Artiodactyla	ANCESTRAL SPECIES	20	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00900000143810	ENSGT00940000159542 #32	ENSGT00860000136016	ENSGT00390000001846 #34	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00900000143810	ENSGT00940000159542 #32	ENSGT00860000136016	ENSGT00390000001846 #34	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00900000143810	ENSGT00940000159542 #32	ENSGT00860000136016	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451
Pecora	ANCESTRAL SPECIES	20	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00900000143810	ENSGT00940000159542 #32	ENSGT00860000136016	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451
Percora_a	ANCESTRAL SPECIES	23	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784.a #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Bovidae	ANCESTRAL SPECIES	22	ENSGT00940000160438 #9	ENSGT00940000165441	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784.a #19	ENSGT00900000143784.b ##19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068
Caprinae	ANCESTRAL SPECIES	18	ENSGT00940000160438 #9	ENSGT00940000165441	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00860000135817	ENSGT00940000154977 #24	ENSGT00900000143784.a #19	ENSGT00900000143784.b ##19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00530000064276.b #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068	ENSGT00390000001057
Rambouillet Sheep	MODERN SPECIES	25	ENSOARG00020009783 #7	EYA1 (ENSOARG00020009883) #8	MSC (ENSOARG00020011918) #9	ENSOARG00020011953 #10	TRPA1 (ENSOARG00020011975) #11	KCNB2 (ENSOARG00020012309) #12	ENSOARG00020012394 #13	SBSPON (ENSOARG00020012699) #14	ENSOARG00020012778 #15	ENSOARG00020012848 #16	RDH10 (ENSOARG00020012918) #17	ENSOARG00020013038 #18	ENSOARG00020013951 #19	UBE2W (ENSOARG00020013983) #20	ENSOARG00020014058 #21	TMEM70 (ENSOARG00020014121) #22	LY96 (ENSOARG00020014177) #23	ENSOARG00020014317 #24	ENSOARG00020014341 #25	ENSOARG00020014381 #26	JPH1 (ENSOARG00020014507) #27	GDAP1 (ENSOARG00020014639) #28	PI15 (ENSOARG00020014740) #29	CRISPLD1 (ENSOARG00020014832) #30	HNF4G (ENSOARG00020015145) #31	ZFHX4 (ENSOARG00020015358) #32	ENSOARG00020015601 #33	PEX2 (ENSOARG00020015627) #34	ENSOARG00020015710 #35	ENSOARG00020015780 #36	ENSOARG00020015830 #37
Goat	MODERN SPECIES	5	MSC (ENSCHIG00000013609) #9	ENSCHIG00000024344	TRPA1 (ENSCHIG00000012691) #11	ENSCHIG00000023691	ENSCHIG00000018448	TERF1 (ENSCHIG00000011775) #13	SBSPON (ENSCHIG00000025814) #14	C8orf89 (ENSCHIG00000022018) #15	ENSCHIG00000008256 ##16	RDH10 (ENSCHIG00000016596) #17	ENSCHIG00000012339	STAU2 (ENSCHIG00000012254) #24	ENSCHIG00000015884 ##19	UBE2W (ENSCHIG00000025248) #20	ELOC (ENSCHIG00000015198) #21	TMEM70 (ENSCHIG00000019890) #22	LY96 (ENSCHIG00000012530) #23	ENSCHIG00000017122 #26	JPH1 (ENSCHIG00000017967) #27	GDAP1 (ENSCHIG00000006756) #28	PI15 (ENSCHIG00000016089) #29	CRISPLD1 (ENSCHIG00000016652) #30	HNF4G (ENSCHIG00000001150) #31	ENSCHIG00000020169	ZFHX4 (ENSCHIG00000017123) #32	PEX2 (ENSCHIG00000011681) #34	ENSCHIG00000024972	ENSCHIG00000012572	ENSCHIG00000017797 #36	ENSCHIG00000026486	PKIA (ENSCHIG00000022780) #37
