Artiodactyla	ANCESTRAL SPECIES	7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00910000147033	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00940000153294.m.b	ENSGT00530000064194	ENSGT00390000016800
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00910000147033	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01030000235088	ENSGT00940000159718
Camelidae	ANCESTRAL SPECIES	5	ENSGT00950000183161.a.b	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26
Arabian camel	MODERN SPECIES	30	POMT1 (ENSCDRG00005006084) #7	UCK1 (ENSCDRG00005006047) #8	RAPGEF1 (ENSCDRG00005004831) #9	MED27 (ENSCDRG00005004656) #10	NTNG2 (ENSCDRG00005004638) #11	SETX (ENSCDRG00005004571) #12	TTF1 (ENSCDRG00005004487) #13	ENSCDRG00005004468 #14	CFAP77 (ENSCDRG00005004446) #15	BARHL1 (ENSCDRG00005004416) #16	DDX31 (ENSCDRG00005004319) #17	GTF3C4 (ENSCDRG00005004253) #18	AK8 (ENSCDRG00005004189) #19	SPACA9 (ENSCDRG00005004128) #20	TSC1 (ENSCDRG00005003981) #21	GFI1B (ENSCDRG00005003865) #22	GTF3C5 (ENSCDRG00005003789) #23	CEL (ENSCDRG00005003564) #24	RALGDS (ENSCDRG00005003140) #25	GBGT1 (ENSCDRG00005003053) #26	ENSCDRG00005003034 #27	LCN9 (ENSCDRG00005003024) #28	ENSCDRG00005003014 #29	ENSCDRG00005002998 #30	KCNT1 (ENSCDRG00005002073) #31	CAMSAP1 (ENSCDRG00005001959) #32	UBAC1 (ENSCDRG00005001921) #33	NACC2 (ENSCDRG00005001900) #34	TMEM250 (ENSCDRG00005001892) #35	LHX3 (ENSCDRG00005001876) #36	QSOX2 (ENSCDRG00005001830) #37
Alpaca	MODERN SPECIES	1653																ENSVPAG00000007557 #22
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00910000147033	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01060000249362	ENSGT00940000159718
Cetacea	ANCESTRAL SPECIES	9	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00910000147033	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a	ENSGT01060000249362
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT00390000017382	ENSGT00940000154745.a	ENSGT00390000014118	ENSGT00390000000378.d.b.fb.a.b	ENSGT00940000156959.B	ENSGT00940000157531.gb.b	ENSGT00940000157531.gb.a	ENSGT00940000159211.C	ENSGT00940000159789	ENSGT00940000154143.e	ENSGT00940000153385.b.a.a
Narwhal	MODERN SPECIES	312	PRRC2B (ENSMMNG00015014308)	POMT1 (ENSMMNG00015014401) #7	UCK1 (ENSMMNG00015014428) #8	PRRT1B (ENSMMNG00015014448)	RAPGEF1 (ENSMMNG00015014496) #9	MED27 (ENSMMNG00015014609) #10	NTNG2 (ENSMMNG00015014639) #11	SETX (ENSMMNG00015014662) #12	TTF1 (ENSMMNG00015014693) #13	CFAP77 (ENSMMNG00015014748) #15	BARHL1 (ENSMMNG00015014770) #16	DDX31 (ENSMMNG00015014795) #17	GTF3C4 (ENSMMNG00015014850) #18	AK8 (ENSMMNG00015014866) #19	TSC1 (ENSMMNG00015014899) #21	