Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Glires	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00510000049735	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.b.c #11	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.k #34	ENSGT00950000183207.b.e.k #35	ENSGT00950000183150.a.a #36	ENSGT00940000156241 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.b.c #11	ENSGT01080000257420.C.b.b.b.d #12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.k #34	ENSGT00950000183207.b.e.k #35	ENSGT00950000183150.a.a #36	ENSGT00940000156241 #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.b.c #11	ENSGT01080000257420.C.b.b.b.d #12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.k #34	ENSGT00950000183207.b.e.k #35	ENSGT00950000183150.a.a #36	ENSGT00940000156241 #37
Degu	MODERN SPECIES	97	RAB5C (ENSODEG00000017920) #7	KCNH4 (ENSODEG00000018039) #8	HCRT (ENSODEG00000017993) #9	GHDC (ENSODEG00000017948) #10	ENSODEG00000018000 #11	ENSODEG00000018044 #12	ENSODEG00000017971 #13	CAVIN1 (ENSODEG00000017991) #14	ATP6V0A1 (ENSODEG00000017959) #15	NAGLU (ENSODEG00000017945) #16	HSD17B1 (ENSODEG00000018063) #17	COASY (ENSODEG00000018042) #18	MLX (ENSODEG00000017951) #19	PSMC3IP (ENSODEG00000017995) #20	RETREG3 (ENSODEG00000018095) #21	TUBG1 (ENSODEG00000018022) #22	TUBG2 (ENSODEG00000018001) #23	PLEKHH3 (ENSODEG00000018103) #24	CCR10 (ENSODEG00000017981) #25	CNTNAP1 (ENSODEG00000018056) #26	ENSODEG00000017986 #27	RAMP2 (ENSODEG00000017963) #28	VPS25 (ENSODEG00000018342) #29	WNK4 (ENSODEG00000018004) #30	COA3 (ENSODEG00000018075) #31	CNTD1 (ENSODEG00000018061) #32	BECN1 (ENSODEG00000017992) #33	ENSODEG00000018174 #34	AOC3 (ENSODEG00000018014) #35	G6PC1 (ENSODEG00000017978) #36	AARSD1 (ENSODEG00000018082) #37
Long-tailed chinchilla	MODERN SPECIES	158	RAB5C (ENSCLAG00000016650) #7	KCNH4 (ENSCLAG00000016815) #8	HCRT (ENSCLAG00000016694) #9	GHDC (ENSCLAG00000015892) #10	ENSCLAG00000016318 #11	ENSCLAG00000016243 #12	STAT3 (ENSCLAG00000014721) #13	CAVIN1 (ENSCLAG00000016470) #14	ATP6V0A1 (ENSCLAG00000016413) #15	NAGLU (ENSCLAG00000016699) #16	HSD17B1 (ENSCLAG00000016130) #17	COASY (ENSCLAG00000016171) #18	MLX (ENSCLAG00000017140) #19	PSMC3IP (ENSCLAG00000015875) #20	RETREG3 (ENSCLAG00000016186) #21	TUBG1 (ENSCLAG00000015846) #22	PLEKHH3 (ENSCLAG00000015237) #24	CCR10 (ENSCLAG00000014760) #25	CNTNAP1 (ENSCLAG00000014690) #26	EZH1 (ENSCLAG00000016299) #27	RAMP2 (ENSCLAG00000015276) #28	VPS25 (ENSCLAG00000016527) #29	WNK4 (ENSCLAG00000016166) #30	COA3 (ENSCLAG00000015591) #31	CNTD1 (ENSCLAG00000016092) #32	BECN1 (ENSCLAG00000014888) #33	PSME3 (ENSCLAG00000016528) #34	AOC3 (ENSCLAG00000016573) #35	G6PC1 (ENSCLAG00000016018) #36	ENSCLAG00000018072	AARSD1 (ENSCLAG00000016486) #37
Guinea pig	MODERN SPECIES	53	HSPB9 (ENSCPOG00000026480)	RAB5C (ENSCPOG00000011190) #7	KCNH4 (ENSCPOG00000027074) #8	HCRT (ENSCPOG00000040052) #9	ENSCPOG00000026466 #11	ENSCPOG00000012203 #12	STAT3 (ENSCPOG00000007939) #13	CAVIN1 (ENSCPOG00000036454) #14	ATP6V0A1 (ENSCPOG00000011417) #15	NAGLU (ENSCPOG00000010613) #16	HSD17B1 (ENSCPOG00000021970) #17	COASY (ENSCPOG00000006117) #18	MLX (ENSCPOG00000035377) #19	PSMC3IP (ENSCPOG00000022571) #20	RETREG3 (ENSCPOG00000002844) #21	TUBG1 (ENSCPOG00000033099) #22	TUBG2 (ENSCPOG00000008842) #23	PLEKHH3 (ENSCPOG00000010080) #24	CCR10 (ENSCPOG00000008847) #25	CNTNAP1 (ENSCPOG00000008851) #26	EZH1 (ENSCPOG00000012533) #27	RAMP2 (ENSCPOG00000034336) #28	VPS25 (ENSCPOG00000012538) #29	WNK4 (ENSCPOG00000035356) #30	COA3 (ENSCPOG00000022659) #31	CNTD1 (ENSCPOG00000012545) #32	BECN1 (ENSCPOG00000012547) #33	PSME3 (ENSCPOG00000012552) #34	AOC3 (ENSCPOG00000012559) #35	G6PC1 (ENSCPOG00000013409) #36	AARSD1 (ENSCPOG00000030193) #37
Naked mole-rat female	MODERN SPECIES	12	DHX58 (ENSHGLG00000011529)	KAT2A (ENSHGLG00000014215)	ENSHGLG00000032125	ENSHGLG00000046408	KCNH4 (ENSHGLG00000011673) #8	ENSHGLG00000037543 #10	ENSHGLG00000012522 #11	STAT3 (ENSHGLG00000010906) #13	CAVIN1 (ENSHGLG00000018343) #14	ATP6V0A1 (ENSHGLG00000018815) #15	NAGLU (ENSHGLG00000011489) #16	COASY (ENSHGLG00000012414) #18	MLX (ENSHGLG00000014995) #19	ENSHGLG00000013066 #20	RETREG3 (ENSHGLG00000011981) #21	TUBG1 (ENSHGLG00000012574) #22	TUBG2 (ENSHGLG00000011925) #23	PLEKHH3 (ENSHGLG00000035935) #24	CCR10 (ENSHGLG00000011006) #25	CNTNAP1 (ENSHGLG00000018356) #26	ENSHGLG00000010367 #27	RAMP2 (ENSHGLG00000040881) #28	VPS25 (ENSHGLG00000018591) #29	WNK4 (ENSHGLG00000014338) #30	COA3 (ENSHGLG00000031975) #31	CNTD1 (ENSHGLG00000037081) #32	BECN1 (ENSHGLG00000017981) #33	PSME3 (ENSHGLG00000013508) #34	AOC3 (ENSHGLG00000010734) #35	ENSHGLG00000037349 ##35	G6PC1 (ENSHGLG00000009732) #36
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005000284 #7	KCNH4 (ENSSVLG00005000254) #8	HCRT (ENSSVLG00005000222) #9	GHDC (ENSSVLG00005000199) #10	STAT5B (ENSSVLG00005004598) ##12	STAT5A (ENSSVLG00005004549) ##12	STAT3 (ENSSVLG00005004451) #13	CAVIN1 (ENSSVLG00005004409) #14	ATP6V0A1 (ENSSVLG00005004340) #15	ENSSVLG00005004269 #16	HSD17B1 (ENSSVLG00005004237) #17	COASY (ENSSVLG00005004216) #18	MLX (ENSSVLG00005004171) #19	PSMC3IP (ENSSVLG00005004134) #20	RETREG3 (ENSSVLG00005004111) #21	TUBG1 (ENSSVLG00005004092) #22	TUBG2 (ENSSVLG00005004078) #23	PLEKHH3 (ENSSVLG00005004060) #24	CCR10 (ENSSVLG00005004046) #25	CNTNAP1 (ENSSVLG00005004025) #26	EZH1 (ENSSVLG00005003960) #27	RAMP2 (ENSSVLG00005003908) #28	VPS25 (ENSSVLG00005003880) #29	WNK4 (ENSSVLG00005003835) #30	COA3 (ENSSVLG00005003810) #31	CNTD1 (ENSSVLG00005003791) #32	BECN1 (ENSSVLG00005003759) #33	ENSSVLG00005003672 #34	AOC2 (ENSSVLG00005003596) ##35	ENSSVLG00005003490 #35	ENSSVLG00005003399 #35
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.i.a #35
Alpin marmot	MODERN SPECIES	42	RAB5C (ENSMMMG00000006088) #7	KCNH4 (ENSMMMG00000006041) #8	HCRT (ENSMMMG00000006029) #9	GHDC (ENSMMMG00000006013) #10	STAT5B (ENSMMMG00000005973) ##12	STAT5A (ENSMMMG00000005892) ##12	STAT3 (ENSMMMG00000005779) #13	CAVIN1 (ENSMMMG00000005775) #14	ATP6V0A1 (ENSMMMG00000005552) #15	NAGLU (ENSMMMG00000005528) #16	HSD17B1 (ENSMMMG00000005512) #17	COASY (ENSMMMG00000005496) #18	MLX (ENSMMMG00000005464) #19	PSMC3IP (ENSMMMG00000005444) #20	RETREG3 (ENSMMMG00000005418) #21	TUBG1 (ENSMMMG00000005405) #22	TUBG2 (ENSMMMG00000005392) #23	PLEKHH3 (ENSMMMG00000005351) #24	CCR10 (ENSMMMG00000005331) #25	ENSMMMG00000005324	CNTNAP1 (ENSMMMG00000005268) #26	EZH1 (ENSMMMG00000005196) #27	ENSMMMG00000005184 #28	VPS25 (ENSMMMG00000005115) #29	WNK4 (ENSMMMG00000005066) #30	COA3 (ENSMMMG00000005055) #31	CNTD1 (ENSMMMG00000005038) #32	BECN1 (ENSMMMG00000004985) #33	PSME3 (ENSMMMG00000004954) #34	AOC2 (ENSMMMG00000004937) ##35	ENSMMMG00000004904 #35
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.j #35	ENSGT00950000183150.a.a #36	ENSGT00940000156241.e.a #37
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	46	KCNH4 (ENSUPAG00010009543) #8	HCRT (ENSUPAG00010009569) #9	GHDC (ENSUPAG00010009572) #10	ENSUPAG00010009583 ##12	ENSUPAG00010009596 ##12	STAT5A (ENSUPAG00010009605) ##12	STAT3 (ENSUPAG00010009648) #13	CAVIN1 (ENSUPAG00010009709) #14	ATP6V0A1 (ENSUPAG00010009720) #15	NAGLU (ENSUPAG00010009802) #16	HSD17B1 (ENSUPAG00010009808) #17	COASY (ENSUPAG00010009813) #18	MLX (ENSUPAG00010009827) #19	PSMC3IP (ENSUPAG00010009849) #20	RETREG3 (ENSUPAG00010009853) #21	TUBG1 (ENSUPAG00010009862) #22	ENSUPAG00010009880 #22	PLEKHH3 (ENSUPAG00010009888) #24	CNTNAP1 (ENSUPAG00010009924) #26	CCR10 (ENSUPAG00010009957) #25	EZH1 (ENSUPAG00010009961) #27	RAMP2 (ENSUPAG00010010079) #28	VPS25 (ENSUPAG00010010087) #29	WNK4 (ENSUPAG00010010115) #30	COA3 (ENSUPAG00010010147) #31	CNTD1 (ENSUPAG00010010156) #32	BECN1 (ENSUPAG00010010164) #33	PSME3 (ENSUPAG00010010193) #34	AOC2 (ENSUPAG00010010206) ##35	AOC3 (ENSUPAG00010010214) #35	G6PC1 (ENSUPAG00010010230) #36
Arctic ground squirrel	MODERN SPECIES	46	HCRT (ENSUPAG00010009569) #9	GHDC (ENSUPAG00010009572) #10	ENSUPAG00010009583 ##12	ENSUPAG00010009596 ##12	STAT5A (ENSUPAG00010009605) ##12	STAT3 (ENSUPAG00010009648) #13	CAVIN1 (ENSUPAG00010009709) #14	ATP6V0A1 (ENSUPAG00010009720) #15	NAGLU (ENSUPAG00010009802) #16	HSD17B1 (ENSUPAG00010009808) #17	COASY (ENSUPAG00010009813) #18	MLX (ENSUPAG00010009827) #19	PSMC3IP (ENSUPAG00010009849) #20	RETREG3 (ENSUPAG00010009853) #21	TUBG1 (ENSUPAG00010009862) #22	ENSUPAG00010009880 #22	PLEKHH3 (ENSUPAG00010009888) #24	CNTNAP1 (ENSUPAG00010009924) #26	CCR10 (ENSUPAG00010009957) #25	EZH1 (ENSUPAG00010009961) #27	RAMP2 (ENSUPAG00010010079) #28	VPS25 (ENSUPAG00010010087) #29	WNK4 (ENSUPAG00010010115) #30	COA3 (ENSUPAG00010010147) #31	CNTD1 (ENSUPAG00010010156) #32	BECN1 (ENSUPAG00010010164) #33	PSME3 (ENSUPAG00010010193) #34	AOC2 (ENSUPAG00010010206) ##35	AOC3 (ENSUPAG00010010214) #35	G6PC1 (ENSUPAG00010010230) #36	AARSD1 (ENSUPAG00010010235) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Muroidea	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.r #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.r #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Chinese hamster chok1gshd	MODERN SPECIES	33	Kcnh4 (ENSCGRG00001019735) #8	Hcrt (ENSCGRG00001019538) #9	Ghdc (ENSCGRG00001024952) #10	ENSCGRG00001015122 ##12	ENSCGRG00001019326	Stat5a (ENSCGRG00001021305) ##12	Stat3 (ENSCGRG00001013136) #13	Cavin1 (ENSCGRG00001017248) #14	Atp6v0a1 (ENSCGRG00001012097) #15	Naglu (ENSCGRG00001003319) #16	Hsd17b1 (ENSCGRG00001014185) #17	Coasy (ENSCGRG00001017604) #18	Mlx (ENSCGRG00001011276) #19	Psmc3ip (ENSCGRG00001017004) #20	Retreg3 (ENSCGRG00001011912) #21	Tubg1 (ENSCGRG00001001818) #22	ENSCGRG00001012361	Tubg2 (ENSCGRG00001018359) #23	Plekhh3 (ENSCGRG00001016828) #24	Ccr10 (ENSCGRG00001000112) #25	Cntnap1 (ENSCGRG00001023354) #26	Ezh1 (ENSCGRG00001004522) #27	Ramp2 (ENSCGRG00001006427) #28	Vps25 (ENSCGRG00001015636) #29	Wnk4 (ENSCGRG00001013436) #30	Coa3 (ENSCGRG00001024599) #31	Cntd1 (ENSCGRG00001014932) #32	Becn1 (ENSCGRG00001019061) #33	ENSCGRG00001014333 #34	Aoc2 (ENSCGRG00001018276) ##35	Aoc3 (ENSCGRG00001017577) #35