Bovinae	ANCESTRAL SPECIES	18	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000165441	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00940000154433.a.a	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00940000155221.k.a	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Bos	ANCESTRAL SPECIES	21	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000156297.h	ENSGT00940000161902.a.a #12	ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.a.b	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00940000154433.a.a	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00940000156908 #20	ENSGT01100000263481.n.a.a.b.b.b.b.a.b.a.a.a	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00940000155221.k.a	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Bos_b	ANCESTRAL SPECIES	25	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000156297.h	ENSGT00940000161902.a.a #12	ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.a.b	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00940000154433.a.a	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00940000156908 #20	ENSGT01100000263481.n.a.a.b.b.b.b.a.b.a.a.a	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT01100000263481.n.a.a.a.a.a.a.a.b.b.a.a	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00390000010130.e.a.a	ENSGT00390000014038.c.f.a	ENSGT00940000167705	ENSGT00940000155221.k.a	ENSGT00530000064276 #37
Hybrid Bos Indicus	MODERN SPECIES	5	MSC (ENSBIXG00005003095) #9	ENSBIXG00005018963	TRPA1 (ENSBIXG00005018939) #11	ENSBIXG00005018912	KCNB2 (ENSBIXG00005018865) #12	ENSBIXG00005018850	TERF1 (ENSBIXG00005018827) #13	SBSPON (ENSBIXG00005018777) #14	C8orf89 (ENSBIXG00005018748) #15	ENSBIXG00005018714 #16	RDH10 (ENSBIXG00005018695) #17	STAU2 (ENSBIXG00005018623) #24	UBE2W (ENSBIXG00005002979) #20	ENSBIXG00005018349	ELOC (ENSBIXG00005018332) #21	TMEM70 (ENSBIXG00005002961) #22	LY96 (ENSBIXG00005005658) #23	ENSBIXG00005002958	ENSBIXG00005002956 #26	JPH1 (ENSBIXG00005018221) #27	GDAP1 (ENSBIXG00005018202) #28	PI15 (ENSBIXG00005018163) #29	CRISPLD1 (ENSBIXG00005002938) #30	ENSBIXG00005018061	HNF4G (ENSBIXG00005018048) #31	ZFHX4 (ENSBIXG00005002922) #32	PEX2 (ENSBIXG00005017958) #34	ENSBIXG00005017941	ENSBIXG00005006242	ENSBIXG00005017889	ENSBIXG00005017861