GFI1B (ENSMMNG00015014939) #22	GTF3C5 (ENSMMNG00015014986) #23	CEL (ENSMMNG00015015072) #24	RALGDS (ENSMMNG00015015227) #25	GBGT1 (ENSMMNG00015015453) #26	MRPS2 (ENSMMNG00015015534)	PIERCE1 (ENSMMNG00015015543)	PPP1R26 (ENSMMNG00015015550)	ENSMMNG00015015555	OLFM1 (ENSMMNG00015015563)	FCN1 (ENSMMNG00015014173)	COL5A1 (ENSMMNG00015014221)	RXRA (ENSMMNG00015014359)	WDR5 (ENSMMNG00015014388)	BRD3 (ENSMMNG00015014410)	ENSMMNG00015014467
Beluga whale	MODERN SPECIES	19	POMT1 (ENSDLEG00000005160) #7	UCK1 (ENSDLEG00000005153) #8	PRRT1B (ENSDLEG00000005148)	RAPGEF1 (ENSDLEG00000005079) #9	MED27 (ENSDLEG00000005036) #10	NTNG2 (ENSDLEG00000005024) #11	SETX (ENSDLEG00000005002) #12	TTF1 (ENSDLEG00000004956) #13	CFAP77 (ENSDLEG00000004940) #15	BARHL1 (ENSDLEG00000004938) #16	DDX31 (ENSDLEG00000004925) #17	GTF3C4 (ENSDLEG00000004892) #18	AK8 (ENSDLEG00000004877) #19	ENSDLEG00000004857 #20	TSC1 (ENSDLEG00000004840) #21	GFI1B (ENSDLEG00000004827) #22	GTF3C5 (ENSDLEG00000004811) #23	CEL (ENSDLEG00000004676) #24	RALGDS (ENSDLEG00000004623) #25	ENSDLEG00000004604	MRPS2 (ENSDLEG00000004586)	CUNH9orf116 (ENSDLEG00000004579)	PPP1R26 (ENSDLEG00000004572)	ENSDLEG00000004532	ENSDLEG00000004526	ENSDLEG00000004521	ENSDLEG00000004514	ENSDLEG00000004503	COL5A1 (ENSDLEG00000004399)	RXRA (ENSDLEG00000004352)	WDR5 (ENSDLEG00000004313)
Vaquita	MODERN SPECIES	17	POMT1 (ENSPSNG00000011380) #7	UCK1 (ENSPSNG00000011299) #8	PRRT1B (ENSPSNG00000011276)	RAPGEF1 (ENSPSNG00000010810) #9	MED27 (ENSPSNG00000010671) #10	NTNG2 (ENSPSNG00000010573) #11	SETX (ENSPSNG00000010504) #12	TTF1 (ENSPSNG00000010461) #13	CFAP77 (ENSPSNG00000010381) #15	BARHL1 (ENSPSNG00000010335) #16	DDX31 (ENSPSNG00000010312) #17	GTF3C4 (ENSPSNG00000010263) #18	AK8 (ENSPSNG00000010223) #19	ENSPSNG00000010143 #20	TSC1 (ENSPSNG00000009941) #21	GFI1B (ENSPSNG00000009574) #22	GTF3C5 (ENSPSNG00000009435) #23	CEL (ENSPSNG00000009284) #24	RALGDS (ENSPSNG00000009004) #25	GBGT1 (ENSPSNG00000008899) #26	MRPS2 (ENSPSNG00000008854)	PIERCE1 (ENSPSNG00000008821)	PPP1R26 (ENSPSNG00000008807)	ENSPSNG00000008765	OLFM1 (ENSPSNG00000009427)	ENSPSNG00000009306	ENSPSNG00000009178	COL5A1 (ENSPSNG00000008774)	RXRA (ENSPSNG00000008516)	WDR5 (ENSPSNG00000008438)	BRD3 (ENSPSNG00000008397)
Dolphin	MODERN SPECIES	1613													AK8 (ENSTTRG00000014370) #19	ENSTTRG00000014386 #20	TSC1 (ENSTTRG00000014398) #21	GFI1B (ENSTTRG00000014423) #22	GTF3C5 (ENSTTRG00000014428) #23	CEL (ENSTTRG00000014433) #24	RALGDS (ENSTTRG00000014436) #25	GBGT1 (ENSTTRG00000014438) #26