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.r #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Northern American deer mouse	MODERN SPECIES	21	Rab5c (ENSPEMG00000017971) #7	Kcnh4 (ENSPEMG00000015672) #8	Hcrt (ENSPEMG00000028528) #9	Ghdc (ENSPEMG00000016782) #10	Stat5b (ENSPEMG00000010332) ##12	Stat5a (ENSPEMG00000015265) ##12	Stat3 (ENSPEMG00000015860) #13	Cavin1 (ENSPEMG00000027244) #14	Atp6v0a1 (ENSPEMG00000004552) #15	Naglu (ENSPEMG00000000599) #16	Hsd17b1 (ENSPEMG00000010252) #17	Coasy (ENSPEMG00000012437) #18	Mlx (ENSPEMG00000015965) #19	Psmc3ip (ENSPEMG00000017694) #20	Retreg3 (ENSPEMG00000013772) #21	Tubg1 (ENSPEMG00000027277) #22	Tubg2 (ENSPEMG00000026832) #23	Plekhh3 (ENSPEMG00000011634) #24	Ccr10 (ENSPEMG00000012066) #25	Cntnap1 (ENSPEMG00000011417) #26	Ezh1 (ENSPEMG00000003694) #27	Ramp2 (ENSPEMG00000017016) #28	Vps25 (ENSPEMG00000011669) #29	Wnk4 (ENSPEMG00000011882) #30	Coa3 (ENSPEMG00000019006) #31	Cntd1 (ENSPEMG00000007328) #32	ENSPEMG00000027472	Psme3 (ENSPEMG00000013099) #34	Aoc2 (ENSPEMG00000018257) ##35	Aoc3 (ENSPEMG00000012019) #35	G6pc (ENSPEMG00000025140) #36
Prairie vole	MODERN SPECIES	127	ENSMOCG00000018531 #7	Kcnh4 (ENSMOCG00000005108) #8	Hcrt (ENSMOCG00000005402) #9	Ghdc (ENSMOCG00000020439) #10	Stat5b (ENSMOCG00000011875) ##12	Stat5a (ENSMOCG00000000170) ##12	Stat3 (ENSMOCG00000011223) #13	Cavin1 (ENSMOCG00000008907) #14	Atp6v0a1 (ENSMOCG00000003199) #15	Naglu (ENSMOCG00000004738) #16	Hsd17b1 (ENSMOCG00000021088) #17	Coasy (ENSMOCG00000012906) #18	Mlx (ENSMOCG00000018860) #19	Psmc3ip (ENSMOCG00000017934) #20	Retreg3 (ENSMOCG00000000335) #21	Tubg1 (ENSMOCG00000018346) #22	Tubg2 (ENSMOCG00000002587) #23	Plekhh3 (ENSMOCG00000006637) #24	Ccr10 (ENSMOCG00000009310) #25	Cntnap1 (ENSMOCG00000006883) #26	Ezh1 (ENSMOCG00000021032) #27	Ramp2 (ENSMOCG00000014445) #28	Vps25 (ENSMOCG00000018897) #29	Wnk4 (ENSMOCG00000016124) #30	ENSMOCG00000021678 #31	Cntd1 (ENSMOCG00000007350) #32	Becn1 (ENSMOCG00000010684) #33	ENSMOCG00000002970 #34	Aoc2 (ENSMOCG00000018362) ##35	Aoc3 (ENSMOCG00000016609) #35	G6pc (ENSMOCG00000002126) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Mus	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
spretus	MODERN SPECIES	2	Rab5c (MGP_SPRETEiJ_G0018027) #7	Kcnh4 (MGP_SPRETEiJ_G0018028) #8	Hcrt (MGP_SPRETEiJ_G0018029) #9	Ghdc (MGP_SPRETEiJ_G0018030) #10	Stat5b (MGP_SPRETEiJ_G0018031) ##12	MGP_SPRETEiJ_G0018032 ##12	Stat3 (MGP_SPRETEiJ_G0018033) #13	Cavin1 (MGP_SPRETEiJ_G0018034) #14	Atp6v0a1 (MGP_SPRETEiJ_G0018035) #15	Naglu (MGP_SPRETEiJ_G0018036) #16	Hsd17b1 (MGP_SPRETEiJ_G0018037) #17	Coasy (MGP_SPRETEiJ_G0018038) #18	Mlx (MGP_SPRETEiJ_G0018039) #19	Psmc3ip (MGP_SPRETEiJ_G0018040) #20	Retreg3 (MGP_SPRETEiJ_G0018041) #21	MGP_SPRETEiJ_G0018042 #22	MGP_SPRETEiJ_G0018043 #23	Plekhh3 (MGP_SPRETEiJ_G0018044) #24	Cntnap1 (MGP_SPRETEiJ_G0018045) #26	Ccr10 (MGP_SPRETEiJ_G0018046) #25	Ezh1 (MGP_SPRETEiJ_G0018047) #27	Ramp2 (MGP_SPRETEiJ_G0018048) #28	Vps25 (MGP_SPRETEiJ_G0018049) #29	Wnk4 (MGP_SPRETEiJ_G0018050) #30	Coa3 (MGP_SPRETEiJ_G0018051) #31	Cntd1 (MGP_SPRETEiJ_G0018052) #32	Becn1 (MGP_SPRETEiJ_G0018053) #33	Psme3 (MGP_SPRETEiJ_G0018054) #34	Aoc2 (MGP_SPRETEiJ_G0018055) ##35	Aoc3 (MGP_SPRETEiJ_G0018056) #35	G6pc (MGP_SPRETEiJ_G0018057) #36
Mouse	MODERN SPECIES	2	Rab5c (ENSMUSG00000019173) #7	Kcnh4 (ENSMUSG00000035355) #8	Hcrt (ENSMUSG00000045471) #9	Ghdc (ENSMUSG00000017747) #10	Stat5b (ENSMUSG00000020919) ##12	Stat5a (ENSMUSG00000004043) ##12	Stat3 (ENSMUSG00000004040) #13	Cavin1 (ENSMUSG00000004044) #14	Atp6v0a1 (ENSMUSG00000019302) #15	Naglu (ENSMUSG00000001751) #16	Hsd17b1 (ENSMUSG00000019301) #17	Coasy (ENSMUSG00000001755) #18	Mlx (ENSMUSG00000017801) #19	Psmc3ip (ENSMUSG00000019303) #20	Retreg3 (ENSMUSG00000017802) #21	Tubg1 (ENSMUSG00000035198) #22	Tubg2 (ENSMUSG00000045007) #23	Plekhh3 (ENSMUSG00000035172) #24	Cntnap1 (ENSMUSG00000017167) #26	Ccr10 (ENSMUSG00000044052) #25	Ezh1 (ENSMUSG00000006920) #27	Ramp2 (ENSMUSG00000001240) #28	Vps25 (ENSMUSG00000078656) #29	Wnk4 (ENSMUSG00000035112) #30	Coa3 (ENSMUSG00000017188) #31	Cntd1 (ENSMUSG00000078653) #32	Becn1 (ENSMUSG00000035086) #33	Psme3 (ENSMUSG00000078652) #34	Aoc2 (ENSMUSG00000078651) ##35	Aoc3 (ENSMUSG00000019326) #35	G6pc (ENSMUSG00000078650) #36
Ryukyu mouse	MODERN SPECIES	2	Rab5c (MGP_CAROLIEiJ_G0017184) #7	Kcnh4 (MGP_CAROLIEiJ_G0017185) #8	Hcrt (MGP_CAROLIEiJ_G0017186) #9	Ghdc (MGP_CAROLIEiJ_G0017187) #10	Stat5b (MGP_CAROLIEiJ_G0017188) ##12	Stat5a (MGP_CAROLIEiJ_G0017189) ##12	Stat3 (MGP_CAROLIEiJ_G0017190) #13	Cavin1 (MGP_CAROLIEiJ_G0017191) #14	Atp6v0a1 (MGP_CAROLIEiJ_G0017192) #15	Naglu (MGP_CAROLIEiJ_G0017193) #16	Hsd17b1 (MGP_CAROLIEiJ_G0017194) #17	Coasy (MGP_CAROLIEiJ_G0017195) #18	Mlx (MGP_CAROLIEiJ_G0017196) #19	Psmc3ip (MGP_CAROLIEiJ_G0017197) #20	Retreg3 (MGP_CAROLIEiJ_G0017198) #21	Tubg1 (MGP_CAROLIEiJ_G0017199) #22	Tubg2 (MGP_CAROLIEiJ_G0017200) #23	Plekhh3 (MGP_CAROLIEiJ_G0017201) #24	Cntnap1 (MGP_CAROLIEiJ_G0017202) #26	Ccr10 (MGP_CAROLIEiJ_G0017203) #25	Ezh1 (MGP_CAROLIEiJ_G0017204) #27	Ramp2 (MGP_CAROLIEiJ_G0017205) #28	Vps25 (MGP_CAROLIEiJ_G0017206) #29	Wnk4 (MGP_CAROLIEiJ_G0017207) #30	Coa3 (MGP_CAROLIEiJ_G0017208) #31	Cntd1 (MGP_CAROLIEiJ_G0017209) #32	Becn1 (MGP_CAROLIEiJ_G0017210) #33	Psme3 (MGP_CAROLIEiJ_G0017211) #34	Aoc2 (MGP_CAROLIEiJ_G0017212) ##35	Aoc3 (MGP_CAROLIEiJ_G0017213) #35	G6pc (MGP_CAROLIEiJ_G0017214) #36
Shrew mouse	MODERN SPECIES	5	Rab5c (MGP_PahariEiJ_G0018314) #7	Kcnh4 (MGP_PahariEiJ_G0018315) #8	Hcrt (MGP_PahariEiJ_G0018316) #9	Ghdc (MGP_PahariEiJ_G0018317) #10	Stat5b (MGP_PahariEiJ_G0018318) ##12	MGP_PahariEiJ_G0018319 ##12	Stat3 (MGP_PahariEiJ_G0018320) #13	Cavin1 (MGP_PahariEiJ_G0018321) #14	Atp6v0a1 (MGP_PahariEiJ_G0018322) #15	Naglu (MGP_PahariEiJ_G0018323) #16	Hsd17b1 (MGP_PahariEiJ_G0018324) #17	Coasy (MGP_PahariEiJ_G0018325) #18	MGP_PahariEiJ_G0018326 #19	Psmc3ip (MGP_PahariEiJ_G0018327) #20	Retreg3 (MGP_PahariEiJ_G0018328) #21	Tubg1 (MGP_PahariEiJ_G0018329) #22	Tubg2 (MGP_PahariEiJ_G0018330) #23	Plekhh3 (MGP_PahariEiJ_G0018331) #24	Cntnap1 (MGP_PahariEiJ_G0018332) #26	Ccr10 (MGP_PahariEiJ_G0018333) #25	Ezh1 (MGP_PahariEiJ_G0018334) #27	Ramp2 (MGP_PahariEiJ_G0018335) #28	Vps25 (MGP_PahariEiJ_G0018336) #29	Wnk4 (MGP_PahariEiJ_G0018337) #30	Coa3 (MGP_PahariEiJ_G0018338) #31	Cntd1 (MGP_PahariEiJ_G0018339) #32	Becn1 (MGP_PahariEiJ_G0018340) #33	Psme3 (MGP_PahariEiJ_G0018341) #34	Aoc2 (MGP_PahariEiJ_G0018342) ##35	Aoc3 (MGP_PahariEiJ_G0018343) #35	G6pc (MGP_PahariEiJ_G0018344) #36
Rat	MODERN SPECIES	1	Rab5c (ENSRNOG00000018568) #7	Kcnh4 (ENSRNOG00000018790) #8	Hcrt (ENSRNOG00000018892) #9	Ghdc (ENSRNOG00000018906) #10	Stat5b (ENSRNOG00000019075) ##12	Stat5a (ENSRNOG00000019496) ##12	Stat3 (ENSRNOG00000019742) #13	Cavin1 (ENSRNOG00000019778) #14	Atp6v0a1 (ENSRNOG00000036814) #15	Naglu (ENSRNOG00000032381) #16	Hsd17b1 (ENSRNOG00000019830) #17	Coasy (ENSRNOG00000019918) #18	Mlx (ENSRNOG00000019983) #19	Psmc3ip (ENSRNOG00000020022) #20	Retreg3 (ENSRNOG00000020056) #21	Tubg1 (ENSRNOG00000020213) #22	Tubg2 (ENSRNOG00000006494) #23	Plekhh3 (ENSRNOG00000020238) #24	Ccr10 (ENSRNOG00000020275) #25	Cntnap1 (ENSRNOG00000020277) #26	Ezh1 (ENSRNOG00000020336) #27	Vps25 (ENSRNOG00000020441) #30	Atp5mk-ps2 (ENSRNOG00000067471)	Coa3 (ENSRNOG00000020487) #31	Becn1 (ENSRNOG00000020513) #33	G6pc1 (ENSRNOG00000053448) #35	Aarsd1 (ENSRNOG00000020658) #37	Ptges3l (ENSRNOG00000050347)	Rundc1 (ENSRNOG00000023768)	Rpl27 (ENSRNOG00000020674)	Ifi35 (ENSRNOG00000020678)
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	Kcnh4 (ENSNGAG00000012447) #8	Hcrt (ENSNGAG00000017222) #9	Ghdc (ENSNGAG00000019995) #10	Stat5b (ENSNGAG00000008411) ##12	ENSNGAG00000016189	Stat5a (ENSNGAG00000017098) ##12	Stat3 (ENSNGAG00000002384) #13	Cavin1 (ENSNGAG00000016373) #14	Atp6v0a1 (ENSNGAG00000019015) #15	Naglu (ENSNGAG00000001778) #16	Hsd17b1 (ENSNGAG00000011336) #17	Coasy (ENSNGAG00000011553) #18	Mlx (ENSNGAG00000011307) #19	Psmc3ip (ENSNGAG00000014927) #20	Retreg3 (ENSNGAG00000014675) #21	Tubg1 (ENSNGAG00000014805) #22	Tubg2 (ENSNGAG00000004427) #23	Plekhh3 (ENSNGAG00000020821) #24	Ccr10 (ENSNGAG00000020372) #25	Cntnap1 (ENSNGAG00000009133) #26	Ezh1 (ENSNGAG00000012173) #27	Ramp2 (ENSNGAG00000016874) #28	Vps25 (ENSNGAG00000015305) #29	Wnk4 (ENSNGAG00000013456) #30	Coa3 (ENSNGAG00000011157) #31	Cntd1 (ENSNGAG00000013614) #32	Becn1 (ENSNGAG00000002226) #33	Psme3 (ENSNGAG00000005238) #34	Aoc2 (ENSNGAG00000019887) ##35	Aoc3 (ENSNGAG00000012544) #35	G6pc (ENSNGAG00000000379) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	Rab5c (ENSJJAG00000021181) #7	Kcnh4 (ENSJJAG00000021495) #8	Hcrt (ENSJJAG00000021837) #9	Ghdc (ENSJJAG00000023539) #10	Stat5b (ENSJJAG00000021714) ##12	Stat5a (ENSJJAG00000020911) ##12	Stat3 (ENSJJAG00000023580) #13	Cavin1 (ENSJJAG00000020868) #14	Atp6v0a1 (ENSJJAG00000023112) #15	Naglu (ENSJJAG00000020839) #16	Hsd17b1 (ENSJJAG00000020824) #17	Coasy (ENSJJAG00000021057) #18	Mlx (ENSJJAG00000021305) #19	ENSJJAG00000021293 #20	Retreg3 (ENSJJAG00000021144) #21	Tubg1 (ENSJJAG00000020643) #22	Tubg2 (ENSJJAG00000022182) #23	Plekhh3 (ENSJJAG00000021329) #24	Ccr10 (ENSJJAG00000021031) #25	Cntnap1 (ENSJJAG00000003810) #26	Ezh1 (ENSJJAG00000020580) #27	ENSJJAG00000021892 #28	Vps25 (ENSJJAG00000001505) #29	Wnk4 (ENSJJAG00000021799) #30	Coa3 (ENSJJAG00000020968) #31	Cntd1 (ENSJJAG00000019888) #32	Becn1 (ENSJJAG00000021753) #33	ENSJJAG00000020691 #34	Aoc2 (ENSJJAG00000020667) ##35	Aoc3 (ENSJJAG00000018905) #35	G6pc (ENSJJAG00000019877) #36
Kangaroo rat	MODERN SPECIES	326	Kcnh4 (ENSDORG00000002370) #8	Hcrt (ENSDORG00000027929) #9	ENSDORG00000002375	ENSDORG00000002376 ##12	Stat5a (ENSDORG00000000303) ##12	Stat3 (ENSDORG00000000308) #13	Cavin1 (ENSDORG00000024770) #14	ENSDORG00000028466 ##15	Atp6v0a1 (ENSDORG00000013402) #15	Naglu (ENSDORG00000006547) #16	Hsd17b1 (ENSDORG00000006544) #17	Coasy (ENSDORG00000006542) #18	Mlx (ENSDORG00000006540) #19	Psmc3ip (ENSDORG00000006537) #20	Retreg3 (ENSDORG00000006535) #21	Tubg1 (ENSDORG00000006534) #22	Plekhh3 (ENSDORG00000016401) #24	Ccr10 (ENSDORG00000016402) #25	Cntnap1 (ENSDORG00000016403) #26	Ezh1 (ENSDORG00000016404) #27	ENSDORG00000027443 #28	ENSDORG00000000950 #29	Wnk4 (ENSDORG00000000951) #30	Coa3 (ENSDORG00000000953) #31	Cntd1 (ENSDORG00000000954) #32	Becn1 (ENSDORG00000000956) #33	Psme3 (ENSDORG00000000958) #34	Aoc3 (ENSDORG00000000961) #35	G6pc (ENSDORG00000014392) #36
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Pika	MODERN SPECIES	2523												ENSOPRG00000012312 #18	MLX (ENSOPRG00000012322) #19	PSMC3IP (ENSOPRG00000012331) #20	RETREG3 (ENSOPRG00000012339) #21	ENSOPRG00000012349 #22