Cow	MODERN SPECIES	5	EYA1 (ENSBTAG00000011298) #8	MSC (ENSBTAG00000005404) #9	ENSBTAG00000048963	TRPA1 (ENSBTAG00000002062) #11	ENSBTAG00000053459	KCNB2 (ENSBTAG00000040496) #12	TERF1 (ENSBTAG00000032982) #13	SBSPON (ENSBTAG00000017249) #14	ENSBTAG00000048369	C14H8orf89 (ENSBTAG00000049035) #15	RPL7 (ENSBTAG00000020139) #16	RDH10 (ENSBTAG00000020143) #17	STAU2 (ENSBTAG00000002076) #24	UBE2W (ENSBTAG00000048843) #20	ELOC (ENSBTAG00000050514) #21	TMEM70 (ENSBTAG00000012920) #22	LY96 (ENSBTAG00000008864) #23	ENSBTAG00000048533	ENSBTAG00000032944 #26	JPH1 (ENSBTAG00000008842) #27	GDAP1 (ENSBTAG00000012608) #28	PI15 (ENSBTAG00000019587) #29	CRISPLD1 (ENSBTAG00000004411) #30	HNF4G (ENSBTAG00000008280) #31	ZFHX4 (ENSBTAG00000033268) #32	PEX2 (ENSBTAG00000003885) #34	ENSBTAG00000032831	ENSBTAG00000039499	ENSBTAG00000050099	ENSBTAG00000009539 #36	PKIA (ENSBTAG00000008150) #37
Bos_a	ANCESTRAL SPECIES	42	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000156297.h	ENSGT00940000161902.a.a #12	ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.a.b	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.b.a.a.b #16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00940000156908 #20	ENSGT01100000263481.n.a.a.b.b.b.b.a.b.a.a.a	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00950000182990.a.a.a.b.u.a.b #26	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00940000155221.k.a	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a
Domestic yak	MODERN SPECIES	9	EYA1 (ENSBGRG00000012869) #8	ENSBGRG00000013347	MSC (ENSBGRG00000013369) #9	TRPA1 (ENSBGRG00000013391) #11	KCNB2 (ENSBGRG00000013790) #12	ENSBGRG00000013834	TERF1 (ENSBGRG00000013857) #13	SBSPON (ENSBGRG00000014028) #14	C8orf89 (ENSBGRG00000014079) #15	ENSBGRG00000014160 #16	RDH10 (ENSBGRG00000014304) #17	STAU2 (ENSBGRG00000014445) #24	UBE2W (ENSBGRG00000015045) #20	ENSBGRG00000015172	ELOC (ENSBGRG00000015189) #21	ENSBGRG00000015282 #22	LY96 (ENSBGRG00000015389) #23	FADS2 (ENSBGRG00000015525) #26	JPH1 (ENSBGRG00000015605) #27	GDAP1 (ENSBGRG00000015785) #28	PI15 (ENSBGRG00000015926) #29	ENSBGRG00000016157	CRISPLD1 (ENSBGRG00000016187) #30	ENSBGRG00000016483	HNF4G (ENSBGRG00000016548) #31	ZFHX4 (ENSBGRG00000016680) #32	ENSBGRG00000016816	ENSBGRG00000016845	PEX2 (ENSBGRG00000016881) #34	ENSBGRG00000016950	ENSBGRG00000017028
Wild yak	MODERN SPECIES	2105										C8orf89 (ENSBMUG00000010254) #15	ENSBMUG00000010227 #16	RDH10 (ENSBMUG00000010206) #17	STAU2 (ENSBMUG00000010133) #24	UBE2W (ENSBMUG00000010030) #20	ELOC (ENSBMUG00000010007) #21	TMEM70 (ENSBMUG00000009997) #22	LY96 (ENSBMUG00000009985) #23	ENSBMUG00000009967 #26
American bison	MODERN SPECIES	3158	XKR9 (ENSBBBG00000005385)	EYA1 (ENSBBBG00000020229) #8	MSC (ENSBBBG00000005473) #9	ENSBBBG00000008392	TRPA1 (ENSBBBG00000020321) #11	KCNB2 (ENSBBBG00000020338) #12	TERF1 (ENSBBBG00000020376) #13	SBSPON (ENSBBBG00000006971) #14	ENSBBBG00000005516	C8orf89 (ENSBBBG00000007918) #15	ENSBBBG00000000682 #16	RDH10 (ENSBBBG00000000657) #17	STAU2 (ENSBBBG00000000550) #24	UBE2W (ENSBBBG00000000523) #20	ENSBBBG00000005523 #21	TMEM70 (ENSBBBG00000020425) #22	LY96 (ENSBBBG00000006972) #23	ENSBBBG00000008573 #26	ENSBBBG00000020454	JPH1 (ENSBBBG00000020471) #27	GDAP1 (ENSBBBG00000020488) #28