Sperm whale	MODERN SPECIES	4	ENSPCTG00005008296	PRRC2B (ENSPCTG00005008198)	POMT1 (ENSPCTG00005008076) #7	UCK1 (ENSPCTG00005008011) #8	RAPGEF1 (ENSPCTG00005005974) #9	SETX (ENSPCTG00005005641) #12	ENSPCTG00005005608	ENSPCTG00005005572 #10	ENSPCTG00005005551 #11	ENSPCTG00005005541 #10	DDX31 (ENSPCTG00005005522) #17	GTF3C4 (ENSPCTG00005005484) #18	AK8 (ENSPCTG00005005459) #19	ENSPCTG00005005432 #20	TSC1 (ENSPCTG00005005336) #21	GFI1B (ENSPCTG00005005104) #22	MRPS2 (ENSPCTG00005005046)	C13H9orf116 (ENSPCTG00005005022)	ENSPCTG00005004983	OLFM1 (ENSPCTG00005004913)	FCN1 (ENSPCTG00005004867)	COL5A1 (ENSPCTG00005004630)	WDR5 (ENSPCTG00005004552)	RXRA (ENSPCTG00005004526)	BRD3 (ENSPCTG00005004497)	BRD3OS (ENSPCTG00005004490)	VAV2 (ENSPCTG00005004328)	DBH (ENSPCTG00005017629)	FAM163B (ENSPCTG00005017596)	ADAMTSL2 (ENSPCTG00005017407)	MYMK (ENSPCTG00005017370)
Blue whale	MODERN SPECIES	17	POMT1 (ENSBMSG00010020652) #7	UCK1 (ENSBMSG00010020674) #8	RAPGEF1 (ENSBMSG00010020935) #9	ENSBMSG00010021721	MED27 (ENSBMSG00010021722) #10	NTNG2 (ENSBMSG00010021726) #11	SETX (ENSBMSG00010021728) #12	TTF1 (ENSBMSG00010021732) #13	CFAP77 (ENSBMSG00010021736) #15	BARHL1 (ENSBMSG00010021739) #16	DDX31 (ENSBMSG00010021741) #17	GTF3C4 (ENSBMSG00010021744) #18	AK8 (ENSBMSG00010021745) #19	SPACA9 (ENSBMSG00010021749) #20	TSC1 (ENSBMSG00010021751) #21	GFI1B (ENSBMSG00010021763) #22	GTF3C5 (ENSBMSG00010021786) #23	CEL (ENSBMSG00010021795) #24	RALGDS (ENSBMSG00010021812) #25	GBGT1 (ENSBMSG00010021845) #26	MRPS2 (ENSBMSG00010021868)	PIERCE1 (ENSBMSG00010021871)	PPP1R26 (ENSBMSG00010021874)	ENSBMSG00010021875	OLFM1 (ENSBMSG00010021879)	ENSBMSG00010021886	ENSBMSG00010021891	ENSBMSG00010021897	RXRA (ENSBMSG00010021899)	WDR5 (ENSBMSG00010004269)	BRD3 (ENSBMSG00010004279)
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Caprinae	ANCESTRAL SPECIES	27	ENSGT00950000183161.a.b	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Goat	MODERN SPECIES	2	PRRC2B (ENSCHIG00000019708)	POMT1 (ENSCHIG00000024383) #7	UCK1 (ENSCHIG00000011080) #8	RAPGEF1 (ENSCHIG00000017236) #9	MED27 (ENSCHIG00000022460) #10	NTNG2 (ENSCHIG00000013952) #11	SETX (ENSCHIG00000020740) #12	TTF1 (ENSCHIG00000016211) #13	CFAP77 (ENSCHIG00000022706) #15	BARHL1 (ENSCHIG00000024799) #16	DDX31 (ENSCHIG00000020011) #17	GTF3C4 (ENSCHIG00000006949) #18	AK8 (ENSCHIG00000026374) #19	SPACA9 (ENSCHIG00000011365) #20	TSC1 (ENSCHIG00000018208) #21	GFI1B (ENSCHIG00000026837) #22	GTF3C5 (ENSCHIG00000024162) #23	CEL (ENSCHIG00000025027) #24	RALGDS (ENSCHIG00000015793) #25	GBGT1 (ENSCHIG00000011247) #26	ENSCHIG00000023482 ##28	PAEP (ENSCHIG00000014239) ##28	GLT6D1 (ENSCHIG00000019179) ##26	ENSCHIG00000025929 #28	ENSCHIG00000018572	KCNT1 (ENSCHIG00000007884) #31	CAMSAP1 (ENSCHIG00000016116) #32	UBAC1 (ENSCHIG00000018504) #33	NACC2 (ENSCHIG00000007966) #34	TMEM250 (ENSCHIG00000010273) #35	LHX3 (ENSCHIG00000024793) #36