Rabbit	MODERN SPECIES	10	RAB5C (ENSOCUG00000013307) #7	KCNH4 (ENSOCUG00000013312) #8	HCRT (ENSOCUG00000013324) #9	GHDC (ENSOCUG00000026428) #10	STAT5B (ENSOCUG00000005078) ##12	STAT5A (ENSOCUG00000023066) ##12	STAT3 (ENSOCUG00000011034) #13	ENSOCUG00000026764 #14	ATP6V0A1 (ENSOCUG00000015169) #15	NAGLU (ENSOCUG00000000581) #16	ENSOCUG00000022009 #17	COASY (ENSOCUG00000015195) #18	MLX (ENSOCUG00000015210) #19	PSMC3IP (ENSOCUG00000015214) #20	RETREG3 (ENSOCUG00000015226) #21	TUBG1 (ENSOCUG00000015260) #22	PLEKHH3 (ENSOCUG00000021704) #24	CCR10 (ENSOCUG00000023791) #25	CNTNAP1 (ENSOCUG00000007327) #26	EZH1 (ENSOCUG00000006045) #27	RAMP2 (ENSOCUG00000023670) #28	VPS25 (ENSOCUG00000034593) #29	WNK4 (ENSOCUG00000015928) #30	COA3 (ENSOCUG00000015948) #31	CNTD1 (ENSOCUG00000037401) #32	ENSOCUG00000015964 #33	PSME3 (ENSOCUG00000015986) #34	AOC2 (ENSOCUG00000015997) ##35	AOC3 (ENSOCUG00000033151) #35	G6PC1 (ENSOCUG00000016018) #36	AARSD1 (ENSOCUG00000009259) #37
Tree shrew	MODERN SPECIES	8663																TUBG1 (ENSTBEG00000015835) #22
Primates	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000154971.a.a #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.c #35	ENSGT00950000183207.b.e.d #35
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000154971.a.a #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.c #35	ENSGT00950000183207.b.e.d #35
Coquerels sifaka	MODERN SPECIES	672	ENSPCOG00000026327 #7	KCNH4 (ENSPCOG00000014654) #8	HCRT (ENSPCOG00000014217) #9	GHDC (ENSPCOG00000013893) #10	STAT5B (ENSPCOG00000024946) ##12	STAT5A (ENSPCOG00000023163) ##12	STAT3 (ENSPCOG00000027850) #13	CAVIN1 (ENSPCOG00000021159) #14	ATP6V0A1 (ENSPCOG00000011134) #15	NAGLU (ENSPCOG00000026129) #16	HSD17B1 (ENSPCOG00000025503) #17	ENSPCOG00000019461 #18	MLX (ENSPCOG00000015394) #19	PSMC3IP (ENSPCOG00000007051) #20	RETREG3 (ENSPCOG00000024623) #21	TUBG1 (ENSPCOG00000022279) #22	TUBG2 (ENSPCOG00000026674) #23	PLEKHH3 (ENSPCOG00000016889) #24	CCR10 (ENSPCOG00000016970) #25	CNTNAP1 (ENSPCOG00000007810) #26	EZH1 (ENSPCOG00000024585) #27	RAMP2 (ENSPCOG00000021480) #28	VPS25 (ENSPCOG00000019464) #29	WNK4 (ENSPCOG00000007130) #30	COA3 (ENSPCOG00000013088) #31	CNTD1 (ENSPCOG00000022551) #32	BECN1 (ENSPCOG00000027315) #33	PSME3 (ENSPCOG00000018396) #34	AOC2 (ENSPCOG00000023288) ##35	ENSPCOG00000001852 #35	ENSPCOG00000009608 #35
Mouse lemur	MODERN SPECIES	7	KCNH4 (ENSMICG00000047175) #8	HCRT (ENSMICG00000011976) #9	GHDC (ENSMICG00000011980) #10	STAT5B (ENSMICG00000011988) ##12	STAT5A (ENSMICG00000012005) ##12	STAT3 (ENSMICG00000012015) #13	CAVIN1 (ENSMICG00000034412) #14	ENSMICG00000031037	ATP6V0A1 (ENSMICG00000010226) #15	NAGLU (ENSMICG00000047584) #16	HSD17B1 (ENSMICG00000045470) #17	COASY (ENSMICG00000010251) #18	MLX (ENSMICG00000010258) #19	PSMC3IP (ENSMICG00000010266) #20	RETREG3 (ENSMICG00000046440) #21	TUBG1 (ENSMICG00000047848) #22	TUBG2 (ENSMICG00000044881) #23	PLEKHH3 (ENSMICG00000010298) #24	CCR10 (ENSMICG00000010311) #25	CNTNAP1 (ENSMICG00000010313) #26	EZH1 (ENSMICG00000010327) #27	RAMP2 (ENSMICG00000028500) #28	VPS25 (ENSMICG00000010357) #29	WNK4 (ENSMICG00000010362) #30	COA3 (ENSMICG00000045288) #31	CNTD1 (ENSMICG00000010384) #32	BECN1 (ENSMICG00000010391) #33	PSME3 (ENSMICG00000010398) #34	AOC2 (ENSMICG00000031928) ##35	ENSMICG00000027130 #35	ENSMICG00000046526 #35
Bushbaby	MODERN SPECIES	133	RAB5C (ENSOGAG00000009456) #7	KCNH4 (ENSOGAG00000017197) #8	HCRT (ENSOGAG00000002433) #9	GHDC (ENSOGAG00000002434) #10	STAT5B (ENSOGAG00000017198) ##12	STAT5A (ENSOGAG00000001513) ##12	STAT3 (ENSOGAG00000001517) #13	CAVIN1 (ENSOGAG00000029167) #14	ATP6V0A1 (ENSOGAG00000009857) #15	NAGLU (ENSOGAG00000012198) #16	HSD17B1 (ENSOGAG00000012195) #17	COASY (ENSOGAG00000009863) #18	MLX (ENSOGAG00000009867) #19	PSMC3IP (ENSOGAG00000025433) #20	RETREG3 (ENSOGAG00000009874) #21	TUBG1 (ENSOGAG00000009883) #22	TUBG2 (ENSOGAG00000009878) #23	PLEKHH3 (ENSOGAG00000009889) #24	CCR10 (ENSOGAG00000031984) #25	CNTNAP1 (ENSOGAG00000009895) #26	EZH1 (ENSOGAG00000009904) #27	VPS25 (ENSOGAG00000009911) #29	WNK4 (ENSOGAG00000009916) #30	COA3 (ENSOGAG00000009928) #31	CNTD1 (ENSOGAG00000009929) #32	BECN1 (ENSOGAG00000009933) #33	PSME3 (ENSOGAG00000009420) #34	AOC2 (ENSOGAG00000009425) ##35	ENSOGAG00000013065 #35	ENSOGAG00000028463 #35	G6PC1 (ENSOGAG00000009428) #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Tarsier	MODERN SPECIES	1933									ATP6V0A1 (ENSTSYG00000005183) #15	NAGLU (ENSTSYG00000028598) #16	HSD17B1 (ENSTSYG00000025793) #17	COASY (ENSTSYG00000026514) #18	MLX (ENSTSYG00000007534) #19	PSMC3IP (ENSTSYG00000007620) #20	RETREG3 (ENSTSYG00000007672) #21	TUBG1 (ENSTSYG00000035742) #22
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.i #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.e #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00950000183150.a.a #36
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000154971.c #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.i #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604.k #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a.e #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00950000183150.a.a #36
Cebidae_a	ANCESTRAL SPECIES	69	ENSGT00940000154971.c #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.i #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604.k #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.i #33	ENSGT00950000183098.a.e #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00940000154259.l.c.b.a
Capuchin	DUPLICATION
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	415	RAB5C (ENSCCAG00000025940) #7	KCNH4 (ENSCCAG00000034000) #8	HCRT (ENSCCAG00000020143) #9	GHDC (ENSCCAG00000027794) #10	STAT5B (ENSCCAG00000035457) ##12	STAT5A (ENSCCAG00000024679) ##12	STAT3 (ENSCCAG00000026387) #13	CAVIN1 (ENSCCAG00000026647) #14	ATP6V0A1 (ENSCCAG00000024761) #15	NAGLU (ENSCCAG00000003973) #16	HSD17B1 (ENSCCAG00000027913) #17	COASY (ENSCCAG00000031974) #18	MLX (ENSCCAG00000025082) #19	PSMC3IP (ENSCCAG00000035025) #20	RETREG3 (ENSCCAG00000037046) #21	ENSCCAG00000022100 #22	TUBG2 (ENSCCAG00000035060) #23	PLEKHH3 (ENSCCAG00000028692) #24	CCR10 (ENSCCAG00000028317) #25	CNTNAP1 (ENSCCAG00000027069) #26	EZH1 (ENSCCAG00000030679) #27	RAMP2 (ENSCCAG00000028784) #28	ENSCCAG00000035459 #29	VPS25 (ENSCCAG00000023256) #29	WNK4 (ENSCCAG00000033745) #30	COA3 (ENSCCAG00000032729) #31	CNTD1 (ENSCCAG00000027917) #32	BECN1 (ENSCCAG00000035360) #33	ENSCCAG00000025926 #34	AOC2 (ENSCCAG00000008067) ##35	AOC3 (ENSCCAG00000032694) #35
Capuchin	MODERN SPECIES	282														NR0B1 (ENSCCAG00000032350)	IL1RAPL1 (ENSCCAG00000026068)	ENSCCAG00000031811 #22	ENSCCAG00000020805	ENSCCAG00000025117	DCAF8L1 (ENSCCAG00000024695)	ENSCCAG00000025352
Capuchin	MODERN SPECIES	39	CSRP3 (ENSCCAG00000037898)	ZDHHC13 (ENSCCAG00000031657)	PTPN5 (ENSCCAG00000031767)	IGSF22 (ENSCCAG00000015473)	TMEM86A (ENSCCAG00000022653)	ENSCCAG00000030365	ENSCCAG00000036425	ENSCCAG00000037680	UEVLD (ENSCCAG00000036814)	ENSCCAG00000033011	TSG101 (ENSCCAG00000036169)	ENSCCAG00000020722	LDHAL6A (ENSCCAG00000031041)	LDHC (ENSCCAG00000031200)	ENSCCAG00000029060	ENSCCAG00000028937 #22	GTF2H1 (ENSCCAG00000028407)	HPS5 (ENSCCAG00000032081)	ENSCCAG00000024577	ENSCCAG00000024041	SAA4 (ENSCCAG00000025050)	ENSCCAG00000022385	SAAL1 (ENSCCAG00000025101)	TPH1 (ENSCCAG00000023915)	SERGEF (ENSCCAG00000037352)	KCNC1 (ENSCCAG00000033090)	MYOD1 (ENSCCAG00000036433)	OTOG (ENSCCAG00000027583)	USH1C (ENSCCAG00000030798)	ABCC8 (ENSCCAG00000029653)	KCNJ11 (ENSCCAG00000019232)
Bolivian squirrel monkey	MODERN SPECIES	208	ENSSBOG00000032552 #7	KCNH4 (ENSSBOG00000033701) #8	HCRT (ENSSBOG00000019042) #9	GHDC (ENSSBOG00000021411) #10	STAT5B (ENSSBOG00000012375) ##12	ENSSBOG00000028018 ##12	STAT3 (ENSSBOG00000035000) #13	CAVIN1 (ENSSBOG00000030548) #14	ENSSBOG00000033421	ATP6V0A1 (ENSSBOG00000033048) #15	NAGLU (ENSSBOG00000011806) #16	HSD17B1 (ENSSBOG00000034608) #17	COASY (ENSSBOG00000033931) #18	MLX (ENSSBOG00000025119) #19	PSMC3IP (ENSSBOG00000035416) #20	TUBG1 (ENSSBOG00000033379) #22	RETREG3 (ENSSBOG00000026263) #21	TUBG2 (ENSSBOG00000031124) #23	PLEKHH3 (ENSSBOG00000033476) #24	CCR10 (ENSSBOG00000024290) #25	CNTNAP1 (ENSSBOG00000023244) #26	EZH1 (ENSSBOG00000026195) #27	RAMP2 (ENSSBOG00000030073) #28	VPS25 (ENSSBOG00000035364) #29	COA3 (ENSSBOG00000027470) #31	WNK4 (ENSSBOG00000030076) #30	CNTD1 (ENSSBOG00000000042) #32	ENSSBOG00000021469 #33	PSME3 (ENSSBOG00000024784) #34	AOC2 (ENSSBOG00000027601) ##35	AOC3 (ENSSBOG00000030760) #35
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	734	KCNH4 (ENSANAG00000033256) #8	HCRT (ENSANAG00000035682) #9	GHDC (ENSANAG00000038508) #10	STAT5B (ENSANAG00000037240) ##12	ENSANAG00000021113 ##12	STAT3 (ENSANAG00000035843) #13	CAVIN1 (ENSANAG00000034141) #14	ATP6V0A1 (ENSANAG00000025626) #15	NAGLU (ENSANAG00000036738) #16	ENSANAG00000029773 #17	ENSANAG00000024517 #17	COASY (ENSANAG00000028999) #18	MLX (ENSANAG00000022921) #19	PSMC3IP (ENSANAG00000028427) #20	RETREG3 (ENSANAG00000011628) #21	TUBG1 (ENSANAG00000028328) #22	PLEKHH3 (ENSANAG00000038527) #24	CCR10 (ENSANAG00000027464) #25	CNTNAP1 (ENSANAG00000026845) #26	EZH1 (ENSANAG00000030187) #27	RAMP2 (ENSANAG00000038309) #28	VPS25 (ENSANAG00000038437) #29	WNK4 (ENSANAG00000037047) #30	COA3 (ENSANAG00000026099) #31	CNTD1 (ENSANAG00000027936) #32	BECN1 (ENSANAG00000038411) #33	ENSANAG00000023115 #34	AOC2 (ENSANAG00000033481) ##35	AOC3 (ENSANAG00000020342) #35	ENSANAG00000038070 #35	ENSANAG00000038499
Mas night monkey	MODERN SPECIES	814									ENSANAG00000023417	CBLL2 (ENSANAG00000024818)	PHEX (ENSANAG00000021236)	ENSANAG00000030126	ENSANAG00000032026	SMS (ENSANAG00000031156)	MBTPS2 (ENSANAG00000022738)	ENSANAG00000034743 #22	SMPX (ENSANAG00000035900)	KLHL34 (ENSANAG00000020210)	CNKSR2 (ENSANAG00000030385)	ENSANAG00000019923	ENSANAG00000000067	RPS6KA3 (ENSANAG00000026591)	ENSANAG00000025820	ENSANAG00000030856	MAP7D2 (ENSANAG00000037417)	ENSANAG00000026646	ENSANAG00000034832	ENSANAG00000030233 ##34	MAP3K15 (ENSANAG00000034023)	PDHA1 (ENSANAG00000030855)	ADGRG2 (ENSANAG00000034597)
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000153299.c.b.a.b.b	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000153299.c.b.a.b.b	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34
Rhinopithecus	ANCESTRAL SPECIES	27	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00940000154383.v.a.b	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000153299.c.b.a.b.b	ENSGT00940000155266	ENSGT00390000015476.d.a	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j #31	ENSGT00440000033966 #32
