198	LZTS3 (ENSOKIG00005010214)	ENSOKIG00005010229
Chinook salmon	MODERN SPECIES	12	tmem230a (ENSOTSG00005005975)	ENSOTSG00005005973	LRRTM4 (ENSOTSG00005005971)	ENSOTSG00005005970	ENSOTSG00005005968	VAV2 (ENSOTSG00005005672)	ENSOTSG00005005665	wdr5 (ENSOTSG00005005663)	rxraa (ENSOTSG00005005632)	ENSOTSG00005005625	gsna (ENSOTSG00005004030)	stom (ENSOTSG00005003760)	barhl1b (ENSOTSG00005003751)	GTF3C4 (ENSOTSG00005003749)	tsc1b (ENSOTSG00005003736) #21	GFI1B (ENSOTSG00005003730) #22	GTF3C5 (ENSOTSG00005003298) #23	CEL (ENSOTSG00005002959) #24	zgc:92275 (ENSOTSG00005002937)	ENSOTSG00005002928	grin1a (ENSOTSG00005002272)	ENTPD2 (ENSOTSG00005002245)	phpt1 (ENSOTSG00005002242)	ENSOTSG00005002239	ARRDC1 (ENSOTSG00005002233)	ENSOTSG00005002230	ENSOTSG00005002225	wu:fb59d01 (ENSOTSG00005002221)	MCC (ENSOTSG00005002069)	YTHDC2 (ENSOTSG00005013054)	ENSOTSG00005013053
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000034983	ENSOMYG00000055983	ENSOMYG00000034975	ENSOMYG00000034292	ENSOMYG00000034111	ENSOMYG00000033842	rxraa (ENSOMYG00000033924)	ENSOMYG00000061732	ENSOMYG00000060025	gsna (ENSOMYG00000032978)	stom (ENSOMYG00000044336)	barhl1b (ENSOMYG00000032513)	GTF3C4 (ENSOMYG00000032503)	tsc1b (ENSOMYG00000032484) #21	ENSOMYG00000048581	GFI1B (ENSOMYG00000032431) #22	GTF3C5 (ENSOMYG00000032400) #23	CEL (ENSOMYG00000032026) #24	zgc:92275 (ENSOMYG00000031872)	grin1a (ENSOMYG00000031564)	ENSOMYG00000031419	phpt1 (ENSOMYG00000069268)	ENSOMYG00000031200	ENSOMYG00000031112	ENSOMYG00000031095	ENSOMYG00000031082	ENSOMYG00000031058	ENSOMYG00000031035	ENSOMYG00000031005	ENSOMYG00000030998	ENSOMYG00000030992
Huchen	MODERN SPECIES	639											barhl1b (ENSHHUG00000039275)	GTF3C4 (ENSHHUG00000039286)	tsc1b (ENSHHUG00000039295) #21	ENSHHUG00000039311	ENSHHUG00000039316	GFI1B (ENSHHUG00000039327) #22	GTF3C5 (ENSHHUG00000039331) #23	CEL (ENSHHUG00000039340) #24	zgc:92275 (ENSHHUG00000039405)	grin1a (ENSHHUG00000039426)	ENTPD2 (ENSHHUG00000039594)	ENSHHUG00000039609	ARRDC1 (ENSHHUG00000039615)	ENSHHUG00000039621	ENSHHUG00000039627	ENSHHUG00000039635	wu:fb59d01 (ENSHHUG00000039652)	ENSHHUG00000039664	MCC (ENSHHUG00000039672)	YTHDC2 (ENSHHUG00000039688)
Salmoninae	ANCESTRAL SPECIES	204	ENSGT00950000182864.a.b.b.a.a.a.c	ENSGT00390000013415.a.b.jb.d	ENSGT01030000234527.A.a.b.a.a.c.a.a	ENSGT00940000166031.f	ENSGT00940000165064.b.d	ENSGT00940000154909.b.a.e	ENSGT00940000159718.i.a	ENSGT00940000162790.b.j	ENSGT00940000154143.d.b	ENSGT00940000159789.s.b	ENSGT00940000155591.j.a	ENSGT01030000234614.B.a.a.a.q	ENSGT00940000160428.b.a.a.d	ENSGT00390000011873.f.c	ENSGT00390000014148.e.f #21	ENSGT00940000160010.d #22	ENSGT00390000004458.e.a #23	ENSGT00390000004458.e.b #23	ENSGT00940000156231.o.a.i #24	ENSGT00940000158016.c.a.b.d	ENSGT01100000263542.B.b.a.a.d	ENSGT00390000002738.a.p	ENSGT00940000164732.C	ENSGT00390000010047.h	ENSGT00940000159652.i.a	ENSGT00940000165582.c	ENSGT00940000169460.i	ENSGT00530000063974.b.d	ENSGT00940000155826.c	ENSGT00390000004511.c.a.b.a	ENSGT01030000234607.A.a.b.b
Huchen	MODERN SPECIES	1	ENSHHUG00000004700	ENSHHUG00000004735	LRRTM4 (ENSHHUG00000004806)	ENSHHUG00000004845	VAV2 (ENSHHUG00000004868)	brd3a (ENSHHUG00000005527)	wdr5 (ENSHHUG00000005551)	rxraa (ENSHHUG00000005631)	ENSHHUG00000006106	gsna (ENSHHUG00000006133)	ENSHHUG00000006629	stom (ENSHHUG00000006634)	barhl1b (ENSHHUG00000006667)	GTF3C4 (ENSHHUG00000006707)	tsc1b (ENSHHUG00000006723) #21	GFI1B (ENSHHUG00000006754) #22	GTF3C5 (ENSHHUG00000006765) #23	CEL (ENSHHUG00000006774) #24	grin1a (ENSHHUG00000006793)	ENTPD2 (ENSHHUG00000006861)	phpt1 (ENSHHUG00000006891)	ENSHHUG00000006912	ARRDC1 (ENSHHUG00000006980)	ENSHHUG00000006997	wu:fb59d01 (ENSHHUG00000007027)	MCC (ENSHHUG00000007071)	YTHDC2 (ENSHHUG00000007305)	ENSHHUG00000007340	FASTKD5 (ENSHHUG00000007348)	LZTS3 (ENSHHUG00000007357)	spra (ENSHHUG00000007382)
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00390000013415.a.b.jb.d	ENSGT01030000234527.A.a.b.a.a.c.a.a	ENSGT00940000166031.f	ENSGT00940000165064.b.d	ENSGT00940000154909.b.a.e	ENSGT00940000159718.i.a	ENSGT00940000162790.b.j	ENSGT00940000154143.d.b	ENSGT00940000159789.s.b	ENSGT01040000240782.a.b	ENSGT00940000155591.j.a	ENSGT01030000234614.B.a.a.a.q	ENSGT00940000160428.b.a.a.d	ENSGT00390000011873.f.c	ENSGT00390000014148.e.f #21	ENSGT00940000160010.d #22	ENSGT00390000004458.e.a #23	ENSGT00390000004458.e.b #23	ENSGT00940000156231.o.a.i #24	ENSGT00940000158016.c.a.b.d	ENSGT01100000263542.B.b.a.a.d	ENSGT00390000002738.a.p	ENSGT00940000164732.C	ENSGT00390000010047.h	ENSGT00940000159652.i.a	ENSGT00940000165582.c	ENSGT00940000169460.i	ENSGT00530000063974.b.d	ENSGT00940000155826.c	ENSGT00390000004511.c.a.b.a	ENSGT01030000234607.A.a.b.b
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00390000013415.a.b.jb.d	ENSGT01030000234527.A.a.b.a.a.c.a.a	ENSGT00940000166031.f	ENSGT00940000165064.b.d	ENSGT00940000154909.b.a.e	ENSGT00940000159718.i.a	ENSGT00940000162790.b.j	ENSGT00940000154143.d.b	ENSGT00940000159789.s.b	ENSGT01040000240782.a.b	ENSGT00940000155591.j.a	ENSGT01030000234614.B.a.a.a.q	ENSGT00940000160428.b.a.a.d	ENSGT00390000011873.f.c	ENSGT00390000014148.e.f #21	ENSGT00940000160010.d #22	ENSGT00390000004458.e.a #23	ENSGT00940000156231.o.a.i.b #24	ENSGT00390000004458.e.b #23	ENSGT00940000156231.o.a.i.a #24	ENSGT00940000158016.c.a.b.d	ENSGT01100000263542.B.b.a.a.d.a	ENSGT00390000002738.a.p	ENSGT00940000164732.C	ENSGT00940000159652.i.a	ENSGT00940000165582.c	ENSGT00940000169460.i	ENSGT00530000063974.b.d	ENSGT00940000155826.c	ENSGT00390000004511.c.a.b.a	ENSGT01030000234607.A.a.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	20	ENSGT00390000013415.a.b.jb.d	ENSGT01030000234527.A.a.b.a.a.c.a.a	ENSGT00940000166031.f	ENSGT00940000165064.b.d	ENSGT00940000154909.b.a.e	ENSGT00940000159718.i.a	ENSGT00940000162790.b.j	ENSGT00940000154143.d.b	ENSGT00940000159789.s.b	ENSGT01040000240782.a.b	ENSGT00940000155591.j.a	ENSGT01030000234614.B.a.a.a.q	ENSGT00940000160428.b.a.a.d	ENSGT00390000011873.f.c	ENSGT00390000014148.e.f #21	ENSGT00940000160010.d #22	ENSGT00390000004458.e.a #23	ENSGT00940000156231.o.a.i.b #24	ENSGT00390000004458.e.b #23	ENSGT00940000156231.o.a.i.a #24	ENSGT00940000158016.c.a.b.d	ENSGT01100000263542.B.b.a.a.d.a	ENSGT00390000002738.a.p	ENSGT00940000164732.C	ENSGT00940000159652.i.a	ENSGT00940000165582.c	ENSGT00940000169460.i	ENSGT00530000063974.b.d	ENSGT00940000155826.c	ENSGT00390000004511.c.a.b.a	ENSGT01030000234607.A.a.b.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	26	dpysl2b (ENSOTSG00005019516)	ENSOTSG00005019473	LRRTM4 (ENSOTSG00005019472)	VAV2 (ENSOTSG00005015446)	ENSOTSG00005015439	brd3a (ENSOTSG00005015422)	wdr5 (ENSOTSG00005015304)	rxraa (ENSOTSG00005012599)	ENSOTSG00005012581	ENSOTSG00005012579	gsna (ENSOTSG00005011143)	stom (ENSOTSG00005010841)	barhl1b (ENSOTSG00005010835)	GTF3C4 (ENSOTSG00005010832)	tsc1b (ENSOTSG00005010827) #21	GFI1B (ENSOTSG00005010823) #22	GTF3C5 (ENSOTSG00005010800) #23	ENSOTSG00005010546 #24	ENSOTSG00005010404 #23	CEL (ENSOTSG00005010403) #24	grin1a (ENSOTSG00005010180)	ENSOTSG00005010174	ENTPD2 (ENSOTSG00005010106)	ENSOTSG00005010102	ARRDC1 (ENSOTSG00005010095)	ENSOTSG00005010093	wu:fb59d01 (ENSOTSG00005010091)	MCC (ENSOTSG00005010058)	ENSOTSG00005010056	YTHDC2 (ENSOTSG00005010051)	FASTKD5 (ENSOTSG00005010049)