Rambouillet Sheep	MODERN SPECIES	19	PLPP7 (ENSOARG00020000737)	PRRC2B (ENSOARG00020000660)	POMT1 (ENSOARG00020000540) #7	UCK1 (ENSOARG00020000489) #8	RAPGEF1 (ENSOARG00020000271) #9	MED27 (ENSOARG00020000195) #10	NTNG2 (ENSOARG00020000152) #11	TTF1 (ENSOARG00020017929) #13	CFAP77 (ENSOARG00020017851) #15	BARHL1 (ENSOARG00020017803) #16	DDX31 (ENSOARG00020017578) #17	GTF3C4 (ENSOARG00020017513) #18	AK8 (ENSOARG00020017399) #19	SPACA9 (ENSOARG00020017323) #20	TSC1 (ENSOARG00020017058) #21	GFI1B (ENSOARG00020016632) #22	GTF3C5 (ENSOARG00020016366) #23	CEL (ENSOARG00020016231) #24	RALGDS (ENSOARG00020014951) #25	GBGT1 (ENSOARG00020014323) #26	ENSOARG00020014156 ##28	ENSOARG00020013569 ##28	GLT6D1 (ENSOARG00020013449) ##26	ENSOARG00020013271 #28	KCNT1 (ENSOARG00020005353) #31	CAMSAP1 (ENSOARG00020004888) #32	PAEP (ENSOARG00020004839) ##28	UBAC1 (ENSOARG00020004817) #33	NACC2 (ENSOARG00020004779) #34	TMEM250 (ENSOARG00020004761) #35	LHX3 (ENSOARG00020004662) #36
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT01000000214793	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT01100000263569.a.a.b	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Bos	ANCESTRAL SPECIES	5	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT01000000214793	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT01100000263569.a.a.b	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT01100000263569.a.a.b	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35	ENSGT00940000160316 #36
Wild yak	MODERN SPECIES	1456									ENSBMUG00000003674	BARHL1 (ENSBMUG00000003728) #16	DDX31 (ENSBMUG00000003829) #17	GTF3C4 (ENSBMUG00000003856) #18	AK8 (ENSBMUG00000003890) #19	SPACA9 (ENSBMUG00000003927) #20	TSC1 (ENSBMUG00000004198) #21	GFI1B (ENSBMUG00000004554) #22	GTF3C5 (ENSBMUG00000004687) #23	CEL (ENSBMUG00000004733) #24	RALGDS (ENSBMUG00000004883) #25	GBGT1 (ENSBMUG00000004978) #26
Domestic yak	MODERN SPECIES	28	PRRC2B (ENSBGRG00000012453)	POMT1 (ENSBGRG00000012652) #7	UCK1 (ENSBGRG00000012820) #8	RAPGEF1 (ENSBGRG00000013023) #9	MED27 (ENSBGRG00000013975) #10	NTNG2 (ENSBGRG00000014300) #11	SETX (ENSBGRG00000014400) #12	TTF1 (ENSBGRG00000014543) #13	CFAP77 (ENSBGRG00000014588) #15	BARHL1 (ENSBGRG00000014646) #16	DDX31 (ENSBGRG00000014697) #17	GTF3C4 (ENSBGRG00000015208) #18	AK8 (ENSBGRG00000015381) #19	SPACA9 (ENSBGRG00000015688) #20	ENSBGRG00000015798 #21	GFI1B (ENSBGRG00000015879) #22	GTF3C5 (ENSBGRG00000016199) #23	CEL (ENSBGRG00000016811) #24	RALGDS (ENSBGRG00000016946) #25	GBGT1 (ENSBGRG00000018685) #26	ENSBGRG00000018826 ##28	ENSBGRG00000018918 ##28	GLT6D1 (ENSBGRG00000019100) ##26	ENSBGRG00000019170 #28	ENSBGRG00000019236	KCNT1 (ENSBGRG00000019473) #31	CAMSAP1 (ENSBGRG00000024559) #32	UBAC1 (ENSBGRG00000024753) #33	NACC2 (ENSBGRG00000024826) #34	ENSBGRG00000024840	LHX3 (ENSBGRG00000024850) #36