Golden snub-nosed monkey	MODERN SPECIES	744	HCRT (ENSRROG00000042431) #9	GHDC (ENSRROG00000042027) #10	STAT5B (ENSRROG00000030551) ##12	STAT5A (ENSRROG00000006532) ##12	ENSRROG00000036983	STAT3 (ENSRROG00000033200) #13	CAVIN1 (ENSRROG00000000546) #14	ATP6V0A1 (ENSRROG00000034763) #15	ENSRROG00000044031	NAGLU (ENSRROG00000044592) #16	HSD17B1 (ENSRROG00000045649) #17	COASY (ENSRROG00000036039) #18	MLX (ENSRROG00000033886) #19	PSMC3IP (ENSRROG00000033762) #20	RETREG3 (ENSRROG00000029584) #21	TUBG1 (ENSRROG00000039495) #22	ENSRROG00000036431	TUBG2 (ENSRROG00000031570) #23	PLEKHH3 (ENSRROG00000032252) #24	CCR10 (ENSRROG00000033240) #25	CNTNAP1 (ENSRROG00000030589) #26	EZH1 (ENSRROG00000036806) #27	ENSRROG00000028695	RAMP2 (ENSRROG00000044228) #28	VPS25 (ENSRROG00000032886) #29	WNK4 (ENSRROG00000034925) #30	ENSRROG00000032581 #31	CNTD1 (ENSRROG00000039425) #32	BECN1 (ENSRROG00000037620) #33	PSME3 (ENSRROG00000034298) #34	AOC2 (ENSRROG00000023404) ##35
Black snub-nosed monkey	MODERN SPECIES	1860	HCRT (ENSRBIG00000044623) #9	GHDC (ENSRBIG00000032512) #10	STAT5B (ENSRBIG00000032232) ##12	STAT5A (ENSRBIG00000006369) ##12	STAT3 (ENSRBIG00000028053) #13	ENSRBIG00000042412	CAVIN1 (ENSRBIG00000040240) #14	ATP6V0A1 (ENSRBIG00000037947) #15	ENSRBIG00000026989	NAGLU (ENSRBIG00000041090) #16	HSD17B1 (ENSRBIG00000030971) #17	COASY (ENSRBIG00000037761) #18	MLX (ENSRBIG00000035331) #19	PSMC3IP (ENSRBIG00000035379) #20	RETREG3 (ENSRBIG00000029555) #21	TUBG1 (ENSRBIG00000031186) #22	ENSRBIG00000042351	TUBG2 (ENSRBIG00000038504) #23	PLEKHH3 (ENSRBIG00000033539) #24	CCR10 (ENSRBIG00000036566) #25	ENSRBIG00000029924	CNTNAP1 (ENSRBIG00000034900) #26
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00940000154383.v.a.b.d	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35
Vervet Monkey	MODERN SPECIES	7	KCNH4 (ENSCSAG00000003119) #8	HCRT (ENSCSAG00000003125) #9	GHDC (ENSCSAG00000003129) #10	STAT5B (ENSCSAG00000003133) ##12	STAT5A (ENSCSAG00000003196) ##12	STAT3 (ENSCSAG00000003215) #13	CAVIN1 (ENSCSAG00000003217) #14	ATP6V0A1 (ENSCSAG00000003223) #15	ENSCSAG00000003226	NAGLU (ENSCSAG00000003229) #16	HSD17B1 (ENSCSAG00000003232) #17	COASY (ENSCSAG00000003236) #18	MLX (ENSCSAG00000003241) #19	PSMC3IP (ENSCSAG00000003258) #20	RETREG3 (ENSCSAG00000003264) #21	TUBG1 (ENSCSAG00000003279) #22	TUBG2 (ENSCSAG00000003304) #23	PLEKHH3 (ENSCSAG00000003311) #24	CCR10 (ENSCSAG00000003317) #25	CNTNAP1 (ENSCSAG00000003325) #26	EZH1 (ENSCSAG00000003330) #27	RAMP2 (ENSCSAG00000003335) #28	VPS25 (ENSCSAG00000003337) #29	ENSCSAG00000003340 #30	ENSCSAG00000003343 #32	BECN1 (ENSCSAG00000003347) #33	PSME3 (ENSCSAG00000003352) #34	AOC2 (ENSCSAG00000003354) ##35	AOC3 (ENSCSAG00000003361) #35	ENSCSAG00000003367 #35	G6PC1 (ENSCSAG00000003371) #36
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00940000154383.v.b.a	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35
Pig-tailed macaque	MODERN SPECIES	494	HCRT (ENSMNEG00000036772) #9	GHDC (ENSMNEG00000031751) #10	STAT5B (ENSMNEG00000032104) ##12	STAT5A (ENSMNEG00000032423) ##12	ENSMNEG00000030749	STAT3 (ENSMNEG00000033376) #13	CAVIN1 (ENSMNEG00000044035) #14	ATP6V0A1 (ENSMNEG00000031844) #15	ENSMNEG00000044012	NAGLU (ENSMNEG00000038683) #16	HSD17B1 (ENSMNEG00000036285) #17	COASY (ENSMNEG00000042598) #18	MLX (ENSMNEG00000029431) #19	PSMC3IP (ENSMNEG00000037579) #20	RETREG3 (ENSMNEG00000032929) #21	TUBG1 (ENSMNEG00000004340) #22	TUBG2 (ENSMNEG00000040353) #23	PLEKHH3 (ENSMNEG00000031058) #24	CCR10 (ENSMNEG00000040961) #25	ENSMNEG00000029871	CNTNAP1 (ENSMNEG00000031126) #26	EZH1 (ENSMNEG00000043174) #27	RAMP2 (ENSMNEG00000033822) #28	VPS25 (ENSMNEG00000035735) #29	WNK4 (ENSMNEG00000045494) #30	ENSMNEG00000043888 #31	CNTD1 (ENSMNEG00000001170) #32	BECN1 (ENSMNEG00000031367) #33	PSME3 (ENSMNEG00000003232) #34	AOC2 (ENSMNEG00000035188) ##35	AOC3 (ENSMNEG00000022911) #35
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00940000154383.v.b.a	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00950000183150.a.a #36
Crab-eating macaque	MODERN SPECIES	7	KCNH4 (ENSMFAG00000003215) #8	HCRT (ENSMFAG00000052935) #9	GHDC (ENSMFAG00000001371) #10	STAT5B (ENSMFAG00000032361) ##12	STAT5A (ENSMFAG00000020904) ##12	STAT3 (ENSMFAG00000040992) #13	ENSMFAG00000052768 #14	ATP6V0A1 (ENSMFAG00000009940) #15	ENSMFAG00000037626	NAGLU (ENSMFAG00000039206) #16	HSD17B1 (ENSMFAG00000030629) #17	COASY (ENSMFAG00000003964) #18	MLX (ENSMFAG00000045041) #19	PSMC3IP (ENSMFAG00000044078) #20	RETREG3 (ENSMFAG00000031382) #21	TUBG1 (ENSMFAG00000002868) #22	TUBG2 (ENSMFAG00000001256) #23	CCR10 (ENSMFAG00000000870) #25	CNTNAP1 (ENSMFAG00000046099) #26	EZH1 (ENSMFAG00000032160) #27	RAMP2 (ENSMFAG00000039009) #28	VPS25 (ENSMFAG00000062659) #29	ENSMFAG00000000864 #30	COA3 (ENSMFAG00000045541) #31	CNTD1 (ENSMFAG00000040185) #32	BECN1 (ENSMFAG00000032400) #33	ENSMFAG00000060694	PSME3 (ENSMFAG00000046232) #34	AOC2 (ENSMFAG00000038881) ##35	AOC3 (ENSMFAG00000048619) #35	G6PC1 (ENSMFAG00000000344) #36
Rhesus	MODERN SPECIES	7	KCNH4 (ENSMMUG00000006401) #8	HCRT (ENSMMUG00000006406) #9	GHDC (ENSMMUG00000006407) #10	STAT5B (ENSMMUG00000003437) ##12	STAT5A (ENSMMUG00000010705) ##12	ENSMMUG00000052220	STAT3 (ENSMMUG00000010707) #13	CAVIN1 (ENSMMUG00000050192) #14	ATP6V0A1 (ENSMMUG00000022644) #15	NAGLU (ENSMMUG00000050793) #16	HSD17B1 (ENSMMUG00000009884) #17	COASY (ENSMMUG00000009886) #18	MLX (ENSMMUG00000009887) #19	PSMC3IP (ENSMMUG00000009889) #20	RETREG3 (ENSMMUG00000016796) #21	TUBG1 (ENSMMUG00000016797) #22	PLEKHH3 (ENSMMUG00000006086) #24	CCR10 (ENSMMUG00000006090) #25	CNTNAP1 (ENSMMUG00000006091) #26	EZH1 (ENSMMUG00000006093) #27	RAMP2 (ENSMMUG00000002150) #28	VPS25 (ENSMMUG00000002149) #29	WNK4 (ENSMMUG00000016616) #30	ENSMMUG00000059988 #31	CNTD1 (ENSMMUG00000012641) #32	BECN1 (ENSMMUG00000029971) #33	PSME3 (ENSMMUG00000012685) #34	AOC2 (ENSMMUG00000001870) ##35	ENSMMUG00000046135 #35	ENSMMUG00000057458	G6PC1 (ENSMMUG00000008087) #36
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00950000183207.b.e.b #35
Olive baboon	MODERN SPECIES	8	RAB5C (ENSPANG00000021454) #7	KCNH4 (ENSPANG00000021455) #8	HCRT (ENSPANG00000021456) #9	GHDC (ENSPANG00000021458) #10	STAT5B (ENSPANG00000021460) ##12	STAT5A (ENSPANG00000021452) ##12	STAT3 (ENSPANG00000021451) #13	CAVIN1 (ENSPANG00000021447) #14	ATP6V0A1 (ENSPANG00000021448) #15	NAGLU (ENSPANG00000021445) #16	HSD17B1 (ENSPANG00000021444) #17	COASY (ENSPANG00000021415) #18	MLX (ENSPANG00000021416) #19	PSMC3IP (ENSPANG00000021418) #20	RETREG3 (ENSPANG00000021419) #21	TUBG1 (ENSPANG00000021420) #22	TUBG2 (ENSPANG00000021422) #23	PLEKHH3 (ENSPANG00000021424) #24	CCR10 (ENSPANG00000021425) #25	CNTNAP1 (ENSPANG00000021426) #26	EZH1 (ENSPANG00000021428) #27	RAMP2 (ENSPANG00000035532) #28	VPS25 (ENSPANG00000021414) #29	WNK4 (ENSPANG00000021413) #30	ENSPANG00000030691 #31	CNTD1 (ENSPANG00000021411) #32	BECN1 (ENSPANG00000021410) #33	PSME3 (ENSPANG00000021374) #34	AOC2 (ENSPANG00000021375) ##35	AOC3 (ENSPANG00000021377) #35	G6PC1 (ENSPANG00000021378) #36
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.j.b #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.a #35	ENSGT00950000183207.b.e.b #35
Drill	MODERN SPECIES	1283	RAB5C (ENSMLEG00000036322) #7	KCNH4 (ENSMLEG00000011822) #8	GHDC (ENSMLEG00000044001) #10	STAT5B (ENSMLEG00000043637) ##12	STAT5A (ENSMLEG00000030586) ##12	ENSMLEG00000034501	STAT3 (ENSMLEG00000030447) #13	CAVIN1 (ENSMLEG00000042027) #14	ATP6V0A1 (ENSMLEG00000029939) #15	NAGLU (ENSMLEG00000038482) #16	HSD17B1 (ENSMLEG00000038299) #17	COASY (ENSMLEG00000036787) #18	MLX (ENSMLEG00000004812) #19	PSMC3IP (ENSMLEG00000034388) #20	RETREG3 (ENSMLEG00000008179) #21	TUBG1 (ENSMLEG00000034851) #22	TUBG2 (ENSMLEG00000036092) #23	PLEKHH3 (ENSMLEG00000037744) #24	CCR10 (ENSMLEG00000001845) #25	CNTNAP1 (ENSMLEG00000031915) #26	EZH1 (ENSMLEG00000038086) #27	RAMP2 (ENSMLEG00000037831) #28	VPS25 (ENSMLEG00000038390) #29	WNK4 (ENSMLEG00000043136) #30	COA3 (ENSMLEG00000036336) #31	CNTD1 (ENSMLEG00000028693) #32	BECN1 (ENSMLEG00000044468) #33	PSME3 (ENSMLEG00000010594) #34	AOC2 (ENSMLEG00000038844) ##35	AOC3 (ENSMLEG00000040484) #35	ENSMLEG00000029598 #35
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	564	KCNH4 (ENSCATG00000044311) #8	HCRT (ENSCATG00000044714) #9	GHDC (ENSCATG00000044769) #10	STAT5B (ENSCATG00000009430) ##12	STAT5A (ENSCATG00000039031) ##12	ENSCATG00000009798	STAT3 (ENSCATG00000032273) #13	CAVIN1 (ENSCATG00000003400) #14	ATP6V0A1 (ENSCATG00000031724) #15	NAGLU (ENSCATG00000039094) #16	HSD17B1 (ENSCATG00000029899) #17	COASY (ENSCATG00000036808) #18	MLX (ENSCATG00000019858) #19	PSMC3IP (ENSCATG00000044260) #20	RETREG3 (ENSCATG00000033870) #21	TUBG1 (ENSCATG00000030716) #22	TUBG2 (ENSCATG00000044381) #23	PLEKHH3 (ENSCATG00000034468) #24	CCR10 (ENSCATG00000029721) #25	CNTNAP1 (ENSCATG00000042449) #26	EZH1 (ENSCATG00000033350) #27	RAMP2 (ENSCATG00000030125) #28	VPS25 (ENSCATG00000031146) #29	WNK4 (ENSCATG00000031419) #30	ENSCATG00000030262 #31	CNTD1 (ENSCATG00000033819) #32	BECN1 (ENSCATG00000040669) #33	PSME3 (ENSCATG00000043580) #34	AOC2 (ENSCATG00000042202) ##35	AOC3 (ENSCATG00000044615) #35	G6PC1 (ENSCATG00000005551) #36
Sooty mangabey	MODERN SPECIES	252			INHBA (ENSCATG00000036508)	GLI3 (ENSCATG00000036694)	ENSCATG00000030767	C7orf25 (ENSCATG00000032582)	PSMA2 (ENSCATG00000029633)	MRPL32 (ENSCATG00000038411)	HECW1 (ENSCATG00000043550)	ENSCATG00000020670	STK17A (ENSCATG00000033831)	COA1 (ENSCATG00000044042)	BLVRA (ENSCATG00000043396)	MRPS24 (ENSCATG00000033132)	URGCP (ENSCATG00000031265)	ENSCATG00000031150 #22	UBE2D4 (ENSCATG00000030978)	ENSCATG00000021056	DBNL (ENSCATG00000029728)	PGAM2 (ENSCATG00000024470)	POLM (ENSCATG00000019986)	ENSCATG00000045184	POLD2 (ENSCATG00000040619)	GCK (ENSCATG00000038208)	YKT6 (ENSCATG00000037272)	CAMK2B (ENSCATG00000033919)	NUDCD3 (ENSCATG00000033255)	NPC1L1 (ENSCATG00000034769)	DDX56 (ENSCATG00000039389)	TMED4 (ENSCATG00000036933)	OGDH (ENSCATG00000043101)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT00910000147258	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.h #17	ENSGT00940000160415.g #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000166004	ENSGT00940000165473.a.a	ENSGT00940000154665.h.b	ENSGT00390000014547.d.a.a	ENSGT00940000153299.c.b.a.b.b	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.h #17	ENSGT00940000160415.g #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.h #17	ENSGT00940000160415.g #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.h #17	ENSGT00940000160415.g #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35