Chinook salmon	MODERN SPECIES	47															ENSOTSG00005033778 #21	GFI1B (ENSOTSG00005033781) #22	GTF3C5 (ENSOTSG00005033787) #23	ENSOTSG00005033792 #24	ENSOTSG00005033829 #23	CEL (ENSOTSG00005033830) #24	grin1a (ENSOTSG00005033835)	ENTPD2 (ENSOTSG00005033845)	phpt1 (ENSOTSG00005033850)	ENSOTSG00005033852	ARRDC1 (ENSOTSG00005033854)	ENSOTSG00005033855	wu:fb59d01 (ENSOTSG00005033857)	MCC (ENSOTSG00005033860)	YTHDC2 (ENSOTSG00005034212)	ENSOTSG00005034227	FASTKD5 (ENSOTSG00005034230)
Coho salmon	MODERN SPECIES	21	bnip3lb (ENSOKIG00005047507)	dpysl2b (ENSOKIG00005046724)	ENSOKIG00005046670	ENSOKIG00005046651	ENSOKIG00005046645	LRRTM4 (ENSOKIG00005046643)	brd3a (ENSOKIG00005046625)	wdr5 (ENSOKIG00005046508)	VAV2 (ENSOKIG00005042074)	gsna (ENSOKIG00005038737)	stom (ENSOKIG00005038547)	barhl1b (ENSOKIG00005038510)	ENSOKIG00005038507	GTF3C4 (ENSOKIG00005038493)	tsc1b (ENSOKIG00005038437) #21	GFI1B (ENSOKIG00005038423) #22	GTF3C5 (ENSOKIG00005038339) #23	ENSOKIG00005038294 #24	GTF3C5 (ENSOKIG00005038251) #23	CEL (ENSOKIG00005036501) #24	grin1a (ENSOKIG00005036255)	ENTPD2 (ENSOKIG00005035783)	ENSOKIG00005035748	PHPT1 (ENSOKIG00005035684)	ENSOKIG00005035556	ARRDC1 (ENSOKIG00005035529)	ENSOKIG00005035333	wu:fb59d01 (ENSOKIG00005035288)	MCC (ENSOKIG00005034379)	YTHDC2 (ENSOKIG00005034208)	ENSOKIG00005034178
Rainbow trout	MODERN SPECIES	364	bnip3lb (ENSOMYG00000044294)	dpysl2b (ENSOMYG00000044108)	ENSOMYG00000056268	ENSOMYG00000044065	ENSOMYG00000044052	ENSOMYG00000039285	ENSOMYG00000044040	wdr5 (ENSOMYG00000043450)	ENSOMYG00000043308	ENSOMYG00000051476	gsna (ENSOMYG00000044376)	barhl1b (ENSOMYG00000044346)	stom (ENSOMYG00000055625)	GTF3C4 (ENSOMYG00000044326)	tsc1b (ENSOMYG00000044309) #21	GFI1B (ENSOMYG00000044288) #22	GTF3C5 (ENSOMYG00000044281) #23	GTF3C5 (ENSOMYG00000044271) #23	CEL (ENSOMYG00000044259) #24	grin1a (ENSOMYG00000042242)	ENSOMYG00000041958	ENSOMYG00000041936	ENSOMYG00000041914	ENSOMYG00000041901	ENSOMYG00000041870	ENSOMYG00000069150	ENSOMYG00000041727	ENSOMYG00000041661	ENSOMYG00000041647	ENSOMYG00000041645	ENSOMYG00000041641
Salmo	ANCESTRAL SPECIES	1	ENSGT00390000013415.a.b.jb.d	ENSGT01030000234527.A.a.b.a.a.c.a.a	ENSGT00940000166031.f	ENSGT00940000165064.b.d	ENSGT00940000154909.b.a.e	ENSGT00940000159718.i.a	ENSGT00940000162790.b.j	ENSGT00940000154143.d.b	ENSGT00940000159789.s.b	ENSGT01040000240782.a.b	ENSGT00940000155591.j.a	ENSGT01030000234614.B.a.a.a.q	ENSGT00940000160428.b.a.a.d	ENSGT00390000011873.f.c	ENSGT00390000014148.e.f #21	ENSGT00940000160010.d #22	ENSGT00390000004458.e.a #23	ENSGT00390000004458.e.b #23	ENSGT00940000156231.o.a.i #24	ENSGT00390000016856.i	ENSGT00940000158016.c.a.b.d	ENSGT01100000263542.B.b.a.a.d	ENSGT00390000002738.a.p	ENSGT00940000164732.C	ENSGT00390000010047.h	ENSGT00940000159652.i.a	ENSGT00940000175735.b	ENSGT00980000202187	ENSGT00940000169460.i	ENSGT00530000063974.b.d	ENSGT00940000155826.c
River trout	MODERN SPECIES	3	bnip3lb (ENSSTUG00000029847)	dpysl2b (ENSSTUG00000027115)	ENSSTUG00000027056	ENSSTUG00000026982	ENSSTUG00000026965	LRRTM4 (ENSSTUG00000026961)	VAV2 (ENSSTUG00000024865)	brd3a (ENSSTUG00000024749)	wdr5 (ENSSTUG00000024581)	rxraa (ENSSTUG00000024378)	gsna (ENSSTUG00000024007)	stom (ENSSTUG00000023910)	barhl1b (ENSSTUG00000023880)	GTF3C4 (ENSSTUG00000023869)	tsc1b (ENSSTUG00000023464) #21	GFI1B (ENSSTUG00000023434) #22	GTF3C5 (ENSSTUG00000023362) #23	GTF3C5 (ENSSTUG00000023269) #23	CEL (ENSSTUG00000022858) #24	grin1a (ENSSTUG00000022505)	ENTPD2 (ENSSTUG00000022137)	phpt1 (ENSSTUG00000022103)	ENSSTUG00000022052	GLUL (ENSSTUG00000022042)	ARRDC1 (ENSSTUG00000022010)	ENSSTUG00000021809	wu:fb59d01 (ENSSTUG00000021791)	MCC (ENSSTUG00000021369)	YTHDC2 (ENSSTUG00000021254)	ENSSTUG00000021238	FASTKD5 (ENSSTUG00000021226)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000093844	ENSSSAG00000010207	ENSSSAG00000085699	ENSSSAG00000009170	ENSSSAG00000087264	ENSSSAG00000004647	ENSSSAG00000004189	wdr5 (ENSSSAG00000048469)	rxraa (ENSSSAG00000067352)	ENSSSAG00000067284	gsna (ENSSSAG00000066224)	stom (ENSSSAG00000112434)	barhl1b (ENSSSAG00000098132)	GTF3C4 (ENSSSAG00000062866)	tsc1b (ENSSSAG00000064276) #21	GFI1B (ENSSSAG00000064243) #22	GTF3C5 (ENSSSAG00000064231) #23	ENSSSAG00000064205 #23	CEL (ENSSSAG00000064173) #24	zgc:92275 (ENSSSAG00000064164)	ENSSSAG00000109914	ENSSSAG00000095525	enp2 (ENSSSAG00000064037)	ENSSSAG00000063978	ENSSSAG00000063952	ENSSSAG00000063912	ENSSSAG00000063896	ENSSSAG00000059729	ENSSSAG00000058261	ENSSSAG00000083074	ENSSSAG00000058209
Northern pike	MODERN SPECIES	13	LRRTM4 (ENSELUG00000017727)	ENSELUG00000000709	ENSELUG00000017689	VAV2 (ENSELUG00000017648)	brd3a (ENSELUG00000017366)	wdr5 (ENSELUG00000017301)	ENSELUG00000017162	rxraa (ENSELUG00000000650)	ENSELUG00000017155	gsna (ENSELUG00000017126)	stom (ENSELUG00000017049)	ENSELUG00000017024	barhl1b (ENSELUG00000017008)	GTF3C4 (ENSELUG00000016991)	tsc1b (ENSELUG00000016974) #21	gfi1b (ENSELUG00000016933) #22	GTF3C5 (ENSELUG00000016886) #23	zgc:92275 (ENSELUG00000016809)	grin1a (ENSELUG00000016714)	ENTPD2 (ENSELUG00000016455)	PHP14 (ENSELUG00000033807)	ARRDC1 (ENSELUG00000016344)	ENSELUG00000016270	ENSELUG00000016321	wu:fb59d01 (ENSELUG00000016257)	MCC (ENSELUG00000016191)	YTHDC2 (ENSELUG00000015902)	FASTKD5 (ENSELUG00000015818)	LZTS3 (ENSELUG00000000592)	DDRGK1 (ENSELUG00000015756)	spra (ENSELUG00000015739)
Acanthomorphata	ANCESTRAL SPECIES	103	ENSGT00940000153385.a	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00730000114714	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000166112	ENSGT00940000155422.cb
Euacanthomorphacea	ANCESTRAL SPECIES	68	ENSGT00940000154143.c.b	ENSGT00940000153385.a	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.a	ENSGT00940000155275.c.a	ENSGT00940000166112	ENSGT00940000155422.cb	ENSGT00950000183002.B.a.b