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT01000000214793	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT01100000263569.a.a.a.a	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.b.b.d ##28	ENSGT01050000244868.a.a.a.b.b.c ##28	ENSGT00950000182858.B.a.c ##26	ENSGT01050000244868.a.a.a.b.a.a.b #28	ENSGT00390000000656	ENSGT00940000156880 #31	ENSGT00950000182975.a.a.b #32	ENSGT00390000014658 #33	ENSGT00940000159244 #34	ENSGT00560000078707 #35
Hybrid Bos Indicus	MODERN SPECIES	2	UCK1 (ENSBIXG00005012183) #8	PRRT1B (ENSBIXG00005012138)	RAPGEF1 (ENSBIXG00005012047) #9	MED27 (ENSBIXG00005011937) #10	NTNG2 (ENSBIXG00005011889) #11	SETX (ENSBIXG00005011828) #12	TTF1 (ENSBIXG00005011724) #13	ENSBIXG00005011692	CFAP77 (ENSBIXG00005011671) #15	BARHL1 (ENSBIXG00005011650) #16	DDX31 (ENSBIXG00005011618) #17	GTF3C4 (ENSBIXG00005011513) #18	AK8 (ENSBIXG00005001111) #19	SPACA9 (ENSBIXG00005011449) #20	TSC1 (ENSBIXG00005011396) #21	GFI1B (ENSBIXG00005011310) #22	GTF3C5 (ENSBIXG00005011251) #23	CEL (ENSBIXG00005011145) #24	RALGDS (ENSBIXG00005011070) #25	GBGT1 (ENSBIXG00005010899) #26	ENSBIXG00005010804	ENSBIXG00005010799 ##28	ENSBIXG00005010741 ##28	ENSBIXG00005010722 ##28	GLT6D1 (ENSBIXG00005010707) ##26	ENSBIXG00005000638 #28	ENSBIXG00005010677	KCNT1 (ENSBIXG00005010453) #31	CAMSAP1 (ENSBIXG00005008646) #32	UBAC1 (ENSBIXG00005008614) #33	NACC2 (ENSBIXG00005008585) #34
Cow	MODERN SPECIES	2	PRRT1B (ENSBTAG00000052831)	RAPGEF1 (ENSBTAG00000020791) #9	MED27 (ENSBTAG00000000382) #10	ENSBTAG00000053838	NTNG2 (ENSBTAG00000007235) #11	SETX (ENSBTAG00000024822) #12	TTF1 (ENSBTAG00000018710) #13	ENSBTAG00000023697	CFAP77 (ENSBTAG00000019254) #15	BARHL1 (ENSBTAG00000023801) #16	DDX31 (ENSBTAG00000003530) #17	GTF3C4 (ENSBTAG00000004091) #18	AK8 (ENSBTAG00000004092) #19	SPACA9 (ENSBTAG00000005189) #20	TSC1 (ENSBTAG00000005190) #21	GFI1B (ENSBTAG00000012772) #22	GTF3C5 (ENSBTAG00000021373) #23	CEL (ENSBTAG00000007486) #24	RALGDS (ENSBTAG00000004194) #25	GBGT1 (ENSBTAG00000030319) #26	ENSBTAG00000000893 ##28	ENSBTAG00000048091 ##28	PAEP (ENSBTAG00000014678) ##28	GLT6D1 (ENSBTAG00000020249) ##26	LCN9 (ENSBTAG00000038972) #28	KCNT1 (ENSBTAG00000018975) #31	CAMSAP1 (ENSBTAG00000006008) #32	UBAC1 (ENSBTAG00000039851) #33	NACC2 (ENSBTAG00000020490) #34	TMEM250 (ENSBTAG00000046939)	LHX3 (ENSBTAG00000011124) #36