Siberian musk deer	MODERN SPECIES	179			MSC (ENSMMSG00000010845) #9	TRPA1 (ENSMMSG00000010804) #11	KCNB2 (ENSMMSG00000010769) #12	TERF1 (ENSMMSG00000010691) #13	SBSPON (ENSMMSG00000010657) #14	C8orf89 (ENSMMSG00000010625) #15	ENSMMSG00000010574 ##16	RDH10 (ENSMMSG00000010547) #17	ENSMMSG00000010536	STAU2 (ENSMMSG00000010192) #24	ENSMMSG00000010135 #19	UBE2W (ENSMMSG00000010093) #20	ENSMMSG00000010052 #21	TMEM70 (ENSMMSG00000010023) #22	LY96 (ENSMMSG00000009965) #23	ENSMMSG00000009942	ENSMMSG00000009924 #26	JPH1 (ENSMMSG00000009896) #27	GDAP1 (ENSMMSG00000009866) #28	PI15 (ENSMMSG00000009843) #29	CRISPLD1 (ENSMMSG00000009747) #30	ENSMMSG00000009729	ENSMMSG00000009721	HNF4G (ENSMMSG00000009664) #31	ENSMMSG00000009642	ZFHX4 (ENSMMSG00000009465) #32	PEX2 (ENSMMSG00000009421) #34	ENSMMSG00000009363	ENSMMSG00000009310 #36
Yarkand deer	MODERN SPECIES	13	XKR9 (ENSCHYG00000007891)	EYA1 (ENSCHYG00000007976) #8	MSC (ENSCHYG00000008474) #9	TRPA1 (ENSCHYG00000008486) #11	KCNB2 (ENSCHYG00000008544) #12	TERF1 (ENSCHYG00000008580) #13	SBSPON (ENSCHYG00000008716) #14	ENSCHYG00000008805 #15	ENSCHYG00000008967 #16	RDH10 (ENSCHYG00000009053) #17	STAU2 (ENSCHYG00000009132) #24	ENSCHYG00000009593 #19	UBE2W (ENSCHYG00000009632) #20	ENSCHYG00000009717	ELOC (ENSCHYG00000009736) #21	ENSCHYG00000009778 #22	LY96 (ENSCHYG00000009842) #23	ENSCHYG00000009963 ##26	ENSCHYG00000010001	JPH1 (ENSCHYG00000010044) #27	GDAP1 (ENSCHYG00000010142) #28	PI15 (ENSCHYG00000010209) #29	CRISPLD1 (ENSCHYG00000010262) #30	HNF4G (ENSCHYG00000010531) #31	ENSCHYG00000010646	ZFHX4 (ENSCHYG00000010700) #32	ENSCHYG00000010831	PEX2 (ENSCHYG00000010856) #34	ENSCHYG00000010917	ENSCHYG00000010953	PKIA (ENSCHYG00000011022) #37
Cetacea	ANCESTRAL SPECIES	17	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.o.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224.e #31	ENSGT00860000136016	ENSGT00940000158224.f #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451
Blue whale	MODERN SPECIES	8	TRAM1 (ENSBMSG00010018261)	LACTB2 (ENSBMSG00010018234)	XKR9 (ENSBMSG00010018196)	EYA1 (ENSBMSG00010015724) #8	MSC (ENSBMSG00010015575) #9	TRPA1 (ENSBMSG00010015425) #11	KCNB2 (ENSBMSG00010015388) #12	TERF1 (ENSBMSG00010015326) #13	SBSPON (ENSBMSG00010015272) #14	C8orf89 (ENSBMSG00010015187) #15	ENSBMSG00010015143 ##16	RDH10 (ENSBMSG00010015098) #17	STAU2 (ENSBMSG00010014812) #24	UBE2W (ENSBMSG00010014697) #20	ELOC (ENSBMSG00010014660) #21	TMEM70 (ENSBMSG00010014605) #22	LY96 (ENSBMSG00010014528) #23	ENSBMSG00010014502	JPH1 (ENSBMSG00010014447) #27	GDAP1 (ENSBMSG00010014362) #28	PI15 (ENSBMSG00010014313) #29	CRISPLD1 (ENSBMSG00010014061) #30	ENSBMSG00010013908 #31	ZFHX4 (ENSBMSG00010013810) #32	PEX2 (ENSBMSG00010013792) #34	ZC2HC1A (ENSBMSG00010013732)	IL7 (ENSBMSG00010013548)	STMN2 (ENSBMSG00010013509)	HEY1 (ENSBMSG00010013494)	MRPS28 (ENSBMSG00010013480)	TPD52 (ENSBMSG00010013381)