Pinecone sodierfish	MODERN SPECIES	3	tjp2a (ENSMMDG00005006164)	ENSMMDG00005006832	MAMDC2 (ENSMMDG00005007062)	slc30a5 (ENSMMDG00005007116)	ANXA1 (ENSMMDG00005009171)	TMC2 (ENSMMDG00005009229)	zfand5b (ENSMMDG00005009237)	ccnb1 (ENSMMDG00005009241)	ENSMMDG00005009244	ENSMMDG00005009247	ENSMMDG00005009254	alad (ENSMMDG00005009319)	tmem203 (ENSMMDG00005010174)	ENSMMDG00005010176	ssna1 (ENSMMDG00005010177)	GFI1B (ENSMMDG00005010180) #22	GTF3C5 (ENSMMDG00005010183) #23	CEL (ENSMMDG00005010186) #24	CEL (ENSMMDG00005010270) #24	CEL (ENSMMDG00005010276) #24	CEL (ENSMMDG00005010281) #24	CEL (ENSMMDG00005010283) #24	CEL (ENSMMDG00005010287) #24	CEL (ENSMMDG00005010290) #24	zgc:92275 (ENSMMDG00005010292)	ENSMMDG00005010294	grin1a (ENSMMDG00005010304)	ENTPD2 (ENSMMDG00005010386)	phpt1 (ENSMMDG00005010390)	ENSMMDG00005010394	glulc (ENSMMDG00005010397)
Percomorphaceae	ANCESTRAL SPECIES	41	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000178491	ENSGT00940000155591.j	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Tiger tail seahorse	MODERN SPECIES	78	VAV2 (ENSHCOG00000013342)	LRRTM4 (ENSHCOG00000013364)	ENSHCOG00000013371	tmem230a (ENSHCOG00000013384)	ENSHCOG00000013398	dpysl2b (ENSHCOG00000013419)	bnip3lb (ENSHCOG00000013441)	ppp2r2ab (ENSHCOG00000013473)	ENSHCOG00000013480	gsna (ENSHCOG00000013545)	stom (ENSHCOG00000013563)	barhl1a (ENSHCOG00000013579)	GTF3C4 (ENSHCOG00000013608)	ENSHCOG00000013617	tsc1b (ENSHCOG00000013703) #21	GFI1B (ENSHCOG00000013713) #22	GTF3C5 (ENSHCOG00000013732) #23	CEL (ENSHCOG00000013810) #24	ENSHCOG00000013893	ENSHCOG00000013950	ENSHCOG00000014003	ENSHCOG00000014016	ENSHCOG00000014043	ENSHCOG00000000824	chsy3 (ENSHCOG00000014054)	sptlc1 (ENSHCOG00000014091)	ROR2 (ENSHCOG00000014104)	nfil3 (ENSHCOG00000014107)	auh (ENSHCOG00000014115)	syk (ENSHCOG00000014174)	chd1 (ENSHCOG00000014222)
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000178491	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000178491	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Oryzias	ANCESTRAL SPECIES	9						ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.g #24	ENSGT00940000156231.o.a.g.h #24	ENSGT01030000234601.n.a.a.b.a	ENSGT00530000064469	ENSGT00390000016856	ENSGT00940000158016.c.a.b.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000155603.A.a.a.a	ENSGT00950000183162.b	ENSGT00390000005646	ENSGT00940000157326	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.g #24	ENSGT00940000156231.o.a.g.h #24	ENSGT01030000234601.n.a.a.b.a	ENSGT00530000064469	ENSGT00390000016856	ENSGT00940000158016.c.a.b.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000154254.a
Indian medaka	MODERN SPECIES	438	PURG (ENSOMEG00000015895)	slc38a9 (ENSOMEG00000015869)	nrg1 (ENSOMEG00000015770)	ENSOMEG00000015756	ENSOMEG00000015750	sh3glb2b (ENSOMEG00000015740)	zer1 (ENSOMEG00000015697)	TBC1D13 (ENSOMEG00000015599)	thnsl2 (ENSOMEG00000015524)	DQX1 (ENSOMEG00000015481)	smyd1a (ENSOMEG00000015440)	spra (ENSOMEG00000015421)	slc1a3b (ENSOMEG00000015398)	nadk2 (ENSOMEG00000015330)	tsc1b (ENSOMEG00000015219) #21	GFI1B (ENSOMEG00000015149) #22	GTF3C5 (ENSOMEG00000015122) #23	CEL (ENSOMEG00000015068) #24	CEL (ENSOMEG00000015035) #24
Javanese ricefish	MODERN SPECIES	3	slc38a9 (ENSOJAG00000009580)	nrg1 (ENSOJAG00000010126)	ENSOJAG00000010138	sh3glb2b (ENSOJAG00000010167)	zer1 (ENSOJAG00000010368)	ENSOJAG00000010536	TBC1D13 (ENSOJAG00000010630)	thnsl2 (ENSOJAG00000011084)	DQX1 (ENSOJAG00000011115)	smyd1a (ENSOJAG00000011145)	spra (ENSOJAG00000011251)	ENSOJAG00000011257	slc1a3b (ENSOJAG00000011276)	nadk2 (ENSOJAG00000011567)	tsc1b (ENSOJAG00000011601) #21	GFI1B (ENSOJAG00000011634) #22	GTF3C5 (ENSOJAG00000011643) #23	CEL (ENSOJAG00000001688) #24	CEL (ENSOJAG00000001840) #24	ENSOJAG00000002035	ENSOJAG00000002046	ENSOJAG00000002073	ENSOJAG00000002139	zgc:92275 (ENSOJAG00000002149)	grin1a (ENSOJAG00000002456)	ENTPD2 (ENSOJAG00000003287)	phpt1 (ENSOJAG00000003296)	ENSOJAG00000003304	ENSOJAG00000003318	ARRDC1 (ENSOJAG00000003335)	slc31a2 (ENSOJAG00000003422)
Oryzias_a	ANCESTRAL SPECIES	99						ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00390000006320	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.g #24	ENSGT00940000156231.o.a.g.h #24	ENSGT01030000234601.n.a.a.b.a.h	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000159053	ENSGT00940000156579	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000157703.f
Chinese medaka	MODERN SPECIES	294							spra (ENSOSIG00000006155)	smyd1a (ENSOSIG00000006154)	DQX1 (ENSOSIG00000006150)	thnsl2 (ENSOSIG00000006148)	TBC1D13 (ENSOSIG00000005458)	zer1 (ENSOSIG00000005438)	sh3glb2b (ENSOSIG00000005349)	nadk2 (ENSOSIG00000005340)	tsc1b (ENSOSIG00000005329) #21	GFI1B (ENSOSIG00000005326) #22	GTF3C5 (ENSOSIG00000005324) #23	CEL (ENSOSIG00000005037) #24	CEL (ENSOSIG00000004894) #24	ENSOSIG00000004878	reep5 (ENSOSIG00000004869)	ENSOSIG00000004861	chd1 (ENSOSIG00000003712)	nfil3 (ENSOSIG00000017149)	ROR2 (ENSOSIG00000017136)	sptlc1 (ENSOSIG00000017134)	megf10 (ENSOSIG00000017093)
Japanese Medaka HdrR	MODERN SPECIES	3	PURG (ENSORLG00000028048)	slc38a9 (ENSORLG00000015448)	ENSORLG00000026349	ENSORLG00000026950	slc1a3b (ENSORLG00000014267)	spra (ENSORLG00000022199)	ENSORLG00000011200	ENSORLG00000023314	DQX1 (ENSORLG00000014277)	thnsl2 (ENSORLG00000024644)	TBC1D13 (ENSORLG00000020094)	zer1 (ENSORLG00000026786)	sh3glb2b (ENSORLG00000014325)	nadk2 (ENSORLG00000014360)	tsc1b (ENSORLG00000014383) #21	GFI1B (ENSORLG00000014390) #22	GTF3C5 (ENSORLG00000014414) #23	CEL (ENSORLG00000014439) #24	ENSORLG00000014464 #24	ENSORLG00000014470	ENSORLG00000023513	reep5 (ENSORLG00000014495)	syk (ENSORLG00000014520)	chd1 (ENSORLG00000014570)	auh (ENSORLG00000020225)	nfil3 (ENSORLG00000026491)	ROR2 (ENSORLG00000023945)	sptlc1 (ENSORLG00000014633)	megf10 (ENSORLG00000014709)	ENSORLG00000019564	ENSORLG00000014726
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.f #24	ENSGT00940000156231.o.a.g.e #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t.d	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.t.c	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.f #24	ENSGT00940000156231.o.a.g.e #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.a	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a
Poecilia	ANCESTRAL SPECIES	50	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t.d	ENSGT00390000000223.c	ENSGT01100000263624	ENSGT01030000234614.B.a.a.a.t.c	ENSGT00940000160428.b.b	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.f #24	ENSGT00940000156231.o.a.g.e #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.a	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a