American bison	MODERN SPECIES	3289	PRRT1B (ENSBBBG00000009687)	RAPGEF1 (ENSBBBG00000009731) #9	MED27 (ENSBBBG00000009741) #10	ENSBBBG00000009748	NTNG2 (ENSBBBG00000009755) #11	SETX (ENSBBBG00000009759) #12	ENSBBBG00000009760	ENSBBBG00000007875 #13	CFAP77 (ENSBBBG00000009763) #15	BARHL1 (ENSBBBG00000001614) #16	DDX31 (ENSBBBG00000009774) #17	ENSBBBG00000009777 #18	AK8 (ENSBBBG00000009783) #19	ENSBBBG00000009785 #20	TSC1 (ENSBBBG00000009854) #21	GFI1B (ENSBBBG00000009900) #22	GTF3C5 (ENSBBBG00000009918) #23	CEL (ENSBBBG00000009935) #24	RALGDS (ENSBBBG00000001671) #25	GBGT1 (ENSBBBG00000001685) #26	ENSBBBG00000009981 ##28	ENSBBBG00000009984 ##28	ENSBBBG00000010016 ##28	GLT6D1 (ENSBBBG00000010031) ##26	ENSBBBG00000010035 #28
Siberian musk deer	MODERN SPECIES	1178	PRRC2B (ENSMMSG00000008368)	POMT1 (ENSMMSG00000008544) #7	UCK1 (ENSMMSG00000008624) #8	RAPGEF1 (ENSMMSG00000008741) #9	MED27 (ENSMMSG00000009213) #10	NTNG2 (ENSMMSG00000009330) #11	SETX (ENSMMSG00000009473) #12	ENSMMSG00000009527 #13	CFAP77 (ENSMMSG00000009596) #15	BARHL1 (ENSMMSG00000009623) #16	DDX31 (ENSMMSG00000009648) #17	GTF3C4 (ENSMMSG00000009716) #18	AK8 (ENSMMSG00000009755) #19	SPACA9 (ENSMMSG00000009874) #20	TSC1 (ENSMMSG00000009923) #21	GFI1B (ENSMMSG00000010068) #22	GTF3C5 (ENSMMSG00000010368) #23	CEL (ENSMMSG00000010762) #24	RALGDS (ENSMMSG00000010851) #25	GBGT1 (ENSMMSG00000010991) #26	ENSMMSG00000011070 ##28	ENSMMSG00000011095 ##28	ENSMMSG00000011134 ##28	GLT6D1 (ENSMMSG00000011226) ##26	ENSMMSG00000011276 #28	KCNT1 (ENSMMSG00000011544) #31	CAMSAP1 (ENSMMSG00000017438) #32	UBAC1 (ENSMMSG00000017512) #33	NACC2 (ENSMMSG00000017566) #34	LHX3 (ENSMMSG00000017607) #36	QSOX2 (ENSMMSG00000017697) #37
Yarkand deer	MODERN SPECIES	2	PRRC2B (ENSCHYG00000022095)	POMT1 (ENSCHYG00000022562) #7	ENSCHYG00000022691 #8	RAPGEF1 (ENSCHYG00000022836) #9	MED27 (ENSCHYG00000023708) #10	NTNG2 (ENSCHYG00000023956) #11	SETX (ENSCHYG00000024123) #12	TTF1 (ENSCHYG00000024227) #13	CFAP77 (ENSCHYG00000024295) #15	BARHL1 (ENSCHYG00000024337) #16	DDX31 (ENSCHYG00000024361) #17	GTF3C4 (ENSCHYG00000024487) #18	AK8 (ENSCHYG00000024548) #19	SPACA9 (ENSCHYG00000024687) #20	TSC1 (ENSCHYG00000024737) #21	GFI1B (ENSCHYG00000024813) #22	GTF3C5 (ENSCHYG00000024889) #23	CEL (ENSCHYG00000025109) #24	RALGDS (ENSCHYG00000025294) #25	GBGT1 (ENSCHYG00000025531) #26	ENSCHYG00000025629	ENSCHYG00000025640 ##28	ENSCHYG00000025684 ##28	ENSCHYG00000025740 ##28	GLT6D1 (ENSCHYG00000025780) ##26	ENSCHYG00000025799 #28	SOHLH1 (ENSCHYG00000025814)	KCNT1 (ENSCHYG00000025895) #31	CAMSAP1 (ENSCHYG00000026516) #32	UBAC1 (ENSCHYG00000026555) #33	NACC2 (ENSCHYG00000026588) #34