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.b ##16	ENSGT00950000182878.b.a.c.a.a.b.o.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224.e #31	ENSGT00860000136016	ENSGT00940000158224.f #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451
Sperm whale	MODERN SPECIES	6	ENSPCTG00005012948	LACTB2 (ENSPCTG00005012903)	XKR9 (ENSPCTG00005012862)	EYA1 (ENSPCTG00005012471) #8	MSC (ENSPCTG00005012407) #9	KCNB2 (ENSPCTG00005012357) #12	TERF1 (ENSPCTG00005012235) #13	SBSPON (ENSPCTG00005012166) #14	ENSPCTG00005012151	C8orf89 (ENSPCTG00005012085) #15	RPL7 (ENSPCTG00005012045) ##16	RDH10 (ENSPCTG00005012025) #17	STAU2 (ENSPCTG00005011573) #24	UBE2W (ENSPCTG00005011445) #20	ELOC (ENSPCTG00005011391) #21	TMEM70 (ENSPCTG00005011318) #22	LY96 (ENSPCTG00005011266) #23	JPH1 (ENSPCTG00005011206) #27	ENSPCTG00005011181 #28	GDAP1 (ENSPCTG00005011068) #28	PI15 (ENSPCTG00005011017) #29	CRISPLD1 (ENSPCTG00005010715) #30	HNF4G (ENSPCTG00005010506) #31	ENSPCTG00005010442	ZFHX4 (ENSPCTG00005010281) #32	PEX2 (ENSPCTG00005010259) #34	PKIA (ENSPCTG00005010216) #37	ZC2HC1A (ENSPCTG00005010184)	IL7 (ENSPCTG00005009952)	STMN2 (ENSPCTG00005009853)	HEY1 (ENSPCTG00005009776)
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224.e #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068
Dolphin	MODERN SPECIES	6743														UBE2W (ENSTTRG00000011532) #20	ELOC (ENSTTRG00000011534) #21	TMEM70 (ENSTTRG00000011536) #22
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224.e #31	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00940000167705	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068
Vaquita	MODERN SPECIES	8	TRAM1 (ENSPSNG00000020346)	LACTB2 (ENSPSNG00000020382)	ENSPSNG00000020404	EYA1 (ENSPSNG00000020480) #8	MSC (ENSPSNG00000020681) #9	KCNB2 (ENSPSNG00000004806) #12	TERF1 (ENSPSNG00000004882) #13	SBSPON (ENSPSNG00000004956) #14	ENSPSNG00000004986 #15	ENSPSNG00000005013 ##16	RDH10 (ENSPSNG00000005028) #17	STAU2 (ENSPSNG00000005150) #24	UBE2W (ENSPSNG00000005356) #20	ENSPSNG00000005396 #19	ELOC (ENSPSNG00000005415) #21	TMEM70 (ENSPSNG00000005441) #22	LY96 (ENSPSNG00000005474) #23	JPH1 (ENSPSNG00000005517) #27	GDAP1 (ENSPSNG00000005537) #28	PI15 (ENSPSNG00000005567) #29	CRISPLD1 (ENSPSNG00000005622) #30	HNF4G (ENSPSNG00000005772) #31	ZFHX4 (ENSPSNG00000005887) #32	ENSPSNG00000005941	PEX2 (ENSPSNG00000005968) #34	ENSPSNG00000006001	ZC2HC1A (ENSPSNG00000006073)	IL7 (ENSPSNG00000006143)	ENSPSNG00000006245	STMN2 (ENSPSNG00000006270)	HEY1 (ENSPSNG00000006310)
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000164329	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00900000143620	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224.e #31	ENSGT01060000251139	ENSGT00940000159542 #32	ENSGT00390000001846 #34	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068