NAME_6	ANCESTRAL SPECIES	259					ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t.d	ENSGT00390000000223.c	ENSGT00390000000223.d	ENSGT01030000234614.B.a.a.a.t.c	ENSGT00940000160428.b.b	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.f #24	ENSGT00940000156231.o.a.g.e #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C.a
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	3345															tsc1b (ENSPLAG00000021948) #21	GFI1B (ENSPLAG00000021960) #22
Sailfin molly	MODERN SPECIES	2269															ENSPLAG00000017160 #21	GFI1B (ENSPLAG00000017181) #22	GTF3C5 (ENSPLAG00000017187) #23	CEL (ENSPLAG00000017221) #24	CEL (ENSPLAG00000017237) #24	zgc:92275 (ENSPLAG00000017244)
Amazon molly	MODERN SPECIES	635					dpysl2b (ENSPFOG00000004470)	bnip3lb (ENSPFOG00000004444)	ppp2r2ab (ENSPFOG00000004359)	gsna (ENSPFOG00000004157)	stom (ENSPFOG00000004039)	stom (ENSPFOG00000003915)	ENSPFOG00000003876	GTF3C4 (ENSPFOG00000003773)	ENSPFOG00000020431	ENSPFOG00000022024	tsc1b (ENSPFOG00000003511) #21	GFI1B (ENSPFOG00000003460) #22	GTF3C5 (ENSPFOG00000023524) #23	CEL (ENSPFOG00000003257) #24	CEL (ENSPFOG00000002964) #24	zgc:92275 (ENSPFOG00000002870)	grin1a (ENSPFOG00000002357)	ENTPD2 (ENSPFOG00000002034)	phpt1 (ENSPFOG00000001949)	ENSPFOG00000001550
Guppy	MODERN SPECIES	442	ENSPREG00000022138	ENSPREG00000022120	ENSPREG00000022103	ENSPREG00000022096	dpysl2b (ENSPREG00000021949)	bnip3lb (ENSPREG00000021832)	ppp2r2ab (ENSPREG00000021820)	GSN (ENSPREG00000021803)	stom (ENSPREG00000021794)	ENSPREG00000021789	ENSPREG00000021785	stom (ENSPREG00000021776)	ENSPREG00000021764	GTF3C4 (ENSPREG00000021756)	tsc1b (ENSPREG00000021733) #21	GFI1B (ENSPREG00000021718) #22	GTF3C5 (ENSPREG00000021691) #23	cel.1 (ENSPREG00000021662) #24	grin1a (ENSPREG00000021413)	ENSPREG00000021319	ENSPREG00000021306	ENSPREG00000021299	glulc (ENSPREG00000021290)	ARRDC1 (ENSPREG00000021262)	slc31a2 (ENSPREG00000021244)	niban2a (ENSPREG00000021197)	stxbp1a (ENSPREG00000021119)	WHRN (ENSPREG00000021084)	MAN1B1 (ENSPREG00000021040)	ENSPREG00000021001	CACNA1B (ENSPREG00000020570)
Platyfish	MODERN SPECIES	22	LRRTM4 (ENSXMAG00000001797)	ENSXMAG00000028682	ENSXMAG00000029212	ENSXMAG00000001811	dpysl2b (ENSXMAG00000001812)	bnip3lb (ENSXMAG00000024540)	ppp2r2ab (ENSXMAG00000001828)	gsna (ENSXMAG00000001843)	ENSXMAG00000029799	ENSXMAG00000001875	ENSXMAG00000024958	stom (ENSXMAG00000001882)	ENSXMAG00000021441	GTF3C4 (ENSXMAG00000001895)	tsc1b (ENSXMAG00000027320) #21	GFI1B (ENSXMAG00000027589) #22	GTF3C5 (ENSXMAG00000013967) #23	CEL (ENSXMAG00000013978) #24	CEL (ENSXMAG00000013981) #24	zgc:92275 (ENSXMAG00000014018)	grin1a (ENSXMAG00000003092)	ENTPD2 (ENSXMAG00000003065)	phpt1 (ENSXMAG00000003061)	ENSXMAG00000028335	ENSXMAG00000021977	ENSXMAG00000022038	ENSXMAG00000027844	ENSXMAG00000022634	ENSXMAG00000027526	ENSXMAG00000026986	ENSXMAG00000003055
NAME_4	ANCESTRAL SPECIES	52	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.f #24	ENSGT00940000156231.o.a.g.e #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Mummichog	MODERN SPECIES	2210	wdr5 (ENSFHEG00000014661)	rxraa (ENSFHEG00000014693)	ENSFHEG00000014753	tmem230a (ENSFHEG00000014782)	ENSFHEG00000000356	ENSFHEG00000014824	dpysl2b (ENSFHEG00000014842)	bnip3lb (ENSFHEG00000014853)	ppp2r2ab (ENSFHEG00000014880)	gsna (ENSFHEG00000015027)	ENSFHEG00000015047	stom (ENSFHEG00000015090)	ENSFHEG00000015108	GTF3C4 (ENSFHEG00000015112)	tsc1b (ENSFHEG00000015130) #21	GFI1B (ENSFHEG00000015138) #22	GTF3C5 (ENSFHEG00000015176) #23	CEL (ENSFHEG00000015219) #24	CEL (ENSFHEG00000015247) #24	zgc:92275 (ENSFHEG00000015275)	grin1a (ENSFHEG00000015346)	ENTPD2 (ENSFHEG00000015454)	phpt1 (ENSFHEG00000015537)	ENSFHEG00000015694	ENSFHEG00000015701	ARRDC1 (ENSFHEG00000015706)	slc31a2 (ENSFHEG00000015723)	niban2a (ENSFHEG00000015736)	stxbp1a (ENSFHEG00000015839)	ENSFHEG00000015864	WHRN (ENSFHEG00000015928)
Sheepshead minnow	MODERN SPECIES	144	ENSCVAG00000000424	LRRTM4 (ENSCVAG00000016731)	ENSCVAG00000016743	ENSCVAG00000016754	tmem230a (ENSCVAG00000016772)	ENSCVAG00000016793	dpysl2b (ENSCVAG00000016916)	bnip3lb (ENSCVAG00000016959)	ppp2r2ab (ENSCVAG00000016969)	gsna (ENSCVAG00000017032)	ENSCVAG00000017047	stom (ENSCVAG00000017095)	barhl1a (ENSCVAG00000017112)	GTF3C4 (ENSCVAG00000017121)	tsc1b (ENSCVAG00000017146) #21	GFI1B (ENSCVAG00000017168) #22	GTF3C5 (ENSCVAG00000017178) #23	CEL (ENSCVAG00000017213) #24	CEL (ENSCVAG00000017221) #24	CEL (ENSCVAG00000017275) #24	zgc:92275 (ENSCVAG00000017305)	grin1a (ENSCVAG00000017539)
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.b.b	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Mangrove rivulus	MODERN SPECIES	84	stxbp1a (ENSKMAG00000014802)	niban2a (ENSKMAG00000014949)	slc31a2 (ENSKMAG00000015043)	ARRDC1 (ENSKMAG00000015065)	glulc (ENSKMAG00000015078)	ENSKMAG00000015109	phpt1 (ENSKMAG00000015148)	ENTPD2 (ENSKMAG00000015168)	grin1a (ENSKMAG00000015344)	zgc:92275 (ENSKMAG00000015819)	gsna (ENSKMAG00000015866)	stom (ENSKMAG00000015936)	barhl1a (ENSKMAG00000015972)	GTF3C4 (ENSKMAG00000015992)	ENSKMAG00000016012 #21	GFI1B (ENSKMAG00000016047) #22	GTF3C5 (ENSKMAG00000016060) #23	cel.1 (ENSKMAG00000016074) #24	ppp2r2ab (ENSKMAG00000016101)	bnip3lb (ENSKMAG00000016127)	dpysl2b (ENSKMAG00000016154)	ENSKMAG00000016231	tmem230a (ENSKMAG00000016245)	ENSKMAG00000016262	LRRTM4 (ENSKMAG00000016302)	ENSKMAG00000016318	ENSKMAG00000016353	VAV2 (ENSKMAG00000016451)	ENSKMAG00000016654	wdr5 (ENSKMAG00000016691)	rxraa (ENSKMAG00000016751)
Turquoise killifish	MODERN SPECIES	1021																ENSNFUG00015013532 #22
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000178491	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Pomacentridae	ANCESTRAL SPECIES	44	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.n.a.a #24	ENSGT00940000156231.o.a.g.n.b #24	ENSGT00940000156231.o.a.g.n.a.b #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a
Pomacentridae_A	ANCESTRAL SPECIES	62	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.n.a.a #24	ENSGT00940000156231.o.a.g.n.b #24	ENSGT00940000156231.o.a.g.m.a.a #24	ENSGT00940000156231.o.a.g.n.a.b #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a
Amphiprion	ANCESTRAL SPECIES	129	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.n.a.a #24	ENSGT00940000156231.o.a.g.m.b #24	ENSGT00940000156231.o.a.g.n.b #24	ENSGT00940000156231.o.a.g.m.a.a #24	ENSGT00940000156231.o.a.g.n.a.b #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a
