Mus	ANCESTRAL SPECIES	3	ENSGT00950000183021.a.a.b	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a	ENSGT00940000160438	ENSGT00940000156118 #10	ENSGT00940000155268 #14	ENSGT00390000008325.b.b #15	ENSGT00700000106212 #16	ENSGT00950000182878.b.a.c.a.b #17	ENSGT00940000157063 #18	ENSGT00940000154977 #19	ENSGT00940000156908 #20	ENSGT00390000011717 #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b	ENSGT00940000159124	ENSGT00940000158635	ENSGT00940000156473
Mus_A	ANCESTRAL SPECIES	5	ENSGT00950000183021.a.a.b	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a	ENSGT00940000160438	ENSGT00940000156118 #10	ENSGT00940000155268 #14	ENSGT00390000008325.b.b #15	ENSGT00700000106212 #16	ENSGT00950000182878.b.a.c.a.b #17	ENSGT00940000157063 #18	ENSGT00940000154977 #19	ENSGT00940000156908 #20	ENSGT00390000011717 #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b	ENSGT00940000159124	ENSGT00940000158635	ENSGT00940000156473	ENSGT00940000162362	ENSGT00400000023306	ENSGT00390000006761	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860
Mus_B	ANCESTRAL SPECIES	21	ENSGT00950000183021.a.a.b	ENSGT00510000046470.a.a.a.d.a	ENSGT00390000001710	ENSGT01090000260093.a	ENSGT00950000182978.A.a.b.a	ENSGT00940000160438	ENSGT00940000156118 #10	ENSGT00940000155268 #14	ENSGT00390000008325.b.b #15	ENSGT00700000106212 #16	ENSGT00950000182878.b.a.c.a.b #17	ENSGT00940000157063 #18	ENSGT00940000154977 #19	ENSGT00940000156908 #20	ENSGT00390000011717 #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b	ENSGT00940000159124	ENSGT00940000158635	ENSGT00940000156473	ENSGT00940000162362	ENSGT00400000023306	ENSGT00390000006761	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154681.a	ENSGT00950000182909.b.b.a	ENSGT00530000063956.a	ENSGT00940000157210	ENSGT00940000158019	ENSGT00940000153709.A	ENSGT00940000154899 #12	ENSGT00940000155268 #14	ENSGT00390000008325.b.b #15	ENSGT00700000106212 #16	ENSGT00950000182878.b.a.c.a.b #17	ENSGT00940000157063 #18	ENSGT00940000154977 #19	ENSGT00940000156908 #20	ENSGT00390000011717 #21	ENSGT00390000018710 #22	ENSGT00390000000742 #23	ENSGT00940000156130.b	ENSGT00940000159124	ENSGT00940000158635	ENSGT00940000156473	ENSGT00940000162362	ENSGT00400000023306	ENSGT00390000006761	ENSGT00950000182848.d	ENSGT00950000182848.c.b.b.b	ENSGT00940000160697	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860
Steppe mouse	MODERN SPECIES	3112				Trpa1 (ENSMSIG00000008184) #10	ENSMSIG00000008268 #11	Kcnb2 (ENSMSIG00000008283) #12	ENSMSIG00000008321 #13	Terf1 (ENSMSIG00000008344) #14	Sbspon (ENSMSIG00000008395) #15	4930444P10Rik (ENSMSIG00000008432) #16	ENSMSIG00000008454 #17	Rdh10 (ENSMSIG00000008466) #18	Stau2 (ENSMSIG00000008506) #19	ENSMSIG00000008651 #20	Eloc (ENSMSIG00000008694) #21	Tmem70 (ENSMSIG00000008764) #22	Ly96 (ENSMSIG00000008783) #23	ENSMSIG00000008820 #24