Pan	ANCESTRAL SPECIES	3	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415.h #17	ENSGT00940000160415.g #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00900000143602	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000018423.b.a.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35
Chimpanzee	MODERN SPECIES	8	RAB5C (ENSPTRG00000009194) #7	KCNH4 (ENSPTRG00000009195) #8	HCRT (ENSPTRG00000009196) #9	GHDC (ENSPTRG00000009197) #10	STAT5B (ENSPTRG00000009198) ##12	STAT5A (ENSPTRG00000009199) ##12	STAT3 (ENSPTRG00000009200) #13	CAVIN1 (ENSPTRG00000040069) #14	ATP6V0A1 (ENSPTRG00000009202) #15	NAGLU (ENSPTRG00000009203) #16	ENSPTRG00000009204 #17	COASY (ENSPTRG00000009207) #18	MLX (ENSPTRG00000009208) #19	PSMC3IP (ENSPTRG00000009209) #20	RETREG3 (ENSPTRG00000009210) #21	TUBG1 (ENSPTRG00000009211) #22	TUBG2 (ENSPTRG00000009213) #23	PLEKHH3 (ENSPTRG00000009214) #24	CCR10 (ENSPTRG00000009215) #25	CNTNAP1 (ENSPTRG00000009216) #26	EZH1 (ENSPTRG00000009217) #27	ENSPTRG00000044204	RAMP2 (ENSPTRG00000009219) #28	VPS25 (ENSPTRG00000009220) #29	WNK4 (ENSPTRG00000009221) #30	COA3 (ENSPTRG00000009222) #31	CNTD1 (ENSPTRG00000009223) #32	BECN1 (ENSPTRG00000022819) #33	PSME3 (ENSPTRG00000009225) #34	AOC2 (ENSPTRG00000009226) ##35	AOC3 (ENSPTRG00000030952) #35
Bonobo	MODERN SPECIES	8	KCNH4 (ENSPPAG00000036276) #8	HCRT (ENSPPAG00000029937) #9	GHDC (ENSPPAG00000024056) #10	STAT5B (ENSPPAG00000039557) ##12	STAT5A (ENSPPAG00000042087) ##12	STAT3 (ENSPPAG00000040541) #13	CAVIN1 (ENSPPAG00000034760) #14	ATP6V0A1 (ENSPPAG00000034654) #15	NAGLU (ENSPPAG00000027189) #16	ENSPPAG00000034980 #17	HSD17B1 (ENSPPAG00000042092) #17	COASY (ENSPPAG00000039953) #18	MLX (ENSPPAG00000037977) #19	PSMC3IP (ENSPPAG00000029924) #20	RETREG3 (ENSPPAG00000042854) #21	TUBG1 (ENSPPAG00000028905) #22	TUBG2 (ENSPPAG00000038192) #23	PLEKHH3 (ENSPPAG00000027950) #24	CCR10 (ENSPPAG00000035651) #25	ENSPPAG00000033184	CNTNAP1 (ENSPPAG00000030181) #26	EZH1 (ENSPPAG00000039453) #27	ENSPPAG00000042544	RAMP2 (ENSPPAG00000038060) #28	VPS25 (ENSPPAG00000033993) #29	WNK4 (ENSPPAG00000041116) #30	COA3 (ENSPPAG00000039760) #31	CNTD1 (ENSPPAG00000034086) #32	BECN1 (ENSPPAG00000037995) #33	PSME3 (ENSPPAG00000043945) #34	AOC2 (ENSPPAG00000043842) ##35
Human	MODERN SPECIES	8	RAB5C (ENSG00000108774) #7	KCNH4 (ENSG00000089558) #8	HCRT (ENSG00000161610) #9	GHDC (ENSG00000167925) #10	STAT5B (ENSG00000173757) ##12	STAT5A (ENSG00000126561) ##12	STAT3 (ENSG00000168610) #13	CAVIN1 (ENSG00000177469) #14	ATP6V0A1 (ENSG00000033627) #15	NAGLU (ENSG00000108784) #16	HSD17B1 (ENSG00000108786) #17	COASY (ENSG00000068120) #18	MLX (ENSG00000108788) #19	PSMC3IP (ENSG00000131470) #20	RETREG3 (ENSG00000141699) #21	TUBG1 (ENSG00000131462) #22	TUBG2 (ENSG00000037042) #23	PLEKHH3 (ENSG00000068137) #24	CCR10 (ENSG00000184451) #25	CNTNAP1 (ENSG00000108797) #26	EZH1 (ENSG00000108799) #27	RAMP2 (ENSG00000131477) #28	VPS25 (ENSG00000131475) #29	WNK4 (ENSG00000126562) #30	COA3 (ENSG00000183978) #31	CNTD1 (ENSG00000176563) #32	BECN1 (ENSG00000126581) #33	PSME3 (ENSG00000131467) #34	AOC2 (ENSG00000131480) ##35	AOC3 (ENSG00000131471) #35	G6PC1 (ENSG00000131482) #36
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	106	GHDC (ENSNLEG00000011431) #10	STAT5B (ENSNLEG00000011444) ##12	ENSNLEG00000027072 ##12	ENSNLEG00000029917	STAT3 (ENSNLEG00000011454) #13	ENSNLEG00000035131	CAVIN1 (ENSNLEG00000011531) #14	ATP6V0A1 (ENSNLEG00000011534) #15	ENSNLEG00000033736	NAGLU (ENSNLEG00000011557) #16	HSD17B1 (ENSNLEG00000011561) #17	COASY (ENSNLEG00000011586) #18	ENSNLEG00000011638 #19	ENSNLEG00000011650 #20	RETREG3 (ENSNLEG00000011676) #21	TUBG1 (ENSNLEG00000011686) #22	ENSNLEG00000031985	TUBG2 (ENSNLEG00000032269) #23	ENSNLEG00000011745 #24	CCR10 (ENSNLEG00000011750) #25	ENSNLEG00000032229	CNTNAP1 (ENSNLEG00000011756) #26	ENSNLEG00000011781 #27	RAMP2 (ENSNLEG00000011795) #28	VPS25 (ENSNLEG00000011797) #29	WNK4 (ENSNLEG00000011816) #30	COA3 (ENSNLEG00000011824) #31	CNTD1 (ENSNLEG00000011829) #32	BECN1 (ENSNLEG00000011840) #33	PSME3 (ENSNLEG00000011860) #34	ENSNLEG00000030291 ##35
Gibbon	MODERN SPECIES	7	CDK13 (ENSNLEG00000003097)	MPLKIP (ENSNLEG00000028028)	SUGCT (ENSNLEG00000003120)	INHBA (ENSNLEG00000003153)	GLI3 (ENSNLEG00000003160)	C7orf25 (ENSNLEG00000003174)	ENSNLEG00000027384	PSMA2 (ENSNLEG00000003177)	MRPL32 (ENSNLEG00000027404)	HECW1 (ENSNLEG00000003209)	ENSNLEG00000035608	STK17A (ENSNLEG00000003304)	COA1 (ENSNLEG00000003316)	BLVRA (ENSNLEG00000003333)	MRPS24 (ENSNLEG00000033007)	ENSNLEG00000026683 #22	URGCP (ENSNLEG00000003351)	UBE2D4 (ENSNLEG00000003364)	DBNL (ENSNLEG00000003395)	PGAM2 (ENSNLEG00000003550)	ENSNLEG00000003555	ENSNLEG00000003564	POLD2 (ENSNLEG00000003570)	MYL7 (ENSNLEG00000003674)	GCK (ENSNLEG00000028208)	YKT6 (ENSNLEG00000003689)	CAMK2B (ENSNLEG00000003715)	NUDCD3 (ENSNLEG00000003732)	NPC1L1 (ENSNLEG00000003753)	DDX56 (ENSNLEG00000003816)	ENSNLEG00000029010
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Eulipotyphla	ANCESTRAL SPECIES	11					ENSGT01080000257420.C.b.b.b #12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22
Common shrew	MODERN SPECIES	4377												COASY (ENSSARG00000014153) #18	MLX (ENSSARG00000014166) #19	PSMC3IP (ENSSARG00000014179) #20	RETREG3 (ENSSARG00000014186) #21	TUBG1 (ENSSARG00000014189) #22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Microbat	MODERN SPECIES	1037	RAB5C (ENSMLUG00000012028) #7	KCNH4 (ENSMLUG00000012036) #8	HCRT (ENSMLUG00000014840) #9	GHDC (ENSMLUG00000014841) #10	STAT5B (ENSMLUG00000012050) ##12	STAT5A (ENSMLUG00000026308) ##12	STAT3 (ENSMLUG00000017449) #13	CAVIN1 (ENSMLUG00000025515) #14	ATP6V0A1 (ENSMLUG00000016640) #15	NAGLU (ENSMLUG00000027344) #16	HSD17B1 (ENSMLUG00000001029) #17	COASY (ENSMLUG00000016660) #18	MLX (ENSMLUG00000016670) #19	PSMC3IP (ENSMLUG00000016683) #20	RETREG3 (ENSMLUG00000001002) #21	TUBG1 (ENSMLUG00000016694) #22	TUBG2 (ENSMLUG00000007817) #23	PLEKHH3 (ENSMLUG00000007840) #24	CCR10 (ENSMLUG00000024590) #25	CNTNAP1 (ENSMLUG00000004037) #26	EZH1 (ENSMLUG00000004048) #27	RAMP2 (ENSMLUG00000024598) #28	COA3 (ENSMLUG00000004072) #31	WNK4 (ENSMLUG00000004064) #30	BECN1 (ENSMLUG00000004077) #33	PSME3 (ENSMLUG00000004084) #34	AOC2 (ENSMLUG00000004091) ##35	ENSMLUG00000004099 #35	ENSMLUG00000004104 #35	G6PC1 (ENSMLUG00000004107) #36	AARSD1 (ENSMLUG00000024369) #37
Greater horseshoe bat	MODERN SPECIES	13	KCNH4 (ENSRFEG00010007566) #8	HCRT (ENSRFEG00010007598) #9	GHDC (ENSRFEG00010007635) #10	STAT5B (ENSRFEG00010007739) ##12	STAT5A (ENSRFEG00010007816) ##12	STAT3 (ENSRFEG00010007961) #13	CAVIN1 (ENSRFEG00010008079) #14	ATP6V0A1 (ENSRFEG00010008159) #15	ENSRFEG00010008373	NAGLU (ENSRFEG00010008448) #16	HSD17B1 (ENSRFEG00010008541) #17	COASY (ENSRFEG00010008611) #18	MLX (ENSRFEG00010008731) #19	PSMC3IP (ENSRFEG00010008820) #20	RETREG3 (ENSRFEG00010008876) #21	TUBG1 (ENSRFEG00010009005) #22	PLEKHH3 (ENSRFEG00010009248) #24	CCR10 (ENSRFEG00010009309) #25	CNTNAP1 (ENSRFEG00010009359) #26	EZH1 (ENSRFEG00010009456) #27	RAMP2 (ENSRFEG00010009607) #28	ENSRFEG00010009695 #29	WNK4 (ENSRFEG00010009730) #30	COA3 (ENSRFEG00010009767) #31	CNTD1 (ENSRFEG00010009799) #32	BECN1 (ENSRFEG00010009915) #33	PSME3 (ENSRFEG00010010112) #34	AOC2 (ENSRFEG00010010759) ##35	AOC3 (ENSRFEG00010010898) #35	G6PC1 (ENSRFEG00010010983) #36	AARSD1 (ENSRFEG00010011044) #37
Megabat	MODERN SPECIES	357									ATP6V0A1 (ENSPVAG00000016552) #15	NAGLU (ENSPVAG00000016553) #16	HSD17B1 (ENSPVAG00000016554) #17	COASY (ENSPVAG00000016555) #18	MLX (ENSPVAG00000016556) #19	PSMC3IP (ENSPVAG00000016557) #20	RETREG3 (ENSPVAG00000016558) #21	TUBG1 (ENSPVAG00000016559) #22	TUBG2 (ENSPVAG00000016560) #23	PLEKHH3 (ENSPVAG00000016561) #24
Equus	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.bb #35	ENSGT00950000183207.b.e.cb #35
Donkey	MODERN SPECIES	4	RAB5C (ENSEASG00005032868) #7	KCNH4 (ENSEASG00005009291) #8	HCRT (ENSEASG00005009317) #9	GHDC (ENSEASG00005009320) #10	STAT5B (ENSEASG00005009440) ##12	STAT5A (ENSEASG00005009957) ##12	STAT3 (ENSEASG00005009961) #13	CAVIN1 (ENSEASG00005035749) #14	ATP6V0A1 (ENSEASG00005009965) #15	NAGLU (ENSEASG00005009968) #16	HSD17B1 (ENSEASG00005009974) #17	COASY (ENSEASG00005009980) #18	MLX (ENSEASG00005009988) #19	PSMC3IP (ENSEASG00005009999) #20	RETREG3 (ENSEASG00005026869) #21	TUBG1 (ENSEASG00005010016) #22	TUBG2 (ENSEASG00005010014) #23	PLEKHH3 (ENSEASG00005010019) #24	CCR10 (ENSEASG00005037671) #25	CNTNAP1 (ENSEASG00005010025) #26	EZH1 (ENSEASG00005010032) #27	ENSEASG00005010035 #28	ENSEASG00005028779 #29	VPS25 (ENSEASG00005026490) #29	WNK4 (ENSEASG00005010042) #30	ENSEASG00005010046 #31	CNTD1 (ENSEASG00005010048) #32	BECN1 (ENSEASG00005010049) #33	PSME3 (ENSEASG00005027152) #34	AOC2 (ENSEASG00005010052) ##35	ENSEASG00005023655 #35
Horse	DUPLICATION
Horse	MODERN SPECIES	2	ZNF385C (ENSECAG00000016402)	HSPB9 (ENSECAG00000048612)	RAB5C (ENSECAG00000025054) #7	KCNH4 (ENSECAG00000024953) #8	HCRT (ENSECAG00000001687) #9	GHDC (ENSECAG00000024665) #10	STAT5B (ENSECAG00000007847) ##12	STAT5A (ENSECAG00000012328) ##12	STAT3 (ENSECAG00000016439) #13	CAVIN1 (ENSECAG00000015071) #14	ATP6V0A1 (ENSECAG00000016326) #15	HSD17B1 (ENSECAG00000011423) #17	COASY (ENSECAG00000008468) #18	MLX (ENSECAG00000023980) #19	PSMC3IP (ENSECAG00000022323) #20	TUBG1 (ENSECAG00000027735) #22	RETREG3 (ENSECAG00000020676) #21	TUBG2 (ENSECAG00000037184) #22	PLEKHH3 (ENSECAG00000010506) #24	CCR10 (ENSECAG00000038719) #25	CNTNAP1 (ENSECAG00000024128) #26	EZH1 (ENSECAG00000008605) #27	RAMP2 (ENSECAG00000007412) #28	VPS25 (ENSECAG00000026807) #29	WNK4 (ENSECAG00000023887) #30	ENSECAG00000052196 #31	CNTD1 (ENSECAG00000026900) #32	BECN1 (ENSECAG00000018079) #33	AOC2 (ENSECAG00000011604) ##35	ENSECAG00000008739 #35	G6PC1 (ENSECAG00000000509) #35