Orange clownfish	MODERN SPECIES	7	VAV2 (ENSAPEG00000015542)	ENSAPEG00000015624	ENSAPEG00000015677	LRRTM4 (ENSAPEG00000015718)	ENSAPEG00000015762	tmem230a (ENSAPEG00000015852)	ENSAPEG00000015879	dpysl2b (ENSAPEG00000015900)	bnip3lb (ENSAPEG00000015941)	ppp2r2ab (ENSAPEG00000015992)	gsna (ENSAPEG00000016057)	stom (ENSAPEG00000016134)	ENSAPEG00000016165	GTF3C4 (ENSAPEG00000016178)	tsc1b (ENSAPEG00000016185) #21	GFI1B (ENSAPEG00000016196) #22	GTF3C5 (ENSAPEG00000016239) #23	CEL (ENSAPEG00000016259) #24	CEL (ENSAPEG00000016325) #24	CEL (ENSAPEG00000016525) #24	CEL (ENSAPEG00000016553) #24	CEL (ENSAPEG00000016793) #24	zgc:92275 (ENSAPEG00000017216)	grin1a (ENSAPEG00000017258)	ENTPD2 (ENSAPEG00000017370)	phpt1 (ENSAPEG00000017474)	ENSAPEG00000017500	ENSAPEG00000017622	ARRDC1 (ENSAPEG00000017646)	slc31a2 (ENSAPEG00000017668)	niban2a (ENSAPEG00000017683)
Clown anemonefish	MODERN SPECIES	789															tsc1b (ENSAOCG00000021204) #21	GFI1B (ENSAOCG00000021187) #22
Spiny chromis	MODERN SPECIES	2640																GFI1B (ENSAPOG00000001296) #22	GTF3C5 (ENSAPOG00000001300) #23	CEL (ENSAPOG00000001308) #24
Bicolor damselfish	MODERN SPECIES	790								dpysl2b (ENSSPAG00000023006)	bnip3lb (ENSSPAG00000022999)	ppp2r2ab (ENSSPAG00000022968)	gsna (ENSSPAG00000022950)	stom (ENSSPAG00000022939)	ENSSPAG00000022934	GTF3C4 (ENSSPAG00000022930)	tsc1b (ENSSPAG00000022920) #21	GFI1B (ENSSPAG00000022914) #22	GTF3C5 (ENSSPAG00000022908) #23	CEL (ENSSPAG00000022862) #24	CEL (ENSSPAG00000022773) #24	ENSSPAG00000022759 #24
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000178491	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Midas cichlid	MODERN SPECIES	688	ENSACIG00000001631	LRRTM4 (ENSACIG00000001696)	ENSACIG00000001703	tmem230a (ENSACIG00000001747)	ENSACIG00000001757	dpysl2b (ENSACIG00000001763)	bnip3lb (ENSACIG00000001797)	ppp2r2ab (ENSACIG00000001814)	ENSACIG00000001839	gsna (ENSACIG00000001851)	stom (ENSACIG00000001895)	ENSACIG00000001993	GTF3C4 (ENSACIG00000002002)	tsc1b (ENSACIG00000002057) #21	ENSACIG00000002180	GFI1B (ENSACIG00000002190) #22	GTF3C5 (ENSACIG00000002202) #23	CEL (ENSACIG00000002226) #24
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.j #24	ENSGT00940000156231.o.a.g.i #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a
Nile tilapia	MODERN SPECIES	19	ENSONIG00000013058	LRRTM4 (ENSONIG00000013057)	ENSONIG00000035858	ENSONIG00000041090	ENSONIG00000013054	tmem230a (ENSONIG00000013053)	ENSONIG00000041112	dpysl2b (ENSONIG00000013043)	bnip3lb (ENSONIG00000013042)	ENSONIG00000038420	gsna (ENSONIG00000013026)	stom (ENSONIG00000013021)	ENSONIG00000013020	GTF3C4 (ENSONIG00000013016)	tsc1b (ENSONIG00000013012) #21	GFI1B (ENSONIG00000013011) #22	GTF3C5 (ENSONIG00000013009) #23	CEL (ENSONIG00000040887) #24	CEL (ENSONIG00000034500) #24	CEL (ENSONIG00000029143) #24	CEL (ENSONIG00000039449) #24	zgc:92275 (ENSONIG00000012998)	grin1a (ENSONIG00000012985)	ENSONIG00000031289	ENTPD2 (ENSONIG00000012980)	phpt1 (ENSONIG00000012979)	ENSONIG00000012978	glulc (ENSONIG00000012974)	ARRDC1 (ENSONIG00000012971)	slc31a2 (ENSONIG00000012969)	niban2a (ENSONIG00000012956)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.j #24	ENSGT00940000156231.o.a.g.i #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.j #24	ENSGT00940000156231.o.a.g.i #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Burton s mouthbrooder	MODERN SPECIES	581					ENSHBUG00000005023	tmem230a (ENSHBUG00000005039)	ENSHBUG00000005044	dpysl2b (ENSHBUG00000005125)	bnip3lb (ENSHBUG00000005165)	ppp2r2ab (ENSHBUG00000005208)	gsna (ENSHBUG00000005286)	stom (ENSHBUG00000005302)	ENSHBUG00000005316	GTF3C4 (ENSHBUG00000005333)	tsc1b (ENSHBUG00000005436) #21	GFI1B (ENSHBUG00000005451) #22	GTF3C5 (ENSHBUG00000005463) #23	CEL (ENSHBUG00000005475) #24	CEL (ENSHBUG00000005486) #24	zgc:92275 (ENSHBUG00000005513)	grin1a (ENSHBUG00000005579)	ENTPD2 (ENSHBUG00000005611)	phpt1 (ENSHBUG00000005623)	ENSHBUG00000005705
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00940000182013	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.j #24	ENSGT00940000156231.o.a.g.i #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
P. nyererei	MODERN SPECIES	311	ENSPNYG00000018973	ENSPNYG00000018941	LRRTM4 (ENSPNYG00000018931)	ENSPNYG00000018909	tmem230a (ENSPNYG00000018889)	ENSPNYG00000018869	dpysl2b (ENSPNYG00000018826)	bnip3lb (ENSPNYG00000018813)	ppp2r2ab (ENSPNYG00000018783)	gsna (ENSPNYG00000018713)	ENSPNYG00000018684	stom (ENSPNYG00000018661)	ENSPNYG00000018644	GTF3C4 (ENSPNYG00000018577)	tsc1b (ENSPNYG00000018452) #21	GFI1B (ENSPNYG00000018422) #22	GTF3C5 (ENSPNYG00000018261) #23	CEL (ENSPNYG00000018200) #24	CEL (ENSPNYG00000018185) #24	zgc:92275 (ENSPNYG00000018162)	grin1a (ENSPNYG00000018102)	ENTPD2 (ENSPNYG00000018068)	phpt1 (ENSPNYG00000018052)	ENSPNYG00000017978	glulc (ENSPNYG00000017955)	ARRDC1 (ENSPNYG00000017947)	slc31a2 (ENSPNYG00000017937)	niban2a (ENSPNYG00000017836)	stxbp1a (ENSPNYG00000017761)	WHRN (ENSPNYG00000017723)	MAN1B1 (ENSPNYG00000017706)
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT00940000182013	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.j #24	ENSGT00940000156231.o.a.g.i #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Eastern happy	MODERN SPECIES	19	ENSACLG00000026847	ENSACLG00000026850	ENSACLG00000026864	tmem230a (ENSACLG00000026867)	ENSACLG00000026876	dpysl2b (ENSACLG00000026885)	ENSACLG00000026914	bnip3lb (ENSACLG00000026931)	ppp2r2ab (ENSACLG00000026937)	gsna (ENSACLG00000026953)	stom (ENSACLG00000026990)	ENSACLG00000027010	GTF3C4 (ENSACLG00000027017)	tsc1b (ENSACLG00000027023) #21	ENSACLG00000027038	GFI1B (ENSACLG00000027053) #22	GTF3C5 (ENSACLG00000027055) #23	CEL (ENSACLG00000027058) #24	CEL (ENSACLG00000027073) #24	zgc:92275 (ENSACLG00000027091)	grin1a (ENSACLG00000027108)	ENTPD2 (ENSACLG00000027206)	phpt1 (ENSACLG00000027264)	ENSACLG00000027230	ENSACLG00000027270	ARRDC1 (ENSACLG00000027289)	slc31a2 (ENSACLG00000027306)	niban2a (ENSACLG00000027311)	stxbp1a (ENSACLG00000027321)	ENSACLG00000027333	WHRN (ENSACLG00000027365)
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005015856	LRRTM4 (ENSMZEG00005015852)	ENSMZEG00005015844	ENSMZEG00005015839	tmem230a (ENSMZEG00005015823)	ENSMZEG00005015820	dpysl2b (ENSMZEG00005015802)	bnip3lb (ENSMZEG00005015790)	ppp2r2ab (ENSMZEG00005015765)	gsna (ENSMZEG00005015714)	ENSMZEG00005015696	stom (ENSMZEG00005015686)	ENSMZEG00005015676	GTF3C4 (ENSMZEG00005015629)	tsc1b (ENSMZEG00005015601) #21	GFI1B (ENSMZEG00005015594) #22	ENSMZEG00005015590	GTF3C5 (ENSMZEG00005015577) #23	CEL (ENSMZEG00005015563) #24	CEL (ENSMZEG00005015549) #24	zgc:92275 (ENSMZEG00005015538)	grin1a (ENSMZEG00005015459)	ENTPD2 (ENSMZEG00005015421)	phpt1 (ENSMZEG00005015205)	ENSMZEG00005015178	glulc (ENSMZEG00005015168)	ENSMZEG00005015165	ARRDC1 (ENSMZEG00005015159)	slc31a2 (ENSMZEG00005015148)	niban2a (ENSMZEG00005015138)	stxbp1a (ENSMZEG00005015117)