Suina	ANCESTRAL SPECIES	37	ENSGT00940000158049 #7	ENSGT01020000230412.A.c.a #8	ENSGT00940000163383	ENSGT00940000156235 #9	ENSGT00390000012207 #10	ENSGT00940000153601.a.a #11	ENSGT00940000160918 #12	ENSGT00940000159729 #13	ENSGT00390000014476 #15	ENSGT00940000160428 #16	ENSGT00550000075041 #17	ENSGT00390000011873 #18	ENSGT00940000161613 #19	ENSGT00390000007746 #20	ENSGT00390000014148 #21	ENSGT00940000160010 #22	ENSGT00390000004458 #23	ENSGT00940000156231 #24	ENSGT00940000153181.z #25	ENSGT00950000182858.A.b.b #26	ENSGT01050000244868.a.a.a.a.a.b ##28	ENSGT01050000244868.a.a.a.a.b ##28	ENSGT00950000182858.A.a.a ##26	ENSGT00390000006980	ENSGT00390000004339	ENSGT00940000153294.m.b	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00530000064194	ENSGT00390000016800	ENSGT00530000064123
Pig	MODERN SPECIES		POMT1 (ENSSSCG00000005716) #7	UCK1 (ENSSSCG00000005717) #8	PRRT1B (ENSSSCG00000031465)	RAPGEF1 (ENSSSCG00000005719) #9	MED27 (ENSSSCG00000005720) #10	NTNG2 (ENSSSCG00000005723) #11	SETX (ENSSSCG00000005724) #12	TTF1 (ENSSSCG00000005725) #13	CFAP77 (ENSSSCG00000005727) #15	BARHL1 (ENSSSCG00000005730) #16	DDX31 (ENSSSCG00000005729) #17	GTF3C4 (ENSSSCG00000005731) #18	AK8 (ENSSSCG00000039188) #19	SPACA9 (ENSSSCG00000022250) #20	TSC1 (ENSSSCG00000046003) #21	GFI1B (ENSSSCG00000005737) #22	ENSSSCG00000032110	CEL (ENSSSCG00000028671) #24	RALGDS (ENSSSCG00000005738) #25	GBGT1 (ENSSSCG00000031532) #26	ENSSSCG00000043049 ##28	ENSSSCG00000035964 ##28	SURF6 (ENSSSCG00000032106)	MED22 (ENSSSCG00000031941)	ENSSSCG00000035904	ENSSSCG00000043356	SURF1 (ENSSSCG00000035727)	SURF2 (ENSSSCG00000038459)	SURF4 (ENSSSCG00000040710)	STKLD1 (ENSSSCG00000031407)	REXO4 (ENSSSCG00000023173)
Chacoan peccary	MODERN SPECIES	887	PRRC2B (ENSCWAG00000006791)	POMT1 (ENSCWAG00000006722) #7	UCK1 (ENSCWAG00000006666) #8	RAPGEF1 (ENSCWAG00000006397) #9	MED27 (ENSCWAG00000006239) #10	NTNG2 (ENSCWAG00000006197) #11	SETX (ENSCWAG00000006034) #12	TTF1 (ENSCWAG00000005976) #13	CFAP77 (ENSCWAG00000005915) #15	BARHL1 (ENSCWAG00000005894) #16	DDX31 (ENSCWAG00000005734) #17	GTF3C4 (ENSCWAG00000005692) #18	AK8 (ENSCWAG00000005678) #19	SPACA9 (ENSCWAG00000005647) #20	TSC1 (ENSCWAG00000005535) #21	GFI1B (ENSCWAG00000005093) #22	GTF3C5 (ENSCWAG00000005017) #23	CEL (ENSCWAG00000004938) #24	RALGDS (ENSCWAG00000004098) #25	GBGT1 (ENSCWAG00000003939) #26	ENSCWAG00000003886 ##28	LCN1 (ENSCWAG00000003847) ##28	ENSCWAG00000003813 ##28	MRPS2 (ENSCWAG00000003786)	PIERCE1 (ENSCWAG00000006500)	PPP1R26 (ENSCWAG00000006492)