Horse	MODERN SPECIES	2	RAB5C (ENSECAG00000025054) #7	KCNH4 (ENSECAG00000024953) #8	HCRT (ENSECAG00000001687) #9	GHDC (ENSECAG00000024665) #10	STAT5B (ENSECAG00000007847) ##12	STAT5A (ENSECAG00000012328) ##12	STAT3 (ENSECAG00000016439) #13	CAVIN1 (ENSECAG00000015071) #14	ATP6V0A1 (ENSECAG00000016326) #15	HSD17B1 (ENSECAG00000011423) #17	COASY (ENSECAG00000008468) #18	MLX (ENSECAG00000023980) #19	PSMC3IP (ENSECAG00000022323) #20	TUBG1 (ENSECAG00000027735) #22	RETREG3 (ENSECAG00000020676) #21	TUBG2 (ENSECAG00000037184) #22	PLEKHH3 (ENSECAG00000010506) #24	CCR10 (ENSECAG00000038719) #25	CNTNAP1 (ENSECAG00000024128) #26	EZH1 (ENSECAG00000008605) #27	RAMP2 (ENSECAG00000007412) #28	VPS25 (ENSECAG00000026807) #29	WNK4 (ENSECAG00000023887) #30	ENSECAG00000052196 #31	CNTD1 (ENSECAG00000026900) #32	BECN1 (ENSECAG00000018079) #33	AOC2 (ENSECAG00000011604) ##35	ENSECAG00000008739 #35	G6PC1 (ENSECAG00000000509) #35	AARSD1 (ENSECAG00000009275) #37	PTGES3L (ENSECAG00000041923)
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Canidae	ANCESTRAL SPECIES	2	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000162499 #23	ENSGT00940000154818.a.a	ENSGT00940000156957 #22	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.w #35	ENSGT00950000183207.b.e.x #35	ENSGT00950000183150.a.a #36
Red fox	MODERN SPECIES	241	KCNH4 (ENSVVUG00000021151) #8	HCRT (ENSVVUG00000021153) #9	GHDC (ENSVVUG00000021157) #10	STAT5B (ENSVVUG00000021246) ##12	STAT5A (ENSVVUG00000023740) ##12	STAT3 (ENSVVUG00000023746) #13	CAVIN1 (ENSVVUG00000023758) #14	ATP6V0A1 (ENSVVUG00000023762) #15	HSD17B1 (ENSVVUG00000023776) #17	COASY (ENSVVUG00000023777) #18	MLX (ENSVVUG00000023782) #19	PSMC3IP (ENSVVUG00000023787) #20	RETREG3 (ENSVVUG00000023799) #21	TUBG1 (ENSVVUG00000023803) #23	ENSVVUG00000023821	ENSVVUG00000023822 #22	PLEKHH3 (ENSVVUG00000023826) #24	CCR10 (ENSVVUG00000023842) #25	CNTNAP1 (ENSVVUG00000023844) #26	EZH1 (ENSVVUG00000023851) #27	RAMP2 (ENSVVUG00000023856) #28	VPS25 (ENSVVUG00000023858) #29	WNK4 (ENSVVUG00000023871) #30	COA3 (ENSVVUG00000023882) #31	CNTD1 (ENSVVUG00000023884) #32	BECN1 (ENSVVUG00000023885) #33	PSME3 (ENSVVUG00000023894) #34	AOC2 (ENSVVUG00000023930) ##35	AOC3 (ENSVVUG00000023933) #35	ENSVVUG00000023935 #35	G6PC (ENSVVUG00000023937) #36
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000154818.a.a	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.a #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.w #35
Dog	MODERN SPECIES	37	RAB5C (ENSCAFG00845010240) #7	KCNH4 (ENSCAFG00845010157) #8	HCRT (ENSCAFG00845010112) #9	GHDC (ENSCAFG00845010077) #10	STAT5B (ENSCAFG00845009970) ##12	STAT5A (ENSCAFG00845009709) ##12	STAT3 (ENSCAFG00845009322) #13	CAVIN1 (ENSCAFG00845009233) #14	ATP6V0A1 (ENSCAFG00845008916) #15	NAGLU (ENSCAFG00845008828) #16	HSD17B1 (ENSCAFG00845008784) #17	COASY (ENSCAFG00845008704) #18	ENSCAFG00845008619 #19	PSMC3IP (ENSCAFG00845008560) #20	RETREG3 (ENSCAFG00845008519) #21	TUBG1 (ENSCAFG00845008443) #22	ENSCAFG00845008414	TUBG1 (ENSCAFG00845008386) #23	PLEKHH3 (ENSCAFG00845008338) #24	CCR10 (ENSCAFG00845008299) #25	CNTNAP1 (ENSCAFG00845008178) #26	EZH1 (ENSCAFG00845007935) #27	RAMP2 (ENSCAFG00845007816) #28	VPS25 (ENSCAFG00845007769) #29	WNK4 (ENSCAFG00845007685) #30	CCDC56 (ENSCAFG00845007643) #31	PSME3 (ENSCAFG00845007621) #32	BECN1 (ENSCAFG00845007505) #33	PSME3 (ENSCAFG00845007222) #34	AOC2 (ENSCAFG00845006922) ##35	ENSCAFG00845006860 #35
Dingo	DUPLICATION
Dingo	MODERN SPECIES	150	HCRT (ENSCAFG00020013518) #9	GHDC (ENSCAFG00020013509) #10	STAT5B (ENSCAFG00020013496) ##12	STAT5A (ENSCAFG00020013492) ##12	STAT3 (ENSCAFG00020013489) #13	CAVIN1 (ENSCAFG00020013488) #14	ATP6V0A1 (ENSCAFG00020013479) #15	NAGLU (ENSCAFG00020013472) #16	HSD17B1 (ENSCAFG00020013468) #17	COASY (ENSCAFG00020013466) #18	MLX (ENSCAFG00020013445) #19	PSMC3IP (ENSCAFG00020013432) #20	RETREG3 (ENSCAFG00020013430) #21	ENSCAFG00020013165 #22	ENSCAFG00020013161	TUBG1 (ENSCAFG00020013158) #22	PLEKHH3 (ENSCAFG00020013156) #24	CCR10 (ENSCAFG00020013155) #25	CNTNAP1 (ENSCAFG00020013130) #26	EZH1 (ENSCAFG00020013112) #27	ENSCAFG00020013109 #28	VPS25 (ENSCAFG00020013078) #29	WNK4 (ENSCAFG00020013064) #30	ENSCAFG00020013061 #31	CNTD1 (ENSCAFG00020013052) #32	BECN1 (ENSCAFG00020013047) #33	PSME3 (ENSCAFG00020013044) #34	AOC2 (ENSCAFG00020013038) ##35	AOC3 (ENSCAFG00020013032) #35	G6PC1 (ENSCAFG00020013023) #36	AARSD1 (ENSCAFG00020013016) #37
Dingo	MODERN SPECIES	150	RAB5C (ENSCAFG00020013537) #7	KCNH4 (ENSCAFG00020013526) #8	HCRT (ENSCAFG00020013518) #9	GHDC (ENSCAFG00020013509) #10	STAT5B (ENSCAFG00020013496) ##12	STAT5A (ENSCAFG00020013492) ##12	STAT3 (ENSCAFG00020013489) #13	CAVIN1 (ENSCAFG00020013488) #14	ATP6V0A1 (ENSCAFG00020013479) #15	NAGLU (ENSCAFG00020013472) #16	HSD17B1 (ENSCAFG00020013468) #17	COASY (ENSCAFG00020013466) #18	MLX (ENSCAFG00020013445) #19	PSMC3IP (ENSCAFG00020013432) #20	RETREG3 (ENSCAFG00020013430) #21	ENSCAFG00020013165 #22	ENSCAFG00020013161	TUBG1 (ENSCAFG00020013158) #22	PLEKHH3 (ENSCAFG00020013156) #24	CCR10 (ENSCAFG00020013155) #25	CNTNAP1 (ENSCAFG00020013130) #26	EZH1 (ENSCAFG00020013112) #27	ENSCAFG00020013109 #28	VPS25 (ENSCAFG00020013078) #29	WNK4 (ENSCAFG00020013064) #30	ENSCAFG00020013061 #31	CNTD1 (ENSCAFG00020013052) #32	BECN1 (ENSCAFG00020013047) #33	PSME3 (ENSCAFG00020013044) #34	AOC2 (ENSCAFG00020013038) ##35	AOC3 (ENSCAFG00020013032) #35
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.u #35	ENSGT00950000183150.a.a #36
American mink	MODERN SPECIES	354	RAB5C (ENSNVIG00000012201) #7	ENSNVIG00000012231	KCNH4 (ENSNVIG00000012241) #8	HCRT (ENSNVIG00000012285) #9	GHDC (ENSNVIG00000012292) #10	STAT5B (ENSNVIG00000012318) ##12	STAT5A (ENSNVIG00000012373) ##12	STAT3 (ENSNVIG00000012502) #13	CAVIN1 (ENSNVIG00000012584) #14	ATP6V0A1 (ENSNVIG00000012603) #15	NAGLU (ENSNVIG00000012894) #16	ENSNVIG00000012908 #17	COASY (ENSNVIG00000012953) #18	PSMC3IP (ENSNVIG00000013036) #20	RETREG3 (ENSNVIG00000013070) #21	TUBG1 (ENSNVIG00000013082) #22	TUBG2 (ENSNVIG00000013103) #23	PLEKHH3 (ENSNVIG00000013123) #24	CCR10 (ENSNVIG00000013159) #25	CNTNAP1 (ENSNVIG00000013167) #26	EZH1 (ENSNVIG00000013268) #27	RAMP2 (ENSNVIG00000013365) #28	VPS25 (ENSNVIG00000013385) #29	WNK4 (ENSNVIG00000013400) #30	COA3 (ENSNVIG00000013432) #31	CNTD1 (ENSNVIG00000013440) #32	BECN1 (ENSNVIG00000013470) #33	PSME3 (ENSNVIG00000013505) #34	AOC2 (ENSNVIG00000013601) ##35	AOC3 (ENSNVIG00000013625) #35	G6PC1 (ENSNVIG00000013659) #36
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890.d #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.s #35	ENSGT00950000183207.b.e.t #35	ENSGT00950000183150.a.a #36
Giant Panda	MODERN SPECIES	4	KCNH4 (ENSAMEG00000006011) #8	HCRT (ENSAMEG00000027318) #9	GHDC (ENSAMEG00000006041) #10	STAT5B (ENSAMEG00000006061) ##12	ENSAMEG00000023775 ##12	ENSAMEG00000006086 ##12	STAT3 (ENSAMEG00000006266) #13	CAVIN1 (ENSAMEG00000026089) #14	ATP6V0A1 (ENSAMEG00000006373) #15	NAGLU (ENSAMEG00000006505) #16	HSD17B1 (ENSAMEG00000006514) #17	COASY (ENSAMEG00000006530) #18	MLX (ENSAMEG00000006549) #19	PSMC3IP (ENSAMEG00000006571) #20	RETREG3 (ENSAMEG00000006592) #21	TUBG2 (ENSAMEG00000029160) #22	PLEKHH3 (ENSAMEG00000024345) #24	CCR10 (ENSAMEG00000006670) #25	CNTNAP1 (ENSAMEG00000006676) #26	EZH1 (ENSAMEG00000006766) #27	RAMP2 (ENSAMEG00000006821) #28	VPS25 (ENSAMEG00000028167) #29	WNK4 (ENSAMEG00000006833) #30	ENSAMEG00000006865 #31	CNTD1 (ENSAMEG00000029702) #32	BECN1 (ENSAMEG00000006867) #33	PSME3 (ENSAMEG00000030967) #34	AOC2 (ENSAMEG00000026573) ##35	ENSAMEG00000006944 #35	ENSAMEG00000028162 #35	G6PC (ENSAMEG00000024422) #36
Ursus	ANCESTRAL SPECIES	79	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890.d #20	ENSGT00940000161349 #21	ENSGT00940000162499 #23	ENSGT00940000156957 #22	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.s #35	ENSGT00950000183207.b.e.t #35	ENSGT00950000183150.a.a #36
American black bear	MODERN SPECIES	796							CAVIN1 (ENSUAMG00000007322) #14	ATP6V0A1 (ENSUAMG00000007326) #15	NAGLU (ENSUAMG00000007333) #16	HSD17B1 (ENSUAMG00000007335) #17	COASY (ENSUAMG00000007339) #18	MLX (ENSUAMG00000007343) #19	PSMC3IP (ENSUAMG00000007345) #20	RETREG3 (ENSUAMG00000007350) #21	TUBG2 (ENSUAMG00000007351) #23	TUBG1 (ENSUAMG00000007353) #22	PLEKHH3 (ENSUAMG00000007359) #24	CCR10 (ENSUAMG00000007361) #25	CNTNAP1 (ENSUAMG00000007363) #26	EZH1 (ENSUAMG00000007364) #27
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.y #35	ENSGT00950000183207.b.e.z #35
Cat	MODERN SPECIES	245	KAT2A (ENSFCAG00000002146)	RAB5C (ENSFCAG00000002148) #7	KCNH4 (ENSFCAG00000002149) #8	GHDC (ENSFCAG00000002151) #10	STAT5B (ENSFCAG00000028112) ##12	STAT5A (ENSFCAG00000002153) ##12	STAT3 (ENSFCAG00000002154) #13	CAVIN1 (ENSFCAG00000043195) #14	ATP6V0A1 (ENSFCAG00000011658) #15	NAGLU (ENSFCAG00000011661) #16	HSD17B1 (ENSFCAG00000011663) #17	COASY (ENSFCAG00000033182) #18	MLX (ENSFCAG00000011667) #19	PSMC3IP (ENSFCAG00000011669) #20	RETREG3 (ENSFCAG00000011672) #21	TUBG1 (ENSFCAG00000031036) #22	PLEKHH3 (ENSFCAG00000011682) #24	CCR10 (ENSFCAG00000042553) #25	CNTNAP1 (ENSFCAG00000013129) #26	EZH1 (ENSFCAG00000013131) #27	RAMP2 (ENSFCAG00000009203) #28	VPS25 (ENSFCAG00000036322) #29	WNK4 (ENSFCAG00000026039) #30	COA3 (ENSFCAG00000013134) #31	CNTD1 (ENSFCAG00000034560) #32	BECN1 (ENSFCAG00000013136) #33	PSME3 (ENSFCAG00000013130) #34	AOC2 (ENSFCAG00000033935) ##35	ENSFCAG00000025774 #35	ENSFCAG00000013138 #35	G6PC1 (ENSFCAG00000036883) #36
Panthera	ANCESTRAL SPECIES	42	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.y #35	ENSGT00950000183207.b.e.z #35
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.y #35	ENSGT00950000183207.b.e.z #35
lion	MODERN SPECIES	14	RAB5C (ENSPLOG00000006779) #7	KCNH4 (ENSPLOG00000006814) #8	HCRT (ENSPLOG00000006873) #9	GHDC (ENSPLOG00000006895) #10	STAT5B (ENSPLOG00000006948) ##12	STAT5A (ENSPLOG00000007031) ##12	STAT3 (ENSPLOG00000007071) #13	CAVIN1 (ENSPLOG00000007125) #14	ATP6V0A1 (ENSPLOG00000007189) #15	NAGLU (ENSPLOG00000007269) #16	HSD17B1 (ENSPLOG00000007308) #17	COASY (ENSPLOG00000007342) #18	MLX (ENSPLOG00000007383) #19	PSMC3IP (ENSPLOG00000007422) #20	RETREG3 (ENSPLOG00000007498) #21	TUBG1 (ENSPLOG00000007531) #22	TUBG2 (ENSPLOG00000007571) #23	PLEKHH3 (ENSPLOG00000007622) #24	CCR10 (ENSPLOG00000007715) #25	CNTNAP1 (ENSPLOG00000007752) #26	EZH1 (ENSPLOG00000007923) #27	RAMP2 (ENSPLOG00000007987) #28	VPS25 (ENSPLOG00000008019) #29	WNK4 (ENSPLOG00000008212) #30	COA3 (ENSPLOG00000008329) #31	CNTD1 (ENSPLOG00000008363) #32	BECN1 (ENSPLOG00000008451) #33	PSME3 (ENSPLOG00000008573) #34	ARL4D (ENSPLOG00000008959)	DHX8 (ENSPLOG00000008992)	ETV4 (ENSPLOG00000009101)