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	328	VAV2 (ENSNBRG00000011832)	ENSNBRG00000011893	ENSNBRG00000011920	LRRTM4 (ENSNBRG00000011947)	ENSNBRG00000011956	tmem230a (ENSNBRG00000012013)	ENSNBRG00000012027	dpysl2b (ENSNBRG00000012041)	bnip3lb (ENSNBRG00000012074)	ppp2r2ab (ENSNBRG00000012091)	gsna (ENSNBRG00000012121)	stom (ENSNBRG00000012165)	barhl1a (ENSNBRG00000012181)	GTF3C4 (ENSNBRG00000012195)	tsc1b (ENSNBRG00000012250) #21	GFI1B (ENSNBRG00000012376) #22	GFI1B (ENSNBRG00000012391) #22	GTF3C5 (ENSNBRG00000012421) #23	cel.1 (ENSNBRG00000012495) #24
Lyretail cichlid	MODERN SPECIES	328	ENSNBRG00000011893	ENSNBRG00000011920	LRRTM4 (ENSNBRG00000011947)	ENSNBRG00000011956	tmem230a (ENSNBRG00000012013)	ENSNBRG00000012027	dpysl2b (ENSNBRG00000012041)	bnip3lb (ENSNBRG00000012074)	ppp2r2ab (ENSNBRG00000012091)	gsna (ENSNBRG00000012121)	stom (ENSNBRG00000012165)	barhl1a (ENSNBRG00000012181)	GTF3C4 (ENSNBRG00000012195)	tsc1b (ENSNBRG00000012250) #21	GFI1B (ENSNBRG00000012376) #22	GFI1B (ENSNBRG00000012391) #22	GTF3C5 (ENSNBRG00000012421) #23	cel.1 (ENSNBRG00000012495) #24
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000161712	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.b.b	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00390000010047.h	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Fugu	MODERN SPECIES	18	ENSTRUG00000004820	LRRTM4 (ENSTRUG00000004682)	ENSTRUG00000033002	ENSTRUG00000004576	tmem230a (ENSTRUG00000020570)	ENSTRUG00000004310	dpysl2b (ENSTRUG00000002983)	bnip3lb (ENSTRUG00000007174)	ppp2r2ab (ENSTRUG00000029005)	gsna (ENSTRUG00000005918)	ENSTRUG00000031051	stom (ENSTRUG00000032337)	ENSTRUG00000005590	GTF3C4 (ENSTRUG00000005482)	tsc1b (ENSTRUG00000004623) #21	GFI1B (ENSTRUG00000004525) #22	GTF3C5 (ENSTRUG00000001527) #23	cel.1 (ENSTRUG00000019661) #24	ENSTRUG00000030105	zgc:92275 (ENSTRUG00000002257)	grin1a (ENSTRUG00000004131)	ENTPD2 (ENSTRUG00000003650)	phpt1 (ENSTRUG00000024720)	ENSTRUG00000003215	ENSTRUG00000001238	ARRDC1 (ENSTRUG00000000342)	slc31a2 (ENSTRUG00000000331)	niban2a (ENSTRUG00000000286)	stxbp1a (ENSTRUG00000000216)	ENSTRUG00000026954	WHRN (ENSTRUG00000000212)
Tetraodon	MODERN SPECIES	19	wdr5 (ENSTNIG00000003824)	ENSTNIG00000003823	VAV2 (ENSTNIG00000017823)	LRRTM4 (ENSTNIG00000017822)	ENSTNIG00000017821	tmem230a (ENSTNIG00000000205)	ENSTNIG00000017820	dpysl2b (ENSTNIG00000004206)	bnip3lb (ENSTNIG00000005254)	ppp2r2ab (ENSTNIG00000005253)	gsna (ENSTNIG00000005252)	stom (ENSTNIG00000005251)	ENSTNIG00000005415	GTF3C4 (ENSTNIG00000005414)	tsc1b (ENSTNIG00000003835) #21	GFI1B (ENSTNIG00000003834) #22	GTF3C5 (ENSTNIG00000005630) #23	CEL (ENSTNIG00000005631) #24	CEL (ENSTNIG00000003390) #24	zgc:92275 (ENSTNIG00000003389)	grin1a (ENSTNIG00000004002)	ENSTNIG00000004003	ENSTNIG00000001527	ARRDC1 (ENSTNIG00000003424)	slc31a2 (ENSTNIG00000003423)	slc31a2 (ENSTNIG00000004522)	niban2a (ENSTNIG00000004523)	stxbp1a (ENSTNIG00000019776)	WHRN (ENSTNIG00000004436)	MAN1B1 (ENSTNIG00000005227)	ENSTNIG00000003829
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Ballan wrasse	MODERN SPECIES	84															tsc1b (ENSLBEG00000020330) #21	GFI1B (ENSLBEG00000020297) #22	GTF3C5 (ENSLBEG00000020264) #23	ENSLBEG00000020242	CEL (ENSLBEG00000020150) #24	CEL (ENSLBEG00000020052) #24	zgc:92275 (ENSLBEG00000020012)	grin1a (ENSLBEG00000019856)	ENTPD2 (ENSLBEG00000019803)	phpt1 (ENSLBEG00000019790)	ENSLBEG00000019608	ENSLBEG00000019548	ARRDC1 (ENSLBEG00000019524)	slc31a2 (ENSLBEG00000019507)	niban2a (ENSLBEG00000019486)	stxbp1a (ENSLBEG00000019429)	ENSLBEG00000019370
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00940000159718	ENSGT00940000161712	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Lumpfish	MODERN SPECIES	3	ENSCLMG00005009448	VAV2 (ENSCLMG00005009428)	vsig8a (ENSCLMG00005009424)	ENSCLMG00005009423	ENSCLMG00005009417	tmem230a (ENSCLMG00005009415)	ENSCLMG00005009414	dpysl2b (ENSCLMG00005004703)	bnip3lb (ENSCLMG00005004298)	ppp2r2ab (ENSCLMG00005019630)	gsna (ENSCLMG00005017717)	stom (ENSCLMG00005017684)	ENSCLMG00005017681	GTF3C4 (ENSCLMG00005017679)	tsc1b (ENSCLMG00005017678) #21	GFI1B (ENSCLMG00005017676) #22	GTF3C5 (ENSCLMG00005017674) #23	CEL (ENSCLMG00005017673) #24	CEL (ENSCLMG00005017671) #24	CEL (ENSCLMG00005017670) #24	zgc:92275 (ENSCLMG00005017668)	grin1a (ENSCLMG00005017251)	ENTPD2 (ENSCLMG00005017238)	phpt1 (ENSCLMG00005017237)	ENSCLMG00005017234	glulc (ENSCLMG00005017233)	ARRDC1 (ENSCLMG00005017231)	slc31a2 (ENSCLMG00005017230)	niban2a (ENSCLMG00005015879)	stxbp1a (ENSCLMG00005015823)	ENSCLMG00005015820
Stickleback	MODERN SPECIES	13	ENSGACG00000018180	VAV2 (ENSGACG00000018179)	ENSGACG00000018177	ENSGACG00000018176	ENSGACG00000018174	tmem230a (ENSGACG00000018173)	ENSGACG00000018172	dpysl2b (ENSGACG00000018166)	bnip3lb (ENSGACG00000018162)	ppp2r2ab (ENSGACG00000018156)	gsna (ENSGACG00000018150)	stom (ENSGACG00000018146)	ENSGACG00000018145	GTF3C4 (ENSGACG00000018142)	tsc1b (ENSGACG00000018136) #21	GFI1B (ENSGACG00000018134) #22	GTF3C5 (ENSGACG00000018132) #23	CEL (ENSGACG00000018130) #24	CEL (ENSGACG00000018127) #24	zgc:92275 (ENSGACG00000018125)	grin1a (ENSGACG00000018121)	ENTPD2 (ENSGACG00000018118)	phpt1 (ENSGACG00000018117)	ENSGACG00000018113	glulc (ENSGACG00000018106)	ARRDC1 (ENSGACG00000018100)	ENSGACG00000018099	slc31a2 (ENSGACG00000018095)	niban2a (ENSGACG00000018094)	stxbp1a (ENSGACG00000018087)	ENSGACG00000018084
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Pike perch	MODERN SPECIES	47	ENSSLUG00000006854	ENSSLUG00000006862	LRRTM4 (ENSSLUG00000006867)	ENSSLUG00000006878	ENSSLUG00000006916	tmem230a (ENSSLUG00000006929)	ENSSLUG00000006938	dpysl2b (ENSSLUG00000007031)	bnip3lb (ENSSLUG00000007393)	ppp2r2ab (ENSSLUG00000007463)	gsna (ENSSLUG00000009038)	stom (ENSSLUG00000013958)	ENSSLUG00000014218	GTF3C4 (ENSSLUG00000014220)	tsc1b (ENSSLUG00000014224) #21	GFI1B (ENSSLUG00000014237) #22	GTF3C5 (ENSSLUG00000014241) #23	CEL (ENSSLUG00000014269) #24	CEL (ENSSLUG00000014353) #24	zgc:92275 (ENSSLUG00000014369)	grin1a (ENSSLUG00000014397)	ENTPD2 (ENSSLUG00000014586)	phpt1 (ENSSLUG00000014600)	ENSSLUG00000014609	glulc (ENSSLUG00000014623)	ARRDC1 (ENSSLUG00000014630)	slc31a2 (ENSSLUG00000014650)	niban2a (ENSSLUG00000014718)	stxbp1a (ENSSLUG00000016511)	ENSSLUG00000017889	ENSSLUG00000017899