Narwhal	MODERN SPECIES	300	LACTB2 (ENSMMNG00015003093)	XKR9 (ENSMMNG00015003076)	EYA1 (ENSMMNG00015002802) #8	MSC (ENSMMNG00015002699) #9	ENSMMNG00015002685	KCNB2 (ENSMMNG00015002669) #12	TERF1 (ENSMMNG00015002637) #13	SBSPON (ENSMMNG00015002614) #14	C8orf89 (ENSMMNG00015002592) #15	ENSMMNG00015002563 ##16	RDH10 (ENSMMNG00015002543) #17	STAU2 (ENSMMNG00015002374) #24	ENSMMNG00015002279 #19	UBE2W (ENSMMNG00015002247) #20	ELOC (ENSMMNG00015002226) #21	TMEM70 (ENSMMNG00015002203) #22	LY96 (ENSMMNG00015002169) #23	ENSMMNG00015002149	JPH1 (ENSMMNG00015002132) #27	GDAP1 (ENSMMNG00015002099) #28	PI15 (ENSMMNG00015002080) #29	CRISPLD1 (ENSMMNG00015002015) #30	HNF4G (ENSMMNG00015001939) #31	ENSMMNG00015001919	ZFHX4 (ENSMMNG00015001886) #32	PEX2 (ENSMMNG00015001870) #34	ENSMMNG00015001847 #37	ENSMMNG00015001830 #37	ENSMMNG00015001818	PKIA (ENSMMNG00015001804) #37	ENSMMNG00015001783
Beluga whale	MODERN SPECIES	47	LACTB2 (ENSDLEG00000009968)	XKR9 (ENSDLEG00000009950)	EYA1 (ENSDLEG00000009896) #8	MSC (ENSDLEG00000009878) #9	ENSDLEG00000009870	ENSDLEG00000009855	TERF1 (ENSDLEG00000009802) #13	SBSPON (ENSDLEG00000009779) #14	ENSDLEG00000009739 #15	ENSDLEG00000009726 ##16	RDH10 (ENSDLEG00000009707) #17	STAU2 (ENSDLEG00000009498) #24	ENSDLEG00000009446 #19	UBE2W (ENSDLEG00000009268) #20	ELOC (ENSDLEG00000009234) ##21	TMEM70 (ENSDLEG00000009224) #22	LY96 (ENSDLEG00000009209) #23	JPH1 (ENSDLEG00000009187) #27	GDAP1 (ENSDLEG00000009114) #28	PI15 (ENSDLEG00000009063) #29	CRISPLD1 (ENSDLEG00000008998) #30	ENSDLEG00000008778 #31	ENSDLEG00000008703 #31	ENSDLEG00000008687	ZFHX4 (ENSDLEG00000008661) #32	PEX2 (ENSDLEG00000008648) #34
Camelidae	ANCESTRAL SPECIES	78	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.o ##16	ENSGT00950000182878.b.a.c.a.b ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00860000136016	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068	ENSGT00390000001057	ENSGT00940000155294	ENSGT00940000157988
Arabian camel	MODERN SPECIES	21	EYA1 (ENSCDRG00005009336) #8	MSC (ENSCDRG00005010164) #9	TRPA1 (ENSCDRG00005010216) #11	KCNB2 (ENSCDRG00005010556) #12	ENSCDRG00005010585	ENSCDRG00005010611	TERF1 (ENSCDRG00005010658) #13	SBSPON (ENSCDRG00005010764) #14	C8orf89 (ENSCDRG00005010821) #15	RPL7 (ENSCDRG00005010887) ##16	RDH10 (ENSCDRG00005010950) #17	STAU2 (ENSCDRG00005011071) #24	ENSCDRG00005012532 #19	UBE2W (ENSCDRG00005012587) #20	ELOC (ENSCDRG00005012751) #21	TMEM70 (ENSCDRG00005012795) #22	LY96 (ENSCDRG00005012835) #23	JPH1 (ENSCDRG00005012921) #27	GDAP1 (ENSCDRG00005012959) #28	PI15 (ENSCDRG00005013033) #29	CRISPLD1 (ENSCDRG00005013090) #30	HNF4G (ENSCDRG00005013295) #31	ENSCDRG00005013486	PEX2 (ENSCDRG00005013522) #34	ENSCDRG00005013542	PKIA (ENSCDRG00005013565) #37	ZC2HC1A (ENSCDRG00005013616)	IL7 (ENSCDRG00005013707)	STMN2 (ENSCDRG00005014305)	HEY1 (ENSCDRG00005014340)	MRPS28 (ENSCDRG00005014385)