spretus	MODERN SPECIES		Lactb2 (MGP_SPRETEiJ_G0014760)	Xkr9 (MGP_SPRETEiJ_G0014761)	Eya1 (MGP_SPRETEiJ_G0014762)	Msc (MGP_SPRETEiJ_G0014763)	Trpa1 (MGP_SPRETEiJ_G0014764) #10	MGP_SPRETEiJ_G0014765 ##11	Kcnb2 (MGP_SPRETEiJ_G0014766) #12	Terf1 (MGP_SPRETEiJ_G0014767) #14	Sbspon (MGP_SPRETEiJ_G0014768) #15	4930444P10Rik (MGP_SPRETEiJ_G0014769) #16	Rpl7 (MGP_SPRETEiJ_G0014770) #17	Rdh10 (MGP_SPRETEiJ_G0014771) #18	Stau2 (MGP_SPRETEiJ_G0014772) #19	MGP_SPRETEiJ_G0014773 #20	Eloc (MGP_SPRETEiJ_G0014774) #21	Tmem70 (MGP_SPRETEiJ_G0014775) #22	Ly96 (MGP_SPRETEiJ_G0014776) #23	Jph1 (MGP_SPRETEiJ_G0014777)	Gdap1 (MGP_SPRETEiJ_G0014778)	Pi15 (MGP_SPRETEiJ_G0014779)	Crispld1 (MGP_SPRETEiJ_G0014780)	Crisp4 (MGP_SPRETEiJ_G0014781)	Defb18 (MGP_SPRETEiJ_G0014782)	Defb41 (MGP_SPRETEiJ_G0014783)	Tfap2d (MGP_SPRETEiJ_G0014784)	Tfap2b (MGP_SPRETEiJ_G0014785)	MGP_SPRETEiJ_G0014786	Il17a (MGP_SPRETEiJ_G0014787)	Il17f (MGP_SPRETEiJ_G0014788)	Mcm3 (MGP_SPRETEiJ_G0014789)	Paqr8 (MGP_SPRETEiJ_G0014790)
Mouse	MODERN SPECIES		Tram1 (ENSMUSG00000025935)	Lactb2 (ENSMUSG00000025937)	Xkr9 (ENSMUSG00000067813)	Eya1 (ENSMUSG00000025932)	Msc (ENSMUSG00000025930)	Trpa1 (ENSMUSG00000032769) #10	Kcnb2 (ENSMUSG00000092083) #12	Terf1 (ENSMUSG00000025925) #14	Sbspon (ENSMUSG00000032719) #15	4930444P10Rik (ENSMUSG00000067795) #16	Rpl7 (ENSMUSG00000043716) #17	Rdh10 (ENSMUSG00000025921) #18	Stau2 (ENSMUSG00000025920) #19	Ube2w (ENSMUSG00000025939) #20	Eloc (ENSMUSG00000079658) #21	Tmem70 (ENSMUSG00000025940) #22	Ly96 (ENSMUSG00000025779) #23	Jph1 (ENSMUSG00000042686)	Gdap1 (ENSMUSG00000025777)	Pi15 (ENSMUSG00000067780)	Crispld1 (ENSMUSG00000025776)	Crisp4 (ENSMUSG00000025774)	Defb18 (ENSMUSG00000073735)	Defb41 (ENSMUSG00000067773)	Tfap2d (ENSMUSG00000042596)	Tfap2b (ENSMUSG00000025927)	Pkhd1 (ENSMUSG00000043760)	Il17a (ENSMUSG00000025929)	Il17f (ENSMUSG00000041872)	Mcm3 (ENSMUSG00000041859)	Paqr8 (ENSMUSG00000025931)
Ryukyu mouse	MODERN SPECIES		Tram1 (MGP_CAROLIEiJ_G0013955)	Lactb2 (MGP_CAROLIEiJ_G0013956)	Xkr9 (MGP_CAROLIEiJ_G0013957)	Eya1 (MGP_CAROLIEiJ_G0013958)	Msc (MGP_CAROLIEiJ_G0013959)	Trpa1 (MGP_CAROLIEiJ_G0013960) #10	Kcnb2 (MGP_CAROLIEiJ_G0013961) #12	Terf1 (MGP_CAROLIEiJ_G0013962) #14	Sbspon (MGP_CAROLIEiJ_G0013963) #15	4930444P10Rik (MGP_CAROLIEiJ_G0013964) #16	Rpl7 (MGP_CAROLIEiJ_G0013965) #17	Rdh10 (MGP_CAROLIEiJ_G0013966) #18	Stau2 (MGP_CAROLIEiJ_G0013967) #19	MGP_CAROLIEiJ_G0013968 #20	Eloc (MGP_CAROLIEiJ_G0013969) #21	Tmem70 (MGP_CAROLIEiJ_G0013970) #22	Ly96 (MGP_CAROLIEiJ_G0013971) #23	Jph1 (MGP_CAROLIEiJ_G0013972)	Gdap1 (MGP_CAROLIEiJ_G0013973)	Pi15 (MGP_CAROLIEiJ_G0013974)	Crispld1 (MGP_CAROLIEiJ_G0013975)	Crisp4 (MGP_CAROLIEiJ_G0013976)	Defb18 (MGP_CAROLIEiJ_G0013977)	Defb41 (MGP_CAROLIEiJ_G0013978)	Tfap2d (MGP_CAROLIEiJ_G0013979)	Tfap2b (MGP_CAROLIEiJ_G0013980)	Pkhd1 (MGP_CAROLIEiJ_G0013981)	Il17a (MGP_CAROLIEiJ_G0013982)	Il17f (MGP_CAROLIEiJ_G0013983)	Mcm3 (MGP_CAROLIEiJ_G0013984)	Paqr8 (MGP_CAROLIEiJ_G0013985)
Shrew mouse	MODERN SPECIES	14	Tram1 (MGP_PahariEiJ_G0023864)	Lactb2 (MGP_PahariEiJ_G0023863)	Xkr9 (MGP_PahariEiJ_G0023862)	Eya1 (MGP_PahariEiJ_G0023861)	Msc (MGP_PahariEiJ_G0023860)	Trpa1 (MGP_PahariEiJ_G0023859) #10	Kcnb2 (MGP_PahariEiJ_G0023858) #12	Terf1 (MGP_PahariEiJ_G0023857) #14	Sbspon (MGP_PahariEiJ_G0023856) #15	MGP_PahariEiJ_G0023855 #16	Rpl7 (MGP_PahariEiJ_G0023854) #17	Rdh10 (MGP_PahariEiJ_G0023853) #18	Stau2 (MGP_PahariEiJ_G0023852) #19	MGP_PahariEiJ_G0023851 #20	MGP_PahariEiJ_G0023850	Tmem70 (MGP_PahariEiJ_G0023849) #22	Ly96 (MGP_PahariEiJ_G0023848) #23	Jph1 (MGP_PahariEiJ_G0023847)	Gdap1 (MGP_PahariEiJ_G0023846)	Pi15 (MGP_PahariEiJ_G0023845)	Crispld1 (MGP_PahariEiJ_G0023844)