Channel bull blenny	MODERN SPECIES	3	ENSCGOG00000023852	ENSCGOG00000023848	ENSCGOG00000023844	LRRTM4 (ENSCGOG00000023842)	ENSCGOG00000023841	tmem230a (ENSCGOG00000023839)	ENSCGOG00000023837	dpysl2b (ENSCGOG00000023650)	bnip3lb (ENSCGOG00000023636)	ppp2r2ab (ENSCGOG00000023502)	gsna (ENSCGOG00000023403)	stom (ENSCGOG00000023390)	barhl1a (ENSCGOG00000023386)	GTF3C4 (ENSCGOG00000023385)	tsc1b (ENSCGOG00000023336) #21	GFI1B (ENSCGOG00000023320) #22	GTF3C5 (ENSCGOG00000023312) #23	CEL (ENSCGOG00000023308) #24	CEL (ENSCGOG00000023292) #24	zgc:92275 (ENSCGOG00000023285)	grin1a (ENSCGOG00000022538)	ENTPD2 (ENSCGOG00000022472)	phpt1 (ENSCGOG00000022470)	ENSCGOG00000022468	ENSCGOG00000022465	glulc (ENSCGOG00000022461)	ENSCGOG00000022459	ENSCGOG00000022445	ENSCGOG00000022442	ARRDC1 (ENSCGOG00000022441)	slc31a2 (ENSCGOG00000022440)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652.h	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.s.a	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652.h	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
European seabass	MODERN SPECIES	9	ENSDLAG00005005174	ENSDLAG00005008462	ENSDLAG00005008479	ENSDLAG00005008508	ENSDLAG00005008521	tmem230a (ENSDLAG00005008590)	ENSDLAG00005008603	dpysl2b (ENSDLAG00005008652)	bnip3lb (ENSDLAG00005009578)	ppp2r2ab (ENSDLAG00005009601)	gsna (ENSDLAG00005009834)	stom (ENSDLAG00005026953)	ENSDLAG00005030063	GTF3C4 (ENSDLAG00005029334)	tsc1b (ENSDLAG00005010639) #21	GFI1B (ENSDLAG00005010758) #22	GTF3C5 (ENSDLAG00005010780) #23	cel.1 (ENSDLAG00005010808) #24	zgc:92275 (ENSDLAG00005028128)	grin1a (ENSDLAG00005034507)	ENSDLAG00005011521	ENSDLAG00005011590	ENSDLAG00005011613	ENSDLAG00005011635	slc31a2 (ENSDLAG00005028804)	niban2a (ENSDLAG00005011685)	stxbp1a (ENSDLAG00005012612)	ENSDLAG00005015709	ENSDLAG00005015746	ENSDLAG00005015776	ENSDLAG00005034974
Large yellow croaker	MODERN SPECIES	3	VAV2 (ENSLCRG00005008176)	ENSLCRG00005013286	ENSLCRG00005013287	LRRTM4 (ENSLCRG00005013290)	ENSLCRG00005013292	tmem230a (ENSLCRG00005013294)	ENSLCRG00005013296	dpysl2b (ENSLCRG00005013358)	bnip3lb (ENSLCRG00005017140)	ppp2r2ab (ENSLCRG00005017154)	gsna (ENSLCRG00005018176)	stom (ENSLCRG00005018306)	ENSLCRG00005018395	GTF3C4 (ENSLCRG00005018396)	tsc1b (ENSLCRG00005018404) #21	GFI1B (ENSLCRG00005018420) #22	GTF3C5 (ENSLCRG00005018423) #23	CEL (ENSLCRG00005018429) #24	CEL (ENSLCRG00005018511) #24	CEL (ENSLCRG00005018514) #24	zgc:92275 (ENSLCRG00005018533)	grin1a (ENSLCRG00005018540)	ENTPD2 (ENSLCRG00005018585)	phpt1 (ENSLCRG00005018587)	ENSLCRG00005018588	ENSLCRG00005018592	ARRDC1 (ENSLCRG00005018595)	ENSLCRG00005018598	slc31a2 (ENSLCRG00005018599)	niban2a (ENSLCRG00005018604)	stxbp1a (ENSLCRG00005018657)
Gilthead seabream	MODERN SPECIES	3	VAV2 (ENSSAUG00010008483)	ENSSAUG00010008471	ENSSAUG00010008469	LRRTM4 (ENSSAUG00010008466)	ENSSAUG00010008453	tmem230a (ENSSAUG00010008448)	ENSSAUG00010027432	dpysl2b (ENSSAUG00010027194)	bnip3lb (ENSSAUG00010027162)	ppp2r2ab (ENSSAUG00010027110)	gsna (ENSSAUG00010026794)	stom (ENSSAUG00010026764)	ENSSAUG00010026762	GTF3C4 (ENSSAUG00010026757)	tsc1b (ENSSAUG00010026752) #21	GFI1B (ENSSAUG00010026746) #22	GTF3C5 (ENSSAUG00010026744) #23	zgc:92275 (ENSSAUG00010026740)	cel.1 (ENSSAUG00010026724) #24	grin1a (ENSSAUG00010026617)	ENTPD2 (ENSSAUG00010026606)	phpt1 (ENSSAUG00010026604)	ENSSAUG00010026602	glulc (ENSSAUG00010026599)	ARRDC1 (ENSSAUG00010026597)	slc31a2 (ENSSAUG00010026595)	niban2a (ENSSAUG00010026520)	stxbp1a (ENSSAUG00010026509)	ENSSAUG00010026505	WHRN (ENSSAUG00010026502)	MAN1B1 (ENSSAUG00010026499)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000153385.a	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Turbot	MODERN SPECIES	7	ENSSMAG00000015631	ENSSMAG00000015621	ENSSMAG00000015618	ENSSMAG00000031238	ENSSMAG00000015581	tmem230a (ENSSMAG00000015552)	ENSSMAG00000015543	dpysl2b (ENSSMAG00000015479)	bnip3lb (ENSSMAG00000031819)	ppp2r2ab (ENSSMAG00000015406)	gsna (ENSSMAG00000015309)	stom (ENSSMAG00000015278)	barhl1b (ENSSMAG00000015268)	GTF3C4 (ENSSMAG00000015257)	tsc1b (ENSSMAG00000015227) #21	GFI1B (ENSSMAG00000015181) #22	GTF3C5 (ENSSMAG00000015172) #23	CEL (ENSSMAG00000015128) #24	CEL (ENSSMAG00000015110) #24	ENSSMAG00000015091	grin1a (ENSSMAG00000014880)	ENSSMAG00000014857	ENSSMAG00000026906	ENSSMAG00000014816	ENSSMAG00000014768	ENSSMAG00000014745	slc31a2 (ENSSMAG00000014742)	niban2a (ENSSMAG00000014697)	stxbp1a (ENSSMAG00000014649)	ENSSMAG00000014572	ENSSMAG00000014543
Tongue sole	MODERN SPECIES	5	DGKZ (ENSCSEG00000001180)	LRRTM4 (ENSCSEG00000001196)	ENSCSEG00000001209	tmem230a (ENSCSEG00000001217)	ENSCSEG00000001221	dpysl2b (ENSCSEG00000001228)	bnip3lb (ENSCSEG00000001249)	ppp2r2ab (ENSCSEG00000001252)	gsna (ENSCSEG00000001258)	stom (ENSCSEG00000001276)	ENSCSEG00000001278	ENSCSEG00000001280	ENSCSEG00000001283	GTF3C4 (ENSCSEG00000001289)	tsc1b (ENSCSEG00000001295) #21	GFI1B (ENSCSEG00000001315) #22	GTF3C5 (ENSCSEG00000001321) #23	CEL (ENSCSEG00000001333) #24	CEL (ENSCSEG00000001398) #24	zgc:92275 (ENSCSEG00000001401)	grin1a (ENSCSEG00000001410)	ENTPD2 (ENSCSEG00000001461)	c7b (ENSCSEG00000001468)	c6 (ENSCSEG00000001473)	rgs7bpb (ENSCSEG00000001488)	ENSCSEG00000001509	ENSCSEG00000001513	spp1 (ENSCSEG00000001516)	ENSCSEG00000001522	vldlr (ENSCSEG00000001532)	KCNV2 (ENSCSEG00000001561)
Carangaria_A	ANCESTRAL SPECIES	34	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b
Seriola	ANCESTRAL SPECIES	33			ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g.p #24	ENSGT00940000156231.o.a.g.o #24	ENSGT00940000156231.o.a.h #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a
Yellowtail amberjack	MODERN SPECIES	2245								dpysl2b (ENSSLDG00000013496)	bnip3lb (ENSSLDG00000013564)	ppp2r2ab (ENSSLDG00000013593)	gsna (ENSSLDG00000013630)	stom (ENSSLDG00000013689)	ENSSLDG00000013710	GTF3C4 (ENSSLDG00000013735)	tsc1b (ENSSLDG00000013786) #21	GFI1B (ENSSLDG00000013823) #22	GTF3C5 (ENSSLDG00000013852) #23	CEL (ENSSLDG00000013880) #24	CEL (ENSSLDG00000013898) #24	CEL (ENSSLDG00000013926) #24	zgc:92275 (ENSSLDG00000013943)	grin1a (ENSSLDG00000013971)	ENTPD2 (ENSSLDG00000014044)	phpt1 (ENSSLDG00000014070)	ENSSLDG00000014090	glulc (ENSSLDG00000014134)	ARRDC1 (ENSSLDG00000014168)	slc31a2 (ENSSLDG00000014188)	niban2a (ENSSLDG00000014235)	stxbp1a (ENSSLDG00000014392)	WHRN (ENSSLDG00000014467)