Alpaca	MODERN SPECIES	2123																TMEM70 (ENSVPAG00000011207) #22	ENSVPAG00000011209 #23	JPH1 (ENSVPAG00000011210) #27	GDAP1 (ENSVPAG00000011212) #28	PI15 (ENSVPAG00000011213) #29	CRISPLD1 (ENSVPAG00000011214) #30
Suina	ANCESTRAL SPECIES	26	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a #8	ENSGT00940000160438 #9	ENSGT00940000156118 #11	ENSGT00940000161902.a.a #12	ENSGT00940000155268 #13	ENSGT00390000008325.b.b #14	ENSGT00700000106212 #15	ENSGT00950000182878.b.a.c.a.a.b.p.a ##16	ENSGT00940000157063 #17	ENSGT00940000154977 #24	ENSGT00900000143784 #19	ENSGT00940000156908 #20	ENSGT00390000011717.ee #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b #27	ENSGT00940000159124 #28	ENSGT00940000158635 #29	ENSGT00940000156473 #30	ENSGT00940000158224 #31	ENSGT00940000159542 #32	ENSGT00860000136016	ENSGT00390000001846 #34	ENSGT00530000064276 #37	ENSGT00940000159419	ENSGT00390000004451	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00940000157068	ENSGT00390000001057
Chacoan peccary	MODERN SPECIES	840	LACTB2 (ENSCWAG00000016754)	XKR9 (ENSCWAG00000016786)	EYA1 (ENSCWAG00000016910) #8	MSC (ENSCWAG00000019294) #9	TRPA1 (ENSCWAG00000019321) #11	KCNB2 (ENSCWAG00000019431) #12	TERF1 (ENSCWAG00000019459) #13	SBSPON (ENSCWAG00000019514) #14	C8orf89 (ENSCWAG00000019549) #15	RPL7 (ENSCWAG00000019595) ##16	RDH10 (ENSCWAG00000019611) #17	STAU2 (ENSCWAG00000019672) #24	ENSCWAG00000019871 #19	UBE2W (ENSCWAG00000019888) #20	ELOC (ENSCWAG00000019912) #21	TMEM70 (ENSCWAG00000019932) #22	LY96 (ENSCWAG00000019956) #23	JPH1 (ENSCWAG00000019981) #27	GDAP1 (ENSCWAG00000019998) #28	PI15 (ENSCWAG00000020042) #29	CRISPLD1 (ENSCWAG00000020065) #30	HNF4G (ENSCWAG00000020166) #31	ZFHX4 (ENSCWAG00000020221) #32	ENSCWAG00000020260	PEX2 (ENSCWAG00000008018) #34
Pig	MODERN SPECIES	12	TRAM1 (ENSSSCG00000006193)	LACTB2 (ENSSSCG00000006192)	XKR9 (ENSSSCG00000006191)	EYA1 (ENSSSCG00000040728) #8	MSC (ENSSSCG00000006187) #9	TRPA1 (ENSSSCG00000006186) #11	KCNB2 (ENSSSCG00000006185) #12	TERF1 (ENSSSCG00000006184) #13	SBSPON (ENSSSCG00000006183) #14	C8orf89 (ENSSSCG00000032228) #15	RPL7 (ENSSSCG00000032111) ##16	RDH10 (ENSSSCG00000033669) #17	STAU2 (ENSSSCG00000006179) #24	UBE2W (ENSSSCG00000006177) #20	ENSSSCG00000006176 #21	TMEM70 (ENSSSCG00000021628) #22	LY96 (ENSSSCG00000006175) #23	JPH1 (ENSSSCG00000006174) #27	GDAP1 (ENSSSCG00000006173) #28	PI15 (ENSSSCG00000006172) #29	CRISPLD1 (ENSSSCG00000006171) #30	HNF4G (ENSSSCG00000034242) #31	ENSSSCG00000041325	ENSSSCG00000051708	ENSSSCG00000045839	ENSSSCG00000037048	ZFHX4 (ENSSSCG00000006169) #32	PEX2 (ENSSSCG00000006168) #34	PKIA (ENSSSCG00000006163) #37	ENSSSCG00000036495	ZC2HC1A (ENSSSCG00000006162)