leopard	MODERN SPECIES	177	KCNH4 (ENSPPRG00000005969) #8	ENSPPRG00000006867 #9	ENSPPRG00000007024 #9	GHDC (ENSPPRG00000007129) #10	STAT5B (ENSPPRG00000008075) ##12	STAT5A (ENSPPRG00000010705) ##12	STAT3 (ENSPPRG00000011309) #13	CAVIN1 (ENSPPRG00000011717) #14	ATP6V0A1 (ENSPPRG00000014481) #15	NAGLU (ENSPPRG00000014798) #16	HSD17B1 (ENSPPRG00000015435) #17	COASY (ENSPPRG00000016662) #18	MLX (ENSPPRG00000018438) #19	PSMC3IP (ENSPPRG00000019573) #20	RETREG3 (ENSPPRG00000021888) #21	TUBG1 (ENSPPRG00000000111) #22	TUBG2 (ENSPPRG00000000291) #23	PLEKHH3 (ENSPPRG00000000939) #24	CCR10 (ENSPPRG00000001107) #25	CNTNAP1 (ENSPPRG00000003989) #26	EZH1 (ENSPPRG00000006279) #27	RAMP2 (ENSPPRG00000006488) #28	VPS25 (ENSPPRG00000006995) #29	WNK4 (ENSPPRG00000007524) #30	COA3 (ENSPPRG00000007814) #31	CNTD1 (ENSPPRG00000008099) #32	BECN1 (ENSPPRG00000008498) #33	PSME3 (ENSPPRG00000009714) #34	AOC2 (ENSPPRG00000010462) ##35	ENSPPRG00000011276 #35	ENSPPRG00000012507 #35
Tiger	MODERN SPECIES	268	HSPB9 (ENSPTIG00000009844)	RAB5C (ENSPTIG00000008177) #7	KCNH4 (ENSPTIG00000008368) #8	GHDC (ENSPTIG00000008470) #10	STAT5B (ENSPTIG00000008621) ##12	STAT5A (ENSPTIG00000008753) ##12	STAT3 (ENSPTIG00000008816) #13	ENSPTIG00000009471 #14	ATP6V0A1 (ENSPTIG00000009577) #15	NAGLU (ENSPTIG00000010067) #16	ENSPTIG00000010104 #17	COASY (ENSPTIG00000010123) #18	MLX (ENSPTIG00000010375) #19	PSMC3IP (ENSPTIG00000010448) #20	RETREG3 (ENSPTIG00000010488) #21	TUBG1 (ENSPTIG00000010621) #22	TUBG2 (ENSPTIG00000010772) #23	CCR10 (ENSPTIG00000011098) #25	CNTNAP1 (ENSPTIG00000011410) #26	EZH1 (ENSPTIG00000011506) #27	RAMP2 (ENSPTIG00000011780) #28	VPS25 (ENSPTIG00000011784) #29	WNK4 (ENSPTIG00000011860) #30	COA3 (ENSPTIG00000011990) #31	CNTD1 (ENSPTIG00000012031) #32	BECN1 (ENSPTIG00000012052) #33	PSME3 (ENSPTIG00000012451) #34	AOC2 (ENSPTIG00000012543) ##35	ENSPTIG00000012595 #35	ENSPTIG00000012647 #35	G6PC1 (ENSPTIG00000012928) #36
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Suina	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Pig	MODERN SPECIES	3	HSPB9 (ENSSSCG00000017413)	RAB5C (ENSSSCG00000032467) #7	KCNH4 (ENSSSCG00000017411) #8	HCRT (ENSSSCG00000017410) #9	GHDC (ENSSSCG00000017407) #10	STAT5B (ENSSSCG00000017406) ##12	STAT5A (ENSSSCG00000017402) ##12	STAT3 (ENSSSCG00000017403) #13	CAVIN1 (ENSSSCG00000035446) #14	ATP6V0A1 (ENSSSCG00000017401) #15	NAGLU (ENSSSCG00000046466) #16	HSD17B1 (ENSSSCG00000035147) #17	COASY (ENSSSCG00000017398) #18	MLX (ENSSSCG00000017397) #19	PSMC3IP (ENSSSCG00000017396) #20	TUBG1 (ENSSSCG00000036106) #22	RETREG3 (ENSSSCG00000017395) #21	TUBG2 (ENSSSCG00000059397) #23	PLEKHH3 (ENSSSCG00000017391) #24	CCR10 (ENSSSCG00000017392) #25	CNTNAP1 (ENSSSCG00000017393) #26	EZH1 (ENSSSCG00000017382) #27	RAMP2 (ENSSSCG00000017389) #28	VPS25 (ENSSSCG00000034782) #29	WNK4 (ENSSSCG00000060121) #30	COA3 (ENSSSCG00000057849) #31	CNTD1 (ENSSSCG00000040866) #32	BECN1 (ENSSSCG00000017386) #33	PSME3 (ENSSSCG00000017385) #34	AOC2 (ENSSSCG00000017384) ##35	ENSSSCG00000037487 #35
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35
Camelidae	ANCESTRAL SPECIES	62	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000159764 #24	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36	ENSGT00940000156241 #37	ENSGT00940000163448
Arabian camel	MODERN SPECIES	7	RAB5C (ENSCDRG00005005039) #7	KCNH4 (ENSCDRG00005005095) #8	HCRT (ENSCDRG00005005115) #9	GHDC (ENSCDRG00005005131) #10	STAT5B (ENSCDRG00005005157) ##12	STAT5A (ENSCDRG00005005218) ##12	STAT3 (ENSCDRG00005005349) #13	CAVIN1 (ENSCDRG00005005412) #14	ATP6V0A1 (ENSCDRG00005005448) #15	NAGLU (ENSCDRG00005005587) #16	HSD17B1 (ENSCDRG00005005614) #17	COASY (ENSCDRG00005005644) #18	MLX (ENSCDRG00005005697) #19	PSMC3IP (ENSCDRG00005005763) #20	RETREG3 (ENSCDRG00005005794) #21	TUBG1 (ENSCDRG00005005832) #22	PLEKHH3 (ENSCDRG00005005924) #24	CNTNAP1 (ENSCDRG00005006112) #26	EZH1 (ENSCDRG00005006165) #27	RAMP2 (ENSCDRG00005006289) #28	VPS25 (ENSCDRG00005006372) #29	WNK4 (ENSCDRG00005006646) #30	COA3 (ENSCDRG00005009390) #31	CNTD1 (ENSCDRG00005009443) #32	BECN1 (ENSCDRG00005009558) #33	ENSCDRG00005009703 #34	AOC2 (ENSCDRG00005010275) ##35	AOC3 (ENSCDRG00005010395) #35	G6PC1 (ENSCDRG00005010533) #36	AARSD1 (ENSCDRG00005010624) #37	PTGES3L (ENSCDRG00005010839)
Alpaca	MODERN SPECIES	3492													MLX (ENSVPAG00000010327) #19	PSMC3IP (ENSVPAG00000010328) #20	RETREG3 (ENSVPAG00000010329) #21	TUBG1 (ENSVPAG00000010330) #22
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a #35
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a #35	ENSGT00950000183207.b.e.q.b #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35	ENSGT00950000183207.b.e.q.a.b #35
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35	ENSGT00950000183207.b.e.q.a.a.b #35
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262.e #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35	ENSGT00950000183207.b.e.q.a.a.b #35
Goat	MODERN SPECIES	10	KCNH4 (ENSCHIG00000004460) #8	HCRT (ENSCHIG00000025119) #9	GHDC (ENSCHIG00000008301) #10	STAT5B (ENSCHIG00000021723) ##12	STAT5A (ENSCHIG00000022084) ##12	STAT3 (ENSCHIG00000020307) #13	CAVIN1 (ENSCHIG00000021967) #14	ENSCHIG00000010030	ATP6V0A1 (ENSCHIG00000023886) #15	NAGLU (ENSCHIG00000025669) #16	HSD17B1 (ENSCHIG00000024608) #17	COASY (ENSCHIG00000015825) #18	MLX (ENSCHIG00000008566) #19	PSMC3IP (ENSCHIG00000016634) #20	RETREG3 (ENSCHIG00000021347) #21	TUBG1 (ENSCHIG00000023630) #22	TUBG2 (ENSCHIG00000017871) #23	PLEKHH3 (ENSCHIG00000009375) #24	CCR10 (ENSCHIG00000006150) #25	CNTNAP1 (ENSCHIG00000021718) #26	EZH1 (ENSCHIG00000021460) #27	RAMP2 (ENSCHIG00000009603) #28	VPS25 (ENSCHIG00000015624) #29	WNK4 (ENSCHIG00000020630) #30	ENSCHIG00000017406 #31	CNTD1 (ENSCHIG00000027036) #32	ENSCHIG00000021542 #33	PSME3 (ENSCHIG00000007996) #34	AOC2 (ENSCHIG00000013407) ##35	ENSCHIG00000006644 #35	ENSCHIG00000022166 #35
Rambouillet Sheep	MODERN SPECIES	2	RAB5C (ENSOARG00020003131) #7	KCNH4 (ENSOARG00020003088) #8	HCRT (ENSOARG00020003058) #9	GHDC (ENSOARG00020024276) #10	STAT5B (ENSOARG00020024144) ##12	STAT5A (ENSOARG00020024057) ##12	STAT3 (ENSOARG00020023991) #13	CAVIN1 (ENSOARG00020023973) #14	ATP6V0A1 (ENSOARG00020023829) #15	NAGLU (ENSOARG00020023775) #16	HSD17B1 (ENSOARG00020023741) #17	COASY (ENSOARG00020023711) #18	MLX (ENSOARG00020023627) #19	PSMC3IP (ENSOARG00020023582) #20	RETREG3 (ENSOARG00020023536) #21	TUBG1 (ENSOARG00020023516) #22	TUBG2 (ENSOARG00020023495) #23	PLEKHH3 (ENSOARG00020023384) #24	CCR10 (ENSOARG00020023357) #25	CNTNAP1 (ENSOARG00020023130) #26	EZH1 (ENSOARG00020023003) #27	RAMP2 (ENSOARG00020022922) #28	VPS25 (ENSOARG00020022861) #29	WNK4 (ENSOARG00020022783) #30	ENSOARG00020022706 #31	CNTD1 (ENSOARG00020022636) #32	BECN1 (ENSOARG00020022575) #33	PSME3 (ENSOARG00020022334) #34	AOC2 (ENSOARG00020022287) ##35	ENSOARG00020022200 #35	ENSOARG00020021890 #35
Bovinae	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35	ENSGT00950000183207.b.e.q.a.a.b #35
Bos	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871.c #30	ENSGT00940000159871.d #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35
Bos_b	ANCESTRAL SPECIES	21	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00940000154726.cb	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871.c #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35	ENSGT00950000183207.b.e.q.a.b #35
Cow	MODERN SPECIES	10	KCNH4 (ENSBTAG00000001195) #8	HCRT (ENSBTAG00000000665) #9	GHDC (ENSBTAG00000000666) #10	STAT5B (ENSBTAG00000010125) ##12	STAT5A (ENSBTAG00000009496) ##12	STAT3 (ENSBTAG00000021523) #13	CAVIN1 (ENSBTAG00000039684) #14	ENSBTAG00000053969	ATP6V0A1 (ENSBTAG00000019218) #15	NAGLU (ENSBTAG00000047956) #16	HSD17B1 (ENSBTAG00000047604) #17	COASY (ENSBTAG00000046746) #18	MLX (ENSBTAG00000046670) #19	PSMC3IP (ENSBTAG00000020907) #20	RETREG3 (ENSBTAG00000032493) #21	TUBG1 (ENSBTAG00000048152) #22	TUBG2 (ENSBTAG00000030347) #23	PLEKHH3 (ENSBTAG00000019090) #24	CCR10 (ENSBTAG00000019095) #25	CNTNAP1 (ENSBTAG00000019097) #26	EZH1 (ENSBTAG00000021918) #27	RAMP2 (ENSBTAG00000019903) #28	VPS25 (ENSBTAG00000019906) #29	WNK4 (ENSBTAG00000019907) #30	COA3 (ENSBTAG00000019911) #31	CNTD1 (ENSBTAG00000019912) #32	BECN1 (ENSBTAG00000019914) #33	PSME3 (ENSBTAG00000019918) #34	AOC2 (ENSBTAG00000030334) ##35	AOC3 (ENSBTAG00000030333) #35	SAO (ENSBTAG00000039321) #35
Hybrid Bos Indicus	MODERN SPECIES	10	KCNH4 (ENSBIXG00005031508) #8	HCRT (ENSBIXG00005031511) #9	GHDC (ENSBIXG00005029238) #10	STAT5B (ENSBIXG00005005263) ##12	STAT5A (ENSBIXG00005001732) ##12	STAT3 (ENSBIXG00005005192) #13	CAVIN1 (ENSBIXG00005005162) #14	ENSBIXG00005029091	ATP6V0A1 (ENSBIXG00005001971) #15	NAGLU (ENSBIXG00005028986) #16	HSD17B1 (ENSBIXG00005002112) #17	COASY (ENSBIXG00005028966) #18	MLX (ENSBIXG00005002178) #19	PSMC3IP (ENSBIXG00005028905) #20	RETREG3 (ENSBIXG00005028878) #21	TUBG1 (ENSBIXG00005002316) #22	TUBG2 (ENSBIXG00005028818) #23	PLEKHH3 (ENSBIXG00005028775) #24	CCR10 (ENSBIXG00005028708) #25	CNTNAP1 (ENSBIXG00005028679) #26	EZH1 (ENSBIXG00005028643) #27	ENSBIXG00005004901 #29	WNK4 (ENSBIXG00005004891) #30	COA3 (ENSBIXG00005006632) #31	CNTD1 (ENSBIXG00005028357) #32	BECN1 (ENSBIXG00005028310) #33	AOC3 (ENSBIXG00005006978) #35	PSME3 (ENSBIXG00005028112) #34	G6PC1 (ENSBIXG00005028063) #36	ENSBIXG00005028047	AARSD1 (ENSBIXG00005028036) #37
Bos_a	ANCESTRAL SPECIES		ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871.c #30	ENSGT00940000159871.d #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c.b #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.q.a.a.a #35
Wild yak	MODERN SPECIES	1070	RAB5C (ENSBMUG00000016674) #7	KCNH4 (ENSBMUG00000016638) #8	HCRT (ENSBMUG00000016604) #9	GHDC (ENSBMUG00000016589) #10	STAT5B (ENSBMUG00000016559) ##12	STAT5A (ENSBMUG00000016535) ##12	STAT3 (ENSBMUG00000016404) #13	CAVIN1 (ENSBMUG00000016260) #14	ATP6V0A1 (ENSBMUG00000016111) #15	NAGLU (ENSBMUG00000015830) #16	HSD17B1 (ENSBMUG00000015816) #17	COASY (ENSBMUG00000015802) #18	MLX (ENSBMUG00000015772) #19	PSMC3IP (ENSBMUG00000015726) #20	RETREG3 (ENSBMUG00000015711) #21	TUBG1 (ENSBMUG00000015682) #22	TUBG2 (ENSBMUG00000015667) #23	PLEKHH3 (ENSBMUG00000015646) #24	CCR10 (ENSBMUG00000015623) #25	CNTNAP1 (ENSBMUG00000015606) #26	EZH1 (ENSBMUG00000015578) #27	RAMP2 (ENSBMUG00000015457) #28	VPS25 (ENSBMUG00000015412) #29	ENSBMUG00000015390 #30