Greater amberjack	MODERN SPECIES	237		ENSSDUG00000011928	LRRTM4 (ENSSDUG00000011919)	ENSSDUG00000011910	ENSSDUG00000011873	tmem230a (ENSSDUG00000011853)	ENSSDUG00000011846	dpysl2b (ENSSDUG00000011785)	bnip3lb (ENSSDUG00000011774)	ppp2r2ab (ENSSDUG00000011749)	gsna (ENSSDUG00000011700)	stom (ENSSDUG00000011671)	ENSSDUG00000011653	GTF3C4 (ENSSDUG00000011639)	tsc1b (ENSSDUG00000011618) #21	GFI1B (ENSSDUG00000011604) #22	GTF3C5 (ENSSDUG00000011581) #23	CEL (ENSSDUG00000010989) #24	CEL (ENSSDUG00000010919) #24	CEL (ENSSDUG00000010550) #24	zgc:92275 (ENSSDUG00000010487)	grin1a (ENSSDUG00000010434)	ENTPD2 (ENSSDUG00000010381)	phpt1 (ENSSDUG00000010375)	ENSSDUG00000010316	glulc (ENSSDUG00000010300)	ARRDC1 (ENSSDUG00000010288)	slc31a2 (ENSSDUG00000010266)	niban2a (ENSSDUG00000010125)	stxbp1a (ENSSDUG00000010081)
Barramundi perch	MODERN SPECIES	379									bnip3lb (ENSLCAG00010022442)	ppp2r2ab (ENSLCAG00010022447)	gsna (ENSLCAG00010022485)	stom (ENSLCAG00010022563)	ENSLCAG00010022595	GTF3C4 (ENSLCAG00010022598)	tsc1b (ENSLCAG00010022610) #21	GFI1B (ENSLCAG00010022624) #22	GTF3C5 (ENSLCAG00010022628) #23	CEL (ENSLCAG00010022634) #24	CEL (ENSLCAG00010022640) #24	zgc:92275 (ENSLCAG00010022643)	grin1a (ENSLCAG00010022690)	ENTPD2 (ENSLCAG00010022840)	phpt1 (ENSLCAG00010022845)	ENSLCAG00010022853	glulc (ENSLCAG00010022863)	ARRDC1 (ENSLCAG00010022867)	slc31a2 (ENSLCAG00010022868)	niban2a (ENSLCAG00010022878)	stxbp1a (ENSLCAG00010022909)
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000003555	ENSMAMG00000003533	ENSMAMG00000003524	ENSMAMG00000003459	tmem230a (ENSMAMG00000003441)	ENSMAMG00000003428	dpysl2b (ENSMAMG00000024822)	bnip3lb (ENSMAMG00000003383)	ppp2r2ab (ENSMAMG00000003362)	gsna (ENSMAMG00000003249)	ENSMAMG00000003227	stom (ENSMAMG00000026446)	ENSMAMG00000003185	GTF3C4 (ENSMAMG00000003160)	tsc1b (ENSMAMG00000003117) #21	GFI1B (ENSMAMG00000003040) #22	GTF3C5 (ENSMAMG00000003020) #23	cel.1 (ENSMAMG00000002986) #24	zgc:92275 (ENSMAMG00000027330)	grin1a (ENSMAMG00000002912)	ENSMAMG00000002898	phpt1 (ENSMAMG00000002876)	ENSMAMG00000002809	ENSMAMG00000002781	ENSMAMG00000002762	slc31a2 (ENSMAMG00000002746)	niban2a (ENSMAMG00000002730)	stxbp1a (ENSMAMG00000002594)	ENSMAMG00000002557	ENSMAMG00000002505	ENSMAMG00000002459
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000159718	ENSGT00940000165076.b	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.a	ENSGT00390000011873.f	ENSGT00390000014148.e #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231.o.a.g #24	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00390000002738.a	ENSGT00940000164732.C	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000159996	ENSGT00940000154149.a.a	ENSGT00940000155127.a.a	ENSGT00940000154254.a	ENSGT00950000183002.B.a.b	ENSGT00940000155422.cb
Climbing perch	MODERN SPECIES	13	ENSATEG00000002085	ENSATEG00000002098	ENSATEG00000002149	ENSATEG00000029175	ENSATEG00000002156	tmem230a (ENSATEG00000002225)	ENSATEG00000002238	dpysl2b (ENSATEG00000002250)	bnip3lb (ENSATEG00000002325)	ppp2r2ab (ENSATEG00000002357)	gsna (ENSATEG00000002396)	stom (ENSATEG00000002457)	ENSATEG00000002500	GTF3C4 (ENSATEG00000002511)	tsc1b (ENSATEG00000002524) #21	GFI1B (ENSATEG00000002534) #22	GTF3C5 (ENSATEG00000002541) #23	cel.1 (ENSATEG00000002573) #24	zgc:92275 (ENSATEG00000003113)	grin1a (ENSATEG00000003151)	ENSATEG00000003268	phpt1 (ENSATEG00000003321)	ENSATEG00000003347	ENSATEG00000003434	ENSATEG00000003442	slc31a2 (ENSATEG00000003449)	niban2a (ENSATEG00000003458)	stxbp1a (ENSATEG00000003467)	ENSATEG00000003567	ENSATEG00000003575	ENSATEG00000027328
Siamese fighting fish	MODERN SPECIES	3	ENSBSLG00000020658	ENSBSLG00000020650	LRRTM4 (ENSBSLG00000020646)	ENSBSLG00000020637	tmem230a (ENSBSLG00000020633)	ENSBSLG00000020629	dpysl2b (ENSBSLG00000020555)	bnip3lb (ENSBSLG00000020538)	ppp2r2ab (ENSBSLG00000020348)	gsna (ENSBSLG00000019519)	ENSBSLG00000019438	stom (ENSBSLG00000019376)	ENSBSLG00000019371	GTF3C4 (ENSBSLG00000019368)	tsc1b (ENSBSLG00000019351) #21	GFI1B (ENSBSLG00000019345) #22	GTF3C5 (ENSBSLG00000019338) #23	cel.1 (ENSBSLG00000019313) #24	grin1a (ENSBSLG00000017219)	ENTPD2 (ENSBSLG00000016927)	slc27a6 (ENSBSLG00000016547)	ENSBSLG00000015122	ENSBSLG00000015028	PURG (ENSBSLG00000014967)	slc38a9 (ENSBSLG00000014601)	reep5 (ENSBSLG00000014587)	ENSBSLG00000014514	ENSBSLG00000014489	ZMIZ2 (ENSBSLG00000014403)	ENSBSLG00000014388	DUSP26 (ENSBSLG00000014373)
Cod	DUPLICATION
Cod	MODERN SPECIES	10	ENSGMOG00000002922	esm1 (ENSGMOG00000026076)	ARHGAP24 (ENSGMOG00000023603)	mapk10 (ENSGMOG00000002833)	ptpn13 (ENSGMOG00000002695)	ENSGMOG00000022883	sdad1 (ENSGMOG00000002646)	SLC10A6 (ENSGMOG00000002619)	ENSGMOG00000002584	ENSGMOG00000030800	ENSGMOG00000023817	ENSGMOG00000034814	ENSGMOG00000035375	ENSGMOG00000035669	ENSGMOG00000019128	ENSGMOG00000019123 #22	ENSGMOG00000019112 #23	ENSGMOG00000029641 #24	ENSGMOG00000019101 #24	ENSGMOG00000019096 #24	zgc:92275 (ENSGMOG00000019090)	ENSGMOG00000023703	grin1a (ENSGMOG00000016933)	ENSGMOG00000019069	phpt1 (ENSGMOG00000019064)	ENSGMOG00000019043	glulc (ENSGMOG00000019036)	ENSGMOG00000034194	ARRDC1 (ENSGMOG00000024332)	ehmt1b (ENSGMOG00000013810)	CACNA1B (ENSGMOG00000004596)
Cod	MODERN SPECIES	11	ENSGMOG00000035221	MAST1 (ENSGMOG00000002538)	rtbdn (ENSGMOG00000028213)	junbb (ENSGMOG00000002596)	hook2 (ENSGMOG00000018181)	trir (ENSGMOG00000034793)	ubn2b (ENSGMOG00000011209)	ENSGMOG00000033837	slc25a38a (ENSGMOG00000011227)	ENSGMOG00000011235	txn2 (ENSGMOG00000027676)	ENSGMOG00000032786	ENSGMOG00000011287	ENSGMOG00000026219	ENSGMOG00000032601	ENSGMOG00000036073 #22	pkn1b (ENSGMOG00000010775)	ENSGMOG00000029700	ENSGMOG00000009744	pglyrp6 (ENSGMOG00000009769)	ENSGMOG00000034468	ENSGMOG00000031947	ENSGMOG00000024815	ilf3b (ENSGMOG00000018300)	farsa (ENSGMOG00000018319)	syce2 (ENSGMOG00000022463)	gcdhb (ENSGMOG00000018332)	ENSGMOG00000018351	ENSGMOG00000018373	ENSGMOG00000037258	ENSGMOG00000011258
Elephant shark	MODERN SPECIES	1585	ENSCMIG00000014353	ak1 (ENSCMIG00000014354)	ass1 (ENSCMIG00000014371)	fubp3 (ENSCMIG00000014403)	ENSCMIG00000014410	ncs1b (ENSCMIG00000014411)	gpr107 (ENSCMIG00000014415)	fnbp1a (ENSCMIG00000014437)	SH2D3C (ENSCMIG00000014516)	cdk9 (ENSCMIG00000014543)	fpgs (ENSCMIG00000014545)	ENSCMIG00000014549	CEL (ENSCMIG00000014573) #24	GTF3C5 (ENSCMIG00000014592) #23	tsc1a (ENSCMIG00000014598) #21	GFI1B (ENSCMIG00000014600) #22	miga2 (ENSCMIG00000014604)	dolpp1 (ENSCMIG00000014608)	crata (ENSCMIG00000014615)	ptpa (ENSCMIG00000014698)	asb6 (ENSCMIG00000014721)	ntmt1 (ENSCMIG00000014723)	PRRX2 (ENSCMIG00000014727)	CARD9 (ENSCMIG00000014729)	ENSCMIG00000014731	ENSCMIG00000014732	ENSCMIG00000014736	ENSCMIG00000014740	pmpca (ENSCMIG00000014756)	inpp5e (ENSCMIG00000014781)	SEC16A (ENSCMIG00000014798)