American bison	MODERN SPECIES	3101	KCNH4 (ENSBBBG00000010701) #8	HCRT (ENSBBBG00000010709) #9	GHDC (ENSBBBG00000010720) #10	STAT5B (ENSBBBG00000010796) ##12	STAT5A (ENSBBBG00000010980) ##12	STAT3 (ENSBBBG00000011063) #13	ENSBBBG00000001989 #14	ENSBBBG00000006763	ATP6V0A1 (ENSBBBG00000008542) #15	NAGLU (ENSBBBG00000011090) #16	HSD17B1 (ENSBBBG00000011096) #17	COASY (ENSBBBG00000011101) #18	MLX (ENSBBBG00000002005) #19	PSMC3IP (ENSBBBG00000011137) #20	RETREG3 (ENSBBBG00000011145) #21	TUBG1 (ENSBBBG00000011157) #22	TUBG2 (ENSBBBG00000011183) #23	CCR10 (ENSBBBG00000011187) #25	CNTNAP1 (ENSBBBG00000002032) #26	EZH1 (ENSBBBG00000002031) #27	RAMP2 (ENSBBBG00000011328) #28	VPS25 (ENSBBBG00000011356) #29	WNK4 (ENSBBBG00000011371) #30	COA3 (ENSBBBG00000011374) #31	CNTD1 (ENSBBBG00000002078) #32	BECN1 (ENSBBBG00000011400) #33	PSME3 (ENSBBBG00000011526) #34	AOC2 (ENSBBBG00000002115) ##35	ENSBBBG00000011564 #35	ENSBBBG00000011571 #35	ENSBBBG00000011659 #35
Siberian musk deer	MODERN SPECIES	1210	RAB5C (ENSMMSG00000015528) #7	KCNH4 (ENSMMSG00000015579) #8	HCRT (ENSMMSG00000015619) #9	GHDC (ENSMMSG00000015628) #10	STAT5B (ENSMMSG00000015678) ##12	STAT5A (ENSMMSG00000015758) ##12	STAT3 (ENSMMSG00000015883) #13	CAVIN1 (ENSMMSG00000015980) #14	ATP6V0A1 (ENSMMSG00000016103) #15	NAGLU (ENSMMSG00000016250) #16	HSD17B1 (ENSMMSG00000016275) #17	COASY (ENSMMSG00000016320) #18	MLX (ENSMMSG00000016399) #19	PSMC3IP (ENSMMSG00000016490) #20	RETREG3 (ENSMMSG00000016554) #21	TUBG1 (ENSMMSG00000016607) #22	TUBG2 (ENSMMSG00000016649) #23	PLEKHH3 (ENSMMSG00000016702) #24	CCR10 (ENSMMSG00000016758) #25	CNTNAP1 (ENSMMSG00000016812) #26	EZH1 (ENSMMSG00000016924) #27	RAMP2 (ENSMMSG00000017100) #28	VPS25 (ENSMMSG00000017149) #29	WNK4 (ENSMMSG00000017208) #30	ENSMMSG00000017247 #31	CNTD1 (ENSMMSG00000017264) #32	ENSMMSG00000017324 #33	ENSMMSG00000017360	PSME3 (ENSMMSG00000017401) #34	AOC2 (ENSMMSG00000017693) ##35	ENSMMSG00000017743 #35
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.r #35
Blue whale	MODERN SPECIES	12	KCNH4 (ENSBMSG00010019384) #8	HCRT (ENSBMSG00010019430) #9	GHDC (ENSBMSG00010019438) #10	STAT5B (ENSBMSG00010019463) ##12	STAT5A (ENSBMSG00010019534) ##12	STAT3 (ENSBMSG00010019642) #13	CAVIN1 (ENSBMSG00010019685) #14	ATP6V0A1 (ENSBMSG00010019699) #15	ENSBMSG00010019733	NAGLU (ENSBMSG00010019746) #16	HSD17B1 (ENSBMSG00010019767) #17	COASY (ENSBMSG00010019788) #18	MLX (ENSBMSG00010019816) #19	PSMC3IP (ENSBMSG00010019863) #20	RETREG3 (ENSBMSG00010019877) #21	TUBG1 (ENSBMSG00010019892) #22	TUBG2 (ENSBMSG00010019913) #23	PLEKHH3 (ENSBMSG00010019937) #24	CCR10 (ENSBMSG00010020019) #25	CNTNAP1 (ENSBMSG00010020039) #26	EZH1 (ENSBMSG00010020069) #27	RAMP2 (ENSBMSG00010020096) #28	VPS25 (ENSBMSG00010020131) #29	WNK4 (ENSBMSG00010020148) #30	COA3 (ENSBMSG00010020173) #31	CNTD1 (ENSBMSG00010020189) #32	BECN1 (ENSBMSG00010020223) #33	ENSBMSG00010020293 #34	AOC2 (ENSBMSG00010020418) ##35	ENSBMSG00010020442 #35	ENSBMSG00010020479 #35
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.r #35
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000006359	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.r #35
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000015789.d.b.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e.r #35
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b.b ##12	ENSGT00940000165581	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00940000164458	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00390000015789.d.b.a.b	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183150.a.a #36	ENSGT00940000156241 #37
Beluga whale	MODERN SPECIES	26	HCRT (ENSDLEG00000009165) #9	GHDC (ENSDLEG00000009124) #10	STAT5B (ENSDLEG00000009053) ##12	ENSDLEG00000009029	STAT5A (ENSDLEG00000008920) ##12	STAT3 (ENSDLEG00000008866) #13	CAVIN1 (ENSDLEG00000008839) #14	ENSDLEG00000008738	ATP6V0A1 (ENSDLEG00000008539) #15	NAGLU (ENSDLEG00000008492) #16	HSD17B1 (ENSDLEG00000008474) #17	COASY (ENSDLEG00000008450) #18	MLX (ENSDLEG00000017760) #19	PSMC3IP (ENSDLEG00000017649) #20	RETREG3 (ENSDLEG00000017608) #21	TUBG1 (ENSDLEG00000017452) #22	TUBG2 (ENSDLEG00000017379) #23	PLEKHH3 (ENSDLEG00000017343) #24	CCR10 (ENSDLEG00000017336) #25	CNTNAP1 (ENSDLEG00000017225) #26	EZH1 (ENSDLEG00000017160) #27	ENSDLEG00000017144	RAMP2 (ENSDLEG00000017131) #28	VPS25 (ENSDLEG00000017054) #29	WNK4 (ENSDLEG00000016953) #30	COA3 (ENSDLEG00000016939) #31	CNTD1 (ENSDLEG00000016928) #32	BECN1 (ENSDLEG00000016887) #33	PSME3 (ENSDLEG00000016851) #34	AOC2 (ENSDLEG00000016830) ##35	AOC3 (ENSDLEG00000016813) #35
Narwhal	MODERN SPECIES	316	HCRT (ENSMMNG00015018304) #9	GHDC (ENSMMNG00015018320) #10	ENSMMNG00015018346 ##12	ENSMMNG00015018372 ##12	ENSMMNG00015018391	ENSMMNG00015018416 ##12	STAT3 (ENSMMNG00015018456) #13	CAVIN1 (ENSMMNG00015018508) #14	ENSMMNG00015018524	ATP6V0A1 (ENSMMNG00015018592) #15	NAGLU (ENSMMNG00015018763) #16	COASY (ENSMMNG00015018830) #18	MLX (ENSMMNG00015018905) #19	PSMC3IP (ENSMMNG00015018975) #20	RETREG3 (ENSMMNG00015019095) #21	TUBG1 (ENSMMNG00015019140) #22	TUBG2 (ENSMMNG00015019177) #23	PLEKHH3 (ENSMMNG00015019203) #24	CCR10 (ENSMMNG00015019235) #25	CNTNAP1 (ENSMMNG00015019278) #26	EZH1 (ENSMMNG00015019325) #27	ENSMMNG00015019403	RAMP2 (ENSMMNG00015019428) #28	VPS25 (ENSMMNG00015019458) #29	WNK4 (ENSMMNG00015019498) #30	COA3 (ENSMMNG00015019546) #31	CNTD1 (ENSMMNG00015019563) #32	BECN1 (ENSMMNG00015019652) #33	PSME3 (ENSMMNG00015019711) #34	G6PC1 (ENSMMNG00015019843) #36	AARSD1 (ENSMMNG00015019881) #37
Vaquita	MODERN SPECIES	12	RAB5C (ENSPSNG00000015935) #7	KCNH4 (ENSPSNG00000016060) #8	HCRT (ENSPSNG00000016223) #9	GHDC (ENSPSNG00000016287) #10	STAT5B (ENSPSNG00000016379) ##12	STAT5A (ENSPSNG00000016550) ##12	STAT3 (ENSPSNG00000016713) #13	CAVIN1 (ENSPSNG00000016836) #14	ATP6V0A1 (ENSPSNG00000016923) #15	NAGLU (ENSPSNG00000017038) #16	HSD17B1 (ENSPSNG00000017086) #17	COASY (ENSPSNG00000017165) #18	MLX (ENSPSNG00000017239) #19	PSMC3IP (ENSPSNG00000017363) #20	RETREG3 (ENSPSNG00000017441) #21	TUBG1 (ENSPSNG00000017523) #22	TUBG2 (ENSPSNG00000017567) #23	PLEKHH3 (ENSPSNG00000017623) #24	CCR10 (ENSPSNG00000017844) #25	CNTNAP1 (ENSPSNG00000017895) #26	EZH1 (ENSPSNG00000017982) #27	ENSPSNG00000018136	VPS25 (ENSPSNG00000018196) #29	WNK4 (ENSPSNG00000018341) #30	CNTD1 (ENSPSNG00000018521) #32	BECN1 (ENSPSNG00000018622) #33	PSME3 (ENSPSNG00000018730) #34	AOC2 (ENSPSNG00000018847) ##35	AOC3 (ENSPSNG00000018919) #35	G6PC1 (ENSPSNG00000013217) #36	AARSD1 (ENSPSNG00000013368) #37
Dolphin	MODERN SPECIES	6285										NAGLU (ENSTTRG00000016413) #16	HSD17B1 (ENSTTRG00000016411) #17	COASY (ENSTTRG00000016409) #18	MLX (ENSTTRG00000016407) #19	PSMC3IP (ENSTTRG00000016406) #20	RETREG3 (ENSTTRG00000016405) #21	TUBG1 (ENSTTRG00000016404) #22
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	5	CNP (ENSPCTG00005009018)	DNAJC7 (ENSPCTG00005009095)	NKIRAS2 (ENSPCTG00005009177)	ZNF385C (ENSPCTG00005009258)	C17orf113 (ENSPCTG00005009444)	STAT5B (ENSPCTG00005009499) ##12	STAT5A (ENSPCTG00005009627) ##12	STAT3 (ENSPCTG00005009757) #13	ENSPCTG00005009976 ##15	EZH1 (ENSPCTG00005010030) #27	HSD17B1 (ENSPCTG00005010292) #17	COASY (ENSPCTG00005010374) #18	MLX (ENSPCTG00005010554) #19	PSMC3IP (ENSPCTG00005010711) #20	RETREG3 (ENSPCTG00005010862) #21	TUBG1 (ENSPCTG00005010947) #22	ENSPCTG00005011075 #22	COA3 (ENSPCTG00005011150) #31	CNTD1 (ENSPCTG00005011189) #32	BECN1 (ENSPCTG00005011315) #33	PSME3 (ENSPCTG00005011427) #34	AOC2 (ENSPCTG00005011473) ##35	ENSPCTG00005011580 #35	ENSPCTG00005011608 #35	G6PC (ENSPCTG00005011690) #36	ENSPCTG00005011820	AARSD1 (ENSPCTG00005011875) #37	PTGES3L (ENSPCTG00005011935)	ENSPCTG00005012012	ENSPCTG00005012041	ENSPCTG00005012077
Sperm whale	MODERN SPECIES	5	DNAJC7 (ENSPCTG00005009095)	NKIRAS2 (ENSPCTG00005009177)	ZNF385C (ENSPCTG00005009258)	C17orf113 (ENSPCTG00005009444)	STAT5B (ENSPCTG00005009499) ##12	STAT5A (ENSPCTG00005009627) ##12	STAT3 (ENSPCTG00005009757) #13	ENSPCTG00005009976 ##15	EZH1 (ENSPCTG00005010030) #27	HSD17B1 (ENSPCTG00005010292) #17	COASY (ENSPCTG00005010374) #18	MLX (ENSPCTG00005010554) #19	PSMC3IP (ENSPCTG00005010711) #20	RETREG3 (ENSPCTG00005010862) #21	TUBG1 (ENSPCTG00005010947) #22	ENSPCTG00005011075 #22	COA3 (ENSPCTG00005011150) #31	CNTD1 (ENSPCTG00005011189) #32	BECN1 (ENSPCTG00005011315) #33	PSME3 (ENSPCTG00005011427) #34	AOC2 (ENSPCTG00005011473) ##35	ENSPCTG00005011580 #35	ENSPCTG00005011608 #35	G6PC (ENSPCTG00005011690) #36	ENSPCTG00005011820	AARSD1 (ENSPCTG00005011875) #37	PTGES3L (ENSPCTG00005011935)	ENSPCTG00005012012	ENSPCTG00005012041	ENSPCTG00005012077	ETV4 (ENSPCTG00005012140)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Xenarthra	ANCESTRAL SPECIES	128																ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183207.b.e #35	ENSGT00940000156241 #37	ENSGT00390000007311	ENSGT00390000010721.a.b
Armadillo	MODERN SPECIES	4779																TUBG1 (ENSDNOG00000007019) #22	TUBG2 (ENSDNOG00000031693) #23	PLEKHH3 (ENSDNOG00000034610) #24	CCR10 (ENSDNOG00000013857) #25	CNTNAP1 (ENSDNOG00000013866) #26	EZH1 (ENSDNOG00000013912) #27	RAMP2 (ENSDNOG00000036920) #28	VPS25 (ENSDNOG00000013982) #29	WNK4 (ENSDNOG00000013996) #30	COA3 (ENSDNOG00000046588) #31	CNTD1 (ENSDNOG00000043655) #32	ENSDNOG00000044411 #33	ENSDNOG00000032327 #35	ENSDNOG00000032803	AARSD1 (ENSDNOG00000040976) #37	RUNDC1 (ENSDNOG00000005497)
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000154971 #7	ENSGT00940000156363 #8	ENSGT00390000014272 #9	ENSGT00390000016401 #10	ENSGT01080000257420.C.b.b.a.b.b ##12	ENSGT01080000257420.C.b.b.a.a ##12	ENSGT01050000244905.B #13	ENSGT00950000182910.b #14	ENSGT00950000182881.a.a.b #15	ENSGT00390000005900 #16	ENSGT00940000160415 #17	ENSGT00550000075078 #18	ENSGT00940000157377 #19	ENSGT00390000006890 #20	ENSGT00940000161349 #21	ENSGT00940000156957 #22	ENSGT00940000162499 #23	ENSGT00940000159764 #24	ENSGT01030000234667.a.a.a.a.a #25	ENSGT00940000160825 #26	ENSGT00940000156604 #27	ENSGT00940000160264 #28	ENSGT00390000014892 #29	ENSGT00940000159871 #30	ENSGT00390000016262 #31	ENSGT00440000033966 #32	ENSGT00390000008164.c #33	ENSGT00950000183098.a #34	ENSGT00950000183207.b.f ##35	ENSGT00950000183207.b.e #35	ENSGT00950000183150.a.a #36
Hyrax	MODERN SPECIES	5143												COASY (ENSPCAG00000014132) #18	MLX (ENSPCAG00000014225) #19	PSMC3IP (ENSPCAG00000014286) #20	RETREG3 (ENSPCAG00000014329) #21	TUBG1 (ENSPCAG00000014378) #22